Multiple sequence alignment - TraesCS6B01G123400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G123400 chr6B 100.000 4092 0 0 877 4968 118198161 118194070 0.000000e+00 7557.0
1 TraesCS6B01G123400 chr6B 100.000 343 0 0 1 343 118199037 118198695 7.020000e-178 634.0
2 TraesCS6B01G123400 chr6B 79.930 284 36 13 4080 4359 87326699 87326965 6.570000e-44 189.0
3 TraesCS6B01G123400 chr6A 94.018 2474 108 19 1635 4081 61888769 61886309 0.000000e+00 3712.0
4 TraesCS6B01G123400 chr6A 93.084 694 41 5 947 1635 61889487 61888796 0.000000e+00 1009.0
5 TraesCS6B01G123400 chr6A 88.302 530 29 14 4080 4581 61886279 61885755 5.500000e-169 604.0
6 TraesCS6B01G123400 chr6A 84.324 185 11 13 13 185 61890084 61889906 1.110000e-36 165.0
7 TraesCS6B01G123400 chr6D 90.442 2511 165 26 1635 4081 53553271 53555770 0.000000e+00 3238.0
8 TraesCS6B01G123400 chr6D 92.829 767 39 10 877 1635 53552486 53553244 0.000000e+00 1098.0
9 TraesCS6B01G123400 chr6D 90.000 310 10 10 4080 4382 53555798 53556093 1.010000e-101 381.0
10 TraesCS6B01G123400 chr6D 84.049 326 9 14 8 319 53552154 53552450 1.760000e-69 274.0
11 TraesCS6B01G123400 chr7A 84.390 205 18 7 4080 4284 389775 389965 6.570000e-44 189.0
12 TraesCS6B01G123400 chr7A 77.097 310 39 16 4080 4382 170308128 170308412 3.100000e-32 150.0
13 TraesCS6B01G123400 chr3B 76.527 311 36 18 4080 4382 65703521 65703240 8.670000e-28 135.0
14 TraesCS6B01G123400 chr3B 93.548 62 4 0 4080 4141 10485893 10485832 5.300000e-15 93.5
15 TraesCS6B01G123400 chr5B 95.161 62 3 0 4080 4141 652144027 652143966 1.140000e-16 99.0
16 TraesCS6B01G123400 chr5B 93.548 62 4 0 4080 4141 651938805 651938744 5.300000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G123400 chr6B 118194070 118199037 4967 True 4095.50 7557 100.000 1 4968 2 chr6B.!!$R1 4967
1 TraesCS6B01G123400 chr6A 61885755 61890084 4329 True 1372.50 3712 89.932 13 4581 4 chr6A.!!$R1 4568
2 TraesCS6B01G123400 chr6D 53552154 53556093 3939 False 1247.75 3238 89.330 8 4382 4 chr6D.!!$F1 4374

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
966 987 0.046397 AAACCCTAGGGCCCAGATCT 59.954 55.0 28.88 4.81 39.32 2.75 F
2126 2179 0.250684 TCGGATGCAGTTTTGGCTGA 60.251 50.0 0.00 0.00 38.70 4.26 F
2176 2229 0.322456 TGGCAAAGAGAACATCCGGG 60.322 55.0 0.00 0.00 0.00 5.73 F
2831 2884 0.323360 TCAAAATTCCTCGCAGGGGG 60.323 55.0 2.86 0.00 35.59 5.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2807 2860 0.179166 TGCGAGGAATTTTGATGCGC 60.179 50.0 0.0 0.0 42.87 6.09 R
3714 3829 0.947244 CCTCACAGGTCACTTGTTGC 59.053 55.0 0.0 0.0 0.00 4.17 R
3715 3830 0.947244 GCCTCACAGGTCACTTGTTG 59.053 55.0 0.0 0.0 37.80 3.33 R
4793 4980 0.029300 CTGCACAAAAGGACCACACG 59.971 55.0 0.0 0.0 0.00 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.695560 CCAAGAACCCGTCTCCAC 57.304 61.111 0.00 0.00 34.56 4.02
18 19 1.003718 CCAAGAACCCGTCTCCACC 60.004 63.158 0.00 0.00 34.56 4.61
40 41 1.469079 CCCGAAATTCAAATCCCACGC 60.469 52.381 0.00 0.00 0.00 5.34
68 69 1.305381 ACCCCCACGGAGAGAGAAG 60.305 63.158 0.00 0.00 34.64 2.85
208 223 2.115266 CCTTCCCCACACACCACC 59.885 66.667 0.00 0.00 0.00 4.61
209 224 2.762554 CCTTCCCCACACACCACCA 61.763 63.158 0.00 0.00 0.00 4.17
211 226 2.976494 CTTCCCCACACACCACCACC 62.976 65.000 0.00 0.00 0.00 4.61
212 227 3.814906 CCCCACACACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
300 315 0.623617 ATAAAACCCTCGCCCCTCCT 60.624 55.000 0.00 0.00 0.00 3.69
301 316 1.269703 TAAAACCCTCGCCCCTCCTC 61.270 60.000 0.00 0.00 0.00 3.71
305 320 3.834056 CCTCGCCCCTCCTCCCTA 61.834 72.222 0.00 0.00 0.00 3.53
306 321 2.522193 CTCGCCCCTCCTCCCTAC 60.522 72.222 0.00 0.00 0.00 3.18
307 322 4.153330 TCGCCCCTCCTCCCTACC 62.153 72.222 0.00 0.00 0.00 3.18
309 324 4.103928 GCCCCTCCTCCCTACCCA 62.104 72.222 0.00 0.00 0.00 4.51
310 325 2.040779 CCCCTCCTCCCTACCCAC 60.041 72.222 0.00 0.00 0.00 4.61
311 326 2.040779 CCCTCCTCCCTACCCACC 60.041 72.222 0.00 0.00 0.00 4.61
312 327 2.040779 CCTCCTCCCTACCCACCC 60.041 72.222 0.00 0.00 0.00 4.61
313 328 2.040779 CTCCTCCCTACCCACCCC 60.041 72.222 0.00 0.00 0.00 4.95
314 329 3.702623 TCCTCCCTACCCACCCCC 61.703 72.222 0.00 0.00 0.00 5.40
315 330 4.033251 CCTCCCTACCCACCCCCA 62.033 72.222 0.00 0.00 0.00 4.96
316 331 2.691252 CTCCCTACCCACCCCCAC 60.691 72.222 0.00 0.00 0.00 4.61
317 332 4.358181 TCCCTACCCACCCCCACC 62.358 72.222 0.00 0.00 0.00 4.61
320 335 4.364686 CTACCCACCCCCACCCCT 62.365 72.222 0.00 0.00 0.00 4.79
901 916 2.361865 AGAGCTTCGCGTCTCCCT 60.362 61.111 5.77 0.00 0.00 4.20
903 918 3.418744 GAGCTTCGCGTCTCCCTCC 62.419 68.421 5.77 0.00 0.00 4.30
906 921 4.689549 TTCGCGTCTCCCTCCCCA 62.690 66.667 5.77 0.00 0.00 4.96
966 987 0.046397 AAACCCTAGGGCCCAGATCT 59.954 55.000 28.88 4.81 39.32 2.75
1184 1208 0.322546 GGAATTGTCCAGAAGGGCGT 60.323 55.000 0.00 0.00 44.71 5.68
1301 1325 1.520342 CTGCTCCCGTGCTTCTAGC 60.520 63.158 0.00 0.00 42.82 3.42
1340 1364 1.354506 CTGCAAGCATAGCTTCGGC 59.645 57.895 0.50 4.36 46.77 5.54
1369 1394 1.050767 CGTTGTCCTCGTTCTCGAAC 58.949 55.000 0.00 0.00 45.61 3.95
1422 1447 3.001330 GGACTAAAATTCGAGATGGCACG 59.999 47.826 0.00 0.00 0.00 5.34
1481 1506 5.938125 TGGCTAGATACACTTCTTTTGTTCC 59.062 40.000 0.00 0.00 0.00 3.62
1539 1564 1.715585 CGCCTGTGAATAGCAACCG 59.284 57.895 0.00 0.00 0.00 4.44
1563 1588 2.596904 TAGCTTAGATGCGTGGAACC 57.403 50.000 0.00 0.00 38.13 3.62
1625 1651 9.985318 CAATTTAATCTGACTTGCTAGAAAGAG 57.015 33.333 17.92 5.19 0.00 2.85
1650 1703 9.588096 AGTTGTGAATTTAATAGGAAGTCCTTT 57.412 29.630 4.91 3.07 46.09 3.11
1691 1744 3.374367 CAGAGATTTGAGATGGTGCACTG 59.626 47.826 17.98 0.00 0.00 3.66
1745 1798 3.434641 CACTGGAACATCTAGCACTTGTG 59.565 47.826 0.00 0.00 38.20 3.33
1809 1862 4.943705 TGTTGAGGAATAATGAGGCAGAAC 59.056 41.667 0.00 0.00 0.00 3.01
1812 1865 4.081142 TGAGGAATAATGAGGCAGAACGAA 60.081 41.667 0.00 0.00 0.00 3.85
1813 1866 4.843728 AGGAATAATGAGGCAGAACGAAA 58.156 39.130 0.00 0.00 0.00 3.46
1830 1883 3.502211 ACGAAATTAGCACCTTTCAGTGG 59.498 43.478 0.00 0.00 38.24 4.00
1860 1913 3.126073 TGCACATCGCTTCTATCATGTC 58.874 45.455 0.00 0.00 43.06 3.06
1877 1930 9.880064 CTATCATGTCAATTTAGAGAGCATTTG 57.120 33.333 0.00 0.00 0.00 2.32
1904 1957 9.591792 TGTTCACAATTGATTTGTTCATGTTTA 57.408 25.926 13.59 0.00 46.51 2.01
1909 1962 9.053840 ACAATTGATTTGTTCATGTTTATTGCA 57.946 25.926 13.59 0.00 46.51 4.08
1966 2019 2.027745 TCTTCAGATCAAGCACAGGGAC 60.028 50.000 0.00 0.00 0.00 4.46
1992 2045 7.169308 CGTGTACATCCATGTAATAAGAAGGAC 59.831 40.741 0.00 0.00 44.11 3.85
2118 2171 3.566261 CGTGCTTCGGATGCAGTT 58.434 55.556 17.66 0.00 41.41 3.16
2119 2172 1.868997 CGTGCTTCGGATGCAGTTT 59.131 52.632 17.66 0.00 41.41 2.66
2124 2177 0.883833 CTTCGGATGCAGTTTTGGCT 59.116 50.000 0.00 0.00 0.00 4.75
2126 2179 0.250684 TCGGATGCAGTTTTGGCTGA 60.251 50.000 0.00 0.00 38.70 4.26
2176 2229 0.322456 TGGCAAAGAGAACATCCGGG 60.322 55.000 0.00 0.00 0.00 5.73
2181 2234 0.539051 AAGAGAACATCCGGGCAGAG 59.461 55.000 0.00 0.00 0.00 3.35
2182 2235 0.616111 AGAGAACATCCGGGCAGAGT 60.616 55.000 0.00 0.00 0.00 3.24
2207 2260 4.619973 CAACTTAAGGCTGATGCAAAACA 58.380 39.130 7.53 0.00 41.91 2.83
2209 2262 3.636300 ACTTAAGGCTGATGCAAAACACA 59.364 39.130 7.53 0.00 41.91 3.72
2273 2326 7.400339 TCTTAATAGAGTGGGTTCTTCTGATGT 59.600 37.037 0.00 0.00 0.00 3.06
2281 2334 2.354259 GTTCTTCTGATGTGGCAGAGG 58.646 52.381 0.00 0.00 44.93 3.69
2319 2372 0.398318 ACAAGAAGCTGGGTCAGTCC 59.602 55.000 0.00 0.00 33.43 3.85
2444 2497 2.345760 CCCATGGAACTGCAGTGGC 61.346 63.158 22.49 15.56 41.68 5.01
2526 2579 4.593206 ACTTCTACCCAGAATGAACAGACA 59.407 41.667 0.00 0.00 40.03 3.41
2550 2603 2.032681 ACGAAGGTTGCTGCTCCC 59.967 61.111 0.00 0.21 0.00 4.30
2619 2672 7.492669 GTGAGAAATAGCAAGCAAGTATACTCA 59.507 37.037 5.70 0.00 0.00 3.41
2708 2761 7.362142 CCAAATAGGTGAAAGAGGTAAAGAAGC 60.362 40.741 0.00 0.00 0.00 3.86
2761 2814 4.276926 GGGATAGTTTGATGAAGTGCCATC 59.723 45.833 0.00 0.00 42.38 3.51
2793 2846 7.319646 TGGAAGGTAATAATGCAATGTTTCAC 58.680 34.615 0.00 0.00 0.00 3.18
