Multiple sequence alignment - TraesCS6B01G119800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G119800 chr6B 100.000 7302 0 0 1 7302 114373482 114366181 0.000000e+00 13485.0
1 TraesCS6B01G119800 chr6B 90.210 143 12 2 6613 6754 674714770 674714629 1.250000e-42 185.0
2 TraesCS6B01G119800 chr6D 95.689 3271 94 16 2024 5265 46018774 46015522 0.000000e+00 5216.0
3 TraesCS6B01G119800 chr6D 94.440 1313 58 8 718 2028 46020105 46018806 0.000000e+00 2006.0
4 TraesCS6B01G119800 chr6D 91.819 819 45 12 5801 6616 46014944 46014145 0.000000e+00 1122.0
5 TraesCS6B01G119800 chr6D 96.094 256 7 2 5404 5657 46015239 46014985 1.470000e-111 414.0
6 TraesCS6B01G119800 chr6D 89.841 315 29 2 1 314 46021547 46021235 1.140000e-107 401.0
7 TraesCS6B01G119800 chr6D 96.753 154 4 1 5251 5403 46015503 46015350 9.400000e-64 255.0
8 TraesCS6B01G119800 chr6D 93.069 101 4 3 7062 7160 46014111 46014012 2.120000e-30 145.0
9 TraesCS6B01G119800 chr6D 97.059 34 1 0 7144 7177 46014000 46013967 2.850000e-04 58.4
10 TraesCS6B01G119800 chr6D 100.000 28 0 0 6745 6772 46014146 46014119 1.300000e-02 52.8
11 TraesCS6B01G119800 chr6A 94.509 3424 101 36 2024 5401 60172384 60169002 0.000000e+00 5201.0
12 TraesCS6B01G119800 chr6A 93.553 1303 60 11 733 2024 60173709 60172420 0.000000e+00 1919.0
13 TraesCS6B01G119800 chr6A 93.980 1113 57 8 5404 6510 60168911 60167803 0.000000e+00 1676.0
14 TraesCS6B01G119800 chr6A 92.174 115 5 3 7067 7180 60167584 60167473 7.580000e-35 159.0
15 TraesCS6B01G119800 chr6A 94.000 50 3 0 5463 5512 566864 566815 7.860000e-10 76.8
16 TraesCS6B01G119800 chr3B 84.711 968 115 16 5658 6616 437966157 437967100 0.000000e+00 937.0
17 TraesCS6B01G119800 chr3B 91.339 254 21 1 317 570 201524587 201524839 5.420000e-91 346.0
18 TraesCS6B01G119800 chr3B 93.701 127 8 0 6620 6746 598118660 598118534 2.690000e-44 191.0
19 TraesCS6B01G119800 chr4D 86.452 871 91 15 5658 6524 163805733 163806580 0.000000e+00 929.0
20 TraesCS6B01G119800 chr4D 86.239 872 94 15 5658 6524 163883332 163884182 0.000000e+00 922.0
21 TraesCS6B01G119800 chr4D 98.000 50 1 0 5463 5512 320042976 320043025 3.630000e-13 87.9
22 TraesCS6B01G119800 chr4B 81.321 969 121 28 5658 6616 655411485 655410567 0.000000e+00 732.0
23 TraesCS6B01G119800 chr4B 90.714 140 13 0 6610 6749 82019112 82019251 3.480000e-43 187.0
24 TraesCS6B01G119800 chr4B 98.000 50 1 0 5463 5512 400685625 400685576 3.630000e-13 87.9
25 TraesCS6B01G119800 chrUn 92.032 251 19 1 320 570 93412051 93411802 1.170000e-92 351.0
26 TraesCS6B01G119800 chrUn 91.732 254 20 1 317 570 453003454 453003706 1.170000e-92 351.0
27 TraesCS6B01G119800 chrUn 91.633 251 20 1 320 570 93414419 93414170 5.420000e-91 346.0
28 TraesCS6B01G119800 chr5D 91.339 254 21 1 317 570 503215796 503216048 5.420000e-91 346.0
29 TraesCS6B01G119800 chr3A 91.633 251 19 2 320 570 672912427 672912179 5.420000e-91 346.0
