Multiple sequence alignment - TraesCS6B01G129700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G129700 chr6B 100.000 4591 0 0 1 4591 126141659 126146249 0.000000e+00 8479.0
1 TraesCS6B01G129700 chr6A 92.419 2757 138 39 1 2715 70424589 70427316 0.000000e+00 3868.0
2 TraesCS6B01G129700 chr6A 93.826 907 38 12 3152 4052 70427594 70428488 0.000000e+00 1349.0
3 TraesCS6B01G129700 chr6A 92.857 210 15 0 4167 4376 70428729 70428938 5.770000e-79 305.0
4 TraesCS6B01G129700 chr6A 91.453 117 7 2 4051 4166 70428559 70428673 1.710000e-34 158.0
5 TraesCS6B01G129700 chr6D 90.971 2780 151 54 1 2715 55929364 55932108 0.000000e+00 3651.0
6 TraesCS6B01G129700 chr6D 91.769 899 54 12 3152 4046 55932387 55933269 0.000000e+00 1232.0
7 TraesCS6B01G129700 chr6D 90.598 117 8 3 4052 4166 55933355 55933470 7.960000e-33 152.0
8 TraesCS6B01G129700 chr5A 88.551 1808 165 28 933 2715 700466654 700468444 0.000000e+00 2154.0
9 TraesCS6B01G129700 chr2A 88.379 1807 157 30 933 2715 585311692 585309915 0.000000e+00 2124.0
10 TraesCS6B01G129700 chr2A 90.025 401 25 10 933 1318 756801790 756802190 5.300000e-139 505.0
11 TraesCS6B01G129700 chr4A 87.907 1505 146 23 936 2416 422206987 422205495 0.000000e+00 1738.0
12 TraesCS6B01G129700 chr4A 88.963 299 25 4 2417 2715 422204880 422204590 3.380000e-96 363.0
13 TraesCS6B01G129700 chr3B 89.516 1116 87 21 933 2025 10904050 10905158 0.000000e+00 1386.0
14 TraesCS6B01G129700 chr3B 93.455 382 25 0 1644 2025 547647527 547647908 6.670000e-158 568.0
15 TraesCS6B01G129700 chr3B 94.570 221 12 0 933 1153 547646610 547646830 4.400000e-90 342.0
16 TraesCS6B01G129700 chr3B 90.265 226 17 4 2490 2715 547647906 547648126 1.620000e-74 291.0
17 TraesCS6B01G129700 chr3B 76.457 429 84 8 4175 4589 43823669 43824094 2.780000e-52 217.0
18 TraesCS6B01G129700 chr3B 86.170 188 22 2 2756 2943 10905374 10905557 2.800000e-47 200.0
19 TraesCS6B01G129700 chr3B 97.436 39 1 0 2712 2750 360110457 360110495 2.960000e-07 67.6
20 TraesCS6B01G129700 chr1B 89.068 1116 92 17 933 2025 86948686 86949794 0.000000e+00 1358.0
21 TraesCS6B01G129700 chr1B 91.150 226 15 4 2490 2715 86949792 86950012 7.460000e-78 302.0
22 TraesCS6B01G129700 chr7D 91.298 701 38 16 958 1642 530089616 530088923 0.000000e+00 935.0
23 TraesCS6B01G129700 chr7D 90.144 416 30 8 2303 2715 530088930 530088523 8.750000e-147 531.0
24 TraesCS6B01G129700 chr7D 76.291 426 83 10 4175 4585 36904592 36905014 1.290000e-50 211.0
25 TraesCS6B01G129700 chr7D 97.222 36 1 0 2712 2747 18875373 18875338 1.380000e-05 62.1
26 TraesCS6B01G129700 chr7B 92.550 349 26 0 1677 2025 714861028 714860680 6.860000e-138 501.0
27 TraesCS6B01G129700 chr7B 92.727 220 16 0 934 1153 714861677 714861458 7.410000e-83 318.0
28 TraesCS6B01G129700 chr7B 91.593 226 15 3 2490 2715 714860682 714860461 4.460000e-80 309.0
29 TraesCS6B01G129700 chr7B 76.224 429 84 10 4175 4589 244273539 244273963 1.290000e-50 211.0
30 TraesCS6B01G129700 chr4D 78.528 326 69 1 4175 4499 373576805 373577130 3.600000e-51 213.0
31 TraesCS6B01G129700 chr5B 76.279 430 83 10 4175 4589 694230174 694230599 1.290000e-50 211.0
32 TraesCS6B01G129700 chr5B 97.436 39 1 0 2712 2750 290386250 290386288 2.960000e-07 67.6
33 TraesCS6B01G129700 chr1D 76.224 429 84 11 4175 4589 409012066 409011642 1.290000e-50 211.0
34 TraesCS6B01G129700 chr1D 76.157 432 81 14 4174 4589 247836494 247836919 1.670000e-49 207.0
35 TraesCS6B01G129700 chr1A 75.991 429 86 9 4175 4589 464124350 464123925 6.020000e-49 206.0
36 TraesCS6B01G129700 chr5D 100.000 39 0 0 2712 2750 256458043 256458081 6.370000e-09 73.1
37 TraesCS6B01G129700 chr3D 100.000 39 0 0 2712 2750 273466430 273466392 6.370000e-09 73.1
38 TraesCS6B01G129700 chr3D 100.000 37 0 0 2712 2748 219572026 219571990 8.240000e-08 69.4
39 TraesCS6B01G129700 chr3A 100.000 39 0 0 2712 2750 357065655 357065617 6.370000e-09 73.1
40 TraesCS6B01G129700 chr7A 100.000 36 0 0 2712 2747 19189320 19189285 2.960000e-07 67.6
41 TraesCS6B01G129700 chrUn 97.368 38 1 0 2712 2749 176717893 176717930 1.070000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G129700 chr6B 126141659 126146249 4590 False 8479.000000 8479 100.000000 1 4591 1 chr6B.!!$F1 4590
1 TraesCS6B01G129700 chr6A 70424589 70428938 4349 False 1420.000000 3868 92.638750 1 4376 4 chr6A.!!$F1 4375
2 TraesCS6B01G129700 chr6D 55929364 55933470 4106 False 1678.333333 3651 91.112667 1 4166 3 chr6D.!!$F1 4165
3 TraesCS6B01G129700 chr5A 700466654 700468444 1790 False 2154.000000 2154 88.551000 933 2715 1 chr5A.!!$F1 1782
4 TraesCS6B01G129700 chr2A 585309915 585311692 1777 True 2124.000000 2124 88.379000 933 2715 1 chr2A.!!$R1 1782
5 TraesCS6B01G129700 chr4A 422204590 422206987 2397 True 1050.500000 1738 88.435000 936 2715 2 chr4A.!!$R1 1779
6 TraesCS6B01G129700 chr3B 10904050 10905557 1507 False 793.000000 1386 87.843000 933 2943 2 chr3B.!!$F3 2010
7 TraesCS6B01G129700 chr3B 547646610 547648126 1516 False 400.333333 568 92.763333 933 2715 3 chr3B.!!$F4 1782
8 TraesCS6B01G129700 chr1B 86948686 86950012 1326 False 830.000000 1358 90.109000 933 2715 2 chr1B.!!$F1 1782
9 TraesCS6B01G129700 chr7D 530088523 530089616 1093 True 733.000000 935 90.721000 958 2715 2 chr7D.!!$R2 1757
10 TraesCS6B01G129700 chr7B 714860461 714861677 1216 True 376.000000 501 92.290000 934 2715 3 chr7B.!!$R1 1781


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
700 733 0.099968 TTTATGCCCGAGACGAGACG 59.900 55.0 0.00 0.0 0.0 4.18 F
837 873 0.107557 ATCAGCGCATCACATGTCCA 60.108 50.0 11.47 0.0 0.0 4.02 F
1694 2259 0.247736 AGGCAGCAGTTCTAAGGACG 59.752 55.0 0.00 0.0 0.0 4.79 F
3044 4240 0.168788 ACGCTCATTTTCATGCCACG 59.831 50.0 0.00 0.0 0.0 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1579 2144 0.381801 GGCAATTGGTGACCATAGCG 59.618 55.0 4.56 0.0 31.53 4.26 R
2814 4002 0.112218 ATGCTGGCACCAGTACCAAA 59.888 50.0 17.72 0.0 45.24 3.28 R
3058 4254 0.106669 AGTGGATGATCGACCGAGGA 60.107 55.0 3.88 0.0 0.00 3.71 R
4533 5869 0.319405 CTTTGCAGGGCCTCTTTTGG 59.681 55.0 0.95 0.0 0.00 3.28 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
182 192 3.967335 CGTCGCGATCCCCCTCTC 61.967 72.222 14.06 0.00 0.00 3.20
193 203 4.548513 CCCTCTCCCTCCTCCCCG 62.549 77.778 0.00 0.00 0.00 5.73
220 230 2.982130 GCGGCCTTCTCCTTCTCA 59.018 61.111 0.00 0.00 0.00 3.27
694 727 1.941325 CTGAGGTTTATGCCCGAGAC 58.059 55.000 0.00 0.00 0.00 3.36
698 731 0.458669 GGTTTATGCCCGAGACGAGA 59.541 55.000 0.00 0.00 0.00 4.04
699 732 1.557651 GTTTATGCCCGAGACGAGAC 58.442 55.000 0.00 0.00 0.00 3.36
700 733 0.099968 TTTATGCCCGAGACGAGACG 59.900 55.000 0.00 0.00 0.00 4.18
701 734 0.745486 TTATGCCCGAGACGAGACGA 60.745 55.000 0.00 0.00 0.00 4.20
702 735 0.745486 TATGCCCGAGACGAGACGAA 60.745 55.000 0.00 0.00 0.00 3.85
822 858 2.441532 CCAGCCCAAGCCCATCAG 60.442 66.667 0.00 0.00 41.25 2.90
831 867 2.825075 AAGCCCATCAGCGCATCACA 62.825 55.000 11.47 0.00 38.01 3.58
832 868 2.191513 GCCCATCAGCGCATCACAT 61.192 57.895 11.47 0.00 0.00 3.21
837 873 0.107557 ATCAGCGCATCACATGTCCA 60.108 50.000 11.47 0.00 0.00 4.02
853 896 1.840635 GTCCAGGAGCCCAGTTATCTT 59.159 52.381 0.00 0.00 0.00 2.40
868 916 0.692419 ATCTTGGCCCGAGACCATCT 60.692 55.000 1.77 0.00 36.96 2.90
891 939 3.498777 GGCCCGTAAGCATTAATTCTCTC 59.501 47.826 0.00 0.00 28.70 3.20
892 940 4.381411 GCCCGTAAGCATTAATTCTCTCT 58.619 43.478 0.00 0.00 28.70 3.10
893 941 4.212214 GCCCGTAAGCATTAATTCTCTCTG 59.788 45.833 0.00 0.00 28.70 3.35
894 942 4.752101 CCCGTAAGCATTAATTCTCTCTGG 59.248 45.833 0.00 0.00 28.70 3.86
1194 1260 2.254051 GCGCGGTTGCTTTGCTTA 59.746 55.556 8.83 0.00 39.65 3.09
1199 1274 1.873270 CGGTTGCTTTGCTTACCCCC 61.873 60.000 8.15 0.00 32.99 5.40
1224 1299 5.888982 AAACTGAGAGGTTTCTGGTCTTA 57.111 39.130 0.00 0.00 34.79 2.10
1394 1565 4.225984 GTTTGTGTTTGCGATGCTGATTA 58.774 39.130 0.00 0.00 0.00 1.75
1488 1873 1.526887 GAGGTTCGATGTGTGTGTGTG 59.473 52.381 0.00 0.00 0.00 3.82
1490 1875 1.003972 GGTTCGATGTGTGTGTGTGTG 60.004 52.381 0.00 0.00 0.00 3.82
1499 1884 3.755905 TGTGTGTGTGTGTGATCTTTTGT 59.244 39.130 0.00 0.00 0.00 2.83
1535 2093 8.318412 TGTTAGTGTATCCATTGTAACTGTGAT 58.682 33.333 0.00 0.00 0.00 3.06
1545 2104 2.632512 TGTAACTGTGATGGCTGACTGA 59.367 45.455 0.00 0.00 0.00 3.41
1609 2174 0.610785 CCAATTGCCCCGGTGTTAGT 60.611 55.000 0.00 0.00 0.00 2.24
1663 2228 0.881118 GAACTGAGGATTTTGCCGCA 59.119 50.000 0.00 0.00 36.30 5.69
1694 2259 0.247736 AGGCAGCAGTTCTAAGGACG 59.752 55.000 0.00 0.00 0.00 4.79
1718 2283 0.872881 AATAATCGACCGGGCGTTCG 60.873 55.000 32.26 18.17 0.00 3.95
1735 2300 2.796651 GCTCTGCTGGGATTTGCG 59.203 61.111 0.00 0.00 0.00 4.85
1754 2319 0.914417 GGAGGGGAATGTCCAGGACA 60.914 60.000 25.06 25.06 46.90 4.02
1756 2321 0.475632 AGGGGAATGTCCAGGACACA 60.476 55.000 25.35 3.58 45.65 3.72
1805 2370 1.503542 GCAATGGAGAACACAGCCG 59.496 57.895 0.00 0.00 0.00 5.52
1870 2435 1.101049 ACAAACTGGTGGCTTCCGTG 61.101 55.000 0.00 0.00 0.00 4.94
1925 2490 2.095853 GCCCGTATTCATGTGTCTGTTG 59.904 50.000 0.00 0.00 0.00 3.33
2046 2611 3.181486 CGCCAGAGCTACACTATGAAAGA 60.181 47.826 0.00 0.00 40.18 2.52