2797 2850 7.491682 AGGTAATAATGCAATGTTTCACCATC 58.508 34.615 6.12 0.00 0.00 3.51
2798 2851 7.123997 AGGTAATAATGCAATGTTTCACCATCA 59.876 33.333 6.12 0.00 0.00 3.07
2807 2860 2.012673 GTTTCACCATCAGCTGCCTAG 58.987 52.381 9.47 0.00 0.00 3.02
2828 2881 1.532505 CGCATCAAAATTCCTCGCAGG 60.533 52.381 0.00 0.00 36.46 4.85
2831 2884 0.323360 TCAAAATTCCTCGCAGGGGG 60.323 55.000 2.86 0.00 35.59 5.40
2866 2919 6.039605 TCTGAAATTGCAACTCTCATCAACAA 59.960 34.615 0.00 0.00 0.00 2.83
2956 3009 4.653801 TGCTATCAGTTAAGGGTATGCTCA 59.346 41.667 0.00 0.00 0.00 4.26
2968 3021 5.699143 AGGGTATGCTCAATTGCTTAGATT 58.301 37.500 0.00 0.00 0.00 2.40
3004 3062 4.748892 TCTGCAAGCACTACACTAGATTC 58.251 43.478 0.00 0.00 0.00 2.52
3123 3181 0.746563 GGCGGCTTGCTGGTATGTTA 60.747 55.000 0.00 0.00 45.43 2.41
3127 3185 3.802329 GCGGCTTGCTGGTATGTTATCTA 60.802 47.826 3.48 0.00 41.73 1.98
3130 3188 6.341316 CGGCTTGCTGGTATGTTATCTATAT 58.659 40.000 0.00 0.00 0.00 0.86
3165 3227 6.754675 ACAATTTAAAGTTGTAACCTGTGCAC 59.245 34.615 10.75 10.75 37.98 4.57
3181 3243 4.588899 TGTGCACTCCACTTAATTATGCT 58.411 39.130 19.41 0.00 44.92 3.79
3358 3420 6.019559 GGAAAAACAGTTTCAGAAGAACATGC 60.020 38.462 0.00 0.00 32.39 4.06
3542 3641 6.417258 TGATCAGGCATCAAAATGAGACTTA 58.583 36.000 0.00 0.00 38.68 2.24
3595 3702 1.277326 GACAGTTCGCATGTCGCATA 58.723 50.000 4.90 0.00 42.60 3.14
3605 3712 3.184986 CGCATGTCGCATAATGATCTTGA 59.815 43.478 0.00 0.00 42.60 3.02
3647 3762 2.812591 GCTATGTTCCTGATCATGCCAG 59.187 50.000 0.00 7.66 0.00 4.85
3655 3770 2.357009 CCTGATCATGCCAGTTACTTGC 59.643 50.000 1.15 1.15 0.00 4.01
3714 3829 3.444742 TGCAGAATTGTGATAAAGGCCTG 59.555 43.478 5.69 0.00 0.00 4.85
3715 3830 3.736126 GCAGAATTGTGATAAAGGCCTGC 60.736 47.826 5.69 0.00 37.85 4.85
3775 3890 8.849168 CAATGGCTGAATTATGGTTAGTTCATA 58.151 33.333 0.00 0.00 34.65 2.15
3838 3961 2.422597 TGTATTGCTGAACAACTCCCG 58.577 47.619 0.00 0.00 42.27 5.14
3991 4114 1.276138 TCTCGCACATGTGGATCTTGT 59.724 47.619 26.55 0.00 35.29 3.16
3992 4115 2.495669 TCTCGCACATGTGGATCTTGTA 59.504 45.455 26.55 0.00 33.92 2.41
3993 4116 3.132824 TCTCGCACATGTGGATCTTGTAT 59.867 43.478 26.55 0.00 33.92 2.29
3994 4117 3.457234 TCGCACATGTGGATCTTGTATC 58.543 45.455 26.55 5.43 33.92 2.24
3995 4118 3.132824 TCGCACATGTGGATCTTGTATCT 59.867 43.478 26.55 0.00 33.92 1.98
3996 4119 3.873361 CGCACATGTGGATCTTGTATCTT 59.127 43.478 26.55 0.00 33.92 2.40
3997 4120 4.260497 CGCACATGTGGATCTTGTATCTTG 60.260 45.833 26.55 0.00 33.92 3.02
4009 4132 7.278868 GGATCTTGTATCTTGTTCCTTACACAG 59.721 40.741 0.00 0.00 36.21 3.66
4149 4314 2.881513 GTGTCTGAGTGAGAGTGAGTGA 59.118 50.000 0.00 0.00 0.00 3.41
4150 4315 3.058293 GTGTCTGAGTGAGAGTGAGTGAG 60.058 52.174 0.00 0.00 0.00 3.51
4151 4316 3.146066 GTCTGAGTGAGAGTGAGTGAGT 58.854 50.000 0.00 0.00 0.00 3.41
4152 4317 3.058293 GTCTGAGTGAGAGTGAGTGAGTG 60.058 52.174 0.00 0.00 0.00 3.51
4174 4339 3.248602 GTCTGTCTGTTGCCAACTTACAG 59.751 47.826 24.62 24.62 41.75 2.74
4284 4450 2.925724 TGTTTGGTAACTCTGGTGGTG 58.074 47.619 0.00 0.00 35.24 4.17
4285 4451 1.607148 GTTTGGTAACTCTGGTGGTGC 59.393 52.381 0.00 0.00 37.61 5.01
4286 4452 0.840617 TTGGTAACTCTGGTGGTGCA 59.159 50.000 0.00 0.00 37.61 4.57
4287 4453 0.396435 TGGTAACTCTGGTGGTGCAG 59.604 55.000 0.00 0.00 37.61 4.41
4288 4454 0.955919 GGTAACTCTGGTGGTGCAGC 60.956 60.000 9.47 9.47 0.00 5.25
4298 4470 2.893441 TGGTGCAGCCAGAAACAAA 58.107 47.368 14.36 0.00 43.61 2.83
4415 4587 2.434336 TGTCTGAAGTAGTTGCTGGTGT 59.566 45.455 0.00 0.00 0.00 4.16
4422 4594 2.030185 AGTAGTTGCTGGTGTGTAGTCG 60.030 50.000 0.00 0.00 0.00 4.18
4476 4650 3.505680 AGATATAGCTCAGACTGCTTCGG 59.494 47.826 0.00 0.00 41.46 4.30
4487 4661 3.055530 AGACTGCTTCGGAACAGAATGAT 60.056 43.478 19.88 4.64 39.69 2.45
4488 4662 3.679389 ACTGCTTCGGAACAGAATGATT 58.321 40.909 19.88 0.00 39.69 2.57
4489 4663 4.074970 ACTGCTTCGGAACAGAATGATTT 58.925 39.130 19.88 1.72 39.69 2.17
4490 4664 4.154918 ACTGCTTCGGAACAGAATGATTTC 59.845 41.667 19.88 0.00 39.69 2.17
4491 4665 3.440173 TGCTTCGGAACAGAATGATTTCC 59.560 43.478 0.00 0.00 39.69 3.13
4492 4666 3.181496 GCTTCGGAACAGAATGATTTCCC 60.181 47.826 0.00 0.00 39.69 3.97
4494 4668 4.301072 TCGGAACAGAATGATTTCCCTT 57.699 40.909 0.00 0.00 39.69 3.95
4495 4669 4.261801 TCGGAACAGAATGATTTCCCTTC 58.738 43.478 0.00 0.00 39.69 3.46
4501 4678 7.148069 GGAACAGAATGATTTCCCTTCGTTTAT 60.148 37.037 0.00 0.00 39.69 1.40
4508 4685 3.947910 TTCCCTTCGTTTATCTGTCGT 57.052 42.857 0.00 0.00 0.00 4.34
4520 4697 5.900339 TTATCTGTCGTCGATTATTTGGC 57.100 39.130 0.00 0.00 0.00 4.52
4523 4700 3.130516 TCTGTCGTCGATTATTTGGCTCT 59.869 43.478 0.00 0.00 0.00 4.09
4525 4702 4.607955 TGTCGTCGATTATTTGGCTCTAG 58.392 43.478 0.00 0.00 0.00 2.43
4526 4703 4.337274 TGTCGTCGATTATTTGGCTCTAGA 59.663 41.667 0.00 0.00 0.00 2.43
4552 4739 0.541392 ATGTGCGATAGGGCAACTCA 59.459 50.000 0.00 0.00 45.93 3.41
4556 4743 0.733150 GCGATAGGGCAACTCAAACC 59.267 55.000 0.00 0.00 0.00 3.27
4570 4757 1.543802 TCAAACCCATGGACGCATTTC 59.456 47.619 15.22 0.00 0.00 2.17
4571 4758 1.271934 CAAACCCATGGACGCATTTCA 59.728 47.619 15.22 0.00 0.00 2.69
4574 4761 1.064463 ACCCATGGACGCATTTCATCT 60.064 47.619 15.22 0.00 0.00 2.90
4581 4768 4.297510 TGGACGCATTTCATCTGTTTTTG 58.702 39.130 0.00 0.00 0.00 2.44
4582 4769 4.202101 TGGACGCATTTCATCTGTTTTTGT 60.202 37.500 0.00 0.00 0.00 2.83
4583 4770 5.009110 TGGACGCATTTCATCTGTTTTTGTA 59.991 36.000 0.00 0.00 0.00 2.41
4584 4771 6.092748 GGACGCATTTCATCTGTTTTTGTAT 58.907 36.000 0.00 0.00 0.00 2.29
4585 4772 6.033831 GGACGCATTTCATCTGTTTTTGTATG 59.966 38.462 0.00 0.00 0.00 2.39
4586 4773 6.446318 ACGCATTTCATCTGTTTTTGTATGT 58.554 32.000 0.00 0.00 0.00 2.29
4587 4774 6.922957 ACGCATTTCATCTGTTTTTGTATGTT 59.077 30.769 0.00 0.00 0.00 2.71
4588 4775 7.437862 ACGCATTTCATCTGTTTTTGTATGTTT 59.562 29.630 0.00 0.00 0.00 2.83
4589 4776 7.736880 CGCATTTCATCTGTTTTTGTATGTTTG 59.263 33.333 0.00 0.00 0.00 2.93
4590 4777 8.011106 GCATTTCATCTGTTTTTGTATGTTTGG 58.989 33.333 0.00 0.00 0.00 3.28
4591 4778 8.497554 CATTTCATCTGTTTTTGTATGTTTGGG 58.502 33.333 0.00 0.00 0.00 4.12
4592 4779 6.723298 TCATCTGTTTTTGTATGTTTGGGT 57.277 33.333 0.00 0.00 0.00 4.51
4593 4780 6.744112 TCATCTGTTTTTGTATGTTTGGGTC 58.256 36.000 0.00 0.00 0.00 4.46
4594 4781 5.176407 TCTGTTTTTGTATGTTTGGGTCG 57.824 39.130 0.00 0.00 0.00 4.79
4595 4782 4.036971 TCTGTTTTTGTATGTTTGGGTCGG 59.963 41.667 0.00 0.00 0.00 4.79
4596 4783 3.054166 GTTTTTGTATGTTTGGGTCGGC 58.946 45.455 0.00 0.00 0.00 5.54
4597 4784 1.982660 TTTGTATGTTTGGGTCGGCA 58.017 45.000 0.00 0.00 0.00 5.69
4598 4785 2.208132 TTGTATGTTTGGGTCGGCAT 57.792 45.000 0.00 0.00 0.00 4.40
4599 4786 1.458398 TGTATGTTTGGGTCGGCATG 58.542 50.000 0.00 0.00 0.00 4.06
4600 4787 1.271652 TGTATGTTTGGGTCGGCATGT 60.272 47.619 0.00 0.00 0.00 3.21
4601 4788 1.132262 GTATGTTTGGGTCGGCATGTG 59.868 52.381 0.00 0.00 0.00 3.21
4602 4789 1.876497 ATGTTTGGGTCGGCATGTGC 61.876 55.000 0.00 0.00 41.14 4.57
4603 4790 2.203408 TTTGGGTCGGCATGTGCA 60.203 55.556 7.36 0.00 44.36 4.57
4604 4791 2.267351 TTTGGGTCGGCATGTGCAG 61.267 57.895 7.36 2.87 44.36 4.41
4605 4792 2.974692 TTTGGGTCGGCATGTGCAGT 62.975 55.000 7.36 0.00 44.36 4.40
4606 4793 2.672996 GGGTCGGCATGTGCAGTT 60.673 61.111 7.36 0.00 44.36 3.16
4607 4794 2.562912 GGTCGGCATGTGCAGTTG 59.437 61.111 7.36 0.00 44.36 3.16
4608 4795 2.260869 GGTCGGCATGTGCAGTTGT 61.261 57.895 7.36 0.00 44.36 3.32
4609 4796 1.207593 GTCGGCATGTGCAGTTGTC 59.792 57.895 7.36 0.00 44.36 3.18
4610 4797 1.071299 TCGGCATGTGCAGTTGTCT 59.929 52.632 7.36 0.00 44.36 3.41
4611 4798 1.208358 CGGCATGTGCAGTTGTCTG 59.792 57.895 7.36 0.00 44.36 3.51
4621 4808 0.588252 CAGTTGTCTGCTTTGGTCCG 59.412 55.000 0.00 0.00 34.79 4.79
4622 4809 1.166531 AGTTGTCTGCTTTGGTCCGC 61.167 55.000 0.00 0.00 0.00 5.54
4623 4810 2.250939 TTGTCTGCTTTGGTCCGCG 61.251 57.895 0.00 0.00 0.00 6.46
4624 4811 4.090057 GTCTGCTTTGGTCCGCGC 62.090 66.667 0.00 0.00 0.00 6.86
