Multiple sequence alignment - TraesCS6B01G128500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G128500 chr6B 100.000 5745 0 0 1 5745 124082605 124088349 0.000000e+00 10610.0
1 TraesCS6B01G128500 chr6B 97.919 913 15 2 1 913 346317567 346316659 0.000000e+00 1578.0
2 TraesCS6B01G128500 chr6B 98.119 319 5 1 1023 1341 412160301 412159984 6.500000e-154 555.0
3 TraesCS6B01G128500 chr6B 84.211 171 25 2 5458 5627 59294043 59294212 1.280000e-36 165.0
4 TraesCS6B01G128500 chr6D 96.823 3683 92 8 1342 5017 47624094 47620430 0.000000e+00 6130.0
5 TraesCS6B01G128500 chr6D 94.515 237 9 3 5017 5250 47620399 47620164 4.230000e-96 363.0
6 TraesCS6B01G128500 chr6D 97.436 117 3 0 909 1025 47626440 47626324 3.510000e-47 200.0
7 TraesCS6B01G128500 chr6D 80.392 204 36 4 2746 2946 5044095 5044297 9.970000e-33 152.0
8 TraesCS6B01G128500 chr6D 94.565 92 3 1 5339 5430 47620151 47620062 2.160000e-29 141.0
9 TraesCS6B01G128500 chr6A 94.593 2626 96 22 1342 3955 68129221 68131812 0.000000e+00 4021.0
10 TraesCS6B01G128500 chr6A 96.663 959 28 3 4059 5017 68131859 68132813 0.000000e+00 1591.0
11 TraesCS6B01G128500 chr6A 98.418 316 5 0 1026 1341 234186033 234186348 1.810000e-154 556.0
12 TraesCS6B01G128500 chr6A 92.276 246 17 1 5011 5254 68132838 68133083 1.180000e-91 348.0
13 TraesCS6B01G128500 chr6A 98.291 117 2 0 909 1025 68126860 68126976 7.550000e-49 206.0
14 TraesCS6B01G128500 chr6A 89.844 128 4 3 5339 5466 68133092 68133210 7.710000e-34 156.0
15 TraesCS6B01G128500 chr6A 96.364 55 2 0 3973 4027 68131809 68131863 2.200000e-14 91.6
16 TraesCS6B01G128500 chr6A 83.333 66 6 3 2893 2955 12016625 12016688 8.040000e-04 56.5
17 TraesCS6B01G128500 chr5A 82.487 2107 280 49 1342 3393 655072631 655070559 0.000000e+00 1764.0
18 TraesCS6B01G128500 chr5A 97.819 321 7 0 1021 1341 82309935 82310255 6.500000e-154 555.0
19 TraesCS6B01G128500 chr5A 88.889 117 13 0 909 1025 655075003 655074887 1.670000e-30 145.0
20 TraesCS6B01G128500 chr5B 98.028 913 16 2 1 912 216657303 216658214 0.000000e+00 1585.0
21 TraesCS6B01G128500 chr5B 83.961 1646 222 22 1342 2958 664377739 664376107 0.000000e+00 1539.0
22 TraesCS6B01G128500 chr5B 98.418 316 5 0 1026 1341 292191809 292191494 1.810000e-154 556.0
23 TraesCS6B01G128500 chr5B 80.263 456 61 20 2954 3393 664376029 664375587 3.340000e-82 316.0
24 TraesCS6B01G128500 chr5B 89.744 117 12 0 909 1025 664380088 664379972 3.590000e-32 150.0
25 TraesCS6B01G128500 chr3B 97.697 912 21 0 1 912 367840994 367840083 0.000000e+00 1568.0
26 TraesCS6B01G128500 chr3B 97.590 913 20 2 1 913 178258557 178259467 0.000000e+00 1563.0
27 TraesCS6B01G128500 chr3B 98.734 316 4 0 1026 1341 53351366 53351681 3.890000e-156 562.0
28 TraesCS6B01G128500 chr3B 87.629 97 11 1 5371 5467 114728361 114728456 1.690000e-20 111.0
29 TraesCS6B01G128500 chr2B 97.590 913 22 0 1 913 214825645 214824733 0.000000e+00 1565.0
30 TraesCS6B01G128500 chr2B 84.314 153 24 0 5473 5625 792532315 792532467 3.590000e-32 150.0
31 TraesCS6B01G128500 chr1B 97.374 914 23 1 1 913 141118971 141119884 0.000000e+00 1554.0
32 TraesCS6B01G128500 chr1B 97.368 912 24 0 1 912 316258682 316257771 0.000000e+00 1552.0
33 TraesCS6B01G128500 chr1B 96.947 917 26 2 1 916 402111469 402110554 0.000000e+00 1537.0
34 TraesCS6B01G128500 chr1B 76.897 580 97 22 2448 3010 645708239 645708798 1.570000e-75 294.0
35 TraesCS6B01G128500 chr4B 97.152 913 24 2 1 913 644325084 644324174 0.000000e+00 1541.0
36 TraesCS6B01G128500 chrUn 83.578 1224 191 2 1597 2820 62649172 62650385 0.000000e+00 1138.0
37 TraesCS6B01G128500 chrUn 82.486 177 31 0 1641 1817 62408926 62409102 7.710000e-34 156.0
38 TraesCS6B01G128500 chrUn 86.538 104 14 0 922 1025 62647021 62647124 1.310000e-21 115.0
39 TraesCS6B01G128500 chr7B 80.579 1452 251 19 1376 2820 736139600 736141027 0.000000e+00 1090.0
40 TraesCS6B01G128500 chr7B 98.730 315 4 0 1027 1341 700429983 700429669 1.400000e-155 560.0
41 TraesCS6B01G128500 chr7B 91.089 101 9 0 925 1025 736137396 736137496 2.790000e-28 137.0
42 TraesCS6B01G128500 chr5D 83.604 1171 179 9 1798 2958 527573895 527572728 0.000000e+00 1086.0
43 TraesCS6B01G128500 chr5D 83.604 1171 179 9 1798 2958 527603458 527602291 0.000000e+00 1086.0
44 TraesCS6B01G128500 chr5D 85.835 473 38 14 1342 1794 527574997 527574534 5.210000e-130 475.0
45 TraesCS6B01G128500 chr5D 85.835 473 38 14 1342 1794 527604602 527604139 5.210000e-130 475.0
46 TraesCS6B01G128500 chr5D 81.319 455 57 20 2954 3393 527572673 527572232 1.530000e-90 344.0
47 TraesCS6B01G128500 chr5D 81.319 455 57 20 2954 3393 527602236 527601795 1.530000e-90 344.0
48 TraesCS6B01G128500 chr5D 85.326 184 24 3 5459 5639 79166123 79165940 2.730000e-43 187.0
49 TraesCS6B01G128500 chr5D 88.889 117 13 0 909 1025 527577382 527577266 1.670000e-30 145.0
50 TraesCS6B01G128500 chr5D 88.889 117 13 0 909 1025 527606987 527606871 1.670000e-30 145.0
51 TraesCS6B01G128500 chr1A 85.776 696 79 15 2461 3146 576352993 576352308 0.000000e+00 719.0
52 TraesCS6B01G128500 chr1A 86.585 164 22 0 1600 1763 576353302 576353139 1.270000e-41 182.0
53 TraesCS6B01G128500 chr1A 82.941 170 27 2 5459 5627 277538765 277538597 9.970000e-33 152.0
54 TraesCS6B01G128500 chr1A 89.796 98 10 0 928 1025 576355375 576355278 6.040000e-25 126.0
55 TraesCS6B01G128500 chr4A 98.734 316 4 0 1026 1341 578156418 578156733 3.890000e-156 562.0
56 TraesCS6B01G128500 chr4A 98.734 316 4 0 1026 1341 689074628 689074943 3.890000e-156 562.0
57 TraesCS6B01G128500 chr2A 98.726 314 4 0 1028 1341 387551624 387551311 5.030000e-155 558.0
58 TraesCS6B01G128500 chr3D 87.629 97 11 1 5371 5467 67651288 67651383 1.690000e-20 111.0
59 TraesCS6B01G128500 chr3A 85.567 97 13 1 5371 5467 79189983 79189888 3.660000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G128500 chr6B 124082605 124088349 5744 False 10610.000000 10610 100.000000 1 5745 1 chr6B.!!$F2 5744
1 TraesCS6B01G128500 chr6B 346316659 346317567 908 True 1578.000000 1578 97.919000 1 913 1 chr6B.!!$R1 912
2 TraesCS6B01G128500 chr6D 47620062 47626440 6378 True 1708.500000 6130 95.834750 909 5430 4 chr6D.!!$R1 4521
3 TraesCS6B01G128500 chr6A 68126860 68133210 6350 False 1068.933333 4021 94.671833 909 5466 6 chr6A.!!$F3 4557
4 TraesCS6B01G128500 chr5A 655070559 655075003 4444 True 954.500000 1764 85.688000 909 3393 2 chr5A.!!$R1 2484
5 TraesCS6B01G128500 chr5B 216657303 216658214 911 False 1585.000000 1585 98.028000 1 912 1 chr5B.!!$F1 911
6 TraesCS6B01G128500 chr5B 664375587 664380088 4501 True 668.333333 1539 84.656000 909 3393 3 chr5B.!!$R2 2484
7 TraesCS6B01G128500 chr3B 367840083 367840994 911 True 1568.000000 1568 97.697000 1 912 1 chr3B.!!$R1 911
8 TraesCS6B01G128500 chr3B 178258557 178259467 910 False 1563.000000 1563 97.590000 1 913 1 chr3B.!!$F3 912
9 TraesCS6B01G128500 chr2B 214824733 214825645 912 True 1565.000000 1565 97.590000 1 913 1 chr2B.!!$R1 912
10 TraesCS6B01G128500 chr1B 141118971 141119884 913 False 1554.000000 1554 97.374000 1 913 1 chr1B.!!$F1 912
11 TraesCS6B01G128500 chr1B 316257771 316258682 911 True 1552.000000 1552 97.368000 1 912 1 chr1B.!!$R1 911
12 TraesCS6B01G128500 chr1B 402110554 402111469 915 True 1537.000000 1537 96.947000 1 916 1 chr1B.!!$R2 915
13 TraesCS6B01G128500 chr1B 645708239 645708798 559 False 294.000000 294 76.897000 2448 3010 1 chr1B.!!$F2 562
14 TraesCS6B01G128500 chr4B 644324174 644325084 910 True 1541.000000 1541 97.152000 1 913 1 chr4B.!!$R1 912
15 TraesCS6B01G128500 chrUn 62647021 62650385 3364 False 626.500000 1138 85.058000 922 2820 2 chrUn.!!$F2 1898
16 TraesCS6B01G128500 chr7B 736137396 736141027 3631 False 613.500000 1090 85.834000 925 2820 2 chr7B.!!$F1 1895
17 TraesCS6B01G128500 chr5D 527572232 527577382 5150 True 512.500000 1086 84.911750 909 3393 4 chr5D.!!$R2 2484
18 TraesCS6B01G128500 chr5D 527601795 527606987 5192 True 512.500000 1086 84.911750 909 3393 4 chr5D.!!$R3 2484
19 TraesCS6B01G128500 chr1A 576352308 576355375 3067 True 342.333333 719 87.385667 928 3146 3 chr1A.!!$R2 2218

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
937 942 1.352352 CCAGTGGACCTGTTCCTCAAT 59.648 52.381 1.68 0.00 46.10 2.57 F
1290 2865 0.035881 ATCCATCCGCTATGCACTGG 59.964 55.000 0.00 0.00 33.92 4.00 F
1336 2911 0.036388 GCCCAAACCATCTCAGACGA 60.036 55.000 0.00 0.00 0.00 4.20 F
2421 5203 0.320697 GGGGTGGAGTATGGCGATAC 59.679 60.000 10.63 10.63 35.54 2.24 F
3554 6457 1.133976 GCCAGTCTGCAATATGAGGGT 60.134 52.381 0.00 0.00 0.00 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1881 4657 0.723981 GACGATGGCAGCAAGTTCTC 59.276 55.000 2.73 0.0 0.0 2.87 R
