Multiple sequence alignment - TraesCS6B01G134500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G134500 chr6B 100.000 2249 0 0 1 2249 131762600 131760352 0.000000e+00 4154
1 TraesCS6B01G134500 chr6B 96.983 464 14 0 4 467 257915067 257915530 0.000000e+00 780
2 TraesCS6B01G134500 chr6B 96.567 466 15 1 3 467 258505198 258504733 0.000000e+00 771
3 TraesCS6B01G134500 chr6B 88.565 446 32 3 462 907 670366955 670367381 7.120000e-145 523
4 TraesCS6B01G134500 chr5A 95.710 1352 54 3 899 2249 554348136 554349484 0.000000e+00 2172
5 TraesCS6B01G134500 chr5A 94.601 1352 69 3 899 2249 560882910 560881562 0.000000e+00 2089
6 TraesCS6B01G134500 chr5A 89.910 446 26 2 462 907 560884050 560883624 7.020000e-155 556
7 TraesCS6B01G134500 chr6A 94.601 1352 69 3 899 2249 508001467 508002815 0.000000e+00 2089
8 TraesCS6B01G134500 chr6A 90.293 443 24 2 462 904 518947492 518947915 1.510000e-156 562
9 TraesCS6B01G134500 chr6A 89.933 447 26 2 461 907 349779255 349779682 1.950000e-155 558
10 TraesCS6B01G134500 chr6A 89.842 443 26 3 462 904 508000289 508000712 3.260000e-153 551
11 TraesCS6B01G134500 chr2A 94.305 1352 73 3 899 2249 94222712 94224060 0.000000e+00 2067
12 TraesCS6B01G134500 chr2A 94.828 812 38 3 899 1709 65085421 65086229 0.000000e+00 1264
13 TraesCS6B01G134500 chr2A 87.000 300 19 4 462 761 94207562 94207841 1.000000e-83 320
14 TraesCS6B01G134500 chr3A 93.713 1352 74 6 899 2249 50436122 50437463 0.000000e+00 2015
15 TraesCS6B01G134500 chr3A 90.583 446 23 2 462 907 50434947 50435373 6.970000e-160 573
16 TraesCS6B01G134500 chr3A 90.359 446 24 2 462 907 657439126 657439552 3.240000e-158 568
17 TraesCS6B01G134500 chr1A 92.899 1352 78 7 899 2249 527083410 527082076 0.000000e+00 1949
18 TraesCS6B01G134500 chr1A 90.359 446 24 2 462 907 527084587 527084161 3.240000e-158 568
19 TraesCS6B01G134500 chr7A 94.585 1071 54 3 899 1968 724637084 724638151 0.000000e+00 1653
20 TraesCS6B01G134500 chr7A 90.583 446 23 2 462 907 724635948 724636374 6.970000e-160 573
21 TraesCS6B01G134500 chr7A 92.486 346 21 3 899 1243 658722789 658723130 7.220000e-135 490
22 TraesCS6B01G134500 chr1B 94.551 1046 55 2 1204 2249 552389898 552388855 0.000000e+00 1615
23 TraesCS6B01G134500 chr1B 96.559 465 16 0 3 467 466861985 466861521 0.000000e+00 771
24 TraesCS6B01G134500 chr2D 95.618 890 39 0 1360 2249 464801694 464800805 0.000000e+00 1428
25 TraesCS6B01G134500 chr6D 95.594 749 25 4 899 1646 196358515 196359256 0.000000e+00 1194
26 TraesCS6B01G134500 chr6D 91.704 446 18 2 462 907 196357337 196357763 3.200000e-168 601
27 TraesCS6B01G134500 chr7B 96.989 465 14 0 3 467 596375057 596375521 0.000000e+00 782
28 TraesCS6B01G134500 chr7B 96.795 468 12 2 3 467 329868319 329867852 0.000000e+00 778
29 TraesCS6B01G134500 chr7B 96.767 464 14 1 4 467 70020865 70021327 0.000000e+00 773
30 TraesCS6B01G134500 chr3B 96.767 464 15 0 4 467 279723788 279723325 0.000000e+00 774
31 TraesCS6B01G134500 chr3B 96.559 465 16 0 3 467 67451975 67451511 0.000000e+00 771
32 TraesCS6B01G134500 chr3B 96.559 465 16 0 3 467 181478857 181478393 0.000000e+00 771
33 TraesCS6B01G134500 chr5B 89.781 411 32 4 503 907 27506901 27507307 3.310000e-143 518


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G134500 chr6B 131760352 131762600 2248 True 4154.0 4154 100.0000 1 2249 1 chr6B.!!$R1 2248
1 TraesCS6B01G134500 chr5A 554348136 554349484 1348 False 2172.0 2172 95.7100 899 2249 1 chr5A.!!$F1 1350
2 TraesCS6B01G134500 chr5A 560881562 560884050 2488 True 1322.5 2089 92.2555 462 2249 2 chr5A.!!$R1 1787
3 TraesCS6B01G134500 chr6A 508000289 508002815 2526 False 1320.0 2089 92.2215 462 2249 2 chr6A.!!$F3 1787
4 TraesCS6B01G134500 chr2A 94222712 94224060 1348 False 2067.0 2067 94.3050 899 2249 1 chr2A.!!$F3 1350
5 TraesCS6B01G134500 chr2A 65085421 65086229 808 False 1264.0 1264 94.8280 899 1709 1 chr2A.!!$F1 810
6 TraesCS6B01G134500 chr3A 50434947 50437463 2516 False 1294.0 2015 92.1480 462 2249 2 chr3A.!!$F2 1787
7 TraesCS6B01G134500 chr1A 527082076 527084587 2511 True 1258.5 1949 91.6290 462 2249 2 chr1A.!!$R1 1787
8 TraesCS6B01G134500 chr7A 724635948 724638151 2203 False 1113.0 1653 92.5840 462 1968 2 chr7A.!!$F2 1506
9 TraesCS6B01G134500 chr1B 552388855 552389898 1043 True 1615.0 1615 94.5510 1204 2249 1 chr1B.!!$R2 1045
10 TraesCS6B01G134500 chr2D 464800805 464801694 889 True 1428.0 1428 95.6180 1360 2249 1 chr2D.!!$R1 889
11 TraesCS6B01G134500 chr6D 196357337 196359256 1919 False 897.5 1194 93.6490 462 1646 2 chr6D.!!$F1 1184

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.108138 AGCTCGAACCCAAATCGGAG 60.108 55.0 0.0 0.0 40.59 4.63 F
75 76 0.108329 GCTCGAACCCAAATCGGAGA 60.108 55.0 0.0 0.0 45.75 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1212 1975 1.150567 CCAAGAGCGCGGAGAGAATG 61.151 60.0 8.83 0.0 0.0 2.67 R
1387 2150 1.648467 GAACAGAAGGCGGCACATCC 61.648 60.0 13.08 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.656480 TGGTTTCTTAAAGTTTGGAGTTGC 58.344 37.500 0.00 0.00 0.00 4.17
24 25 4.738252 GGTTTCTTAAAGTTTGGAGTTGCG 59.262 41.667 0.00 0.00 0.00 4.85
25 26 5.449451 GGTTTCTTAAAGTTTGGAGTTGCGA 60.449 40.000 0.00 0.00 0.00 5.10
26 27 6.206498 GTTTCTTAAAGTTTGGAGTTGCGAT 58.794 36.000 0.00 0.00 0.00 4.58
27 28 5.356882 TCTTAAAGTTTGGAGTTGCGATG 57.643 39.130 0.00 0.00 0.00 3.84
28 29 2.422276 AAAGTTTGGAGTTGCGATGC 57.578 45.000 0.00 0.00 0.00 3.91
29 30 1.609208 AAGTTTGGAGTTGCGATGCT 58.391 45.000 0.00 0.00 0.00 3.79
30 31 1.609208 AGTTTGGAGTTGCGATGCTT 58.391 45.000 0.00 0.00 0.00 3.91
31 32 2.778299 AGTTTGGAGTTGCGATGCTTA 58.222 42.857 0.00 0.00 0.00 3.09
32 33 3.347216 AGTTTGGAGTTGCGATGCTTAT 58.653 40.909 0.00 0.00 0.00 1.73
33 34 3.127548 AGTTTGGAGTTGCGATGCTTATG 59.872 43.478 0.00 0.00 0.00 1.90
34 35 2.401583 TGGAGTTGCGATGCTTATGT 57.598 45.000 0.00 0.00 0.00 2.29
35 36 2.009051 TGGAGTTGCGATGCTTATGTG 58.991 47.619 0.00 0.00 0.00 3.21
36 37 2.279741 GGAGTTGCGATGCTTATGTGA 58.720 47.619 0.00 0.00 0.00 3.58
37 38 2.677836 GGAGTTGCGATGCTTATGTGAA 59.322 45.455 0.00 0.00 0.00 3.18
38 39 3.126858 GGAGTTGCGATGCTTATGTGAAA 59.873 43.478 0.00 0.00 0.00 2.69
39 40 4.379394 GGAGTTGCGATGCTTATGTGAAAA 60.379 41.667 0.00 0.00 0.00 2.29
40 41 5.119931 AGTTGCGATGCTTATGTGAAAAA 57.880 34.783 0.00 0.00 0.00 1.94
61 62 6.817765 AAAAATTCAACCTGATAAGCTCGA 57.182 33.333 0.00 0.00 0.00 4.04
62 63 6.817765 AAAATTCAACCTGATAAGCTCGAA 57.182 33.333 0.00 0.00 0.00 3.71
63 64 5.803020 AATTCAACCTGATAAGCTCGAAC 57.197 39.130 0.00 0.00 0.00 3.95
64 65 3.247006 TCAACCTGATAAGCTCGAACC 57.753 47.619 0.00 0.00 0.00 3.62
65 66 2.093658 TCAACCTGATAAGCTCGAACCC 60.094 50.000 0.00 0.00 0.00 4.11
66 67 1.568504 ACCTGATAAGCTCGAACCCA 58.431 50.000 0.00 0.00 0.00 4.51
67 68 1.906574 ACCTGATAAGCTCGAACCCAA 59.093 47.619 0.00 0.00 0.00 4.12
68 69 2.304761 ACCTGATAAGCTCGAACCCAAA 59.695 45.455 0.00 0.00 0.00 3.28
69 70 3.054361 ACCTGATAAGCTCGAACCCAAAT 60.054 43.478 0.00 0.00 0.00 2.32
70 71 3.561725 CCTGATAAGCTCGAACCCAAATC 59.438 47.826 0.00 0.00 0.00 2.17
71 72 3.194861 TGATAAGCTCGAACCCAAATCG 58.805 45.455 0.00 0.00 41.53 3.34
72 73 2.018542 TAAGCTCGAACCCAAATCGG 57.981 50.000 0.00 0.00 40.59 4.18
73 74 0.323629 AAGCTCGAACCCAAATCGGA 59.676 50.000 0.00 0.00 40.59 4.55
74 75 0.108138 AGCTCGAACCCAAATCGGAG 60.108 55.000 0.00 0.00 40.59 4.63
75 76 0.108329 GCTCGAACCCAAATCGGAGA 60.108 55.000 0.00 0.00 45.75 3.71
76 77 1.674817 GCTCGAACCCAAATCGGAGAA 60.675 52.381 0.00 0.00 43.58 2.87
77 78 2.695359 CTCGAACCCAAATCGGAGAAA 58.305 47.619 0.00 0.00 43.58 2.52
78 79 3.270877 CTCGAACCCAAATCGGAGAAAT 58.729 45.455 0.00 0.00 43.58 2.17
79 80 3.681593 TCGAACCCAAATCGGAGAAATT 58.318 40.909 0.00 0.00 43.58 1.82
80 81 4.076394 TCGAACCCAAATCGGAGAAATTT 58.924 39.130 0.00 0.00 43.58 1.82
81 82 4.083003 TCGAACCCAAATCGGAGAAATTTG 60.083 41.667 0.00 2.38 43.58 2.32
82 83 4.320935 CGAACCCAAATCGGAGAAATTTGT 60.321 41.667 0.00 0.00 43.58 2.83
83 84 4.783764 ACCCAAATCGGAGAAATTTGTC 57.216 40.909 6.79 6.79 43.58 3.18