2106 2672 4.707030 TGGCTAGCAAATGAAAGTCATG 57.293 40.909 18.24 0.00 37.15 3.07
2123 2689 8.450578 AAAGTCATGACAGATGTTTTGAAGTA 57.549 30.769 27.02 0.00 0.00 2.24
2127 2693 7.587757 GTCATGACAGATGTTTTGAAGTACAAC 59.412 37.037 21.07 0.00 38.29 3.32
2153 2719 9.143631 CCTTTATTACAGAAAAATGCTCCTTTG 57.856 33.333 0.00 0.00 0.00 2.77
2155 2721 5.467035 TTACAGAAAAATGCTCCTTTGGG 57.533 39.130 0.00 0.00 0.00 4.12
2158 2724 4.164030 ACAGAAAAATGCTCCTTTGGGTTT 59.836 37.500 0.00 0.00 0.00 3.27
2160 2726 5.237127 CAGAAAAATGCTCCTTTGGGTTTTC 59.763 40.000 0.00 0.00 35.04 2.29
2165 2732 3.103742 TGCTCCTTTGGGTTTTCTTGTT 58.896 40.909 0.00 0.00 0.00 2.83
2219 2786 9.573133 CCTTCCAAATATAACTTGTTTGTCATC 57.427 33.333 0.00 0.00 32.41 2.92
2236 2803 5.977635 TGTCATCTCCAGTCAATATTTCGT 58.022 37.500 0.00 0.00 0.00 3.85
2241 2808 8.204160 TCATCTCCAGTCAATATTTCGTTGTAT 58.796 33.333 0.00 0.00 0.00 2.29
2242 2809 7.770801 TCTCCAGTCAATATTTCGTTGTATG 57.229 36.000 0.00 0.00 0.00 2.39
2244 2811 7.491372 TCTCCAGTCAATATTTCGTTGTATGAC 59.509 37.037 0.00 0.00 0.00 3.06
2264 2831 0.463295 ATGACTCTGCAATGGCTCGG 60.463 55.000 0.00 0.00 41.91 4.63
2299 2867 4.592942 AGCCATCTCATGAAAGCTAACAA 58.407 39.130 0.00 0.00 34.30 2.83
2300 2868 4.639310 AGCCATCTCATGAAAGCTAACAAG 59.361 41.667 0.00 0.00 34.30 3.16
2301 2869 4.637534 GCCATCTCATGAAAGCTAACAAGA 59.362 41.667 0.00 0.00 0.00 3.02
2337 2905 8.495148 GTTTTGTGAAGTGAAGTTGAAAAATGT 58.505 29.630 0.00 0.00 0.00 2.71
2362 2930 3.638860 TCTAATACATGACAGGACCGGT 58.361 45.455 6.92 6.92 0.00 5.28
2366 2934 1.475403 ACATGACAGGACCGGTCTAG 58.525 55.000 32.52 25.75 36.26 2.43
2368 2936 1.678627 CATGACAGGACCGGTCTAGAG 59.321 57.143 32.52 21.13 36.26 2.43
2369 2937 0.989602 TGACAGGACCGGTCTAGAGA 59.010 55.000 32.52 12.70 36.26 3.10
2370 2938 1.564818 TGACAGGACCGGTCTAGAGAT 59.435 52.381 32.52 13.45 36.26 2.75
2371 2939 2.775960 TGACAGGACCGGTCTAGAGATA 59.224 50.000 32.52 11.74 36.26 1.98
2373 2941 3.754323 GACAGGACCGGTCTAGAGATATG 59.246 52.174 32.52 19.04 32.54 1.78
2404 2974 4.835056 TGCTACATCAGTCTATGTGCCTAT 59.165 41.667 0.00 0.00 40.29 2.57
2429 3615 7.658179 TTTTTGTTGTTTTATGCACTCAACA 57.342 28.000 15.04 15.04 43.84 3.33
2434 3622 5.528043 TGTTTTATGCACTCAACAATGGT 57.472 34.783 4.37 0.00 0.00 3.55
2437 3625 4.539152 GCACTCAACAATGGTGCG 57.461 55.556 0.00 0.00 40.96 5.34
2444 3632 4.570369 CACTCAACAATGGTGCGATGTATA 59.430 41.667 0.00 0.00 0.00 1.47
2458 3646 5.174943 TGCGATGTATAGTACAATGAAAGCG 59.825 40.000 0.00 0.00 42.76 4.68
2497 3685 7.823665 TGACACGTCTAGACTTACACAAATAT 58.176 34.615 20.34 0.00 0.00 1.28
2532 3720 2.538512 TCTGCAGGAATCATCATCCG 57.461 50.000 15.13 0.00 42.03 4.18
2632 3820 8.422577 AAAGGTCTGCTTAATCCACTTTTTAT 57.577 30.769 0.00 0.00 0.00 1.40
2702 3890 2.852449 TGCAAGTTTGTTCCCGTGATA 58.148 42.857 0.00 0.00 0.00 2.15
2715 3903 7.037438 TGTTCCCGTGATACTGTTTATTACTC 58.963 38.462 0.00 0.00 0.00 2.59
2717 3905 5.069516 TCCCGTGATACTGTTTATTACTCCC 59.930 44.000 0.00 0.00 0.00 4.30
2718 3906 5.070047 CCCGTGATACTGTTTATTACTCCCT 59.930 44.000 0.00 0.00 0.00 4.20
2719 3907 6.214399 CCGTGATACTGTTTATTACTCCCTC 58.786 44.000 0.00 0.00 0.00 4.30
2721 3909 6.918569 CGTGATACTGTTTATTACTCCCTCTG 59.081 42.308 0.00 0.00 0.00 3.35
2722 3910 7.416438 CGTGATACTGTTTATTACTCCCTCTGT 60.416 40.741 0.00 0.00 0.00 3.41
2723 3911 8.910944 GTGATACTGTTTATTACTCCCTCTGTA 58.089 37.037 0.00 0.00 0.00 2.74
2724 3912 8.910944 TGATACTGTTTATTACTCCCTCTGTAC 58.089 37.037 0.00 0.00 0.00 2.90
2725 3913 8.834004 ATACTGTTTATTACTCCCTCTGTACA 57.166 34.615 0.00 0.00 0.00 2.90
2726 3914 7.735326 ACTGTTTATTACTCCCTCTGTACAT 57.265 36.000 0.00 0.00 0.00 2.29
2727 3915 8.834004 ACTGTTTATTACTCCCTCTGTACATA 57.166 34.615 0.00 0.00 0.00 2.29
2728 3916 9.263446 ACTGTTTATTACTCCCTCTGTACATAA 57.737 33.333 0.00 0.00 0.00 1.90
2738 3926 8.794553 ACTCCCTCTGTACATAAATATAAGACG 58.205 37.037 0.00 0.00 0.00 4.18
2739 3927 8.701908 TCCCTCTGTACATAAATATAAGACGT 57.298 34.615 0.00 0.00 0.00 4.34
2740 3928 9.139734 TCCCTCTGTACATAAATATAAGACGTT 57.860 33.333 0.00 0.00 0.00 3.99
2741 3929 9.760077 CCCTCTGTACATAAATATAAGACGTTT 57.240 33.333 0.00 0.00 0.00 3.60
2758 3946 8.578448 AAGACGTTTTAGAGACTAGGAATACT 57.422 34.615 0.00 0.00 0.00 2.12
2759 3947 8.578448 AGACGTTTTAGAGACTAGGAATACTT 57.422 34.615 0.00 0.00 0.00 2.24
2760 3948 9.022884 AGACGTTTTAGAGACTAGGAATACTTT 57.977 33.333 0.00 0.00 0.00 2.66
2761 3949 8.983307 ACGTTTTAGAGACTAGGAATACTTTG 57.017 34.615 0.00 0.00 0.00 2.77
2762 3950 8.583296 ACGTTTTAGAGACTAGGAATACTTTGT 58.417 33.333 0.00 0.00 0.00 2.83
2763 3951 9.420551 CGTTTTAGAGACTAGGAATACTTTGTT 57.579 33.333 0.00 0.00 0.00 2.83
2810 3998 4.016444 ACACTGCAGTTCTTCCTTTTTCA 58.984 39.130 18.94 0.00 0.00 2.69
2812 4000 5.047377 ACACTGCAGTTCTTCCTTTTTCAAA 60.047 36.000 18.94 0.00 0.00 2.69
2813 4001 5.517770 CACTGCAGTTCTTCCTTTTTCAAAG 59.482 40.000 18.94 0.00 0.00 2.77
2814 4002 5.185828 ACTGCAGTTCTTCCTTTTTCAAAGT 59.814 36.000 15.25 0.00 0.00 2.66
2816 4004 6.463360 TGCAGTTCTTCCTTTTTCAAAGTTT 58.537 32.000 0.00 0.00 0.00 2.66
2841 4029 2.440409 CTGGTGCCAGCATTAGAAACT 58.560 47.619 5.19 0.00 37.24 2.66
2844 4032 2.094545 GGTGCCAGCATTAGAAACTTGG 60.095 50.000 0.00 0.00 0.00 3.61
2851 4039 4.697352 CAGCATTAGAAACTTGGCAGTACT 59.303 41.667 0.00 0.00 30.68 2.73
2852 4040 5.182001 CAGCATTAGAAACTTGGCAGTACTT 59.818 40.000 0.00 0.00 30.68 2.24
2853 4041 5.770162 AGCATTAGAAACTTGGCAGTACTTT 59.230 36.000 0.00 0.00 30.68 2.66
2925 4113 7.606135 TGATATTAATTCCTTCGGTAGTGGA 57.394 36.000 0.00 0.00 0.00 4.02
2932 4120 2.298163 TCCTTCGGTAGTGGACAGTTTC 59.702 50.000 0.00 0.00 0.00 2.78
2936 4124 3.489355 TCGGTAGTGGACAGTTTCTGTA 58.511 45.455 2.29 0.00 45.44 2.74
2938 4126 4.525487 TCGGTAGTGGACAGTTTCTGTAAT 59.475 41.667 2.29 0.00 45.44 1.89
2939 4127 5.711506 TCGGTAGTGGACAGTTTCTGTAATA 59.288 40.000 2.29 0.00 45.44 0.98
2940 4128 6.209192 TCGGTAGTGGACAGTTTCTGTAATAA 59.791 38.462 2.29 0.00 45.44 1.40
2941 4129 7.039882 CGGTAGTGGACAGTTTCTGTAATAAT 58.960 38.462 2.29 0.00 45.44 1.28
2942 4130 8.192774 CGGTAGTGGACAGTTTCTGTAATAATA 58.807 37.037 2.29 0.00 45.44 0.98
2943 4131 9.880157 GGTAGTGGACAGTTTCTGTAATAATAA 57.120 33.333 2.29 0.00 45.44 1.40
2981 4170 2.533266 AGCTATTACTCACCATGGCG 57.467 50.000 13.04 1.26 32.40 5.69
2982 4171 0.868406 GCTATTACTCACCATGGCGC 59.132 55.000 13.04 0.00 0.00 6.53
2983 4172 1.512926 CTATTACTCACCATGGCGCC 58.487 55.000 22.73 22.73 0.00 6.53
2985 4174 0.179045 ATTACTCACCATGGCGCCTC 60.179 55.000 29.70 1.40 0.00 4.70
2986 4175 1.264749 TTACTCACCATGGCGCCTCT 61.265 55.000 29.70 12.59 0.00 3.69
2987 4176 1.960040 TACTCACCATGGCGCCTCTG 61.960 60.000 29.70 23.52 0.00 3.35
2988 4177 4.100084 TCACCATGGCGCCTCTGG 62.100 66.667 33.64 33.64 36.09 3.86
2989 4178 4.415150 CACCATGGCGCCTCTGGT 62.415 66.667 34.70 34.70 44.02 4.00
2990 4179 3.650950 ACCATGGCGCCTCTGGTT 61.651 61.111 34.70 23.81 40.34 3.67
2992 4181 1.819632 CCATGGCGCCTCTGGTTAC 60.820 63.158 29.74 4.25 0.00 2.50
2996 4185 0.179015 TGGCGCCTCTGGTTACAAAA 60.179 50.000 29.70 0.00 0.00 2.44
3042 4238 2.223548 GCATACGCTCATTTTCATGCCA 60.224 45.455 0.00 0.00 34.18 4.92
3043 4239 3.365832 CATACGCTCATTTTCATGCCAC 58.634 45.455 0.00 0.00 0.00 5.01
3044 4240 0.168788 ACGCTCATTTTCATGCCACG 59.831 50.000 0.00 0.00 0.00 4.94
3045 4241 0.523968 CGCTCATTTTCATGCCACGG 60.524 55.000 0.00 0.00 0.00 4.94
3046 4242 0.527565 GCTCATTTTCATGCCACGGT 59.472 50.000 0.00 0.00 0.00 4.83
3047 4243 1.067635 GCTCATTTTCATGCCACGGTT 60.068 47.619 0.00 0.00 0.00 4.44
3048 4244 2.610232 GCTCATTTTCATGCCACGGTTT 60.610 45.455 0.00 0.00 0.00 3.27
3049 4245 3.366883 GCTCATTTTCATGCCACGGTTTA 60.367 43.478 0.00 0.00 0.00 2.01
3050 4246 4.677779 GCTCATTTTCATGCCACGGTTTAT 60.678 41.667 0.00 0.00 0.00 1.40
3051 4247 4.992688 TCATTTTCATGCCACGGTTTATC 58.007 39.130 0.00 0.00 0.00 1.75
3052 4248 4.460731 TCATTTTCATGCCACGGTTTATCA 59.539 37.500 0.00 0.00 0.00 2.15
3053 4249 4.855715 TTTTCATGCCACGGTTTATCAA 57.144 36.364 0.00 0.00 0.00 2.57
3054 4250 4.433186 TTTCATGCCACGGTTTATCAAG 57.567 40.909 0.00 0.00 0.00 3.02
3055 4251 3.342377 TCATGCCACGGTTTATCAAGA 57.658 42.857 0.00 0.00 0.00 3.02
3056 4252 3.884895 TCATGCCACGGTTTATCAAGAT 58.115 40.909 0.00 0.00 0.00 2.40
3057 4253 4.269183 TCATGCCACGGTTTATCAAGATT 58.731 39.130 0.00 0.00 0.00 2.40
3058 4254 4.704540 TCATGCCACGGTTTATCAAGATTT 59.295 37.500 0.00 0.00 0.00 2.17
3059 4255 4.695217 TGCCACGGTTTATCAAGATTTC 57.305 40.909 0.00 0.00 0.00 2.17
3060 4256 3.442273 TGCCACGGTTTATCAAGATTTCC 59.558 43.478 0.00 0.00 0.00 3.13
3061 4257 3.694566 GCCACGGTTTATCAAGATTTCCT 59.305 43.478 0.00 0.00 0.00 3.36
3062 4258 4.201920 GCCACGGTTTATCAAGATTTCCTC 60.202 45.833 0.00 0.00 0.00 3.71
3063 4259 4.034048 CCACGGTTTATCAAGATTTCCTCG 59.966 45.833 0.00 0.00 0.00 4.63
3064 4260 4.034048 CACGGTTTATCAAGATTTCCTCGG 59.966 45.833 0.00 0.00 0.00 4.63
3065 4261 4.189231 CGGTTTATCAAGATTTCCTCGGT 58.811 43.478 0.00 0.00 0.00 4.69
3066 4262 4.270325 CGGTTTATCAAGATTTCCTCGGTC 59.730 45.833 0.00 0.00 0.00 4.79