2284 5066 1.202722 ACAGATTTTGGTTCCCGTCGT 60.203 47.619 0.00 0.0 0.0 4.34 R
2596 5384 1.453379 CCGGAGAGGAGCGTAGGAA 60.453 63.158 0.00 0.0 45.0 3.36 R
3914 6820 2.918712 AGCAGAGTAAATGGGGATCG 57.081 50.000 0.00 0.0 0.0 3.69 R
5493 8433 0.031994 AAATTCTGCACGGTGGTTGC 59.968 50.000 10.60 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 98 4.379243 CAAGTCCCTGCCGTCGCT 62.379 66.667 0.00 0.00 35.36 4.93
502 504 2.280524 TGGCTGTACACGTGCACC 60.281 61.111 17.22 10.53 0.00 5.01
937 942 1.352352 CCAGTGGACCTGTTCCTCAAT 59.648 52.381 1.68 0.00 46.10 2.57
1025 1030 5.957771 ACTAGCATGGACTTTCATCCTTA 57.042 39.130 0.00 0.00 39.75 2.69
1027 1032 4.574674 AGCATGGACTTTCATCCTTACA 57.425 40.909 0.00 0.00 39.75 2.41
1029 1034 4.702131 AGCATGGACTTTCATCCTTACAAC 59.298 41.667 0.00 0.00 39.75 3.32
1030 1035 4.458989 GCATGGACTTTCATCCTTACAACA 59.541 41.667 0.00 0.00 39.75 3.33
1032 1037 6.381801 CATGGACTTTCATCCTTACAACAAC 58.618 40.000 0.00 0.00 39.75 3.32
1034 1039 5.888724 TGGACTTTCATCCTTACAACAACAA 59.111 36.000 0.00 0.00 39.75 2.83
1035 1040 6.183360 TGGACTTTCATCCTTACAACAACAAC 60.183 38.462 0.00 0.00 39.75 3.32
1036 1041 6.183360 GGACTTTCATCCTTACAACAACAACA 60.183 38.462 0.00 0.00 35.68 3.33
1037 1042 7.164230 ACTTTCATCCTTACAACAACAACAA 57.836 32.000 0.00 0.00 0.00 2.83
1038 1043 7.033185 ACTTTCATCCTTACAACAACAACAAC 58.967 34.615 0.00 0.00 0.00 3.32
1039 1044 6.516739 TTCATCCTTACAACAACAACAACA 57.483 33.333 0.00 0.00 0.00 3.33
1040 1045 6.516739 TCATCCTTACAACAACAACAACAA 57.483 33.333 0.00 0.00 0.00 2.83
1041 1046 6.326375 TCATCCTTACAACAACAACAACAAC 58.674 36.000 0.00 0.00 0.00 3.32
1042 1047 5.707242 TCCTTACAACAACAACAACAACA 57.293 34.783 0.00 0.00 0.00 3.33
1043 1048 6.085555 TCCTTACAACAACAACAACAACAA 57.914 33.333 0.00 0.00 0.00 2.83
1044 1049 5.921408 TCCTTACAACAACAACAACAACAAC 59.079 36.000 0.00 0.00 0.00 3.32
1046 1051 6.201044 CCTTACAACAACAACAACAACAACAA 59.799 34.615 0.00 0.00 0.00 2.83
1047 1052 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
1048 1053 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
1056 1663 3.496507 ACAACAACAACAACAACAAAGCC 59.503 39.130 0.00 0.00 0.00 4.35
1060 1667 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
1061 1668 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
1065 1672 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
1066 1673 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
1067 1674 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
1068 1675 3.636764 ACAACAAAGCCTTTAGTCCCAAG 59.363 43.478 0.00 0.00 0.00 3.61
1069 1676 2.239400 ACAAAGCCTTTAGTCCCAAGC 58.761 47.619 0.00 0.00 0.00 4.01
1072 1679 2.206576 AGCCTTTAGTCCCAAGCAAG 57.793 50.000 0.00 0.00 0.00 4.01
1073 1680 1.425448 AGCCTTTAGTCCCAAGCAAGT 59.575 47.619 0.00 0.00 0.00 3.16
1075 1682 2.029918 GCCTTTAGTCCCAAGCAAGTTG 60.030 50.000 0.00 0.00 35.71 3.16
1085 1692 3.695830 CAAGCAAGTTGGGGTAGACTA 57.304 47.619 4.75 0.00 31.82 2.59
1088 1695 3.100671 AGCAAGTTGGGGTAGACTAGAG 58.899 50.000 4.75 0.00 0.00 2.43
1089 1696 2.168728 GCAAGTTGGGGTAGACTAGAGG 59.831 54.545 4.75 0.00 0.00 3.69
1111 1718 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
1115 2052 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
1118 2055 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
1121 2058 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
1129 2066 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
1135 2072 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
1138 2075 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
1140 2077 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
1141 2078 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
1144 2081 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
1145 2082 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
1146 2083 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
1147 2084 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
1148 2085 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
1152 2089 1.683943 TGGATAGCAAGCTTCCATGC 58.316 50.000 16.61 0.00 42.87 4.06
1153 2090 1.064537 TGGATAGCAAGCTTCCATGCA 60.065 47.619 16.61 6.28 44.95 3.96
1155 2092 1.336125 GATAGCAAGCTTCCATGCACC 59.664 52.381 10.57 0.00 44.95 5.01
1156 2093 0.680921 TAGCAAGCTTCCATGCACCC 60.681 55.000 10.57 0.00 44.95 4.61
1157 2094 3.010413 GCAAGCTTCCATGCACCCC 62.010 63.158 0.00 0.00 42.12 4.95
1160 2097 2.036256 GCTTCCATGCACCCCTGT 59.964 61.111 0.00 0.00 0.00 4.00
1161 2098 2.048603 GCTTCCATGCACCCCTGTC 61.049 63.158 0.00 0.00 0.00 3.51
1162 2099 1.379044 CTTCCATGCACCCCTGTCC 60.379 63.158 0.00 0.00 0.00 4.02
1163 2100 2.141011 CTTCCATGCACCCCTGTCCA 62.141 60.000 0.00 0.00 0.00 4.02
1164 2101 1.508667 TTCCATGCACCCCTGTCCAT 61.509 55.000 0.00 0.00 0.00 3.41
1165 2102 0.623031 TCCATGCACCCCTGTCCATA 60.623 55.000 0.00 0.00 0.00 2.74
1166 2103 0.179009 CCATGCACCCCTGTCCATAG 60.179 60.000 0.00 0.00 0.00 2.23
1167 2104 0.820891 CATGCACCCCTGTCCATAGC 60.821 60.000 0.00 0.00 0.00 2.97
1168 2105 0.990282 ATGCACCCCTGTCCATAGCT 60.990 55.000 0.00 0.00 0.00 3.32
1171 2108 0.394565 CACCCCTGTCCATAGCTAGC 59.605 60.000 6.62 6.62 0.00 3.42
1172 2109 0.266152 ACCCCTGTCCATAGCTAGCT 59.734 55.000 23.12 23.12 0.00 3.32
1173 2110 0.972883 CCCCTGTCCATAGCTAGCTC 59.027 60.000 23.26 7.00 0.00 4.09
1175 2112 2.324541 CCCTGTCCATAGCTAGCTCTT 58.675 52.381 23.26 7.47 0.00 2.85
1176 2113 2.298729 CCCTGTCCATAGCTAGCTCTTC 59.701 54.545 23.26 9.20 0.00 2.87
1178 2115 1.957177 TGTCCATAGCTAGCTCTTCGG 59.043 52.381 23.26 16.90 0.00 4.30
1179 2116 1.957877 GTCCATAGCTAGCTCTTCGGT 59.042 52.381 23.26 0.00 0.00 4.69
1180 2117 1.957177 TCCATAGCTAGCTCTTCGGTG 59.043 52.381 23.26 11.17 0.00 4.94
1183 2120 3.759086 CCATAGCTAGCTCTTCGGTGATA 59.241 47.826 23.26 0.00 0.00 2.15
1185 2122 1.957877 AGCTAGCTCTTCGGTGATACC 59.042 52.381 12.68 0.00 34.05 2.73
1186 2123 1.000052 GCTAGCTCTTCGGTGATACCC 60.000 57.143 7.70 0.00 33.75 3.69
1187 2124 1.614413 CTAGCTCTTCGGTGATACCCC 59.386 57.143 0.00 0.00 33.75 4.95
1188 2125 0.325296 AGCTCTTCGGTGATACCCCA 60.325 55.000 0.00 0.00 33.75 4.96
1189 2126 0.539986 GCTCTTCGGTGATACCCCAA 59.460 55.000 0.00 0.00 33.75 4.12
1202 2157 1.290134 ACCCCAATCCTTCAGGTCTC 58.710 55.000 0.00 0.00 36.34 3.36
1204 2159 1.488393 CCCCAATCCTTCAGGTCTCTC 59.512 57.143 0.00 0.00 36.34 3.20
1208 2163 4.471386 CCCAATCCTTCAGGTCTCTCTTAA 59.529 45.833 0.00 0.00 36.34 1.85
1210 2165 4.993029 ATCCTTCAGGTCTCTCTTAACG 57.007 45.455 0.00 0.00 36.34 3.18
1213 2168 3.119424 CCTTCAGGTCTCTCTTAACGGAC 60.119 52.174 0.00 0.00 0.00 4.79
1215 2170 3.345414 TCAGGTCTCTCTTAACGGACTC 58.655 50.000 0.00 0.00 0.00 3.36
1217 2172 2.309458 AGGTCTCTCTTAACGGACTCCT 59.691 50.000 0.00 0.00 0.00 3.69
1218 2173 2.684374 GGTCTCTCTTAACGGACTCCTC 59.316 54.545 0.00 0.00 0.00 3.71
1219 2174 2.684374 GTCTCTCTTAACGGACTCCTCC 59.316 54.545 0.00 0.00 0.00 4.30
1220 2175 2.025898 CTCTCTTAACGGACTCCTCCC 58.974 57.143 0.00 0.00 31.93 4.30
1221 2176 1.356738 TCTCTTAACGGACTCCTCCCA 59.643 52.381 0.00 0.00 31.93 4.37
1223 2178 2.101582 CTCTTAACGGACTCCTCCCATG 59.898 54.545 0.00 0.00 31.93 3.66
1224 2179 1.831736 CTTAACGGACTCCTCCCATGT 59.168 52.381 0.00 0.00 31.93 3.21
1226 2181 0.544357 AACGGACTCCTCCCATGTCA 60.544 55.000 0.00 0.00 31.93 3.58
1227 2182 0.544357 ACGGACTCCTCCCATGTCAA 60.544 55.000 0.00 0.00 31.93 3.18
1231 2186 3.282885 GGACTCCTCCCATGTCAAATTC 58.717 50.000 0.00 0.00 32.84 2.17
1232 2187 2.939103 GACTCCTCCCATGTCAAATTCG 59.061 50.000 0.00 0.00 0.00 3.34
1234 2189 1.633432 TCCTCCCATGTCAAATTCGGT 59.367 47.619 0.00 0.00 0.00 4.69
1235 2190 2.017049 CCTCCCATGTCAAATTCGGTC 58.983 52.381 0.00 0.00 0.00 4.79
1236 2191 2.356125 CCTCCCATGTCAAATTCGGTCT 60.356 50.000 0.00 0.00 0.00 3.85
1237 2192 3.118408 CCTCCCATGTCAAATTCGGTCTA 60.118 47.826 0.00 0.00 0.00 2.59
1239 2194 2.943033 CCCATGTCAAATTCGGTCTACC 59.057 50.000 0.00 0.00 0.00 3.18
1240 2195 2.943033 CCATGTCAAATTCGGTCTACCC 59.057 50.000 0.00 0.00 0.00 3.69
1249 2204 2.838693 GGTCTACCCCGCCCTCTC 60.839 72.222 0.00 0.00 0.00 3.20
1250 2205 2.279408 GTCTACCCCGCCCTCTCT 59.721 66.667 0.00 0.00 0.00 3.10
1251 2206 1.381463 GTCTACCCCGCCCTCTCTT 60.381 63.158 0.00 0.00 0.00 2.85
1252 2207 1.381327 TCTACCCCGCCCTCTCTTG 60.381 63.158 0.00 0.00 0.00 3.02
1254 2209 1.677637 CTACCCCGCCCTCTCTTGAC 61.678 65.000 0.00 0.00 0.00 3.18
1257 2212 1.604378 CCCGCCCTCTCTTGACATT 59.396 57.895 0.00 0.00 0.00 2.71
1259 2214 0.539051 CCGCCCTCTCTTGACATTCT 59.461 55.000 0.00 0.00 0.00 2.40
1260 2215 1.472376 CCGCCCTCTCTTGACATTCTC 60.472 57.143 0.00 0.00 0.00 2.87
1261 2216 1.472376 CGCCCTCTCTTGACATTCTCC 60.472 57.143 0.00 0.00 0.00 3.71