84 85 4.407365 ACCCAAATCGGAGAAATTTGTCT 58.593 39.130 14.34 0.00 43.58 3.41
85 86 4.832823 ACCCAAATCGGAGAAATTTGTCTT 59.167 37.500 14.34 0.00 43.58 3.01
86 87 5.048013 ACCCAAATCGGAGAAATTTGTCTTC 60.048 40.000 14.34 0.00 43.58 2.87
87 88 5.048083 CCCAAATCGGAGAAATTTGTCTTCA 60.048 40.000 14.34 0.56 43.58 3.02
88 89 6.350445 CCCAAATCGGAGAAATTTGTCTTCAT 60.350 38.462 14.34 2.70 43.58 2.57
89 90 7.148086 CCCAAATCGGAGAAATTTGTCTTCATA 60.148 37.037 14.34 0.00 43.58 2.15
90 91 7.912250 CCAAATCGGAGAAATTTGTCTTCATAG 59.088 37.037 14.34 2.82 43.58 2.23
91 92 7.559590 AATCGGAGAAATTTGTCTTCATAGG 57.440 36.000 14.34 0.00 43.58 2.57
92 93 6.294361 TCGGAGAAATTTGTCTTCATAGGA 57.706 37.500 14.34 0.39 0.00 2.94
93 94 6.889198 TCGGAGAAATTTGTCTTCATAGGAT 58.111 36.000 14.34 0.00 0.00 3.24
94 95 8.018537 TCGGAGAAATTTGTCTTCATAGGATA 57.981 34.615 14.34 0.00 0.00 2.59
95 96 7.926555 TCGGAGAAATTTGTCTTCATAGGATAC 59.073 37.037 14.34 0.00 0.00 2.24
96 97 7.171678 CGGAGAAATTTGTCTTCATAGGATACC 59.828 40.741 14.34 0.00 37.17 2.73
97 98 7.445707 GGAGAAATTTGTCTTCATAGGATACCC 59.554 40.741 14.34 0.00 37.17 3.69
98 99 7.872138 AGAAATTTGTCTTCATAGGATACCCA 58.128 34.615 0.00 0.00 33.88 4.51
99 100 8.336235 AGAAATTTGTCTTCATAGGATACCCAA 58.664 33.333 0.00 0.00 33.88 4.12
100 101 8.893563 AAATTTGTCTTCATAGGATACCCAAA 57.106 30.769 0.00 0.00 33.88 3.28
101 102 8.525290 AATTTGTCTTCATAGGATACCCAAAG 57.475 34.615 0.00 0.00 33.88 2.77
102 103 5.630415 TGTCTTCATAGGATACCCAAAGG 57.370 43.478 0.00 0.00 40.04 3.11
103 104 5.285401 TGTCTTCATAGGATACCCAAAGGA 58.715 41.667 0.00 0.00 36.73 3.36
104 105 5.729229 TGTCTTCATAGGATACCCAAAGGAA 59.271 40.000 0.00 0.00 36.73 3.36
105 106 6.216662 TGTCTTCATAGGATACCCAAAGGAAA 59.783 38.462 0.00 0.00 36.73 3.13
106 107 6.542735 GTCTTCATAGGATACCCAAAGGAAAC 59.457 42.308 0.00 0.00 36.73 2.78
107 108 6.447084 TCTTCATAGGATACCCAAAGGAAACT 59.553 38.462 0.00 0.00 37.26 2.66
108 109 6.001449 TCATAGGATACCCAAAGGAAACTG 57.999 41.667 0.00 0.00 36.06 3.16
109 110 5.491078 TCATAGGATACCCAAAGGAAACTGT 59.509 40.000 0.00 0.00 36.06 3.55
110 111 4.741928 AGGATACCCAAAGGAAACTGTT 57.258 40.909 0.00 0.00 36.06 3.16
111 112 4.407365 AGGATACCCAAAGGAAACTGTTG 58.593 43.478 0.00 0.00 36.06 3.33
112 113 3.509967 GGATACCCAAAGGAAACTGTTGG 59.490 47.826 0.00 0.00 42.68 3.77
117 118 3.292460 CCAAAGGAAACTGTTGGGTACA 58.708 45.455 0.00 0.00 42.68 2.90
118 119 3.067601 CCAAAGGAAACTGTTGGGTACAC 59.932 47.826 0.00 0.00 42.68 2.90
119 120 2.651382 AGGAAACTGTTGGGTACACC 57.349 50.000 0.00 0.00 41.13 4.16
120 121 2.132686 AGGAAACTGTTGGGTACACCT 58.867 47.619 0.00 0.00 41.13 4.00
121 122 2.512476 AGGAAACTGTTGGGTACACCTT 59.488 45.455 0.00 0.00 41.13 3.50
122 123 2.882761 GGAAACTGTTGGGTACACCTTC 59.117 50.000 0.00 0.00 41.11 3.46
123 124 3.434596 GGAAACTGTTGGGTACACCTTCT 60.435 47.826 0.00 0.00 41.11 2.85
124 125 4.202388 GGAAACTGTTGGGTACACCTTCTA 60.202 45.833 0.00 0.00 41.11 2.10
125 126 5.514310 GGAAACTGTTGGGTACACCTTCTAT 60.514 44.000 0.00 0.00 41.11 1.98
126 127 4.820894 ACTGTTGGGTACACCTTCTATC 57.179 45.455 0.00 0.00 41.11 2.08
127 128 4.164981 ACTGTTGGGTACACCTTCTATCA 58.835 43.478 0.00 0.00 41.11 2.15
128 129 4.020485 ACTGTTGGGTACACCTTCTATCAC 60.020 45.833 0.00 0.00 41.11 3.06
129 130 3.904965 TGTTGGGTACACCTTCTATCACA 59.095 43.478 0.00 0.00 41.11 3.58
130 131 4.020573 TGTTGGGTACACCTTCTATCACAG 60.021 45.833 0.00 0.00 41.11 3.66
131 132 4.055710 TGGGTACACCTTCTATCACAGA 57.944 45.455 0.00 0.00 41.11 3.41
132 133 4.620723 TGGGTACACCTTCTATCACAGAT 58.379 43.478 0.00 0.00 41.11 2.90
133 134 4.649674 TGGGTACACCTTCTATCACAGATC 59.350 45.833 0.00 0.00 41.11 2.75
134 135 4.039366 GGGTACACCTTCTATCACAGATCC 59.961 50.000 0.00 0.00 35.85 3.36
135 136 4.261656 GGTACACCTTCTATCACAGATCCG 60.262 50.000 0.00 0.00 31.77 4.18
136 137 3.632333 ACACCTTCTATCACAGATCCGA 58.368 45.455 0.00 0.00 31.77 4.55
137 138 4.023980 ACACCTTCTATCACAGATCCGAA 58.976 43.478 0.00 0.00 31.77 4.30
138 139 4.098654 ACACCTTCTATCACAGATCCGAAG 59.901 45.833 9.92 9.92 31.77 3.79
151 152 2.840974 CCGAAGGCAAGACATTCGT 58.159 52.632 10.90 0.00 46.14 3.85
152 153 1.156736 CCGAAGGCAAGACATTCGTT 58.843 50.000 10.90 0.00 46.14 3.85
153 154 1.135972 CCGAAGGCAAGACATTCGTTG 60.136 52.381 10.90 0.00 46.14 4.10
154 155 1.725931 CGAAGGCAAGACATTCGTTGC 60.726 52.381 4.49 0.00 46.88 4.17
157 158 3.863681 GCAAGACATTCGTTGCCAA 57.136 47.368 0.00 0.00 42.73 4.52
158 159 1.689959 GCAAGACATTCGTTGCCAAG 58.310 50.000 0.00 0.00 42.73 3.61
159 160 1.266718 GCAAGACATTCGTTGCCAAGA 59.733 47.619 0.00 0.00 42.73 3.02
160 161 2.287547 GCAAGACATTCGTTGCCAAGAA 60.288 45.455 0.00 0.00 42.73 2.52
161 162 3.612479 GCAAGACATTCGTTGCCAAGAAT 60.612 43.478 0.00 0.00 42.73 2.40
180 181 7.790027 CAAGAATGGATCCTTTCTAGAGAAGA 58.210 38.462 32.25 2.94 38.80 2.87
181 182 7.986553 AGAATGGATCCTTTCTAGAGAAGAA 57.013 36.000 31.52 1.37 42.62 2.52
182 183 8.021898 AGAATGGATCCTTTCTAGAGAAGAAG 57.978 38.462 31.52 5.81 44.95 2.85
183 184 7.623278 AGAATGGATCCTTTCTAGAGAAGAAGT 59.377 37.037 31.52 11.30 44.95 3.01
184 185 7.747809 ATGGATCCTTTCTAGAGAAGAAGTT 57.252 36.000 14.23 0.00 44.95 2.66
185 186 7.560796 TGGATCCTTTCTAGAGAAGAAGTTT 57.439 36.000 14.23 0.00 44.95 2.66
186 187 7.616313 TGGATCCTTTCTAGAGAAGAAGTTTC 58.384 38.462 14.23 5.20 44.95 2.78
187 188 7.456269 TGGATCCTTTCTAGAGAAGAAGTTTCT 59.544 37.037 14.23 0.00 44.95 2.52
188 189 7.763985 GGATCCTTTCTAGAGAAGAAGTTTCTG 59.236 40.741 3.84 0.00 44.95 3.02
189 190 7.604657 TCCTTTCTAGAGAAGAAGTTTCTGT 57.395 36.000 13.17 0.00 44.95 3.41
190 191 7.662897 TCCTTTCTAGAGAAGAAGTTTCTGTC 58.337 38.462 13.17 0.00 44.95 3.51
191 192 6.584563 CCTTTCTAGAGAAGAAGTTTCTGTCG 59.415 42.308 13.17 0.00 44.95 4.35
192 193 6.879276 TTCTAGAGAAGAAGTTTCTGTCGA 57.121 37.500 0.00 0.00 39.36 4.20
193 194 6.879276 TCTAGAGAAGAAGTTTCTGTCGAA 57.121 37.500 0.00 0.00 37.65 3.71
194 195 7.273320 TCTAGAGAAGAAGTTTCTGTCGAAA 57.727 36.000 0.00 0.00 37.65 3.46
195 196 7.364200 TCTAGAGAAGAAGTTTCTGTCGAAAG 58.636 38.462 0.00 0.00 39.65 2.62
196 197 6.150396 AGAGAAGAAGTTTCTGTCGAAAGA 57.850 37.500 0.00 0.00 39.65 2.52
197 198 6.574350 AGAGAAGAAGTTTCTGTCGAAAGAA 58.426 36.000 14.22 14.22 39.65 2.52
198 199 6.699642 AGAGAAGAAGTTTCTGTCGAAAGAAG 59.300 38.462 17.29 0.00 39.65 2.85
199 200 6.342111 AGAAGAAGTTTCTGTCGAAAGAAGT 58.658 36.000 17.29 7.23 39.65 3.01
200 201 5.975410 AGAAGTTTCTGTCGAAAGAAGTG 57.025 39.130 17.29 0.00 45.01 3.16
201 202 5.661458 AGAAGTTTCTGTCGAAAGAAGTGA 58.339 37.500 17.29 1.17 45.01 3.41
202 203 5.751028 AGAAGTTTCTGTCGAAAGAAGTGAG 59.249 40.000 17.29 0.00 45.01 3.51
203 204 5.012328 AGTTTCTGTCGAAAGAAGTGAGT 57.988 39.130 17.29 4.30 45.01 3.41
204 205 4.806247 AGTTTCTGTCGAAAGAAGTGAGTG 59.194 41.667 17.29 0.00 45.01 3.51
205 206 3.371102 TCTGTCGAAAGAAGTGAGTGG 57.629 47.619 1.77 0.00 45.01 4.00
206 207 2.035961 TCTGTCGAAAGAAGTGAGTGGG 59.964 50.000 1.77 0.00 45.01 4.61
207 208 2.035961 CTGTCGAAAGAAGTGAGTGGGA 59.964 50.000 0.00 0.00 45.01 4.37
208 209 2.035961 TGTCGAAAGAAGTGAGTGGGAG 59.964 50.000 0.00 0.00 45.01 4.30
209 210 2.296471 GTCGAAAGAAGTGAGTGGGAGA 59.704 50.000 0.00 0.00 45.01 3.71
210 211 2.963101 TCGAAAGAAGTGAGTGGGAGAA 59.037 45.455 0.00 0.00 37.03 2.87
211 212 3.386726 TCGAAAGAAGTGAGTGGGAGAAA 59.613 43.478 0.00 0.00 37.03 2.52
212 213 4.127171 CGAAAGAAGTGAGTGGGAGAAAA 58.873 43.478 0.00 0.00 0.00 2.29
213 214 4.212214 CGAAAGAAGTGAGTGGGAGAAAAG 59.788 45.833 0.00 0.00 0.00 2.27
214 215 4.779993 AAGAAGTGAGTGGGAGAAAAGT 57.220 40.909 0.00 0.00 0.00 2.66
215 216 5.888982 AAGAAGTGAGTGGGAGAAAAGTA 57.111 39.130 0.00 0.00 0.00 2.24
216 217 5.476091 AGAAGTGAGTGGGAGAAAAGTAG 57.524 43.478 0.00 0.00 0.00 2.57
217 218 5.148502 AGAAGTGAGTGGGAGAAAAGTAGA 58.851 41.667 0.00 0.00 0.00 2.59
218 219 5.602978 AGAAGTGAGTGGGAGAAAAGTAGAA 59.397 40.000 0.00 0.00 0.00 2.10
219 220 5.216614 AGTGAGTGGGAGAAAAGTAGAAC 57.783 43.478 0.00 0.00 0.00 3.01
220 221 4.902448 AGTGAGTGGGAGAAAAGTAGAACT 59.098 41.667 0.00 0.00 0.00 3.01
221 222 5.367060 AGTGAGTGGGAGAAAAGTAGAACTT 59.633 40.000 0.00 0.00 40.80 2.66