4638 4825 3.848830 GCGCGCGCATAAGTGACA 61.849 61.111 46.11 0.00 41.49 3.58
4639 4826 2.775423 CGCGCGCATAAGTGACAA 59.225 55.556 32.61 0.00 0.00 3.18
4640 4827 1.577616 CGCGCGCATAAGTGACAAC 60.578 57.895 32.61 0.00 0.00 3.32
4641 4828 1.226018 GCGCGCATAAGTGACAACC 60.226 57.895 29.10 0.00 0.00 3.77
4642 4829 1.423845 CGCGCATAAGTGACAACCC 59.576 57.895 8.75 0.00 0.00 4.11
4643 4830 1.295357 CGCGCATAAGTGACAACCCA 61.295 55.000 8.75 0.00 0.00 4.51
4644 4831 0.878416 GCGCATAAGTGACAACCCAA 59.122 50.000 0.30 0.00 0.00 4.12
4645 4832 1.472480 GCGCATAAGTGACAACCCAAT 59.528 47.619 0.30 0.00 0.00 3.16
4646 4833 2.731968 GCGCATAAGTGACAACCCAATG 60.732 50.000 0.30 0.00 0.00 2.82
4647 4834 2.487762 CGCATAAGTGACAACCCAATGT 59.512 45.455 0.00 0.00 35.90 2.71
4648 4835 3.670359 CGCATAAGTGACAACCCAATGTG 60.670 47.826 0.00 0.00 32.57 3.21
4649 4836 3.836949 CATAAGTGACAACCCAATGTGC 58.163 45.455 0.00 0.00 32.57 4.57
4650 4837 1.774110 AAGTGACAACCCAATGTGCA 58.226 45.000 0.00 0.00 32.57 4.57
4651 4838 1.321474 AGTGACAACCCAATGTGCAG 58.679 50.000 0.00 0.00 32.57 4.41
4652 4839 1.133823 AGTGACAACCCAATGTGCAGA 60.134 47.619 0.00 0.00 32.57 4.26
4653 4840 1.267806 GTGACAACCCAATGTGCAGAG 59.732 52.381 0.00 0.00 32.57 3.35
4654 4841 1.133823 TGACAACCCAATGTGCAGAGT 60.134 47.619 0.00 0.00 32.57 3.24
4655 4842 2.105649 TGACAACCCAATGTGCAGAGTA 59.894 45.455 0.00 0.00 32.57 2.59
4656 4843 3.146066 GACAACCCAATGTGCAGAGTAA 58.854 45.455 0.00 0.00 32.57 2.24
4657 4844 2.884639 ACAACCCAATGTGCAGAGTAAC 59.115 45.455 0.00 0.00 30.82 2.50
4658 4845 2.884012 CAACCCAATGTGCAGAGTAACA 59.116 45.455 0.00 0.00 0.00 2.41
4659 4846 2.504367 ACCCAATGTGCAGAGTAACAC 58.496 47.619 0.00 0.00 37.31 3.32
4660 4847 1.812571 CCCAATGTGCAGAGTAACACC 59.187 52.381 0.00 0.00 35.90 4.16
4661 4848 1.812571 CCAATGTGCAGAGTAACACCC 59.187 52.381 0.00 0.00 35.90 4.61
4662 4849 2.503331 CAATGTGCAGAGTAACACCCA 58.497 47.619 0.00 0.00 35.90 4.51
4663 4850 3.084039 CAATGTGCAGAGTAACACCCAT 58.916 45.455 0.00 0.00 35.90 4.00
4664 4851 2.949177 TGTGCAGAGTAACACCCATT 57.051 45.000 0.00 0.00 35.90 3.16
4665 4852 3.222173 TGTGCAGAGTAACACCCATTT 57.778 42.857 0.00 0.00 35.90 2.32
4666 4853 3.146066 TGTGCAGAGTAACACCCATTTC 58.854 45.455 0.00 0.00 35.90 2.17
4667 4854 3.146066 GTGCAGAGTAACACCCATTTCA 58.854 45.455 0.00 0.00 0.00 2.69
4668 4855 3.568007 GTGCAGAGTAACACCCATTTCAA 59.432 43.478 0.00 0.00 0.00 2.69
4669 4856 3.820467 TGCAGAGTAACACCCATTTCAAG 59.180 43.478 0.00 0.00 0.00 3.02
4670 4857 3.821033 GCAGAGTAACACCCATTTCAAGT 59.179 43.478 0.00 0.00 0.00 3.16
4671 4858 4.278419 GCAGAGTAACACCCATTTCAAGTT 59.722 41.667 0.00 0.00 0.00 2.66
4672 4859 5.562890 GCAGAGTAACACCCATTTCAAGTTC 60.563 44.000 0.00 0.00 0.00 3.01
4673 4860 4.755123 AGAGTAACACCCATTTCAAGTTCG 59.245 41.667 0.00 0.00 0.00 3.95
4674 4861 4.457466 AGTAACACCCATTTCAAGTTCGT 58.543 39.130 0.00 0.00 0.00 3.85
4675 4862 4.885325 AGTAACACCCATTTCAAGTTCGTT 59.115 37.500 0.00 0.00 0.00 3.85
4676 4863 4.729227 AACACCCATTTCAAGTTCGTTT 57.271 36.364 0.00 0.00 0.00 3.60
4677 4864 4.040445 ACACCCATTTCAAGTTCGTTTG 57.960 40.909 0.00 0.00 0.00 2.93
4678 4865 3.445805 ACACCCATTTCAAGTTCGTTTGT 59.554 39.130 0.00 0.00 0.00 2.83
4679 4866 4.081917 ACACCCATTTCAAGTTCGTTTGTT 60.082 37.500 0.00 0.00 0.00 2.83
4680 4867 4.267452 CACCCATTTCAAGTTCGTTTGTTG 59.733 41.667 0.00 0.00 0.00 3.33
4681 4868 4.081917 ACCCATTTCAAGTTCGTTTGTTGT 60.082 37.500 0.00 0.00 0.00 3.32
4682 4869 4.867608 CCCATTTCAAGTTCGTTTGTTGTT 59.132 37.500 0.00 0.00 0.00 2.83
4683 4870 5.350091 CCCATTTCAAGTTCGTTTGTTGTTT 59.650 36.000 0.00 0.00 0.00 2.83
4684 4871 6.239945 CCATTTCAAGTTCGTTTGTTGTTTG 58.760 36.000 0.00 0.00 0.00 2.93
4685 4872 6.128688 CCATTTCAAGTTCGTTTGTTGTTTGT 60.129 34.615 0.00 0.00 0.00 2.83
4686 4873 5.814314 TTCAAGTTCGTTTGTTGTTTGTG 57.186 34.783 0.00 0.00 0.00 3.33
4687 4874 4.861210 TCAAGTTCGTTTGTTGTTTGTGT 58.139 34.783 0.00 0.00 0.00 3.72
4688 4875 4.677378 TCAAGTTCGTTTGTTGTTTGTGTG 59.323 37.500 0.00 0.00 0.00 3.82
4689 4876 3.570559 AGTTCGTTTGTTGTTTGTGTGG 58.429 40.909 0.00 0.00 0.00 4.17
4690 4877 3.253677 AGTTCGTTTGTTGTTTGTGTGGA 59.746 39.130 0.00 0.00 0.00 4.02
4691 4878 3.204597 TCGTTTGTTGTTTGTGTGGAC 57.795 42.857 0.00 0.00 0.00 4.02
4692 4879 1.908247 CGTTTGTTGTTTGTGTGGACG 59.092 47.619 0.00 0.00 0.00 4.79
4693 4880 1.651631 GTTTGTTGTTTGTGTGGACGC 59.348 47.619 0.00 0.00 0.00 5.19
4694 4881 0.881796 TTGTTGTTTGTGTGGACGCA 59.118 45.000 0.00 0.00 34.11 5.24
4695 4882 1.098869 TGTTGTTTGTGTGGACGCAT 58.901 45.000 0.00 0.00 36.14 4.73
4696 4883 2.289565 TGTTGTTTGTGTGGACGCATA 58.710 42.857 0.00 0.00 36.14 3.14
4697 4884 2.881513 TGTTGTTTGTGTGGACGCATAT 59.118 40.909 0.00 0.00 36.14 1.78
4698 4885 3.058570 TGTTGTTTGTGTGGACGCATATC 60.059 43.478 0.00 0.00 36.14 1.63
4699 4886 2.080693 TGTTTGTGTGGACGCATATCC 58.919 47.619 0.00 0.00 39.45 2.59
4700 4887 1.062002 GTTTGTGTGGACGCATATCCG 59.938 52.381 0.00 0.00 42.24 4.18
4702 4889 2.108157 TGTGGACGCATATCCGCC 59.892 61.111 9.13 0.00 46.94 6.13
4703 4890 2.665185 GTGGACGCATATCCGCCC 60.665 66.667 1.57 0.00 42.51 6.13
4704 4891 2.842462 TGGACGCATATCCGCCCT 60.842 61.111 0.00 0.00 42.24 5.19
4705 4892 1.532078 TGGACGCATATCCGCCCTA 60.532 57.895 0.00 0.00 42.24 3.53
4706 4893 1.116536 TGGACGCATATCCGCCCTAA 61.117 55.000 0.00 0.00 42.24 2.69
4707 4894 0.034337 GGACGCATATCCGCCCTAAA 59.966 55.000 0.00 0.00 0.00 1.85
4708 4895 1.338769 GGACGCATATCCGCCCTAAAT 60.339 52.381 0.00 0.00 0.00 1.40
4709 4896 2.423577 GACGCATATCCGCCCTAAATT 58.576 47.619 0.00 0.00 0.00 1.82
4710 4897 2.151202 ACGCATATCCGCCCTAAATTG 58.849 47.619 0.00 0.00 0.00 2.32
4711 4898 2.224426 ACGCATATCCGCCCTAAATTGA 60.224 45.455 0.00 0.00 0.00 2.57
4712 4899 2.416547 CGCATATCCGCCCTAAATTGAG 59.583 50.000 0.00 0.00 0.00 3.02
4713 4900 2.162408 GCATATCCGCCCTAAATTGAGC 59.838 50.000 0.00 0.00 0.00 4.26
4716 4903 3.420943 CGCCCTAAATTGAGCGGG 58.579 61.111 0.00 0.00 44.64 6.13
4717 4904 2.186826 CGCCCTAAATTGAGCGGGG 61.187 63.158 0.00 0.00 44.64 5.73
4718 4905 1.076995 GCCCTAAATTGAGCGGGGT 60.077 57.895 0.00 0.00 39.28 4.95
4719 4906 0.683179 GCCCTAAATTGAGCGGGGTT 60.683 55.000 0.00 0.00 39.28 4.11
4720 4907 1.847328 CCCTAAATTGAGCGGGGTTT 58.153 50.000 0.00 0.00 32.91 3.27
4721 4908 1.476488 CCCTAAATTGAGCGGGGTTTG 59.524 52.381 0.00 0.00 32.91 2.93
4722 4909 2.167662 CCTAAATTGAGCGGGGTTTGT 58.832 47.619 0.00 0.00 0.00 2.83
4723 4910 2.094752 CCTAAATTGAGCGGGGTTTGTG 60.095 50.000 0.00 0.00 0.00 3.33
4724 4911 1.408969 AAATTGAGCGGGGTTTGTGT 58.591 45.000 0.00 0.00 0.00 3.72
4725 4912 0.958822 AATTGAGCGGGGTTTGTGTC 59.041 50.000 0.00 0.00 0.00 3.67
4726 4913 0.893727 ATTGAGCGGGGTTTGTGTCC 60.894 55.000 0.00 0.00 0.00 4.02
4727 4914 2.112297 GAGCGGGGTTTGTGTCCA 59.888 61.111 0.00 0.00 0.00 4.02
4728 4915 2.203294 AGCGGGGTTTGTGTCCAC 60.203 61.111 0.00 0.00 0.00 4.02
4729 4916 2.517402 GCGGGGTTTGTGTCCACA 60.517 61.111 0.00 0.00 39.98 4.17
4730 4917 1.901464 GCGGGGTTTGTGTCCACAT 60.901 57.895 0.20 0.00 41.52 3.21
4731 4918 1.956043 CGGGGTTTGTGTCCACATG 59.044 57.895 0.20 0.00 41.52 3.21
4732 4919 1.523154 CGGGGTTTGTGTCCACATGG 61.523 60.000 0.20 0.00 41.52 3.66
4733 4920 0.178975 GGGGTTTGTGTCCACATGGA 60.179 55.000 0.20 0.00 41.52 3.41
4743 4930 2.495155 TCCACATGGACAACAGATGG 57.505 50.000 0.00 0.00 39.78 3.51
4744 4931 1.984424 TCCACATGGACAACAGATGGA 59.016 47.619 0.00 0.00 42.01 3.41
4745 4932 2.577563 TCCACATGGACAACAGATGGAT 59.422 45.455 0.00 0.00 40.36 3.41
4746 4933 2.686405 CCACATGGACAACAGATGGATG 59.314 50.000 0.00 0.00 39.34 3.51
4747 4934 2.098607 CACATGGACAACAGATGGATGC 59.901 50.000 0.00 0.00 0.00 3.91
4748 4935 1.332686 CATGGACAACAGATGGATGCG 59.667 52.381 0.00 0.00 0.00 4.73
4749 4936 1.026182 TGGACAACAGATGGATGCGC 61.026 55.000 0.00 0.00 0.00 6.09
4750 4937 1.718757 GGACAACAGATGGATGCGCC 61.719 60.000 4.18 0.00 37.10 6.53
4751 4938 2.040213 GACAACAGATGGATGCGCCG 62.040 60.000 4.18 0.00 40.66 6.46
4752 4939 3.204827 AACAGATGGATGCGCCGC 61.205 61.111 4.18 0.00 40.66 6.53