1262 2217 1.472376 GCCCTCTCTTGACATTCTCCG 60.472 57.143 0.00 0.00 0.00 4.63
1263 2218 1.472376 CCCTCTCTTGACATTCTCCGC 60.472 57.143 0.00 0.00 0.00 5.54
1264 2219 1.205655 CCTCTCTTGACATTCTCCGCA 59.794 52.381 0.00 0.00 0.00 5.69
1265 2220 2.266554 CTCTCTTGACATTCTCCGCAC 58.733 52.381 0.00 0.00 0.00 5.34
1266 2221 0.994995 CTCTTGACATTCTCCGCACG 59.005 55.000 0.00 0.00 0.00 5.34
1270 2225 0.602638 TGACATTCTCCGCACGCTTT 60.603 50.000 0.00 0.00 0.00 3.51
1271 2226 1.337354 TGACATTCTCCGCACGCTTTA 60.337 47.619 0.00 0.00 0.00 1.85
1277 2232 0.861837 CTCCGCACGCTTTATCCATC 59.138 55.000 0.00 0.00 0.00 3.51
1278 2233 0.531974 TCCGCACGCTTTATCCATCC 60.532 55.000 0.00 0.00 0.00 3.51
1282 2237 1.872237 GCACGCTTTATCCATCCGCTA 60.872 52.381 0.00 0.00 0.00 4.26
1287 2862 2.160417 GCTTTATCCATCCGCTATGCAC 59.840 50.000 0.00 0.00 33.92 4.57
1290 2865 0.035881 ATCCATCCGCTATGCACTGG 59.964 55.000 0.00 0.00 33.92 4.00
1295 2870 1.153289 CCGCTATGCACTGGAGCTT 60.153 57.895 9.31 0.00 33.91 3.74
1296 2871 0.745845 CCGCTATGCACTGGAGCTTT 60.746 55.000 9.31 0.00 33.91 3.51
1304 2879 1.075659 ACTGGAGCTTTTGGAGGCC 59.924 57.895 0.00 0.00 0.00 5.19
1307 2882 1.075659 GGAGCTTTTGGAGGCCTGT 59.924 57.895 12.00 0.00 0.00 4.00
1308 2883 1.246737 GGAGCTTTTGGAGGCCTGTG 61.247 60.000 12.00 0.00 0.00 3.66
1309 2884 1.871126 GAGCTTTTGGAGGCCTGTGC 61.871 60.000 12.00 4.97 0.00 4.57
1310 2885 1.905354 GCTTTTGGAGGCCTGTGCT 60.905 57.895 12.00 0.00 37.74 4.40
1311 2886 1.962144 CTTTTGGAGGCCTGTGCTG 59.038 57.895 12.00 0.00 37.74 4.41
1314 2889 1.792757 TTTGGAGGCCTGTGCTGGAT 61.793 55.000 12.00 0.00 37.74 3.41
1315 2890 0.913934 TTGGAGGCCTGTGCTGGATA 60.914 55.000 12.00 0.00 37.74 2.59
1317 2892 0.250640 GGAGGCCTGTGCTGGATATG 60.251 60.000 12.00 0.00 37.74 1.78
1319 2894 1.900498 GGCCTGTGCTGGATATGCC 60.900 63.158 0.00 0.00 37.74 4.40
1320 2895 1.900498 GCCTGTGCTGGATATGCCC 60.900 63.158 0.00 0.00 34.97 5.36
1321 2896 1.533219 CCTGTGCTGGATATGCCCA 59.467 57.895 0.00 0.00 34.97 5.36
1323 2898 1.685803 CCTGTGCTGGATATGCCCAAA 60.686 52.381 0.00 0.00 35.47 3.28
1326 2901 0.334335 TGCTGGATATGCCCAAACCA 59.666 50.000 0.00 0.00 35.47 3.67
1327 2902 1.063038 TGCTGGATATGCCCAAACCAT 60.063 47.619 0.00 0.00 35.47 3.55
1328 2903 1.615392 GCTGGATATGCCCAAACCATC 59.385 52.381 0.00 0.00 35.47 3.51
1330 2905 3.152341 CTGGATATGCCCAAACCATCTC 58.848 50.000 0.00 0.00 35.47 2.75
1331 2906 2.513317 TGGATATGCCCAAACCATCTCA 59.487 45.455 0.00 0.00 34.97 3.27
1332 2907 3.152341 GGATATGCCCAAACCATCTCAG 58.848 50.000 0.00 0.00 0.00 3.35
1333 2908 3.181440 GGATATGCCCAAACCATCTCAGA 60.181 47.826 0.00 0.00 0.00 3.27
1334 2909 2.134789 ATGCCCAAACCATCTCAGAC 57.865 50.000 0.00 0.00 0.00 3.51
1335 2910 0.321564 TGCCCAAACCATCTCAGACG 60.322 55.000 0.00 0.00 0.00 4.18
1336 2911 0.036388 GCCCAAACCATCTCAGACGA 60.036 55.000 0.00 0.00 0.00 4.20
1338 2913 2.283298 CCCAAACCATCTCAGACGATG 58.717 52.381 0.00 0.00 40.32 3.84
1339 2914 2.355108 CCCAAACCATCTCAGACGATGT 60.355 50.000 0.00 0.00 39.26 3.06
1340 2915 3.338249 CCAAACCATCTCAGACGATGTT 58.662 45.455 0.00 0.00 39.26 2.71
1499 3566 7.397476 GGAAGTTCTAAATCCCCAGAAATTTCT 59.603 37.037 15.11 15.11 38.70 2.52
1566 3636 6.424812 GGCCCATCTTATTATTGATTGTTTGC 59.575 38.462 0.00 0.00 0.00 3.68
1780 3879 2.046285 CGCCTTCCTCCGCCATTTT 61.046 57.895 0.00 0.00 0.00 1.82
1794 3893 2.268076 ATTTTTGCGAGCGCCACCT 61.268 52.632 12.70 0.00 41.09 4.00
1825 4601 1.405821 CTTGGCTTCTACGTCGAGGAT 59.594 52.381 12.85 0.00 0.00 3.24
1855 4631 7.678947 AGATCATAAAATGGCTTCTATTCGG 57.321 36.000 0.00 0.00 0.00 4.30
1937 4713 4.382320 GTTGGGACGCCTACCGCA 62.382 66.667 0.00 0.00 41.76 5.69
2131 4913 3.740321 GCACGATGAATGATCTCTTCTCC 59.260 47.826 0.00 2.50 0.00 3.71
2284 5066 0.907486 CAGACCAGCTCCTTGATCCA 59.093 55.000 0.00 0.00 0.00 3.41
2421 5203 0.320697 GGGGTGGAGTATGGCGATAC 59.679 60.000 10.63 10.63 35.54 2.24
2557 5345 3.190327 CCATTTGTTTGCGTGAGATGGTA 59.810 43.478 0.00 0.00 0.00 3.25
2590 5378 3.245122 GGATTCCAGGTTACAGGGTTGAA 60.245 47.826 0.00 0.00 0.00 2.69
2596 5384 4.324563 CCAGGTTACAGGGTTGAAGATGAT 60.325 45.833 0.00 0.00 0.00 2.45
3505 6401 7.310609 CCCTTTGGATGATCAGGTATTTGTTTT 60.311 37.037 0.09 0.00 0.00 2.43
3507 6403 9.573133 CTTTGGATGATCAGGTATTTGTTTTAC 57.427 33.333 0.09 0.00 0.00 2.01
3554 6457 1.133976 GCCAGTCTGCAATATGAGGGT 60.134 52.381 0.00 0.00 0.00 4.34
3990 6896 5.010820 GGTGTCAGTAGTTAGTTTCAGTCCT 59.989 44.000 0.00 0.00 0.00 3.85
4028 6934 2.476619 CAGTTCCGTCACTTAGCTGTTG 59.523 50.000 0.00 0.00 0.00 3.33
4054 6960 7.661437 GTCAGTTATATCATTGGCCTATGACAA 59.339 37.037 28.63 20.59 37.36 3.18
4250 7156 9.990868 ATGGTATAAATACTCCCTTTGTTTTCT 57.009 29.630 0.46 0.00 33.81 2.52
4251 7157 9.457436 TGGTATAAATACTCCCTTTGTTTTCTC 57.543 33.333 0.46 0.00 33.81 2.87
4252 7158 9.682465 GGTATAAATACTCCCTTTGTTTTCTCT 57.318 33.333 0.46 0.00 33.81 3.10
4268 7174 5.970501 TTTCTCTCCCTTTTATCCTACCC 57.029 43.478 0.00 0.00 0.00 3.69
4370 7276 3.006323 CCAGCATCTGGTCTATGTACCTC 59.994 52.174 4.74 0.00 45.82 3.85
4534 7440 4.509970 TGGAGCAATTATCGTTTATCGGTG 59.490 41.667 0.00 0.00 40.32 4.94
4568 7474 4.609947 TGTTCATGTCAACTTGCAATGTC 58.390 39.130 0.00 0.00 0.00 3.06
4623 7529 7.072030 GCACTTTTGTCATGTTCTACTAACTG 58.928 38.462 0.00 0.00 0.00 3.16
4630 7536 3.570926 TGTTCTACTAACTGCCTCGTG 57.429 47.619 0.00 0.00 0.00 4.35
4631 7537 2.260481 GTTCTACTAACTGCCTCGTGC 58.740 52.381 0.00 0.00 41.77 5.34
4690 7596 7.806690 AGTCATCACACATGTTTAATACACAC 58.193 34.615 0.00 0.00 40.19 3.82
4784 7690 5.447573 CAAAGCTCAAGTTAGAAGAGTTGC 58.552 41.667 0.00 0.00 31.49 4.17
4846 7752 2.229062 TGCAAGTGTACGAAGAGGAGAG 59.771 50.000 0.00 0.00 0.00 3.20
4865 7771 3.118482 AGAGGATTGCACAGTAGTCATGG 60.118 47.826 0.00 0.00 0.00 3.66
4960 7867 7.337942 GGTTGAAGAACATGATAAGAAGGATGT 59.662 37.037 0.00 0.00 33.27 3.06
5017 7924 4.851843 TGATCAGATTTTCAGTGGCATCT 58.148 39.130 0.00 0.00 0.00 2.90
5018 7925 4.638865 TGATCAGATTTTCAGTGGCATCTG 59.361 41.667 15.62 15.62 42.75 2.90
5019 7926 2.751259 TCAGATTTTCAGTGGCATCTGC 59.249 45.455 16.41 0.00 41.64 4.26
5111 8049 8.020861 TGTTGAATTTTAGATCATTGCTTTGC 57.979 30.769 0.00 0.00 0.00 3.68
5129 8067 3.394674 TGCGAATAACAACTCTGTCCA 57.605 42.857 0.00 0.00 33.45 4.02
5215 8153 7.475771 TTGTGAATAACAATTCTGCCAAAAC 57.524 32.000 0.35 0.00 43.96 2.43
5234 8172 7.702348 GCCAAAACTAGATGGATTGAAACATAC 59.298 37.037 15.14 0.00 39.12 2.39
5236 8174 9.994432 CAAAACTAGATGGATTGAAACATACTC 57.006 33.333 0.00 0.00 0.00 2.59
5237 8175 8.738645 AAACTAGATGGATTGAAACATACTCC 57.261 34.615 0.00 0.00 0.00 3.85
5250 8190 6.597672 TGAAACATACTCCCATCACAATACAC 59.402 38.462 0.00 0.00 0.00 2.90
5254 8194 4.386867 ACTCCCATCACAATACACTACG 57.613 45.455 0.00 0.00 0.00 3.51
5256 8196 4.098044 ACTCCCATCACAATACACTACGAG 59.902 45.833 0.00 0.00 0.00 4.18
5257 8197 3.123804 CCCATCACAATACACTACGAGC 58.876 50.000 0.00 0.00 0.00 5.03
5258 8198 3.123804 CCATCACAATACACTACGAGCC 58.876 50.000 0.00 0.00 0.00 4.70
5259 8199 2.953466 TCACAATACACTACGAGCCC 57.047 50.000 0.00 0.00 0.00 5.19
5261 8201 2.165641 TCACAATACACTACGAGCCCAG 59.834 50.000 0.00 0.00 0.00 4.45
5262 8202 2.094182 CACAATACACTACGAGCCCAGT 60.094 50.000 0.00 0.00 0.00 4.00
5263 8203 3.129813 CACAATACACTACGAGCCCAGTA 59.870 47.826 0.00 0.00 0.00 2.74
5264 8204 3.958798 ACAATACACTACGAGCCCAGTAT 59.041 43.478 0.00 0.00 0.00 2.12
5265 8205 4.202121 ACAATACACTACGAGCCCAGTATG 60.202 45.833 0.00 0.00 0.00 2.39
5266 8206 0.460311 ACACTACGAGCCCAGTATGC 59.540 55.000 0.00 0.00 31.97 3.14
5267 8207 0.459899 CACTACGAGCCCAGTATGCA 59.540 55.000 0.00 0.00 31.97 3.96
5268 8208 1.134818 CACTACGAGCCCAGTATGCAA 60.135 52.381 0.00 0.00 31.97 4.08
5269 8209 1.553248 ACTACGAGCCCAGTATGCAAA 59.447 47.619 0.00 0.00 31.97 3.68
5270 8210 2.027561 ACTACGAGCCCAGTATGCAAAA 60.028 45.455 0.00 0.00 31.97 2.44
5271 8211 1.904287 ACGAGCCCAGTATGCAAAAA 58.096 45.000 0.00 0.00 31.97 1.94
5299 8239 1.098050 CCTCTTGGCTGTTGTATGGC 58.902 55.000 0.00 0.00 0.00 4.40
5300 8240 1.614051 CCTCTTGGCTGTTGTATGGCA 60.614 52.381 0.00 0.00 36.96 4.92
5301 8241 2.372264 CTCTTGGCTGTTGTATGGCAT 58.628 47.619 4.88 4.88 38.51 4.40
5302 8242 3.544684 CTCTTGGCTGTTGTATGGCATA 58.455 45.455 2.32 2.32 38.51 3.14
5303 8243 3.947196 CTCTTGGCTGTTGTATGGCATAA 59.053 43.478 9.14 0.00 38.51 1.90
5304 8244 3.694072 TCTTGGCTGTTGTATGGCATAAC 59.306 43.478 9.14 7.47 38.51 1.89
5305 8245 3.364460 TGGCTGTTGTATGGCATAACT 57.636 42.857 9.14 0.00 33.80 2.24
5306 8246 4.495690 TGGCTGTTGTATGGCATAACTA 57.504 40.909 9.14 0.00 33.80 2.24
5307 8247 4.849518 TGGCTGTTGTATGGCATAACTAA 58.150 39.130 9.14 2.62 33.80 2.24