222 223 5.467063 GTGAGTGGGAGAAAAGTAGAACTTG 59.533 44.000 0.00 0.00 38.66 3.16
223 224 5.365605 TGAGTGGGAGAAAAGTAGAACTTGA 59.634 40.000 0.00 0.00 38.66 3.02
224 225 6.043243 TGAGTGGGAGAAAAGTAGAACTTGAT 59.957 38.462 0.00 0.00 38.66 2.57
225 226 6.234177 AGTGGGAGAAAAGTAGAACTTGATG 58.766 40.000 0.00 0.00 38.66 3.07
226 227 6.043243 AGTGGGAGAAAAGTAGAACTTGATGA 59.957 38.462 0.00 0.00 38.66 2.92
227 228 6.370166 GTGGGAGAAAAGTAGAACTTGATGAG 59.630 42.308 0.00 0.00 38.66 2.90
228 229 5.877564 GGGAGAAAAGTAGAACTTGATGAGG 59.122 44.000 0.00 0.00 38.66 3.86
229 230 6.468543 GGAGAAAAGTAGAACTTGATGAGGT 58.531 40.000 0.00 0.00 38.66 3.85
230 231 7.310485 GGGAGAAAAGTAGAACTTGATGAGGTA 60.310 40.741 0.00 0.00 38.66 3.08
231 232 8.095169 GGAGAAAAGTAGAACTTGATGAGGTAA 58.905 37.037 0.00 0.00 38.66 2.85
232 233 9.660180 GAGAAAAGTAGAACTTGATGAGGTAAT 57.340 33.333 0.00 0.00 38.66 1.89
250 251 6.416631 GGTAATAGTACCTTCTCCCGAATT 57.583 41.667 12.14 0.00 45.72 2.17
251 252 6.221659 GGTAATAGTACCTTCTCCCGAATTG 58.778 44.000 12.14 0.00 45.72 2.32
252 253 4.957684 ATAGTACCTTCTCCCGAATTGG 57.042 45.455 0.00 0.00 37.55 3.16
253 254 2.829023 AGTACCTTCTCCCGAATTGGA 58.171 47.619 0.00 0.00 42.00 3.53
254 255 3.178865 AGTACCTTCTCCCGAATTGGAA 58.821 45.455 0.00 0.00 42.00 3.53
255 256 3.585732 AGTACCTTCTCCCGAATTGGAAA 59.414 43.478 0.00 0.00 42.00 3.13
256 257 3.518992 ACCTTCTCCCGAATTGGAAAA 57.481 42.857 0.00 0.00 42.00 2.29
257 258 4.047627 ACCTTCTCCCGAATTGGAAAAT 57.952 40.909 0.00 0.00 42.00 1.82
258 259 5.187621 ACCTTCTCCCGAATTGGAAAATA 57.812 39.130 0.00 0.00 42.00 1.40
259 260 5.193679 ACCTTCTCCCGAATTGGAAAATAG 58.806 41.667 0.00 0.00 42.00 1.73
260 261 5.193679 CCTTCTCCCGAATTGGAAAATAGT 58.806 41.667 0.00 0.00 42.00 2.12
261 262 5.652452 CCTTCTCCCGAATTGGAAAATAGTT 59.348 40.000 0.00 0.00 42.00 2.24
262 263 6.183360 CCTTCTCCCGAATTGGAAAATAGTTC 60.183 42.308 0.00 0.00 42.00 3.01
263 264 5.811190 TCTCCCGAATTGGAAAATAGTTCA 58.189 37.500 0.00 0.00 42.00 3.18
264 265 6.423182 TCTCCCGAATTGGAAAATAGTTCAT 58.577 36.000 0.00 0.00 42.00 2.57
265 266 6.542370 TCTCCCGAATTGGAAAATAGTTCATC 59.458 38.462 0.00 0.00 42.00 2.92
266 267 6.184068 TCCCGAATTGGAAAATAGTTCATCA 58.816 36.000 0.00 0.00 42.00 3.07
267 268 6.094881 TCCCGAATTGGAAAATAGTTCATCAC 59.905 38.462 0.00 0.00 42.00 3.06
268 269 6.095440 CCCGAATTGGAAAATAGTTCATCACT 59.905 38.462 0.00 0.00 42.00 3.41
269 270 6.968904 CCGAATTGGAAAATAGTTCATCACTG 59.031 38.462 0.00 0.00 42.00 3.66
270 271 7.148255 CCGAATTGGAAAATAGTTCATCACTGA 60.148 37.037 0.00 0.00 42.00 3.41
271 272 8.236586 CGAATTGGAAAATAGTTCATCACTGAA 58.763 33.333 0.00 0.00 39.07 3.02
272 273 9.912634 GAATTGGAAAATAGTTCATCACTGAAA 57.087 29.630 0.00 0.00 42.85 2.69
275 276 8.634335 TGGAAAATAGTTCATCACTGAAATCA 57.366 30.769 0.00 0.00 42.85 2.57
289 290 5.557891 CTGAAATCAGTTCCAGTGATTCC 57.442 43.478 7.17 0.00 44.92 3.01
290 291 5.246981 TGAAATCAGTTCCAGTGATTCCT 57.753 39.130 7.17 0.00 44.92 3.36
291 292 6.373005 TGAAATCAGTTCCAGTGATTCCTA 57.627 37.500 7.17 0.00 44.92 2.94
292 293 6.173339 TGAAATCAGTTCCAGTGATTCCTAC 58.827 40.000 7.17 2.38 44.92 3.18
293 294 5.762179 AATCAGTTCCAGTGATTCCTACA 57.238 39.130 1.60 0.00 42.84 2.74
294 295 4.537135 TCAGTTCCAGTGATTCCTACAC 57.463 45.455 0.00 0.00 38.38 2.90
295 296 3.260884 TCAGTTCCAGTGATTCCTACACC 59.739 47.826 0.00 0.00 38.82 4.16
296 297 3.007940 CAGTTCCAGTGATTCCTACACCA 59.992 47.826 0.00 0.00 38.82 4.17
297 298 3.650942 AGTTCCAGTGATTCCTACACCAA 59.349 43.478 0.00 0.00 38.82 3.67
298 299 4.289672 AGTTCCAGTGATTCCTACACCAAT 59.710 41.667 0.00 0.00 38.82 3.16
299 300 4.927267 TCCAGTGATTCCTACACCAATT 57.073 40.909 0.00 0.00 38.82 2.32
300 301 6.012858 AGTTCCAGTGATTCCTACACCAATTA 60.013 38.462 0.00 0.00 38.82 1.40
301 302 5.989477 TCCAGTGATTCCTACACCAATTAG 58.011 41.667 0.00 0.00 38.82 1.73
302 303 5.487488 TCCAGTGATTCCTACACCAATTAGT 59.513 40.000 0.00 0.00 38.82 2.24
303 304 5.586243 CCAGTGATTCCTACACCAATTAGTG 59.414 44.000 2.21 2.21 43.65 2.74
304 305 6.406370 CAGTGATTCCTACACCAATTAGTGA 58.594 40.000 11.13 0.00 40.34 3.41
305 306 6.536582 CAGTGATTCCTACACCAATTAGTGAG 59.463 42.308 11.13 4.20 40.34 3.51
306 307 5.817816 GTGATTCCTACACCAATTAGTGAGG 59.182 44.000 11.13 12.14 40.34 3.86
307 308 5.724370 TGATTCCTACACCAATTAGTGAGGA 59.276 40.000 11.13 13.97 39.84 3.71
308 309 6.214615 TGATTCCTACACCAATTAGTGAGGAA 59.785 38.462 24.87 24.87 46.30 3.36
309 310 5.677319 TCCTACACCAATTAGTGAGGAAG 57.323 43.478 11.13 3.03 39.24 3.46
310 311 4.469945 TCCTACACCAATTAGTGAGGAAGG 59.530 45.833 11.13 10.81 39.24 3.46
311 312 4.225267 CCTACACCAATTAGTGAGGAAGGT 59.775 45.833 11.13 0.00 40.34 3.50
312 313 5.424252 CCTACACCAATTAGTGAGGAAGGTA 59.576 44.000 11.13 0.00 40.34 3.08
313 314 5.836024 ACACCAATTAGTGAGGAAGGTAA 57.164 39.130 11.13 0.00 40.34 2.85
314 315 6.388619 ACACCAATTAGTGAGGAAGGTAAT 57.611 37.500 11.13 0.00 40.34 1.89
315 316 6.180472 ACACCAATTAGTGAGGAAGGTAATG 58.820 40.000 11.13 0.00 40.34 1.90
316 317 6.012858 ACACCAATTAGTGAGGAAGGTAATGA 60.013 38.462 11.13 0.00 40.34 2.57
317 318 7.056635 CACCAATTAGTGAGGAAGGTAATGAT 58.943 38.462 0.00 0.00 40.34 2.45
318 319 7.012704 CACCAATTAGTGAGGAAGGTAATGATG 59.987 40.741 0.00 0.00 40.34 3.07
319 320 7.092444 ACCAATTAGTGAGGAAGGTAATGATGA 60.092 37.037 0.00 0.00 0.00 2.92
320 321 7.941238 CCAATTAGTGAGGAAGGTAATGATGAT 59.059 37.037 0.00 0.00 0.00 2.45
321 322 8.781196 CAATTAGTGAGGAAGGTAATGATGATG 58.219 37.037 0.00 0.00 0.00 3.07
322 323 7.675161 TTAGTGAGGAAGGTAATGATGATGA 57.325 36.000 0.00 0.00 0.00 2.92
323 324 6.760440 AGTGAGGAAGGTAATGATGATGAT 57.240 37.500 0.00 0.00 0.00 2.45
324 325 6.767456 AGTGAGGAAGGTAATGATGATGATC 58.233 40.000 0.00 0.00 0.00 2.92
325 326 6.328410 AGTGAGGAAGGTAATGATGATGATCA 59.672 38.462 0.00 0.00 42.92 2.92
327 328 7.119407 GTGAGGAAGGTAATGATGATGATCATG 59.881 40.741 14.30 0.00 46.79 3.07
328 329 7.016858 TGAGGAAGGTAATGATGATGATCATGA 59.983 37.037 14.30 4.76 46.79 3.07
329 330 7.752638 AGGAAGGTAATGATGATGATCATGAA 58.247 34.615 14.30 1.09 46.79 2.57
330 331 8.222637 AGGAAGGTAATGATGATGATCATGAAA 58.777 33.333 14.30 0.00 46.79 2.69
331 332 8.295288 GGAAGGTAATGATGATGATCATGAAAC 58.705 37.037 14.30 7.34 46.79 2.78
332 333 8.991783 AAGGTAATGATGATGATCATGAAACT 57.008 30.769 14.30 5.58 46.79 2.66
333 334 8.991783 AGGTAATGATGATGATCATGAAACTT 57.008 30.769 14.30 1.48 46.79 2.66
334 335 9.064706 AGGTAATGATGATGATCATGAAACTTC 57.935 33.333 14.30 6.96 46.79 3.01
335 336 8.843262 GGTAATGATGATGATCATGAAACTTCA 58.157 33.333 14.30 12.15 46.79 3.02
336 337 9.880064 GTAATGATGATGATCATGAAACTTCAG 57.120 33.333 14.30 0.00 46.79 3.02
337 338 8.747538 AATGATGATGATCATGAAACTTCAGA 57.252 30.769 14.30 12.45 46.79 3.27
338 339 8.926092 ATGATGATGATCATGAAACTTCAGAT 57.074 30.769 14.30 13.50 45.90 2.90
339 340 8.379457 TGATGATGATCATGAAACTTCAGATC 57.621 34.615 14.30 16.66 41.08 2.75
340 341 7.990886 TGATGATGATCATGAAACTTCAGATCA 59.009 33.333 14.30 22.53 45.09 2.92
341 342 8.747538 ATGATGATCATGAAACTTCAGATCAA 57.252 30.769 23.30 15.61 44.71 2.57
342 343 8.209917 TGATGATCATGAAACTTCAGATCAAG 57.790 34.615 23.30 0.00 44.71 3.02
343 344 7.827729 TGATGATCATGAAACTTCAGATCAAGT 59.172 33.333 23.30 15.45 44.71 3.16
344 345 7.991084 TGATCATGAAACTTCAGATCAAGTT 57.009 32.000 20.35 5.56 46.51 2.66
345 346 9.676861 ATGATCATGAAACTTCAGATCAAGTTA 57.323 29.630 23.30 11.18 44.28 2.24
346 347 8.939929 TGATCATGAAACTTCAGATCAAGTTAC 58.060 33.333 20.35 5.60 44.28 2.50
347 348 9.160496 GATCATGAAACTTCAGATCAAGTTACT 57.840 33.333 10.61 0.00 44.28 2.24
349 350 9.424319 TCATGAAACTTCAGATCAAGTTACTAC 57.576 33.333 10.61 5.45 44.28 2.73
350 351 9.208022 CATGAAACTTCAGATCAAGTTACTACA 57.792 33.333 10.61 9.40 44.28 2.74
351 352 8.818141 TGAAACTTCAGATCAAGTTACTACAG 57.182 34.615 10.61 0.00 44.28 2.74
352 353 8.638873 TGAAACTTCAGATCAAGTTACTACAGA 58.361 33.333 10.61 0.00 44.28 3.41
353 354 9.477484 GAAACTTCAGATCAAGTTACTACAGAA 57.523 33.333 10.61 0.00 44.28 3.02
354 355 8.819643 AACTTCAGATCAAGTTACTACAGAAC 57.180 34.615 8.92 0.00 43.43 3.01
