Multiple sequence alignment - TraesCS6B01G133200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G133200 chr6B 100.000 2806 0 0 1 2806 130142335 130139530 0.000000e+00 5182.0
1 TraesCS6B01G133200 chr6B 92.330 352 27 0 2339 2690 130094053 130093702 4.170000e-138 501.0
2 TraesCS6B01G133200 chr6B 96.678 301 9 1 189 489 130163559 130163260 1.500000e-137 499.0
3 TraesCS6B01G133200 chr6B 90.294 340 30 2 1 340 691941346 691941682 2.570000e-120 442.0
4 TraesCS6B01G133200 chr6B 97.015 134 3 1 481 613 130157983 130157850 1.010000e-54 224.0
5 TraesCS6B01G133200 chr6B 97.619 42 1 0 1976 2017 130140077 130140036 3.880000e-09 73.1
6 TraesCS6B01G133200 chr6B 97.619 42 1 0 2259 2300 130140360 130140319 3.880000e-09 73.1
7 TraesCS6B01G133200 chr6D 92.642 1264 52 16 611 1845 58027966 58026715 0.000000e+00 1781.0
8 TraesCS6B01G133200 chr6D 89.632 299 9 5 325 610 301036534 301036245 7.390000e-96 361.0
9 TraesCS6B01G133200 chr6D 88.449 303 12 6 325 613 301039379 301039086 7.440000e-91 344.0
10 TraesCS6B01G133200 chr6D 92.469 239 10 5 1861 2092 58026573 58026336 4.480000e-88 335.0
11 TraesCS6B01G133200 chr6D 92.478 226 11 4 2115 2339 58026252 58026032 4.510000e-83 318.0
12 TraesCS6B01G133200 chr6D 82.258 124 13 4 2683 2806 266796253 266796139 6.400000e-17 99.0
13 TraesCS6B01G133200 chr6A 93.871 669 29 6 1429 2092 73366025 73365364 0.000000e+00 998.0
14 TraesCS6B01G133200 chr6A 88.174 668 28 17 773 1389 73367042 73366375 0.000000e+00 749.0
15 TraesCS6B01G133200 chr6A 83.987 637 69 20 1 610 30276765 30277395 5.210000e-162 580.0
16 TraesCS6B01G133200 chr6A 88.889 405 25 12 225 613 30263919 30264319 5.440000e-132 481.0
17 TraesCS6B01G133200 chr6A 82.316 475 67 15 2339 2806 617700535 617700071 2.030000e-106 396.0
18 TraesCS6B01G133200 chr6A 89.908 218 16 2 2133 2348 73365354 73365141 2.750000e-70 276.0
19 TraesCS6B01G133200 chr6A 84.490 245 34 4 2339 2581 617695416 617695174 3.610000e-59 239.0
20 TraesCS6B01G133200 chr6A 81.343 134 16 9 2673 2806 378196781 378196657 1.780000e-17 100.0
21 TraesCS6B01G133200 chr7D 85.835 473 58 6 2337 2806 431018550 431018084 6.980000e-136 494.0
22 TraesCS6B01G133200 chr1D 81.380 623 87 15 3 611 56526787 56527394 5.440000e-132 481.0
23 TraesCS6B01G133200 chr1D 93.960 298 9 2 325 613 56522977 56523274 2.570000e-120 442.0
24 TraesCS6B01G133200 chr4B 94.828 290 13 1 331 618 618256796 618257085 4.260000e-123 451.0
25 TraesCS6B01G133200 chr3B 86.649 382 38 8 1 380 792306515 792306885 7.230000e-111 411.0
26 TraesCS6B01G133200 chr3B 86.387 382 39 8 1 380 792392634 792393004 3.370000e-109 405.0
27 TraesCS6B01G133200 chr3B 86.126 382 40 8 1 380 793433582 793433212 1.570000e-107 399.0
28 TraesCS6B01G133200 chr3B 76.033 363 64 18 2451 2806 744966941 744966595 1.730000e-37 167.0
29 TraesCS6B01G133200 chrUn 86.387 382 39 8 1 380 154987717 154987347 3.370000e-109 405.0
30 TraesCS6B01G133200 chrUn 86.126 382 40 8 1 380 155069332 155068962 1.570000e-107 399.0
31 TraesCS6B01G133200 chrUn 82.961 358 41 11 1 350 78766 79111 3.510000e-79 305.0
32 TraesCS6B01G133200 chrUn 82.961 358 41 13 1 350 143175 143520 3.510000e-79 305.0
33 TraesCS6B01G133200 chr1A 86.723 354 39 7 1 350 5374925 5374576 1.220000e-103 387.0
34 TraesCS6B01G133200 chr7A 86.166 253 15 6 378 610 713905473 713905725 3.590000e-64 255.0
35 TraesCS6B01G133200 chr5B 77.808 365 59 15 2339 2689 374189675 374190031 3.660000e-49 206.0
36 TraesCS6B01G133200 chr4D 73.936 376 80 12 2433 2803 14566045 14566407 4.880000e-28 135.0
37 TraesCS6B01G133200 chr7B 74.834 302 51 17 2429 2722 689877607 689877323 2.280000e-21 113.0
38 TraesCS6B01G133200 chr1B 95.238 42 2 0 374 415 625017427 625017386 1.800000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G133200 chr6B 130139530 130142335 2805 True 1776.066667 5182 98.412667 1 2806 3 chr6B.!!$R4 2805
1 TraesCS6B01G133200 chr6D 58026032 58027966 1934 True 811.333333 1781 92.529667 611 2339 3 chr6D.!!$R2 1728
2 TraesCS6B01G133200 chr6D 301036245 301039379 3134 True 352.500000 361 89.040500 325 613 2 chr6D.!!$R3 288
3 TraesCS6B01G133200 chr6A 73365141 73367042 1901 True 674.333333 998 90.651000 773 2348 3 chr6A.!!$R4 1575
4 TraesCS6B01G133200 chr6A 30276765 30277395 630 False 580.000000 580 83.987000 1 610 1 chr6A.!!$F2 609
5 TraesCS6B01G133200 chr1D 56522977 56527394 4417 False 461.500000 481 87.670000 3 613 2 chr1D.!!$F1 610

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
23 24 0.179067 AAGGTTGAAGACGCGACCAA 60.179 50.0 15.93 4.43 43.56 3.67 F
1077 5305 0.393077 CGGCCATCCTAGGATTCGTT 59.607 55.0 22.29 0.00 31.62 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1140 5373 0.096976 GTGATCCGTGGCATTTGTCG 59.903 55.0 0.0 0.0 0.0 4.35 R
2352 7104 0.105039 GACTGGGGACGCATCTAAGG 59.895 60.0 0.0 0.0 0.0 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.599204 GAAGGTTGAAGACGCGACCA 60.599 55.000 15.93 0.00 43.56 4.02
23 24 0.179067 AAGGTTGAAGACGCGACCAA 60.179 50.000 15.93 4.43 43.56 3.67
24 25 0.600255 AGGTTGAAGACGCGACCAAG 60.600 55.000 15.93 0.00 43.56 3.61
25 26 0.599204 GGTTGAAGACGCGACCAAGA 60.599 55.000 15.93 0.00 41.23 3.02
31 32 1.179814 AGACGCGACCAAGAAGGAGT 61.180 55.000 15.93 0.00 41.22 3.85
55 56 2.426023 GTCAAGCCACGGACCAGT 59.574 61.111 0.00 0.00 0.00 4.00
56 57 1.227853 GTCAAGCCACGGACCAGTT 60.228 57.895 0.00 0.00 0.00 3.16
64 65 0.528901 CACGGACCAGTTGACGACAA 60.529 55.000 0.00 0.00 0.00 3.18
87 88 4.258543 CAAAGACGGTCCCTAAAATGCTA 58.741 43.478 4.14 0.00 0.00 3.49
89 90 2.159142 AGACGGTCCCTAAAATGCTACG 60.159 50.000 4.14 0.00 0.00 3.51
91 92 2.234414 ACGGTCCCTAAAATGCTACGAA 59.766 45.455 0.00 0.00 0.00 3.85
92 93 3.264104 CGGTCCCTAAAATGCTACGAAA 58.736 45.455 0.00 0.00 0.00 3.46
99 100 5.406649 CCTAAAATGCTACGAAAAATGGCA 58.593 37.500 0.00 0.00 37.99 4.92
102 103 6.610741 AAAATGCTACGAAAAATGGCAAAA 57.389 29.167 0.00 0.00 37.09 2.44
119 120 5.806366 GCAAAAGCAATGCCAAAGATTAT 57.194 34.783 0.00 0.00 37.85 1.28
120 121 5.565695 GCAAAAGCAATGCCAAAGATTATG 58.434 37.500 0.00 0.00 37.85 1.90
121 122 5.352016 GCAAAAGCAATGCCAAAGATTATGA 59.648 36.000 0.00 0.00 37.85 2.15
125 126 7.592885 AAGCAATGCCAAAGATTATGACTAT 57.407 32.000 0.00 0.00 0.00 2.12
128 129 7.286087 AGCAATGCCAAAGATTATGACTATGAA 59.714 33.333 0.00 0.00 0.00 2.57
142 143 7.981102 ATGACTATGAATAGTAGTAGTCGCA 57.019 36.000 2.97 0.00 43.27 5.10
150 151 6.041637 TGAATAGTAGTAGTCGCATTTGGGAT 59.958 38.462 0.39 0.00 39.23 3.85
158 159 0.394216 CGCATTTGGGATCCAGGTCA 60.394 55.000 15.23 0.00 33.81 4.02
168 169 2.092914 GGATCCAGGTCAAAACGAGGAT 60.093 50.000 6.95 0.00 40.43 3.24
173 174 3.138304 CAGGTCAAAACGAGGATGTCAA 58.862 45.455 0.00 0.00 0.00 3.18
181 182 2.457598 ACGAGGATGTCAAGCTTAGGA 58.542 47.619 0.00 0.00 0.00 2.94
190 192 3.274288 GTCAAGCTTAGGAGGGTGAATG 58.726 50.000 0.00 0.00 0.00 2.67
192 194 4.081087 GTCAAGCTTAGGAGGGTGAATGTA 60.081 45.833 0.00 0.00 0.00 2.29
204 206 6.018433 AGGGTGAATGTAAGGAATAAGCAT 57.982 37.500 0.00 0.00 0.00 3.79
209 211 7.189512 GTGAATGTAAGGAATAAGCATGACAC 58.810 38.462 0.00 0.00 0.00 3.67
210 212 6.318648 TGAATGTAAGGAATAAGCATGACACC 59.681 38.462 0.00 0.00 0.00 4.16
217 219 3.603158 ATAAGCATGACACCGTGTACA 57.397 42.857 3.58 5.30 0.00 2.90
219 221 2.010145 AGCATGACACCGTGTACATC 57.990 50.000 3.58 0.00 0.00 3.06
220 222 1.275010 AGCATGACACCGTGTACATCA 59.725 47.619 3.58 0.00 0.00 3.07
247 261 3.957671 CGTATCCGTGTAGTGCTAGAA 57.042 47.619 0.00 0.00 0.00 2.10
248 262 3.615614 CGTATCCGTGTAGTGCTAGAAC 58.384 50.000 0.00 0.00 0.00 3.01
249 263 3.311871 CGTATCCGTGTAGTGCTAGAACT 59.688 47.826 8.84 8.84 0.00 3.01
251 265 2.089980 TCCGTGTAGTGCTAGAACTCC 58.910 52.381 6.66 0.00 0.00 3.85
252 266 2.093106 CCGTGTAGTGCTAGAACTCCT 58.907 52.381 6.66 0.00 0.00 3.69
254 268 3.312973 CCGTGTAGTGCTAGAACTCCTAG 59.687 52.174 6.66 0.00 46.05 3.02
272 286 4.752661 CTAGCCGACTAGGTTAGCTAAG 57.247 50.000 6.38 0.00 44.89 2.18
273 287 2.308690 AGCCGACTAGGTTAGCTAAGG 58.691 52.381 6.38 3.86 43.70 2.69
274 288 2.030371 GCCGACTAGGTTAGCTAAGGT 58.970 52.381 6.38 3.89 43.70 3.50
275 289 3.117738 AGCCGACTAGGTTAGCTAAGGTA 60.118 47.826 6.38 0.58 43.70 3.08
276 290 3.252944 GCCGACTAGGTTAGCTAAGGTAG 59.747 52.174 6.38 12.54 43.70 3.18
277 291 3.252944 CCGACTAGGTTAGCTAAGGTAGC 59.747 52.174 6.38 6.45 43.03 3.58
320 335 5.427036 ACACGTACACCCTGTAATTTTTG 57.573 39.130 0.00 0.00 34.21 2.44
321 336 4.883006 ACACGTACACCCTGTAATTTTTGT 59.117 37.500 0.00 0.00 34.21 2.83
323 338 6.711645 ACACGTACACCCTGTAATTTTTGTAT 59.288 34.615 0.00 0.00 34.21 2.29
447 4624 2.659244 GTTTCGCCGACCACGTCA 60.659 61.111 0.00 0.00 37.88 4.35
583 4773 0.467384 CACATAGTGCTCCTGGGAGG 59.533 60.000 17.16 3.33 42.19 4.30