5308 8248 4.881273 TGGCTGTTGTATGGCATAACTAAG 59.119 41.667 9.14 6.48 33.80 2.18
5309 8249 4.881850 GGCTGTTGTATGGCATAACTAAGT 59.118 41.667 9.14 0.00 0.00 2.24
5310 8250 5.357032 GGCTGTTGTATGGCATAACTAAGTT 59.643 40.000 9.14 0.00 0.00 2.66
5311 8251 6.127730 GGCTGTTGTATGGCATAACTAAGTTT 60.128 38.462 9.14 0.00 0.00 2.66
5312 8252 7.312899 GCTGTTGTATGGCATAACTAAGTTTT 58.687 34.615 9.14 0.00 0.00 2.43
5313 8253 7.484959 GCTGTTGTATGGCATAACTAAGTTTTC 59.515 37.037 9.14 0.00 0.00 2.29
5314 8254 8.630054 TGTTGTATGGCATAACTAAGTTTTCT 57.370 30.769 9.14 0.00 0.00 2.52
5315 8255 8.726988 TGTTGTATGGCATAACTAAGTTTTCTC 58.273 33.333 9.14 0.00 0.00 2.87
5316 8256 8.726988 GTTGTATGGCATAACTAAGTTTTCTCA 58.273 33.333 9.14 0.00 0.00 3.27
5317 8257 8.263940 TGTATGGCATAACTAAGTTTTCTCAC 57.736 34.615 9.14 0.00 0.00 3.51
5318 8258 7.880713 TGTATGGCATAACTAAGTTTTCTCACA 59.119 33.333 9.14 0.00 0.00 3.58
5319 8259 7.944729 ATGGCATAACTAAGTTTTCTCACAT 57.055 32.000 0.00 0.00 0.00 3.21
5320 8260 7.759489 TGGCATAACTAAGTTTTCTCACATT 57.241 32.000 0.00 0.00 0.00 2.71
5321 8261 8.856153 TGGCATAACTAAGTTTTCTCACATTA 57.144 30.769 0.00 0.00 0.00 1.90
5322 8262 8.946085 TGGCATAACTAAGTTTTCTCACATTAG 58.054 33.333 0.00 0.00 0.00 1.73
5323 8263 7.910683 GGCATAACTAAGTTTTCTCACATTAGC 59.089 37.037 0.00 0.00 0.00 3.09
5324 8264 8.450964 GCATAACTAAGTTTTCTCACATTAGCA 58.549 33.333 0.00 0.00 0.00 3.49
5325 8265 9.760660 CATAACTAAGTTTTCTCACATTAGCAC 57.239 33.333 0.00 0.00 0.00 4.40
5326 8266 6.803154 ACTAAGTTTTCTCACATTAGCACC 57.197 37.500 0.00 0.00 0.00 5.01
5327 8267 6.534634 ACTAAGTTTTCTCACATTAGCACCT 58.465 36.000 0.00 0.00 0.00 4.00
5328 8268 5.948992 AAGTTTTCTCACATTAGCACCTC 57.051 39.130 0.00 0.00 0.00 3.85
5329 8269 5.234466 AGTTTTCTCACATTAGCACCTCT 57.766 39.130 0.00 0.00 0.00 3.69
5330 8270 4.999950 AGTTTTCTCACATTAGCACCTCTG 59.000 41.667 0.00 0.00 0.00 3.35
5331 8271 4.623932 TTTCTCACATTAGCACCTCTGT 57.376 40.909 0.00 0.00 0.00 3.41
5332 8272 3.876274 TCTCACATTAGCACCTCTGTC 57.124 47.619 0.00 0.00 0.00 3.51
5333 8273 3.165071 TCTCACATTAGCACCTCTGTCA 58.835 45.455 0.00 0.00 0.00 3.58
5334 8274 3.056536 TCTCACATTAGCACCTCTGTCAC 60.057 47.826 0.00 0.00 0.00 3.67
5335 8275 2.028112 TCACATTAGCACCTCTGTCACC 60.028 50.000 0.00 0.00 0.00 4.02
5336 8276 1.977854 ACATTAGCACCTCTGTCACCA 59.022 47.619 0.00 0.00 0.00 4.17
5337 8277 2.027745 ACATTAGCACCTCTGTCACCAG 60.028 50.000 0.00 0.00 40.25 4.00
5351 8291 1.211703 TCACCAGTCACCAAGCAAAGA 59.788 47.619 0.00 0.00 0.00 2.52
5363 8303 6.534793 TCACCAAGCAAAGAAAATCAAAACTC 59.465 34.615 0.00 0.00 0.00 3.01
5461 8401 2.125512 CTTCTCGGGCGTCAAGGG 60.126 66.667 0.00 0.00 0.00 3.95
5468 8408 3.284449 GGCGTCAAGGGCGTGTTT 61.284 61.111 0.00 0.00 0.00 2.83
5469 8409 2.051345 GCGTCAAGGGCGTGTTTG 60.051 61.111 0.00 0.00 0.00 2.93
5470 8410 2.637025 CGTCAAGGGCGTGTTTGG 59.363 61.111 0.00 0.00 0.00 3.28
5471 8411 2.184167 CGTCAAGGGCGTGTTTGGT 61.184 57.895 0.00 0.00 0.00 3.67
5472 8412 1.720694 CGTCAAGGGCGTGTTTGGTT 61.721 55.000 0.00 0.00 0.00 3.67
5473 8413 0.030235 GTCAAGGGCGTGTTTGGTTC 59.970 55.000 0.00 0.00 0.00 3.62
5474 8414 1.104577 TCAAGGGCGTGTTTGGTTCC 61.105 55.000 0.00 0.00 0.00 3.62
5475 8415 1.830847 AAGGGCGTGTTTGGTTCCC 60.831 57.895 0.00 0.00 37.24 3.97
5476 8416 2.203437 GGGCGTGTTTGGTTCCCT 60.203 61.111 0.00 0.00 34.19 4.20
5477 8417 2.561037 GGGCGTGTTTGGTTCCCTG 61.561 63.158 0.00 0.00 34.19 4.45
5478 8418 1.826487 GGCGTGTTTGGTTCCCTGT 60.826 57.895 0.00 0.00 0.00 4.00
5479 8419 1.358759 GCGTGTTTGGTTCCCTGTG 59.641 57.895 0.00 0.00 0.00 3.66
5480 8420 1.381165 GCGTGTTTGGTTCCCTGTGT 61.381 55.000 0.00 0.00 0.00 3.72
5481 8421 1.099689 CGTGTTTGGTTCCCTGTGTT 58.900 50.000 0.00 0.00 0.00 3.32
5482 8422 1.202245 CGTGTTTGGTTCCCTGTGTTG 60.202 52.381 0.00 0.00 0.00 3.33
5483 8423 0.820871 TGTTTGGTTCCCTGTGTTGC 59.179 50.000 0.00 0.00 0.00 4.17
5484 8424 0.820871 GTTTGGTTCCCTGTGTTGCA 59.179 50.000 0.00 0.00 0.00 4.08
5485 8425 1.412343 GTTTGGTTCCCTGTGTTGCAT 59.588 47.619 0.00 0.00 0.00 3.96
5486 8426 1.039068 TTGGTTCCCTGTGTTGCATG 58.961 50.000 0.00 0.00 0.00 4.06
5487 8427 0.106268 TGGTTCCCTGTGTTGCATGT 60.106 50.000 0.00 0.00 0.00 3.21
5488 8428 0.314935 GGTTCCCTGTGTTGCATGTG 59.685 55.000 0.00 0.00 0.00 3.21
5489 8429 0.314935 GTTCCCTGTGTTGCATGTGG 59.685 55.000 0.00 0.00 0.00 4.17
5490 8430 1.462731 TTCCCTGTGTTGCATGTGGC 61.463 55.000 0.00 0.00 45.13 5.01
5491 8431 1.904865 CCCTGTGTTGCATGTGGCT 60.905 57.895 0.00 0.00 45.15 4.75
5492 8432 1.582968 CCTGTGTTGCATGTGGCTC 59.417 57.895 0.00 0.00 45.15 4.70
5493 8433 1.208358 CTGTGTTGCATGTGGCTCG 59.792 57.895 0.00 0.00 45.15 5.03
5494 8434 2.126734 GTGTTGCATGTGGCTCGC 60.127 61.111 0.00 0.00 45.15 5.03
5495 8435 2.594013 TGTTGCATGTGGCTCGCA 60.594 55.556 0.00 0.00 45.15 5.10
5496 8436 2.192187 TGTTGCATGTGGCTCGCAA 61.192 52.632 0.00 0.00 45.15 4.85
5497 8437 2.644418 TTGCATGTGGCTCGCAAC 59.356 55.556 0.00 0.00 45.15 4.17
5498 8438 2.918345 TTGCATGTGGCTCGCAACC 61.918 57.895 0.00 0.00 45.15 3.77
5499 8439 3.364441 GCATGTGGCTCGCAACCA 61.364 61.111 0.00 0.00 40.25 3.67
5507 8447 3.716006 CTCGCAACCACCGTGCAG 61.716 66.667 0.00 0.00 42.33 4.41
5508 8448 4.228567 TCGCAACCACCGTGCAGA 62.229 61.111 0.00 0.00 42.33 4.26
5509 8449 3.276091 CGCAACCACCGTGCAGAA 61.276 61.111 0.00 0.00 42.33 3.02
5510 8450 2.616330 CGCAACCACCGTGCAGAAT 61.616 57.895 0.00 0.00 42.33 2.40
5511 8451 1.659794 GCAACCACCGTGCAGAATT 59.340 52.632 0.00 0.00 41.80 2.17
5512 8452 0.031994 GCAACCACCGTGCAGAATTT 59.968 50.000 0.00 0.00 41.80 1.82
5513 8453 1.769733 CAACCACCGTGCAGAATTTG 58.230 50.000 0.00 0.00 0.00 2.32
5514 8454 0.673437 AACCACCGTGCAGAATTTGG 59.327 50.000 0.00 0.00 0.00 3.28
5515 8455 1.178534 ACCACCGTGCAGAATTTGGG 61.179 55.000 0.00 0.00 0.00 4.12
5516 8456 1.178534 CCACCGTGCAGAATTTGGGT 61.179 55.000 0.00 0.00 0.00 4.51
5517 8457 0.673437 CACCGTGCAGAATTTGGGTT 59.327 50.000 0.00 0.00 0.00 4.11
5518 8458 0.673437 ACCGTGCAGAATTTGGGTTG 59.327 50.000 0.00 0.00 0.00 3.77
5519 8459 0.673437 CCGTGCAGAATTTGGGTTGT 59.327 50.000 0.00 0.00 0.00 3.32
5520 8460 1.068434 CCGTGCAGAATTTGGGTTGTT 59.932 47.619 0.00 0.00 0.00 2.83
5521 8461 2.482839 CCGTGCAGAATTTGGGTTGTTT 60.483 45.455 0.00 0.00 0.00 2.83
5522 8462 2.539274 CGTGCAGAATTTGGGTTGTTTG 59.461 45.455 0.00 0.00 0.00 2.93
5523 8463 2.871633 GTGCAGAATTTGGGTTGTTTGG 59.128 45.455 0.00 0.00 0.00 3.28
5524 8464 2.503356 TGCAGAATTTGGGTTGTTTGGT 59.497 40.909 0.00 0.00 0.00 3.67
5525 8465 2.871633 GCAGAATTTGGGTTGTTTGGTG 59.128 45.455 0.00 0.00 0.00 4.17
5526 8466 3.681313 GCAGAATTTGGGTTGTTTGGTGT 60.681 43.478 0.00 0.00 0.00 4.16
5527 8467 3.870419 CAGAATTTGGGTTGTTTGGTGTG 59.130 43.478 0.00 0.00 0.00 3.82
5528 8468 2.323968 ATTTGGGTTGTTTGGTGTGC 57.676 45.000 0.00 0.00 0.00 4.57
5529 8469 1.270907 TTTGGGTTGTTTGGTGTGCT 58.729 45.000 0.00 0.00 0.00 4.40
5530 8470 0.534412 TTGGGTTGTTTGGTGTGCTG 59.466 50.000 0.00 0.00 0.00 4.41
5531 8471 1.227234 GGGTTGTTTGGTGTGCTGC 60.227 57.895 0.00 0.00 0.00 5.25
5532 8472 1.515020 GGTTGTTTGGTGTGCTGCA 59.485 52.632 0.00 0.00 0.00 4.41
5533 8473 0.104671 GGTTGTTTGGTGTGCTGCAT 59.895 50.000 5.27 0.00 0.00 3.96
5534 8474 1.210870 GTTGTTTGGTGTGCTGCATG 58.789 50.000 5.27 0.00 0.00 4.06
5535 8475 0.104487 TTGTTTGGTGTGCTGCATGG 59.896 50.000 5.27 0.00 0.00 3.66
5536 8476 1.005867 GTTTGGTGTGCTGCATGGG 60.006 57.895 5.27 0.00 0.00 4.00
5537 8477 2.870119 TTTGGTGTGCTGCATGGGC 61.870 57.895 5.27 0.00 41.68 5.36
5538 8478 3.813606 TTGGTGTGCTGCATGGGCT 62.814 57.895 5.27 0.00 41.91 5.19
5539 8479 3.446570 GGTGTGCTGCATGGGCTC 61.447 66.667 5.27 0.00 41.91 4.70
5540 8480 2.360852 GTGTGCTGCATGGGCTCT 60.361 61.111 5.27 0.00 41.91 4.09
5541 8481 1.975407 GTGTGCTGCATGGGCTCTT 60.975 57.895 5.27 0.00 41.91 2.85
5542 8482 1.676635 TGTGCTGCATGGGCTCTTC 60.677 57.895 5.27 0.00 41.91 2.87
5543 8483 2.437180 TGCTGCATGGGCTCTTCG 60.437 61.111 0.00 0.00 41.91 3.79
5544 8484 3.207669 GCTGCATGGGCTCTTCGG 61.208 66.667 0.00 0.00 41.91 4.30
5545 8485 3.207669 CTGCATGGGCTCTTCGGC 61.208 66.667 0.00 0.00 41.91 5.54
5565 8505 4.062656 GGCCCGCGGATGCAAAAA 62.063 61.111 30.73 0.00 42.97 1.94
5593 8533 2.759795 AGCCAGGCTGAGGGAAAC 59.240 61.111 15.24 0.00 37.57 2.78
5594 8534 2.747855 GCCAGGCTGAGGGAAACG 60.748 66.667 17.94 0.00 0.00 3.60
5595 8535 2.750350 CCAGGCTGAGGGAAACGT 59.250 61.111 17.94 0.00 0.00 3.99
5596 8536 1.672356 CCAGGCTGAGGGAAACGTG 60.672 63.158 17.94 0.00 0.00 4.49
5597 8537 1.672356 CAGGCTGAGGGAAACGTGG 60.672 63.158 9.42 0.00 0.00 4.94
5598 8538 2.359975 GGCTGAGGGAAACGTGGG 60.360 66.667 0.00 0.00 0.00 4.61
5599 8539 2.747686 GCTGAGGGAAACGTGGGA 59.252 61.111 0.00 0.00 0.00 4.37