355 356 7.379750 ACTTCAGATCAAGTTACTACAGAACC 58.620 38.462 0.00 0.00 32.34 3.62
356 357 6.282199 TCAGATCAAGTTACTACAGAACCC 57.718 41.667 0.00 0.00 0.00 4.11
357 358 5.187186 TCAGATCAAGTTACTACAGAACCCC 59.813 44.000 0.00 0.00 0.00 4.95
358 359 3.947910 TCAAGTTACTACAGAACCCCG 57.052 47.619 0.00 0.00 0.00 5.73
359 360 3.233507 TCAAGTTACTACAGAACCCCGT 58.766 45.455 0.00 0.00 0.00 5.28
360 361 4.406456 TCAAGTTACTACAGAACCCCGTA 58.594 43.478 0.00 0.00 0.00 4.02
361 362 4.460382 TCAAGTTACTACAGAACCCCGTAG 59.540 45.833 0.00 0.00 40.77 3.51
377 378 1.669779 CGTAGGTCTTCCAGAGTACGG 59.330 57.143 7.36 0.00 35.93 4.02
378 379 2.720915 GTAGGTCTTCCAGAGTACGGT 58.279 52.381 0.00 0.00 35.89 4.83
379 380 1.836802 AGGTCTTCCAGAGTACGGTC 58.163 55.000 0.00 0.00 35.89 4.79
380 381 1.075050 AGGTCTTCCAGAGTACGGTCA 59.925 52.381 0.00 0.00 35.89 4.02
381 382 1.473278 GGTCTTCCAGAGTACGGTCAG 59.527 57.143 0.00 0.00 0.00 3.51
382 383 1.135344 GTCTTCCAGAGTACGGTCAGC 60.135 57.143 0.00 0.00 0.00 4.26
383 384 0.888619 CTTCCAGAGTACGGTCAGCA 59.111 55.000 0.00 0.00 0.00 4.41
384 385 0.601558 TTCCAGAGTACGGTCAGCAC 59.398 55.000 0.00 0.00 0.00 4.40
385 386 1.215647 CCAGAGTACGGTCAGCACC 59.784 63.158 0.00 0.00 39.69 5.01
386 387 1.532604 CCAGAGTACGGTCAGCACCA 61.533 60.000 0.00 0.00 44.02 4.17
387 388 0.109086 CAGAGTACGGTCAGCACCAG 60.109 60.000 0.00 0.00 44.02 4.00
388 389 0.251209 AGAGTACGGTCAGCACCAGA 60.251 55.000 0.00 0.00 44.02 3.86
389 390 0.171455 GAGTACGGTCAGCACCAGAG 59.829 60.000 0.00 0.00 44.02 3.35
390 391 0.539901 AGTACGGTCAGCACCAGAGT 60.540 55.000 0.00 0.00 44.02 3.24
391 392 0.388649 GTACGGTCAGCACCAGAGTG 60.389 60.000 0.00 0.00 44.02 3.51
392 393 1.532604 TACGGTCAGCACCAGAGTGG 61.533 60.000 0.00 0.00 44.02 4.00
406 407 5.786264 CCAGAGTGGTACGTTAATCCTAT 57.214 43.478 0.00 0.00 31.35 2.57
407 408 6.158023 CCAGAGTGGTACGTTAATCCTATT 57.842 41.667 0.00 0.00 31.35 1.73
408 409 6.214399 CCAGAGTGGTACGTTAATCCTATTC 58.786 44.000 0.00 0.00 31.35 1.75
409 410 6.040616 CCAGAGTGGTACGTTAATCCTATTCT 59.959 42.308 0.00 0.00 31.35 2.40
410 411 6.918569 CAGAGTGGTACGTTAATCCTATTCTG 59.081 42.308 0.00 4.00 0.00 3.02
411 412 6.832384 AGAGTGGTACGTTAATCCTATTCTGA 59.168 38.462 0.00 0.00 0.00 3.27
412 413 7.341256 AGAGTGGTACGTTAATCCTATTCTGAA 59.659 37.037 0.00 0.00 0.00 3.02
413 414 7.844009 AGTGGTACGTTAATCCTATTCTGAAA 58.156 34.615 0.00 0.00 0.00 2.69
414 415 7.980099 AGTGGTACGTTAATCCTATTCTGAAAG 59.020 37.037 0.00 0.00 0.00 2.62
415 416 7.763071 GTGGTACGTTAATCCTATTCTGAAAGT 59.237 37.037 0.00 0.00 33.76 2.66
416 417 7.977853 TGGTACGTTAATCCTATTCTGAAAGTC 59.022 37.037 0.00 0.00 33.76 3.01
417 418 7.977853 GGTACGTTAATCCTATTCTGAAAGTCA 59.022 37.037 0.00 0.00 33.76 3.41
418 419 9.530633 GTACGTTAATCCTATTCTGAAAGTCAT 57.469 33.333 0.00 0.00 33.76 3.06
419 420 8.425577 ACGTTAATCCTATTCTGAAAGTCATG 57.574 34.615 0.00 0.00 33.76 3.07
420 421 8.041323 ACGTTAATCCTATTCTGAAAGTCATGT 58.959 33.333 0.00 0.00 33.76 3.21
421 422 8.883731 CGTTAATCCTATTCTGAAAGTCATGTT 58.116 33.333 0.00 0.00 33.76 2.71
427 428 9.475620 TCCTATTCTGAAAGTCATGTTACTAGA 57.524 33.333 0.00 0.00 33.76 2.43
428 429 9.522804 CCTATTCTGAAAGTCATGTTACTAGAC 57.477 37.037 0.00 0.81 33.76 2.59
429 430 9.522804 CTATTCTGAAAGTCATGTTACTAGACC 57.477 37.037 0.00 0.00 32.82 3.85
430 431 6.911250 TCTGAAAGTCATGTTACTAGACCA 57.089 37.500 0.00 0.00 32.82 4.02
431 432 7.482169 TCTGAAAGTCATGTTACTAGACCAT 57.518 36.000 0.00 0.00 32.82 3.55
432 433 7.323420 TCTGAAAGTCATGTTACTAGACCATG 58.677 38.462 0.00 5.78 37.82 3.66
433 434 7.178451 TCTGAAAGTCATGTTACTAGACCATGA 59.822 37.037 15.05 15.05 41.85 3.07
434 435 7.851228 TGAAAGTCATGTTACTAGACCATGAT 58.149 34.615 19.18 9.50 44.70 2.45
435 436 8.977412 TGAAAGTCATGTTACTAGACCATGATA 58.023 33.333 19.18 3.98 44.70 2.15
436 437 9.817809 GAAAGTCATGTTACTAGACCATGATAA 57.182 33.333 19.18 3.48 44.70 1.75
438 439 9.601217 AAGTCATGTTACTAGACCATGATAAAC 57.399 33.333 19.18 11.47 44.70 2.01
439 440 8.204836 AGTCATGTTACTAGACCATGATAAACC 58.795 37.037 19.18 10.87 44.70 3.27
440 441 8.204836 GTCATGTTACTAGACCATGATAAACCT 58.795 37.037 19.18 0.00 44.70 3.50
441 442 9.429109 TCATGTTACTAGACCATGATAAACCTA 57.571 33.333 15.05 0.00 39.87 3.08
442 443 9.477484 CATGTTACTAGACCATGATAAACCTAC 57.523 37.037 12.57 0.00 38.56 3.18
443 444 7.709947 TGTTACTAGACCATGATAAACCTACG 58.290 38.462 0.00 0.00 0.00 3.51
444 445 7.557358 TGTTACTAGACCATGATAAACCTACGA 59.443 37.037 0.00 0.00 0.00 3.43
445 446 8.408601 GTTACTAGACCATGATAAACCTACGAA 58.591 37.037 0.00 0.00 0.00 3.85
446 447 6.803642 ACTAGACCATGATAAACCTACGAAC 58.196 40.000 0.00 0.00 0.00 3.95
447 448 5.934402 AGACCATGATAAACCTACGAACT 57.066 39.130 0.00 0.00 0.00 3.01
448 449 7.776969 ACTAGACCATGATAAACCTACGAACTA 59.223 37.037 0.00 0.00 0.00 2.24
449 450 7.598759 AGACCATGATAAACCTACGAACTAT 57.401 36.000 0.00 0.00 0.00 2.12
450 451 7.434492 AGACCATGATAAACCTACGAACTATG 58.566 38.462 0.00 0.00 0.00 2.23
451 452 7.287005 AGACCATGATAAACCTACGAACTATGA 59.713 37.037 0.00 0.00 0.00 2.15
452 453 7.434492 ACCATGATAAACCTACGAACTATGAG 58.566 38.462 0.00 0.00 0.00 2.90
453 454 6.868864 CCATGATAAACCTACGAACTATGAGG 59.131 42.308 0.00 0.00 35.05 3.86
454 455 7.255836 CCATGATAAACCTACGAACTATGAGGA 60.256 40.741 0.00 0.00 33.04 3.71
455 456 7.649533 TGATAAACCTACGAACTATGAGGAA 57.350 36.000 0.00 0.00 33.04 3.36
456 457 7.713750 TGATAAACCTACGAACTATGAGGAAG 58.286 38.462 0.00 0.00 33.04 3.46
457 458 4.388378 AACCTACGAACTATGAGGAAGC 57.612 45.455 0.00 0.00 33.04 3.86
458 459 3.362706 ACCTACGAACTATGAGGAAGCA 58.637 45.455 0.00 0.00 33.04 3.91
459 460 3.767673 ACCTACGAACTATGAGGAAGCAA 59.232 43.478 0.00 0.00 33.04 3.91
460 461 4.406003 ACCTACGAACTATGAGGAAGCAAT 59.594 41.667 0.00 0.00 33.04 3.56
467 468 5.627182 ACTATGAGGAAGCAATGATGAGT 57.373 39.130 0.00 0.00 0.00 3.41
501 502 3.553511 GTGCATGCTACACTTGCTAGTAG 59.446 47.826 20.33 0.00 46.78 2.57
502 503 3.195610 TGCATGCTACACTTGCTAGTAGT 59.804 43.478 20.33 4.77 46.78 2.73
503 504 4.401202 TGCATGCTACACTTGCTAGTAGTA 59.599 41.667 20.33 5.64 46.78 1.82
504 505 4.979197 GCATGCTACACTTGCTAGTAGTAG 59.021 45.833 21.53 21.53 44.08 2.57
505 506 5.450688 GCATGCTACACTTGCTAGTAGTAGT 60.451 44.000 23.91 13.38 44.08 2.73
506 507 6.238676 GCATGCTACACTTGCTAGTAGTAGTA 60.239 42.308 23.91 22.07 44.08 1.82
528 529 8.283699 AGTAGAAAAGAGTAGATAGTGGTGTC 57.716 38.462 0.00 0.00 0.00 3.67
536 537 4.772624 AGTAGATAGTGGTGTCACACATGT 59.227 41.667 10.85 0.00 45.91 3.21
537 538 3.930336 AGATAGTGGTGTCACACATGTG 58.070 45.455 24.25 24.25 45.91 3.21
564 565 1.701847 ACATGTCTGGGTTCAGCTCTT 59.298 47.619 0.00 0.00 40.69 2.85
567 568 2.889512 TGTCTGGGTTCAGCTCTTAGA 58.110 47.619 0.00 0.00 40.69 2.10
572 573 5.352846 GTCTGGGTTCAGCTCTTAGAAATTC 59.647 44.000 0.00 0.00 40.69 2.17
636 637 9.096160 CAAATTTGGCAATGTTTGTAGCATATA 57.904 29.630 21.16 0.00 0.00 0.86
692 693 5.178797 AGGTAATGTCAAGTGCACATAGTC 58.821 41.667 21.04 6.56 33.12 2.59
933 1696 1.442526 GCCGGTCTGATGGATTGCTG 61.443 60.000 1.90 0.00 0.00 4.41
934 1697 0.178767 CCGGTCTGATGGATTGCTGA 59.821 55.000 0.00 0.00 0.00 4.26
935 1698 1.202734 CCGGTCTGATGGATTGCTGAT 60.203 52.381 0.00 0.00 0.00 2.90
936 1699 1.871676 CGGTCTGATGGATTGCTGATG 59.128 52.381 0.00 0.00 0.00 3.07
1038 1801 4.652131 TGCCCGTCCGTTGCCAAT 62.652 61.111 0.00 0.00 0.00 3.16
1212 1975 4.629523 TGTTCCGCCGGGGTGTTC 62.630 66.667 18.27 5.62 37.00 3.18
1282 2045 1.131826 GTTGTGCGCGTACATGTCC 59.868 57.895 30.06 14.63 0.00 4.02
1368 2131 5.538053 TGAATTGGCCTATTGACTTTTGTGA 59.462 36.000 17.50 0.00 0.00 3.58
1387 2150 3.634910 GTGACTCTAAGCTTCCTCCTAGG 59.365 52.174 0.00 0.82 36.46 3.02
1550 2313 9.675464 AAGATAAATGAAGTGGGTTTACGAATA 57.325 29.630 0.00 0.00 0.00 1.75
1688 2451 9.367444 GTTACTACTGTTAGTTATGCACTTGAT 57.633 33.333 0.00 0.00 39.43 2.57
1698 2461 1.838112 TGCACTTGATTGATGGGTCC 58.162 50.000 0.00 0.00 0.00 4.46
1813 2576 5.664294 AATGCACTAAGGAAAATCATGCA 57.336 34.783 0.00 0.00 44.87 3.96
1823 2586 3.613737 GGAAAATCATGCACCAATTGACG 59.386 43.478 7.12 0.00 0.00 4.35