622 4812 1.006998 AGCCAACATTGCCCCATTCTA 59.993 47.619 0.00 0.00 0.00 2.10
937 5149 9.763837 ATATATATACACACCCTAGCTGTACAA 57.236 33.333 0.00 0.00 0.00 2.41
952 5164 4.708601 CTGTACAACACGCATTTTAGTCC 58.291 43.478 0.00 0.00 0.00 3.85
1077 5305 0.393077 CGGCCATCCTAGGATTCGTT 59.607 55.000 22.29 0.00 31.62 3.85
1140 5373 1.737363 GCTAGCTCCAGTGTGCAGTAC 60.737 57.143 7.70 0.00 33.44 2.73
1145 5378 0.747852 TCCAGTGTGCAGTACGACAA 59.252 50.000 0.00 0.00 0.00 3.18
1146 5379 1.137282 TCCAGTGTGCAGTACGACAAA 59.863 47.619 0.00 0.00 0.00 2.83
1151 5384 0.871722 GTGCAGTACGACAAATGCCA 59.128 50.000 0.00 0.00 37.89 4.92
1204 5445 0.602638 CTGCAGTCGTTTGCTGGGTA 60.603 55.000 5.25 0.00 44.38 3.69
1384 5625 3.554692 CTTCGCCGTCGCCATGTC 61.555 66.667 0.00 0.00 35.26 3.06
1414 5655 0.457035 TGGTACGACGCATTACCCTC 59.543 55.000 9.83 0.00 37.54 4.30
1417 5658 1.674962 GTACGACGCATTACCCTCTCT 59.325 52.381 0.00 0.00 0.00 3.10
1420 5661 1.002251 CGACGCATTACCCTCTCTCTC 60.002 57.143 0.00 0.00 0.00 3.20
1427 5670 5.381757 GCATTACCCTCTCTCTCTCTCTAA 58.618 45.833 0.00 0.00 0.00 2.10
1440 5991 7.685481 TCTCTCTCTCTAAACTTTCTCTCTCA 58.315 38.462 0.00 0.00 0.00 3.27
1458 6009 6.168389 TCTCTCATGTCTAACGTGTAGTGTA 58.832 40.000 0.00 0.00 36.53 2.90
1459 6010 6.091849 TCTCTCATGTCTAACGTGTAGTGTAC 59.908 42.308 0.00 0.00 36.53 2.90
1460 6011 5.702209 TCTCATGTCTAACGTGTAGTGTACA 59.298 40.000 0.00 0.00 36.53 2.90
1501 6057 0.752658 ATCCTGATGTTCATCGCGGA 59.247 50.000 18.64 18.64 0.00 5.54
1562 6118 2.815647 CGGAAGCCGGCTGAAGAC 60.816 66.667 33.60 18.27 44.15 3.01
1594 6150 2.815647 GGAGTGCTACGTGCTGCC 60.816 66.667 0.00 0.03 43.37 4.85
1741 6297 4.858680 GCCGCCCTACTTCCAGGC 62.859 72.222 0.00 0.00 43.53 4.85
1742 6298 4.176752 CCGCCCTACTTCCAGGCC 62.177 72.222 0.00 0.00 44.13 5.19
1743 6299 4.176752 CGCCCTACTTCCAGGCCC 62.177 72.222 0.00 0.00 44.13 5.80
1744 6300 3.015145 GCCCTACTTCCAGGCCCA 61.015 66.667 0.00 0.00 41.00 5.36
1745 6301 3.049080 GCCCTACTTCCAGGCCCAG 62.049 68.421 0.00 0.00 41.00 4.45
1746 6302 2.592308 CCTACTTCCAGGCCCAGC 59.408 66.667 0.00 0.00 0.00 4.85
1819 6375 2.280628 CGTATGAACCAAGCTCTTCCC 58.719 52.381 0.00 0.00 0.00 3.97
1845 6401 4.999311 GCCTTGGAATTTTGAGAATTGCTT 59.001 37.500 2.02 0.00 0.00 3.91
1847 6403 6.091305 GCCTTGGAATTTTGAGAATTGCTTAC 59.909 38.462 2.02 0.00 0.00 2.34
1886 6568 9.981114 AGAATTTGTAAAGTTTTAATGGACCAG 57.019 29.630 0.00 0.00 0.00 4.00
2074 6765 9.832445 TGTTAGTTTAGTGATCAAGAAGAAACT 57.168 29.630 18.10 18.10 38.70 2.66
2097 6788 8.506168 ACTAACATATTTGGTGTCTATTGGTG 57.494 34.615 0.00 0.00 0.00 4.17
2099 6790 7.391148 AACATATTTGGTGTCTATTGGTGTC 57.609 36.000 0.00 0.00 0.00 3.67
2100 6791 6.480763 ACATATTTGGTGTCTATTGGTGTCA 58.519 36.000 0.00 0.00 0.00 3.58
2101 6792 6.945435 ACATATTTGGTGTCTATTGGTGTCAA 59.055 34.615 0.00 0.00 37.28 3.18
2102 6793 7.450014 ACATATTTGGTGTCTATTGGTGTCAAA 59.550 33.333 0.00 0.00 36.36 2.69
2103 6794 6.723298 ATTTGGTGTCTATTGGTGTCAAAA 57.277 33.333 0.00 0.00 36.36 2.44
2104 6795 6.531503 TTTGGTGTCTATTGGTGTCAAAAA 57.468 33.333 0.00 0.00 36.36 1.94
2129 6881 6.917533 ACGTATTACATTATAAGACGGAGGG 58.082 40.000 15.64 0.00 43.68 4.30
2149 6901 7.344134 GGAGGGAGTAGTTGTTTATGGTTTAT 58.656 38.462 0.00 0.00 0.00 1.40
2176 6928 2.625314 GAGAAGGGCAAGCAAGACTTTT 59.375 45.455 0.00 0.00 36.04 2.27
2182 6934 7.834181 AGAAGGGCAAGCAAGACTTTTTATATA 59.166 33.333 0.00 0.00 36.04 0.86
2183 6935 8.539117 AAGGGCAAGCAAGACTTTTTATATAT 57.461 30.769 0.00 0.00 36.04 0.86
2184 6936 9.640952 AAGGGCAAGCAAGACTTTTTATATATA 57.359 29.630 0.00 0.00 36.04 0.86
2185 6937 9.813826 AGGGCAAGCAAGACTTTTTATATATAT 57.186 29.630 0.00 0.00 36.04 0.86
2186 6938 9.846248 GGGCAAGCAAGACTTTTTATATATATG 57.154 33.333 5.44 0.00 36.04 1.78
2187 6939 9.346725 GGCAAGCAAGACTTTTTATATATATGC 57.653 33.333 5.44 0.00 36.04 3.14
2201 6953 0.744414 ATATGCGCCGCACAGACTTT 60.744 50.000 16.70 0.00 43.04 2.66
2278 7030 9.799106 CAGGTAATAGGAATATTCAGTGGAATT 57.201 33.333 17.07 8.83 40.87 2.17
2328 7080 5.989168 TGTGACACAAAATAATCTGACTCGT 59.011 36.000 5.62 0.00 0.00 4.18
2342 7094 8.622948 AATCTGACTCGTGATATATAGTGTCA 57.377 34.615 14.19 14.19 36.25 3.58
2344 7096 6.651225 TCTGACTCGTGATATATAGTGTCAGG 59.349 42.308 26.25 12.03 46.49 3.86
2345 7097 5.705905 TGACTCGTGATATATAGTGTCAGGG 59.294 44.000 12.33 1.00 35.38 4.45
2346 7098 5.877491 ACTCGTGATATATAGTGTCAGGGA 58.123 41.667 5.24 0.00 35.38 4.20
2347 7099 5.706369 ACTCGTGATATATAGTGTCAGGGAC 59.294 44.000 5.24 0.00 35.38 4.46
2348 7100 5.008331 TCGTGATATATAGTGTCAGGGACC 58.992 45.833 5.24 0.00 35.38 4.46
2349 7101 4.158025 CGTGATATATAGTGTCAGGGACCC 59.842 50.000 0.59 0.59 32.30 4.46
2350 7102 5.084519 GTGATATATAGTGTCAGGGACCCA 58.915 45.833 14.60 0.00 0.00 4.51
2351 7103 5.542635 GTGATATATAGTGTCAGGGACCCAA 59.457 44.000 14.60 0.00 0.00 4.12
2352 7104 5.542635 TGATATATAGTGTCAGGGACCCAAC 59.457 44.000 14.60 11.18 0.00 3.77
2353 7105 1.286248 ATAGTGTCAGGGACCCAACC 58.714 55.000 14.60 5.07 0.00 3.77
2354 7106 0.192566 TAGTGTCAGGGACCCAACCT 59.807 55.000 14.60 11.61 39.43 3.50
2355 7107 0.697854 AGTGTCAGGGACCCAACCTT 60.698 55.000 14.60 0.00 35.78 3.50
2356 7108 1.061546 GTGTCAGGGACCCAACCTTA 58.938 55.000 14.60 0.00 35.78 2.69
2357 7109 1.003233 GTGTCAGGGACCCAACCTTAG 59.997 57.143 14.60 0.00 35.78 2.18
2358 7110 1.132657 TGTCAGGGACCCAACCTTAGA 60.133 52.381 14.60 0.00 35.78 2.10
2359 7111 2.197465 GTCAGGGACCCAACCTTAGAT 58.803 52.381 14.60 0.00 35.78 1.98
2360 7112 2.092914 GTCAGGGACCCAACCTTAGATG 60.093 54.545 14.60 0.00 35.78 2.90
2361 7113 0.919710 AGGGACCCAACCTTAGATGC 59.080 55.000 14.60 0.00 33.64 3.91
2362 7114 0.463833 GGGACCCAACCTTAGATGCG 60.464 60.000 5.33 0.00 0.00 4.73
2363 7115 0.252197 GGACCCAACCTTAGATGCGT 59.748 55.000 0.00 0.00 0.00 5.24
2364 7116 1.653151 GACCCAACCTTAGATGCGTC 58.347 55.000 0.00 0.00 0.00 5.19
2365 7117 0.252197 ACCCAACCTTAGATGCGTCC 59.748 55.000 1.23 0.00 0.00 4.79
2366 7118 0.463833 CCCAACCTTAGATGCGTCCC 60.464 60.000 1.23 0.00 0.00 4.46
2367 7119 0.463833 CCAACCTTAGATGCGTCCCC 60.464 60.000 1.23 0.00 0.00 4.81
2368 7120 0.251916 CAACCTTAGATGCGTCCCCA 59.748 55.000 1.23 0.00 0.00 4.96
2369 7121 0.541863 AACCTTAGATGCGTCCCCAG 59.458 55.000 1.23 0.00 0.00 4.45
2370 7122 0.617820 ACCTTAGATGCGTCCCCAGT 60.618 55.000 1.23 0.00 0.00 4.00
2371 7123 0.105039 CCTTAGATGCGTCCCCAGTC 59.895 60.000 1.23 0.00 0.00 3.51
2372 7124 0.249073 CTTAGATGCGTCCCCAGTCG 60.249 60.000 1.23 0.00 0.00 4.18
2373 7125 0.681887 TTAGATGCGTCCCCAGTCGA 60.682 55.000 1.23 0.00 0.00 4.20
2374 7126 1.381928 TAGATGCGTCCCCAGTCGAC 61.382 60.000 7.70 7.70 0.00 4.20
2375 7127 2.994995 ATGCGTCCCCAGTCGACA 60.995 61.111 19.50 0.00 0.00 4.35
2376 7128 2.890847 GATGCGTCCCCAGTCGACAG 62.891 65.000 19.50 10.04 0.00 3.51
2377 7129 3.371063 GCGTCCCCAGTCGACAGA 61.371 66.667 19.50 5.92 0.00 3.41
2378 7130 2.927580 GCGTCCCCAGTCGACAGAA 61.928 63.158 19.50 0.00 0.00 3.02
2379 7131 1.890894 CGTCCCCAGTCGACAGAAT 59.109 57.895 19.50 0.00 0.00 2.40
2380 7132 0.179134 CGTCCCCAGTCGACAGAATC 60.179 60.000 19.50 2.69 0.00 2.52
2381 7133 0.895530 GTCCCCAGTCGACAGAATCA 59.104 55.000 19.50 0.00 0.00 2.57
2382 7134 1.482593 GTCCCCAGTCGACAGAATCAT 59.517 52.381 19.50 0.00 0.00 2.45
2383 7135 1.482182 TCCCCAGTCGACAGAATCATG 59.518 52.381 19.50 4.99 0.00 3.07
2384 7136 1.473965 CCCCAGTCGACAGAATCATGG 60.474 57.143 19.50 14.10 0.00 3.66
2385 7137 1.293924 CCAGTCGACAGAATCATGGC 58.706 55.000 19.50 0.00 0.00 4.40
2386 7138 1.293924 CAGTCGACAGAATCATGGCC 58.706 55.000 19.50 0.00 0.00 5.36
2397 7149 2.414994 ATCATGGCCAAGTCAGTGAG 57.585 50.000 10.96 0.00 0.00 3.51
2398 7150 1.351076 TCATGGCCAAGTCAGTGAGA 58.649 50.000 10.96 0.00 0.00 3.27
2399 7151 1.277273 TCATGGCCAAGTCAGTGAGAG 59.723 52.381 10.96 0.00 0.00 3.20
2400 7152 0.617413 ATGGCCAAGTCAGTGAGAGG 59.383 55.000 10.96 0.00 0.00 3.69
2401 7153 1.298014 GGCCAAGTCAGTGAGAGGG 59.702 63.158 0.00 0.00 0.00 4.30
2402 7154 1.298014 GCCAAGTCAGTGAGAGGGG 59.702 63.158 0.00 0.00 0.00 4.79
2403 7155 1.194781 GCCAAGTCAGTGAGAGGGGA 61.195 60.000 0.00 0.00 0.00 4.81
2404 7156 0.610687 CCAAGTCAGTGAGAGGGGAC 59.389 60.000 0.00 0.00 0.00 4.46
2405 7157 1.342074 CAAGTCAGTGAGAGGGGACA 58.658 55.000 0.00 0.00 32.79 4.02
2406 7158 1.274728 CAAGTCAGTGAGAGGGGACAG 59.725 57.143 0.00 0.00 32.79 3.51
2407 7159 0.902516 AGTCAGTGAGAGGGGACAGC 60.903 60.000 0.00 0.00 32.79 4.40
2408 7160 1.979155 TCAGTGAGAGGGGACAGCG 60.979 63.158 0.00 0.00 0.00 5.18
2409 7161 2.118513 AGTGAGAGGGGACAGCGT 59.881 61.111 0.00 0.00 0.00 5.07
2410 7162 2.262915 GTGAGAGGGGACAGCGTG 59.737 66.667 0.00 0.00 0.00 5.34
2411 7163 2.997315 TGAGAGGGGACAGCGTGG 60.997 66.667 0.00 0.00 0.00 4.94
2412 7164 4.459089 GAGAGGGGACAGCGTGGC 62.459 72.222 0.00 0.00 0.00 5.01