3067 4263 4.270325 GGTTTATCAAGATTTCCTCGGTCG 59.730 45.833 0.00 0.00 0.00 4.79
3068 4264 4.994907 TTATCAAGATTTCCTCGGTCGA 57.005 40.909 0.00 0.00 0.00 4.20
3069 4265 5.531122 TTATCAAGATTTCCTCGGTCGAT 57.469 39.130 0.00 0.00 0.00 3.59
3070 4266 3.438297 TCAAGATTTCCTCGGTCGATC 57.562 47.619 0.00 0.00 0.00 3.69
3071 4267 2.758423 TCAAGATTTCCTCGGTCGATCA 59.242 45.455 0.00 0.00 0.00 2.92
3072 4268 3.384789 TCAAGATTTCCTCGGTCGATCAT 59.615 43.478 0.00 0.00 0.00 2.45
3073 4269 3.651803 AGATTTCCTCGGTCGATCATC 57.348 47.619 0.00 0.00 0.00 2.92
3074 4270 2.297597 AGATTTCCTCGGTCGATCATCC 59.702 50.000 0.00 0.00 0.00 3.51
3075 4271 1.480789 TTTCCTCGGTCGATCATCCA 58.519 50.000 0.00 0.00 0.00 3.41
3076 4272 0.744874 TTCCTCGGTCGATCATCCAC 59.255 55.000 0.00 0.00 0.00 4.02
3077 4273 0.106669 TCCTCGGTCGATCATCCACT 60.107 55.000 0.00 0.00 0.00 4.00
3078 4274 0.747255 CCTCGGTCGATCATCCACTT 59.253 55.000 0.00 0.00 0.00 3.16
3079 4275 1.954382 CCTCGGTCGATCATCCACTTA 59.046 52.381 0.00 0.00 0.00 2.24
3080 4276 2.558795 CCTCGGTCGATCATCCACTTAT 59.441 50.000 0.00 0.00 0.00 1.73
3081 4277 3.366476 CCTCGGTCGATCATCCACTTATC 60.366 52.174 0.00 0.00 0.00 1.75
3082 4278 2.557056 TCGGTCGATCATCCACTTATCC 59.443 50.000 0.00 0.00 0.00 2.59
3083 4279 2.558795 CGGTCGATCATCCACTTATCCT 59.441 50.000 0.00 0.00 0.00 3.24
3084 4280 3.005897 CGGTCGATCATCCACTTATCCTT 59.994 47.826 0.00 0.00 0.00 3.36
3085 4281 4.561105 GGTCGATCATCCACTTATCCTTC 58.439 47.826 0.00 0.00 0.00 3.46
3086 4282 4.282195 GGTCGATCATCCACTTATCCTTCT 59.718 45.833 0.00 0.00 0.00 2.85
3087 4283 5.221541 GGTCGATCATCCACTTATCCTTCTT 60.222 44.000 0.00 0.00 0.00 2.52
3088 4284 6.284459 GTCGATCATCCACTTATCCTTCTTT 58.716 40.000 0.00 0.00 0.00 2.52
3089 4285 6.201806 GTCGATCATCCACTTATCCTTCTTTG 59.798 42.308 0.00 0.00 0.00 2.77
3090 4286 6.098266 TCGATCATCCACTTATCCTTCTTTGA 59.902 38.462 0.00 0.00 0.00 2.69
3091 4287 6.933521 CGATCATCCACTTATCCTTCTTTGAT 59.066 38.462 0.00 0.00 0.00 2.57
3092 4288 8.090831 CGATCATCCACTTATCCTTCTTTGATA 58.909 37.037 0.00 0.00 0.00 2.15
3093 4289 9.213799 GATCATCCACTTATCCTTCTTTGATAC 57.786 37.037 0.00 0.00 0.00 2.24
3094 4290 8.089625 TCATCCACTTATCCTTCTTTGATACA 57.910 34.615 0.00 0.00 0.00 2.29
3095 4291 7.987458 TCATCCACTTATCCTTCTTTGATACAC 59.013 37.037 0.00 0.00 0.00 2.90
3096 4292 6.650120 TCCACTTATCCTTCTTTGATACACC 58.350 40.000 0.00 0.00 0.00 4.16
3097 4293 6.443849 TCCACTTATCCTTCTTTGATACACCT 59.556 38.462 0.00 0.00 0.00 4.00
3098 4294 7.037586 TCCACTTATCCTTCTTTGATACACCTT 60.038 37.037 0.00 0.00 0.00 3.50
3099 4295 8.265055 CCACTTATCCTTCTTTGATACACCTTA 58.735 37.037 0.00 0.00 0.00 2.69
3100 4296 9.838339 CACTTATCCTTCTTTGATACACCTTAT 57.162 33.333 0.00 0.00 0.00 1.73
3106 4302 9.542462 TCCTTCTTTGATACACCTTATAAATCG 57.458 33.333 0.00 0.00 0.00 3.34
3107 4303 8.774586 CCTTCTTTGATACACCTTATAAATCGG 58.225 37.037 0.00 0.00 0.00 4.18
3108 4304 9.542462 CTTCTTTGATACACCTTATAAATCGGA 57.458 33.333 0.00 0.00 0.00 4.55
3109 4305 9.893634 TTCTTTGATACACCTTATAAATCGGAA 57.106 29.630 0.00 0.00 0.00 4.30
3110 4306 9.893634 TCTTTGATACACCTTATAAATCGGAAA 57.106 29.630 0.00 0.00 0.00 3.13
3113 4309 8.441312 TGATACACCTTATAAATCGGAAAACC 57.559 34.615 0.00 0.00 0.00 3.27
3114 4310 8.269317 TGATACACCTTATAAATCGGAAAACCT 58.731 33.333 0.00 0.00 0.00 3.50
3115 4311 9.117183 GATACACCTTATAAATCGGAAAACCTT 57.883 33.333 0.00 0.00 0.00 3.50
3116 4312 7.153217 ACACCTTATAAATCGGAAAACCTTG 57.847 36.000 0.00 0.00 0.00 3.61
3117 4313 6.152154 ACACCTTATAAATCGGAAAACCTTGG 59.848 38.462 0.00 0.00 0.00 3.61
3118 4314 6.152154 CACCTTATAAATCGGAAAACCTTGGT 59.848 38.462 0.00 0.00 0.00 3.67
3119 4315 6.152154 ACCTTATAAATCGGAAAACCTTGGTG 59.848 38.462 0.00 0.00 0.00 4.17
3120 4316 6.152154 CCTTATAAATCGGAAAACCTTGGTGT 59.848 38.462 0.00 0.00 0.00 4.16
3121 4317 3.726291 AAATCGGAAAACCTTGGTGTG 57.274 42.857 0.00 0.00 0.00 3.82
3122 4318 1.616159 ATCGGAAAACCTTGGTGTGG 58.384 50.000 0.00 0.00 0.00 4.17
3123 4319 0.256464 TCGGAAAACCTTGGTGTGGT 59.744 50.000 0.00 0.00 39.91 4.16
3124 4320 0.666374 CGGAAAACCTTGGTGTGGTC 59.334 55.000 0.00 0.00 36.69 4.02
3125 4321 1.770294 GGAAAACCTTGGTGTGGTCA 58.230 50.000 0.00 0.00 36.69 4.02
3126 4322 2.104170 GGAAAACCTTGGTGTGGTCAA 58.896 47.619 0.00 0.00 36.69 3.18
3127 4323 2.159156 GGAAAACCTTGGTGTGGTCAAC 60.159 50.000 0.00 0.00 36.69 3.18
3128 4324 2.525105 AAACCTTGGTGTGGTCAACT 57.475 45.000 0.00 0.00 36.69 3.16
3129 4325 2.525105 AACCTTGGTGTGGTCAACTT 57.475 45.000 0.00 0.00 36.69 2.66
3130 4326 2.525105 ACCTTGGTGTGGTCAACTTT 57.475 45.000 0.00 0.00 31.03 2.66
3131 4327 2.099405 ACCTTGGTGTGGTCAACTTTG 58.901 47.619 0.00 0.00 31.03 2.77
3132 4328 2.291282 ACCTTGGTGTGGTCAACTTTGA 60.291 45.455 0.00 0.00 31.03 2.69
3133 4329 2.958355 CCTTGGTGTGGTCAACTTTGAT 59.042 45.455 0.00 0.00 39.73 2.57
3134 4330 4.141287 CCTTGGTGTGGTCAACTTTGATA 58.859 43.478 0.00 0.00 39.73 2.15
3135 4331 4.766891 CCTTGGTGTGGTCAACTTTGATAT 59.233 41.667 0.00 0.00 39.73 1.63
3136 4332 5.943416 CCTTGGTGTGGTCAACTTTGATATA 59.057 40.000 0.00 0.00 39.73 0.86
3137 4333 6.603201 CCTTGGTGTGGTCAACTTTGATATAT 59.397 38.462 0.00 0.00 39.73 0.86
3138 4334 7.122650 CCTTGGTGTGGTCAACTTTGATATATT 59.877 37.037 0.00 0.00 39.73 1.28
3139 4335 7.389803 TGGTGTGGTCAACTTTGATATATTG 57.610 36.000 0.00 0.00 39.73 1.90
3140 4336 6.127758 TGGTGTGGTCAACTTTGATATATTGC 60.128 38.462 0.00 0.00 39.73 3.56
3141 4337 6.095440 GGTGTGGTCAACTTTGATATATTGCT 59.905 38.462 0.00 0.00 39.73 3.91
3142 4338 7.282224 GGTGTGGTCAACTTTGATATATTGCTA 59.718 37.037 0.00 0.00 39.73 3.49
3143 4339 8.673711 GTGTGGTCAACTTTGATATATTGCTAA 58.326 33.333 0.00 0.00 39.73 3.09
3144 4340 9.237187 TGTGGTCAACTTTGATATATTGCTAAA 57.763 29.630 0.00 0.00 39.73 1.85
3156 4352 9.098355 TGATATATTGCTAAAATAGTCGATGGC 57.902 33.333 0.00 0.00 0.00 4.40
3180 4376 8.467598 GGCGAAGTGTATCATCTTTATAGGATA 58.532 37.037 0.00 0.00 0.00 2.59
3184 4380 9.615660 AAGTGTATCATCTTTATAGGATACCCA 57.384 33.333 0.00 0.00 40.71 4.51
3198 4394 4.968719 AGGATACCCAAGATATGTGTCACA 59.031 41.667 8.40 8.40 33.88 3.58
3223 4419 3.875727 CCAGAATGAGTATGCTCCACAAG 59.124 47.826 8.45 0.00 39.69 3.16
3232 4428 6.070824 TGAGTATGCTCCACAAGAGTAAATCA 60.071 38.462 8.45 0.00 45.21 2.57
3243 4439 7.602644 CCACAAGAGTAAATCACAGTAGCTTTA 59.397 37.037 0.00 0.00 0.00 1.85
3286 4483 5.665916 AGGGATCAAAACTTAATTGCAGG 57.334 39.130 0.00 0.00 0.00 4.85
3287 4484 4.467438 AGGGATCAAAACTTAATTGCAGGG 59.533 41.667 0.00 0.00 0.00 4.45
3355 4554 4.148079 TCTGGTCATGATGTAGAGCCTAG 58.852 47.826 0.00 0.00 0.00 3.02
3378 4577 4.037446 GGCTTCCAACTGTGTTATGTTTCA 59.963 41.667 0.00 0.00 0.00 2.69
3379 4578 5.451242 GGCTTCCAACTGTGTTATGTTTCAA 60.451 40.000 0.00 0.00 0.00 2.69
3427 4626 9.072294 GGTGATTCTTAATTATTTCCAAACACG 57.928 33.333 0.00 0.00 0.00 4.49
3434 4633 4.839668 TTATTTCCAAACACGGGTCTTG 57.160 40.909 0.00 0.00 0.00 3.02
3518 4719 1.782028 AACAGCGTGCCGGAAACTTC 61.782 55.000 5.05 0.00 0.00 3.01
3752 4953 1.940242 ATCACCCATGCTCCATGCCA 61.940 55.000 0.00 0.00 40.20 4.92
3801 5002 8.222637 TCATAGGCTCATTACCAGTAGTAGTTA 58.777 37.037 0.00 0.00 30.92 2.24
3802 5003 6.712179 AGGCTCATTACCAGTAGTAGTTAC 57.288 41.667 0.00 0.00 30.92 2.50
3803 5004 6.433441 AGGCTCATTACCAGTAGTAGTTACT 58.567 40.000 0.00 0.00 43.46 2.24
3804 5005 6.546772 AGGCTCATTACCAGTAGTAGTTACTC 59.453 42.308 0.00 0.00 40.68 2.59
3809 5010 9.964354 TCATTACCAGTAGTAGTTACTCACTTA 57.036 33.333 0.00 0.00 40.68 2.24
3848 5049 3.075148 GCCTCTCTAACGCTTTCCTTTT 58.925 45.455 0.00 0.00 0.00 2.27
4113 5395 8.387813 AGGATTAGAATACCTGTGGTACAAAAA 58.612 33.333 0.00 0.00 44.16 1.94
4128 5410 7.167468 GTGGTACAAAAATATTCATCCGAATGC 59.833 37.037 0.00 0.00 44.16 3.56
4130 5412 5.600696 ACAAAAATATTCATCCGAATGCCC 58.399 37.500 0.00 0.00 42.00 5.36
4162 5445 1.135046 CTATCCTGATTGAGTGCGCG 58.865 55.000 0.00 0.00 0.00 6.86
4171 5507 2.293677 TTGAGTGCGCGAAGTGATAT 57.706 45.000 12.10 0.00 43.07 1.63
4207 5543 4.932200 GGAATATGACCTGGATAAAGCTCG 59.068 45.833 0.00 0.00 0.00 5.03
4247 5583 3.272439 TCAGCTTTTGAGCAAATGTCG 57.728 42.857 9.60 3.42 37.25 4.35
4250 5586 1.701704 CTTTTGAGCAAATGTCGGGC 58.298 50.000 0.00 0.00 0.00 6.13
4263 5599 1.072489 TGTCGGGCCTTGTTATGAACA 59.928 47.619 0.84 0.00 40.21 3.18
4285 5621 7.161773 ACATCCATAAAAGTGAATTGTCCTG 57.838 36.000 0.00 0.00 0.00 3.86
4286 5622 6.721208 ACATCCATAAAAGTGAATTGTCCTGT 59.279 34.615 0.00 0.00 0.00 4.00
4289 5625 7.432869 TCCATAAAAGTGAATTGTCCTGTTTG 58.567 34.615 0.00 0.00 0.00 2.93
4334 5670 5.147162 GCTAAATACGCTGACATATTTGGC 58.853 41.667 10.64 10.64 43.45 4.52
4342 5678 3.316029 GCTGACATATTTGGCTGTGCATA 59.684 43.478 0.00 0.00 32.61 3.14
4354 5690 3.445096 GGCTGTGCATAAGGTCAATTCTT 59.555 43.478 0.00 0.00 0.00 2.52
4402 5738 9.603298 CATTCATTATCAACATCTCATAAACCG 57.397 33.333 0.00 0.00 0.00 4.44
4403 5739 7.728847 TCATTATCAACATCTCATAAACCGG 57.271 36.000 0.00 0.00 0.00 5.28
4404 5740 7.505258 TCATTATCAACATCTCATAAACCGGA 58.495 34.615 9.46 0.00 0.00 5.14
4405 5741 7.657354 TCATTATCAACATCTCATAAACCGGAG 59.343 37.037 9.46 0.00 0.00 4.63
4406 5742 4.819105 TCAACATCTCATAAACCGGAGT 57.181 40.909 9.46 0.00 32.93 3.85