5600 8540 1.072505 GCTGAGGGAAACGTGGGAA 59.927 57.895 0.00 0.00 0.00 3.97
5601 8541 0.322546 GCTGAGGGAAACGTGGGAAT 60.323 55.000 0.00 0.00 0.00 3.01
5602 8542 1.739067 CTGAGGGAAACGTGGGAATC 58.261 55.000 0.00 0.00 0.00 2.52
5603 8543 0.036765 TGAGGGAAACGTGGGAATCG 60.037 55.000 0.00 0.00 0.00 3.34
5604 8544 0.743345 GAGGGAAACGTGGGAATCGG 60.743 60.000 0.00 0.00 0.00 4.18
5605 8545 1.747745 GGGAAACGTGGGAATCGGG 60.748 63.158 0.00 0.00 0.00 5.14
5606 8546 2.404186 GGAAACGTGGGAATCGGGC 61.404 63.158 0.00 0.00 0.00 6.13
5607 8547 2.744709 AAACGTGGGAATCGGGCG 60.745 61.111 0.00 0.00 0.00 6.13
5608 8548 3.540367 AAACGTGGGAATCGGGCGT 62.540 57.895 0.00 0.00 37.38 5.68
5609 8549 2.169937 AAACGTGGGAATCGGGCGTA 62.170 55.000 0.00 0.00 35.22 4.42
5610 8550 1.963464 AACGTGGGAATCGGGCGTAT 61.963 55.000 0.00 0.00 35.22 3.06
5611 8551 1.663702 CGTGGGAATCGGGCGTATC 60.664 63.158 0.00 0.00 0.00 2.24
5612 8552 1.746517 GTGGGAATCGGGCGTATCT 59.253 57.895 0.00 0.00 0.00 1.98
5613 8553 0.319641 GTGGGAATCGGGCGTATCTC 60.320 60.000 0.00 0.00 0.00 2.75
5614 8554 1.080705 GGGAATCGGGCGTATCTCG 60.081 63.158 0.00 0.00 43.12 4.04
5623 8563 2.353607 CGTATCTCGCGTCCAGGC 60.354 66.667 5.77 0.00 0.00 4.85
5624 8564 2.835705 CGTATCTCGCGTCCAGGCT 61.836 63.158 5.77 0.00 0.00 4.58
5625 8565 1.008309 GTATCTCGCGTCCAGGCTC 60.008 63.158 5.77 0.00 0.00 4.70
5626 8566 2.543802 TATCTCGCGTCCAGGCTCG 61.544 63.158 5.77 0.38 0.00 5.03
5649 8589 2.770259 GCTCGTTCGCGTTTCTCC 59.230 61.111 5.77 0.00 42.11 3.71
5650 8590 1.733399 GCTCGTTCGCGTTTCTCCT 60.733 57.895 5.77 0.00 42.11 3.69
5651 8591 1.282930 GCTCGTTCGCGTTTCTCCTT 61.283 55.000 5.77 0.00 42.11 3.36
5652 8592 1.137513 CTCGTTCGCGTTTCTCCTTT 58.862 50.000 5.77 0.00 42.11 3.11
5653 8593 1.124477 CTCGTTCGCGTTTCTCCTTTC 59.876 52.381 5.77 0.00 42.11 2.62
5654 8594 0.163146 CGTTCGCGTTTCTCCTTTCC 59.837 55.000 5.77 0.00 35.57 3.13
5655 8595 0.516001 GTTCGCGTTTCTCCTTTCCC 59.484 55.000 5.77 0.00 0.00 3.97
5656 8596 0.604511 TTCGCGTTTCTCCTTTCCCC 60.605 55.000 5.77 0.00 0.00 4.81
5657 8597 1.003718 CGCGTTTCTCCTTTCCCCT 60.004 57.895 0.00 0.00 0.00 4.79
5658 8598 0.605589 CGCGTTTCTCCTTTCCCCTT 60.606 55.000 0.00 0.00 0.00 3.95
5659 8599 1.166129 GCGTTTCTCCTTTCCCCTTC 58.834 55.000 0.00 0.00 0.00 3.46
5660 8600 1.271434 GCGTTTCTCCTTTCCCCTTCT 60.271 52.381 0.00 0.00 0.00 2.85
5661 8601 2.427506 CGTTTCTCCTTTCCCCTTCTG 58.572 52.381 0.00 0.00 0.00 3.02
5662 8602 2.224548 CGTTTCTCCTTTCCCCTTCTGT 60.225 50.000 0.00 0.00 0.00 3.41
5663 8603 3.413327 GTTTCTCCTTTCCCCTTCTGTC 58.587 50.000 0.00 0.00 0.00 3.51
5664 8604 1.267121 TCTCCTTTCCCCTTCTGTCG 58.733 55.000 0.00 0.00 0.00 4.35
5665 8605 0.391793 CTCCTTTCCCCTTCTGTCGC 60.392 60.000 0.00 0.00 0.00 5.19
5666 8606 0.836400 TCCTTTCCCCTTCTGTCGCT 60.836 55.000 0.00 0.00 0.00 4.93
5667 8607 0.674895 CCTTTCCCCTTCTGTCGCTG 60.675 60.000 0.00 0.00 0.00 5.18
5668 8608 1.301677 CTTTCCCCTTCTGTCGCTGC 61.302 60.000 0.00 0.00 0.00 5.25
5669 8609 3.589654 TTCCCCTTCTGTCGCTGCG 62.590 63.158 17.25 17.25 0.00 5.18
5682 8622 4.218578 CTGCGCCGCATCCTCTCT 62.219 66.667 14.15 0.00 38.13 3.10
5683 8623 4.519437 TGCGCCGCATCCTCTCTG 62.519 66.667 8.16 0.00 31.71 3.35
5684 8624 4.521062 GCGCCGCATCCTCTCTGT 62.521 66.667 3.15 0.00 0.00 3.41
5685 8625 3.120105 CGCCGCATCCTCTCTGTA 58.880 61.111 0.00 0.00 0.00 2.74
5686 8626 1.007964 CGCCGCATCCTCTCTGTAG 60.008 63.158 0.00 0.00 0.00 2.74
5687 8627 1.300542 GCCGCATCCTCTCTGTAGC 60.301 63.158 0.00 0.00 0.00 3.58
5688 8628 1.365633 CCGCATCCTCTCTGTAGCC 59.634 63.158 0.00 0.00 0.00 3.93
5689 8629 1.112315 CCGCATCCTCTCTGTAGCCT 61.112 60.000 0.00 0.00 0.00 4.58
5690 8630 0.031857 CGCATCCTCTCTGTAGCCTG 59.968 60.000 0.00 0.00 0.00 4.85
5691 8631 1.118838 GCATCCTCTCTGTAGCCTGT 58.881 55.000 0.00 0.00 0.00 4.00
5692 8632 1.202510 GCATCCTCTCTGTAGCCTGTG 60.203 57.143 0.00 0.00 0.00 3.66
5693 8633 1.411977 CATCCTCTCTGTAGCCTGTGG 59.588 57.143 0.00 0.00 0.00 4.17
5704 8644 4.335647 CCTGTGGCCGCTGTCCTT 62.336 66.667 18.96 0.00 0.00 3.36
5705 8645 3.052082 CTGTGGCCGCTGTCCTTG 61.052 66.667 18.96 0.00 0.00 3.61
5706 8646 3.535629 CTGTGGCCGCTGTCCTTGA 62.536 63.158 18.96 0.00 0.00 3.02
5707 8647 2.045926 GTGGCCGCTGTCCTTGAT 60.046 61.111 9.68 0.00 0.00 2.57
5708 8648 2.046023 TGGCCGCTGTCCTTGATG 60.046 61.111 0.00 0.00 0.00 3.07
5709 8649 2.268920 GGCCGCTGTCCTTGATGA 59.731 61.111 0.00 0.00 0.00 2.92
5710 8650 1.377202 GGCCGCTGTCCTTGATGAA 60.377 57.895 0.00 0.00 0.00 2.57
5711 8651 0.749454 GGCCGCTGTCCTTGATGAAT 60.749 55.000 0.00 0.00 0.00 2.57
5712 8652 0.659957 GCCGCTGTCCTTGATGAATC 59.340 55.000 0.00 0.00 0.00 2.52
5713 8653 1.303309 CCGCTGTCCTTGATGAATCC 58.697 55.000 0.00 0.00 0.00 3.01
5714 8654 1.134280 CCGCTGTCCTTGATGAATCCT 60.134 52.381 0.00 0.00 0.00 3.24
5715 8655 1.938577 CGCTGTCCTTGATGAATCCTG 59.061 52.381 0.00 0.00 0.00 3.86
5716 8656 1.674962 GCTGTCCTTGATGAATCCTGC 59.325 52.381 0.00 0.00 0.00 4.85
5717 8657 2.295885 CTGTCCTTGATGAATCCTGCC 58.704 52.381 0.00 0.00 0.00 4.85
5718 8658 1.303309 GTCCTTGATGAATCCTGCCG 58.697 55.000 0.00 0.00 0.00 5.69
5719 8659 0.464373 TCCTTGATGAATCCTGCCGC 60.464 55.000 0.00 0.00 0.00 6.53
5720 8660 0.465097 CCTTGATGAATCCTGCCGCT 60.465 55.000 0.00 0.00 0.00 5.52
5721 8661 0.661552 CTTGATGAATCCTGCCGCTG 59.338 55.000 0.00 0.00 0.00 5.18
5722 8662 1.378882 TTGATGAATCCTGCCGCTGC 61.379 55.000 0.00 0.00 38.26 5.25
5723 8663 2.517875 ATGAATCCTGCCGCTGCC 60.518 61.111 0.00 0.00 36.33 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 98 1.300620 CAAGACGGAAGCGGTGACA 60.301 57.895 0.00 0.00 0.00 3.58
275 276 2.170166 GAAACCACATGCCCAAGATCA 58.830 47.619 0.00 0.00 0.00 2.92
502 504 5.420409 AGACTAGGACGCTTTATTTTGGAG 58.580 41.667 0.00 0.00 0.00 3.86
937 942 6.458630 AATGATATCCAATGACCATGAGGA 57.541 37.500 0.00 6.83 38.69 3.71
1025 1030 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
1027 1032 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
1029 1034 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
1030 1035 6.422776 TTTGTTGTTGTTGTTGTTGTTGTT 57.577 29.167 0.00 0.00 0.00 2.83
1032 1037 4.903016 GCTTTGTTGTTGTTGTTGTTGTTG 59.097 37.500 0.00 0.00 0.00 3.33
1034 1039 3.496507 GGCTTTGTTGTTGTTGTTGTTGT 59.503 39.130 0.00 0.00 0.00 3.32
1035 1040 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
1036 1041 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
1037 1042 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
1038 1043 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
1039 1044 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
1040 1045 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
1041 1046 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
1042 1047 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
1043 1048 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
1044 1049 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
1046 1051 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
1047 1052 3.552890 GCTTGGGACTAAAGGCTTTGTTG 60.553 47.826 22.32 13.85 0.00 3.33
1048 1053 2.628178 GCTTGGGACTAAAGGCTTTGTT 59.372 45.455 22.32 8.73 0.00 2.83
1056 1663 3.923017 CCAACTTGCTTGGGACTAAAG 57.077 47.619 0.00 0.00 45.46 1.85
1065 1672 2.568623 AGTCTACCCCAACTTGCTTG 57.431 50.000 0.00 0.00 0.00 4.01
1066 1673 3.515901 CTCTAGTCTACCCCAACTTGCTT 59.484 47.826 0.00 0.00 0.00 3.91
1067 1674 3.100671 CTCTAGTCTACCCCAACTTGCT 58.899 50.000 0.00 0.00 0.00 3.91
1068 1675 2.168728 CCTCTAGTCTACCCCAACTTGC 59.831 54.545 0.00 0.00 0.00 4.01
1069 1676 3.195825 CACCTCTAGTCTACCCCAACTTG 59.804 52.174 0.00 0.00 0.00 3.16
1072 1679 3.097342 TCACCTCTAGTCTACCCCAAC 57.903 52.381 0.00 0.00 0.00 3.77
1073 1680 3.836562 GTTTCACCTCTAGTCTACCCCAA 59.163 47.826 0.00 0.00 0.00 4.12
1075 1682 2.765135 GGTTTCACCTCTAGTCTACCCC 59.235 54.545 0.00 0.00 34.73 4.95
1076 1683 2.765135 GGGTTTCACCTCTAGTCTACCC 59.235 54.545 0.00 0.00 38.64 3.69
1077 1684 3.438183 TGGGTTTCACCTCTAGTCTACC 58.562 50.000 0.00 0.00 38.64 3.18
1078 1685 6.606395 TCTTATGGGTTTCACCTCTAGTCTAC 59.394 42.308 0.00 0.00 38.64 2.59
1079 1686 6.738635 TCTTATGGGTTTCACCTCTAGTCTA 58.261 40.000 0.00 0.00 38.64 2.59
1082 1689 6.206042 AGATCTTATGGGTTTCACCTCTAGT 58.794 40.000 0.00 0.00 38.64 2.57
1083 1690 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
1085 1692 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
1088 1695 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
1089 1696 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
1096 1703 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
1100 1707 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