2414 7166 4.767255 GAGGGGACAGCGTGGCAG 62.767 72.222 0.00 0.00 0.00 4.85
2422 7174 4.749310 AGCGTGGCAGCGGAAGAG 62.749 66.667 10.56 0.00 43.00 2.85
2425 7177 3.426568 GTGGCAGCGGAAGAGCAC 61.427 66.667 0.00 0.00 40.15 4.40
2426 7178 4.704833 TGGCAGCGGAAGAGCACC 62.705 66.667 0.00 0.00 40.15 5.01
2427 7179 4.400961 GGCAGCGGAAGAGCACCT 62.401 66.667 0.00 0.00 40.15 4.00
2428 7180 2.359230 GCAGCGGAAGAGCACCTT 60.359 61.111 0.00 0.00 40.15 3.50
2429 7181 1.968540 GCAGCGGAAGAGCACCTTT 60.969 57.895 0.00 0.00 40.15 3.11
2430 7182 1.916697 GCAGCGGAAGAGCACCTTTC 61.917 60.000 0.00 0.00 40.15 2.62
2431 7183 1.003233 AGCGGAAGAGCACCTTTCC 60.003 57.895 0.00 0.00 40.15 3.13
2432 7184 1.302511 GCGGAAGAGCACCTTTCCA 60.303 57.895 4.37 0.00 34.68 3.53
2433 7185 1.578206 GCGGAAGAGCACCTTTCCAC 61.578 60.000 4.37 0.00 34.68 4.02
2434 7186 0.955919 CGGAAGAGCACCTTTCCACC 60.956 60.000 4.37 0.00 34.68 4.61
2435 7187 0.110486 GGAAGAGCACCTTTCCACCA 59.890 55.000 0.00 0.00 34.68 4.17
2436 7188 1.528129 GAAGAGCACCTTTCCACCAG 58.472 55.000 0.00 0.00 34.68 4.00
2437 7189 0.846693 AAGAGCACCTTTCCACCAGT 59.153 50.000 0.00 0.00 0.00 4.00
2438 7190 0.398318 AGAGCACCTTTCCACCAGTC 59.602 55.000 0.00 0.00 0.00 3.51
2439 7191 0.108585 GAGCACCTTTCCACCAGTCA 59.891 55.000 0.00 0.00 0.00 3.41
2440 7192 0.109342 AGCACCTTTCCACCAGTCAG 59.891 55.000 0.00 0.00 0.00 3.51
2441 7193 0.890996 GCACCTTTCCACCAGTCAGG 60.891 60.000 0.00 0.00 45.67 3.86
2442 7194 0.250901 CACCTTTCCACCAGTCAGGG 60.251 60.000 0.00 0.00 43.89 4.45
2443 7195 1.380302 CCTTTCCACCAGTCAGGGG 59.620 63.158 0.00 0.00 43.89 4.79
2444 7196 1.303643 CTTTCCACCAGTCAGGGGC 60.304 63.158 0.00 0.00 40.60 5.80
2445 7197 2.067932 CTTTCCACCAGTCAGGGGCA 62.068 60.000 0.00 0.00 40.60 5.36
2446 7198 2.067932 TTTCCACCAGTCAGGGGCAG 62.068 60.000 0.00 0.00 40.60 4.85
2447 7199 4.039092 CCACCAGTCAGGGGCAGG 62.039 72.222 0.00 0.00 40.60 4.85
2448 7200 4.039092 CACCAGTCAGGGGCAGGG 62.039 72.222 0.00 0.00 43.89 4.45
2461 7213 4.899239 CAGGGGCGCGTCATCTCC 62.899 72.222 14.93 3.88 0.00 3.71
2463 7215 4.467084 GGGGCGCGTCATCTCCAA 62.467 66.667 14.93 0.00 0.00 3.53
2464 7216 2.892425 GGGCGCGTCATCTCCAAG 60.892 66.667 14.93 0.00 0.00 3.61
2465 7217 3.567797 GGCGCGTCATCTCCAAGC 61.568 66.667 5.47 0.00 0.00 4.01
2466 7218 3.567797 GCGCGTCATCTCCAAGCC 61.568 66.667 8.43 0.00 0.00 4.35
2467 7219 2.125552 CGCGTCATCTCCAAGCCA 60.126 61.111 0.00 0.00 0.00 4.75
2468 7220 2.456119 CGCGTCATCTCCAAGCCAC 61.456 63.158 0.00 0.00 0.00 5.01
2469 7221 2.109126 GCGTCATCTCCAAGCCACC 61.109 63.158 0.00 0.00 0.00 4.61
2470 7222 1.599047 CGTCATCTCCAAGCCACCT 59.401 57.895 0.00 0.00 0.00 4.00
2471 7223 0.460987 CGTCATCTCCAAGCCACCTC 60.461 60.000 0.00 0.00 0.00 3.85
2472 7224 0.615331 GTCATCTCCAAGCCACCTCA 59.385 55.000 0.00 0.00 0.00 3.86
2473 7225 0.907486 TCATCTCCAAGCCACCTCAG 59.093 55.000 0.00 0.00 0.00 3.35
2474 7226 0.907486 CATCTCCAAGCCACCTCAGA 59.093 55.000 0.00 0.00 0.00 3.27
2475 7227 1.489649 CATCTCCAAGCCACCTCAGAT 59.510 52.381 0.00 0.00 0.00 2.90
2476 7228 1.198713 TCTCCAAGCCACCTCAGATC 58.801 55.000 0.00 0.00 0.00 2.75
2477 7229 0.907486 CTCCAAGCCACCTCAGATCA 59.093 55.000 0.00 0.00 0.00 2.92
2478 7230 1.280133 CTCCAAGCCACCTCAGATCAA 59.720 52.381 0.00 0.00 0.00 2.57
2479 7231 1.280133 TCCAAGCCACCTCAGATCAAG 59.720 52.381 0.00 0.00 0.00 3.02
2480 7232 1.093159 CAAGCCACCTCAGATCAAGC 58.907 55.000 0.00 0.00 0.00 4.01
2481 7233 0.694771 AAGCCACCTCAGATCAAGCA 59.305 50.000 0.00 0.00 0.00 3.91
2482 7234 0.694771 AGCCACCTCAGATCAAGCAA 59.305 50.000 0.00 0.00 0.00 3.91
2483 7235 0.807496 GCCACCTCAGATCAAGCAAC 59.193 55.000 0.00 0.00 0.00 4.17
2484 7236 1.457346 CCACCTCAGATCAAGCAACC 58.543 55.000 0.00 0.00 0.00 3.77
2485 7237 1.081892 CACCTCAGATCAAGCAACCG 58.918 55.000 0.00 0.00 0.00 4.44
2486 7238 0.976641 ACCTCAGATCAAGCAACCGA 59.023 50.000 0.00 0.00 0.00 4.69
2487 7239 1.347707 ACCTCAGATCAAGCAACCGAA 59.652 47.619 0.00 0.00 0.00 4.30
2488 7240 1.734465 CCTCAGATCAAGCAACCGAAC 59.266 52.381 0.00 0.00 0.00 3.95
2489 7241 1.734465 CTCAGATCAAGCAACCGAACC 59.266 52.381 0.00 0.00 0.00 3.62
2490 7242 0.443869 CAGATCAAGCAACCGAACCG 59.556 55.000 0.00 0.00 0.00 4.44
2491 7243 1.134694 GATCAAGCAACCGAACCGC 59.865 57.895 0.00 0.00 0.00 5.68
2492 7244 1.573829 GATCAAGCAACCGAACCGCA 61.574 55.000 0.00 0.00 0.00 5.69
2493 7245 1.577328 ATCAAGCAACCGAACCGCAG 61.577 55.000 0.00 0.00 0.00 5.18
2518 7270 4.754667 GGCCCGGAGTGGTCGAAC 62.755 72.222 0.73 0.00 35.15 3.95
2521 7273 4.052229 CCGGAGTGGTCGAACGCT 62.052 66.667 18.14 18.14 0.00 5.07
2522 7274 2.693762 CCGGAGTGGTCGAACGCTA 61.694 63.158 18.11 0.00 0.00 4.26
2523 7275 1.513586 CGGAGTGGTCGAACGCTAC 60.514 63.158 18.11 17.34 0.00 3.58
2524 7276 1.582968 GGAGTGGTCGAACGCTACA 59.417 57.895 21.49 0.00 32.02 2.74
2525 7277 0.172803 GGAGTGGTCGAACGCTACAT 59.827 55.000 21.49 0.00 32.02 2.29
2526 7278 1.402968 GGAGTGGTCGAACGCTACATA 59.597 52.381 21.49 0.00 32.02 2.29
2527 7279 2.159338 GGAGTGGTCGAACGCTACATAA 60.159 50.000 21.49 0.00 32.02 1.90
2528 7280 3.106672 GAGTGGTCGAACGCTACATAAG 58.893 50.000 18.11 0.00 0.00 1.73
2541 7293 4.582701 CTACATAAGCTGAGAGGAGTGG 57.417 50.000 0.00 0.00 0.00 4.00
2542 7294 1.484240 ACATAAGCTGAGAGGAGTGGC 59.516 52.381 0.00 0.00 0.00 5.01
2543 7295 1.761784 CATAAGCTGAGAGGAGTGGCT 59.238 52.381 0.00 0.00 34.52 4.75
2544 7296 2.828661 TAAGCTGAGAGGAGTGGCTA 57.171 50.000 0.00 0.00 32.64 3.93
2545 7297 1.484038 AAGCTGAGAGGAGTGGCTAG 58.516 55.000 0.00 0.00 32.64 3.42
2546 7298 0.334676 AGCTGAGAGGAGTGGCTAGT 59.665 55.000 0.00 0.00 0.00 2.57
2547 7299 1.190643 GCTGAGAGGAGTGGCTAGTT 58.809 55.000 0.00 0.00 0.00 2.24
2548 7300 1.136110 GCTGAGAGGAGTGGCTAGTTC 59.864 57.143 0.00 0.00 0.00 3.01
2549 7301 1.403679 CTGAGAGGAGTGGCTAGTTCG 59.596 57.143 0.00 0.00 0.00 3.95
2550 7302 1.004394 TGAGAGGAGTGGCTAGTTCGA 59.996 52.381 0.00 0.00 0.00 3.71
2551 7303 1.402613 GAGAGGAGTGGCTAGTTCGAC 59.597 57.143 0.00 0.00 0.00 4.20
2552 7304 1.174783 GAGGAGTGGCTAGTTCGACA 58.825 55.000 0.00 0.00 0.00 4.35
2553 7305 1.751924 GAGGAGTGGCTAGTTCGACAT 59.248 52.381 0.00 0.00 0.00 3.06
2554 7306 1.751924 AGGAGTGGCTAGTTCGACATC 59.248 52.381 0.00 0.00 0.00 3.06
2555 7307 1.751924 GGAGTGGCTAGTTCGACATCT 59.248 52.381 0.00 0.00 0.00 2.90
2556 7308 2.950309 GGAGTGGCTAGTTCGACATCTA 59.050 50.000 0.00 0.00 0.00 1.98
2557 7309 3.003897 GGAGTGGCTAGTTCGACATCTAG 59.996 52.174 11.70 11.70 37.34 2.43
2558 7310 3.622630 AGTGGCTAGTTCGACATCTAGT 58.377 45.455 15.27 0.00 36.84 2.57
2559 7311 3.378742 AGTGGCTAGTTCGACATCTAGTG 59.621 47.826 15.27 0.00 36.84 2.74
2560 7312 2.688446 TGGCTAGTTCGACATCTAGTGG 59.312 50.000 15.27 0.00 36.84 4.00
2561 7313 2.034812 GGCTAGTTCGACATCTAGTGGG 59.965 54.545 15.27 0.00 36.84 4.61
2562 7314 2.950309 GCTAGTTCGACATCTAGTGGGA 59.050 50.000 15.27 0.00 36.84 4.37
2563 7315 3.570550 GCTAGTTCGACATCTAGTGGGAT 59.429 47.826 15.27 0.00 36.84 3.85
2564 7316 4.320641 GCTAGTTCGACATCTAGTGGGATC 60.321 50.000 15.27 0.00 36.84 3.36
2565 7317 3.632333 AGTTCGACATCTAGTGGGATCA 58.368 45.455 0.00 0.00 0.00 2.92
2566 7318 3.634448 AGTTCGACATCTAGTGGGATCAG 59.366 47.826 0.00 0.00 0.00 2.90
2567 7319 2.587522 TCGACATCTAGTGGGATCAGG 58.412 52.381 0.00 0.00 0.00 3.86
2568 7320 1.000283 CGACATCTAGTGGGATCAGGC 60.000 57.143 0.00 0.00 0.00 4.85
2569 7321 2.042464 GACATCTAGTGGGATCAGGCA 58.958 52.381 0.00 0.00 0.00 4.75
2570 7322 2.435805 GACATCTAGTGGGATCAGGCAA 59.564 50.000 0.00 0.00 0.00 4.52
2571 7323 2.171448 ACATCTAGTGGGATCAGGCAAC 59.829 50.000 0.00 0.00 0.00 4.17
2572 7324 0.824109 TCTAGTGGGATCAGGCAACG 59.176 55.000 0.00 0.00 46.39 4.10
2573 7325 0.179073 CTAGTGGGATCAGGCAACGG 60.179 60.000 0.00 0.00 46.39 4.44
2574 7326 2.252072 TAGTGGGATCAGGCAACGGC 62.252 60.000 0.00 0.00 46.39 5.68
2575 7327 3.645660 TGGGATCAGGCAACGGCA 61.646 61.111 0.00 0.00 43.71 5.69
2576 7328 3.134127 GGGATCAGGCAACGGCAC 61.134 66.667 0.00 0.00 43.71 5.01
2600 7352 3.195041 GGCACGGCTTTCCTTTTTC 57.805 52.632 0.00 0.00 0.00 2.29
2601 7353 0.319555 GGCACGGCTTTCCTTTTTCC 60.320 55.000 0.00 0.00 0.00 3.13
2602 7354 0.673985 GCACGGCTTTCCTTTTTCCT 59.326 50.000 0.00 0.00 0.00 3.36
2603 7355 1.068588 GCACGGCTTTCCTTTTTCCTT 59.931 47.619 0.00 0.00 0.00 3.36
2604 7356 2.862530 GCACGGCTTTCCTTTTTCCTTC 60.863 50.000 0.00 0.00 0.00 3.46
2605 7357 2.623416 CACGGCTTTCCTTTTTCCTTCT 59.377 45.455 0.00 0.00 0.00 2.85
2606 7358 3.068165 CACGGCTTTCCTTTTTCCTTCTT 59.932 43.478 0.00 0.00 0.00 2.52
2607 7359 3.318275 ACGGCTTTCCTTTTTCCTTCTTC 59.682 43.478 0.00 0.00 0.00 2.87
2608 7360 3.570125 CGGCTTTCCTTTTTCCTTCTTCT 59.430 43.478 0.00 0.00 0.00 2.85
2609 7361 4.038042 CGGCTTTCCTTTTTCCTTCTTCTT 59.962 41.667 0.00 0.00 0.00 2.52