30 TraesCS6B01G119800 chr2D 91.633 251 20 1 320 570 635584973 635584724 5.420000e-91 346.0
31 TraesCS6B01G119800 chr2A 90.734 259 22 2 317 574 335828475 335828732 1.950000e-90 344.0
32 TraesCS6B01G119800 chr2A 89.726 146 11 4 6610 6753 674599908 674600051 4.500000e-42 183.0
33 TraesCS6B01G119800 chr2A 89.726 146 11 4 6610 6753 674714881 674715024 4.500000e-42 183.0
34 TraesCS6B01G119800 chr3D 90.945 254 22 1 317 570 24170931 24171183 2.520000e-89 340.0
35 TraesCS6B01G119800 chr1D 82.294 401 48 9 4672 5064 179139314 179139699 7.060000e-85 326.0
36 TraesCS6B01G119800 chr1D 88.816 152 13 4 6618 6766 488630317 488630167 4.500000e-42 183.0
37 TraesCS6B01G119800 chr1D 92.308 52 3 1 5459 5510 28213442 28213492 1.020000e-08 73.1
38 TraesCS6B01G119800 chr1B 93.662 142 9 0 6619 6760 563743718 563743859 5.740000e-51 213.0
39 TraesCS6B01G119800 chr5B 91.241 137 12 0 6618 6754 411518799 411518935 3.480000e-43 187.0
40 TraesCS6B01G119800 chr2B 92.969 128 9 0 6620 6747 143487960 143487833 3.480000e-43 187.0
41 TraesCS6B01G119800 chr4A 98.000 50 1 0 5463 5512 153246216 153246167 3.630000e-13 87.9
42 TraesCS6B01G119800 chr1A 96.000 50 2 0 5463 5512 561331454 561331405 1.690000e-11 82.4
43 TraesCS6B01G119800 chr1A 93.750 48 2 1 5463 5509 534448281 534448234 3.650000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G119800 chr6B 114366181 114373482 7301 True 13485.000000 13485 100.000000 1 7302 1 chr6B.!!$R1 7301
1 TraesCS6B01G119800 chr6D 46013967 46021547 7580 True 1074.466667 5216 94.973778 1 7177 9 chr6D.!!$R1 7176
2 TraesCS6B01G119800 chr6A 60167473 60173709 6236 True 2238.750000 5201 93.554000 733 7180 4 chr6A.!!$R2 6447
3 TraesCS6B01G119800 chr3B 437966157 437967100 943 False 937.000000 937 84.711000 5658 6616 1 chr3B.!!$F2 958
4 TraesCS6B01G119800 chr4D 163805733 163806580 847 False 929.000000 929 86.452000 5658 6524 1 chr4D.!!$F1 866
5 TraesCS6B01G119800 chr4D 163883332 163884182 850 False 922.000000 922 86.239000 5658 6524 1 chr4D.!!$F2 866
6 TraesCS6B01G119800 chr4B 655410567 655411485 918 True 732.000000 732 81.321000 5658 6616 1 chr4B.!!$R2 958
7 TraesCS6B01G119800 chrUn 93411802 93414419 2617 True 348.500000 351 91.832500 320 570 2 chrUn.!!$R1 250

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
238 240 0.036483 ATGTTTTCGGGCCCAAATGC 60.036 50.000 24.92 15.89 0.00 3.56 F
1241 2231 1.068541 GTGGTTTTCGTTGATCCTGCC 60.069 52.381 0.00 0.00 0.00 4.85 F
1587 2577 0.035439 TGCTTGGGGAACTCGAATCC 60.035 55.000 8.14 8.14 36.16 3.01 F
2341 3397 0.604578 CTTGGTCCCATGTTTGCCAG 59.395 55.000 0.00 0.00 0.00 4.85 F
2749 3805 1.615392 GGACCAACTTGCTTGCTTGAT 59.385 47.619 0.00 0.00 0.00 2.57 F
3007 4063 1.634973 TCTTGAATCATGGGCTGGTGA 59.365 47.619 0.00 0.00 0.00 4.02 F
3281 4337 2.978156 TGAAAGGTGCCATTTCTCCT 57.022 45.000 11.67 0.00 37.51 3.69 F