4768 4955 4.773117 GCGTGTCCGTCTCGACCC 62.773 72.222 4.10 0.00 35.42 4.46
4769 4956 4.112341 CGTGTCCGTCTCGACCCC 62.112 72.222 0.00 0.00 35.42 4.95
4770 4957 2.987547 GTGTCCGTCTCGACCCCA 60.988 66.667 0.00 0.00 31.35 4.96
4771 4958 2.987547 TGTCCGTCTCGACCCCAC 60.988 66.667 0.00 0.00 31.35 4.61
4772 4959 2.675772 GTCCGTCTCGACCCCACT 60.676 66.667 0.00 0.00 0.00 4.00
4773 4960 2.116772 TCCGTCTCGACCCCACTT 59.883 61.111 0.00 0.00 0.00 3.16
4774 4961 2.261671 CCGTCTCGACCCCACTTG 59.738 66.667 0.00 0.00 0.00 3.16
4775 4962 2.432628 CGTCTCGACCCCACTTGC 60.433 66.667 0.00 0.00 0.00 4.01
4776 4963 2.932234 CGTCTCGACCCCACTTGCT 61.932 63.158 0.00 0.00 0.00 3.91
4777 4964 1.592400 CGTCTCGACCCCACTTGCTA 61.592 60.000 0.00 0.00 0.00 3.49
4778 4965 0.173708 GTCTCGACCCCACTTGCTAG 59.826 60.000 0.00 0.00 0.00 3.42
4779 4966 1.153549 CTCGACCCCACTTGCTAGC 60.154 63.158 8.10 8.10 0.00 3.42
4780 4967 2.125106 CGACCCCACTTGCTAGCC 60.125 66.667 13.29 0.00 0.00 3.93
4781 4968 2.954684 CGACCCCACTTGCTAGCCA 61.955 63.158 13.29 0.00 0.00 4.75
4782 4969 1.377333 GACCCCACTTGCTAGCCAC 60.377 63.158 13.29 0.00 0.00 5.01
4783 4970 2.044946 CCCCACTTGCTAGCCACC 60.045 66.667 13.29 0.00 0.00 4.61
4784 4971 2.044946 CCCACTTGCTAGCCACCC 60.045 66.667 13.29 0.00 0.00 4.61
4785 4972 2.756400 CCACTTGCTAGCCACCCA 59.244 61.111 13.29 0.00 0.00 4.51
4786 4973 1.074775 CCACTTGCTAGCCACCCAA 59.925 57.895 13.29 0.00 0.00 4.12
4787 4974 1.244019 CCACTTGCTAGCCACCCAAC 61.244 60.000 13.29 0.00 0.00 3.77
4788 4975 0.250901 CACTTGCTAGCCACCCAACT 60.251 55.000 13.29 0.00 0.00 3.16
4789 4976 1.003118 CACTTGCTAGCCACCCAACTA 59.997 52.381 13.29 0.00 0.00 2.24
4790 4977 1.003233 ACTTGCTAGCCACCCAACTAC 59.997 52.381 13.29 0.00 0.00 2.73
4791 4978 0.326927 TTGCTAGCCACCCAACTACC 59.673 55.000 13.29 0.00 0.00 3.18
4792 4979 0.546747 TGCTAGCCACCCAACTACCT 60.547 55.000 13.29 0.00 0.00 3.08
4793 4980 0.178301 GCTAGCCACCCAACTACCTC 59.822 60.000 2.29 0.00 0.00 3.85
4794 4981 0.460311 CTAGCCACCCAACTACCTCG 59.540 60.000 0.00 0.00 0.00 4.63
4795 4982 0.251922 TAGCCACCCAACTACCTCGT 60.252 55.000 0.00 0.00 0.00 4.18
4796 4983 1.375523 GCCACCCAACTACCTCGTG 60.376 63.158 0.00 0.00 0.00 4.35
4797 4984 2.055299 CCACCCAACTACCTCGTGT 58.945 57.895 0.00 0.00 0.00 4.49
4798 4985 0.320421 CCACCCAACTACCTCGTGTG 60.320 60.000 0.00 0.00 0.00 3.82
4799 4986 0.320421 CACCCAACTACCTCGTGTGG 60.320 60.000 0.00 0.00 0.00 4.17
4800 4987 0.761702 ACCCAACTACCTCGTGTGGT 60.762 55.000 0.00 0.00 40.92 4.16
4801 4988 0.037605 CCCAACTACCTCGTGTGGTC 60.038 60.000 0.00 0.00 37.75 4.02
4802 4989 0.037605 CCAACTACCTCGTGTGGTCC 60.038 60.000 0.00 0.00 37.75 4.46
4803 4990 0.966920 CAACTACCTCGTGTGGTCCT 59.033 55.000 0.00 0.00 37.75 3.85
4804 4991 1.343465 CAACTACCTCGTGTGGTCCTT 59.657 52.381 0.00 0.00 37.75 3.36
4805 4992 1.713297 ACTACCTCGTGTGGTCCTTT 58.287 50.000 0.00 0.00 41.22 3.11
4806 4993 2.044758 ACTACCTCGTGTGGTCCTTTT 58.955 47.619 0.00 0.00 41.22 2.27
4807 4994 2.224209 ACTACCTCGTGTGGTCCTTTTG 60.224 50.000 0.00 0.00 41.22 2.44
4808 4995 0.544697 ACCTCGTGTGGTCCTTTTGT 59.455 50.000 0.00 0.00 34.86 2.83
4809 4996 0.944386 CCTCGTGTGGTCCTTTTGTG 59.056 55.000 0.00 0.00 0.00 3.33
4810 4997 0.307760 CTCGTGTGGTCCTTTTGTGC 59.692 55.000 0.00 0.00 0.00 4.57
4811 4998 0.393132 TCGTGTGGTCCTTTTGTGCA 60.393 50.000 0.00 0.00 0.00 4.57
4812 4999 0.029300 CGTGTGGTCCTTTTGTGCAG 59.971 55.000 0.00 0.00 0.00 4.41
4813 5000 0.385390 GTGTGGTCCTTTTGTGCAGG 59.615 55.000 0.00 0.00 0.00 4.85
4814 5001 0.754957 TGTGGTCCTTTTGTGCAGGG 60.755 55.000 0.00 0.00 31.50 4.45
4815 5002 1.152567 TGGTCCTTTTGTGCAGGGG 60.153 57.895 0.00 0.00 31.50 4.79
4816 5003 1.908299 GGTCCTTTTGTGCAGGGGG 60.908 63.158 0.00 0.00 31.50 5.40
4817 5004 1.152546 GTCCTTTTGTGCAGGGGGT 60.153 57.895 0.00 0.00 31.50 4.95
4818 5005 0.759060 GTCCTTTTGTGCAGGGGGTT 60.759 55.000 0.00 0.00 31.50 4.11
4819 5006 0.758685 TCCTTTTGTGCAGGGGGTTG 60.759 55.000 0.00 0.00 31.50 3.77
4820 5007 1.747774 CTTTTGTGCAGGGGGTTGG 59.252 57.895 0.00 0.00 0.00 3.77
4821 5008 2.381838 CTTTTGTGCAGGGGGTTGGC 62.382 60.000 0.00 0.00 0.00 4.52
4822 5009 4.932105 TTGTGCAGGGGGTTGGCC 62.932 66.667 0.00 0.00 0.00 5.36
4826 5013 4.932105 GCAGGGGGTTGGCCACAA 62.932 66.667 3.88 0.00 40.92 3.33
4836 5023 4.643387 GGCCACAACGCCCACTCT 62.643 66.667 0.00 0.00 43.66 3.24
4837 5024 2.594592 GCCACAACGCCCACTCTT 60.595 61.111 0.00 0.00 0.00 2.85
4838 5025 2.617274 GCCACAACGCCCACTCTTC 61.617 63.158 0.00 0.00 0.00 2.87
4839 5026 1.071471 CCACAACGCCCACTCTTCT 59.929 57.895 0.00 0.00 0.00 2.85
4840 5027 0.951040 CCACAACGCCCACTCTTCTC 60.951 60.000 0.00 0.00 0.00 2.87
4841 5028 0.951040 CACAACGCCCACTCTTCTCC 60.951 60.000 0.00 0.00 0.00 3.71
4842 5029 1.376037 CAACGCCCACTCTTCTCCC 60.376 63.158 0.00 0.00 0.00 4.30
4843 5030 1.536662 AACGCCCACTCTTCTCCCT 60.537 57.895 0.00 0.00 0.00 4.20
4844 5031 1.545706 AACGCCCACTCTTCTCCCTC 61.546 60.000 0.00 0.00 0.00 4.30
4845 5032 1.684049 CGCCCACTCTTCTCCCTCT 60.684 63.158 0.00 0.00 0.00 3.69
4846 5033 1.671901 CGCCCACTCTTCTCCCTCTC 61.672 65.000 0.00 0.00 0.00 3.20
4847 5034 0.325203 GCCCACTCTTCTCCCTCTCT 60.325 60.000 0.00 0.00 0.00 3.10
4848 5035 1.775385 CCCACTCTTCTCCCTCTCTC 58.225 60.000 0.00 0.00 0.00 3.20
4849 5036 1.287739 CCCACTCTTCTCCCTCTCTCT 59.712 57.143 0.00 0.00 0.00 3.10
4850 5037 2.378038 CCACTCTTCTCCCTCTCTCTG 58.622 57.143 0.00 0.00 0.00 3.35
4851 5038 1.750778 CACTCTTCTCCCTCTCTCTGC 59.249 57.143 0.00 0.00 0.00 4.26
4852 5039 1.341976 ACTCTTCTCCCTCTCTCTGCC 60.342 57.143 0.00 0.00 0.00 4.85
4853 5040 1.006813 TCTTCTCCCTCTCTCTGCCT 58.993 55.000 0.00 0.00 0.00 4.75
4854 5041 2.174639 CTCTTCTCCCTCTCTCTGCCTA 59.825 54.545 0.00 0.00 0.00 3.93
4855 5042 2.788807 TCTTCTCCCTCTCTCTGCCTAT 59.211 50.000 0.00 0.00 0.00 2.57
4856 5043 2.969821 TCTCCCTCTCTCTGCCTATC 57.030 55.000 0.00 0.00 0.00 2.08
4857 5044 1.073125 TCTCCCTCTCTCTGCCTATCG 59.927 57.143 0.00 0.00 0.00 2.92
4858 5045 0.847373 TCCCTCTCTCTGCCTATCGT 59.153 55.000 0.00 0.00 0.00 3.73
4859 5046 2.039216 CTCCCTCTCTCTGCCTATCGTA 59.961 54.545 0.00 0.00 0.00 3.43
4860 5047 2.156098 CCCTCTCTCTGCCTATCGTAC 58.844 57.143 0.00 0.00 0.00 3.67
4861 5048 2.487445 CCCTCTCTCTGCCTATCGTACA 60.487 54.545 0.00 0.00 0.00 2.90
4862 5049 2.550606 CCTCTCTCTGCCTATCGTACAC 59.449 54.545 0.00 0.00 0.00 2.90
4863 5050 3.472652 CTCTCTCTGCCTATCGTACACT 58.527 50.000 0.00 0.00 0.00 3.55
4864 5051 3.468770 TCTCTCTGCCTATCGTACACTC 58.531 50.000 0.00 0.00 0.00 3.51
4865 5052 3.118371 TCTCTCTGCCTATCGTACACTCA 60.118 47.826 0.00 0.00 0.00 3.41
4866 5053 3.617284 TCTCTGCCTATCGTACACTCAA 58.383 45.455 0.00 0.00 0.00 3.02
4867 5054 3.377485 TCTCTGCCTATCGTACACTCAAC 59.623 47.826 0.00 0.00 0.00 3.18
4868 5055 3.086282 TCTGCCTATCGTACACTCAACA 58.914 45.455 0.00 0.00 0.00 3.33
4869 5056 3.128764 TCTGCCTATCGTACACTCAACAG 59.871 47.826 0.00 0.00 0.00 3.16
4870 5057 2.823747 TGCCTATCGTACACTCAACAGT 59.176 45.455 0.00 0.00 0.00 3.55
4871 5058 3.119602 TGCCTATCGTACACTCAACAGTC 60.120 47.826 0.00 0.00 0.00 3.51
4872 5059 3.119602 GCCTATCGTACACTCAACAGTCA 60.120 47.826 0.00 0.00 0.00 3.41
4873 5060 4.413087 CCTATCGTACACTCAACAGTCAC 58.587 47.826 0.00 0.00 0.00 3.67
4874 5061 4.082949 CCTATCGTACACTCAACAGTCACA 60.083 45.833 0.00 0.00 0.00 3.58
4875 5062 3.349488 TCGTACACTCAACAGTCACAG 57.651 47.619 0.00 0.00 0.00 3.66
4876 5063 2.686405 TCGTACACTCAACAGTCACAGT 59.314 45.455 0.00 0.00 0.00 3.55
4877 5064 3.043586 CGTACACTCAACAGTCACAGTC 58.956 50.000 0.00 0.00 0.00 3.51
4878 5065 3.488553 CGTACACTCAACAGTCACAGTCA 60.489 47.826 0.00 0.00 0.00 3.41
4879 5066 3.610040 ACACTCAACAGTCACAGTCAA 57.390 42.857 0.00 0.00 0.00 3.18
4880 5067 3.262420 ACACTCAACAGTCACAGTCAAC 58.738 45.455 0.00 0.00 0.00 3.18
4881 5068 2.609459 CACTCAACAGTCACAGTCAACC 59.391 50.000 0.00 0.00 0.00 3.77
4882 5069 2.213499 CTCAACAGTCACAGTCAACCC 58.787 52.381 0.00 0.00 0.00 4.11
4883 5070 1.837439 TCAACAGTCACAGTCAACCCT 59.163 47.619 0.00 0.00 0.00 4.34