2610 7362 5.451937 CGGCTTTCCTTTTTCCTTCTTCTTT 60.452 40.000 0.00 0.00 0.00 2.52
2611 7363 5.986135 GGCTTTCCTTTTTCCTTCTTCTTTC 59.014 40.000 0.00 0.00 0.00 2.62
2612 7364 6.183360 GGCTTTCCTTTTTCCTTCTTCTTTCT 60.183 38.462 0.00 0.00 0.00 2.52
2613 7365 7.268586 GCTTTCCTTTTTCCTTCTTCTTTCTT 58.731 34.615 0.00 0.00 0.00 2.52
2614 7366 7.766278 GCTTTCCTTTTTCCTTCTTCTTTCTTT 59.234 33.333 0.00 0.00 0.00 2.52
2615 7367 9.307121 CTTTCCTTTTTCCTTCTTCTTTCTTTC 57.693 33.333 0.00 0.00 0.00 2.62
2616 7368 7.348080 TCCTTTTTCCTTCTTCTTTCTTTCC 57.652 36.000 0.00 0.00 0.00 3.13
2617 7369 7.126061 TCCTTTTTCCTTCTTCTTTCTTTCCT 58.874 34.615 0.00 0.00 0.00 3.36
2618 7370 7.619698 TCCTTTTTCCTTCTTCTTTCTTTCCTT 59.380 33.333 0.00 0.00 0.00 3.36
2619 7371 7.708322 CCTTTTTCCTTCTTCTTTCTTTCCTTG 59.292 37.037 0.00 0.00 0.00 3.61
2620 7372 5.774498 TTCCTTCTTCTTTCTTTCCTTGC 57.226 39.130 0.00 0.00 0.00 4.01
2621 7373 4.792068 TCCTTCTTCTTTCTTTCCTTGCA 58.208 39.130 0.00 0.00 0.00 4.08
2622 7374 5.200483 TCCTTCTTCTTTCTTTCCTTGCAA 58.800 37.500 0.00 0.00 0.00 4.08
2623 7375 5.300286 TCCTTCTTCTTTCTTTCCTTGCAAG 59.700 40.000 19.93 19.93 0.00 4.01
2624 7376 5.300286 CCTTCTTCTTTCTTTCCTTGCAAGA 59.700 40.000 28.05 11.04 0.00 3.02
2625 7377 5.757850 TCTTCTTTCTTTCCTTGCAAGAC 57.242 39.130 28.05 0.00 29.70 3.01
2626 7378 5.192927 TCTTCTTTCTTTCCTTGCAAGACA 58.807 37.500 28.05 10.94 29.70 3.41
2627 7379 5.297776 TCTTCTTTCTTTCCTTGCAAGACAG 59.702 40.000 28.05 18.34 31.76 3.51
2628 7380 4.780815 TCTTTCTTTCCTTGCAAGACAGA 58.219 39.130 28.05 20.17 35.60 3.41
2629 7381 4.818546 TCTTTCTTTCCTTGCAAGACAGAG 59.181 41.667 28.05 16.74 33.88 3.35
2630 7382 3.845781 TCTTTCCTTGCAAGACAGAGT 57.154 42.857 28.05 0.00 0.00 3.24
2631 7383 3.470709 TCTTTCCTTGCAAGACAGAGTG 58.529 45.455 28.05 9.08 0.00 3.51
2632 7384 3.118261 TCTTTCCTTGCAAGACAGAGTGT 60.118 43.478 28.05 0.00 0.00 3.55
2633 7385 4.100963 TCTTTCCTTGCAAGACAGAGTGTA 59.899 41.667 28.05 0.00 0.00 2.90
2634 7386 3.386768 TCCTTGCAAGACAGAGTGTAC 57.613 47.619 28.05 0.00 0.00 2.90
2635 7387 2.037251 TCCTTGCAAGACAGAGTGTACC 59.963 50.000 28.05 0.00 0.00 3.34
2636 7388 2.417719 CTTGCAAGACAGAGTGTACCC 58.582 52.381 22.31 0.00 0.00 3.69
2637 7389 1.717032 TGCAAGACAGAGTGTACCCT 58.283 50.000 0.00 0.00 0.00 4.34
2638 7390 1.344438 TGCAAGACAGAGTGTACCCTG 59.656 52.381 5.73 5.73 36.53 4.45
2639 7391 1.344763 GCAAGACAGAGTGTACCCTGT 59.655 52.381 11.03 11.03 45.37 4.00
2640 7392 2.561419 GCAAGACAGAGTGTACCCTGTA 59.439 50.000 11.15 0.00 43.02 2.74
2641 7393 3.006537 GCAAGACAGAGTGTACCCTGTAA 59.993 47.826 11.15 0.00 43.02 2.41
2642 7394 4.557205 CAAGACAGAGTGTACCCTGTAAC 58.443 47.826 11.15 3.08 43.02 2.50
2643 7395 4.115398 AGACAGAGTGTACCCTGTAACT 57.885 45.455 11.15 0.00 43.02 2.24
2644 7396 3.827302 AGACAGAGTGTACCCTGTAACTG 59.173 47.826 11.15 0.00 43.02 3.16
2645 7397 3.825014 GACAGAGTGTACCCTGTAACTGA 59.175 47.826 11.15 0.00 43.02 3.41
2646 7398 4.220724 ACAGAGTGTACCCTGTAACTGAA 58.779 43.478 9.90 0.00 41.38 3.02
2647 7399 4.838986 ACAGAGTGTACCCTGTAACTGAAT 59.161 41.667 9.90 0.00 41.38 2.57
2648 7400 5.047235 ACAGAGTGTACCCTGTAACTGAATC 60.047 44.000 9.90 0.00 41.38 2.52
2649 7401 5.047306 CAGAGTGTACCCTGTAACTGAATCA 60.047 44.000 0.00 0.00 0.00 2.57
2650 7402 5.186021 AGAGTGTACCCTGTAACTGAATCAG 59.814 44.000 8.98 8.98 37.52 2.90
2652 7404 4.929808 GTGTACCCTGTAACTGAATCAGTG 59.070 45.833 17.46 5.66 44.62 3.66
2653 7405 3.059352 ACCCTGTAACTGAATCAGTGC 57.941 47.619 17.46 13.10 44.62 4.40
2654 7406 2.371841 ACCCTGTAACTGAATCAGTGCA 59.628 45.455 17.46 16.69 44.62 4.57
2655 7407 3.009473 ACCCTGTAACTGAATCAGTGCAT 59.991 43.478 17.46 3.92 44.62 3.96
2656 7408 3.376234 CCCTGTAACTGAATCAGTGCATG 59.624 47.826 17.46 14.44 44.62 4.06
2657 7409 4.256110 CCTGTAACTGAATCAGTGCATGA 58.744 43.478 17.46 0.00 44.62 3.07
2658 7410 4.331992 CCTGTAACTGAATCAGTGCATGAG 59.668 45.833 17.46 8.56 44.62 2.90
2659 7411 5.151297 TGTAACTGAATCAGTGCATGAGA 57.849 39.130 17.46 0.00 44.62 3.27
2660 7412 5.550290 TGTAACTGAATCAGTGCATGAGAA 58.450 37.500 17.46 0.00 44.62 2.87
2661 7413 5.997129 TGTAACTGAATCAGTGCATGAGAAA 59.003 36.000 17.46 0.00 44.62 2.52
2662 7414 6.656270 TGTAACTGAATCAGTGCATGAGAAAT 59.344 34.615 17.46 0.00 44.62 2.17
2663 7415 7.823799 TGTAACTGAATCAGTGCATGAGAAATA 59.176 33.333 17.46 0.00 44.62 1.40
2664 7416 6.674694 ACTGAATCAGTGCATGAGAAATAC 57.325 37.500 15.96 0.00 43.63 1.89
2665 7417 6.413052 ACTGAATCAGTGCATGAGAAATACT 58.587 36.000 15.96 0.00 43.63 2.12
2666 7418 7.559486 ACTGAATCAGTGCATGAGAAATACTA 58.441 34.615 15.96 0.00 43.63 1.82
2667 7419 7.493971 ACTGAATCAGTGCATGAGAAATACTAC 59.506 37.037 15.96 0.00 43.63 2.73
2668 7420 7.330262 TGAATCAGTGCATGAGAAATACTACA 58.670 34.615 0.00 0.00 42.53 2.74
2669 7421 7.989170 TGAATCAGTGCATGAGAAATACTACAT 59.011 33.333 0.00 0.00 42.53 2.29
2670 7422 7.959689 ATCAGTGCATGAGAAATACTACATC 57.040 36.000 0.00 0.00 42.53 3.06
2671 7423 5.979517 TCAGTGCATGAGAAATACTACATCG 59.020 40.000 0.00 0.00 32.77 3.84
2672 7424 5.979517 CAGTGCATGAGAAATACTACATCGA 59.020 40.000 0.00 0.00 0.00 3.59
2673 7425 6.143598 CAGTGCATGAGAAATACTACATCGAG 59.856 42.308 0.00 0.00 0.00 4.04
2674 7426 6.039829 AGTGCATGAGAAATACTACATCGAGA 59.960 38.462 0.00 0.00 0.00 4.04
2675 7427 6.865726 GTGCATGAGAAATACTACATCGAGAT 59.134 38.462 0.00 0.00 0.00 2.75
2676 7428 7.061673 GTGCATGAGAAATACTACATCGAGATC 59.938 40.741 0.00 0.00 0.00 2.75
2677 7429 7.040132 TGCATGAGAAATACTACATCGAGATCT 60.040 37.037 0.00 0.00 0.00 2.75
2678 7430 7.273164 GCATGAGAAATACTACATCGAGATCTG 59.727 40.741 0.00 0.00 0.00 2.90
2679 7431 7.809546 TGAGAAATACTACATCGAGATCTGT 57.190 36.000 0.00 0.00 0.00 3.41
2680 7432 8.226819 TGAGAAATACTACATCGAGATCTGTT 57.773 34.615 0.00 0.00 0.00 3.16
2681 7433 8.131731 TGAGAAATACTACATCGAGATCTGTTG 58.868 37.037 0.00 1.08 0.00 3.33
2682 7434 6.920758 AGAAATACTACATCGAGATCTGTTGC 59.079 38.462 0.00 0.00 0.00 4.17
2683 7435 3.444703 ACTACATCGAGATCTGTTGCC 57.555 47.619 0.00 0.00 0.00 4.52
2684 7436 3.027412 ACTACATCGAGATCTGTTGCCT 58.973 45.455 0.00 0.00 0.00 4.75
2685 7437 4.207955 ACTACATCGAGATCTGTTGCCTA 58.792 43.478 0.00 0.00 0.00 3.93
2686 7438 4.645136 ACTACATCGAGATCTGTTGCCTAA 59.355 41.667 0.00 0.00 0.00 2.69
2687 7439 3.786635 ACATCGAGATCTGTTGCCTAAC 58.213 45.455 0.00 0.00 37.32 2.34
2688 7440 3.195610 ACATCGAGATCTGTTGCCTAACA 59.804 43.478 0.00 0.00 44.17 2.41
2689 7441 4.141846 ACATCGAGATCTGTTGCCTAACAT 60.142 41.667 0.00 0.00 45.16 2.71
2690 7442 4.471904 TCGAGATCTGTTGCCTAACATT 57.528 40.909 0.00 0.00 45.16 2.71
2691 7443 4.183865 TCGAGATCTGTTGCCTAACATTG 58.816 43.478 0.00 0.00 45.16 2.82
2692 7444 3.935203 CGAGATCTGTTGCCTAACATTGT 59.065 43.478 0.00 0.00 45.16 2.71
2693 7445 4.201753 CGAGATCTGTTGCCTAACATTGTG 60.202 45.833 0.00 0.00 45.16 3.33
2694 7446 4.012374 AGATCTGTTGCCTAACATTGTGG 58.988 43.478 0.00 0.00 45.16 4.17
2695 7447 3.222173 TCTGTTGCCTAACATTGTGGT 57.778 42.857 0.00 0.00 45.16 4.16
2696 7448 4.359434 TCTGTTGCCTAACATTGTGGTA 57.641 40.909 0.00 0.00 45.16 3.25
2697 7449 4.917385 TCTGTTGCCTAACATTGTGGTAT 58.083 39.130 0.00 0.00 45.16 2.73
2698 7450 4.941263 TCTGTTGCCTAACATTGTGGTATC 59.059 41.667 0.00 0.00 45.16 2.24
2699 7451 4.657013 TGTTGCCTAACATTGTGGTATCA 58.343 39.130 0.00 0.00 41.66 2.15
2700 7452 4.699735 TGTTGCCTAACATTGTGGTATCAG 59.300 41.667 0.00 0.00 41.66 2.90
2701 7453 3.278574 TGCCTAACATTGTGGTATCAGC 58.721 45.455 0.00 0.00 0.00 4.26
2702 7454 3.054434 TGCCTAACATTGTGGTATCAGCT 60.054 43.478 0.00 0.00 0.00 4.24
2703 7455 4.163268 TGCCTAACATTGTGGTATCAGCTA 59.837 41.667 0.00 0.00 0.00 3.32
2704 7456 4.752101 GCCTAACATTGTGGTATCAGCTAG 59.248 45.833 0.00 0.00 0.00 3.42
2705 7457 4.752101 CCTAACATTGTGGTATCAGCTAGC 59.248 45.833 6.62 6.62 0.00 3.42
2706 7458 3.199880 ACATTGTGGTATCAGCTAGCC 57.800 47.619 12.13 0.00 0.00 3.93
2707 7459 2.505407 ACATTGTGGTATCAGCTAGCCA 59.495 45.455 12.13 0.00 0.00 4.75
2709 7461 3.688553 GTGGTATCAGCTAGCCACC 57.311 57.895 12.13 14.01 43.96 4.61
2710 7462 1.123928 GTGGTATCAGCTAGCCACCT 58.876 55.000 12.13 0.00 43.96 4.00
2711 7463 2.317040 GTGGTATCAGCTAGCCACCTA 58.683 52.381 12.13 2.90 43.96 3.08
2712 7464 2.036089 GTGGTATCAGCTAGCCACCTAC 59.964 54.545 12.13 8.29 43.96 3.18
2713 7465 1.619332 GGTATCAGCTAGCCACCTACC 59.381 57.143 12.13 13.41 0.00 3.18
2714 7466 2.317040 GTATCAGCTAGCCACCTACCA 58.683 52.381 12.13 0.00 0.00 3.25
2715 7467 1.123928 ATCAGCTAGCCACCTACCAC 58.876 55.000 12.13 0.00 0.00 4.16
2716 7468 0.976073 TCAGCTAGCCACCTACCACC 60.976 60.000 12.13 0.00 0.00 4.61
2717 7469 1.689582 AGCTAGCCACCTACCACCC 60.690 63.158 12.13 0.00 0.00 4.61
2718 7470 1.689582 GCTAGCCACCTACCACCCT 60.690 63.158 2.29 0.00 0.00 4.34
2719 7471 1.272554 GCTAGCCACCTACCACCCTT 61.273 60.000 2.29 0.00 0.00 3.95