4799 6873 1.529152 CTGCATCCAAGCCAAGTGCA 61.529 55.000 0.00 0.00 44.83 4.57 F
6007 8226 1.471676 CCCGACGAGGAGAAATTCAGG 60.472 57.143 0.00 0.00 45.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1282 2272 0.671796 ACACACACCGAATCGACAGA 59.328 50.000 3.36 0.00 0.00 3.41 R
2777 3833 0.385974 GCGACCATTGAACACACTGC 60.386 55.000 0.00 0.00 0.00 4.40 R
3467 4525 1.374343 TACGAGCACGCTCCCTACAG 61.374 60.000 13.24 1.05 43.96 2.74 R
4175 5385 6.183360 GCCATTACTTTCTAATGTTGAGCCAT 60.183 38.462 0.00 0.00 34.13 4.40 R
4452 6323 8.762645 TCTTTCTCAAGCCTTCTCAATTCTATA 58.237 33.333 0.00 0.00 0.00 1.31 R
4799 6873 1.071471 CTCTTCAACAGGCGGTGGT 59.929 57.895 0.00 0.00 0.00 4.16 R
5038 7112 1.134551 GCTGCCCAACCAGAAAACAAA 60.135 47.619 0.00 0.00 34.77 2.83 R
6042 8261 0.038310 CAGTCCAGGGAAAGGGGAAC 59.962 60.000 0.00 0.00 31.32 3.62 R
6817 9354 0.246635 GCCGACTCAGGTAAAGAGCA 59.753 55.000 0.00 0.00 36.58 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 2.187163 GGCCTTAGGAGGTGTCGC 59.813 66.667 0.69 0.00 45.44 5.19
109 110 4.690719 CAGCGTGGCGGTTGGGTA 62.691 66.667 0.00 0.00 34.62 3.69
111 112 2.979120 GCGTGGCGGTTGGGTAAA 60.979 61.111 0.00 0.00 0.00 2.01
116 117 0.178987 TGGCGGTTGGGTAAATGTGT 60.179 50.000 0.00 0.00 0.00 3.72
139 140 5.050431 GTGTAGCGATTTGGTTTTTGCAAAT 60.050 36.000 13.65 0.00 0.00 2.32
172 173 1.380380 GCTGCTTGGGCCACCTAAT 60.380 57.895 5.23 0.00 37.76 1.73
174 175 1.972872 CTGCTTGGGCCACCTAATAG 58.027 55.000 5.23 0.00 37.76 1.73
175 176 0.106719 TGCTTGGGCCACCTAATAGC 60.107 55.000 16.81 16.81 37.76 2.97
228 230 2.664916 CTGTTGGAGCAATGTTTTCGG 58.335 47.619 0.00 0.00 0.00 4.30
230 232 0.316841 TTGGAGCAATGTTTTCGGGC 59.683 50.000 0.00 0.00 0.00 6.13
238 240 0.036483 ATGTTTTCGGGCCCAAATGC 60.036 50.000 24.92 15.89 0.00 3.56
239 241 1.118356 TGTTTTCGGGCCCAAATGCT 61.118 50.000 24.92 0.00 0.00 3.79
280 282 6.647334 TGGATGTGCACTTTTGAGAAATTA 57.353 33.333 19.41 0.00 0.00 1.40
282 284 7.147312 TGGATGTGCACTTTTGAGAAATTAAG 58.853 34.615 19.41 0.00 0.00 1.85
284 286 6.147864 TGTGCACTTTTGAGAAATTAAGCT 57.852 33.333 19.41 0.00 0.00 3.74
295 297 9.970395 TTTGAGAAATTAAGCTGGCATAATATG 57.030 29.630 3.97 0.00 0.00 1.78
300 302 9.403110 GAAATTAAGCTGGCATAATATGTTGAG 57.597 33.333 1.92 0.00 0.00 3.02
307 309 7.027760 GCTGGCATAATATGTTGAGATTGATG 58.972 38.462 1.92 0.00 0.00 3.07
382 384 9.797556 AAATATTAAATCTCGGGTTTACAAAGC 57.202 29.630 0.00 0.00 35.75 3.51
412 414 9.862149 TTTCCTTTTGTAGACCTTTCTCTAATT 57.138 29.630 0.00 0.00 32.75 1.40
413 415 9.503399 TTCCTTTTGTAGACCTTTCTCTAATTC 57.497 33.333 0.00 0.00 32.75 2.17
414 416 8.881262 TCCTTTTGTAGACCTTTCTCTAATTCT 58.119 33.333 0.00 0.00 32.75 2.40
415 417 8.940952 CCTTTTGTAGACCTTTCTCTAATTCTG 58.059 37.037 0.00 0.00 32.75 3.02
416 418 7.907214 TTTGTAGACCTTTCTCTAATTCTGC 57.093 36.000 0.00 0.00 32.75 4.26