4884 5071 1.942657 CAACAGTCACAGTCAACCCTG 59.057 52.381 0.00 0.00 38.45 4.45
4885 5072 0.469917 ACAGTCACAGTCAACCCTGG 59.530 55.000 0.00 0.00 36.75 4.45
4886 5073 0.886490 CAGTCACAGTCAACCCTGGC 60.886 60.000 0.00 0.00 36.75 4.85
4887 5074 1.961277 GTCACAGTCAACCCTGGCG 60.961 63.158 0.00 0.00 36.75 5.69
4888 5075 3.357079 CACAGTCAACCCTGGCGC 61.357 66.667 0.00 0.00 36.75 6.53
4889 5076 3.872603 ACAGTCAACCCTGGCGCA 61.873 61.111 10.83 0.00 36.75 6.09
4890 5077 3.357079 CAGTCAACCCTGGCGCAC 61.357 66.667 10.83 0.00 30.14 5.34
4891 5078 4.643387 AGTCAACCCTGGCGCACC 62.643 66.667 10.83 0.00 30.14 5.01
4892 5079 4.947147 GTCAACCCTGGCGCACCA 62.947 66.667 10.83 0.00 46.51 4.17
4914 5101 4.278956 GTGGAAGTACACGCCCAG 57.721 61.111 0.00 0.00 0.00 4.45
4915 5102 1.669440 GTGGAAGTACACGCCCAGA 59.331 57.895 0.00 0.00 0.00 3.86
4916 5103 0.389948 GTGGAAGTACACGCCCAGAG 60.390 60.000 0.00 0.00 0.00 3.35
4917 5104 1.448013 GGAAGTACACGCCCAGAGC 60.448 63.158 0.00 0.00 38.52 4.09
4927 5114 3.357079 CCCAGAGCGCACAACCAC 61.357 66.667 11.47 0.00 0.00 4.16
4928 5115 3.716006 CCAGAGCGCACAACCACG 61.716 66.667 11.47 0.00 0.00 4.94
4929 5116 2.661537 CAGAGCGCACAACCACGA 60.662 61.111 11.47 0.00 0.00 4.35
4930 5117 2.356313 AGAGCGCACAACCACGAG 60.356 61.111 11.47 0.00 0.00 4.18
4931 5118 2.355837 GAGCGCACAACCACGAGA 60.356 61.111 11.47 0.00 0.00 4.04
4932 5119 2.658707 GAGCGCACAACCACGAGAC 61.659 63.158 11.47 0.00 0.00 3.36
4933 5120 4.059459 GCGCACAACCACGAGACG 62.059 66.667 0.30 0.00 0.00 4.18
4934 5121 2.354188 CGCACAACCACGAGACGA 60.354 61.111 0.00 0.00 0.00 4.20
4935 5122 2.365068 CGCACAACCACGAGACGAG 61.365 63.158 0.00 0.00 0.00 4.18
4936 5123 2.658707 GCACAACCACGAGACGAGC 61.659 63.158 0.00 0.00 0.00 5.03
4937 5124 1.007271 CACAACCACGAGACGAGCT 60.007 57.895 0.00 0.00 0.00 4.09
4938 5125 1.004277 CACAACCACGAGACGAGCTC 61.004 60.000 2.73 2.73 40.38 4.09
4939 5126 1.444553 CAACCACGAGACGAGCTCC 60.445 63.158 8.47 0.00 40.70 4.70
4940 5127 1.604023 AACCACGAGACGAGCTCCT 60.604 57.895 8.47 0.00 40.70 3.69
4941 5128 1.587933 AACCACGAGACGAGCTCCTC 61.588 60.000 8.47 8.97 40.70 3.71
4942 5129 2.766400 CCACGAGACGAGCTCCTCC 61.766 68.421 8.47 0.00 40.70 4.30
4943 5130 1.747367 CACGAGACGAGCTCCTCCT 60.747 63.158 8.47 2.31 40.70 3.69
4944 5131 1.450669 ACGAGACGAGCTCCTCCTC 60.451 63.158 8.47 10.85 40.70 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.609794 GGAGGTGGAGACGGGTTCT 60.610 63.158 0.00 0.00 37.23 3.01
4 5 2.657066 GGGAGGTGGAGACGGGTTC 61.657 68.421 0.00 0.00 0.00 3.62
5 6 2.606826 GGGAGGTGGAGACGGGTT 60.607 66.667 0.00 0.00 0.00 4.11
7 8 4.753662 TCGGGAGGTGGAGACGGG 62.754 72.222 0.00 0.00 0.00 5.28
8 9 1.614241 ATTTCGGGAGGTGGAGACGG 61.614 60.000 0.00 0.00 0.00 4.79
9 10 0.249398 AATTTCGGGAGGTGGAGACG 59.751 55.000 0.00 0.00 0.00 4.18
17 18 2.427095 GTGGGATTTGAATTTCGGGAGG 59.573 50.000 0.00 0.00 0.00 4.30
18 19 2.097466 CGTGGGATTTGAATTTCGGGAG 59.903 50.000 0.00 0.00 0.00 4.30
51 52 0.614979 TTCTTCTCTCTCCGTGGGGG 60.615 60.000 0.00 0.00 37.02 5.40
52 53 1.490574 ATTCTTCTCTCTCCGTGGGG 58.509 55.000 0.00 0.00 0.00 4.96
56 57 3.056465 GGTGTGAATTCTTCTCTCTCCGT 60.056 47.826 7.05 0.00 0.00 4.69
208 223 4.041917 GCATGTGGCGTGGTGGTG 62.042 66.667 0.00 0.00 0.00 4.17
300 315 4.358181 GGTGGGGGTGGGTAGGGA 62.358 72.222 0.00 0.00 0.00 4.20
303 318 2.963399 TAGGGGTGGGGGTGGGTAG 61.963 68.421 0.00 0.00 0.00 3.18
304 319 2.880549 TAGGGGTGGGGGTGGGTA 60.881 66.667 0.00 0.00 0.00 3.69
305 320 4.688302 GTAGGGGTGGGGGTGGGT 62.688 72.222 0.00 0.00 0.00 4.51
1340 1364 0.735632 GAGGACAACGCAGAGCAGAG 60.736 60.000 0.00 0.00 0.00 3.35
1369 1394 0.615331 TCAAGACTGCTGGCTAAGGG 59.385 55.000 0.00 0.00 0.00 3.95
1422 1447 6.684686 TGTGAGACACTTTACTACATACACC 58.315 40.000 0.00 0.00 35.11 4.16
1465 1490 5.741011 ACAGAGTGGAACAAAAGAAGTGTA 58.259 37.500 0.00 0.00 44.16 2.90
1539 1564 3.782046 TCCACGCATCTAAGCTAAGAAC 58.218 45.455 0.00 0.00 0.00 3.01
1663 1716 5.293079 GCACCATCTCAAATCTCTGTTCTAC 59.707 44.000 0.00 0.00 0.00 2.59
1691 1744 5.226194 AGATAGATCCTCTGCCAAACATC 57.774 43.478 0.00 0.00 0.00 3.06
1712 1765 3.610040 TGTTCCAGTGTAGCCACATAG 57.390 47.619 0.00 0.00 44.39 2.23
1745 1798 0.109723 TGAGCCACAACCCTACAACC 59.890 55.000 0.00 0.00 0.00 3.77
1809 1862 3.670627 GCCACTGAAAGGTGCTAATTTCG 60.671 47.826 0.00 0.00 39.30 3.46
1812 1865 2.875296 TGCCACTGAAAGGTGCTAATT 58.125 42.857 0.00 0.00 39.30 1.40
1813 1866 2.558359 GTTGCCACTGAAAGGTGCTAAT 59.442 45.455 0.00 0.00 39.30 1.73
1860 1913 7.140705 TGTGAACACAAATGCTCTCTAAATTG 58.859 34.615 5.11 0.00 38.56 2.32
1909 1962 2.765135 CCCTCGGATCTGCATGATAGAT 59.235 50.000 11.37 11.37 37.59 1.98
1966 2019 7.169308 GTCCTTCTTATTACATGGATGTACACG 59.831 40.741 0.00 0.00 42.48 4.49
1992 2045 5.678107 GCCTTCAGCAGAAAATTGAGGTATG 60.678 44.000 0.00 0.00 42.97 2.39
1998 2051 1.068333 GCGCCTTCAGCAGAAAATTGA 60.068 47.619 0.00 0.00 44.04 2.57
2039 2092 1.452108 GTCCGAGGCAATGAAGGGG 60.452 63.158 0.00 0.00 0.00 4.79
2118 2171 3.815856 TCATGCAAACTTTCAGCCAAA 57.184 38.095 0.00 0.00 0.00 3.28
2119 2172 3.655486 CATCATGCAAACTTTCAGCCAA 58.345 40.909 0.00 0.00 0.00 4.52
2181 2234 2.030007 TGCATCAGCCTTAAGTTGCAAC 60.030 45.455 22.17 22.17 37.47 4.17
2182 2235 2.237643 TGCATCAGCCTTAAGTTGCAA 58.762 42.857 0.00 0.00 37.47 4.08
2194 2247 2.780065 TCACTGTGTTTTGCATCAGC 57.220 45.000 7.79 0.00 42.57 4.26
2207 2260 5.587844 GCATCACTCATCCTATTTTCACTGT 59.412 40.000 0.00 0.00 0.00 3.55
2209 2262 5.587844 GTGCATCACTCATCCTATTTTCACT 59.412 40.000 0.00 0.00 0.00 3.41
2273 2326 1.906574 AGAACGGATTTACCTCTGCCA 59.093 47.619 0.00 0.00 36.31 4.92
2281 2334 7.662604 TCTTGTAAGGAAAGAACGGATTTAC 57.337 36.000 0.00 0.00 30.79 2.01
2319 2372 7.414873 CCACATTCTGATGGATCACTAACTTTG 60.415 40.741 0.00 0.00 38.34 2.77
2444 2497 2.813908 GACCGCGTGGCTTAGGTG 60.814 66.667 16.69 0.00 39.70 4.00
2466 2519 1.000359 ATCCCTTTTCCGCTTGGGG 60.000 57.895 0.00 0.00 40.05 4.96
2526 2579 1.065551 GCAGCAACCTTCGTGAACTTT 59.934 47.619 0.00 0.00 0.00 2.66
2535 2588 1.073897 ACTGGGAGCAGCAACCTTC 59.926 57.895 6.90 0.00 0.00 3.46
2550 2603 2.191128 GCCCAGATAATAGGCCACTG 57.809 55.000 5.01 4.40 41.00 3.66
2583 2636 8.689061 TGCTTGCTATTTCTCACATGATTTATT 58.311 29.630 0.00 0.00 0.00 1.40
2595 2648 8.425577 TTGAGTATACTTGCTTGCTATTTCTC 57.574 34.615 6.88 0.00 0.00 2.87
2619 2672 6.017109 CAGAGCGTACCATTGCCTTTATTATT 60.017 38.462 0.00 0.00 0.00 1.40
2687 2740 7.735326 ATAGCTTCTTTACCTCTTTCACCTA 57.265 36.000 0.00 0.00 0.00 3.08
2708 2761 7.505585 ACTTCTGGTCCTGAATTCTCTCTATAG 59.494 40.741 11.27 0.00 0.00 1.31
2761 2814 7.514784 TTGCATTATTACCTTCCATCATGAG 57.485 36.000 0.09 0.00 0.00 2.90
2793 2846 2.971413 GCGCTAGGCAGCTGATGG 60.971 66.667 20.43 8.18 46.26 3.51
2807 2860 0.179166 TGCGAGGAATTTTGATGCGC 60.179 50.000 0.00 0.00 42.87 6.09
2816 2869 2.677228 CACCCCCTGCGAGGAATT 59.323 61.111 4.00 0.00 37.67 2.17
2828 2881 2.286365 TTTCAGATTGTCACCACCCC 57.714 50.000 0.00 0.00 0.00 4.95
2831 2884 4.241590 TGCAATTTCAGATTGTCACCAC 57.758 40.909 0.00 0.00 0.00 4.16
2866 2919 3.511934 GTCCTATCCGAAGCCATAGTGAT 59.488 47.826 0.00 0.00 0.00 3.06
2968 3021 7.275183 AGTGCTTGCAGAATGTATGATTAGTA 58.725 34.615 0.00 0.00 39.31 1.82
3138 3196 7.916450 TGCACAGGTTACAACTTTAAATTGTAC 59.084 33.333 16.23 12.96 41.16 2.90
3165 3227 9.780413 GAAGAAAGAAAGCATAATTAAGTGGAG 57.220 33.333 0.00 0.00 0.00 3.86
3343 3405 2.031769 CGTGCAGCATGTTCTTCTGAAA 60.032 45.455 6.43 0.00 39.31 2.69
3358 3420 0.965866 TAGAGACCTCCACCGTGCAG 60.966 60.000 0.00 0.00 0.00 4.41
3542 3641 9.866655 TGATATTACCAAAATGAAATAGAGCCT 57.133 29.630 0.00 0.00 0.00 4.58
3595 3702 8.756927 TGAATGAGTCTAAGTCTCAAGATCATT 58.243 33.333 4.48 14.44 43.65 2.57
3605 3712 4.222588 AGCAGCTTGAATGAGTCTAAGTCT 59.777 41.667 0.00 0.00 0.00 3.24
3647 3762 3.492313 CGAATTTCCTGCAGCAAGTAAC 58.508 45.455 8.66 0.00 0.00 2.50
3655 3770 2.095059 CCTTCAACCGAATTTCCTGCAG 60.095 50.000 6.78 6.78 0.00 4.41
3714 3829 0.947244 CCTCACAGGTCACTTGTTGC 59.053 55.000 0.00 0.00 0.00 4.17