2720 7472 0.831307 CTAGCCACCTACCACCCTTC 59.169 60.000 0.00 0.00 0.00 3.46
2721 7473 0.619543 TAGCCACCTACCACCCTTCC 60.620 60.000 0.00 0.00 0.00 3.46
2722 7474 1.923909 GCCACCTACCACCCTTCCT 60.924 63.158 0.00 0.00 0.00 3.36
2723 7475 1.498176 GCCACCTACCACCCTTCCTT 61.498 60.000 0.00 0.00 0.00 3.36
2724 7476 1.073098 CCACCTACCACCCTTCCTTT 58.927 55.000 0.00 0.00 0.00 3.11
2725 7477 1.271926 CCACCTACCACCCTTCCTTTG 60.272 57.143 0.00 0.00 0.00 2.77
2726 7478 0.404426 ACCTACCACCCTTCCTTTGC 59.596 55.000 0.00 0.00 0.00 3.68
2727 7479 0.323451 CCTACCACCCTTCCTTTGCC 60.323 60.000 0.00 0.00 0.00 4.52
2728 7480 0.676782 CTACCACCCTTCCTTTGCCG 60.677 60.000 0.00 0.00 0.00 5.69
2729 7481 2.757980 TACCACCCTTCCTTTGCCGC 62.758 60.000 0.00 0.00 0.00 6.53
2730 7482 3.373565 CACCCTTCCTTTGCCGCC 61.374 66.667 0.00 0.00 0.00 6.13
2731 7483 3.897122 ACCCTTCCTTTGCCGCCA 61.897 61.111 0.00 0.00 0.00 5.69
2732 7484 2.362889 CCCTTCCTTTGCCGCCAT 60.363 61.111 0.00 0.00 0.00 4.40
2733 7485 2.418083 CCCTTCCTTTGCCGCCATC 61.418 63.158 0.00 0.00 0.00 3.51
2734 7486 2.764314 CCTTCCTTTGCCGCCATCG 61.764 63.158 0.00 0.00 0.00 3.84
2735 7487 3.401243 CTTCCTTTGCCGCCATCGC 62.401 63.158 0.00 0.00 0.00 4.58
2758 7510 4.796231 CTACCAGTTCGCCGCGCT 62.796 66.667 8.21 0.00 0.00 5.92
2763 7515 4.980805 AGTTCGCCGCGCTGGAAA 62.981 61.111 20.06 11.11 42.00 3.13
2764 7516 4.736631 GTTCGCCGCGCTGGAAAC 62.737 66.667 20.06 17.30 42.00 2.78
2765 7517 4.980805 TTCGCCGCGCTGGAAACT 62.981 61.111 20.06 0.00 42.00 2.66
2774 7526 3.121030 CTGGAAACTCGCCGCCAG 61.121 66.667 0.00 0.00 41.62 4.85
2775 7527 3.621805 TGGAAACTCGCCGCCAGA 61.622 61.111 0.00 0.00 0.00 3.86
2776 7528 2.358247 GGAAACTCGCCGCCAGAA 60.358 61.111 0.00 0.00 0.00 3.02
2777 7529 2.391389 GGAAACTCGCCGCCAGAAG 61.391 63.158 0.00 0.00 0.00 2.85
2778 7530 3.028366 GAAACTCGCCGCCAGAAGC 62.028 63.158 0.00 0.00 38.52 3.86
2779 7531 3.825160 AAACTCGCCGCCAGAAGCA 62.825 57.895 0.00 0.00 44.04 3.91
2780 7532 3.825160 AACTCGCCGCCAGAAGCAA 62.825 57.895 0.00 0.00 44.04 3.91
2781 7533 3.494336 CTCGCCGCCAGAAGCAAG 61.494 66.667 0.00 0.00 44.04 4.01
2782 7534 4.314440 TCGCCGCCAGAAGCAAGT 62.314 61.111 0.00 0.00 44.04 3.16
2783 7535 4.093952 CGCCGCCAGAAGCAAGTG 62.094 66.667 0.00 0.00 44.04 3.16
2784 7536 4.410743 GCCGCCAGAAGCAAGTGC 62.411 66.667 0.00 0.00 44.04 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.192534 CTTCTTGGTCGCGTCTTCAAC 59.807 52.381 5.77 0.00 0.00 3.18
16 17 1.004440 AGCACTCCTTCTTGGTCGC 60.004 57.895 0.00 0.00 37.07 5.19
22 23 1.004440 GACGCCAGCACTCCTTCTT 60.004 57.895 0.00 0.00 0.00 2.52
23 24 1.758440 TTGACGCCAGCACTCCTTCT 61.758 55.000 0.00 0.00 0.00 2.85
24 25 1.294659 CTTGACGCCAGCACTCCTTC 61.295 60.000 0.00 0.00 0.00 3.46
25 26 1.302033 CTTGACGCCAGCACTCCTT 60.302 57.895 0.00 0.00 0.00 3.36
45 46 0.528901 TTGTCGTCAACTGGTCCGTG 60.529 55.000 0.00 0.00 0.00 4.94
55 56 1.928503 GACCGTCTTTGTTGTCGTCAA 59.071 47.619 0.00 0.00 0.00 3.18
56 57 1.563111 GACCGTCTTTGTTGTCGTCA 58.437 50.000 0.00 0.00 0.00 4.35
64 65 2.817844 GCATTTTAGGGACCGTCTTTGT 59.182 45.455 0.00 0.00 0.00 2.83
65 66 3.081804 AGCATTTTAGGGACCGTCTTTG 58.918 45.455 0.00 0.00 0.00 2.77
87 88 3.303924 GCATTGCTTTTGCCATTTTTCGT 60.304 39.130 0.16 0.00 46.87 3.85
99 100 6.704310 AGTCATAATCTTTGGCATTGCTTTT 58.296 32.000 8.82 0.00 0.00 2.27
102 103 6.774170 TCATAGTCATAATCTTTGGCATTGCT 59.226 34.615 8.82 0.00 0.00 3.91
117 118 9.668497 ATGCGACTACTACTATTCATAGTCATA 57.332 33.333 2.62 0.00 42.38 2.15
119 120 7.981102 ATGCGACTACTACTATTCATAGTCA 57.019 36.000 2.62 0.00 42.38 3.41
120 121 9.119329 CAAATGCGACTACTACTATTCATAGTC 57.881 37.037 2.62 0.00 42.31 2.59
121 122 8.082852 CCAAATGCGACTACTACTATTCATAGT 58.917 37.037 4.87 4.87 45.08 2.12
125 126 5.361571 TCCCAAATGCGACTACTACTATTCA 59.638 40.000 0.00 0.00 0.00 2.57
128 129 5.047235 GGATCCCAAATGCGACTACTACTAT 60.047 44.000 0.00 0.00 0.00 2.12
132 133 3.035363 TGGATCCCAAATGCGACTACTA 58.965 45.455 9.90 0.00 0.00 1.82
134 135 2.213499 CTGGATCCCAAATGCGACTAC 58.787 52.381 9.90 0.00 30.80 2.73
135 136 1.140852 CCTGGATCCCAAATGCGACTA 59.859 52.381 9.90 0.00 30.80 2.59
137 138 0.394352 ACCTGGATCCCAAATGCGAC 60.394 55.000 9.90 0.00 30.80 5.19
140 141 1.851304 TTGACCTGGATCCCAAATGC 58.149 50.000 9.90 0.00 30.80 3.56
142 143 2.825532 CGTTTTGACCTGGATCCCAAAT 59.174 45.455 9.90 0.00 30.80 2.32
150 151 1.697432 ACATCCTCGTTTTGACCTGGA 59.303 47.619 0.00 0.00 0.00 3.86
158 159 4.003648 CCTAAGCTTGACATCCTCGTTTT 58.996 43.478 9.86 0.00 0.00 2.43
168 169 2.024176 TCACCCTCCTAAGCTTGACA 57.976 50.000 9.86 0.00 0.00 3.58
173 174 3.456277 CCTTACATTCACCCTCCTAAGCT 59.544 47.826 0.00 0.00 0.00 3.74
181 182 5.450818 TGCTTATTCCTTACATTCACCCT 57.549 39.130 0.00 0.00 0.00 4.34
190 192 4.034048 CACGGTGTCATGCTTATTCCTTAC 59.966 45.833 0.00 0.00 0.00 2.34
192 194 3.009723 CACGGTGTCATGCTTATTCCTT 58.990 45.455 0.00 0.00 0.00 3.36
230 244 2.688958 GGAGTTCTAGCACTACACGGAT 59.311 50.000 0.00 0.00 0.00 4.18
251 265 3.502979 CCTTAGCTAACCTAGTCGGCTAG 59.497 52.174 17.33 17.33 43.26 3.42
252 266 3.117738 ACCTTAGCTAACCTAGTCGGCTA 60.118 47.826 0.86 0.00 35.61 3.93
254 268 2.030371 ACCTTAGCTAACCTAGTCGGC 58.970 52.381 0.86 0.00 35.61 5.54
268 282 8.810990 ATATACTACTAAGCCAGCTACCTTAG 57.189 38.462 21.84 21.84 43.76 2.18
297 312 6.054295 ACAAAAATTACAGGGTGTACGTGTA 58.946 36.000 0.00 0.00 45.62 2.90
299 314 5.427036 ACAAAAATTACAGGGTGTACGTG 57.573 39.130 0.00 0.00 40.69 4.49
306 321 7.364970 GTTCGTTGATACAAAAATTACAGGGT 58.635 34.615 0.00 0.00 0.00 4.34
311 326 9.274065 GATCTGGTTCGTTGATACAAAAATTAC 57.726 33.333 0.00 0.00 0.00 1.89
312 327 9.004717 TGATCTGGTTCGTTGATACAAAAATTA 57.995 29.630 0.00 0.00 0.00 1.40
313 328 7.881142 TGATCTGGTTCGTTGATACAAAAATT 58.119 30.769 0.00 0.00 0.00 1.82
315 330 6.869315 TGATCTGGTTCGTTGATACAAAAA 57.131 33.333 0.00 0.00 0.00 1.94
317 332 7.604545 TGTATTGATCTGGTTCGTTGATACAAA 59.395 33.333 0.00 0.00 0.00 2.83
320 335 7.491372 TCTTGTATTGATCTGGTTCGTTGATAC 59.509 37.037 0.00 0.00 0.00 2.24
321 336 7.552459 TCTTGTATTGATCTGGTTCGTTGATA 58.448 34.615 0.00 0.00 0.00 2.15
323 338 5.789521 TCTTGTATTGATCTGGTTCGTTGA 58.210 37.500 0.00 0.00 0.00 3.18
373 4550 2.710096 TTTGGTGATAGCTACAGGGC 57.290 50.000 0.00 0.00 0.00 5.19
447 4624 4.082190 TCGGTTGATCTCTCGATGAACTTT 60.082 41.667 5.02 0.00 41.60 2.66
583 4773 3.426292 GGCTTTTGATCGCTAGACCAAAC 60.426 47.826 0.00 0.00 0.00 2.93
622 4812 3.602205 ACCTCTTCTTTCCTTTTGGCT 57.398 42.857 0.00 0.00 40.12 4.75
756 4946 8.833493 TCATCACTATGCTTGACAGATTAATTG 58.167 33.333 0.00 0.00 32.76 2.32
907 5099 9.992442 ACAGCTAGGGTGTGTATATATATAACT 57.008 33.333 3.96 0.55 42.86 2.24
937 5149 3.430895 CACTAACGGACTAAAATGCGTGT 59.569 43.478 0.00 0.00 46.68 4.49
1084 5312 1.874345 CGTACCTCGGAGTTGGTGCT 61.874 60.000 4.02 0.00 36.33 4.40
1092 5320 3.577649 ATTATCATGCGTACCTCGGAG 57.422 47.619 0.00 0.00 44.02 4.63
1096 5324 6.593978 CAAAGCTAATTATCATGCGTACCTC 58.406 40.000 0.00 0.00 0.00 3.85
1132 5365 0.871722 TGGCATTTGTCGTACTGCAC 59.128 50.000 5.08 0.00 36.34 4.57
1140 5373 0.096976 GTGATCCGTGGCATTTGTCG 59.903 55.000 0.00 0.00 0.00 4.35
1145 5378 1.024579 GGTTCGTGATCCGTGGCATT 61.025 55.000 0.00 0.00 37.94 3.56
1146 5379 1.449601 GGTTCGTGATCCGTGGCAT 60.450 57.895 0.00 0.00 37.94 4.40
1151 5384 2.181021 GCTCGGTTCGTGATCCGT 59.819 61.111 16.48 0.00 45.88 4.69
1164 5397 0.242286 AGCACTACTGTGTCAGCTCG 59.758 55.000 0.00 0.00 45.44 5.03
1185 5418 0.602638 TACCCAGCAAACGACTGCAG 60.603 55.000 13.48 13.48 45.18 4.41
1414 5655 7.824289 TGAGAGAGAAAGTTTAGAGAGAGAGAG 59.176 40.741 0.00 0.00 0.00 3.20
1417 5658 7.888021 ACATGAGAGAGAAAGTTTAGAGAGAGA 59.112 37.037 0.00 0.00 0.00 3.10
1420 5661 8.055279 AGACATGAGAGAGAAAGTTTAGAGAG 57.945 38.462 0.00 0.00 0.00 3.20
1427 5670 6.153067 CACGTTAGACATGAGAGAGAAAGTT 58.847 40.000 0.00 0.00 0.00 2.66
1440 5991 5.916883 GTGTTGTACACTACACGTTAGACAT 59.083 40.000 13.54 1.20 45.27 3.06
1501 6057 0.598065 GCCGATGAAAAACAGCACCT 59.402 50.000 0.00 0.00 34.21 4.00
1542 6098 4.760047 TTCAGCCGGCTTCCGCTC 62.760 66.667 30.60 0.00 46.86 5.03
1556 6112 4.680237 CCGGCGCTGGTGTCTTCA 62.680 66.667 27.83 0.00 0.00 3.02
1594 6150 2.203280 TGGCGAACACCCCAGTTG 60.203 61.111 0.00 0.00 0.00 3.16
1819 6375 1.544724 TCTCAAAATTCCAAGGCCGG 58.455 50.000 0.00 0.00 0.00 6.13
1845 6401 4.212425 ACAAATTCTCGTGTGATTTGCGTA 59.788 37.500 19.18 0.00 36.12 4.42
1847 6403 3.554524 ACAAATTCTCGTGTGATTTGCG 58.445 40.909 19.18 0.00 36.12 4.85
1945 6629 7.151976 CCCATAACAGTTTTCCGAAAAGATTT 58.848 34.615 6.54 3.38 0.00 2.17
1955 6639 9.856162 TTCCTATATTACCCATAACAGTTTTCC 57.144 33.333 0.00 0.00 0.00 3.13
1968 6652 8.990163 TTCCACTGAAAATTCCTATATTACCC 57.010 34.615 0.00 0.00 0.00 3.69