417 419 5.651530 TGTAGACCTTTCTCTAATTCTGCG 58.348 41.667 0.00 0.00 32.75 5.18
418 420 5.417894 TGTAGACCTTTCTCTAATTCTGCGA 59.582 40.000 0.00 0.00 32.75 5.10
419 421 5.606348 AGACCTTTCTCTAATTCTGCGAT 57.394 39.130 0.00 0.00 0.00 4.58
420 422 5.983540 AGACCTTTCTCTAATTCTGCGATT 58.016 37.500 0.00 0.00 0.00 3.34
421 423 5.814705 AGACCTTTCTCTAATTCTGCGATTG 59.185 40.000 0.00 0.00 0.00 2.67
422 424 4.333926 ACCTTTCTCTAATTCTGCGATTGC 59.666 41.667 0.00 0.00 43.20 3.56
423 425 4.574013 CCTTTCTCTAATTCTGCGATTGCT 59.426 41.667 6.47 0.00 43.34 3.91
424 426 5.065731 CCTTTCTCTAATTCTGCGATTGCTT 59.934 40.000 6.47 0.00 43.34 3.91
425 427 5.725110 TTCTCTAATTCTGCGATTGCTTC 57.275 39.130 6.47 0.00 43.34 3.86
426 428 5.016051 TCTCTAATTCTGCGATTGCTTCT 57.984 39.130 6.47 0.00 43.34 2.85
427 429 5.423015 TCTCTAATTCTGCGATTGCTTCTT 58.577 37.500 6.47 0.00 43.34 2.52
428 430 5.877012 TCTCTAATTCTGCGATTGCTTCTTT 59.123 36.000 6.47 0.00 43.34 2.52
429 431 6.372659 TCTCTAATTCTGCGATTGCTTCTTTT 59.627 34.615 6.47 0.00 43.34 2.27
430 432 6.913170 TCTAATTCTGCGATTGCTTCTTTTT 58.087 32.000 6.47 0.00 43.34 1.94
469 471 7.686438 TGGGAATCCAATATGAATTATGACG 57.314 36.000 0.09 0.00 40.73 4.35
470 472 7.230747 TGGGAATCCAATATGAATTATGACGT 58.769 34.615 0.09 0.00 40.73 4.34
471 473 7.174772 TGGGAATCCAATATGAATTATGACGTG 59.825 37.037 0.09 0.00 40.73 4.49
472 474 7.362056 GGGAATCCAATATGAATTATGACGTGG 60.362 40.741 0.09 0.00 0.00 4.94
473 475 7.390440 GGAATCCAATATGAATTATGACGTGGA 59.610 37.037 0.00 0.00 37.07 4.02
474 476 8.868522 AATCCAATATGAATTATGACGTGGAT 57.131 30.769 0.00 0.00 43.49 3.41
475 477 7.905604 TCCAATATGAATTATGACGTGGATC 57.094 36.000 0.00 0.00 0.00 3.36
476 478 7.449247 TCCAATATGAATTATGACGTGGATCA 58.551 34.615 0.00 0.00 0.00 2.92
477 479 7.387673 TCCAATATGAATTATGACGTGGATCAC 59.612 37.037 0.00 0.00 0.00 3.06
478 480 7.173047 CCAATATGAATTATGACGTGGATCACA 59.827 37.037 0.00 0.00 33.40 3.58
479 481 8.724229 CAATATGAATTATGACGTGGATCACAT 58.276 33.333 0.00 0.00 33.40 3.21
480 482 6.791887 ATGAATTATGACGTGGATCACATC 57.208 37.500 0.00 0.00 33.40 3.06
481 483 4.744631 TGAATTATGACGTGGATCACATCG 59.255 41.667 0.00 0.00 28.48 3.84
482 484 4.584327 ATTATGACGTGGATCACATCGA 57.416 40.909 0.00 0.00 28.48 3.59
483 485 4.584327 TTATGACGTGGATCACATCGAT 57.416 40.909 0.00 0.00 36.91 3.59
484 486 2.959507 TGACGTGGATCACATCGATT 57.040 45.000 0.00 0.00 33.17 3.34
485 487 3.245518 TGACGTGGATCACATCGATTT 57.754 42.857 0.00 0.00 33.17 2.17
486 488 3.186909 TGACGTGGATCACATCGATTTC 58.813 45.455 0.00 0.00 33.17 2.17
487 489 3.119137 TGACGTGGATCACATCGATTTCT 60.119 43.478 0.00 0.00 33.17 2.52
488 490 3.861840 ACGTGGATCACATCGATTTCTT 58.138 40.909 0.00 0.00 33.17 2.52
489 491 4.253685 ACGTGGATCACATCGATTTCTTT 58.746 39.130 0.00 0.00 33.17 2.52
490 492 4.695455 ACGTGGATCACATCGATTTCTTTT 59.305 37.500 0.00 0.00 33.17 2.27