4407 5743 5.925506 TCAACATCTCATAAACCGGAGTA 57.074 39.130 9.46 0.00 32.93 2.59
4408 5744 5.902681 TCAACATCTCATAAACCGGAGTAG 58.097 41.667 9.46 0.00 32.93 2.57
4409 5745 5.655090 TCAACATCTCATAAACCGGAGTAGA 59.345 40.000 9.46 2.10 32.93 2.59
4410 5746 6.323996 TCAACATCTCATAAACCGGAGTAGAT 59.676 38.462 9.46 4.59 32.93 1.98
4411 5747 7.504574 TCAACATCTCATAAACCGGAGTAGATA 59.495 37.037 9.46 0.00 32.93 1.98
4412 5748 7.216973 ACATCTCATAAACCGGAGTAGATAC 57.783 40.000 9.46 0.00 32.93 2.24
4413 5749 6.776116 ACATCTCATAAACCGGAGTAGATACA 59.224 38.462 9.46 0.00 32.93 2.29
4414 5750 7.451877 ACATCTCATAAACCGGAGTAGATACAT 59.548 37.037 9.46 0.00 32.93 2.29
4415 5751 7.215719 TCTCATAAACCGGAGTAGATACATG 57.784 40.000 9.46 0.00 32.93 3.21
4416 5752 6.776116 TCTCATAAACCGGAGTAGATACATGT 59.224 38.462 9.46 2.69 32.93 3.21
4417 5753 7.940688 TCTCATAAACCGGAGTAGATACATGTA 59.059 37.037 9.46 8.27 32.93 2.29
4418 5754 7.879070 TCATAAACCGGAGTAGATACATGTAC 58.121 38.462 9.46 0.00 0.00 2.90
4419 5755 7.503230 TCATAAACCGGAGTAGATACATGTACA 59.497 37.037 9.46 0.00 0.00 2.90
4420 5756 6.534475 AAACCGGAGTAGATACATGTACAA 57.466 37.500 9.46 0.00 0.00 2.41
4421 5757 6.534475 AACCGGAGTAGATACATGTACAAA 57.466 37.500 9.46 0.00 0.00 2.83
4422 5758 6.534475 ACCGGAGTAGATACATGTACAAAA 57.466 37.500 9.46 0.00 0.00 2.44
4423 5759 6.570692 ACCGGAGTAGATACATGTACAAAAG 58.429 40.000 9.46 0.00 0.00 2.27
4424 5760 6.154021 ACCGGAGTAGATACATGTACAAAAGT 59.846 38.462 9.46 1.75 0.00 2.66
4425 5761 6.475727 CCGGAGTAGATACATGTACAAAAGTG 59.524 42.308 7.96 0.00 0.00 3.16
4426 5762 6.019801 CGGAGTAGATACATGTACAAAAGTGC 60.020 42.308 7.96 2.24 0.00 4.40
4427 5763 7.042335 GGAGTAGATACATGTACAAAAGTGCT 58.958 38.462 7.96 4.66 0.00 4.40
4428 5764 7.549488 GGAGTAGATACATGTACAAAAGTGCTT 59.451 37.037 7.96 0.00 0.00 3.91
4429 5765 9.582431 GAGTAGATACATGTACAAAAGTGCTTA 57.418 33.333 7.96 0.00 0.00 3.09
4430 5766 9.587772 AGTAGATACATGTACAAAAGTGCTTAG 57.412 33.333 7.96 0.00 0.00 2.18
4431 5767 9.582431 GTAGATACATGTACAAAAGTGCTTAGA 57.418 33.333 7.96 0.00 0.00 2.10
4432 5768 8.709386 AGATACATGTACAAAAGTGCTTAGAG 57.291 34.615 7.96 0.00 0.00 2.43
4433 5769 8.531982 AGATACATGTACAAAAGTGCTTAGAGA 58.468 33.333 7.96 0.00 0.00 3.10
4434 5770 9.151471 GATACATGTACAAAAGTGCTTAGAGAA 57.849 33.333 7.96 0.00 0.00 2.87
4435 5771 7.801716 ACATGTACAAAAGTGCTTAGAGAAA 57.198 32.000 0.00 0.00 0.00 2.52
4436 5772 7.639945 ACATGTACAAAAGTGCTTAGAGAAAC 58.360 34.615 0.00 0.00 0.00 2.78
4437 5773 6.281848 TGTACAAAAGTGCTTAGAGAAACG 57.718 37.500 0.00 0.00 0.00 3.60
4438 5774 4.813296 ACAAAAGTGCTTAGAGAAACGG 57.187 40.909 0.00 0.00 0.00 4.44
4439 5775 4.196971 ACAAAAGTGCTTAGAGAAACGGT 58.803 39.130 0.00 0.00 0.00 4.83
4440 5776 4.638865 ACAAAAGTGCTTAGAGAAACGGTT 59.361 37.500 0.00 0.00 0.00 4.44
4441 5777 4.813296 AAAGTGCTTAGAGAAACGGTTG 57.187 40.909 0.00 0.00 0.00 3.77
4442 5778 3.746045 AGTGCTTAGAGAAACGGTTGA 57.254 42.857 0.00 0.00 0.00 3.18
4443 5779 3.654414 AGTGCTTAGAGAAACGGTTGAG 58.346 45.455 0.00 0.00 0.00 3.02
4444 5780 2.157863 GTGCTTAGAGAAACGGTTGAGC 59.842 50.000 0.00 0.00 0.00 4.26
4445 5781 2.224185 TGCTTAGAGAAACGGTTGAGCA 60.224 45.455 0.00 0.00 36.63 4.26
4446 5782 2.806244 GCTTAGAGAAACGGTTGAGCAA 59.194 45.455 0.00 0.00 0.00 3.91
4447 5783 3.437049 GCTTAGAGAAACGGTTGAGCAAT 59.563 43.478 0.00 0.00 0.00 3.56
4448 5784 4.083271 GCTTAGAGAAACGGTTGAGCAATT 60.083 41.667 0.00 0.00 0.00 2.32
4449 5785 3.904136 AGAGAAACGGTTGAGCAATTG 57.096 42.857 0.00 0.00 0.00 2.32
4450 5786 2.554032 AGAGAAACGGTTGAGCAATTGG 59.446 45.455 7.72 0.00 0.00 3.16
4451 5787 2.552315 GAGAAACGGTTGAGCAATTGGA 59.448 45.455 7.72 0.00 0.00 3.53
4452 5788 2.955660 AGAAACGGTTGAGCAATTGGAA 59.044 40.909 7.72 0.00 0.00 3.53
4453 5789 3.383185 AGAAACGGTTGAGCAATTGGAAA 59.617 39.130 7.72 0.00 0.00 3.13
4454 5790 3.369546 AACGGTTGAGCAATTGGAAAG 57.630 42.857 7.72 0.00 0.00 2.62
4455 5791 1.613437 ACGGTTGAGCAATTGGAAAGG 59.387 47.619 7.72 0.00 0.00 3.11
4456 5792 1.669795 CGGTTGAGCAATTGGAAAGGC 60.670 52.381 7.72 0.00 0.00 4.35
4457 5793 1.344114 GGTTGAGCAATTGGAAAGGCA 59.656 47.619 7.72 0.00 33.08 4.75
4458 5794 2.224257 GGTTGAGCAATTGGAAAGGCAA 60.224 45.455 7.72 0.00 33.08 4.52
4459 5795 3.062042 GTTGAGCAATTGGAAAGGCAAG 58.938 45.455 7.72 0.00 33.08 4.01
4460 5796 2.318908 TGAGCAATTGGAAAGGCAAGT 58.681 42.857 7.72 0.00 33.08 3.16
4461 5797 2.699846 TGAGCAATTGGAAAGGCAAGTT 59.300 40.909 7.72 0.00 33.08 2.66
4462 5798 3.062042 GAGCAATTGGAAAGGCAAGTTG 58.938 45.455 7.72 0.00 33.08 3.16
4463 5799 2.435437 AGCAATTGGAAAGGCAAGTTGT 59.565 40.909 7.72 0.00 33.08 3.32
4464 5800 3.118298 AGCAATTGGAAAGGCAAGTTGTT 60.118 39.130 7.72 0.00 33.08 2.83
4465 5801 3.627123 GCAATTGGAAAGGCAAGTTGTTT 59.373 39.130 7.72 0.00 31.25 2.83
4466 5802 4.260743 GCAATTGGAAAGGCAAGTTGTTTC 60.261 41.667 7.72 7.47 31.25 2.78
4467 5803 5.118286 CAATTGGAAAGGCAAGTTGTTTCT 58.882 37.500 14.92 4.87 31.96 2.52
4468 5804 4.385358 TTGGAAAGGCAAGTTGTTTCTC 57.615 40.909 14.92 8.58 31.96 2.87
4469 5805 3.360867 TGGAAAGGCAAGTTGTTTCTCA 58.639 40.909 14.92 10.32 31.96 3.27
4470 5806 3.960102 TGGAAAGGCAAGTTGTTTCTCAT 59.040 39.130 14.92 1.99 31.96 2.90
4471 5807 4.405358 TGGAAAGGCAAGTTGTTTCTCATT 59.595 37.500 14.92 0.00 31.96 2.57
4472 5808 4.746611 GGAAAGGCAAGTTGTTTCTCATTG 59.253 41.667 14.92 0.00 31.96 2.82
4473 5809 4.326504 AAGGCAAGTTGTTTCTCATTGG 57.673 40.909 4.48 0.00 0.00 3.16
4474 5810 3.565307 AGGCAAGTTGTTTCTCATTGGA 58.435 40.909 4.48 0.00 0.00 3.53
4475 5811 3.571401 AGGCAAGTTGTTTCTCATTGGAG 59.429 43.478 4.48 0.00 42.80 3.86
4476 5812 3.305608 GGCAAGTTGTTTCTCATTGGAGG 60.306 47.826 4.48 0.00 41.69 4.30
4477 5813 3.569701 GCAAGTTGTTTCTCATTGGAGGA 59.430 43.478 4.48 0.00 41.69 3.71
4478 5814 4.557496 GCAAGTTGTTTCTCATTGGAGGAC 60.557 45.833 4.48 0.00 41.69 3.85
4479 5815 4.437682 AGTTGTTTCTCATTGGAGGACA 57.562 40.909 0.00 0.00 41.69 4.02
4480 5816 4.792068 AGTTGTTTCTCATTGGAGGACAA 58.208 39.130 9.10 9.10 41.20 3.18
4493 5829 6.914654 TTGGAGGACAATTGATTTTGATCA 57.085 33.333 13.59 0.00 33.18 2.92
4494 5830 6.914654 TGGAGGACAATTGATTTTGATCAA 57.085 33.333 13.59 3.38 43.72 2.57
4495 5831 6.927416 TGGAGGACAATTGATTTTGATCAAG 58.073 36.000 13.59 0.00 42.96 3.02
4496 5832 6.494491 TGGAGGACAATTGATTTTGATCAAGT 59.506 34.615 13.59 1.61 42.96 3.16
4497 5833 7.031975 GGAGGACAATTGATTTTGATCAAGTC 58.968 38.462 13.59 11.34 42.96 3.01
4498 5834 7.094032 GGAGGACAATTGATTTTGATCAAGTCT 60.094 37.037 13.59 5.63 42.96 3.24
4499 5835 8.868522 AGGACAATTGATTTTGATCAAGTCTA 57.131 30.769 13.59 13.53 42.96 2.59
4500 5836 9.471702 AGGACAATTGATTTTGATCAAGTCTAT 57.528 29.630 13.59 14.72 42.96 1.98
4501 5837 9.727627 GGACAATTGATTTTGATCAAGTCTATC 57.272 33.333 13.59 14.88 42.96 2.08
4502 5838 9.727627 GACAATTGATTTTGATCAAGTCTATCC 57.272 33.333 13.59 9.45 42.96 2.59
4503 5839 9.471702 ACAATTGATTTTGATCAAGTCTATCCT 57.528 29.630 13.59 5.63 42.96 3.24
4504 5840 9.947669 CAATTGATTTTGATCAAGTCTATCCTC 57.052 33.333 18.18 6.59 42.96 3.71
4505 5841 7.776933 TTGATTTTGATCAAGTCTATCCTCG 57.223 36.000 18.18 0.00 35.80 4.63
4506 5842 6.283694 TGATTTTGATCAAGTCTATCCTCGG 58.716 40.000 18.18 0.00 0.00 4.63
4507 5843 5.677319 TTTTGATCAAGTCTATCCTCGGT 57.323 39.130 8.41 0.00 0.00 4.69
4508 5844 5.677319 TTTGATCAAGTCTATCCTCGGTT 57.323 39.130 8.41 0.00 0.00 4.44
4509 5845 4.920640 TGATCAAGTCTATCCTCGGTTC 57.079 45.455 0.00 0.00 0.00 3.62
4510 5846 4.537751 TGATCAAGTCTATCCTCGGTTCT 58.462 43.478 0.00 0.00 0.00 3.01
4511 5847 4.580995 TGATCAAGTCTATCCTCGGTTCTC 59.419 45.833 0.00 0.00 0.00 2.87
4512 5848 4.237976 TCAAGTCTATCCTCGGTTCTCT 57.762 45.455 0.00 0.00 0.00 3.10
4513 5849 5.369409 TCAAGTCTATCCTCGGTTCTCTA 57.631 43.478 0.00 0.00 0.00 2.43
4514 5850 5.942961 TCAAGTCTATCCTCGGTTCTCTAT 58.057 41.667 0.00 0.00 0.00 1.98
4515 5851 7.075851 TCAAGTCTATCCTCGGTTCTCTATA 57.924 40.000 0.00 0.00 0.00 1.31
4516 5852 7.691213 TCAAGTCTATCCTCGGTTCTCTATAT 58.309 38.462 0.00 0.00 0.00 0.86
4517 5853 7.608376 TCAAGTCTATCCTCGGTTCTCTATATG 59.392 40.741 0.00 0.00 0.00 1.78
4518 5854 5.883673 AGTCTATCCTCGGTTCTCTATATGC 59.116 44.000 0.00 0.00 0.00 3.14
4519 5855 5.883673 GTCTATCCTCGGTTCTCTATATGCT 59.116 44.000 0.00 0.00 0.00 3.79
4520 5856 6.037830 GTCTATCCTCGGTTCTCTATATGCTC 59.962 46.154 0.00 0.00 0.00 4.26
4521 5857 4.374689 TCCTCGGTTCTCTATATGCTCT 57.625 45.455 0.00 0.00 0.00 4.09
4522 5858 4.328536 TCCTCGGTTCTCTATATGCTCTC 58.671 47.826 0.00 0.00 0.00 3.20
4523 5859 3.442273 CCTCGGTTCTCTATATGCTCTCC 59.558 52.174 0.00 0.00 0.00 3.71
4524 5860 4.331968 CTCGGTTCTCTATATGCTCTCCT 58.668 47.826 0.00 0.00 0.00 3.69
4525 5861 4.730966 TCGGTTCTCTATATGCTCTCCTT 58.269 43.478 0.00 0.00 0.00 3.36
4526 5862 5.141182 TCGGTTCTCTATATGCTCTCCTTT 58.859 41.667 0.00 0.00 0.00 3.11
4527 5863 5.241949 TCGGTTCTCTATATGCTCTCCTTTC 59.758 44.000 0.00 0.00 0.00 2.62
4528 5864 5.010112 CGGTTCTCTATATGCTCTCCTTTCA 59.990 44.000 0.00 0.00 0.00 2.69
4529 5865 6.461648 CGGTTCTCTATATGCTCTCCTTTCAA 60.462 42.308 0.00 0.00 0.00 2.69
4530 5866 7.449247 GGTTCTCTATATGCTCTCCTTTCAAT 58.551 38.462 0.00 0.00 0.00 2.57