2074 6765 8.103935 TGACACCAATAGACACCAAATATGTTA 58.896 33.333 0.00 0.00 0.00 2.41
2102 6793 9.252962 CCTCCGTCTTATAATGTAATACGTTTT 57.747 33.333 2.96 0.00 0.00 2.43
2103 6794 7.869429 CCCTCCGTCTTATAATGTAATACGTTT 59.131 37.037 2.96 0.00 0.00 3.60
2104 6795 7.231317 TCCCTCCGTCTTATAATGTAATACGTT 59.769 37.037 0.00 3.19 0.00 3.99
2105 6796 6.716628 TCCCTCCGTCTTATAATGTAATACGT 59.283 38.462 6.85 0.00 0.00 3.57
2107 6798 8.120140 ACTCCCTCCGTCTTATAATGTAATAC 57.880 38.462 0.00 0.00 0.00 1.89
2108 6799 9.458727 CTACTCCCTCCGTCTTATAATGTAATA 57.541 37.037 0.00 0.00 0.00 0.98
2109 6800 7.949006 ACTACTCCCTCCGTCTTATAATGTAAT 59.051 37.037 0.00 0.00 0.00 1.89
2110 6801 7.293073 ACTACTCCCTCCGTCTTATAATGTAA 58.707 38.462 0.00 0.00 0.00 2.41
2112 6803 5.703310 ACTACTCCCTCCGTCTTATAATGT 58.297 41.667 0.00 0.00 0.00 2.71
2113 6804 6.040616 ACAACTACTCCCTCCGTCTTATAATG 59.959 42.308 0.00 0.00 0.00 1.90
2117 6869 3.978610 ACAACTACTCCCTCCGTCTTAT 58.021 45.455 0.00 0.00 0.00 1.73
2149 6901 1.583556 TGCTTGCCCTTCTCATAGGA 58.416 50.000 0.00 0.00 37.50 2.94
2176 6928 4.109766 GTCTGTGCGGCGCATATATATAA 58.890 43.478 38.43 14.39 41.91 0.98
2182 6934 0.744414 AAAGTCTGTGCGGCGCATAT 60.744 50.000 38.43 17.92 41.91 1.78
2183 6935 0.953471 AAAAGTCTGTGCGGCGCATA 60.953 50.000 38.43 33.37 41.91 3.14
2184 6936 1.795170 AAAAAGTCTGTGCGGCGCAT 61.795 50.000 38.43 19.35 41.91 4.73
2185 6937 2.477176 AAAAAGTCTGTGCGGCGCA 61.477 52.632 33.07 33.07 35.60 6.09
2186 6938 2.010817 CAAAAAGTCTGTGCGGCGC 61.011 57.895 27.44 27.44 0.00 6.53
2187 6939 0.248458 AACAAAAAGTCTGTGCGGCG 60.248 50.000 0.51 0.51 0.00 6.46
2201 6953 1.483827 TGGTGCTTGCCAATGAACAAA 59.516 42.857 0.00 0.00 35.25 2.83
2328 7080 5.348259 TGGGTCCCTGACACTATATATCA 57.652 43.478 10.00 0.00 36.82 2.15
2339 7091 1.652947 TCTAAGGTTGGGTCCCTGAC 58.347 55.000 10.00 7.92 30.99 3.51
2340 7092 2.196595 CATCTAAGGTTGGGTCCCTGA 58.803 52.381 10.00 0.00 30.99 3.86
2341 7093 1.408822 GCATCTAAGGTTGGGTCCCTG 60.409 57.143 10.00 0.00 30.99 4.45
2342 7094 0.919710 GCATCTAAGGTTGGGTCCCT 59.080 55.000 10.00 0.00 0.00 4.20
2343 7095 0.463833 CGCATCTAAGGTTGGGTCCC 60.464 60.000 0.00 0.00 0.00 4.46
2344 7096 0.252197 ACGCATCTAAGGTTGGGTCC 59.748 55.000 0.00 0.00 34.64 4.46
2345 7097 1.653151 GACGCATCTAAGGTTGGGTC 58.347 55.000 4.69 4.69 43.01 4.46
2346 7098 0.252197 GGACGCATCTAAGGTTGGGT 59.748 55.000 0.00 0.00 39.77 4.51
2347 7099 0.463833 GGGACGCATCTAAGGTTGGG 60.464 60.000 0.00 0.00 0.00 4.12
2348 7100 0.463833 GGGGACGCATCTAAGGTTGG 60.464 60.000 0.00 0.00 0.00 3.77
2349 7101 0.251916 TGGGGACGCATCTAAGGTTG 59.748 55.000 0.00 0.00 0.00 3.77
2350 7102 0.541863 CTGGGGACGCATCTAAGGTT 59.458 55.000 0.00 0.00 0.00 3.50
2351 7103 0.617820 ACTGGGGACGCATCTAAGGT 60.618 55.000 0.00 0.00 0.00 3.50
2352 7104 0.105039 GACTGGGGACGCATCTAAGG 59.895 60.000 0.00 0.00 0.00 2.69
2353 7105 0.249073 CGACTGGGGACGCATCTAAG 60.249 60.000 0.00 0.00 0.00 2.18
2354 7106 0.681887 TCGACTGGGGACGCATCTAA 60.682 55.000 0.00 0.00 0.00 2.10
2355 7107 1.077285 TCGACTGGGGACGCATCTA 60.077 57.895 0.00 0.00 0.00 1.98
2356 7108 2.362503 TCGACTGGGGACGCATCT 60.363 61.111 0.00 0.00 0.00 2.90
2357 7109 2.202756 GTCGACTGGGGACGCATC 60.203 66.667 8.70 0.00 0.00 3.91
2358 7110 2.994995 TGTCGACTGGGGACGCAT 60.995 61.111 17.92 0.00 37.22 4.73
2359 7111 3.680786 CTGTCGACTGGGGACGCA 61.681 66.667 17.92 0.00 37.22 5.24
2360 7112 2.227089 ATTCTGTCGACTGGGGACGC 62.227 60.000 20.57 0.00 37.22 5.19
2361 7113 0.179134 GATTCTGTCGACTGGGGACG 60.179 60.000 20.57 0.00 37.22 4.79
2362 7114 0.895530 TGATTCTGTCGACTGGGGAC 59.104 55.000 20.57 11.18 34.99 4.46
2363 7115 1.482182 CATGATTCTGTCGACTGGGGA 59.518 52.381 20.57 9.27 0.00 4.81
2364 7116 1.473965 CCATGATTCTGTCGACTGGGG 60.474 57.143 20.57 10.05 0.00 4.96
2365 7117 1.945387 CCATGATTCTGTCGACTGGG 58.055 55.000 20.57 10.04 0.00 4.45
2366 7118 1.293924 GCCATGATTCTGTCGACTGG 58.706 55.000 20.57 16.22 0.00 4.00
2367 7119 1.293924 GGCCATGATTCTGTCGACTG 58.706 55.000 17.92 16.72 0.00 3.51
2368 7120 0.904649 TGGCCATGATTCTGTCGACT 59.095 50.000 17.92 0.00 0.00 4.18
2369 7121 1.667724 CTTGGCCATGATTCTGTCGAC 59.332 52.381 13.33 9.11 0.00 4.20
2370 7122 1.278985 ACTTGGCCATGATTCTGTCGA 59.721 47.619 24.48 0.00 0.00 4.20
2371 7123 1.667724 GACTTGGCCATGATTCTGTCG 59.332 52.381 24.48 0.00 0.00 4.35
2372 7124 2.681848 CTGACTTGGCCATGATTCTGTC 59.318 50.000 24.48 14.72 0.00 3.51
2373 7125 2.040813 ACTGACTTGGCCATGATTCTGT 59.959 45.455 24.48 17.60 0.00 3.41
2374 7126 2.422479 CACTGACTTGGCCATGATTCTG 59.578 50.000 24.48 17.03 0.00 3.02
2375 7127 2.306805 TCACTGACTTGGCCATGATTCT 59.693 45.455 24.48 2.28 0.00 2.40
2376 7128 2.681848 CTCACTGACTTGGCCATGATTC 59.318 50.000 24.48 13.04 0.00 2.52
2377 7129 2.306805 TCTCACTGACTTGGCCATGATT 59.693 45.455 24.48 3.44 0.00 2.57
2378 7130 1.911357 TCTCACTGACTTGGCCATGAT 59.089 47.619 24.48 9.25 0.00 2.45
2379 7131 1.277273 CTCTCACTGACTTGGCCATGA 59.723 52.381 24.48 14.39 0.00 3.07
2380 7132 1.678123 CCTCTCACTGACTTGGCCATG 60.678 57.143 16.76 16.76 0.00 3.66
2381 7133 0.617413 CCTCTCACTGACTTGGCCAT 59.383 55.000 6.09 0.00 0.00 4.40
2382 7134 1.483595 CCCTCTCACTGACTTGGCCA 61.484 60.000 0.00 0.00 0.00 5.36
2383 7135 1.298014 CCCTCTCACTGACTTGGCC 59.702 63.158 0.00 0.00 0.00 5.36
2384 7136 1.194781 TCCCCTCTCACTGACTTGGC 61.195 60.000 0.00 0.00 0.00 4.52
2385 7137 0.610687 GTCCCCTCTCACTGACTTGG 59.389 60.000 0.00 0.00 0.00 3.61
2386 7138 1.274728 CTGTCCCCTCTCACTGACTTG 59.725 57.143 0.00 0.00 0.00 3.16
2397 7149 4.767255 CTGCCACGCTGTCCCCTC 62.767 72.222 0.00 0.00 0.00 4.30
2405 7157 4.749310 CTCTTCCGCTGCCACGCT 62.749 66.667 0.00 0.00 0.00 5.07
2408 7160 3.426568 GTGCTCTTCCGCTGCCAC 61.427 66.667 0.00 0.00 0.00 5.01
2409 7161 4.704833 GGTGCTCTTCCGCTGCCA 62.705 66.667 0.00 0.00 0.00 4.92
2410 7162 3.909086 AAGGTGCTCTTCCGCTGCC 62.909 63.158 0.00 0.00 0.00 4.85
2411 7163 1.916697 GAAAGGTGCTCTTCCGCTGC 61.917 60.000 0.00 0.00 33.94 5.25
2412 7164 1.301677 GGAAAGGTGCTCTTCCGCTG 61.302 60.000 0.00 0.00 33.94 5.18
2413 7165 1.003233 GGAAAGGTGCTCTTCCGCT 60.003 57.895 0.00 0.00 33.94 5.52
2414 7166 1.302511 TGGAAAGGTGCTCTTCCGC 60.303 57.895 3.27 0.00 33.94 5.54
2415 7167 0.955919 GGTGGAAAGGTGCTCTTCCG 60.956 60.000 3.27 0.00 33.94 4.30
2416 7168 0.110486 TGGTGGAAAGGTGCTCTTCC 59.890 55.000 0.97 0.97 33.94 3.46
2417 7169 1.202818 ACTGGTGGAAAGGTGCTCTTC 60.203 52.381 0.00 0.00 33.94 2.87
2418 7170 0.846693 ACTGGTGGAAAGGTGCTCTT 59.153 50.000 0.00 0.00 37.28 2.85
2419 7171 0.398318 GACTGGTGGAAAGGTGCTCT 59.602 55.000 0.00 0.00 0.00 4.09
2420 7172 0.108585 TGACTGGTGGAAAGGTGCTC 59.891 55.000 0.00 0.00 0.00 4.26
2421 7173 0.109342 CTGACTGGTGGAAAGGTGCT 59.891 55.000 0.00 0.00 0.00 4.40
2422 7174 0.890996 CCTGACTGGTGGAAAGGTGC 60.891 60.000 0.00 0.00 0.00 5.01
2423 7175 0.250901 CCCTGACTGGTGGAAAGGTG 60.251 60.000 0.00 0.00 0.00 4.00
2424 7176 1.427072 CCCCTGACTGGTGGAAAGGT 61.427 60.000 0.00 0.00 0.00 3.50
2425 7177 1.380302 CCCCTGACTGGTGGAAAGG 59.620 63.158 0.00 0.00 0.00 3.11
2426 7178 1.303643 GCCCCTGACTGGTGGAAAG 60.304 63.158 9.23 0.00 0.00 2.62
2427 7179 2.067932 CTGCCCCTGACTGGTGGAAA 62.068 60.000 9.23 0.00 0.00 3.13
2428 7180 2.449518 TGCCCCTGACTGGTGGAA 60.450 61.111 9.23 0.00 0.00 3.53
2429 7181 2.930019 CTGCCCCTGACTGGTGGA 60.930 66.667 9.23 0.00 0.00 4.02
2430 7182 4.039092 CCTGCCCCTGACTGGTGG 62.039 72.222 0.00 0.26 0.00 4.61
2431 7183 4.039092 CCCTGCCCCTGACTGGTG 62.039 72.222 0.00 0.00 0.00 4.17
2444 7196 4.899239 GGAGATGACGCGCCCCTG 62.899 72.222 5.73 0.00 0.00 4.45
2446 7198 4.467084 TTGGAGATGACGCGCCCC 62.467 66.667 5.73 0.00 0.00 5.80
2447 7199 2.892425 CTTGGAGATGACGCGCCC 60.892 66.667 5.73 0.00 0.00 6.13
2448 7200 3.567797 GCTTGGAGATGACGCGCC 61.568 66.667 5.73 0.00 0.00 6.53
2449 7201 3.567797 GGCTTGGAGATGACGCGC 61.568 66.667 5.73 0.00 0.00 6.86
2450 7202 2.125552 TGGCTTGGAGATGACGCG 60.126 61.111 3.53 3.53 0.00 6.01
2451 7203 2.109126 GGTGGCTTGGAGATGACGC 61.109 63.158 0.00 0.00 0.00 5.19
2452 7204 0.460987 GAGGTGGCTTGGAGATGACG 60.461 60.000 0.00 0.00 0.00 4.35
2453 7205 0.615331 TGAGGTGGCTTGGAGATGAC 59.385 55.000 0.00 0.00 0.00 3.06
2454 7206 0.907486 CTGAGGTGGCTTGGAGATGA 59.093 55.000 0.00 0.00 0.00 2.92
2455 7207 0.907486 TCTGAGGTGGCTTGGAGATG 59.093 55.000 0.00 0.00 0.00 2.90
2456 7208 1.767681 GATCTGAGGTGGCTTGGAGAT 59.232 52.381 0.00 0.00 0.00 2.75
2457 7209 1.198713 GATCTGAGGTGGCTTGGAGA 58.801 55.000 0.00 0.00 0.00 3.71
2458 7210 0.907486 TGATCTGAGGTGGCTTGGAG 59.093 55.000 0.00 0.00 0.00 3.86
2459 7211 1.280133 CTTGATCTGAGGTGGCTTGGA 59.720 52.381 0.00 0.00 0.00 3.53
2460 7212 1.747709 CTTGATCTGAGGTGGCTTGG 58.252 55.000 0.00 0.00 0.00 3.61
2461 7213 1.093159 GCTTGATCTGAGGTGGCTTG 58.907 55.000 0.00 0.00 0.00 4.01