1102 1709 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
1115 2052 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
1118 2055 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
1121 2058 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
1123 2060 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
1129 2066 2.646930 TGGAAGCTTGCTATCCATGTG 58.353 47.619 19.34 0.00 38.30 3.21
1135 2072 1.336125 GGTGCATGGAAGCTTGCTATC 59.664 52.381 19.34 8.04 39.60 2.08
1138 2075 1.980772 GGGTGCATGGAAGCTTGCT 60.981 57.895 19.34 1.86 39.60 3.91
1140 2077 1.304713 AGGGGTGCATGGAAGCTTG 60.305 57.895 2.10 0.00 34.99 4.01
1141 2078 1.304713 CAGGGGTGCATGGAAGCTT 60.305 57.895 0.00 0.00 34.99 3.74
1144 2081 1.379044 GGACAGGGGTGCATGGAAG 60.379 63.158 0.00 0.00 35.12 3.46
1145 2082 2.159490 TGGACAGGGGTGCATGGAA 61.159 57.895 0.00 0.00 40.73 3.53
1146 2083 2.531428 TGGACAGGGGTGCATGGA 60.531 61.111 0.00 0.00 40.73 3.41
1151 2088 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.000 0.00 0.00 35.66 5.01
1152 2089 0.394565 GCTAGCTATGGACAGGGGTG 59.605 60.000 7.70 0.00 0.00 4.61
1153 2090 0.266152 AGCTAGCTATGGACAGGGGT 59.734 55.000 17.69 0.00 0.00 4.95
1155 2092 2.008242 AGAGCTAGCTATGGACAGGG 57.992 55.000 19.38 0.00 0.00 4.45
1156 2093 2.030363 CGAAGAGCTAGCTATGGACAGG 60.030 54.545 19.38 0.00 0.00 4.00
1157 2094 2.030363 CCGAAGAGCTAGCTATGGACAG 60.030 54.545 19.38 5.13 0.00 3.51
1160 2097 1.957177 CACCGAAGAGCTAGCTATGGA 59.043 52.381 19.38 0.00 0.00 3.41
1161 2098 1.957177 TCACCGAAGAGCTAGCTATGG 59.043 52.381 19.38 18.33 0.00 2.74
1162 2099 3.932545 ATCACCGAAGAGCTAGCTATG 57.067 47.619 19.38 5.35 0.00 2.23
1163 2100 3.759618 GGTATCACCGAAGAGCTAGCTAT 59.240 47.826 19.38 12.73 0.00 2.97
1164 2101 3.147629 GGTATCACCGAAGAGCTAGCTA 58.852 50.000 19.38 0.00 0.00 3.32
1165 2102 1.957877 GGTATCACCGAAGAGCTAGCT 59.042 52.381 19.45 19.45 0.00 3.32
1166 2103 1.000052 GGGTATCACCGAAGAGCTAGC 60.000 57.143 6.62 6.62 39.83 3.42
1167 2104 1.614413 GGGGTATCACCGAAGAGCTAG 59.386 57.143 0.00 0.00 39.83 3.42
1168 2105 1.063492 TGGGGTATCACCGAAGAGCTA 60.063 52.381 0.00 0.00 39.83 3.32
1171 2108 2.224305 GGATTGGGGTATCACCGAAGAG 60.224 54.545 0.00 0.00 39.83 2.85
1172 2109 1.766496 GGATTGGGGTATCACCGAAGA 59.234 52.381 0.00 0.00 39.83 2.87
1173 2110 1.768870 AGGATTGGGGTATCACCGAAG 59.231 52.381 0.00 0.00 39.83 3.79
1175 2112 1.766496 GAAGGATTGGGGTATCACCGA 59.234 52.381 0.00 0.00 39.83 4.69
1176 2113 1.488812 TGAAGGATTGGGGTATCACCG 59.511 52.381 0.00 0.00 39.83 4.94
1178 2115 2.509964 ACCTGAAGGATTGGGGTATCAC 59.490 50.000 2.62 0.00 38.94 3.06
1179 2116 2.777692 GACCTGAAGGATTGGGGTATCA 59.222 50.000 2.62 0.00 38.94 2.15
1180 2117 3.049344 AGACCTGAAGGATTGGGGTATC 58.951 50.000 2.62 0.00 38.94 2.24
1183 2120 1.203492 AGAGACCTGAAGGATTGGGGT 60.203 52.381 2.62 0.00 38.94 4.95
1185 2122 2.476199 AGAGAGACCTGAAGGATTGGG 58.524 52.381 2.62 0.00 38.94 4.12
1186 2123 5.423886 GTTAAGAGAGACCTGAAGGATTGG 58.576 45.833 2.62 0.00 38.94 3.16
1187 2124 5.105752 CGTTAAGAGAGACCTGAAGGATTG 58.894 45.833 2.62 0.00 38.94 2.67
1188 2125 4.160626 CCGTTAAGAGAGACCTGAAGGATT 59.839 45.833 2.62 0.00 38.94 3.01
1189 2126 3.702045 CCGTTAAGAGAGACCTGAAGGAT 59.298 47.826 2.62 0.00 38.94 3.24
1202 2157 1.848652 TGGGAGGAGTCCGTTAAGAG 58.151 55.000 2.76 0.00 45.05 2.85
1204 2159 1.831736 ACATGGGAGGAGTCCGTTAAG 59.168 52.381 2.76 0.00 45.05 1.85
1208 2163 0.544357 TTGACATGGGAGGAGTCCGT 60.544 55.000 2.76 0.00 45.05 4.69
1210 2165 3.282885 GAATTTGACATGGGAGGAGTCC 58.717 50.000 0.00 0.00 43.05 3.85
1213 2168 2.292267 CCGAATTTGACATGGGAGGAG 58.708 52.381 0.00 0.00 0.00 3.69
1215 2170 2.017049 GACCGAATTTGACATGGGAGG 58.983 52.381 0.00 0.00 0.00 4.30
1217 2172 3.370103 GGTAGACCGAATTTGACATGGGA 60.370 47.826 0.00 0.00 0.00 4.37
1218 2173 2.943033 GGTAGACCGAATTTGACATGGG 59.057 50.000 0.00 0.00 0.00 4.00
1219 2174 2.943033 GGGTAGACCGAATTTGACATGG 59.057 50.000 0.00 0.00 36.71 3.66
1220 2175 2.943033 GGGGTAGACCGAATTTGACATG 59.057 50.000 0.00 0.00 41.60 3.21
1221 2176 3.277142 GGGGTAGACCGAATTTGACAT 57.723 47.619 0.00 0.00 41.60 3.06
1232 2187 2.838693 GAGAGGGCGGGGTAGACC 60.839 72.222 0.00 0.00 40.48 3.85
1234 2189 1.381327 CAAGAGAGGGCGGGGTAGA 60.381 63.158 0.00 0.00 0.00 2.59
1235 2190 1.381327 TCAAGAGAGGGCGGGGTAG 60.381 63.158 0.00 0.00 0.00 3.18
1236 2191 1.684734 GTCAAGAGAGGGCGGGGTA 60.685 63.158 0.00 0.00 0.00 3.69
1237 2192 3.003763 GTCAAGAGAGGGCGGGGT 61.004 66.667 0.00 0.00 0.00 4.95
1239 2194 0.462759 GAATGTCAAGAGAGGGCGGG 60.463 60.000 0.00 0.00 0.00 6.13
1240 2195 0.539051 AGAATGTCAAGAGAGGGCGG 59.461 55.000 0.00 0.00 0.00 6.13
1243 2198 1.472376 GCGGAGAATGTCAAGAGAGGG 60.472 57.143 0.00 0.00 0.00 4.30
1244 2199 1.205655 TGCGGAGAATGTCAAGAGAGG 59.794 52.381 0.00 0.00 0.00 3.69
1246 2201 1.402852 CGTGCGGAGAATGTCAAGAGA 60.403 52.381 0.00 0.00 0.00 3.10
1247 2202 0.994995 CGTGCGGAGAATGTCAAGAG 59.005 55.000 0.00 0.00 0.00 2.85
1249 2204 1.016130 AGCGTGCGGAGAATGTCAAG 61.016 55.000 0.00 0.00 0.00 3.02
1250 2205 0.602638 AAGCGTGCGGAGAATGTCAA 60.603 50.000 0.00 0.00 0.00 3.18
1251 2206 0.602638 AAAGCGTGCGGAGAATGTCA 60.603 50.000 0.00 0.00 0.00 3.58
1252 2207 1.355971 TAAAGCGTGCGGAGAATGTC 58.644 50.000 0.00 0.00 0.00 3.06
1254 2209 1.261619 GGATAAAGCGTGCGGAGAATG 59.738 52.381 0.00 0.00 0.00 2.67
1257 2212 0.464036 ATGGATAAAGCGTGCGGAGA 59.536 50.000 0.00 0.00 0.00 3.71
1259 2214 0.531974 GGATGGATAAAGCGTGCGGA 60.532 55.000 0.00 0.00 0.00 5.54
1260 2215 1.831389 CGGATGGATAAAGCGTGCGG 61.831 60.000 0.00 0.00 0.00 5.69
1261 2216 1.564622 CGGATGGATAAAGCGTGCG 59.435 57.895 0.00 0.00 0.00 5.34
1262 2217 1.160329 AGCGGATGGATAAAGCGTGC 61.160 55.000 0.00 0.00 0.00 5.34
1263 2218 2.148916 TAGCGGATGGATAAAGCGTG 57.851 50.000 0.00 0.00 0.00 5.34
1264 2219 2.688507 CATAGCGGATGGATAAAGCGT 58.311 47.619 0.00 0.00 31.20 5.07
1265 2220 1.394917 GCATAGCGGATGGATAAAGCG 59.605 52.381 4.14 0.00 35.91 4.68
1266 2221 2.160417 GTGCATAGCGGATGGATAAAGC 59.840 50.000 0.00 0.00 38.28 3.51
1270 2225 1.276138 CCAGTGCATAGCGGATGGATA 59.724 52.381 0.00 0.00 38.28 2.59
1271 2226 0.035881 CCAGTGCATAGCGGATGGAT 59.964 55.000 0.00 0.00 38.28 3.41
1277 2232 0.745845 AAAGCTCCAGTGCATAGCGG 60.746 55.000 0.00 0.00 41.19 5.52
1278 2233 1.089920 AAAAGCTCCAGTGCATAGCG 58.910 50.000 0.00 0.00 41.19 4.26
1282 2237 1.542492 CTCCAAAAGCTCCAGTGCAT 58.458 50.000 0.00 0.00 34.99 3.96
1287 2862 0.964358 CAGGCCTCCAAAAGCTCCAG 60.964 60.000 0.00 0.00 0.00 3.86
1290 2865 1.871126 GCACAGGCCTCCAAAAGCTC 61.871 60.000 0.00 0.00 0.00 4.09
1295 2870 1.792757 ATCCAGCACAGGCCTCCAAA 61.793 55.000 0.00 0.00 42.56 3.28
1296 2871 0.913934 TATCCAGCACAGGCCTCCAA 60.914 55.000 0.00 0.00 42.56 3.53
1307 2882 0.334335 TGGTTTGGGCATATCCAGCA 59.666 50.000 0.00 0.00 38.17 4.41
1308 2883 1.615392 GATGGTTTGGGCATATCCAGC 59.385 52.381 0.00 0.00 38.17 4.85
1309 2884 3.152341 GAGATGGTTTGGGCATATCCAG 58.848 50.000 0.00 0.00 38.17 3.86
1310 2885 2.513317 TGAGATGGTTTGGGCATATCCA 59.487 45.455 0.00 0.00 36.21 3.41
1311 2886 3.152341 CTGAGATGGTTTGGGCATATCC 58.848 50.000 0.00 0.00 0.00 2.59
1314 2889 2.419990 CGTCTGAGATGGTTTGGGCATA 60.420 50.000 0.00 0.00 0.00 3.14
1315 2890 1.679944 CGTCTGAGATGGTTTGGGCAT 60.680 52.381 0.00 0.00 0.00 4.40
1317 2892 0.036388 TCGTCTGAGATGGTTTGGGC 60.036 55.000 1.24 0.00 0.00 5.36
1319 2894 3.338249 AACATCGTCTGAGATGGTTTGG 58.662 45.455 16.20 0.00 45.46 3.28
1320 2895 4.929211 TGTAACATCGTCTGAGATGGTTTG 59.071 41.667 16.20 0.93 45.46 2.93
1321 2896 5.147330 TGTAACATCGTCTGAGATGGTTT 57.853 39.130 16.20 8.73 45.46 3.27
1326 2901 6.634805 AGATTGTTGTAACATCGTCTGAGAT 58.365 36.000 0.00 0.00 38.95 2.75
1327 2902 6.025749 AGATTGTTGTAACATCGTCTGAGA 57.974 37.500 0.00 0.00 38.95 3.27
1328 2903 7.463383 GCTTAGATTGTTGTAACATCGTCTGAG 60.463 40.741 15.08 15.08 38.95 3.35
1330 2905 6.090763 TGCTTAGATTGTTGTAACATCGTCTG 59.909 38.462 13.44 0.00 38.95 3.51
1331 2906 6.163476 TGCTTAGATTGTTGTAACATCGTCT 58.837 36.000 0.00 5.87 38.95 4.18
1332 2907 6.403333 TGCTTAGATTGTTGTAACATCGTC 57.597 37.500 0.00 0.00 38.95 4.20
1333 2908 6.593770 TGATGCTTAGATTGTTGTAACATCGT 59.406 34.615 0.00 0.00 38.95 3.73
1334 2909 7.003939 TGATGCTTAGATTGTTGTAACATCG 57.996 36.000 0.00 0.00 38.95 3.84
1335 2910 8.834465 AGATGATGCTTAGATTGTTGTAACATC 58.166 33.333 0.00 0.00 38.95 3.06
1336 2911 8.743085 AGATGATGCTTAGATTGTTGTAACAT 57.257 30.769 0.00 0.00 38.95 2.71
1338 2913 9.922305 GTTAGATGATGCTTAGATTGTTGTAAC 57.078 33.333 0.00 0.00 0.00 2.50
1339 2914 9.890629 AGTTAGATGATGCTTAGATTGTTGTAA 57.109 29.630 0.00 0.00 0.00 2.41
1340 2915 9.890629 AAGTTAGATGATGCTTAGATTGTTGTA 57.109 29.630 0.00 0.00 0.00 2.41