4531 5867 7.936301 GGTTCTCTATATGCTCTCCTTTCAATT 59.064 37.037 0.00 0.00 0.00 2.32
4532 5868 8.987890 GTTCTCTATATGCTCTCCTTTCAATTC 58.012 37.037 0.00 0.00 0.00 2.17
4533 5869 7.675062 TCTCTATATGCTCTCCTTTCAATTCC 58.325 38.462 0.00 0.00 0.00 3.01
4534 5870 6.773638 TCTATATGCTCTCCTTTCAATTCCC 58.226 40.000 0.00 0.00 0.00 3.97
4535 5871 3.744940 ATGCTCTCCTTTCAATTCCCA 57.255 42.857 0.00 0.00 0.00 4.37
4536 5872 3.524095 TGCTCTCCTTTCAATTCCCAA 57.476 42.857 0.00 0.00 0.00 4.12
4537 5873 3.843422 TGCTCTCCTTTCAATTCCCAAA 58.157 40.909 0.00 0.00 0.00 3.28
4538 5874 4.222336 TGCTCTCCTTTCAATTCCCAAAA 58.778 39.130 0.00 0.00 0.00 2.44
4539 5875 4.281688 TGCTCTCCTTTCAATTCCCAAAAG 59.718 41.667 0.00 0.00 0.00 2.27
4540 5876 4.524328 GCTCTCCTTTCAATTCCCAAAAGA 59.476 41.667 0.00 0.00 32.89 2.52
4541 5877 5.336293 GCTCTCCTTTCAATTCCCAAAAGAG 60.336 44.000 0.00 0.00 32.89 2.85
4542 5878 5.079643 TCTCCTTTCAATTCCCAAAAGAGG 58.920 41.667 0.00 0.00 32.89 3.69
4543 5879 3.578282 TCCTTTCAATTCCCAAAAGAGGC 59.422 43.478 0.00 0.00 32.89 4.70
4544 5880 3.306989 CCTTTCAATTCCCAAAAGAGGCC 60.307 47.826 0.00 0.00 32.89 5.19
4545 5881 1.937191 TCAATTCCCAAAAGAGGCCC 58.063 50.000 0.00 0.00 0.00 5.80
4546 5882 1.432807 TCAATTCCCAAAAGAGGCCCT 59.567 47.619 0.00 0.00 0.00 5.19
4547 5883 1.551883 CAATTCCCAAAAGAGGCCCTG 59.448 52.381 0.00 0.00 0.00 4.45
4548 5884 0.615827 ATTCCCAAAAGAGGCCCTGC 60.616 55.000 0.00 0.00 0.00 4.85
4549 5885 2.017668 TTCCCAAAAGAGGCCCTGCA 62.018 55.000 0.00 0.00 0.00 4.41
4550 5886 1.533753 CCCAAAAGAGGCCCTGCAA 60.534 57.895 0.00 0.00 0.00 4.08
4551 5887 1.120795 CCCAAAAGAGGCCCTGCAAA 61.121 55.000 0.00 0.00 0.00 3.68
4552 5888 0.319405 CCAAAAGAGGCCCTGCAAAG 59.681 55.000 0.00 0.00 0.00 2.77
4553 5889 0.319405 CAAAAGAGGCCCTGCAAAGG 59.681 55.000 0.00 0.00 0.00 3.11
4566 5902 4.724074 CTGCAAAGGCTGGATTATTTCA 57.276 40.909 0.00 0.00 41.91 2.69
4567 5903 5.075858 CTGCAAAGGCTGGATTATTTCAA 57.924 39.130 0.00 0.00 41.91 2.69
4568 5904 5.480642 TGCAAAGGCTGGATTATTTCAAA 57.519 34.783 0.00 0.00 41.91 2.69
4569 5905 6.052405 TGCAAAGGCTGGATTATTTCAAAT 57.948 33.333 0.00 0.00 41.91 2.32
4570 5906 6.474630 TGCAAAGGCTGGATTATTTCAAATT 58.525 32.000 0.00 0.00 41.91 1.82
4571 5907 6.594937 TGCAAAGGCTGGATTATTTCAAATTC 59.405 34.615 0.00 0.00 41.91 2.17
4572 5908 6.594937 GCAAAGGCTGGATTATTTCAAATTCA 59.405 34.615 0.00 0.00 36.96 2.57
4573 5909 7.201582 GCAAAGGCTGGATTATTTCAAATTCAG 60.202 37.037 0.00 1.26 42.95 3.02
4574 5910 7.722949 AAGGCTGGATTATTTCAAATTCAGA 57.277 32.000 8.70 0.00 42.78 3.27
4575 5911 7.909485 AGGCTGGATTATTTCAAATTCAGAT 57.091 32.000 8.70 0.00 42.78 2.90
4576 5912 8.315220 AGGCTGGATTATTTCAAATTCAGATT 57.685 30.769 8.70 0.00 42.78 2.40
4577 5913 8.419442 AGGCTGGATTATTTCAAATTCAGATTC 58.581 33.333 8.70 0.00 42.78 2.52
4578 5914 7.654923 GGCTGGATTATTTCAAATTCAGATTCC 59.345 37.037 8.70 0.00 42.78 3.01
4579 5915 8.419442 GCTGGATTATTTCAAATTCAGATTCCT 58.581 33.333 8.70 0.00 42.78 3.36
4582 5918 9.455847 GGATTATTTCAAATTCAGATTCCTTCG 57.544 33.333 0.00 0.00 0.00 3.79
4583 5919 9.455847 GATTATTTCAAATTCAGATTCCTTCGG 57.544 33.333 0.00 0.00 0.00 4.30
4584 5920 4.701956 TTCAAATTCAGATTCCTTCGGC 57.298 40.909 0.00 0.00 0.00 5.54
4585 5921 2.677836 TCAAATTCAGATTCCTTCGGCG 59.322 45.455 0.00 0.00 0.00 6.46
4586 5922 2.677836 CAAATTCAGATTCCTTCGGCGA 59.322 45.455 4.99 4.99 0.00 5.54
4587 5923 2.691409 ATTCAGATTCCTTCGGCGAA 57.309 45.000 22.33 22.33 0.00 4.70
4588 5924 2.010145 TTCAGATTCCTTCGGCGAAG 57.990 50.000 35.97 35.97 39.17 3.79
4589 5925 1.182667 TCAGATTCCTTCGGCGAAGA 58.817 50.000 41.98 27.94 41.71 2.87
4590 5926 1.135139 TCAGATTCCTTCGGCGAAGAG 59.865 52.381 41.98 31.91 41.71 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
182 192 4.862823 GGAGGACGGGGAGGAGGG 62.863 77.778 0.00 0.00 0.00 4.30
302 312 2.025981 TCCACATGAATGTCTTCAGGGG 60.026 50.000 0.00 0.71 45.21 4.79
694 727 2.503375 CCGTCCCGTTTCGTCTCG 60.503 66.667 0.00 0.00 0.00 4.04
698 731 4.238654 TTGGCCGTCCCGTTTCGT 62.239 61.111 0.00 0.00 35.87 3.85
699 732 3.419759 CTTGGCCGTCCCGTTTCG 61.420 66.667 0.00 0.00 35.87 3.46
700 733 3.733960 GCTTGGCCGTCCCGTTTC 61.734 66.667 0.00 0.00 35.87 2.78
701 734 4.265056 AGCTTGGCCGTCCCGTTT 62.265 61.111 0.00 0.00 35.87 3.60
822 858 1.434622 CTCCTGGACATGTGATGCGC 61.435 60.000 1.15 0.00 0.00 6.09
831 867 1.771255 GATAACTGGGCTCCTGGACAT 59.229 52.381 0.00 0.00 0.00 3.06
832 868 1.204146 GATAACTGGGCTCCTGGACA 58.796 55.000 0.00 0.00 0.00 4.02
853 896 3.083349 CCAGATGGTCTCGGGCCA 61.083 66.667 4.39 0.80 40.68 5.36
868 916 3.118038 AGAGAATTAATGCTTACGGGCCA 60.118 43.478 4.39 0.00 0.00 5.36
1188 1254 3.653836 TCTCAGTTTAAGGGGGTAAGCAA 59.346 43.478 0.00 0.00 0.00 3.91
1194 1260 2.435203 ACCTCTCAGTTTAAGGGGGT 57.565 50.000 0.00 0.00 38.85 4.95
1199 1274 5.859495 AGACCAGAAACCTCTCAGTTTAAG 58.141 41.667 0.00 0.00 40.01 1.85
1224 1299 2.022625 TCCATCCTCTGGGTTGAGAGAT 60.023 50.000 0.00 0.00 45.98 2.75
1287 1457 1.585521 GGCATCGTACACGTCGAGG 60.586 63.158 3.03 3.03 40.57 4.63
1369 1540 0.249238 GCATCGCAAACACAAACCCA 60.249 50.000 0.00 0.00 0.00 4.51
1394 1565 4.338118 CCCATCCTAACGTGCAACAAATAT 59.662 41.667 0.00 0.00 35.74 1.28
1488 1873 9.233232 CTAACAGTAACCAAAACAAAAGATCAC 57.767 33.333 0.00 0.00 0.00 3.06
1490 1875 9.233232 CACTAACAGTAACCAAAACAAAAGATC 57.767 33.333 0.00 0.00 0.00 2.75
1535 2093 0.469494 TTTCAGCAGTCAGTCAGCCA 59.531 50.000 0.00 0.00 0.00 4.75
1545 2104 3.228188 TGAACCTGGATTTTCAGCAGT 57.772 42.857 0.00 0.00 33.64 4.40
1579 2144 0.381801 GGCAATTGGTGACCATAGCG 59.618 55.000 4.56 0.00 31.53 4.26
1663 2228 2.743718 CTGCCTGAACCGGACTGT 59.256 61.111 9.46 0.00 0.00 3.55
1694 2259 1.711206 GCCCGGTCGATTATTCTAGC 58.289 55.000 0.00 0.00 0.00 3.42
1718 2283 2.768492 CCGCAAATCCCAGCAGAGC 61.768 63.158 0.00 0.00 0.00 4.09
1735 2300 0.914417 TGTCCTGGACATTCCCCTCC 60.914 60.000 25.12 0.00 37.67 4.30
1754 2319 1.135139 CACCAGATCGAACTCGGATGT 59.865 52.381 14.83 0.00 40.29 3.06
1756 2321 1.475403 ACACCAGATCGAACTCGGAT 58.525 50.000 14.83 3.79 40.29 4.18
1762 2327 1.601903 TGCACAAACACCAGATCGAAC 59.398 47.619 0.00 0.00 0.00 3.95
1805 2370 1.114627 CCTAATTTCCCCAGCTTGCC 58.885 55.000 0.00 0.00 0.00 4.52
1925 2490 3.749665 AGCAGATCCATAGCTCAAGAC 57.250 47.619 0.00 0.00 32.05 3.01
2046 2611 4.003648 GACATCATCCAACGTCTTTCCTT 58.996 43.478 0.00 0.00 0.00 3.36
2106 2672 6.619801 AGGTTGTACTTCAAAACATCTGTC 57.380 37.500 0.00 0.00 37.81 3.51
2123 2689 8.088365 GGAGCATTTTTCTGTAATAAAGGTTGT 58.912 33.333 0.00 0.00 0.00 3.32
2127 2693 9.143631 CAAAGGAGCATTTTTCTGTAATAAAGG 57.856 33.333 0.00 0.00 0.00 3.11
2135 2701 3.308401 ACCCAAAGGAGCATTTTTCTGT 58.692 40.909 0.00 0.00 36.73 3.41
2200 2767 9.167311 GACTGGAGATGACAAACAAGTTATATT 57.833 33.333 0.00 0.00 0.00 1.28
2208 2775 8.408043 AAATATTGACTGGAGATGACAAACAA 57.592 30.769 0.00 0.00 0.00 2.83
2219 2786 7.277760 TGTCATACAACGAAATATTGACTGGAG 59.722 37.037 0.00 0.00 0.00 3.86
2236 2803 4.637091 CCATTGCAGAGTCATGTCATACAA 59.363 41.667 0.00 0.00 0.00 2.41
2241 2808 1.003928 AGCCATTGCAGAGTCATGTCA 59.996 47.619 0.00 0.00 41.13 3.58
2242 2809 1.669779 GAGCCATTGCAGAGTCATGTC 59.330 52.381 0.00 0.00 41.13 3.06
2244 2811 0.656259 CGAGCCATTGCAGAGTCATG 59.344 55.000 0.00 0.00 41.13 3.07
2264 2831 4.454678 TGAGATGGCTAATGGTTGTGATC 58.545 43.478 0.00 0.00 0.00 2.92
2299 2867 4.526650 ACTTCACAAAACCAAAAGGTGTCT 59.473 37.500 0.00 0.00 0.00 3.41
2300 2868 4.625311 CACTTCACAAAACCAAAAGGTGTC 59.375 41.667 0.00 0.00 0.00 3.67
2301 2869 4.282195 TCACTTCACAAAACCAAAAGGTGT 59.718 37.500 0.00 0.00 0.00 4.16
2337 2905 5.221441 CCGGTCCTGTCATGTATTAGAATGA 60.221 44.000 0.00 0.00 0.00 2.57
2359 2927 7.045416 AGCATCTACTACATATCTCTAGACCG 58.955 42.308 0.00 0.00 0.00 4.79
2373 2941 8.233868 CACATAGACTGATGTAGCATCTACTAC 58.766 40.741 10.02 0.00 42.41 2.73
2409 2979 5.752472 CCATTGTTGAGTGCATAAAACAACA 59.248 36.000 19.57 18.04 43.19 3.33
2429 3615 6.521162 TCATTGTACTATACATCGCACCATT 58.479 36.000 0.00 0.00 38.68 3.16
2434 3622 5.174943 CGCTTTCATTGTACTATACATCGCA 59.825 40.000 0.00 0.00 38.68 5.10
2437 3625 6.525121 TGCGCTTTCATTGTACTATACATC 57.475 37.500 9.73 0.00 38.68 3.06
2444 3632 3.125829 CACAGATGCGCTTTCATTGTACT 59.874 43.478 9.73 0.00 0.00 2.73
2507 3695 5.944599 GGATGATGATTCCTGCAGAATATGT 59.055 40.000 17.39 0.00 45.52 2.29
2513 3701 2.041701 TCGGATGATGATTCCTGCAGA 58.958 47.619 17.39 0.00 0.00 4.26
2539 3727 2.441717 TTGCTGCCACTGTGCCAA 60.442 55.556 1.29 0.34 0.00 4.52
2553 3741 2.750948 TCAGAACGTGTTACTCCTTGC 58.249 47.619 0.00 0.00 0.00 4.01
2675 3863 4.394920 ACGGGAACAAACTTGCATATGTAG 59.605 41.667 4.29 5.13 0.00 2.74
2676 3864 4.155099 CACGGGAACAAACTTGCATATGTA 59.845 41.667 4.29 0.00 0.00 2.29
2677 3865 3.057596 CACGGGAACAAACTTGCATATGT 60.058 43.478 4.29 0.00 0.00 2.29
2678 3866 3.190327 TCACGGGAACAAACTTGCATATG 59.810 43.478 0.00 0.00 0.00 1.78
2702 3890 7.735326 ATGTACAGAGGGAGTAATAAACAGT 57.265 36.000 0.33 0.00 0.00 3.55
2715 3903 9.760077 AAACGTCTTATATTTATGTACAGAGGG 57.240 33.333 0.33 0.00 0.00 4.30
2732 3920 9.678260 AGTATTCCTAGTCTCTAAAACGTCTTA 57.322 33.333 0.00 0.00 0.00 2.10