1824 2587 4.484236 GAAAATCATGCACCAATTGACGA 58.516 39.130 7.12 0.00 0.00 4.20
2081 2844 9.007901 CATTGTCTGAGAATCTTAGTCCTTTTT 57.992 33.333 1.92 0.00 34.92 1.94
2082 2845 7.969536 TGTCTGAGAATCTTAGTCCTTTTTG 57.030 36.000 1.92 0.00 34.92 2.44
2125 2888 7.909485 ATGCTTCCTCTCCATTTATTCATTT 57.091 32.000 0.00 0.00 0.00 2.32
2158 2921 4.622220 GCCTTGTTGATGCTCATTTCCATT 60.622 41.667 0.00 0.00 0.00 3.16
2159 2922 5.107133 CCTTGTTGATGCTCATTTCCATTC 58.893 41.667 0.00 0.00 0.00 2.67
2244 3007 7.689313 GCACCCTTCCATTGTATATTACTCAGA 60.689 40.741 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.656480 GCAACTCCAAACTTTAAGAAACCA 58.344 37.500 0.00 0.00 0.00 3.67
1 2 4.738252 CGCAACTCCAAACTTTAAGAAACC 59.262 41.667 0.00 0.00 0.00 3.27
2 3 5.575019 TCGCAACTCCAAACTTTAAGAAAC 58.425 37.500 0.00 0.00 0.00 2.78
3 4 5.821516 TCGCAACTCCAAACTTTAAGAAA 57.178 34.783 0.00 0.00 0.00 2.52
4 5 5.757886 CATCGCAACTCCAAACTTTAAGAA 58.242 37.500 0.00 0.00 0.00 2.52
5 6 4.320202 GCATCGCAACTCCAAACTTTAAGA 60.320 41.667 0.00 0.00 0.00 2.10
6 7 3.914364 GCATCGCAACTCCAAACTTTAAG 59.086 43.478 0.00 0.00 0.00 1.85
7 8 3.568007 AGCATCGCAACTCCAAACTTTAA 59.432 39.130 0.00 0.00 0.00 1.52
8 9 3.146066 AGCATCGCAACTCCAAACTTTA 58.854 40.909 0.00 0.00 0.00 1.85
9 10 1.956477 AGCATCGCAACTCCAAACTTT 59.044 42.857 0.00 0.00 0.00 2.66
10 11 1.609208 AGCATCGCAACTCCAAACTT 58.391 45.000 0.00 0.00 0.00 2.66
11 12 1.609208 AAGCATCGCAACTCCAAACT 58.391 45.000 0.00 0.00 0.00 2.66
12 13 3.119849 ACATAAGCATCGCAACTCCAAAC 60.120 43.478 0.00 0.00 0.00 2.93
13 14 3.081061 ACATAAGCATCGCAACTCCAAA 58.919 40.909 0.00 0.00 0.00 3.28
14 15 2.419673 CACATAAGCATCGCAACTCCAA 59.580 45.455 0.00 0.00 0.00 3.53
15 16 2.009051 CACATAAGCATCGCAACTCCA 58.991 47.619 0.00 0.00 0.00 3.86
16 17 2.279741 TCACATAAGCATCGCAACTCC 58.720 47.619 0.00 0.00 0.00 3.85
17 18 4.340894 TTTCACATAAGCATCGCAACTC 57.659 40.909 0.00 0.00 0.00 3.01
18 19 4.764679 TTTTCACATAAGCATCGCAACT 57.235 36.364 0.00 0.00 0.00 3.16
38 39 6.817765 TCGAGCTTATCAGGTTGAATTTTT 57.182 33.333 0.00 0.00 37.89 1.94
39 40 6.817765 TTCGAGCTTATCAGGTTGAATTTT 57.182 33.333 4.92 0.00 43.29 1.82
43 44 3.596214 GGTTCGAGCTTATCAGGTTGAA 58.404 45.455 4.92 4.92 45.11 2.69
44 45 2.093658 GGGTTCGAGCTTATCAGGTTGA 60.094 50.000 0.00 0.00 38.89 3.18
45 46 2.280628 GGGTTCGAGCTTATCAGGTTG 58.719 52.381 0.00 0.00 33.63 3.77
46 47 1.906574 TGGGTTCGAGCTTATCAGGTT 59.093 47.619 0.00 0.00 0.00 3.50
47 48 1.568504 TGGGTTCGAGCTTATCAGGT 58.431 50.000 0.00 0.00 0.00 4.00
48 49 2.691409 TTGGGTTCGAGCTTATCAGG 57.309 50.000 0.00 0.00 0.00 3.86
49 50 3.246226 CGATTTGGGTTCGAGCTTATCAG 59.754 47.826 0.00 0.00 38.88 2.90
50 51 3.194861 CGATTTGGGTTCGAGCTTATCA 58.805 45.455 0.00 0.00 38.88 2.15
51 52 2.544267 CCGATTTGGGTTCGAGCTTATC 59.456 50.000 0.00 0.00 38.88 1.75
52 53 2.169769 TCCGATTTGGGTTCGAGCTTAT 59.830 45.455 0.00 0.00 38.88 1.73
53 54 1.551430 TCCGATTTGGGTTCGAGCTTA 59.449 47.619 0.00 0.00 38.88 3.09
54 55 0.323629 TCCGATTTGGGTTCGAGCTT 59.676 50.000 0.00 0.00 38.88 3.74
55 56 0.108138 CTCCGATTTGGGTTCGAGCT 60.108 55.000 0.00 0.00 38.88 4.09
56 57 0.108329 TCTCCGATTTGGGTTCGAGC 60.108 55.000 0.00 0.00 38.88 5.03
57 58 2.380084 TTCTCCGATTTGGGTTCGAG 57.620 50.000 0.00 0.00 38.88 4.04
58 59 2.843401 TTTCTCCGATTTGGGTTCGA 57.157 45.000 0.00 0.00 38.88 3.71
59 60 4.165779 CAAATTTCTCCGATTTGGGTTCG 58.834 43.478 0.00 0.00 39.59 3.95
60 61 5.048013 AGACAAATTTCTCCGATTTGGGTTC 60.048 40.000 12.51 3.65 44.70 3.62
61 62 4.832823 AGACAAATTTCTCCGATTTGGGTT 59.167 37.500 12.51 0.00 44.70 4.11
62 63 4.407365 AGACAAATTTCTCCGATTTGGGT 58.593 39.130 12.51 0.00 44.70 4.51
63 64 5.048083 TGAAGACAAATTTCTCCGATTTGGG 60.048 40.000 12.51 0.00 44.70 4.12
64 65 6.012658 TGAAGACAAATTTCTCCGATTTGG 57.987 37.500 12.51 0.00 44.70 3.28
65 66 7.912250 CCTATGAAGACAAATTTCTCCGATTTG 59.088 37.037 7.74 7.74 45.47 2.32
66 67 7.829211 TCCTATGAAGACAAATTTCTCCGATTT 59.171 33.333 0.00 0.00 0.00 2.17
67 68 7.338710 TCCTATGAAGACAAATTTCTCCGATT 58.661 34.615 0.00 0.00 0.00 3.34
68 69 6.889198 TCCTATGAAGACAAATTTCTCCGAT 58.111 36.000 0.00 0.00 0.00 4.18
69 70 6.294361 TCCTATGAAGACAAATTTCTCCGA 57.706 37.500 0.00 0.00 0.00 4.55
70 71 7.171678 GGTATCCTATGAAGACAAATTTCTCCG 59.828 40.741 0.00 0.00 0.00 4.63
71 72 7.445707 GGGTATCCTATGAAGACAAATTTCTCC 59.554 40.741 0.00 0.00 0.00 3.71
72 73 7.993183 TGGGTATCCTATGAAGACAAATTTCTC 59.007 37.037 0.00 0.00 0.00 2.87
73 74 7.872138 TGGGTATCCTATGAAGACAAATTTCT 58.128 34.615 0.00 0.00 0.00 2.52
74 75 8.519799 TTGGGTATCCTATGAAGACAAATTTC 57.480 34.615 0.00 0.00 0.00 2.17
75 76 8.893563 TTTGGGTATCCTATGAAGACAAATTT 57.106 30.769 0.00 0.00 0.00 1.82
76 77 7.561356 CCTTTGGGTATCCTATGAAGACAAATT 59.439 37.037 0.00 0.00 0.00 1.82
77 78 7.062957 CCTTTGGGTATCCTATGAAGACAAAT 58.937 38.462 0.00 0.00 0.00 2.32
78 79 6.216662 TCCTTTGGGTATCCTATGAAGACAAA 59.783 38.462 0.00 0.00 0.00 2.83
79 80 5.729229 TCCTTTGGGTATCCTATGAAGACAA 59.271 40.000 0.00 0.00 0.00 3.18
80 81 5.285401 TCCTTTGGGTATCCTATGAAGACA 58.715 41.667 0.00 0.00 0.00 3.41
81 82 5.888982 TCCTTTGGGTATCCTATGAAGAC 57.111 43.478 0.00 0.00 0.00 3.01
82 83 6.447084 AGTTTCCTTTGGGTATCCTATGAAGA 59.553 38.462 0.00 0.00 0.00 2.87
83 84 6.543831 CAGTTTCCTTTGGGTATCCTATGAAG 59.456 42.308 0.00 0.00 0.00 3.02
84 85 6.011981 ACAGTTTCCTTTGGGTATCCTATGAA 60.012 38.462 0.00 0.00 0.00 2.57
85 86 5.491078 ACAGTTTCCTTTGGGTATCCTATGA 59.509 40.000 0.00 0.00 0.00 2.15
86 87 5.755849 ACAGTTTCCTTTGGGTATCCTATG 58.244 41.667 0.00 0.00 0.00 2.23
87 88 6.187682 CAACAGTTTCCTTTGGGTATCCTAT 58.812 40.000 0.00 0.00 0.00 2.57
88 89 5.515886 CCAACAGTTTCCTTTGGGTATCCTA 60.516 44.000 0.00 0.00 36.84 2.94
89 90 4.407365 CAACAGTTTCCTTTGGGTATCCT 58.593 43.478 0.00 0.00 0.00 3.24
90 91 3.509967 CCAACAGTTTCCTTTGGGTATCC 59.490 47.826 0.00 0.00 36.84 2.59
91 92 4.783764 CCAACAGTTTCCTTTGGGTATC 57.216 45.455 0.00 0.00 36.84 2.24
96 97 3.067601 GTGTACCCAACAGTTTCCTTTGG 59.932 47.826 0.00 0.00 39.29 3.28
97 98 3.067601 GGTGTACCCAACAGTTTCCTTTG 59.932 47.826 0.00 0.00 39.29 2.77
98 99 3.053170 AGGTGTACCCAACAGTTTCCTTT 60.053 43.478 0.00 0.00 39.29 3.11
99 100 2.512476 AGGTGTACCCAACAGTTTCCTT 59.488 45.455 0.00 0.00 39.29 3.36
100 101 2.132686 AGGTGTACCCAACAGTTTCCT 58.867 47.619 0.00 0.00 39.29 3.36
101 102 2.651382 AGGTGTACCCAACAGTTTCC 57.349 50.000 0.00 0.00 39.29 3.13
102 103 3.816994 AGAAGGTGTACCCAACAGTTTC 58.183 45.455 0.00 0.00 39.29 2.78
103 104 3.945640 AGAAGGTGTACCCAACAGTTT 57.054 42.857 0.00 0.00 39.29 2.66
104 105 4.595781 TGATAGAAGGTGTACCCAACAGTT 59.404 41.667 0.00 0.00 39.29 3.16
105 106 4.020485 GTGATAGAAGGTGTACCCAACAGT 60.020 45.833 0.00 0.00 39.29 3.55
106 107 4.020573 TGTGATAGAAGGTGTACCCAACAG 60.021 45.833 0.00 0.00 39.29 3.16
107 108 3.904965 TGTGATAGAAGGTGTACCCAACA 59.095 43.478 0.00 0.00 36.42 3.33
108 109 4.222145 TCTGTGATAGAAGGTGTACCCAAC 59.778 45.833 0.00 0.00 36.42 3.77
109 110 4.422057 TCTGTGATAGAAGGTGTACCCAA 58.578 43.478 0.00 0.00 36.42 4.12
110 111 4.055710 TCTGTGATAGAAGGTGTACCCA 57.944 45.455 0.00 0.00 36.42 4.51
111 112 4.039366 GGATCTGTGATAGAAGGTGTACCC 59.961 50.000 0.00 0.00 39.30 3.69
112 113 4.261656 CGGATCTGTGATAGAAGGTGTACC 60.262 50.000 0.00 0.00 39.30 3.34
113 114 4.579340 TCGGATCTGTGATAGAAGGTGTAC 59.421 45.833 0.42 0.00 39.30 2.90
114 115 4.788679 TCGGATCTGTGATAGAAGGTGTA 58.211 43.478 0.42 0.00 39.30 2.90
115 116 3.632333 TCGGATCTGTGATAGAAGGTGT 58.368 45.455 0.42 0.00 39.30 4.16
116 117 4.500545 CCTTCGGATCTGTGATAGAAGGTG 60.501 50.000 22.28 9.42 45.66 4.00
117 118 3.639094 CCTTCGGATCTGTGATAGAAGGT 59.361 47.826 22.28 0.00 45.66 3.50
118 119 4.250116 CCTTCGGATCTGTGATAGAAGG 57.750 50.000 19.74 19.74 45.56 3.46
119 120 3.068732 TGCCTTCGGATCTGTGATAGAAG 59.931 47.826 0.42 13.45 39.30 2.85
120 121 3.031013 TGCCTTCGGATCTGTGATAGAA 58.969 45.455 0.42 0.00 39.30 2.10
121 122 2.666317 TGCCTTCGGATCTGTGATAGA 58.334 47.619 0.42 0.00 40.37 1.98
122 123 3.068732 TCTTGCCTTCGGATCTGTGATAG 59.931 47.826 0.42 0.00 0.00 2.08
123 124 3.031013 TCTTGCCTTCGGATCTGTGATA 58.969 45.455 0.42 0.00 0.00 2.15