1499 3566 7.334421 GGTCAGTTTCTAGCATTGTATCAAGAA 59.666 37.037 0.00 0.00 0.00 2.52
1566 3636 8.975439 ACAAACGTCTGTAATAAGAAGTACAAG 58.025 33.333 0.00 0.00 37.83 3.16
1580 3650 4.594123 TGGAGATCAACAAACGTCTGTA 57.406 40.909 0.00 0.00 0.00 2.74
1776 3875 2.258286 GGTGGCGCTCGCAAAAAT 59.742 55.556 16.36 0.00 44.11 1.82
1825 4601 7.154191 AGAAGCCATTTTATGATCTTCCCTA 57.846 36.000 13.15 0.00 38.87 3.53
1881 4657 0.723981 GACGATGGCAGCAAGTTCTC 59.276 55.000 2.73 0.00 0.00 2.87
1885 4661 2.434884 CGGACGATGGCAGCAAGT 60.435 61.111 2.73 0.00 0.00 3.16
2284 5066 1.202722 ACAGATTTTGGTTCCCGTCGT 60.203 47.619 0.00 0.00 0.00 4.34
2300 5082 2.177394 TTATTGTTGGCGAGCACAGA 57.823 45.000 0.00 0.00 0.00 3.41
2421 5203 2.019249 CCTGTGCCAACATGGTATCTG 58.981 52.381 0.00 0.00 40.46 2.90
2557 5345 5.653255 AACCTGGAATCCACATATTAGCT 57.347 39.130 0.00 0.00 0.00 3.32
2590 5378 3.153919 GAGAGGAGCGTAGGAATCATCT 58.846 50.000 5.34 5.34 36.85 2.90
2596 5384 1.453379 CCGGAGAGGAGCGTAGGAA 60.453 63.158 0.00 0.00 45.00 3.36
2633 5421 5.645067 TCTCCAAGAACATAAACTCAGCATG 59.355 40.000 0.00 0.00 37.54 4.06
2988 5874 4.291540 TGCACAAGTGATTTCAAGACAC 57.708 40.909 4.04 0.00 35.15 3.67
3480 6376 6.780457 AACAAATACCTGATCATCCAAAGG 57.220 37.500 0.00 0.00 35.82 3.11
3505 6401 6.422333 TCCATTTCATAGTTGCATTCCAGTA 58.578 36.000 0.00 0.00 0.00 2.74
3507 6403 5.840243 TCCATTTCATAGTTGCATTCCAG 57.160 39.130 0.00 0.00 0.00 3.86
3554 6457 4.164221 AGCTCCAGCCTGTAAGCTTAAATA 59.836 41.667 7.99 0.00 42.23 1.40
3901 6807 4.764050 TGGGGATCGTGTTGTACATATT 57.236 40.909 0.00 0.00 0.00 1.28
3914 6820 2.918712 AGCAGAGTAAATGGGGATCG 57.081 50.000 0.00 0.00 0.00 3.69
3990 6896 5.106869 CGGAACTGAATAAAAACGACATCCA 60.107 40.000 0.00 0.00 0.00 3.41
4028 6934 7.161404 TGTCATAGGCCAATGATATAACTGAC 58.839 38.462 5.01 0.00 38.13 3.51
4249 7155 4.528987 GCTAGGGTAGGATAAAAGGGAGAG 59.471 50.000 0.00 0.00 0.00 3.20
4250 7156 4.078219 TGCTAGGGTAGGATAAAAGGGAGA 60.078 45.833 0.00 0.00 0.00 3.71
4251 7157 4.232091 TGCTAGGGTAGGATAAAAGGGAG 58.768 47.826 0.00 0.00 0.00 4.30
4252 7158 4.289837 TGCTAGGGTAGGATAAAAGGGA 57.710 45.455 0.00 0.00 0.00 4.20
4268 7174 9.546909 CACAGACAATAACTAACAAATTGCTAG 57.453 33.333 2.18 2.18 34.63 3.42
4370 7276 6.695713 CAGAATATGAATGGATTTGCACACAG 59.304 38.462 0.00 0.00 0.00 3.66
4623 7529 0.107654 ACCTTCTAATGGCACGAGGC 60.108 55.000 0.00 0.00 43.74 4.70
4630 7536 3.350219 TCAAGGTGACCTTCTAATGGC 57.650 47.619 15.20 0.00 42.67 4.40
4631 7537 4.164988 AGGATCAAGGTGACCTTCTAATGG 59.835 45.833 15.20 2.08 42.67 3.16
4784 7690 3.324930 TGCTGACTGGCTCCCCTG 61.325 66.667 0.00 0.00 36.24 4.45
4846 7752 3.266510 TCCATGACTACTGTGCAATCC 57.733 47.619 0.00 0.00 0.00 3.01
4865 7771 4.083057 GCCTCCAGTTGAATCTTGTTCTTC 60.083 45.833 0.00 0.00 0.00 2.87
4960 7867 0.737804 TTTGAGCTCTTGTTGCGCAA 59.262 45.000 21.02 21.02 45.46 4.85
5111 8049 5.666969 TGTTTGGACAGAGTTGTTATTCG 57.333 39.130 0.00 0.00 37.76 3.34
5215 8153 6.830912 TGGGAGTATGTTTCAATCCATCTAG 58.169 40.000 0.00 0.00 0.00 2.43
5234 8172 4.611943 CTCGTAGTGTATTGTGATGGGAG 58.388 47.826 0.00 0.00 0.00 4.30
5236 8174 3.123804 GCTCGTAGTGTATTGTGATGGG 58.876 50.000 0.00 0.00 0.00 4.00
5237 8175 3.123804 GGCTCGTAGTGTATTGTGATGG 58.876 50.000 0.00 0.00 0.00 3.51
5250 8190 2.309528 TTTGCATACTGGGCTCGTAG 57.690 50.000 0.00 0.00 0.00 3.51
5280 8220 1.098050 GCCATACAACAGCCAAGAGG 58.902 55.000 0.00 0.00 38.23 3.69
5281 8221 1.825090 TGCCATACAACAGCCAAGAG 58.175 50.000 0.00 0.00 0.00 2.85
5282 8222 2.512692 ATGCCATACAACAGCCAAGA 57.487 45.000 0.00 0.00 0.00 3.02
5283 8223 3.696051 AGTTATGCCATACAACAGCCAAG 59.304 43.478 0.00 0.00 0.00 3.61
5284 8224 3.696045 AGTTATGCCATACAACAGCCAA 58.304 40.909 0.00 0.00 0.00 4.52
5285 8225 3.364460 AGTTATGCCATACAACAGCCA 57.636 42.857 0.00 0.00 0.00 4.75
5286 8226 4.881850 ACTTAGTTATGCCATACAACAGCC 59.118 41.667 0.00 0.00 0.00 4.85
5287 8227 6.436843 AACTTAGTTATGCCATACAACAGC 57.563 37.500 0.00 0.00 0.00 4.40
5288 8228 8.730680 AGAAAACTTAGTTATGCCATACAACAG 58.269 33.333 0.00 0.00 0.00 3.16
5289 8229 8.630054 AGAAAACTTAGTTATGCCATACAACA 57.370 30.769 0.00 0.00 0.00 3.33
5290 8230 8.726988 TGAGAAAACTTAGTTATGCCATACAAC 58.273 33.333 0.00 0.00 0.00 3.32
5291 8231 8.726988 GTGAGAAAACTTAGTTATGCCATACAA 58.273 33.333 0.00 0.00 0.00 2.41
5292 8232 7.880713 TGTGAGAAAACTTAGTTATGCCATACA 59.119 33.333 0.00 0.00 0.00 2.29
5293 8233 8.263940 TGTGAGAAAACTTAGTTATGCCATAC 57.736 34.615 0.00 0.00 0.00 2.39
5294 8234 9.461312 AATGTGAGAAAACTTAGTTATGCCATA 57.539 29.630 0.00 0.00 0.00 2.74
5295 8235 7.944729 ATGTGAGAAAACTTAGTTATGCCAT 57.055 32.000 0.00 0.00 0.00 4.40
5296 8236 7.759489 AATGTGAGAAAACTTAGTTATGCCA 57.241 32.000 0.00 0.00 0.00 4.92
5297 8237 7.910683 GCTAATGTGAGAAAACTTAGTTATGCC 59.089 37.037 0.00 0.00 0.00 4.40
5298 8238 8.450964 TGCTAATGTGAGAAAACTTAGTTATGC 58.549 33.333 0.00 0.00 0.00 3.14
5299 8239 9.760660 GTGCTAATGTGAGAAAACTTAGTTATG 57.239 33.333 0.00 0.00 0.00 1.90
5300 8240 8.947115 GGTGCTAATGTGAGAAAACTTAGTTAT 58.053 33.333 0.00 0.00 0.00 1.89
5301 8241 8.154856 AGGTGCTAATGTGAGAAAACTTAGTTA 58.845 33.333 0.00 0.00 0.00 2.24
5302 8242 6.998673 AGGTGCTAATGTGAGAAAACTTAGTT 59.001 34.615 0.00 0.00 0.00 2.24
5303 8243 6.534634 AGGTGCTAATGTGAGAAAACTTAGT 58.465 36.000 0.00 0.00 0.00 2.24
5304 8244 6.876257 AGAGGTGCTAATGTGAGAAAACTTAG 59.124 38.462 0.00 0.00 0.00 2.18
5305 8245 6.650807 CAGAGGTGCTAATGTGAGAAAACTTA 59.349 38.462 0.00 0.00 0.00 2.24
5306 8246 5.471456 CAGAGGTGCTAATGTGAGAAAACTT 59.529 40.000 0.00 0.00 0.00 2.66
5307 8247 4.999950 CAGAGGTGCTAATGTGAGAAAACT 59.000 41.667 0.00 0.00 0.00 2.66
5308 8248 4.757149 ACAGAGGTGCTAATGTGAGAAAAC 59.243 41.667 0.00 0.00 0.00 2.43
5309 8249 4.973168 ACAGAGGTGCTAATGTGAGAAAA 58.027 39.130 0.00 0.00 0.00 2.29
5310 8250 4.040339 TGACAGAGGTGCTAATGTGAGAAA 59.960 41.667 0.00 0.00 0.00 2.52
5311 8251 3.578282 TGACAGAGGTGCTAATGTGAGAA 59.422 43.478 0.00 0.00 0.00 2.87
5312 8252 3.056536 GTGACAGAGGTGCTAATGTGAGA 60.057 47.826 0.00 0.00 0.00 3.27
5313 8253 3.257393 GTGACAGAGGTGCTAATGTGAG 58.743 50.000 0.00 0.00 0.00 3.51
5314 8254 2.028112 GGTGACAGAGGTGCTAATGTGA 60.028 50.000 0.00 0.00 0.00 3.58
5315 8255 2.289631 TGGTGACAGAGGTGCTAATGTG 60.290 50.000 0.00 0.00 35.01 3.21
5316 8256 1.977854 TGGTGACAGAGGTGCTAATGT 59.022 47.619 0.00 0.00 35.01 2.71
5317 8257 2.768253 TGGTGACAGAGGTGCTAATG 57.232 50.000 0.00 0.00 35.01 1.90
5329 8269 0.254462 TTGCTTGGTGACTGGTGACA 59.746 50.000 0.00 0.00 39.59 3.58
5330 8270 1.334869 CTTTGCTTGGTGACTGGTGAC 59.665 52.381 0.00 0.00 0.00 3.67
5331 8271 1.211703 TCTTTGCTTGGTGACTGGTGA 59.788 47.619 0.00 0.00 0.00 4.02
5332 8272 1.679139 TCTTTGCTTGGTGACTGGTG 58.321 50.000 0.00 0.00 0.00 4.17
5333 8273 2.435372 TTCTTTGCTTGGTGACTGGT 57.565 45.000 0.00 0.00 0.00 4.00
5334 8274 3.799281 TTTTCTTTGCTTGGTGACTGG 57.201 42.857 0.00 0.00 0.00 4.00
5335 8275 4.935702 TGATTTTCTTTGCTTGGTGACTG 58.064 39.130 0.00 0.00 0.00 3.51
5336 8276 5.596836 TTGATTTTCTTTGCTTGGTGACT 57.403 34.783 0.00 0.00 0.00 3.41
5337 8277 6.313658 AGTTTTGATTTTCTTTGCTTGGTGAC 59.686 34.615 0.00 0.00 0.00 3.67
5363 8303 6.868622 AGTGACTGCTAATTTAGTCTACTGG 58.131 40.000 14.38 0.00 42.86 4.00
5470 8410 0.314935 CCACATGCAACACAGGGAAC 59.685 55.000 0.00 0.00 33.23 3.62
5471 8411 1.462731 GCCACATGCAACACAGGGAA 61.463 55.000 0.00 0.00 40.77 3.97
5472 8412 1.902918 GCCACATGCAACACAGGGA 60.903 57.895 0.00 0.00 40.77 4.20
5473 8413 1.870055 GAGCCACATGCAACACAGGG 61.870 60.000 0.00 0.00 44.83 4.45
5474 8414 1.582968 GAGCCACATGCAACACAGG 59.417 57.895 0.00 0.00 44.83 4.00
5475 8415 1.208358 CGAGCCACATGCAACACAG 59.792 57.895 0.00 0.00 44.83 3.66
5476 8416 2.906939 GCGAGCCACATGCAACACA 61.907 57.895 0.00 0.00 44.83 3.72
5477 8417 2.126734 GCGAGCCACATGCAACAC 60.127 61.111 0.00 0.00 44.83 3.32
5478 8418 2.192187 TTGCGAGCCACATGCAACA 61.192 52.632 0.00 0.00 43.13 3.33
5479 8419 2.644418 TTGCGAGCCACATGCAAC 59.356 55.556 0.00 0.00 43.13 4.17
5480 8420 2.644418 GTTGCGAGCCACATGCAA 59.356 55.556 0.00 0.00 45.54 4.08
5481 8421 3.364441 GGTTGCGAGCCACATGCA 61.364 61.111 0.00 0.00 44.83 3.96
5482 8422 3.364441 TGGTTGCGAGCCACATGC 61.364 61.111 0.00 0.00 41.71 4.06
5490 8430 3.716006 CTGCACGGTGGTTGCGAG 61.716 66.667 10.60 0.00 0.00 5.03
5491 8431 3.741830 TTCTGCACGGTGGTTGCGA 62.742 57.895 10.60 0.00 0.00 5.10
5492 8432 2.128853 AATTCTGCACGGTGGTTGCG 62.129 55.000 10.60 0.00 0.00 4.85
5493 8433 0.031994 AAATTCTGCACGGTGGTTGC 59.968 50.000 10.60 0.00 0.00 4.17
5494 8434 1.602668 CCAAATTCTGCACGGTGGTTG 60.603 52.381 10.60 0.00 0.00 3.77
5495 8435 0.673437 CCAAATTCTGCACGGTGGTT 59.327 50.000 10.60 0.00 0.00 3.67