2733 3921 8.578448 AGTATTCCTAGTCTCTAAAACGTCTT 57.422 34.615 0.00 0.00 0.00 3.01
2734 3922 8.578448 AAGTATTCCTAGTCTCTAAAACGTCT 57.422 34.615 0.00 0.00 0.00 4.18
2735 3923 9.074443 CAAAGTATTCCTAGTCTCTAAAACGTC 57.926 37.037 0.00 0.00 0.00 4.34
2736 3924 8.583296 ACAAAGTATTCCTAGTCTCTAAAACGT 58.417 33.333 0.00 0.00 0.00 3.99
2737 3925 8.983307 ACAAAGTATTCCTAGTCTCTAAAACG 57.017 34.615 0.00 0.00 0.00 3.60
2743 3931 9.268282 TGGATAAACAAAGTATTCCTAGTCTCT 57.732 33.333 0.00 0.00 0.00 3.10
2744 3932 9.535878 CTGGATAAACAAAGTATTCCTAGTCTC 57.464 37.037 0.00 0.00 0.00 3.36
2745 3933 9.047947 ACTGGATAAACAAAGTATTCCTAGTCT 57.952 33.333 0.00 0.00 0.00 3.24
2746 3934 9.668497 AACTGGATAAACAAAGTATTCCTAGTC 57.332 33.333 0.00 0.00 0.00 2.59
2747 3935 9.449719 CAACTGGATAAACAAAGTATTCCTAGT 57.550 33.333 0.00 0.00 0.00 2.57
2748 3936 9.449719 ACAACTGGATAAACAAAGTATTCCTAG 57.550 33.333 0.00 0.00 0.00 3.02
2749 3937 9.802039 AACAACTGGATAAACAAAGTATTCCTA 57.198 29.630 0.00 0.00 0.00 2.94
2750 3938 8.706322 AACAACTGGATAAACAAAGTATTCCT 57.294 30.769 0.00 0.00 0.00 3.36
2756 3944 9.965824 CATTCTAAACAACTGGATAAACAAAGT 57.034 29.630 0.00 0.00 0.00 2.66
2757 3945 9.410556 CCATTCTAAACAACTGGATAAACAAAG 57.589 33.333 0.00 0.00 0.00 2.77
2758 3946 9.137459 TCCATTCTAAACAACTGGATAAACAAA 57.863 29.630 0.00 0.00 31.19 2.83
2759 3947 8.573035 GTCCATTCTAAACAACTGGATAAACAA 58.427 33.333 0.00 0.00 38.23 2.83
2760 3948 7.721842 TGTCCATTCTAAACAACTGGATAAACA 59.278 33.333 0.00 0.00 38.23 2.83
2761 3949 8.106247 TGTCCATTCTAAACAACTGGATAAAC 57.894 34.615 0.00 0.00 38.23 2.01
2762 3950 8.698973 TTGTCCATTCTAAACAACTGGATAAA 57.301 30.769 0.00 0.00 38.23 1.40
2763 3951 8.573035 GTTTGTCCATTCTAAACAACTGGATAA 58.427 33.333 0.00 0.00 38.23 1.75
2764 3952 7.721842 TGTTTGTCCATTCTAAACAACTGGATA 59.278 33.333 0.00 0.00 40.24 2.59
2765 3953 6.549364 TGTTTGTCCATTCTAAACAACTGGAT 59.451 34.615 0.00 0.00 40.24 3.41
2766 3954 5.888724 TGTTTGTCCATTCTAAACAACTGGA 59.111 36.000 0.00 0.00 40.24 3.86
2767 3955 5.977129 GTGTTTGTCCATTCTAAACAACTGG 59.023 40.000 0.00 0.00 43.43 4.00
2778 3966 3.316308 AGAACTGCAGTGTTTGTCCATTC 59.684 43.478 22.49 9.94 0.00 2.67
2810 3998 2.306847 CTGGCACCAGTACCAAACTTT 58.693 47.619 8.61 0.00 35.76 2.66
2812 4000 0.537371 GCTGGCACCAGTACCAAACT 60.537 55.000 17.72 0.00 45.24 2.66
2813 4001 0.821711 TGCTGGCACCAGTACCAAAC 60.822 55.000 17.72 0.36 45.24 2.93
2814 4002 0.112218 ATGCTGGCACCAGTACCAAA 59.888 50.000 17.72 0.00 45.24 3.28
2816 4004 0.988063 TAATGCTGGCACCAGTACCA 59.012 50.000 17.72 8.09 45.24 3.25
2916 4104 2.814280 ACAGAAACTGTCCACTACCG 57.186 50.000 0.00 0.00 41.21 4.02
2951 4139 8.905660 TGGTGAGTAATAGCTAGTTACTAGAG 57.094 38.462 22.14 0.49 41.21 2.43
2953 4141 8.516234 CCATGGTGAGTAATAGCTAGTTACTAG 58.484 40.741 14.56 14.56 41.21 2.57
2963 4151 0.868406 GCGCCATGGTGAGTAATAGC 59.132 55.000 29.49 4.46 0.00 2.97
2996 4185 4.884164 GCATACCCTACATGCTTCTTCTTT 59.116 41.667 0.00 0.00 44.35 2.52
2998 4187 4.078639 GCATACCCTACATGCTTCTTCT 57.921 45.455 0.00 0.00 44.35 2.85
3006 4195 2.995939 CGTATGCTGCATACCCTACATG 59.004 50.000 34.65 21.12 42.41 3.21
3008 4197 1.270094 GCGTATGCTGCATACCCTACA 60.270 52.381 34.65 10.51 42.41 2.74
3009 4198 1.429463 GCGTATGCTGCATACCCTAC 58.571 55.000 34.65 22.74 42.41 3.18
3010 4199 3.906660 GCGTATGCTGCATACCCTA 57.093 52.632 34.65 11.86 42.41 3.53
3011 4200 4.779475 GCGTATGCTGCATACCCT 57.221 55.556 34.65 11.88 42.41 4.34
3026 4215 0.523968 CCGTGGCATGAAAATGAGCG 60.524 55.000 8.63 0.00 0.00 5.03
3040 4236 4.034048 CGAGGAAATCTTGATAAACCGTGG 59.966 45.833 0.00 0.00 0.00 4.94
3042 4238 4.189231 CCGAGGAAATCTTGATAAACCGT 58.811 43.478 0.00 0.00 0.00 4.83
3043 4239 4.189231 ACCGAGGAAATCTTGATAAACCG 58.811 43.478 0.00 0.00 0.00 4.44
3044 4240 4.270325 CGACCGAGGAAATCTTGATAAACC 59.730 45.833 0.00 0.00 0.00 3.27
3045 4241 5.107133 TCGACCGAGGAAATCTTGATAAAC 58.893 41.667 0.00 0.00 0.00 2.01
3046 4242 5.333299 TCGACCGAGGAAATCTTGATAAA 57.667 39.130 0.00 0.00 0.00 1.40
3047 4243 4.994907 TCGACCGAGGAAATCTTGATAA 57.005 40.909 0.00 0.00 0.00 1.75
3048 4244 4.583073 TGATCGACCGAGGAAATCTTGATA 59.417 41.667 0.00 0.00 0.00 2.15
3049 4245 3.384789 TGATCGACCGAGGAAATCTTGAT 59.615 43.478 0.00 0.00 0.00 2.57
3050 4246 2.758423 TGATCGACCGAGGAAATCTTGA 59.242 45.455 0.00 0.00 0.00 3.02
3051 4247 3.165058 TGATCGACCGAGGAAATCTTG 57.835 47.619 0.00 0.00 0.00 3.02
3052 4248 3.243907 GGATGATCGACCGAGGAAATCTT 60.244 47.826 0.00 0.00 0.00 2.40
3053 4249 2.297597 GGATGATCGACCGAGGAAATCT 59.702 50.000 0.00 0.00 0.00 2.40
3054 4250 2.035961 TGGATGATCGACCGAGGAAATC 59.964 50.000 0.00 0.00 0.00 2.17
3055 4251 2.039418 TGGATGATCGACCGAGGAAAT 58.961 47.619 0.00 0.00 0.00 2.17
3056 4252 1.136305 GTGGATGATCGACCGAGGAAA 59.864 52.381 0.00 0.00 0.00 3.13
3057 4253 0.744874 GTGGATGATCGACCGAGGAA 59.255 55.000 0.00 0.00 0.00 3.36
3058 4254 0.106669 AGTGGATGATCGACCGAGGA 60.107 55.000 3.88 0.00 0.00 3.71
3059 4255 0.747255 AAGTGGATGATCGACCGAGG 59.253 55.000 3.88 0.00 0.00 4.63
3060 4256 3.366476 GGATAAGTGGATGATCGACCGAG 60.366 52.174 3.88 0.00 0.00 4.63
3061 4257 2.557056 GGATAAGTGGATGATCGACCGA 59.443 50.000 3.88 0.00 0.00 4.69
3062 4258 2.558795 AGGATAAGTGGATGATCGACCG 59.441 50.000 3.88 0.00 0.00 4.79
3063 4259 4.282195 AGAAGGATAAGTGGATGATCGACC 59.718 45.833 3.88 1.65 0.00 4.79
3064 4260 5.461032 AGAAGGATAAGTGGATGATCGAC 57.539 43.478 0.00 0.00 0.00 4.20
3065 4261 6.098266 TCAAAGAAGGATAAGTGGATGATCGA 59.902 38.462 0.00 0.00 0.00 3.59
3066 4262 6.283694 TCAAAGAAGGATAAGTGGATGATCG 58.716 40.000 0.00 0.00 0.00 3.69
3067 4263 9.213799 GTATCAAAGAAGGATAAGTGGATGATC 57.786 37.037 0.00 0.00 0.00 2.92
3068 4264 8.717717 TGTATCAAAGAAGGATAAGTGGATGAT 58.282 33.333 0.00 0.00 0.00 2.45
3069 4265 7.987458 GTGTATCAAAGAAGGATAAGTGGATGA 59.013 37.037 0.00 0.00 0.00 2.92
3070 4266 7.227512 GGTGTATCAAAGAAGGATAAGTGGATG 59.772 40.741 0.00 0.00 0.00 3.51
3071 4267 7.127955 AGGTGTATCAAAGAAGGATAAGTGGAT 59.872 37.037 0.00 0.00 0.00 3.41
3072 4268 6.443849 AGGTGTATCAAAGAAGGATAAGTGGA 59.556 38.462 0.00 0.00 0.00 4.02
3073 4269 6.653989 AGGTGTATCAAAGAAGGATAAGTGG 58.346 40.000 0.00 0.00 0.00 4.00
3074 4270 9.838339 ATAAGGTGTATCAAAGAAGGATAAGTG 57.162 33.333 0.00 0.00 0.00 3.16
3080 4276 9.542462 CGATTTATAAGGTGTATCAAAGAAGGA 57.458 33.333 0.00 0.00 0.00 3.36
3081 4277 8.774586 CCGATTTATAAGGTGTATCAAAGAAGG 58.225 37.037 0.00 0.00 0.00 3.46
3082 4278 9.542462 TCCGATTTATAAGGTGTATCAAAGAAG 57.458 33.333 0.00 0.00 0.00 2.85
3083 4279 9.893634 TTCCGATTTATAAGGTGTATCAAAGAA 57.106 29.630 0.00 0.00 0.00 2.52
3084 4280 9.893634 TTTCCGATTTATAAGGTGTATCAAAGA 57.106 29.630 0.00 0.00 0.00 2.52
3087 4283 8.895737 GGTTTTCCGATTTATAAGGTGTATCAA 58.104 33.333 0.00 0.00 0.00 2.57
3088 4284 8.269317 AGGTTTTCCGATTTATAAGGTGTATCA 58.731 33.333 0.00 0.00 46.35 2.15
3089 4285 8.672823 AGGTTTTCCGATTTATAAGGTGTATC 57.327 34.615 0.00 0.00 46.35 2.24
3090 4286 8.899771 CAAGGTTTTCCGATTTATAAGGTGTAT 58.100 33.333 0.00 0.00 46.35 2.29
3091 4287 7.337436 CCAAGGTTTTCCGATTTATAAGGTGTA 59.663 37.037 0.00 0.00 46.35 2.90
3092 4288 6.152154 CCAAGGTTTTCCGATTTATAAGGTGT 59.848 38.462 0.00 0.00 46.35 4.16
3093 4289 6.152154 ACCAAGGTTTTCCGATTTATAAGGTG 59.848 38.462 0.00 0.00 46.35 4.00
3094 4290 6.152154 CACCAAGGTTTTCCGATTTATAAGGT 59.848 38.462 0.00 0.00 46.35 3.50
3095 4291 6.152154 ACACCAAGGTTTTCCGATTTATAAGG 59.848 38.462 0.00 0.00 46.35 2.69
3096 4292 7.027161 CACACCAAGGTTTTCCGATTTATAAG 58.973 38.462 0.00 0.00 46.35 1.73
3097 4293 6.071840 CCACACCAAGGTTTTCCGATTTATAA 60.072 38.462 0.00 0.00 46.35 0.98
3098 4294 5.416326 CCACACCAAGGTTTTCCGATTTATA 59.584 40.000 0.00 0.00 46.35 0.98
3099 4295 4.219725 CCACACCAAGGTTTTCCGATTTAT 59.780 41.667 0.00 0.00 46.35 1.40
3100 4296 3.570550 CCACACCAAGGTTTTCCGATTTA 59.429 43.478 0.00 0.00 46.35 1.40
3101 4297 2.364002 CCACACCAAGGTTTTCCGATTT 59.636 45.455 0.00 0.00 46.35 2.17
3102 4298 1.960689 CCACACCAAGGTTTTCCGATT 59.039 47.619 0.00 0.00 46.35 3.34
3103 4299 1.133606 ACCACACCAAGGTTTTCCGAT 60.134 47.619 0.00 0.00 46.35 4.18
3104 4300 0.256464 ACCACACCAAGGTTTTCCGA 59.744 50.000 0.00 0.00 46.35 4.55
3105 4301 0.666374 GACCACACCAAGGTTTTCCG 59.334 55.000 0.00 0.00 46.35 4.30
3106 4302 1.770294 TGACCACACCAAGGTTTTCC 58.230 50.000 0.00 0.00 40.09 3.13
3107 4303 2.758423 AGTTGACCACACCAAGGTTTTC 59.242 45.455 0.00 0.00 40.09 2.29
3108 4304 2.815158 AGTTGACCACACCAAGGTTTT 58.185 42.857 0.00 0.00 40.09 2.43
3109 4305 2.525105 AGTTGACCACACCAAGGTTT 57.475 45.000 0.00 0.00 40.09 3.27
3110 4306 2.495669 CAAAGTTGACCACACCAAGGTT 59.504 45.455 0.00 0.00 40.09 3.50
3111 4307 2.099405 CAAAGTTGACCACACCAAGGT 58.901 47.619 0.00 0.00 43.46 3.50
3112 4308 2.374184 TCAAAGTTGACCACACCAAGG 58.626 47.619 0.00 0.00 31.01 3.61
3113 4309 5.964958 ATATCAAAGTTGACCACACCAAG 57.035 39.130 0.00 0.00 40.49 3.61
3114 4310 7.576666 GCAATATATCAAAGTTGACCACACCAA 60.577 37.037 0.00 0.00 40.49 3.67
3115 4311 6.127758 GCAATATATCAAAGTTGACCACACCA 60.128 38.462 0.00 0.00 40.49 4.17