124 125 1.833630 TCTTGCCTTCGGATCTGTGAT 59.166 47.619 0.42 0.00 0.00 3.06
125 126 1.066858 GTCTTGCCTTCGGATCTGTGA 60.067 52.381 0.42 0.00 0.00 3.58
126 127 1.338105 TGTCTTGCCTTCGGATCTGTG 60.338 52.381 0.42 0.00 0.00 3.66
127 128 0.976641 TGTCTTGCCTTCGGATCTGT 59.023 50.000 0.42 0.00 0.00 3.41
128 129 2.322355 ATGTCTTGCCTTCGGATCTG 57.678 50.000 0.00 0.00 0.00 2.90
129 130 2.739932 CGAATGTCTTGCCTTCGGATCT 60.740 50.000 0.00 0.00 40.11 2.75
130 131 1.594862 CGAATGTCTTGCCTTCGGATC 59.405 52.381 0.00 0.00 40.11 3.36
131 132 1.066143 ACGAATGTCTTGCCTTCGGAT 60.066 47.619 8.53 0.00 45.28 4.18
132 133 0.320374 ACGAATGTCTTGCCTTCGGA 59.680 50.000 8.53 0.00 45.28 4.55
133 134 1.135972 CAACGAATGTCTTGCCTTCGG 60.136 52.381 8.53 0.00 45.28 4.30
134 135 1.725931 GCAACGAATGTCTTGCCTTCG 60.726 52.381 0.00 2.69 46.04 3.79
135 136 1.969103 GCAACGAATGTCTTGCCTTC 58.031 50.000 0.00 0.00 37.41 3.46
139 140 1.266718 TCTTGGCAACGAATGTCTTGC 59.733 47.619 0.00 0.00 41.79 4.01
140 141 3.624326 TTCTTGGCAACGAATGTCTTG 57.376 42.857 0.00 0.00 42.51 3.02
141 142 3.057315 CCATTCTTGGCAACGAATGTCTT 60.057 43.478 29.36 11.20 42.97 3.01
142 143 2.489329 CCATTCTTGGCAACGAATGTCT 59.511 45.455 29.36 11.44 42.97 3.41
143 144 2.487762 TCCATTCTTGGCAACGAATGTC 59.512 45.455 29.36 0.00 42.97 3.06
144 145 2.513753 TCCATTCTTGGCAACGAATGT 58.486 42.857 29.36 12.15 42.97 2.71
145 146 3.489738 GGATCCATTCTTGGCAACGAATG 60.490 47.826 27.38 27.38 43.29 2.67
146 147 2.689983 GGATCCATTCTTGGCAACGAAT 59.310 45.455 6.95 14.90 43.29 3.34
147 148 2.091541 GGATCCATTCTTGGCAACGAA 58.908 47.619 6.95 12.33 43.29 3.85
148 149 1.281867 AGGATCCATTCTTGGCAACGA 59.718 47.619 15.82 0.00 43.29 3.85
149 150 1.755179 AGGATCCATTCTTGGCAACG 58.245 50.000 15.82 0.00 43.29 4.10
150 151 3.766051 AGAAAGGATCCATTCTTGGCAAC 59.234 43.478 23.48 0.09 43.29 4.17
151 152 4.051661 AGAAAGGATCCATTCTTGGCAA 57.948 40.909 23.48 0.00 43.29 4.52
152 153 3.744940 AGAAAGGATCCATTCTTGGCA 57.255 42.857 23.48 0.00 43.29 4.92
153 154 5.041191 TCTAGAAAGGATCCATTCTTGGC 57.959 43.478 31.26 7.32 43.29 4.52
154 155 6.491714 TCTCTAGAAAGGATCCATTCTTGG 57.508 41.667 31.26 23.89 45.15 3.61
155 156 7.790027 TCTTCTCTAGAAAGGATCCATTCTTG 58.210 38.462 31.26 28.26 35.84 3.02
156 157 7.986553 TCTTCTCTAGAAAGGATCCATTCTT 57.013 36.000 31.26 18.15 35.84 2.52
157 158 7.623278 ACTTCTTCTCTAGAAAGGATCCATTCT 59.377 37.037 29.58 29.58 42.19 2.40
158 159 7.791029 ACTTCTTCTCTAGAAAGGATCCATTC 58.209 38.462 19.84 19.84 42.19 2.67
159 160 7.747809 ACTTCTTCTCTAGAAAGGATCCATT 57.252 36.000 15.82 8.54 42.19 3.16
160 161 7.747809 AACTTCTTCTCTAGAAAGGATCCAT 57.252 36.000 15.82 0.00 42.19 3.41
161 162 7.456269 AGAAACTTCTTCTCTAGAAAGGATCCA 59.544 37.037 15.82 0.00 42.19 3.41
162 163 7.763985 CAGAAACTTCTTCTCTAGAAAGGATCC 59.236 40.741 2.48 2.48 42.19 3.36
163 164 8.311109 ACAGAAACTTCTTCTCTAGAAAGGATC 58.689 37.037 6.80 4.72 42.19 3.36
164 165 8.201242 ACAGAAACTTCTTCTCTAGAAAGGAT 57.799 34.615 6.80 0.00 42.19 3.24
165 166 7.522399 CGACAGAAACTTCTTCTCTAGAAAGGA 60.522 40.741 6.80 2.40 42.19 3.36
166 167 6.584563 CGACAGAAACTTCTTCTCTAGAAAGG 59.415 42.308 6.80 0.00 42.19 3.11
167 168 7.364200 TCGACAGAAACTTCTTCTCTAGAAAG 58.636 38.462 0.00 0.00 42.19 2.62
168 169 7.273320 TCGACAGAAACTTCTTCTCTAGAAA 57.727 36.000 0.00 0.00 42.19 2.52
169 170 6.879276 TCGACAGAAACTTCTTCTCTAGAA 57.121 37.500 0.00 0.00 40.57 2.10
170 171 6.879276 TTCGACAGAAACTTCTTCTCTAGA 57.121 37.500 0.00 0.00 34.74 2.43
171 172 7.364200 TCTTTCGACAGAAACTTCTTCTCTAG 58.636 38.462 0.00 0.00 41.06 2.43
172 173 7.273320 TCTTTCGACAGAAACTTCTTCTCTA 57.727 36.000 0.00 0.00 41.06 2.43
173 174 6.150396 TCTTTCGACAGAAACTTCTTCTCT 57.850 37.500 0.00 0.00 41.06 3.10
174 175 6.477360 ACTTCTTTCGACAGAAACTTCTTCTC 59.523 38.462 14.53 0.00 41.06 2.87
175 176 6.256757 CACTTCTTTCGACAGAAACTTCTTCT 59.743 38.462 14.53 0.00 41.06 2.85
176 177 6.255887 TCACTTCTTTCGACAGAAACTTCTTC 59.744 38.462 14.53 0.00 41.06 2.87
177 178 6.106673 TCACTTCTTTCGACAGAAACTTCTT 58.893 36.000 14.53 0.00 41.06 2.52
178 179 5.661458 TCACTTCTTTCGACAGAAACTTCT 58.339 37.500 14.53 0.00 41.06 2.85
179 180 5.520649 ACTCACTTCTTTCGACAGAAACTTC 59.479 40.000 14.53 0.00 41.06 3.01
180 181 5.292101 CACTCACTTCTTTCGACAGAAACTT 59.708 40.000 14.53 0.57 41.06 2.66
181 182 4.806247 CACTCACTTCTTTCGACAGAAACT 59.194 41.667 14.53 1.12 41.06 2.66
182 183 4.025647 CCACTCACTTCTTTCGACAGAAAC 60.026 45.833 14.53 0.00 41.06 2.78
183 184 4.119862 CCACTCACTTCTTTCGACAGAAA 58.880 43.478 14.53 0.37 43.44 2.52
184 185 3.492656 CCCACTCACTTCTTTCGACAGAA 60.493 47.826 13.13 13.13 33.98 3.02
185 186 2.035961 CCCACTCACTTCTTTCGACAGA 59.964 50.000 0.00 0.00 0.00 3.41
186 187 2.035961 TCCCACTCACTTCTTTCGACAG 59.964 50.000 0.00 0.00 0.00 3.51
187 188 2.035961 CTCCCACTCACTTCTTTCGACA 59.964 50.000 0.00 0.00 0.00 4.35
188 189 2.296471 TCTCCCACTCACTTCTTTCGAC 59.704 50.000 0.00 0.00 0.00 4.20
189 190 2.594131 TCTCCCACTCACTTCTTTCGA 58.406 47.619 0.00 0.00 0.00 3.71
190 191 3.386768 TTCTCCCACTCACTTCTTTCG 57.613 47.619 0.00 0.00 0.00 3.46
191 192 5.126779 ACTTTTCTCCCACTCACTTCTTTC 58.873 41.667 0.00 0.00 0.00 2.62
192 193 5.117406 ACTTTTCTCCCACTCACTTCTTT 57.883 39.130 0.00 0.00 0.00 2.52
193 194 4.779993 ACTTTTCTCCCACTCACTTCTT 57.220 40.909 0.00 0.00 0.00 2.52
194 195 5.148502 TCTACTTTTCTCCCACTCACTTCT 58.851 41.667 0.00 0.00 0.00 2.85
195 196 5.470047 TCTACTTTTCTCCCACTCACTTC 57.530 43.478 0.00 0.00 0.00 3.01
196 197 5.367060 AGTTCTACTTTTCTCCCACTCACTT 59.633 40.000 0.00 0.00 0.00 3.16
197 198 4.902448 AGTTCTACTTTTCTCCCACTCACT 59.098 41.667 0.00 0.00 0.00 3.41
198 199 5.216614 AGTTCTACTTTTCTCCCACTCAC 57.783 43.478 0.00 0.00 0.00 3.51
199 200 5.365605 TCAAGTTCTACTTTTCTCCCACTCA 59.634 40.000 0.00 0.00 36.03 3.41
200 201 5.855045 TCAAGTTCTACTTTTCTCCCACTC 58.145 41.667 0.00 0.00 36.03 3.51
201 202 5.888982 TCAAGTTCTACTTTTCTCCCACT 57.111 39.130 0.00 0.00 36.03 4.00
202 203 6.231211 TCATCAAGTTCTACTTTTCTCCCAC 58.769 40.000 0.00 0.00 36.03 4.61
203 204 6.433847 TCATCAAGTTCTACTTTTCTCCCA 57.566 37.500 0.00 0.00 36.03 4.37
204 205 5.877564 CCTCATCAAGTTCTACTTTTCTCCC 59.122 44.000 0.00 0.00 36.03 4.30
205 206 6.468543 ACCTCATCAAGTTCTACTTTTCTCC 58.531 40.000 0.00 0.00 36.03 3.71
206 207 9.660180 ATTACCTCATCAAGTTCTACTTTTCTC 57.340 33.333 0.00 0.00 36.03 2.87
212 213 9.134055 GGTACTATTACCTCATCAAGTTCTACT 57.866 37.037 2.07 0.00 44.24 2.57
240 241 5.811190 TGAACTATTTTCCAATTCGGGAGA 58.189 37.500 0.00 0.00 38.42 3.71
241 242 6.318648 TGATGAACTATTTTCCAATTCGGGAG 59.681 38.462 0.00 0.00 38.42 4.30
242 243 6.094881 GTGATGAACTATTTTCCAATTCGGGA 59.905 38.462 0.00 0.00 34.36 5.14
243 244 6.095440 AGTGATGAACTATTTTCCAATTCGGG 59.905 38.462 0.00 0.00 37.36 5.14
244 245 6.968904 CAGTGATGAACTATTTTCCAATTCGG 59.031 38.462 0.00 0.00 36.83 4.30
245 246 7.751732 TCAGTGATGAACTATTTTCCAATTCG 58.248 34.615 0.00 0.00 36.83 3.34
246 247 9.912634 TTTCAGTGATGAACTATTTTCCAATTC 57.087 29.630 0.00 0.00 36.83 2.17
249 250 9.076781 TGATTTCAGTGATGAACTATTTTCCAA 57.923 29.630 0.00 0.00 36.83 3.53
250 251 8.634335 TGATTTCAGTGATGAACTATTTTCCA 57.366 30.769 0.00 0.00 36.83 3.53
268 269 5.246981 AGGAATCACTGGAACTGATTTCA 57.753 39.130 2.96 0.00 38.27 2.69
269 270 6.092807 GTGTAGGAATCACTGGAACTGATTTC 59.907 42.308 0.00 0.00 38.27 2.17
270 271 5.940470 GTGTAGGAATCACTGGAACTGATTT 59.060 40.000 0.00 0.00 38.27 2.17
271 272 5.491982 GTGTAGGAATCACTGGAACTGATT 58.508 41.667 0.00 0.00 40.38 2.57
272 273 4.080863 GGTGTAGGAATCACTGGAACTGAT 60.081 45.833 0.00 0.00 36.25 2.90
273 274 3.260884 GGTGTAGGAATCACTGGAACTGA 59.739 47.826 0.00 0.00 36.25 3.41
274 275 3.007940 TGGTGTAGGAATCACTGGAACTG 59.992 47.826 0.00 0.00 36.25 3.16
275 276 3.248024 TGGTGTAGGAATCACTGGAACT 58.752 45.455 0.00 0.00 36.25 3.01
276 277 3.695830 TGGTGTAGGAATCACTGGAAC 57.304 47.619 0.00 0.00 36.25 3.62
277 278 4.927267 ATTGGTGTAGGAATCACTGGAA 57.073 40.909 0.00 0.00 36.25 3.53
278 279 4.927267 AATTGGTGTAGGAATCACTGGA 57.073 40.909 0.00 0.00 36.25 3.86