2462 7214 0.694771 TGCTTGATCTGAGGTGGCTT 59.305 50.000 0.00 0.00 0.00 4.35
2463 7215 0.694771 TTGCTTGATCTGAGGTGGCT 59.305 50.000 0.00 0.00 0.00 4.75
2464 7216 0.807496 GTTGCTTGATCTGAGGTGGC 59.193 55.000 0.00 0.00 0.00 5.01
2465 7217 1.457346 GGTTGCTTGATCTGAGGTGG 58.543 55.000 0.00 0.00 0.00 4.61
2466 7218 1.081892 CGGTTGCTTGATCTGAGGTG 58.918 55.000 0.00 0.00 0.00 4.00
2467 7219 0.976641 TCGGTTGCTTGATCTGAGGT 59.023 50.000 0.00 0.00 0.00 3.85
2468 7220 1.734465 GTTCGGTTGCTTGATCTGAGG 59.266 52.381 0.00 0.00 0.00 3.86
2469 7221 1.734465 GGTTCGGTTGCTTGATCTGAG 59.266 52.381 0.00 0.00 0.00 3.35
2470 7222 1.808411 GGTTCGGTTGCTTGATCTGA 58.192 50.000 0.00 0.00 0.00 3.27
2471 7223 0.443869 CGGTTCGGTTGCTTGATCTG 59.556 55.000 0.00 0.00 0.00 2.90
2472 7224 1.298859 GCGGTTCGGTTGCTTGATCT 61.299 55.000 0.00 0.00 0.00 2.75
2473 7225 1.134694 GCGGTTCGGTTGCTTGATC 59.865 57.895 0.00 0.00 0.00 2.92
2474 7226 1.577328 CTGCGGTTCGGTTGCTTGAT 61.577 55.000 0.00 0.00 0.00 2.57
2475 7227 2.203084 TGCGGTTCGGTTGCTTGA 60.203 55.556 0.00 0.00 0.00 3.02
2476 7228 2.252260 CTGCGGTTCGGTTGCTTG 59.748 61.111 0.00 0.00 0.00 4.01
2477 7229 2.978010 CCTGCGGTTCGGTTGCTT 60.978 61.111 0.00 0.00 0.00 3.91
2478 7230 3.767630 AACCTGCGGTTCGGTTGCT 62.768 57.895 7.08 0.00 43.05 3.91
2479 7231 3.284449 AACCTGCGGTTCGGTTGC 61.284 61.111 7.08 0.00 43.05 4.17
2501 7253 4.754667 GTTCGACCACTCCGGGCC 62.755 72.222 0.00 0.00 41.57 5.80
2504 7256 2.693762 TAGCGTTCGACCACTCCGG 61.694 63.158 0.00 0.00 42.50 5.14
2505 7257 1.513586 GTAGCGTTCGACCACTCCG 60.514 63.158 0.00 0.00 0.00 4.63
2506 7258 0.172803 ATGTAGCGTTCGACCACTCC 59.827 55.000 0.00 0.00 0.00 3.85
2507 7259 2.838386 TATGTAGCGTTCGACCACTC 57.162 50.000 0.00 0.00 0.00 3.51
2508 7260 2.734492 GCTTATGTAGCGTTCGACCACT 60.734 50.000 0.00 0.00 40.71 4.00
2509 7261 1.587034 GCTTATGTAGCGTTCGACCAC 59.413 52.381 0.00 0.00 40.71 4.16
2510 7262 1.917273 GCTTATGTAGCGTTCGACCA 58.083 50.000 0.00 0.00 40.71 4.02
2520 7272 3.243704 GCCACTCCTCTCAGCTTATGTAG 60.244 52.174 0.00 0.00 0.00 2.74
2521 7273 2.695666 GCCACTCCTCTCAGCTTATGTA 59.304 50.000 0.00 0.00 0.00 2.29
2522 7274 1.484240 GCCACTCCTCTCAGCTTATGT 59.516 52.381 0.00 0.00 0.00 2.29
2523 7275 1.761784 AGCCACTCCTCTCAGCTTATG 59.238 52.381 0.00 0.00 0.00 1.90
2524 7276 2.173126 AGCCACTCCTCTCAGCTTAT 57.827 50.000 0.00 0.00 0.00 1.73
2525 7277 2.024846 ACTAGCCACTCCTCTCAGCTTA 60.025 50.000 0.00 0.00 35.03 3.09
2526 7278 1.272985 ACTAGCCACTCCTCTCAGCTT 60.273 52.381 0.00 0.00 35.03 3.74
2527 7279 0.334676 ACTAGCCACTCCTCTCAGCT 59.665 55.000 0.00 0.00 37.58 4.24
2528 7280 1.136110 GAACTAGCCACTCCTCTCAGC 59.864 57.143 0.00 0.00 0.00 4.26
2529 7281 1.403679 CGAACTAGCCACTCCTCTCAG 59.596 57.143 0.00 0.00 0.00 3.35
2530 7282 1.004394 TCGAACTAGCCACTCCTCTCA 59.996 52.381 0.00 0.00 0.00 3.27
2531 7283 1.402613 GTCGAACTAGCCACTCCTCTC 59.597 57.143 0.00 0.00 0.00 3.20
2532 7284 1.271982 TGTCGAACTAGCCACTCCTCT 60.272 52.381 0.00 0.00 0.00 3.69
2533 7285 1.174783 TGTCGAACTAGCCACTCCTC 58.825 55.000 0.00 0.00 0.00 3.71
2534 7286 1.751924 GATGTCGAACTAGCCACTCCT 59.248 52.381 0.00 0.00 0.00 3.69
2535 7287 1.751924 AGATGTCGAACTAGCCACTCC 59.248 52.381 0.00 0.00 0.00 3.85
2536 7288 3.628487 ACTAGATGTCGAACTAGCCACTC 59.372 47.826 16.93 0.27 39.47 3.51
2537 7289 3.378742 CACTAGATGTCGAACTAGCCACT 59.621 47.826 16.93 0.00 39.47 4.00
2538 7290 3.489398 CCACTAGATGTCGAACTAGCCAC 60.489 52.174 16.93 0.00 39.47 5.01
2539 7291 2.688446 CCACTAGATGTCGAACTAGCCA 59.312 50.000 16.93 0.00 39.47 4.75
2540 7292 2.034812 CCCACTAGATGTCGAACTAGCC 59.965 54.545 16.93 0.00 39.47 3.93
2541 7293 2.950309 TCCCACTAGATGTCGAACTAGC 59.050 50.000 16.93 0.00 39.47 3.42
2542 7294 4.822350 TGATCCCACTAGATGTCGAACTAG 59.178 45.833 15.99 15.99 41.01 2.57
2543 7295 4.788679 TGATCCCACTAGATGTCGAACTA 58.211 43.478 0.00 0.00 0.00 2.24
2544 7296 3.632333 TGATCCCACTAGATGTCGAACT 58.368 45.455 0.00 0.00 0.00 3.01
2545 7297 3.243569 CCTGATCCCACTAGATGTCGAAC 60.244 52.174 0.00 0.00 0.00 3.95
2546 7298 2.959030 CCTGATCCCACTAGATGTCGAA 59.041 50.000 0.00 0.00 0.00 3.71
2547 7299 2.587522 CCTGATCCCACTAGATGTCGA 58.412 52.381 0.00 0.00 0.00 4.20
2548 7300 1.000283 GCCTGATCCCACTAGATGTCG 60.000 57.143 0.00 0.00 0.00 4.35
2549 7301 2.042464 TGCCTGATCCCACTAGATGTC 58.958 52.381 0.00 0.00 0.00 3.06
2550 7302 2.171448 GTTGCCTGATCCCACTAGATGT 59.829 50.000 0.00 0.00 0.00 3.06
2551 7303 2.804572 CGTTGCCTGATCCCACTAGATG 60.805 54.545 0.00 0.00 0.00 2.90
2552 7304 1.414181 CGTTGCCTGATCCCACTAGAT 59.586 52.381 0.00 0.00 0.00 1.98
2553 7305 0.824109 CGTTGCCTGATCCCACTAGA 59.176 55.000 0.00 0.00 0.00 2.43
2554 7306 0.179073 CCGTTGCCTGATCCCACTAG 60.179 60.000 0.00 0.00 0.00 2.57
2555 7307 1.904771 CCGTTGCCTGATCCCACTA 59.095 57.895 0.00 0.00 0.00 2.74
2556 7308 2.671070 CCGTTGCCTGATCCCACT 59.329 61.111 0.00 0.00 0.00 4.00
2557 7309 3.134127 GCCGTTGCCTGATCCCAC 61.134 66.667 0.00 0.00 0.00 4.61
2558 7310 3.645660 TGCCGTTGCCTGATCCCA 61.646 61.111 0.00 0.00 36.33 4.37
2559 7311 3.134127 GTGCCGTTGCCTGATCCC 61.134 66.667 0.00 0.00 36.33 3.85
2560 7312 3.499737 CGTGCCGTTGCCTGATCC 61.500 66.667 0.00 0.00 36.33 3.36
2561 7313 2.434185 TCGTGCCGTTGCCTGATC 60.434 61.111 0.00 0.00 36.33 2.92
2562 7314 2.742372 GTCGTGCCGTTGCCTGAT 60.742 61.111 0.00 0.00 36.33 2.90
2563 7315 4.228567 TGTCGTGCCGTTGCCTGA 62.229 61.111 0.00 0.00 36.33 3.86
2564 7316 4.012895 GTGTCGTGCCGTTGCCTG 62.013 66.667 0.00 0.00 36.33 4.85
2575 7327 4.903010 AAAGCCGTGCCGTGTCGT 62.903 61.111 0.00 0.00 0.00 4.34
2576 7328 4.072088 GAAAGCCGTGCCGTGTCG 62.072 66.667 0.00 0.00 0.00 4.35
2577 7329 3.723348 GGAAAGCCGTGCCGTGTC 61.723 66.667 0.00 0.00 0.00 3.67
2578 7330 3.767630 AAGGAAAGCCGTGCCGTGT 62.768 57.895 0.00 0.00 39.96 4.49
2579 7331 2.070654 AAAAGGAAAGCCGTGCCGTG 62.071 55.000 0.00 0.00 39.96 4.94
2580 7332 1.388837 AAAAAGGAAAGCCGTGCCGT 61.389 50.000 0.00 0.00 39.96 5.68
2581 7333 0.663269 GAAAAAGGAAAGCCGTGCCG 60.663 55.000 0.00 0.00 39.96 5.69
2582 7334 0.319555 GGAAAAAGGAAAGCCGTGCC 60.320 55.000 0.00 0.00 39.96 5.01
2583 7335 0.673985 AGGAAAAAGGAAAGCCGTGC 59.326 50.000 0.00 0.00 39.96 5.34
2584 7336 2.623416 AGAAGGAAAAAGGAAAGCCGTG 59.377 45.455 0.00 0.00 39.96 4.94
2585 7337 2.945456 AGAAGGAAAAAGGAAAGCCGT 58.055 42.857 0.00 0.00 39.96 5.68
2586 7338 3.570125 AGAAGAAGGAAAAAGGAAAGCCG 59.430 43.478 0.00 0.00 39.96 5.52
2587 7339 5.537300 AAGAAGAAGGAAAAAGGAAAGCC 57.463 39.130 0.00 0.00 0.00 4.35
2588 7340 6.810911 AGAAAGAAGAAGGAAAAAGGAAAGC 58.189 36.000 0.00 0.00 0.00 3.51
2589 7341 9.307121 GAAAGAAAGAAGAAGGAAAAAGGAAAG 57.693 33.333 0.00 0.00 0.00 2.62
2590 7342 8.258007 GGAAAGAAAGAAGAAGGAAAAAGGAAA 58.742 33.333 0.00 0.00 0.00 3.13
2591 7343 7.619698 AGGAAAGAAAGAAGAAGGAAAAAGGAA 59.380 33.333 0.00 0.00 0.00 3.36
2592 7344 7.126061 AGGAAAGAAAGAAGAAGGAAAAAGGA 58.874 34.615 0.00 0.00 0.00 3.36
2593 7345 7.353414 AGGAAAGAAAGAAGAAGGAAAAAGG 57.647 36.000 0.00 0.00 0.00 3.11
2594 7346 7.223582 GCAAGGAAAGAAAGAAGAAGGAAAAAG 59.776 37.037 0.00 0.00 0.00 2.27
2595 7347 7.041721 GCAAGGAAAGAAAGAAGAAGGAAAAA 58.958 34.615 0.00 0.00 0.00 1.94
2596 7348 6.154363 TGCAAGGAAAGAAAGAAGAAGGAAAA 59.846 34.615 0.00 0.00 0.00 2.29
2597 7349 5.656416 TGCAAGGAAAGAAAGAAGAAGGAAA 59.344 36.000 0.00 0.00 0.00 3.13
2598 7350 5.200483 TGCAAGGAAAGAAAGAAGAAGGAA 58.800 37.500 0.00 0.00 0.00 3.36
2599 7351 4.792068 TGCAAGGAAAGAAAGAAGAAGGA 58.208 39.130 0.00 0.00 0.00 3.36
2600 7352 5.300286 TCTTGCAAGGAAAGAAAGAAGAAGG 59.700 40.000 25.73 0.00 30.79 3.46
2601 7353 6.183360 TGTCTTGCAAGGAAAGAAAGAAGAAG 60.183 38.462 25.73 0.00 35.50 2.85
2602 7354 5.652014 TGTCTTGCAAGGAAAGAAAGAAGAA 59.348 36.000 25.73 0.00 35.50 2.52
2603 7355 5.192927 TGTCTTGCAAGGAAAGAAAGAAGA 58.807 37.500 25.73 0.00 35.50 2.87
2604 7356 5.297776 TCTGTCTTGCAAGGAAAGAAAGAAG 59.702 40.000 25.73 6.08 42.46 2.85
2605 7357 5.192927 TCTGTCTTGCAAGGAAAGAAAGAA 58.807 37.500 25.73 0.00 42.46 2.52
2606 7358 4.780815 TCTGTCTTGCAAGGAAAGAAAGA 58.219 39.130 25.73 13.32 42.94 2.52
2607 7359 4.578105 ACTCTGTCTTGCAAGGAAAGAAAG 59.422 41.667 25.73 11.13 39.45 2.62
2608 7360 4.336433 CACTCTGTCTTGCAAGGAAAGAAA 59.664 41.667 25.73 1.89 35.50 2.52
2609 7361 3.879295 CACTCTGTCTTGCAAGGAAAGAA 59.121 43.478 25.73 2.68 35.50 2.52
2610 7362 3.118261 ACACTCTGTCTTGCAAGGAAAGA 60.118 43.478 25.73 21.71 0.00 2.52
2611 7363 3.209410 ACACTCTGTCTTGCAAGGAAAG 58.791 45.455 25.73 19.07 0.00 2.62
2612 7364 3.281727 ACACTCTGTCTTGCAAGGAAA 57.718 42.857 25.73 10.97 0.00 3.13
2613 7365 3.494398 GGTACACTCTGTCTTGCAAGGAA 60.494 47.826 25.73 13.39 0.00 3.36
2614 7366 2.037251 GGTACACTCTGTCTTGCAAGGA 59.963 50.000 25.73 14.25 0.00 3.36