3715 3830 0.947244 GCCTCACAGGTCACTTGTTG 59.053 55.000 0.00 0.00 37.80 3.33
3775 3890 2.676632 TGTACGGTCAATATGCGGTT 57.323 45.000 0.00 0.00 0.00 4.44
3991 4114 8.429641 AGAGAAAACTGTGTAAGGAACAAGATA 58.570 33.333 0.00 0.00 40.63 1.98
3992 4115 7.283329 AGAGAAAACTGTGTAAGGAACAAGAT 58.717 34.615 0.00 0.00 40.63 2.40
3993 4116 6.650120 AGAGAAAACTGTGTAAGGAACAAGA 58.350 36.000 0.00 0.00 40.63 3.02
3994 4117 6.763610 AGAGAGAAAACTGTGTAAGGAACAAG 59.236 38.462 0.00 0.00 40.63 3.16
3995 4118 6.650120 AGAGAGAAAACTGTGTAAGGAACAA 58.350 36.000 0.00 0.00 40.63 2.83
3996 4119 6.235231 AGAGAGAAAACTGTGTAAGGAACA 57.765 37.500 0.00 0.00 35.06 3.18
3997 4120 6.761714 TGAAGAGAGAAAACTGTGTAAGGAAC 59.238 38.462 0.00 0.00 0.00 3.62
4183 4349 0.793861 GTTATTTCACGCGCCTGTGA 59.206 50.000 13.23 13.23 46.63 3.58
4242 4408 3.642141 ACATTGTGAAAACCCCAGAAGT 58.358 40.909 0.00 0.00 0.00 3.01
4258 4424 5.280945 CACCAGAGTTACCAAACAACATTG 58.719 41.667 0.00 0.00 38.12 2.82
4284 4450 1.670967 GGAGCATTTGTTTCTGGCTGC 60.671 52.381 0.00 0.00 35.84 5.25
4285 4451 1.891150 AGGAGCATTTGTTTCTGGCTG 59.109 47.619 0.00 0.00 34.44 4.85
4286 4452 1.891150 CAGGAGCATTTGTTTCTGGCT 59.109 47.619 0.00 0.00 37.56 4.75
4287 4453 1.670967 GCAGGAGCATTTGTTTCTGGC 60.671 52.381 5.06 0.00 41.58 4.85
4288 4454 1.891150 AGCAGGAGCATTTGTTTCTGG 59.109 47.619 5.06 0.00 45.49 3.86
4298 4470 5.990120 AAAAATCAGTTAAGCAGGAGCAT 57.010 34.783 0.00 0.00 45.49 3.79
4335 4507 4.380339 GGAGAAATGCTCAGCTCTTTTTCC 60.380 45.833 14.75 14.75 45.81 3.13
4336 4508 4.458642 AGGAGAAATGCTCAGCTCTTTTTC 59.541 41.667 0.00 2.98 45.81 2.29
4389 4561 3.743396 CAGCAACTACTTCAGACAGGTTC 59.257 47.826 0.00 0.00 0.00 3.62
4415 4587 2.697761 GCTCCAGCCGACGACTACA 61.698 63.158 0.00 0.00 34.31 2.74
4422 4594 3.695606 TGGACAGCTCCAGCCGAC 61.696 66.667 0.00 0.00 42.15 4.79
4476 4650 5.629079 AACGAAGGGAAATCATTCTGTTC 57.371 39.130 0.00 0.00 35.79 3.18
4487 4661 4.240096 GACGACAGATAAACGAAGGGAAA 58.760 43.478 0.00 0.00 0.00 3.13
4488 4662 3.671433 CGACGACAGATAAACGAAGGGAA 60.671 47.826 0.00 0.00 0.00 3.97
4489 4663 2.159476 CGACGACAGATAAACGAAGGGA 60.159 50.000 0.00 0.00 0.00 4.20
4490 4664 2.159476 TCGACGACAGATAAACGAAGGG 60.159 50.000 0.00 0.00 0.00 3.95
4491 4665 3.127081 TCGACGACAGATAAACGAAGG 57.873 47.619 0.00 0.00 0.00 3.46
4492 4666 6.971337 ATAATCGACGACAGATAAACGAAG 57.029 37.500 0.00 0.00 33.77 3.79
4494 4668 6.197655 CCAAATAATCGACGACAGATAAACGA 59.802 38.462 0.00 0.00 0.00 3.85
4495 4669 6.344800 CCAAATAATCGACGACAGATAAACG 58.655 40.000 0.00 0.00 0.00 3.60
4501 4678 3.130516 AGAGCCAAATAATCGACGACAGA 59.869 43.478 0.00 0.00 0.00 3.41
4529 4706 0.035534 TTGCCCTATCGCACATGTGT 60.036 50.000 26.01 10.04 38.83 3.72
4537 4724 0.733150 GGTTTGAGTTGCCCTATCGC 59.267 55.000 0.00 0.00 0.00 4.58
4539 4726 2.507407 TGGGTTTGAGTTGCCCTATC 57.493 50.000 0.00 0.00 42.77 2.08
4540 4727 2.624029 CCATGGGTTTGAGTTGCCCTAT 60.624 50.000 2.85 0.00 42.77 2.57
4552 4739 1.626686 TGAAATGCGTCCATGGGTTT 58.373 45.000 13.02 5.86 0.00 3.27
4556 4743 2.019249 ACAGATGAAATGCGTCCATGG 58.981 47.619 4.97 4.97 32.72 3.66
4570 4757 5.629020 CGACCCAAACATACAAAAACAGATG 59.371 40.000 0.00 0.00 0.00 2.90
4571 4758 5.278758 CCGACCCAAACATACAAAAACAGAT 60.279 40.000 0.00 0.00 0.00 2.90
4574 4761 3.491104 GCCGACCCAAACATACAAAAACA 60.491 43.478 0.00 0.00 0.00 2.83
4581 4768 1.132262 CACATGCCGACCCAAACATAC 59.868 52.381 0.00 0.00 0.00 2.39
4582 4769 1.458398 CACATGCCGACCCAAACATA 58.542 50.000 0.00 0.00 0.00 2.29
4583 4770 1.876497 GCACATGCCGACCCAAACAT 61.876 55.000 0.00 0.00 34.31 2.71
4584 4771 2.560119 GCACATGCCGACCCAAACA 61.560 57.895 0.00 0.00 34.31 2.83
4585 4772 2.258286 GCACATGCCGACCCAAAC 59.742 61.111 0.00 0.00 34.31 2.93
4586 4773 2.203408 TGCACATGCCGACCCAAA 60.203 55.556 0.49 0.00 41.18 3.28
4587 4774 2.672651 CTGCACATGCCGACCCAA 60.673 61.111 0.49 0.00 41.18 4.12
4588 4775 3.490031 AACTGCACATGCCGACCCA 62.490 57.895 0.49 0.00 41.18 4.51
4589 4776 2.672996 AACTGCACATGCCGACCC 60.673 61.111 0.49 0.00 41.18 4.46
4590 4777 2.187599 GACAACTGCACATGCCGACC 62.188 60.000 0.49 0.00 41.18 4.79
4591 4778 1.207593 GACAACTGCACATGCCGAC 59.792 57.895 0.49 0.00 41.18 4.79
4592 4779 1.071299 AGACAACTGCACATGCCGA 59.929 52.632 0.49 0.00 41.18 5.54
4593 4780 1.208358 CAGACAACTGCACATGCCG 59.792 57.895 0.49 0.00 41.18 5.69
4602 4789 0.588252 CGGACCAAAGCAGACAACTG 59.412 55.000 0.00 0.00 45.91 3.16
4603 4790 1.166531 GCGGACCAAAGCAGACAACT 61.167 55.000 0.00 0.00 0.00 3.16
4604 4791 1.282875 GCGGACCAAAGCAGACAAC 59.717 57.895 0.00 0.00 0.00 3.32
4605 4792 2.250939 CGCGGACCAAAGCAGACAA 61.251 57.895 0.00 0.00 0.00 3.18
4606 4793 2.664851 CGCGGACCAAAGCAGACA 60.665 61.111 0.00 0.00 0.00 3.41
4607 4794 4.090057 GCGCGGACCAAAGCAGAC 62.090 66.667 8.83 0.00 0.00 3.51
4620 4807 4.901895 GTCACTTATGCGCGCGCG 62.902 66.667 45.73 45.73 45.51 6.86
4621 4808 3.361455 TTGTCACTTATGCGCGCGC 62.361 57.895 45.02 45.02 42.35 6.86
4622 4809 1.577616 GTTGTCACTTATGCGCGCG 60.578 57.895 28.44 28.44 0.00 6.86
4623 4810 1.226018 GGTTGTCACTTATGCGCGC 60.226 57.895 27.26 27.26 0.00 6.86
4624 4811 1.295357 TGGGTTGTCACTTATGCGCG 61.295 55.000 0.00 0.00 0.00 6.86
4625 4812 0.878416 TTGGGTTGTCACTTATGCGC 59.122 50.000 0.00 0.00 0.00 6.09
4626 4813 2.487762 ACATTGGGTTGTCACTTATGCG 59.512 45.455 0.00 0.00 0.00 4.73
4627 4814 3.836949 CACATTGGGTTGTCACTTATGC 58.163 45.455 0.00 0.00 0.00 3.14
4628 4815 3.255395 TGCACATTGGGTTGTCACTTATG 59.745 43.478 0.00 0.00 0.00 1.90
4629 4816 3.495331 TGCACATTGGGTTGTCACTTAT 58.505 40.909 0.00 0.00 0.00 1.73
4630 4817 2.884012 CTGCACATTGGGTTGTCACTTA 59.116 45.455 0.00 0.00 0.00 2.24
4631 4818 1.682854 CTGCACATTGGGTTGTCACTT 59.317 47.619 0.00 0.00 0.00 3.16
4632 4819 1.133823 TCTGCACATTGGGTTGTCACT 60.134 47.619 0.00 0.00 0.00 3.41
4633 4820 1.267806 CTCTGCACATTGGGTTGTCAC 59.732 52.381 0.00 0.00 0.00 3.67
4634 4821 1.133823 ACTCTGCACATTGGGTTGTCA 60.134 47.619 0.00 0.00 0.00 3.58
4635 4822 1.609208 ACTCTGCACATTGGGTTGTC 58.391 50.000 0.00 0.00 0.00 3.18
4636 4823 2.884639 GTTACTCTGCACATTGGGTTGT 59.115 45.455 0.00 0.00 0.00 3.32
4637 4824 2.884012 TGTTACTCTGCACATTGGGTTG 59.116 45.455 0.00 0.00 0.00 3.77
4638 4825 2.884639 GTGTTACTCTGCACATTGGGTT 59.115 45.455 0.00 0.00 35.81 4.11
4639 4826 2.504367 GTGTTACTCTGCACATTGGGT 58.496 47.619 0.00 0.00 35.81 4.51
4640 4827 1.812571 GGTGTTACTCTGCACATTGGG 59.187 52.381 0.00 0.00 37.35 4.12
4641 4828 1.812571 GGGTGTTACTCTGCACATTGG 59.187 52.381 0.00 0.00 37.35 3.16
4642 4829 2.503331 TGGGTGTTACTCTGCACATTG 58.497 47.619 0.00 0.00 37.35 2.82
4643 4830 2.949177 TGGGTGTTACTCTGCACATT 57.051 45.000 0.00 0.00 37.35 2.71
4644 4831 3.439857 AATGGGTGTTACTCTGCACAT 57.560 42.857 0.00 0.00 37.35 3.21
4645 4832 2.949177 AATGGGTGTTACTCTGCACA 57.051 45.000 0.00 0.00 37.35 4.57
4646 4833 3.146066 TGAAATGGGTGTTACTCTGCAC 58.854 45.455 0.00 0.00 35.07 4.57
4647 4834 3.500448 TGAAATGGGTGTTACTCTGCA 57.500 42.857 0.00 0.00 0.00 4.41
4648 4835 3.821033 ACTTGAAATGGGTGTTACTCTGC 59.179 43.478 0.00 0.00 0.00 4.26
4649 4836 5.334105 CGAACTTGAAATGGGTGTTACTCTG 60.334 44.000 0.00 0.00 0.00 3.35
4650 4837 4.755123 CGAACTTGAAATGGGTGTTACTCT 59.245 41.667 0.00 0.00 0.00 3.24
4651 4838 4.514066 ACGAACTTGAAATGGGTGTTACTC 59.486 41.667 0.00 0.00 0.00 2.59
4652 4839 4.457466 ACGAACTTGAAATGGGTGTTACT 58.543 39.130 0.00 0.00 0.00 2.24
4653 4840 4.823790 ACGAACTTGAAATGGGTGTTAC 57.176 40.909 0.00 0.00 0.00 2.50
4654 4841 5.125739 ACAAACGAACTTGAAATGGGTGTTA 59.874 36.000 0.00 0.00 0.00 2.41
4655 4842 4.081917 ACAAACGAACTTGAAATGGGTGTT 60.082 37.500 0.00 0.00 0.00 3.32
4656 4843 3.445805 ACAAACGAACTTGAAATGGGTGT 59.554 39.130 0.00 0.00 0.00 4.16
4657 4844 4.040445 ACAAACGAACTTGAAATGGGTG 57.960 40.909 0.00 0.00 0.00 4.61
4658 4845 4.081917 ACAACAAACGAACTTGAAATGGGT 60.082 37.500 0.00 0.00 0.00 4.51
4659 4846 4.429108 ACAACAAACGAACTTGAAATGGG 58.571 39.130 0.00 0.00 0.00 4.00
4660 4847 6.128688 ACAAACAACAAACGAACTTGAAATGG 60.129 34.615 0.00 0.00 0.00 3.16