3116 4312 6.095440 AGCAATATATCAAAGTTGACCACACC 59.905 38.462 0.00 0.00 40.49 4.16
3117 4313 7.088589 AGCAATATATCAAAGTTGACCACAC 57.911 36.000 0.00 0.00 40.49 3.82
3118 4314 8.800370 TTAGCAATATATCAAAGTTGACCACA 57.200 30.769 0.00 0.00 40.49 4.17
3130 4326 9.098355 GCCATCGACTATTTTAGCAATATATCA 57.902 33.333 0.00 0.00 0.00 2.15
3131 4327 8.269424 CGCCATCGACTATTTTAGCAATATATC 58.731 37.037 0.00 0.00 38.10 1.63
3132 4328 7.979537 TCGCCATCGACTATTTTAGCAATATAT 59.020 33.333 0.00 0.00 40.21 0.86
3133 4329 7.317390 TCGCCATCGACTATTTTAGCAATATA 58.683 34.615 0.00 0.00 40.21 0.86
3134 4330 6.163476 TCGCCATCGACTATTTTAGCAATAT 58.837 36.000 0.00 0.00 40.21 1.28
3135 4331 5.534407 TCGCCATCGACTATTTTAGCAATA 58.466 37.500 0.00 0.00 40.21 1.90
3136 4332 4.377021 TCGCCATCGACTATTTTAGCAAT 58.623 39.130 0.00 0.00 40.21 3.56
3137 4333 3.787785 TCGCCATCGACTATTTTAGCAA 58.212 40.909 0.00 0.00 40.21 3.91
3138 4334 3.446310 TCGCCATCGACTATTTTAGCA 57.554 42.857 0.00 0.00 40.21 3.49
3139 4335 3.802685 ACTTCGCCATCGACTATTTTAGC 59.197 43.478 0.00 0.00 45.43 3.09
3140 4336 4.804139 ACACTTCGCCATCGACTATTTTAG 59.196 41.667 0.00 0.00 45.43 1.85
3141 4337 4.751060 ACACTTCGCCATCGACTATTTTA 58.249 39.130 0.00 0.00 45.43 1.52
3142 4338 3.596214 ACACTTCGCCATCGACTATTTT 58.404 40.909 0.00 0.00 45.43 1.82
3143 4339 3.247006 ACACTTCGCCATCGACTATTT 57.753 42.857 0.00 0.00 45.43 1.40
3144 4340 2.961526 ACACTTCGCCATCGACTATT 57.038 45.000 0.00 0.00 45.43 1.73
3145 4341 3.568430 TGATACACTTCGCCATCGACTAT 59.432 43.478 0.00 0.00 45.43 2.12
3146 4342 2.946990 TGATACACTTCGCCATCGACTA 59.053 45.455 0.00 0.00 45.43 2.59
3147 4343 1.749063 TGATACACTTCGCCATCGACT 59.251 47.619 0.00 0.00 45.43 4.18
3148 4344 2.203800 TGATACACTTCGCCATCGAC 57.796 50.000 0.00 0.00 45.43 4.20
3149 4345 2.623416 AGATGATACACTTCGCCATCGA 59.377 45.455 0.00 0.00 43.89 3.59
3150 4346 3.018598 AGATGATACACTTCGCCATCG 57.981 47.619 0.00 0.00 38.77 3.84
3156 4352 9.790389 GGTATCCTATAAAGATGATACACTTCG 57.210 37.037 9.83 0.00 40.71 3.79
3159 4355 9.615660 TTGGGTATCCTATAAAGATGATACACT 57.384 33.333 10.92 0.00 42.13 3.55
3184 4380 5.745312 TTCTGGTCTGTGACACATATCTT 57.255 39.130 9.11 0.00 33.68 2.40
3189 4385 3.326006 ACTCATTCTGGTCTGTGACACAT 59.674 43.478 9.11 0.00 33.68 3.21
3190 4386 2.700371 ACTCATTCTGGTCTGTGACACA 59.300 45.455 8.26 8.26 33.68 3.72
3191 4387 3.393089 ACTCATTCTGGTCTGTGACAC 57.607 47.619 0.00 0.00 33.68 3.67
3198 4394 3.133721 GTGGAGCATACTCATTCTGGTCT 59.866 47.826 0.00 0.00 45.42 3.85
3248 4445 9.689501 TTTTGATCCCTTCGGTAATTACTTTAT 57.310 29.630 15.05 0.90 0.00 1.40
3254 4451 9.689501 ATTAAGTTTTGATCCCTTCGGTAATTA 57.310 29.630 0.00 0.00 0.00 1.40
3256 4453 8.466798 CAATTAAGTTTTGATCCCTTCGGTAAT 58.533 33.333 0.00 0.00 0.00 1.89
3259 4456 5.336451 GCAATTAAGTTTTGATCCCTTCGGT 60.336 40.000 0.00 0.00 0.00 4.69
3261 4458 5.708948 TGCAATTAAGTTTTGATCCCTTCG 58.291 37.500 0.00 0.00 0.00 3.79
3286 4483 6.528072 GTGAGAATGTAAAAGCAATAGCAACC 59.472 38.462 0.00 0.00 45.49 3.77
3287 4484 7.083858 TGTGAGAATGTAAAAGCAATAGCAAC 58.916 34.615 0.00 0.00 45.49 4.17
3355 4554 4.037446 TGAAACATAACACAGTTGGAAGCC 59.963 41.667 0.00 0.00 0.00 4.35
3378 4577 5.990996 CCAGCCAAAACTTCAAACACATATT 59.009 36.000 0.00 0.00 0.00 1.28
3379 4578 5.070313 ACCAGCCAAAACTTCAAACACATAT 59.930 36.000 0.00 0.00 0.00 1.78
3427 4626 4.607293 AAAGAGAAAAATGGCAAGACCC 57.393 40.909 0.00 0.00 37.83 4.46
3434 4633 8.648557 AAACTGAAACTAAAGAGAAAAATGGC 57.351 30.769 0.00 0.00 0.00 4.40
3801 5002 4.835615 ACAACAGATCTCCACTAAGTGAGT 59.164 41.667 0.00 0.00 39.82 3.41
3802 5003 5.047731 TCACAACAGATCTCCACTAAGTGAG 60.048 44.000 0.00 0.00 35.23 3.51
3803 5004 4.832823 TCACAACAGATCTCCACTAAGTGA 59.167 41.667 0.00 0.00 35.23 3.41
3804 5005 5.139435 TCACAACAGATCTCCACTAAGTG 57.861 43.478 0.00 0.00 0.00 3.16
3809 5010 1.277557 GGCTCACAACAGATCTCCACT 59.722 52.381 0.00 0.00 0.00 4.00
3848 5049 3.835779 CGAATGATGGCATTGTTTCACA 58.164 40.909 0.00 0.00 44.47 3.58
4085 5367 7.120923 TGTACCACAGGTATTCTAATCCTTC 57.879 40.000 0.00 0.00 40.54 3.46
4098 5380 6.094881 CGGATGAATATTTTTGTACCACAGGT 59.905 38.462 0.00 0.00 40.16 4.00
4113 5395 1.995542 AGGGGGCATTCGGATGAATAT 59.004 47.619 8.22 0.00 42.94 1.28
4128 5410 3.200825 CAGGATAGCCAACATATAGGGGG 59.799 52.174 0.00 0.00 36.29 5.40
4130 5412 5.965033 ATCAGGATAGCCAACATATAGGG 57.035 43.478 0.00 0.00 36.29 3.53
4196 5532 4.695928 AGTTTCAGGTTTCGAGCTTTATCC 59.304 41.667 0.00 0.00 0.00 2.59
4207 5543 5.248870 TGAAAGCAAGAGTTTCAGGTTTC 57.751 39.130 14.02 14.02 44.35 2.78
4247 5583 2.733956 TGGATGTTCATAACAAGGCCC 58.266 47.619 0.00 0.00 45.86 5.80
4250 5586 8.739039 TCACTTTTATGGATGTTCATAACAAGG 58.261 33.333 13.96 8.05 45.86 3.61
4263 5599 7.781324 AACAGGACAATTCACTTTTATGGAT 57.219 32.000 0.00 0.00 0.00 3.41
4289 5625 2.172293 AGCCATCTCATTGGTCTCTTCC 59.828 50.000 0.00 0.00 39.11 3.46
4298 5634 4.612259 GCGTATTTAGCAGCCATCTCATTG 60.612 45.833 0.00 0.00 34.19 2.82
4376 5712 9.603298 CGGTTTATGAGATGTTGATAATGAATG 57.397 33.333 0.00 0.00 0.00 2.67
4377 5713 8.786898 CCGGTTTATGAGATGTTGATAATGAAT 58.213 33.333 0.00 0.00 0.00 2.57
4378 5714 7.990314 TCCGGTTTATGAGATGTTGATAATGAA 59.010 33.333 0.00 0.00 0.00 2.57
4379 5715 7.505258 TCCGGTTTATGAGATGTTGATAATGA 58.495 34.615 0.00 0.00 0.00 2.57
4380 5716 7.442364 ACTCCGGTTTATGAGATGTTGATAATG 59.558 37.037 0.00 0.00 32.84 1.90
4381 5717 7.509546 ACTCCGGTTTATGAGATGTTGATAAT 58.490 34.615 0.00 0.00 32.84 1.28
4382 5718 6.884832 ACTCCGGTTTATGAGATGTTGATAA 58.115 36.000 0.00 0.00 32.84 1.75
4383 5719 6.479972 ACTCCGGTTTATGAGATGTTGATA 57.520 37.500 0.00 0.00 32.84 2.15
4384 5720 5.359194 ACTCCGGTTTATGAGATGTTGAT 57.641 39.130 0.00 0.00 32.84 2.57
4385 5721 4.819105 ACTCCGGTTTATGAGATGTTGA 57.181 40.909 0.00 0.00 32.84 3.18
4386 5722 5.902681 TCTACTCCGGTTTATGAGATGTTG 58.097 41.667 0.00 0.00 32.84 3.33
4387 5723 6.732896 ATCTACTCCGGTTTATGAGATGTT 57.267 37.500 0.00 0.00 32.84 2.71
4388 5724 6.776116 TGTATCTACTCCGGTTTATGAGATGT 59.224 38.462 0.00 0.00 32.84 3.06
4389 5725 7.215719 TGTATCTACTCCGGTTTATGAGATG 57.784 40.000 0.00 0.00 32.84 2.90
4390 5726 7.451877 ACATGTATCTACTCCGGTTTATGAGAT 59.548 37.037 0.00 5.43 32.84 2.75
4391 5727 6.776116 ACATGTATCTACTCCGGTTTATGAGA 59.224 38.462 0.00 0.00 32.84 3.27
4392 5728 6.982852 ACATGTATCTACTCCGGTTTATGAG 58.017 40.000 0.00 0.00 34.73 2.90
4393 5729 6.971726 ACATGTATCTACTCCGGTTTATGA 57.028 37.500 0.00 0.00 0.00 2.15
4394 5730 7.654568 TGTACATGTATCTACTCCGGTTTATG 58.345 38.462 9.18 0.00 0.00 1.90
4395 5731 7.828508 TGTACATGTATCTACTCCGGTTTAT 57.171 36.000 9.18 0.00 0.00 1.40
4396 5732 7.643569 TTGTACATGTATCTACTCCGGTTTA 57.356 36.000 9.18 0.00 0.00 2.01
4397 5733 6.534475 TTGTACATGTATCTACTCCGGTTT 57.466 37.500 9.18 0.00 0.00 3.27
4398 5734 6.534475 TTTGTACATGTATCTACTCCGGTT 57.466 37.500 9.18 0.00 0.00 4.44
4399 5735 6.154021 ACTTTTGTACATGTATCTACTCCGGT 59.846 38.462 9.18 0.00 0.00 5.28
4400 5736 6.475727 CACTTTTGTACATGTATCTACTCCGG 59.524 42.308 9.18 0.00 0.00 5.14
4401 5737 6.019801 GCACTTTTGTACATGTATCTACTCCG 60.020 42.308 9.18 0.00 0.00 4.63
4402 5738 7.042335 AGCACTTTTGTACATGTATCTACTCC 58.958 38.462 9.18 0.00 0.00 3.85
4403 5739 8.480643 AAGCACTTTTGTACATGTATCTACTC 57.519 34.615 9.18 0.00 0.00 2.59
4404 5740 9.587772 CTAAGCACTTTTGTACATGTATCTACT 57.412 33.333 9.18 0.00 0.00 2.57
4405 5741 9.582431 TCTAAGCACTTTTGTACATGTATCTAC 57.418 33.333 9.18 0.00 0.00 2.59
4406 5742 9.803315 CTCTAAGCACTTTTGTACATGTATCTA 57.197 33.333 9.18 0.00 0.00 1.98
4407 5743 8.531982 TCTCTAAGCACTTTTGTACATGTATCT 58.468 33.333 9.18 0.00 0.00 1.98
4408 5744 8.703604 TCTCTAAGCACTTTTGTACATGTATC 57.296 34.615 9.18 3.86 0.00 2.24
4409 5745 9.502091 TTTCTCTAAGCACTTTTGTACATGTAT 57.498 29.630 9.18 0.00 0.00 2.29
4410 5746 8.770828 GTTTCTCTAAGCACTTTTGTACATGTA 58.229 33.333 0.08 0.08 0.00 2.29
4411 5747 7.518370 CGTTTCTCTAAGCACTTTTGTACATGT 60.518 37.037 2.69 2.69 0.00 3.21
4412 5748 6.792250 CGTTTCTCTAAGCACTTTTGTACATG 59.208 38.462 0.00 0.00 0.00 3.21
4413 5749 6.073222 CCGTTTCTCTAAGCACTTTTGTACAT 60.073 38.462 0.00 0.00 0.00 2.29
4414 5750 5.235616 CCGTTTCTCTAAGCACTTTTGTACA 59.764 40.000 0.00 0.00 0.00 2.90
4415 5751 5.235831 ACCGTTTCTCTAAGCACTTTTGTAC 59.764 40.000 0.00 0.00 0.00 2.90
4416 5752 5.362263 ACCGTTTCTCTAAGCACTTTTGTA 58.638 37.500 0.00 0.00 0.00 2.41
4417 5753 4.196971 ACCGTTTCTCTAAGCACTTTTGT 58.803 39.130 0.00 0.00 0.00 2.83
4418 5754 4.813296 ACCGTTTCTCTAAGCACTTTTG 57.187 40.909 0.00 0.00 0.00 2.44
4419 5755 4.879545 TCAACCGTTTCTCTAAGCACTTTT 59.120 37.500 0.00 0.00 0.00 2.27
4420 5756 4.448210 TCAACCGTTTCTCTAAGCACTTT 58.552 39.130 0.00 0.00 0.00 2.66
4421 5757 4.058817 CTCAACCGTTTCTCTAAGCACTT 58.941 43.478 0.00 0.00 0.00 3.16
4422 5758 3.654414 CTCAACCGTTTCTCTAAGCACT 58.346 45.455 0.00 0.00 0.00 4.40
4423 5759 2.157863 GCTCAACCGTTTCTCTAAGCAC 59.842 50.000 0.00 0.00 0.00 4.40
4424 5760 2.224185 TGCTCAACCGTTTCTCTAAGCA 60.224 45.455 0.00 0.00 36.26 3.91
4425 5761 2.413837 TGCTCAACCGTTTCTCTAAGC 58.586 47.619 0.00 0.00 0.00 3.09
4426 5762 5.385617 CAATTGCTCAACCGTTTCTCTAAG 58.614 41.667 0.00 0.00 0.00 2.18