5496 8436 1.178534 CCCAAATTCTGCACGGTGGT 61.179 55.000 10.60 0.00 0.00 4.16
5497 8437 1.178534 ACCCAAATTCTGCACGGTGG 61.179 55.000 10.60 0.00 0.00 4.61
5498 8438 0.673437 AACCCAAATTCTGCACGGTG 59.327 50.000 3.15 3.15 0.00 4.94
5499 8439 0.673437 CAACCCAAATTCTGCACGGT 59.327 50.000 0.00 0.00 0.00 4.83
5500 8440 0.673437 ACAACCCAAATTCTGCACGG 59.327 50.000 0.00 0.00 0.00 4.94
5501 8441 2.507339 AACAACCCAAATTCTGCACG 57.493 45.000 0.00 0.00 0.00 5.34
5502 8442 2.871633 CCAAACAACCCAAATTCTGCAC 59.128 45.455 0.00 0.00 0.00 4.57
5503 8443 2.503356 ACCAAACAACCCAAATTCTGCA 59.497 40.909 0.00 0.00 0.00 4.41
5504 8444 2.871633 CACCAAACAACCCAAATTCTGC 59.128 45.455 0.00 0.00 0.00 4.26
5505 8445 3.870419 CACACCAAACAACCCAAATTCTG 59.130 43.478 0.00 0.00 0.00 3.02
5506 8446 3.681313 GCACACCAAACAACCCAAATTCT 60.681 43.478 0.00 0.00 0.00 2.40
5507 8447 2.611751 GCACACCAAACAACCCAAATTC 59.388 45.455 0.00 0.00 0.00 2.17
5508 8448 2.238395 AGCACACCAAACAACCCAAATT 59.762 40.909 0.00 0.00 0.00 1.82
5509 8449 1.836802 AGCACACCAAACAACCCAAAT 59.163 42.857 0.00 0.00 0.00 2.32
5510 8450 1.066573 CAGCACACCAAACAACCCAAA 60.067 47.619 0.00 0.00 0.00 3.28
5511 8451 0.534412 CAGCACACCAAACAACCCAA 59.466 50.000 0.00 0.00 0.00 4.12
5512 8452 1.954362 GCAGCACACCAAACAACCCA 61.954 55.000 0.00 0.00 0.00 4.51
5513 8453 1.227234 GCAGCACACCAAACAACCC 60.227 57.895 0.00 0.00 0.00 4.11
5514 8454 0.104671 ATGCAGCACACCAAACAACC 59.895 50.000 0.00 0.00 0.00 3.77
5515 8455 1.210870 CATGCAGCACACCAAACAAC 58.789 50.000 0.00 0.00 0.00 3.32
5516 8456 0.104487 CCATGCAGCACACCAAACAA 59.896 50.000 0.00 0.00 0.00 2.83
5517 8457 1.740905 CCATGCAGCACACCAAACA 59.259 52.632 0.00 0.00 0.00 2.83
5518 8458 1.005867 CCCATGCAGCACACCAAAC 60.006 57.895 0.00 0.00 0.00 2.93
5519 8459 2.870119 GCCCATGCAGCACACCAAA 61.870 57.895 0.00 0.00 37.47 3.28
5520 8460 3.304721 GCCCATGCAGCACACCAA 61.305 61.111 0.00 0.00 37.47 3.67
5521 8461 4.289101 AGCCCATGCAGCACACCA 62.289 61.111 0.00 0.00 41.13 4.17
5522 8462 3.446570 GAGCCCATGCAGCACACC 61.447 66.667 0.00 0.00 41.13 4.16
5523 8463 1.930908 GAAGAGCCCATGCAGCACAC 61.931 60.000 0.00 0.00 41.13 3.82
5524 8464 1.676635 GAAGAGCCCATGCAGCACA 60.677 57.895 0.00 0.00 41.13 4.57
5525 8465 2.758089 CGAAGAGCCCATGCAGCAC 61.758 63.158 0.00 2.55 41.13 4.40
5526 8466 2.437180 CGAAGAGCCCATGCAGCA 60.437 61.111 0.00 0.00 41.13 4.41
5527 8467 3.207669 CCGAAGAGCCCATGCAGC 61.208 66.667 0.00 0.00 41.13 5.25
5528 8468 3.207669 GCCGAAGAGCCCATGCAG 61.208 66.667 0.00 0.00 41.13 4.41
5548 8488 4.062656 TTTTTGCATCCGCGGGCC 62.063 61.111 27.83 14.33 42.97 5.80
5562 8502 4.852388 GGCTGAGAGGGCCTTTTT 57.148 55.556 7.89 0.00 45.57 1.94
5576 8516 2.759795 GTTTCCCTCAGCCTGGCT 59.240 61.111 17.22 17.22 40.77 4.75
5577 8517 2.747855 CGTTTCCCTCAGCCTGGC 60.748 66.667 11.65 11.65 0.00 4.85
5578 8518 1.672356 CACGTTTCCCTCAGCCTGG 60.672 63.158 0.00 0.00 0.00 4.45
5579 8519 1.672356 CCACGTTTCCCTCAGCCTG 60.672 63.158 0.00 0.00 0.00 4.85
5580 8520 2.750350 CCACGTTTCCCTCAGCCT 59.250 61.111 0.00 0.00 0.00 4.58
5581 8521 2.359975 CCCACGTTTCCCTCAGCC 60.360 66.667 0.00 0.00 0.00 4.85
5582 8522 0.322546 ATTCCCACGTTTCCCTCAGC 60.323 55.000 0.00 0.00 0.00 4.26
5583 8523 1.739067 GATTCCCACGTTTCCCTCAG 58.261 55.000 0.00 0.00 0.00 3.35
5584 8524 0.036765 CGATTCCCACGTTTCCCTCA 60.037 55.000 0.00 0.00 0.00 3.86
5585 8525 0.743345 CCGATTCCCACGTTTCCCTC 60.743 60.000 0.00 0.00 0.00 4.30
5586 8526 1.298667 CCGATTCCCACGTTTCCCT 59.701 57.895 0.00 0.00 0.00 4.20
5587 8527 1.747745 CCCGATTCCCACGTTTCCC 60.748 63.158 0.00 0.00 0.00 3.97
5588 8528 2.404186 GCCCGATTCCCACGTTTCC 61.404 63.158 0.00 0.00 0.00 3.13
5589 8529 2.746803 CGCCCGATTCCCACGTTTC 61.747 63.158 0.00 0.00 0.00 2.78
5590 8530 2.169937 TACGCCCGATTCCCACGTTT 62.170 55.000 0.00 0.00 38.12 3.60
5591 8531 1.963464 ATACGCCCGATTCCCACGTT 61.963 55.000 0.00 0.00 38.12 3.99
5592 8532 2.359570 GATACGCCCGATTCCCACGT 62.360 60.000 0.00 0.00 40.53 4.49
5593 8533 1.663702 GATACGCCCGATTCCCACG 60.664 63.158 0.00 0.00 0.00 4.94
5594 8534 0.319641 GAGATACGCCCGATTCCCAC 60.320 60.000 0.00 0.00 0.00 4.61
5595 8535 1.802337 CGAGATACGCCCGATTCCCA 61.802 60.000 0.00 0.00 34.51 4.37
5596 8536 1.080705 CGAGATACGCCCGATTCCC 60.081 63.158 0.00 0.00 34.51 3.97
5597 8537 4.554163 CGAGATACGCCCGATTCC 57.446 61.111 0.00 0.00 34.51 3.01
5606 8546 2.353607 GCCTGGACGCGAGATACG 60.354 66.667 15.93 0.00 45.66 3.06
5607 8547 1.008309 GAGCCTGGACGCGAGATAC 60.008 63.158 15.93 0.00 0.00 2.24
5608 8548 2.543802 CGAGCCTGGACGCGAGATA 61.544 63.158 15.93 0.00 34.56 1.98
5609 8549 3.893763 CGAGCCTGGACGCGAGAT 61.894 66.667 15.93 0.00 34.56 2.75
5632 8572 1.282930 AAGGAGAAACGCGAACGAGC 61.283 55.000 15.93 0.00 43.93 5.03
5633 8573 1.124477 GAAAGGAGAAACGCGAACGAG 59.876 52.381 15.93 0.00 43.93 4.18
5634 8574 1.134226 GAAAGGAGAAACGCGAACGA 58.866 50.000 15.93 0.00 43.93 3.85
5636 8576 0.516001 GGGAAAGGAGAAACGCGAAC 59.484 55.000 15.93 3.14 0.00 3.95
5637 8577 0.604511 GGGGAAAGGAGAAACGCGAA 60.605 55.000 15.93 0.00 0.00 4.70
5638 8578 1.004200 GGGGAAAGGAGAAACGCGA 60.004 57.895 15.93 0.00 0.00 5.87
5639 8579 0.605589 AAGGGGAAAGGAGAAACGCG 60.606 55.000 3.53 3.53 0.00 6.01
5640 8580 1.166129 GAAGGGGAAAGGAGAAACGC 58.834 55.000 0.00 0.00 0.00 4.84
5641 8581 2.224548 ACAGAAGGGGAAAGGAGAAACG 60.225 50.000 0.00 0.00 0.00 3.60
5642 8582 3.413327 GACAGAAGGGGAAAGGAGAAAC 58.587 50.000 0.00 0.00 0.00 2.78
5643 8583 2.038557 CGACAGAAGGGGAAAGGAGAAA 59.961 50.000 0.00 0.00 0.00 2.52
5644 8584 1.623811 CGACAGAAGGGGAAAGGAGAA 59.376 52.381 0.00 0.00 0.00 2.87
5645 8585 1.267121 CGACAGAAGGGGAAAGGAGA 58.733 55.000 0.00 0.00 0.00 3.71
5646 8586 0.391793 GCGACAGAAGGGGAAAGGAG 60.392 60.000 0.00 0.00 0.00 3.69
5647 8587 0.836400 AGCGACAGAAGGGGAAAGGA 60.836 55.000 0.00 0.00 0.00 3.36
5648 8588 0.674895 CAGCGACAGAAGGGGAAAGG 60.675 60.000 0.00 0.00 0.00 3.11
5649 8589 1.301677 GCAGCGACAGAAGGGGAAAG 61.302 60.000 0.00 0.00 0.00 2.62
5650 8590 1.302511 GCAGCGACAGAAGGGGAAA 60.303 57.895 0.00 0.00 0.00 3.13
5651 8591 2.347490 GCAGCGACAGAAGGGGAA 59.653 61.111 0.00 0.00 0.00 3.97
5652 8592 4.069232 CGCAGCGACAGAAGGGGA 62.069 66.667 9.98 0.00 0.00 4.81
5665 8605 4.218578 AGAGAGGATGCGGCGCAG 62.219 66.667 38.27 6.41 43.65 5.18
5666 8606 4.519437 CAGAGAGGATGCGGCGCA 62.519 66.667 38.09 38.09 44.86 6.09
5667 8607 3.138930 TACAGAGAGGATGCGGCGC 62.139 63.158 27.44 27.44 0.00 6.53
5668 8608 1.007964 CTACAGAGAGGATGCGGCG 60.008 63.158 0.51 0.51 0.00 6.46
5669 8609 1.300542 GCTACAGAGAGGATGCGGC 60.301 63.158 0.00 0.00 0.00 6.53
5670 8610 1.112315 AGGCTACAGAGAGGATGCGG 61.112 60.000 0.00 0.00 0.00 5.69
5671 8611 0.031857 CAGGCTACAGAGAGGATGCG 59.968 60.000 0.00 0.00 0.00 4.73
5672 8612 1.118838 ACAGGCTACAGAGAGGATGC 58.881 55.000 0.00 0.00 0.00 3.91
5673 8613 1.411977 CCACAGGCTACAGAGAGGATG 59.588 57.143 0.00 0.00 0.00 3.51
5674 8614 1.786937 CCACAGGCTACAGAGAGGAT 58.213 55.000 0.00 0.00 0.00 3.24
5675 8615 0.972983 GCCACAGGCTACAGAGAGGA 60.973 60.000 0.00 0.00 46.69 3.71
5676 8616 1.519719 GCCACAGGCTACAGAGAGG 59.480 63.158 0.00 0.00 46.69 3.69
5687 8627 4.335647 AAGGACAGCGGCCACAGG 62.336 66.667 2.24 0.00 0.00 4.00
5688 8628 2.809861 ATCAAGGACAGCGGCCACAG 62.810 60.000 2.24 0.00 0.00 3.66
5689 8629 2.894257 ATCAAGGACAGCGGCCACA 61.894 57.895 2.24 0.00 0.00 4.17
5690 8630 2.045926 ATCAAGGACAGCGGCCAC 60.046 61.111 2.24 0.00 0.00 5.01
5691 8631 2.046023 CATCAAGGACAGCGGCCA 60.046 61.111 2.24 0.00 0.00 5.36
5692 8632 0.749454 ATTCATCAAGGACAGCGGCC 60.749 55.000 0.00 0.00 0.00 6.13
5693 8633 0.659957 GATTCATCAAGGACAGCGGC 59.340 55.000 0.00 0.00 0.00 6.53
5694 8634 1.134280 AGGATTCATCAAGGACAGCGG 60.134 52.381 0.00 0.00 0.00 5.52
5695 8635 1.938577 CAGGATTCATCAAGGACAGCG 59.061 52.381 0.00 0.00 0.00 5.18
5696 8636 1.674962 GCAGGATTCATCAAGGACAGC 59.325 52.381 0.00 0.00 0.00 4.40
5697 8637 2.295885 GGCAGGATTCATCAAGGACAG 58.704 52.381 0.00 0.00 0.00 3.51
5698 8638 1.407299 CGGCAGGATTCATCAAGGACA 60.407 52.381 0.00 0.00 0.00 4.02
5699 8639 1.303309 CGGCAGGATTCATCAAGGAC 58.697 55.000 0.00 0.00 0.00 3.85
5700 8640 0.464373 GCGGCAGGATTCATCAAGGA 60.464 55.000 0.00 0.00 0.00 3.36
5701 8641 0.465097 AGCGGCAGGATTCATCAAGG 60.465 55.000 1.45 0.00 0.00 3.61
5702 8642 0.661552 CAGCGGCAGGATTCATCAAG 59.338 55.000 1.45 0.00 0.00 3.02
5703 8643 1.378882 GCAGCGGCAGGATTCATCAA 61.379 55.000 3.18 0.00 40.72 2.57
5704 8644 1.820906 GCAGCGGCAGGATTCATCA 60.821 57.895 3.18 0.00 40.72 3.07
5705 8645 2.550101 GGCAGCGGCAGGATTCATC 61.550 63.158 11.88 0.00 43.71 2.92
5706 8646 2.517875 GGCAGCGGCAGGATTCAT 60.518 61.111 11.88 0.00 43.71 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.