4661 4848 6.731505 CACAAACAACAAACGAACTTGAAATG 59.268 34.615 0.00 0.00 0.00 2.32
4662 4849 6.422400 ACACAAACAACAAACGAACTTGAAAT 59.578 30.769 0.00 0.00 0.00 2.17
4663 4850 5.749109 ACACAAACAACAAACGAACTTGAAA 59.251 32.000 0.00 0.00 0.00 2.69
4664 4851 5.174035 CACACAAACAACAAACGAACTTGAA 59.826 36.000 0.00 0.00 0.00 2.69
4665 4852 4.677378 CACACAAACAACAAACGAACTTGA 59.323 37.500 0.00 0.00 0.00 3.02
4666 4853 4.143431 CCACACAAACAACAAACGAACTTG 60.143 41.667 0.00 0.00 0.00 3.16
4667 4854 3.984633 CCACACAAACAACAAACGAACTT 59.015 39.130 0.00 0.00 0.00 2.66
4668 4855 3.253677 TCCACACAAACAACAAACGAACT 59.746 39.130 0.00 0.00 0.00 3.01
4669 4856 3.362534 GTCCACACAAACAACAAACGAAC 59.637 43.478 0.00 0.00 0.00 3.95
4670 4857 3.566523 GTCCACACAAACAACAAACGAA 58.433 40.909 0.00 0.00 0.00 3.85
4671 4858 2.412977 CGTCCACACAAACAACAAACGA 60.413 45.455 0.00 0.00 0.00 3.85
4672 4859 1.908247 CGTCCACACAAACAACAAACG 59.092 47.619 0.00 0.00 0.00 3.60
4673 4860 1.651631 GCGTCCACACAAACAACAAAC 59.348 47.619 0.00 0.00 0.00 2.93
4674 4861 1.269723 TGCGTCCACACAAACAACAAA 59.730 42.857 0.00 0.00 0.00 2.83
4675 4862 0.881796 TGCGTCCACACAAACAACAA 59.118 45.000 0.00 0.00 0.00 2.83
4676 4863 1.098869 ATGCGTCCACACAAACAACA 58.901 45.000 0.00 0.00 0.00 3.33
4677 4864 3.488489 GATATGCGTCCACACAAACAAC 58.512 45.455 0.00 0.00 0.00 3.32
4678 4865 2.486203 GGATATGCGTCCACACAAACAA 59.514 45.455 0.00 0.00 38.20 2.83
4679 4866 2.080693 GGATATGCGTCCACACAAACA 58.919 47.619 0.00 0.00 38.20 2.83
4680 4867 1.062002 CGGATATGCGTCCACACAAAC 59.938 52.381 8.66 0.00 38.21 2.93
4681 4868 1.364721 CGGATATGCGTCCACACAAA 58.635 50.000 8.66 0.00 38.21 2.83
4682 4869 1.087202 GCGGATATGCGTCCACACAA 61.087 55.000 18.21 0.00 38.21 3.33
4683 4870 1.520564 GCGGATATGCGTCCACACA 60.521 57.895 18.21 0.00 38.21 3.72
4684 4871 2.244651 GGCGGATATGCGTCCACAC 61.245 63.158 18.21 0.00 38.21 3.82
4685 4872 2.108157 GGCGGATATGCGTCCACA 59.892 61.111 18.21 0.00 38.21 4.17
4686 4873 1.812686 TAGGGCGGATATGCGTCCAC 61.813 60.000 36.60 20.63 38.21 4.02
4687 4874 1.116536 TTAGGGCGGATATGCGTCCA 61.117 55.000 36.60 22.15 38.21 4.02
4688 4875 0.034337 TTTAGGGCGGATATGCGTCC 59.966 55.000 30.38 30.38 35.06 4.79
4689 4876 2.094762 ATTTAGGGCGGATATGCGTC 57.905 50.000 18.21 15.90 35.06 5.19
4690 4877 2.151202 CAATTTAGGGCGGATATGCGT 58.849 47.619 18.21 0.86 35.06 5.24
4691 4878 2.416547 CTCAATTTAGGGCGGATATGCG 59.583 50.000 12.80 12.80 35.06 4.73
4692 4879 2.162408 GCTCAATTTAGGGCGGATATGC 59.838 50.000 0.00 0.00 0.00 3.14
4693 4880 2.416547 CGCTCAATTTAGGGCGGATATG 59.583 50.000 2.21 0.00 43.25 1.78
4694 4881 2.699954 CGCTCAATTTAGGGCGGATAT 58.300 47.619 2.21 0.00 43.25 1.63
4695 4882 2.163818 CGCTCAATTTAGGGCGGATA 57.836 50.000 2.21 0.00 43.25 2.59
4696 4883 3.006672 CGCTCAATTTAGGGCGGAT 57.993 52.632 2.21 0.00 43.25 4.18
4697 4884 4.532490 CGCTCAATTTAGGGCGGA 57.468 55.556 2.21 0.00 43.25 5.54
4699 4886 2.186826 CCCCGCTCAATTTAGGGCG 61.187 63.158 3.16 3.16 45.97 6.13
4700 4887 0.683179 AACCCCGCTCAATTTAGGGC 60.683 55.000 0.00 0.00 41.86 5.19
4701 4888 1.476488 CAAACCCCGCTCAATTTAGGG 59.524 52.381 0.00 0.00 43.88 3.53
4702 4889 2.094752 CACAAACCCCGCTCAATTTAGG 60.095 50.000 0.00 0.00 0.00 2.69
4703 4890 2.556622 ACACAAACCCCGCTCAATTTAG 59.443 45.455 0.00 0.00 0.00 1.85
4704 4891 2.554893 GACACAAACCCCGCTCAATTTA 59.445 45.455 0.00 0.00 0.00 1.40
4705 4892 1.339929 GACACAAACCCCGCTCAATTT 59.660 47.619 0.00 0.00 0.00 1.82
4706 4893 0.958822 GACACAAACCCCGCTCAATT 59.041 50.000 0.00 0.00 0.00 2.32
4707 4894 0.893727 GGACACAAACCCCGCTCAAT 60.894 55.000 0.00 0.00 0.00 2.57
4708 4895 1.527380 GGACACAAACCCCGCTCAA 60.527 57.895 0.00 0.00 0.00 3.02
4709 4896 2.112297 GGACACAAACCCCGCTCA 59.888 61.111 0.00 0.00 0.00 4.26
4710 4897 2.112297 TGGACACAAACCCCGCTC 59.888 61.111 0.00 0.00 0.00 5.03
4711 4898 2.203294 GTGGACACAAACCCCGCT 60.203 61.111 0.00 0.00 0.00 5.52
4712 4899 1.901464 ATGTGGACACAAACCCCGC 60.901 57.895 9.42 0.00 45.41 6.13
4713 4900 1.523154 CCATGTGGACACAAACCCCG 61.523 60.000 9.42 0.00 45.41 5.73
4714 4901 0.178975 TCCATGTGGACACAAACCCC 60.179 55.000 9.42 0.00 45.41 4.95
4715 4902 3.430473 TCCATGTGGACACAAACCC 57.570 52.632 9.42 0.00 45.41 4.11
4724 4911 1.984424 TCCATCTGTTGTCCATGTGGA 59.016 47.619 0.00 0.00 43.08 4.02
4725 4912 2.495155 TCCATCTGTTGTCCATGTGG 57.505 50.000 0.00 0.00 0.00 4.17
4726 4913 2.098607 GCATCCATCTGTTGTCCATGTG 59.901 50.000 0.00 0.00 0.00 3.21
4727 4914 2.372264 GCATCCATCTGTTGTCCATGT 58.628 47.619 0.00 0.00 0.00 3.21
4728 4915 1.332686 CGCATCCATCTGTTGTCCATG 59.667 52.381 0.00 0.00 0.00 3.66
4729 4916 1.671979 CGCATCCATCTGTTGTCCAT 58.328 50.000 0.00 0.00 0.00 3.41
4730 4917 1.026182 GCGCATCCATCTGTTGTCCA 61.026 55.000 0.30 0.00 0.00 4.02
4731 4918 1.718757 GGCGCATCCATCTGTTGTCC 61.719 60.000 10.83 0.00 34.01 4.02
4732 4919 1.723870 GGCGCATCCATCTGTTGTC 59.276 57.895 10.83 0.00 34.01 3.18
4733 4920 2.108514 CGGCGCATCCATCTGTTGT 61.109 57.895 10.83 0.00 34.01 3.32
4734 4921 2.711311 CGGCGCATCCATCTGTTG 59.289 61.111 10.83 0.00 34.01 3.33
4735 4922 3.204827 GCGGCGCATCCATCTGTT 61.205 61.111 29.21 0.00 34.01 3.16
4751 4938 4.773117 GGGTCGAGACGGACACGC 62.773 72.222 0.00 0.00 46.04 5.34
4752 4939 4.112341 GGGGTCGAGACGGACACG 62.112 72.222 0.00 0.00 41.34 4.49
4753 4940 2.987547 TGGGGTCGAGACGGACAC 60.988 66.667 0.00 0.00 39.66 3.67
4754 4941 2.987547 GTGGGGTCGAGACGGACA 60.988 66.667 0.00 0.00 38.70 4.02
4755 4942 2.273912 AAGTGGGGTCGAGACGGAC 61.274 63.158 0.00 0.00 36.18 4.79
4756 4943 2.116772 AAGTGGGGTCGAGACGGA 59.883 61.111 0.00 0.00 0.00 4.69
4757 4944 2.261671 CAAGTGGGGTCGAGACGG 59.738 66.667 0.00 0.00 0.00 4.79
4758 4945 1.592400 TAGCAAGTGGGGTCGAGACG 61.592 60.000 0.00 0.00 0.00 4.18
4759 4946 0.173708 CTAGCAAGTGGGGTCGAGAC 59.826 60.000 0.00 0.00 0.00 3.36
4760 4947 1.605058 GCTAGCAAGTGGGGTCGAGA 61.605 60.000 10.63 0.00 0.00 4.04
4761 4948 1.153549 GCTAGCAAGTGGGGTCGAG 60.154 63.158 10.63 0.00 0.00 4.04
4762 4949 2.656069 GGCTAGCAAGTGGGGTCGA 61.656 63.158 18.24 0.00 0.00 4.20
4763 4950 2.125106 GGCTAGCAAGTGGGGTCG 60.125 66.667 18.24 0.00 0.00 4.79
4764 4951 1.377333 GTGGCTAGCAAGTGGGGTC 60.377 63.158 18.24 0.00 0.00 4.46
4765 4952 2.757077 GTGGCTAGCAAGTGGGGT 59.243 61.111 18.24 0.00 0.00 4.95
4766 4953 2.044946 GGTGGCTAGCAAGTGGGG 60.045 66.667 18.24 0.00 0.00 4.96
4767 4954 2.044946 GGGTGGCTAGCAAGTGGG 60.045 66.667 18.24 0.00 0.00 4.61
4768 4955 1.074775 TTGGGTGGCTAGCAAGTGG 59.925 57.895 18.24 0.00 0.00 4.00
4769 4956 0.250901 AGTTGGGTGGCTAGCAAGTG 60.251 55.000 18.24 0.00 0.00 3.16
4770 4957 1.003233 GTAGTTGGGTGGCTAGCAAGT 59.997 52.381 18.24 7.16 0.00 3.16
4771 4958 1.679032 GGTAGTTGGGTGGCTAGCAAG 60.679 57.143 18.24 0.00 36.18 4.01
4772 4959 0.326927 GGTAGTTGGGTGGCTAGCAA 59.673 55.000 18.24 0.85 36.18 3.91
4773 4960 0.546747 AGGTAGTTGGGTGGCTAGCA 60.547 55.000 18.24 0.00 37.94 3.49
4774 4961 0.178301 GAGGTAGTTGGGTGGCTAGC 59.822 60.000 6.04 6.04 36.33 3.42
4775 4962 0.460311 CGAGGTAGTTGGGTGGCTAG 59.540 60.000 0.00 0.00 0.00 3.42
4776 4963 0.251922 ACGAGGTAGTTGGGTGGCTA 60.252 55.000 0.00 0.00 0.00 3.93
4777 4964 1.535687 ACGAGGTAGTTGGGTGGCT 60.536 57.895 0.00 0.00 0.00 4.75
4778 4965 1.375523 CACGAGGTAGTTGGGTGGC 60.376 63.158 0.00 0.00 0.00 5.01
4779 4966 0.320421 CACACGAGGTAGTTGGGTGG 60.320 60.000 0.00 0.00 40.05 4.61
4780 4967 0.320421 CCACACGAGGTAGTTGGGTG 60.320 60.000 0.00 0.00 43.10 4.61
4781 4968 0.761702 ACCACACGAGGTAGTTGGGT 60.762 55.000 0.00 0.00 40.98 4.51
4782 4969 0.037605 GACCACACGAGGTAGTTGGG 60.038 60.000 0.00 0.00 43.38 4.12
4783 4970 0.037605 GGACCACACGAGGTAGTTGG 60.038 60.000 0.00 0.00 43.38 3.77
4784 4971 0.966920 AGGACCACACGAGGTAGTTG 59.033 55.000 0.00 0.00 43.38 3.16
4785 4972 1.713297 AAGGACCACACGAGGTAGTT 58.287 50.000 0.00 0.00 43.38 2.24
4786 4973 1.713297 AAAGGACCACACGAGGTAGT 58.287 50.000 0.00 0.00 43.38 2.73
4787 4974 2.224209 ACAAAAGGACCACACGAGGTAG 60.224 50.000 0.00 0.00 43.38 3.18