4427 5763 4.215399 CCAATTGCTCAACCGTTTCTCTAA 59.785 41.667 0.00 0.00 0.00 2.10
4428 5764 3.751175 CCAATTGCTCAACCGTTTCTCTA 59.249 43.478 0.00 0.00 0.00 2.43
4429 5765 2.554032 CCAATTGCTCAACCGTTTCTCT 59.446 45.455 0.00 0.00 0.00 3.10
4430 5766 2.552315 TCCAATTGCTCAACCGTTTCTC 59.448 45.455 0.00 0.00 0.00 2.87
4431 5767 2.582052 TCCAATTGCTCAACCGTTTCT 58.418 42.857 0.00 0.00 0.00 2.52
4432 5768 3.363341 TTCCAATTGCTCAACCGTTTC 57.637 42.857 0.00 0.00 0.00 2.78
4433 5769 3.492482 CCTTTCCAATTGCTCAACCGTTT 60.492 43.478 0.00 0.00 0.00 3.60
4434 5770 2.035832 CCTTTCCAATTGCTCAACCGTT 59.964 45.455 0.00 0.00 0.00 4.44
4435 5771 1.613437 CCTTTCCAATTGCTCAACCGT 59.387 47.619 0.00 0.00 0.00 4.83
4436 5772 1.669795 GCCTTTCCAATTGCTCAACCG 60.670 52.381 0.00 0.00 0.00 4.44
4437 5773 1.344114 TGCCTTTCCAATTGCTCAACC 59.656 47.619 0.00 0.00 0.00 3.77
4438 5774 2.818130 TGCCTTTCCAATTGCTCAAC 57.182 45.000 0.00 0.00 0.00 3.18
4439 5775 2.699846 ACTTGCCTTTCCAATTGCTCAA 59.300 40.909 0.00 0.00 0.00 3.02
4440 5776 2.318908 ACTTGCCTTTCCAATTGCTCA 58.681 42.857 0.00 0.00 0.00 4.26
4441 5777 3.062042 CAACTTGCCTTTCCAATTGCTC 58.938 45.455 0.00 0.00 0.00 4.26
4442 5778 2.435437 ACAACTTGCCTTTCCAATTGCT 59.565 40.909 0.00 0.00 0.00 3.91
4443 5779 2.837498 ACAACTTGCCTTTCCAATTGC 58.163 42.857 0.00 0.00 0.00 3.56
4444 5780 5.118286 AGAAACAACTTGCCTTTCCAATTG 58.882 37.500 0.00 0.00 0.00 2.32
4445 5781 5.104982 TGAGAAACAACTTGCCTTTCCAATT 60.105 36.000 2.68 0.00 0.00 2.32
4446 5782 4.405358 TGAGAAACAACTTGCCTTTCCAAT 59.595 37.500 2.68 0.00 0.00 3.16
4447 5783 3.766591 TGAGAAACAACTTGCCTTTCCAA 59.233 39.130 2.68 0.00 0.00 3.53
4448 5784 3.360867 TGAGAAACAACTTGCCTTTCCA 58.639 40.909 2.68 0.00 0.00 3.53
4449 5785 4.590850 ATGAGAAACAACTTGCCTTTCC 57.409 40.909 2.68 0.00 0.00 3.13
4450 5786 4.746611 CCAATGAGAAACAACTTGCCTTTC 59.253 41.667 0.00 0.00 0.00 2.62
4451 5787 4.405358 TCCAATGAGAAACAACTTGCCTTT 59.595 37.500 0.00 0.00 0.00 3.11
4452 5788 3.960102 TCCAATGAGAAACAACTTGCCTT 59.040 39.130 0.00 0.00 0.00 4.35
4453 5789 3.565307 TCCAATGAGAAACAACTTGCCT 58.435 40.909 0.00 0.00 0.00 4.75
4454 5790 3.305608 CCTCCAATGAGAAACAACTTGCC 60.306 47.826 0.00 0.00 41.42 4.52
4455 5791 3.569701 TCCTCCAATGAGAAACAACTTGC 59.430 43.478 0.00 0.00 41.42 4.01
4456 5792 4.580167 TGTCCTCCAATGAGAAACAACTTG 59.420 41.667 0.00 0.00 41.42 3.16
4457 5793 4.792068 TGTCCTCCAATGAGAAACAACTT 58.208 39.130 0.00 0.00 41.42 2.66
4458 5794 4.437682 TGTCCTCCAATGAGAAACAACT 57.562 40.909 0.00 0.00 41.42 3.16
4459 5795 5.712152 ATTGTCCTCCAATGAGAAACAAC 57.288 39.130 10.55 0.00 42.24 3.32
4460 5796 5.832595 TCAATTGTCCTCCAATGAGAAACAA 59.167 36.000 5.13 10.67 43.04 2.83
4461 5797 5.384336 TCAATTGTCCTCCAATGAGAAACA 58.616 37.500 5.13 0.00 43.04 2.83
4462 5798 5.964958 TCAATTGTCCTCCAATGAGAAAC 57.035 39.130 5.13 0.00 43.04 2.78
4463 5799 7.543359 AAATCAATTGTCCTCCAATGAGAAA 57.457 32.000 5.13 0.00 43.04 2.52
4464 5800 7.233144 TCAAAATCAATTGTCCTCCAATGAGAA 59.767 33.333 5.13 0.00 43.04 2.87
4465 5801 6.720748 TCAAAATCAATTGTCCTCCAATGAGA 59.279 34.615 5.13 0.00 43.04 3.27
4466 5802 6.927416 TCAAAATCAATTGTCCTCCAATGAG 58.073 36.000 5.13 0.00 43.04 2.90
4467 5803 6.914654 TCAAAATCAATTGTCCTCCAATGA 57.085 33.333 5.13 0.00 43.04 2.57
4468 5804 7.324935 TGATCAAAATCAATTGTCCTCCAATG 58.675 34.615 5.13 0.00 43.04 2.82
4469 5805 7.484993 TGATCAAAATCAATTGTCCTCCAAT 57.515 32.000 5.13 0.00 45.81 3.16
4470 5806 6.914654 TGATCAAAATCAATTGTCCTCCAA 57.085 33.333 5.13 0.00 38.97 3.53
4471 5807 6.914654 TTGATCAAAATCAATTGTCCTCCA 57.085 33.333 5.45 0.00 44.94 3.86
4482 5818 6.127054 ACCGAGGATAGACTTGATCAAAATCA 60.127 38.462 17.41 7.59 40.18 2.57
4483 5819 6.284459 ACCGAGGATAGACTTGATCAAAATC 58.716 40.000 9.88 10.07 0.00 2.17
4484 5820 6.240549 ACCGAGGATAGACTTGATCAAAAT 57.759 37.500 9.88 0.23 0.00 1.82
4485 5821 5.677319 ACCGAGGATAGACTTGATCAAAA 57.323 39.130 9.88 0.00 0.00 2.44
4486 5822 5.422331 AGAACCGAGGATAGACTTGATCAAA 59.578 40.000 9.88 0.00 0.00 2.69
4487 5823 4.956700 AGAACCGAGGATAGACTTGATCAA 59.043 41.667 8.12 8.12 0.00 2.57
4488 5824 4.537751 AGAACCGAGGATAGACTTGATCA 58.462 43.478 0.00 0.00 0.00 2.92
4489 5825 4.825085 AGAGAACCGAGGATAGACTTGATC 59.175 45.833 0.00 0.00 0.00 2.92
4490 5826 4.798882 AGAGAACCGAGGATAGACTTGAT 58.201 43.478 0.00 0.00 0.00 2.57
4491 5827 4.237976 AGAGAACCGAGGATAGACTTGA 57.762 45.455 0.00 0.00 0.00 3.02
4492 5828 7.627513 GCATATAGAGAACCGAGGATAGACTTG 60.628 44.444 0.00 0.00 0.00 3.16
4493 5829 6.376018 GCATATAGAGAACCGAGGATAGACTT 59.624 42.308 0.00 0.00 0.00 3.01
4494 5830 5.883673 GCATATAGAGAACCGAGGATAGACT 59.116 44.000 0.00 0.00 0.00 3.24
4495 5831 5.883673 AGCATATAGAGAACCGAGGATAGAC 59.116 44.000 0.00 0.00 0.00 2.59
4496 5832 6.068461 AGCATATAGAGAACCGAGGATAGA 57.932 41.667 0.00 0.00 0.00 1.98
4497 5833 6.119536 AGAGCATATAGAGAACCGAGGATAG 58.880 44.000 0.00 0.00 0.00 2.08
4498 5834 6.068461 AGAGCATATAGAGAACCGAGGATA 57.932 41.667 0.00 0.00 0.00 2.59
4499 5835 4.929479 AGAGCATATAGAGAACCGAGGAT 58.071 43.478 0.00 0.00 0.00 3.24
4500 5836 4.328536 GAGAGCATATAGAGAACCGAGGA 58.671 47.826 0.00 0.00 0.00 3.71
4501 5837 3.442273 GGAGAGCATATAGAGAACCGAGG 59.558 52.174 0.00 0.00 0.00 4.63
4502 5838 4.331968 AGGAGAGCATATAGAGAACCGAG 58.668 47.826 0.00 0.00 0.00 4.63
4503 5839 4.374689 AGGAGAGCATATAGAGAACCGA 57.625 45.455 0.00 0.00 0.00 4.69
4504 5840 5.010112 TGAAAGGAGAGCATATAGAGAACCG 59.990 44.000 0.00 0.00 0.00 4.44
4505 5841 6.412362 TGAAAGGAGAGCATATAGAGAACC 57.588 41.667 0.00 0.00 0.00 3.62
4506 5842 8.900983 AATTGAAAGGAGAGCATATAGAGAAC 57.099 34.615 0.00 0.00 0.00 3.01
4507 5843 8.153550 GGAATTGAAAGGAGAGCATATAGAGAA 58.846 37.037 0.00 0.00 0.00 2.87
4508 5844 7.256475 GGGAATTGAAAGGAGAGCATATAGAGA 60.256 40.741 0.00 0.00 0.00 3.10
4509 5845 6.878389 GGGAATTGAAAGGAGAGCATATAGAG 59.122 42.308 0.00 0.00 0.00 2.43
4510 5846 6.329986 TGGGAATTGAAAGGAGAGCATATAGA 59.670 38.462 0.00 0.00 0.00 1.98
4511 5847 6.537355 TGGGAATTGAAAGGAGAGCATATAG 58.463 40.000 0.00 0.00 0.00 1.31
4512 5848 6.514012 TGGGAATTGAAAGGAGAGCATATA 57.486 37.500 0.00 0.00 0.00 0.86
4513 5849 5.393068 TGGGAATTGAAAGGAGAGCATAT 57.607 39.130 0.00 0.00 0.00 1.78
4514 5850 4.860802 TGGGAATTGAAAGGAGAGCATA 57.139 40.909 0.00 0.00 0.00 3.14
4515 5851 3.744940 TGGGAATTGAAAGGAGAGCAT 57.255 42.857 0.00 0.00 0.00 3.79
4516 5852 3.524095 TTGGGAATTGAAAGGAGAGCA 57.476 42.857 0.00 0.00 0.00 4.26
4517 5853 4.524328 TCTTTTGGGAATTGAAAGGAGAGC 59.476 41.667 0.00 0.00 0.00 4.09
4518 5854 5.184671 CCTCTTTTGGGAATTGAAAGGAGAG 59.815 44.000 11.79 0.00 37.43 3.20
4519 5855 5.079643 CCTCTTTTGGGAATTGAAAGGAGA 58.920 41.667 11.79 0.00 37.43 3.71
4520 5856 4.322273 GCCTCTTTTGGGAATTGAAAGGAG 60.322 45.833 0.00 0.00 35.89 3.69
4521 5857 3.578282 GCCTCTTTTGGGAATTGAAAGGA 59.422 43.478 0.00 0.00 0.00 3.36
4522 5858 3.306989 GGCCTCTTTTGGGAATTGAAAGG 60.307 47.826 0.00 0.00 0.00 3.11
4523 5859 3.306989 GGGCCTCTTTTGGGAATTGAAAG 60.307 47.826 0.84 0.00 0.00 2.62
4524 5860 2.637382 GGGCCTCTTTTGGGAATTGAAA 59.363 45.455 0.84 0.00 0.00 2.69
4525 5861 2.158173 AGGGCCTCTTTTGGGAATTGAA 60.158 45.455 0.00 0.00 0.00 2.69
4526 5862 1.432807 AGGGCCTCTTTTGGGAATTGA 59.567 47.619 0.00 0.00 0.00 2.57
4527 5863 1.551883 CAGGGCCTCTTTTGGGAATTG 59.448 52.381 0.95 0.00 0.00 2.32
4528 5864 1.942776 CAGGGCCTCTTTTGGGAATT 58.057 50.000 0.95 0.00 0.00 2.17
4529 5865 0.615827 GCAGGGCCTCTTTTGGGAAT 60.616 55.000 0.95 0.00 0.00 3.01
4530 5866 1.228862 GCAGGGCCTCTTTTGGGAA 60.229 57.895 0.95 0.00 0.00 3.97
4531 5867 2.017668 TTGCAGGGCCTCTTTTGGGA 62.018 55.000 0.95 0.00 0.00 4.37
4532 5868 1.120795 TTTGCAGGGCCTCTTTTGGG 61.121 55.000 0.95 0.00 0.00 4.12
4533 5869 0.319405 CTTTGCAGGGCCTCTTTTGG 59.681 55.000 0.95 0.00 0.00 3.28
4534 5870 0.319405 CCTTTGCAGGGCCTCTTTTG 59.681 55.000 0.95 0.00 36.36 2.44
4535 5871 1.475169 GCCTTTGCAGGGCCTCTTTT 61.475 55.000 18.40 0.00 43.49 2.27
4536 5872 1.910276 GCCTTTGCAGGGCCTCTTT 60.910 57.895 18.40 0.00 43.49 2.52
4537 5873 2.283460 GCCTTTGCAGGGCCTCTT 60.283 61.111 18.40 0.00 43.49 2.85
4543 5879 2.077687 ATAATCCAGCCTTTGCAGGG 57.922 50.000 3.74 3.74 43.95 4.45
4544 5880 3.448301 TGAAATAATCCAGCCTTTGCAGG 59.552 43.478 0.00 0.00 45.10 4.85
4545 5881 4.724074 TGAAATAATCCAGCCTTTGCAG 57.276 40.909 0.00 0.00 41.13 4.41
4546 5882 5.480642 TTTGAAATAATCCAGCCTTTGCA 57.519 34.783 0.00 0.00 41.13 4.08
4547 5883 6.594937 TGAATTTGAAATAATCCAGCCTTTGC 59.405 34.615 0.00 0.00 37.95 3.68
4548 5884 8.036575 TCTGAATTTGAAATAATCCAGCCTTTG 58.963 33.333 0.00 0.00 0.00 2.77
4549 5885 8.137745 TCTGAATTTGAAATAATCCAGCCTTT 57.862 30.769 0.00 0.00 0.00 3.11
4550 5886 7.722949 TCTGAATTTGAAATAATCCAGCCTT 57.277 32.000 0.00 0.00 0.00 4.35
4551 5887 7.909485 ATCTGAATTTGAAATAATCCAGCCT 57.091 32.000 0.00 0.00 0.00 4.58
4552 5888 7.654923 GGAATCTGAATTTGAAATAATCCAGCC 59.345 37.037 0.00 0.00 0.00 4.85
4553 5889 8.419442 AGGAATCTGAATTTGAAATAATCCAGC 58.581 33.333 0.00 0.00 0.00 4.85
4556 5892 9.455847 CGAAGGAATCTGAATTTGAAATAATCC 57.544 33.333 0.00 0.00 0.00 3.01



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.