279 280 5.586243 CACTAATTGGTGTAGGAATCACTGG 59.414 44.000 13.42 0.00 36.25 4.00
280 281 6.406370 TCACTAATTGGTGTAGGAATCACTG 58.594 40.000 19.91 0.00 38.28 3.66
281 282 6.352222 CCTCACTAATTGGTGTAGGAATCACT 60.352 42.308 23.72 0.00 37.03 3.41
282 283 5.817816 CCTCACTAATTGGTGTAGGAATCAC 59.182 44.000 23.72 0.00 37.03 3.06
283 284 5.724370 TCCTCACTAATTGGTGTAGGAATCA 59.276 40.000 26.10 13.50 38.86 2.57
284 285 6.235231 TCCTCACTAATTGGTGTAGGAATC 57.765 41.667 26.10 0.00 38.86 2.52
285 286 6.353082 CCTTCCTCACTAATTGGTGTAGGAAT 60.353 42.308 31.66 0.00 43.55 3.01
286 287 5.045869 CCTTCCTCACTAATTGGTGTAGGAA 60.046 44.000 30.65 30.65 43.06 3.36
287 288 4.469945 CCTTCCTCACTAATTGGTGTAGGA 59.530 45.833 25.27 25.27 39.41 2.94
288 289 4.225267 ACCTTCCTCACTAATTGGTGTAGG 59.775 45.833 22.83 22.83 38.28 3.18
289 290 5.422214 ACCTTCCTCACTAATTGGTGTAG 57.578 43.478 19.91 15.21 38.28 2.74
290 291 6.938698 TTACCTTCCTCACTAATTGGTGTA 57.061 37.500 19.91 7.65 38.28 2.90
291 292 5.836024 TTACCTTCCTCACTAATTGGTGT 57.164 39.130 19.91 3.41 38.28 4.16
292 293 6.414732 TCATTACCTTCCTCACTAATTGGTG 58.585 40.000 15.31 15.31 38.44 4.17
293 294 6.636454 TCATTACCTTCCTCACTAATTGGT 57.364 37.500 0.00 0.00 0.00 3.67
294 295 7.282585 TCATCATTACCTTCCTCACTAATTGG 58.717 38.462 0.00 0.00 0.00 3.16
295 296 8.781196 CATCATCATTACCTTCCTCACTAATTG 58.219 37.037 0.00 0.00 0.00 2.32
296 297 8.717717 TCATCATCATTACCTTCCTCACTAATT 58.282 33.333 0.00 0.00 0.00 1.40
297 298 8.267620 TCATCATCATTACCTTCCTCACTAAT 57.732 34.615 0.00 0.00 0.00 1.73
298 299 7.675161 TCATCATCATTACCTTCCTCACTAA 57.325 36.000 0.00 0.00 0.00 2.24
299 300 7.510343 TGATCATCATCATTACCTTCCTCACTA 59.490 37.037 0.00 0.00 33.80 2.74
300 301 6.328410 TGATCATCATCATTACCTTCCTCACT 59.672 38.462 0.00 0.00 33.80 3.41
301 302 6.528321 TGATCATCATCATTACCTTCCTCAC 58.472 40.000 0.00 0.00 33.80 3.51
302 303 6.752285 TGATCATCATCATTACCTTCCTCA 57.248 37.500 0.00 0.00 33.80 3.86
303 304 7.392418 TCATGATCATCATCATTACCTTCCTC 58.608 38.462 4.86 0.00 46.07 3.71
304 305 7.325725 TCATGATCATCATCATTACCTTCCT 57.674 36.000 4.86 0.00 46.07 3.36
305 306 7.991084 TTCATGATCATCATCATTACCTTCC 57.009 36.000 4.86 0.00 46.07 3.46
306 307 9.064706 AGTTTCATGATCATCATCATTACCTTC 57.935 33.333 4.86 0.00 46.07 3.46
307 308 8.991783 AGTTTCATGATCATCATCATTACCTT 57.008 30.769 4.86 0.00 46.07 3.50
308 309 8.991783 AAGTTTCATGATCATCATCATTACCT 57.008 30.769 4.86 0.00 46.07 3.08
309 310 8.843262 TGAAGTTTCATGATCATCATCATTACC 58.157 33.333 4.86 0.00 46.07 2.85
310 311 9.880064 CTGAAGTTTCATGATCATCATCATTAC 57.120 33.333 4.86 0.00 46.07 1.89
311 312 9.841295 TCTGAAGTTTCATGATCATCATCATTA 57.159 29.630 4.86 0.00 46.07 1.90
312 313 8.747538 TCTGAAGTTTCATGATCATCATCATT 57.252 30.769 4.86 0.00 46.07 2.57
314 315 7.990886 TGATCTGAAGTTTCATGATCATCATCA 59.009 33.333 20.55 5.65 41.42 3.07
315 316 8.379457 TGATCTGAAGTTTCATGATCATCATC 57.621 34.615 20.55 3.27 41.42 2.92
316 317 8.747538 TTGATCTGAAGTTTCATGATCATCAT 57.252 30.769 22.69 0.00 43.24 2.45
317 318 7.827729 ACTTGATCTGAAGTTTCATGATCATCA 59.172 33.333 22.69 15.09 43.24 3.07
318 319 8.211116 ACTTGATCTGAAGTTTCATGATCATC 57.789 34.615 22.69 0.00 43.24 2.92
319 320 8.577048 AACTTGATCTGAAGTTTCATGATCAT 57.423 30.769 22.69 1.18 42.33 2.45
320 321 7.991084 AACTTGATCTGAAGTTTCATGATCA 57.009 32.000 20.55 20.55 42.33 2.92
321 322 9.160496 AGTAACTTGATCTGAAGTTTCATGATC 57.840 33.333 14.35 17.74 42.33 2.92
323 324 9.424319 GTAGTAACTTGATCTGAAGTTTCATGA 57.576 33.333 14.35 0.00 42.33 3.07
324 325 9.208022 TGTAGTAACTTGATCTGAAGTTTCATG 57.792 33.333 14.35 0.00 42.33 3.07
325 326 9.429359 CTGTAGTAACTTGATCTGAAGTTTCAT 57.571 33.333 14.35 6.08 42.33 2.57
326 327 8.638873 TCTGTAGTAACTTGATCTGAAGTTTCA 58.361 33.333 14.35 9.33 42.33 2.69
327 328 9.477484 TTCTGTAGTAACTTGATCTGAAGTTTC 57.523 33.333 14.35 10.48 42.33 2.78
328 329 9.262358 GTTCTGTAGTAACTTGATCTGAAGTTT 57.738 33.333 14.35 3.30 42.33 2.66
329 330 7.873505 GGTTCTGTAGTAACTTGATCTGAAGTT 59.126 37.037 13.79 13.79 45.87 2.66
330 331 7.379750 GGTTCTGTAGTAACTTGATCTGAAGT 58.620 38.462 0.00 0.00 37.81 3.01
331 332 6.814146 GGGTTCTGTAGTAACTTGATCTGAAG 59.186 42.308 0.00 0.00 0.00 3.02
332 333 6.295688 GGGGTTCTGTAGTAACTTGATCTGAA 60.296 42.308 0.00 0.00 0.00 3.02
333 334 5.187186 GGGGTTCTGTAGTAACTTGATCTGA 59.813 44.000 0.00 0.00 0.00 3.27
334 335 5.420409 GGGGTTCTGTAGTAACTTGATCTG 58.580 45.833 0.00 0.00 0.00 2.90
335 336 4.159879 CGGGGTTCTGTAGTAACTTGATCT 59.840 45.833 0.00 0.00 0.00 2.75
336 337 4.081807 ACGGGGTTCTGTAGTAACTTGATC 60.082 45.833 0.00 0.00 0.00 2.92
337 338 3.836562 ACGGGGTTCTGTAGTAACTTGAT 59.163 43.478 0.00 0.00 0.00 2.57
338 339 3.233507 ACGGGGTTCTGTAGTAACTTGA 58.766 45.455 0.00 0.00 0.00 3.02
339 340 3.672767 ACGGGGTTCTGTAGTAACTTG 57.327 47.619 0.00 0.00 0.00 3.16
340 341 3.766051 CCTACGGGGTTCTGTAGTAACTT 59.234 47.826 10.37 0.00 46.41 2.66
341 342 3.359950 CCTACGGGGTTCTGTAGTAACT 58.640 50.000 10.37 0.00 46.41 2.24
342 343 3.790152 CCTACGGGGTTCTGTAGTAAC 57.210 52.381 10.37 0.00 46.41 2.50
354 355 0.324460 ACTCTGGAAGACCTACGGGG 60.324 60.000 0.00 0.00 38.67 5.73
355 356 2.022934 GTACTCTGGAAGACCTACGGG 58.977 57.143 0.00 0.00 38.67 5.28
356 357 1.669779 CGTACTCTGGAAGACCTACGG 59.330 57.143 0.00 0.00 38.67 4.02
357 358 1.669779 CCGTACTCTGGAAGACCTACG 59.330 57.143 0.00 0.00 38.67 3.51
358 359 2.682352 GACCGTACTCTGGAAGACCTAC 59.318 54.545 0.00 0.00 38.67 3.18
359 360 2.306805 TGACCGTACTCTGGAAGACCTA 59.693 50.000 0.00 0.00 38.67 3.08
360 361 1.075050 TGACCGTACTCTGGAAGACCT 59.925 52.381 0.00 0.00 38.67 3.85
361 362 1.473278 CTGACCGTACTCTGGAAGACC 59.527 57.143 0.00 0.00 38.67 3.85
362 363 1.135344 GCTGACCGTACTCTGGAAGAC 60.135 57.143 0.00 0.00 38.67 3.01
363 364 1.174783 GCTGACCGTACTCTGGAAGA 58.825 55.000 0.00 0.00 43.69 2.87
364 365 0.888619 TGCTGACCGTACTCTGGAAG 59.111 55.000 0.00 0.00 0.00 3.46
365 366 0.601558 GTGCTGACCGTACTCTGGAA 59.398 55.000 0.00 0.00 0.00 3.53
366 367 1.248785 GGTGCTGACCGTACTCTGGA 61.249 60.000 0.00 0.00 30.61 3.86
367 368 1.215647 GGTGCTGACCGTACTCTGG 59.784 63.158 0.00 0.00 30.61 3.86
368 369 0.109086 CTGGTGCTGACCGTACTCTG 60.109 60.000 0.00 0.00 46.62 3.35
369 370 0.251209 TCTGGTGCTGACCGTACTCT 60.251 55.000 0.00 0.00 46.62 3.24
370 371 0.171455 CTCTGGTGCTGACCGTACTC 59.829 60.000 0.00 0.00 46.62 2.59
371 372 0.539901 ACTCTGGTGCTGACCGTACT 60.540 55.000 0.00 0.00 46.62 2.73
372 373 0.388649 CACTCTGGTGCTGACCGTAC 60.389 60.000 0.00 0.00 46.62 3.67
373 374 1.532604 CCACTCTGGTGCTGACCGTA 61.533 60.000 0.00 0.00 46.62 4.02
374 375 2.737180 CACTCTGGTGCTGACCGT 59.263 61.111 0.00 0.00 46.62 4.83
375 376 2.047844 CCACTCTGGTGCTGACCG 60.048 66.667 0.00 0.00 46.62 4.79
384 385 5.786264 ATAGGATTAACGTACCACTCTGG 57.214 43.478 0.00 0.00 45.02 3.86
385 386 6.918569 CAGAATAGGATTAACGTACCACTCTG 59.081 42.308 0.00 1.47 0.00 3.35
386 387 6.832384 TCAGAATAGGATTAACGTACCACTCT 59.168 38.462 0.00 0.00 0.00 3.24
387 388 7.035840 TCAGAATAGGATTAACGTACCACTC 57.964 40.000 0.00 0.00 0.00 3.51
388 389 7.414222 TTCAGAATAGGATTAACGTACCACT 57.586 36.000 0.00 0.00 0.00 4.00
389 390 7.763071 ACTTTCAGAATAGGATTAACGTACCAC 59.237 37.037 0.00 0.00 0.00 4.16
390 391 7.844009 ACTTTCAGAATAGGATTAACGTACCA 58.156 34.615 0.00 0.00 0.00 3.25
391 392 7.977853 TGACTTTCAGAATAGGATTAACGTACC 59.022 37.037 0.00 0.00 0.00 3.34
392 393 8.922058 TGACTTTCAGAATAGGATTAACGTAC 57.078 34.615 0.00 0.00 0.00 3.67
393 394 9.529325 CATGACTTTCAGAATAGGATTAACGTA 57.471 33.333 0.00 0.00 0.00 3.57
394 395 8.041323 ACATGACTTTCAGAATAGGATTAACGT 58.959 33.333 0.00 0.00 0.00 3.99
395 396 8.425577 ACATGACTTTCAGAATAGGATTAACG 57.574 34.615 0.00 0.00 0.00 3.18
401 402 9.475620 TCTAGTAACATGACTTTCAGAATAGGA 57.524 33.333 0.00 0.00 0.00 2.94
402 403 9.522804 GTCTAGTAACATGACTTTCAGAATAGG 57.477 37.037 0.00 0.00 0.00 2.57
403 404 9.522804 GGTCTAGTAACATGACTTTCAGAATAG 57.477 37.037 0.00 0.00 0.00 1.73
404 405 9.031537 TGGTCTAGTAACATGACTTTCAGAATA 57.968 33.333 0.00 0.00 0.00 1.75
405 406 7.907389 TGGTCTAGTAACATGACTTTCAGAAT 58.093 34.615 0.00 0.00 0.00 2.40