2615 7367 2.417719 GGTACACTCTGTCTTGCAAGG 58.582 52.381 25.73 11.97 0.00 3.61
2616 7368 2.037772 AGGGTACACTCTGTCTTGCAAG 59.962 50.000 20.81 20.81 0.00 4.01
2617 7369 2.047061 AGGGTACACTCTGTCTTGCAA 58.953 47.619 0.00 0.00 0.00 4.08
2618 7370 1.344438 CAGGGTACACTCTGTCTTGCA 59.656 52.381 0.00 0.00 0.00 4.08
2619 7371 1.344763 ACAGGGTACACTCTGTCTTGC 59.655 52.381 9.12 0.00 39.77 4.01
2620 7372 4.281182 AGTTACAGGGTACACTCTGTCTTG 59.719 45.833 17.91 0.00 42.51 3.02
2621 7373 4.281182 CAGTTACAGGGTACACTCTGTCTT 59.719 45.833 17.91 3.20 42.51 3.01
2622 7374 3.827302 CAGTTACAGGGTACACTCTGTCT 59.173 47.826 17.91 7.84 42.51 3.41
2623 7375 3.825014 TCAGTTACAGGGTACACTCTGTC 59.175 47.826 17.91 5.65 42.51 3.51
2624 7376 3.840991 TCAGTTACAGGGTACACTCTGT 58.159 45.455 18.38 18.38 45.10 3.41
2625 7377 4.866508 TTCAGTTACAGGGTACACTCTG 57.133 45.455 7.71 7.71 37.07 3.35
2626 7378 5.084519 TGATTCAGTTACAGGGTACACTCT 58.915 41.667 0.00 0.00 0.00 3.24
2627 7379 5.047235 ACTGATTCAGTTACAGGGTACACTC 60.047 44.000 13.61 0.00 42.59 3.51
2628 7380 4.838986 ACTGATTCAGTTACAGGGTACACT 59.161 41.667 13.61 0.00 42.59 3.55
2629 7381 4.929808 CACTGATTCAGTTACAGGGTACAC 59.070 45.833 16.64 0.00 42.59 2.90
2630 7382 4.562757 GCACTGATTCAGTTACAGGGTACA 60.563 45.833 16.64 0.00 42.59 2.90
2631 7383 3.933332 GCACTGATTCAGTTACAGGGTAC 59.067 47.826 16.64 0.00 42.59 3.34
2632 7384 3.580895 TGCACTGATTCAGTTACAGGGTA 59.419 43.478 16.64 1.77 42.59 3.69
2633 7385 2.371841 TGCACTGATTCAGTTACAGGGT 59.628 45.455 16.64 0.00 42.59 4.34
2634 7386 3.057969 TGCACTGATTCAGTTACAGGG 57.942 47.619 16.64 5.96 42.59 4.45
2635 7387 4.256110 TCATGCACTGATTCAGTTACAGG 58.744 43.478 16.64 17.73 42.59 4.00
2636 7388 5.173664 TCTCATGCACTGATTCAGTTACAG 58.826 41.667 16.64 7.00 42.59 2.74
2637 7389 5.151297 TCTCATGCACTGATTCAGTTACA 57.849 39.130 16.64 17.02 42.59 2.41
2638 7390 6.486253 TTTCTCATGCACTGATTCAGTTAC 57.514 37.500 16.64 12.20 42.59 2.50
2639 7391 8.043113 AGTATTTCTCATGCACTGATTCAGTTA 58.957 33.333 16.64 9.44 42.59 2.24
2640 7392 6.883217 AGTATTTCTCATGCACTGATTCAGTT 59.117 34.615 16.64 0.00 42.59 3.16
2641 7393 6.413052 AGTATTTCTCATGCACTGATTCAGT 58.587 36.000 13.61 13.61 46.51 3.41
2642 7394 6.922247 AGTATTTCTCATGCACTGATTCAG 57.078 37.500 12.17 12.17 37.52 3.02
2643 7395 7.330262 TGTAGTATTTCTCATGCACTGATTCA 58.670 34.615 0.00 0.00 32.10 2.57
2644 7396 7.776933 TGTAGTATTTCTCATGCACTGATTC 57.223 36.000 0.00 0.00 32.10 2.52
2645 7397 7.170489 CGATGTAGTATTTCTCATGCACTGATT 59.830 37.037 0.00 0.00 32.10 2.57
2646 7398 6.644181 CGATGTAGTATTTCTCATGCACTGAT 59.356 38.462 0.00 0.00 32.10 2.90
2647 7399 5.979517 CGATGTAGTATTTCTCATGCACTGA 59.020 40.000 0.00 0.00 0.00 3.41
2648 7400 5.979517 TCGATGTAGTATTTCTCATGCACTG 59.020 40.000 0.00 0.00 0.00 3.66
2649 7401 6.039829 TCTCGATGTAGTATTTCTCATGCACT 59.960 38.462 0.00 0.00 0.00 4.40
2650 7402 6.209361 TCTCGATGTAGTATTTCTCATGCAC 58.791 40.000 0.00 0.00 0.00 4.57
2651 7403 6.391227 TCTCGATGTAGTATTTCTCATGCA 57.609 37.500 0.00 0.00 0.00 3.96
2652 7404 7.273164 CAGATCTCGATGTAGTATTTCTCATGC 59.727 40.741 0.00 0.00 0.00 4.06
2653 7405 8.296000 ACAGATCTCGATGTAGTATTTCTCATG 58.704 37.037 0.00 0.00 0.00 3.07
2654 7406 8.402798 ACAGATCTCGATGTAGTATTTCTCAT 57.597 34.615 0.00 0.00 0.00 2.90
2655 7407 7.809546 ACAGATCTCGATGTAGTATTTCTCA 57.190 36.000 0.00 0.00 0.00 3.27
2656 7408 7.114247 GCAACAGATCTCGATGTAGTATTTCTC 59.886 40.741 0.00 0.00 0.00 2.87
2657 7409 6.920758 GCAACAGATCTCGATGTAGTATTTCT 59.079 38.462 0.00 0.00 0.00 2.52
2658 7410 6.144724 GGCAACAGATCTCGATGTAGTATTTC 59.855 42.308 0.00 0.00 0.00 2.17
2659 7411 5.986135 GGCAACAGATCTCGATGTAGTATTT 59.014 40.000 0.00 0.00 0.00 1.40
2660 7412 5.303078 AGGCAACAGATCTCGATGTAGTATT 59.697 40.000 0.00 0.00 41.41 1.89
2661 7413 4.830046 AGGCAACAGATCTCGATGTAGTAT 59.170 41.667 0.00 0.00 41.41 2.12
2662 7414 4.207955 AGGCAACAGATCTCGATGTAGTA 58.792 43.478 0.00 0.00 41.41 1.82
2663 7415 3.027412 AGGCAACAGATCTCGATGTAGT 58.973 45.455 0.00 0.00 41.41 2.73
2664 7416 3.724508 AGGCAACAGATCTCGATGTAG 57.275 47.619 0.00 0.00 41.41 2.74
2665 7417 4.401202 TGTTAGGCAACAGATCTCGATGTA 59.599 41.667 0.00 0.00 39.75 2.29
2666 7418 3.195610 TGTTAGGCAACAGATCTCGATGT 59.804 43.478 0.00 0.00 39.75 3.06
2667 7419 3.785486 TGTTAGGCAACAGATCTCGATG 58.215 45.455 0.00 0.00 39.75 3.84
2678 7430 4.438744 GCTGATACCACAATGTTAGGCAAC 60.439 45.833 0.00 0.00 35.06 4.17
2679 7431 3.694072 GCTGATACCACAATGTTAGGCAA 59.306 43.478 0.00 0.00 0.00 4.52
2680 7432 3.054434 AGCTGATACCACAATGTTAGGCA 60.054 43.478 0.00 0.00 0.00 4.75
2681 7433 3.545703 AGCTGATACCACAATGTTAGGC 58.454 45.455 0.00 0.00 0.00 3.93
2682 7434 4.752101 GCTAGCTGATACCACAATGTTAGG 59.248 45.833 7.70 0.00 0.00 2.69
2683 7435 4.752101 GGCTAGCTGATACCACAATGTTAG 59.248 45.833 15.72 0.00 0.00 2.34
2684 7436 4.163268 TGGCTAGCTGATACCACAATGTTA 59.837 41.667 15.72 0.00 0.00 2.41
2685 7437 3.054434 TGGCTAGCTGATACCACAATGTT 60.054 43.478 15.72 0.00 0.00 2.71
2686 7438 2.505407 TGGCTAGCTGATACCACAATGT 59.495 45.455 15.72 0.00 0.00 2.71
2687 7439 3.198409 TGGCTAGCTGATACCACAATG 57.802 47.619 15.72 0.00 0.00 2.82
2692 7444 2.317040 GTAGGTGGCTAGCTGATACCA 58.683 52.381 23.09 8.78 35.90 3.25
2693 7445 1.619332 GGTAGGTGGCTAGCTGATACC 59.381 57.143 15.72 16.65 35.90 2.73
2694 7446 2.036089 GTGGTAGGTGGCTAGCTGATAC 59.964 54.545 15.72 12.02 35.90 2.24
2695 7447 2.317040 GTGGTAGGTGGCTAGCTGATA 58.683 52.381 15.72 0.13 35.90 2.15
2696 7448 1.123928 GTGGTAGGTGGCTAGCTGAT 58.876 55.000 15.72 1.12 35.90 2.90
2697 7449 0.976073 GGTGGTAGGTGGCTAGCTGA 60.976 60.000 15.72 0.00 35.90 4.26
2698 7450 1.522569 GGTGGTAGGTGGCTAGCTG 59.477 63.158 15.72 0.00 35.90 4.24
2699 7451 1.689582 GGGTGGTAGGTGGCTAGCT 60.690 63.158 15.72 7.07 38.41 3.32
2700 7452 1.272554 AAGGGTGGTAGGTGGCTAGC 61.273 60.000 6.04 6.04 0.00 3.42
2701 7453 0.831307 GAAGGGTGGTAGGTGGCTAG 59.169 60.000 0.00 0.00 0.00 3.42
2702 7454 0.619543 GGAAGGGTGGTAGGTGGCTA 60.620 60.000 0.00 0.00 0.00 3.93
2703 7455 1.923909 GGAAGGGTGGTAGGTGGCT 60.924 63.158 0.00 0.00 0.00 4.75
2704 7456 1.498176 AAGGAAGGGTGGTAGGTGGC 61.498 60.000 0.00 0.00 0.00 5.01
2705 7457 1.073098 AAAGGAAGGGTGGTAGGTGG 58.927 55.000 0.00 0.00 0.00 4.61
2706 7458 1.886655 GCAAAGGAAGGGTGGTAGGTG 60.887 57.143 0.00 0.00 0.00 4.00
2707 7459 0.404426 GCAAAGGAAGGGTGGTAGGT 59.596 55.000 0.00 0.00 0.00 3.08
2708 7460 0.323451 GGCAAAGGAAGGGTGGTAGG 60.323 60.000 0.00 0.00 0.00 3.18
2709 7461 0.676782 CGGCAAAGGAAGGGTGGTAG 60.677 60.000 0.00 0.00 0.00 3.18
2710 7462 1.377229 CGGCAAAGGAAGGGTGGTA 59.623 57.895 0.00 0.00 0.00 3.25
2711 7463 2.115266 CGGCAAAGGAAGGGTGGT 59.885 61.111 0.00 0.00 0.00 4.16
2712 7464 3.373565 GCGGCAAAGGAAGGGTGG 61.374 66.667 0.00 0.00 0.00 4.61
2713 7465 3.373565 GGCGGCAAAGGAAGGGTG 61.374 66.667 3.07 0.00 0.00 4.61
2714 7466 3.224007 ATGGCGGCAAAGGAAGGGT 62.224 57.895 18.31 0.00 0.00 4.34
2715 7467 2.362889 ATGGCGGCAAAGGAAGGG 60.363 61.111 18.31 0.00 0.00 3.95
2716 7468 2.764314 CGATGGCGGCAAAGGAAGG 61.764 63.158 18.31 0.00 0.00 3.46
2717 7469 2.793946 CGATGGCGGCAAAGGAAG 59.206 61.111 18.31 0.00 0.00 3.46
2718 7470 3.439540 GCGATGGCGGCAAAGGAA 61.440 61.111 18.31 0.00 38.16 3.36
2741 7493 4.796231 AGCGCGGCGAACTGGTAG 62.796 66.667 28.54 0.00 0.00 3.18
2746 7498 4.980805 TTTCCAGCGCGGCGAACT 62.981 61.111 28.54 11.96 33.14 3.01
2747 7499 4.736631 GTTTCCAGCGCGGCGAAC 62.737 66.667 28.54 16.87 33.14 3.95
2748 7500 4.980805 AGTTTCCAGCGCGGCGAA 62.981 61.111 28.54 8.51 33.14 4.70
2757 7509 3.121030 CTGGCGGCGAGTTTCCAG 61.121 66.667 12.98 13.95 39.95 3.86
2758 7510 3.171828 TTCTGGCGGCGAGTTTCCA 62.172 57.895 12.98 7.10 0.00 3.53
2759 7511 2.358247 TTCTGGCGGCGAGTTTCC 60.358 61.111 12.98 1.37 0.00 3.13
2760 7512 3.028366 GCTTCTGGCGGCGAGTTTC 62.028 63.158 12.98 0.00 0.00 2.78
2761 7513 3.050275 GCTTCTGGCGGCGAGTTT 61.050 61.111 12.98 0.00 0.00 2.66
2762 7514 3.825160 TTGCTTCTGGCGGCGAGTT 62.825 57.895 12.98 0.00 45.43 3.01
2763 7515 4.314440 TTGCTTCTGGCGGCGAGT 62.314 61.111 12.98 0.00 45.43 4.18
2764 7516 3.494336 CTTGCTTCTGGCGGCGAG 61.494 66.667 12.98 5.56 45.43 5.03
2765 7517 4.314440 ACTTGCTTCTGGCGGCGA 62.314 61.111 12.98 1.50 45.43 5.54
2766 7518 4.093952 CACTTGCTTCTGGCGGCG 62.094 66.667 0.51 0.51 45.43 6.46
2767 7519 4.410743 GCACTTGCTTCTGGCGGC 62.411 66.667 0.00 0.00 45.43 6.53
2768 7520 4.093952 CGCACTTGCTTCTGGCGG 62.094 66.667 0.00 0.00 45.43 6.13
2770 7522 4.748679 CGCGCACTTGCTTCTGGC 62.749 66.667 8.75 0.00 39.32 4.85
2771 7523 3.043713 TCGCGCACTTGCTTCTGG 61.044 61.111 8.75 0.00 39.32 3.86
2772 7524 2.171940 GTCGCGCACTTGCTTCTG 59.828 61.111 8.75 0.00 39.32 3.02
2773 7525 3.406361 CGTCGCGCACTTGCTTCT 61.406 61.111 8.75 0.00 39.32 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.