4788 4975 1.764134 ACAAAAGGACCACACGAGGTA 59.236 47.619 0.00 0.00 43.38 3.08
4789 4976 0.544697 ACAAAAGGACCACACGAGGT 59.455 50.000 0.00 0.00 46.82 3.85
4790 4977 0.944386 CACAAAAGGACCACACGAGG 59.056 55.000 0.00 0.00 0.00 4.63
4791 4978 0.307760 GCACAAAAGGACCACACGAG 59.692 55.000 0.00 0.00 0.00 4.18
4792 4979 0.393132 TGCACAAAAGGACCACACGA 60.393 50.000 0.00 0.00 0.00 4.35
4793 4980 0.029300 CTGCACAAAAGGACCACACG 59.971 55.000 0.00 0.00 0.00 4.49
4794 4981 0.385390 CCTGCACAAAAGGACCACAC 59.615 55.000 0.00 0.00 36.91 3.82
4795 4982 0.754957 CCCTGCACAAAAGGACCACA 60.755 55.000 0.00 0.00 36.91 4.17
4796 4983 1.463553 CCCCTGCACAAAAGGACCAC 61.464 60.000 0.00 0.00 36.91 4.16
4797 4984 1.152567 CCCCTGCACAAAAGGACCA 60.153 57.895 0.00 0.00 36.91 4.02
4798 4985 1.908299 CCCCCTGCACAAAAGGACC 60.908 63.158 0.00 0.00 36.91 4.46
4799 4986 0.759060 AACCCCCTGCACAAAAGGAC 60.759 55.000 0.00 0.00 36.91 3.85
4800 4987 0.758685 CAACCCCCTGCACAAAAGGA 60.759 55.000 0.00 0.00 36.91 3.36
4801 4988 1.747774 CAACCCCCTGCACAAAAGG 59.252 57.895 0.00 0.00 34.31 3.11
4802 4989 1.747774 CCAACCCCCTGCACAAAAG 59.252 57.895 0.00 0.00 0.00 2.27
4803 4990 2.439104 GCCAACCCCCTGCACAAAA 61.439 57.895 0.00 0.00 0.00 2.44
4804 4991 2.841988 GCCAACCCCCTGCACAAA 60.842 61.111 0.00 0.00 0.00 2.83
4805 4992 4.932105 GGCCAACCCCCTGCACAA 62.932 66.667 0.00 0.00 0.00 3.33
4809 4996 4.932105 TTGTGGCCAACCCCCTGC 62.932 66.667 7.24 0.00 33.59 4.85
4810 4997 2.917227 GTTGTGGCCAACCCCCTG 60.917 66.667 7.24 0.00 44.25 4.45
4811 4998 4.596585 CGTTGTGGCCAACCCCCT 62.597 66.667 7.24 0.00 46.71 4.79
4820 5007 2.594592 AAGAGTGGGCGTTGTGGC 60.595 61.111 0.00 0.00 43.88 5.01
4821 5008 0.951040 GAGAAGAGTGGGCGTTGTGG 60.951 60.000 0.00 0.00 0.00 4.17
4822 5009 0.951040 GGAGAAGAGTGGGCGTTGTG 60.951 60.000 0.00 0.00 0.00 3.33
4823 5010 1.371558 GGAGAAGAGTGGGCGTTGT 59.628 57.895 0.00 0.00 0.00 3.32
4824 5011 1.376037 GGGAGAAGAGTGGGCGTTG 60.376 63.158 0.00 0.00 0.00 4.10
4825 5012 1.536662 AGGGAGAAGAGTGGGCGTT 60.537 57.895 0.00 0.00 0.00 4.84
4826 5013 1.985116 GAGGGAGAAGAGTGGGCGT 60.985 63.158 0.00 0.00 0.00 5.68
4827 5014 1.671901 GAGAGGGAGAAGAGTGGGCG 61.672 65.000 0.00 0.00 0.00 6.13
4828 5015 0.325203 AGAGAGGGAGAAGAGTGGGC 60.325 60.000 0.00 0.00 0.00 5.36
4829 5016 1.287739 AGAGAGAGGGAGAAGAGTGGG 59.712 57.143 0.00 0.00 0.00 4.61
4830 5017 2.378038 CAGAGAGAGGGAGAAGAGTGG 58.622 57.143 0.00 0.00 0.00 4.00
4831 5018 1.750778 GCAGAGAGAGGGAGAAGAGTG 59.249 57.143 0.00 0.00 0.00 3.51
4832 5019 1.341976 GGCAGAGAGAGGGAGAAGAGT 60.342 57.143 0.00 0.00 0.00 3.24
4833 5020 1.063717 AGGCAGAGAGAGGGAGAAGAG 60.064 57.143 0.00 0.00 0.00 2.85
4834 5021 1.006813 AGGCAGAGAGAGGGAGAAGA 58.993 55.000 0.00 0.00 0.00 2.87
4835 5022 2.746279 TAGGCAGAGAGAGGGAGAAG 57.254 55.000 0.00 0.00 0.00 2.85
4836 5023 2.488167 CGATAGGCAGAGAGAGGGAGAA 60.488 54.545 0.00 0.00 0.00 2.87
4837 5024 1.073125 CGATAGGCAGAGAGAGGGAGA 59.927 57.143 0.00 0.00 0.00 3.71
4838 5025 1.202879 ACGATAGGCAGAGAGAGGGAG 60.203 57.143 0.00 0.00 43.77 4.30
4839 5026 0.847373 ACGATAGGCAGAGAGAGGGA 59.153 55.000 0.00 0.00 43.77 4.20
4840 5027 2.156098 GTACGATAGGCAGAGAGAGGG 58.844 57.143 0.00 0.00 43.77 4.30
4841 5028 2.550606 GTGTACGATAGGCAGAGAGAGG 59.449 54.545 0.00 0.00 43.77 3.69
4842 5029 3.472652 AGTGTACGATAGGCAGAGAGAG 58.527 50.000 0.00 0.00 43.77 3.20
4843 5030 3.118371 TGAGTGTACGATAGGCAGAGAGA 60.118 47.826 0.00 0.00 43.77 3.10
4844 5031 3.206964 TGAGTGTACGATAGGCAGAGAG 58.793 50.000 0.00 0.00 43.77 3.20
4845 5032 3.277142 TGAGTGTACGATAGGCAGAGA 57.723 47.619 0.00 0.00 43.77 3.10
4846 5033 3.128764 TGTTGAGTGTACGATAGGCAGAG 59.871 47.826 0.00 0.00 43.77 3.35
4847 5034 3.086282 TGTTGAGTGTACGATAGGCAGA 58.914 45.455 0.00 0.00 43.77 4.26
4848 5035 3.119459 ACTGTTGAGTGTACGATAGGCAG 60.119 47.826 0.00 0.00 43.77 4.85
4849 5036 2.823747 ACTGTTGAGTGTACGATAGGCA 59.176 45.455 0.00 0.00 43.77 4.75
4850 5037 3.119602 TGACTGTTGAGTGTACGATAGGC 60.120 47.826 0.00 0.00 33.60 3.93
4851 5038 4.082949 TGTGACTGTTGAGTGTACGATAGG 60.083 45.833 0.00 0.00 33.60 2.57
4852 5039 5.043189 TGTGACTGTTGAGTGTACGATAG 57.957 43.478 0.00 0.00 35.20 2.08
4853 5040 4.517832 ACTGTGACTGTTGAGTGTACGATA 59.482 41.667 0.00 0.00 30.16 2.92
4854 5041 3.318275 ACTGTGACTGTTGAGTGTACGAT 59.682 43.478 0.00 0.00 30.16 3.73
4855 5042 2.686405 ACTGTGACTGTTGAGTGTACGA 59.314 45.455 0.00 0.00 30.16 3.43
4856 5043 3.043586 GACTGTGACTGTTGAGTGTACG 58.956 50.000 0.00 0.00 30.16 3.67
4857 5044 4.041740 TGACTGTGACTGTTGAGTGTAC 57.958 45.455 0.00 0.00 30.16 2.90
4858 5045 4.430007 GTTGACTGTGACTGTTGAGTGTA 58.570 43.478 0.00 0.00 30.16 2.90
4859 5046 3.262420 GTTGACTGTGACTGTTGAGTGT 58.738 45.455 0.00 0.00 30.16 3.55
4860 5047 2.609459 GGTTGACTGTGACTGTTGAGTG 59.391 50.000 0.00 0.00 30.16 3.51
4861 5048 2.420129 GGGTTGACTGTGACTGTTGAGT 60.420 50.000 0.00 0.00 33.98 3.41
4862 5049 2.158900 AGGGTTGACTGTGACTGTTGAG 60.159 50.000 0.00 0.00 0.00 3.02
4863 5050 1.837439 AGGGTTGACTGTGACTGTTGA 59.163 47.619 0.00 0.00 0.00 3.18
4864 5051 1.942657 CAGGGTTGACTGTGACTGTTG 59.057 52.381 0.00 0.00 33.81 3.33
4865 5052 1.134098 CCAGGGTTGACTGTGACTGTT 60.134 52.381 0.00 0.00 36.75 3.16
4866 5053 0.469917 CCAGGGTTGACTGTGACTGT 59.530 55.000 0.00 0.00 36.75 3.55
4867 5054 0.886490 GCCAGGGTTGACTGTGACTG 60.886 60.000 0.00 0.00 36.75 3.51
4868 5055 1.451936 GCCAGGGTTGACTGTGACT 59.548 57.895 0.00 0.00 36.75 3.41
4869 5056 1.961277 CGCCAGGGTTGACTGTGAC 60.961 63.158 0.00 0.00 36.75 3.67
4870 5057 2.425592 CGCCAGGGTTGACTGTGA 59.574 61.111 0.00 0.00 36.75 3.58
4871 5058 3.357079 GCGCCAGGGTTGACTGTG 61.357 66.667 0.00 0.00 36.75 3.66
4872 5059 3.872603 TGCGCCAGGGTTGACTGT 61.873 61.111 4.18 0.00 36.75 3.55
4873 5060 3.357079 GTGCGCCAGGGTTGACTG 61.357 66.667 4.18 0.00 38.21 3.51
4874 5061 4.643387 GGTGCGCCAGGGTTGACT 62.643 66.667 12.58 0.00 34.09 3.41
4875 5062 4.947147 TGGTGCGCCAGGGTTGAC 62.947 66.667 16.89 0.00 40.46 3.18
4897 5084 0.389948 CTCTGGGCGTGTACTTCCAC 60.390 60.000 0.00 0.00 0.00 4.02
4898 5085 1.972198 CTCTGGGCGTGTACTTCCA 59.028 57.895 0.00 0.00 0.00 3.53
4899 5086 1.448013 GCTCTGGGCGTGTACTTCC 60.448 63.158 0.00 0.00 0.00 3.46
4900 5087 4.187056 GCTCTGGGCGTGTACTTC 57.813 61.111 0.00 0.00 0.00 3.01
4910 5097 3.357079 GTGGTTGTGCGCTCTGGG 61.357 66.667 9.73 0.00 0.00 4.45
4911 5098 3.716006 CGTGGTTGTGCGCTCTGG 61.716 66.667 9.73 0.00 0.00 3.86
4912 5099 2.661537 TCGTGGTTGTGCGCTCTG 60.662 61.111 9.73 0.00 0.00 3.35
4913 5100 2.356313 CTCGTGGTTGTGCGCTCT 60.356 61.111 9.73 0.00 0.00 4.09
4914 5101 2.355837 TCTCGTGGTTGTGCGCTC 60.356 61.111 9.73 5.51 0.00 5.03
4915 5102 2.661866 GTCTCGTGGTTGTGCGCT 60.662 61.111 9.73 0.00 0.00 5.92
4916 5103 4.059459 CGTCTCGTGGTTGTGCGC 62.059 66.667 0.00 0.00 0.00 6.09
4917 5104 2.354188 TCGTCTCGTGGTTGTGCG 60.354 61.111 0.00 0.00 0.00 5.34
4918 5105 2.658707 GCTCGTCTCGTGGTTGTGC 61.659 63.158 0.00 0.00 0.00 4.57
4919 5106 1.004277 GAGCTCGTCTCGTGGTTGTG 61.004 60.000 0.00 0.00 31.54 3.33
4920 5107 1.286260 GAGCTCGTCTCGTGGTTGT 59.714 57.895 0.00 0.00 31.54 3.32
4921 5108 1.444553 GGAGCTCGTCTCGTGGTTG 60.445 63.158 7.83 0.00 42.82 3.77
4922 5109 1.587933 GAGGAGCTCGTCTCGTGGTT 61.588 60.000 25.45 0.00 42.82 3.67
4923 5110 2.034376 AGGAGCTCGTCTCGTGGT 59.966 61.111 7.83 0.00 42.82 4.16
4924 5111 2.766400 GGAGGAGCTCGTCTCGTGG 61.766 68.421 29.69 0.00 42.82 4.94
4925 5112 1.711060 GAGGAGGAGCTCGTCTCGTG 61.711 65.000 29.69 0.00 42.82 4.35
4926 5113 1.450669 GAGGAGGAGCTCGTCTCGT 60.451 63.158 29.69 21.34 42.82 4.18
4927 5114 2.530497 CGAGGAGGAGCTCGTCTCG 61.530 68.421 29.69 28.36 41.47 4.04
4928 5115 2.184167 CCGAGGAGGAGCTCGTCTC 61.184 68.421 29.69 23.22 45.00 3.36
4929 5116 2.124487 CCGAGGAGGAGCTCGTCT 60.124 66.667 29.69 18.59 45.00 4.18
4930 5117 3.213402 CCCGAGGAGGAGCTCGTC 61.213 72.222 24.90 24.90 45.00 4.20
4931 5118 4.824515 CCCCGAGGAGGAGCTCGT 62.825 72.222 9.04 9.04 45.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.