406 407 7.297936 TGGTCTAGTAACATGACTTTCAGAA 57.702 36.000 0.00 0.00 0.00 3.02
407 408 6.911250 TGGTCTAGTAACATGACTTTCAGA 57.089 37.500 0.00 0.00 0.00 3.27
408 409 7.323420 TCATGGTCTAGTAACATGACTTTCAG 58.677 38.462 14.94 0.00 44.19 3.02
409 410 7.239763 TCATGGTCTAGTAACATGACTTTCA 57.760 36.000 14.94 0.00 44.19 2.69
416 417 9.477484 GTAGGTTTATCATGGTCTAGTAACATG 57.523 37.037 11.72 11.72 42.44 3.21
417 418 8.358148 CGTAGGTTTATCATGGTCTAGTAACAT 58.642 37.037 0.00 0.00 0.00 2.71
418 419 7.557358 TCGTAGGTTTATCATGGTCTAGTAACA 59.443 37.037 0.00 0.00 0.00 2.41
419 420 7.934457 TCGTAGGTTTATCATGGTCTAGTAAC 58.066 38.462 0.00 0.00 0.00 2.50
420 421 8.408601 GTTCGTAGGTTTATCATGGTCTAGTAA 58.591 37.037 0.00 0.00 0.00 2.24
421 422 7.776969 AGTTCGTAGGTTTATCATGGTCTAGTA 59.223 37.037 0.00 0.00 0.00 1.82
422 423 6.606395 AGTTCGTAGGTTTATCATGGTCTAGT 59.394 38.462 0.00 0.00 0.00 2.57
423 424 7.040473 AGTTCGTAGGTTTATCATGGTCTAG 57.960 40.000 0.00 0.00 0.00 2.43
424 425 8.573885 CATAGTTCGTAGGTTTATCATGGTCTA 58.426 37.037 0.00 0.00 0.00 2.59
425 426 5.934402 AGTTCGTAGGTTTATCATGGTCT 57.066 39.130 0.00 0.00 0.00 3.85
426 427 7.431249 TCATAGTTCGTAGGTTTATCATGGTC 58.569 38.462 0.00 0.00 0.00 4.02
427 428 7.356089 TCATAGTTCGTAGGTTTATCATGGT 57.644 36.000 0.00 0.00 0.00 3.55
428 429 6.868864 CCTCATAGTTCGTAGGTTTATCATGG 59.131 42.308 0.00 0.00 0.00 3.66
429 430 7.658261 TCCTCATAGTTCGTAGGTTTATCATG 58.342 38.462 0.00 0.00 0.00 3.07
430 431 7.834881 TCCTCATAGTTCGTAGGTTTATCAT 57.165 36.000 0.00 0.00 0.00 2.45
431 432 7.649533 TTCCTCATAGTTCGTAGGTTTATCA 57.350 36.000 0.00 0.00 0.00 2.15
432 433 6.641723 GCTTCCTCATAGTTCGTAGGTTTATC 59.358 42.308 0.00 0.00 0.00 1.75
433 434 6.097839 TGCTTCCTCATAGTTCGTAGGTTTAT 59.902 38.462 0.00 0.00 0.00 1.40
434 435 5.419788 TGCTTCCTCATAGTTCGTAGGTTTA 59.580 40.000 0.00 0.00 0.00 2.01
435 436 4.222145 TGCTTCCTCATAGTTCGTAGGTTT 59.778 41.667 0.00 0.00 0.00 3.27
436 437 3.767673 TGCTTCCTCATAGTTCGTAGGTT 59.232 43.478 0.00 0.00 0.00 3.50
437 438 3.362706 TGCTTCCTCATAGTTCGTAGGT 58.637 45.455 0.00 0.00 0.00 3.08
438 439 4.386867 TTGCTTCCTCATAGTTCGTAGG 57.613 45.455 0.00 0.00 0.00 3.18
439 440 5.592054 TCATTGCTTCCTCATAGTTCGTAG 58.408 41.667 0.00 0.00 0.00 3.51
440 441 5.592104 TCATTGCTTCCTCATAGTTCGTA 57.408 39.130 0.00 0.00 0.00 3.43
441 442 4.471904 TCATTGCTTCCTCATAGTTCGT 57.528 40.909 0.00 0.00 0.00 3.85
442 443 5.052481 TCATCATTGCTTCCTCATAGTTCG 58.948 41.667 0.00 0.00 0.00 3.95
443 444 6.054295 ACTCATCATTGCTTCCTCATAGTTC 58.946 40.000 0.00 0.00 0.00 3.01
444 445 5.999044 ACTCATCATTGCTTCCTCATAGTT 58.001 37.500 0.00 0.00 0.00 2.24
445 446 5.627182 ACTCATCATTGCTTCCTCATAGT 57.373 39.130 0.00 0.00 0.00 2.12
446 447 6.318144 ACAAACTCATCATTGCTTCCTCATAG 59.682 38.462 0.00 0.00 0.00 2.23
447 448 6.182627 ACAAACTCATCATTGCTTCCTCATA 58.817 36.000 0.00 0.00 0.00 2.15
448 449 5.014858 ACAAACTCATCATTGCTTCCTCAT 58.985 37.500 0.00 0.00 0.00 2.90
449 450 4.401022 ACAAACTCATCATTGCTTCCTCA 58.599 39.130 0.00 0.00 0.00 3.86
450 451 5.382618 AACAAACTCATCATTGCTTCCTC 57.617 39.130 0.00 0.00 0.00 3.71
451 452 5.796424 AAACAAACTCATCATTGCTTCCT 57.204 34.783 0.00 0.00 0.00 3.36
452 453 8.031277 AGATTAAACAAACTCATCATTGCTTCC 58.969 33.333 0.00 0.00 0.00 3.46
453 454 8.857216 CAGATTAAACAAACTCATCATTGCTTC 58.143 33.333 0.00 0.00 0.00 3.86
454 455 8.362639 ACAGATTAAACAAACTCATCATTGCTT 58.637 29.630 0.00 0.00 0.00 3.91
455 456 7.811236 CACAGATTAAACAAACTCATCATTGCT 59.189 33.333 0.00 0.00 0.00 3.91
456 457 7.411157 GCACAGATTAAACAAACTCATCATTGC 60.411 37.037 0.00 0.00 0.00 3.56
457 458 7.595875 TGCACAGATTAAACAAACTCATCATTG 59.404 33.333 0.00 0.00 0.00 2.82
458 459 7.660112 TGCACAGATTAAACAAACTCATCATT 58.340 30.769 0.00 0.00 0.00 2.57
459 460 7.218228 TGCACAGATTAAACAAACTCATCAT 57.782 32.000 0.00 0.00 0.00 2.45
460 461 6.631971 TGCACAGATTAAACAAACTCATCA 57.368 33.333 0.00 0.00 0.00 3.07
467 468 6.324561 TGTAGCATGCACAGATTAAACAAA 57.675 33.333 21.98 0.00 0.00 2.83
501 502 9.176460 ACACCACTATCTACTCTTTTCTACTAC 57.824 37.037 0.00 0.00 0.00 2.73
502 503 9.393512 GACACCACTATCTACTCTTTTCTACTA 57.606 37.037 0.00 0.00 0.00 1.82
503 504 7.889073 TGACACCACTATCTACTCTTTTCTACT 59.111 37.037 0.00 0.00 0.00 2.57
504 505 7.969508 GTGACACCACTATCTACTCTTTTCTAC 59.030 40.741 0.00 0.00 40.10 2.59
505 506 7.668469 TGTGACACCACTATCTACTCTTTTCTA 59.332 37.037 2.45 0.00 43.55 2.10
506 507 6.493802 TGTGACACCACTATCTACTCTTTTCT 59.506 38.462 2.45 0.00 43.55 2.52
536 537 1.434188 ACCCAGACATGTGTCCTTCA 58.566 50.000 1.15 0.00 45.85 3.02
537 538 2.224523 TGAACCCAGACATGTGTCCTTC 60.225 50.000 1.15 0.00 45.85 3.46
538 539 1.774254 TGAACCCAGACATGTGTCCTT 59.226 47.619 1.15 0.00 45.85 3.36
539 540 1.349026 CTGAACCCAGACATGTGTCCT 59.651 52.381 1.15 0.00 45.85 3.85
540 541 1.813513 CTGAACCCAGACATGTGTCC 58.186 55.000 1.15 0.00 45.85 4.02
541 542 1.160137 GCTGAACCCAGACATGTGTC 58.840 55.000 1.15 5.01 43.02 3.67
542 543 0.767375 AGCTGAACCCAGACATGTGT 59.233 50.000 1.15 0.00 43.02 3.72
543 544 1.002888 AGAGCTGAACCCAGACATGTG 59.997 52.381 1.15 0.00 43.02 3.21
544 545 1.356124 AGAGCTGAACCCAGACATGT 58.644 50.000 0.00 0.00 43.02 3.21
545 546 2.486472 AAGAGCTGAACCCAGACATG 57.514 50.000 0.00 0.00 43.02 3.21
546 547 3.445008 TCTAAGAGCTGAACCCAGACAT 58.555 45.455 0.00 0.00 43.02 3.06
547 548 2.889512 TCTAAGAGCTGAACCCAGACA 58.110 47.619 0.00 0.00 43.02 3.41
548 549 3.963428 TTCTAAGAGCTGAACCCAGAC 57.037 47.619 0.00 0.00 43.02 3.51
549 550 5.013079 TGAATTTCTAAGAGCTGAACCCAGA 59.987 40.000 0.00 0.00 43.02 3.86
564 565 7.862372 GTGTGAATGCTGAAACTTGAATTTCTA 59.138 33.333 0.00 0.00 39.02 2.10
567 568 6.256321 GTGTGTGAATGCTGAAACTTGAATTT 59.744 34.615 0.00 0.00 0.00 1.82
572 573 4.031418 TGTGTGTGAATGCTGAAACTTG 57.969 40.909 0.00 0.00 0.00 3.16
600 601 8.956533 AACATTGCCAAATTTGTACTAAAACT 57.043 26.923 16.73 0.00 0.00 2.66
605 606 7.596995 GCTACAAACATTGCCAAATTTGTACTA 59.403 33.333 18.88 6.29 42.06 1.82
659 660 4.142138 ACTTGACATTACCTAAGCTCTCCG 60.142 45.833 0.00 0.00 0.00 4.63
740 741 5.407407 ACTCTTCTCACGGTGAATTACAT 57.593 39.130 12.54 0.00 0.00 2.29
747 748 4.017126 ACATCATACTCTTCTCACGGTGA 58.983 43.478 10.88 10.88 0.00 4.02
749 750 3.429547 GCACATCATACTCTTCTCACGGT 60.430 47.826 0.00 0.00 0.00 4.83
854 855 2.969628 ATTACCGAGAGCTGAACCAG 57.030 50.000 0.00 0.00 34.12 4.00
895 896 2.470821 GCGACCAAATACAGATAGCGT 58.529 47.619 0.00 0.00 0.00 5.07
933 1696 0.731417 CACCAACTAGCAGCAGCATC 59.269 55.000 3.17 0.00 45.49 3.91
934 1697 0.679002 CCACCAACTAGCAGCAGCAT 60.679 55.000 3.17 0.00 45.49 3.79
935 1698 1.302752 CCACCAACTAGCAGCAGCA 60.303 57.895 3.17 0.00 45.49 4.41
936 1699 0.890996 AACCACCAACTAGCAGCAGC 60.891 55.000 0.00 0.00 42.56 5.25
1167 1930 1.216710 GAGAAGAGAGCACCCACCG 59.783 63.158 0.00 0.00 0.00 4.94
1212 1975 1.150567 CCAAGAGCGCGGAGAGAATG 61.151 60.000 8.83 0.00 0.00 2.67
1251 2014 3.494254 ACAACTCCCAACCCGCCA 61.494 61.111 0.00 0.00 0.00 5.69
1368 2131 2.860041 TCCCTAGGAGGAAGCTTAGAGT 59.140 50.000 11.48 0.00 37.67 3.24
1387 2150 1.648467 GAACAGAAGGCGGCACATCC 61.648 60.000 13.08 0.00 0.00 3.51
1688 2451 6.079336 TCTTATTATCCTACGGACCCATCAA 58.921 40.000 0.00 0.00 32.98 2.57
1698 2461 9.566530 CAGAGTTGATGATCTTATTATCCTACG 57.433 37.037 0.00 0.00 0.00 3.51
1813 2576 4.708177 AGCTAGCATAATCGTCAATTGGT 58.292 39.130 18.83 0.00 0.00 3.67
1970 2733 9.173939 GTGACAAATAACTGAATGAAACTCAAG 57.826 33.333 0.00 0.00 0.00 3.02
1971 2734 8.902806 AGTGACAAATAACTGAATGAAACTCAA 58.097 29.630 0.00 0.00 0.00 3.02
2054 2817 6.865834 AGGACTAAGATTCTCAGACAATGT 57.134 37.500 0.00 0.00 0.00 2.71
2061 2824 5.942826 AGGCAAAAAGGACTAAGATTCTCAG 59.057 40.000 0.00 0.00 0.00 3.35
2081 2844 4.559502 GCATAATCTCAGACGATACAGGCA 60.560 45.833 0.00 0.00 0.00 4.75
2082 2845 3.923461 GCATAATCTCAGACGATACAGGC 59.077 47.826 0.00 0.00 0.00 4.85
2125 2888 7.452562 TGAGCATCAACAAGGCATATAGATAA 58.547 34.615 0.00 0.00 45.97 1.75
2159 2922 4.711399 TCAACATCTCATTATCCTGCAGG 58.289 43.478 27.87 27.87 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.