491 493 5.181245 ACGTGGATCACATCGATTTCTTTTT 59.819 36.000 0.00 0.00 33.17 1.94
492 494 5.509272 CGTGGATCACATCGATTTCTTTTTG 59.491 40.000 0.00 0.00 33.17 2.44
493 495 6.611381 GTGGATCACATCGATTTCTTTTTGA 58.389 36.000 0.00 0.00 33.17 2.69
494 496 7.083858 GTGGATCACATCGATTTCTTTTTGAA 58.916 34.615 0.00 0.00 33.17 2.69
495 497 7.756722 GTGGATCACATCGATTTCTTTTTGAAT 59.243 33.333 0.00 0.00 33.17 2.57
496 498 8.306038 TGGATCACATCGATTTCTTTTTGAATT 58.694 29.630 0.00 0.00 33.17 2.17
497 499 9.143631 GGATCACATCGATTTCTTTTTGAATTT 57.856 29.630 0.00 0.00 33.17 1.82
499 501 9.918630 ATCACATCGATTTCTTTTTGAATTTCT 57.081 25.926 0.00 0.00 34.24 2.52
518 520 9.916397 GAATTTCTATGTGTGTAATTACTTCGG 57.084 33.333 16.33 1.82 0.00 4.30
519 521 9.661563 AATTTCTATGTGTGTAATTACTTCGGA 57.338 29.630 16.33 3.85 0.00 4.55
520 522 9.661563 ATTTCTATGTGTGTAATTACTTCGGAA 57.338 29.630 16.33 8.72 0.00 4.30
521 523 8.470040 TTCTATGTGTGTAATTACTTCGGAAC 57.530 34.615 16.33 5.95 0.00 3.62
522 524 7.833786 TCTATGTGTGTAATTACTTCGGAACT 58.166 34.615 16.33 0.00 0.00 3.01
523 525 8.308931 TCTATGTGTGTAATTACTTCGGAACTT 58.691 33.333 16.33 6.78 0.00 2.66
524 526 6.533819 TGTGTGTAATTACTTCGGAACTTG 57.466 37.500 16.33 0.00 0.00 3.16
525 527 6.282167 TGTGTGTAATTACTTCGGAACTTGA 58.718 36.000 16.33 0.00 0.00 3.02
526 528 6.762187 TGTGTGTAATTACTTCGGAACTTGAA 59.238 34.615 16.33 0.00 0.00 2.69
527 529 7.442969 TGTGTGTAATTACTTCGGAACTTGAAT 59.557 33.333 16.33 0.00 0.00 2.57
528 530 7.955864 GTGTGTAATTACTTCGGAACTTGAATC 59.044 37.037 16.33 0.00 0.00 2.52
529 531 7.876068 TGTGTAATTACTTCGGAACTTGAATCT 59.124 33.333 16.33 0.00 0.00 2.40
530 532 8.169268 GTGTAATTACTTCGGAACTTGAATCTG 58.831 37.037 16.33 0.00 0.00 2.90
531 533 8.092068 TGTAATTACTTCGGAACTTGAATCTGA 58.908 33.333 16.33 0.00 0.00 3.27
532 534 7.602517 AATTACTTCGGAACTTGAATCTGAG 57.397 36.000 0.00 0.00 33.90 3.35
533 535 4.608948 ACTTCGGAACTTGAATCTGAGT 57.391 40.909 0.00 0.00 33.90 3.41
534 536 4.561105 ACTTCGGAACTTGAATCTGAGTC 58.439 43.478 0.00 0.00 33.90 3.36
535 537 4.282195 ACTTCGGAACTTGAATCTGAGTCT 59.718 41.667 6.67 0.00 33.90 3.24
536 538 5.477291 ACTTCGGAACTTGAATCTGAGTCTA 59.523 40.000 6.67 0.00 33.90 2.59
537 539 6.153680 ACTTCGGAACTTGAATCTGAGTCTAT 59.846 38.462 6.67 0.00 33.90 1.98
538 540 6.531503 TCGGAACTTGAATCTGAGTCTATT 57.468 37.500 6.67 0.00 0.00 1.73
539 541 6.936279 TCGGAACTTGAATCTGAGTCTATTT 58.064 36.000 6.67 0.00 0.00 1.40
540 542 7.386851 TCGGAACTTGAATCTGAGTCTATTTT 58.613 34.615 6.67 0.00 0.00 1.82
541 543 7.878127 TCGGAACTTGAATCTGAGTCTATTTTT 59.122 33.333 6.67 0.00 0.00 1.94
542 544 8.171840 CGGAACTTGAATCTGAGTCTATTTTTC 58.828 37.037 6.67 2.93 0.00 2.29
543 545 9.225436 GGAACTTGAATCTGAGTCTATTTTTCT 57.775 33.333 6.67 0.00 0.00 2.52
580 582 5.535333 ACTTCGGAATTTGTTCTTCGTAGA 58.465 37.500 0.00 0.00 0.00 2.59
581 583 6.164176 ACTTCGGAATTTGTTCTTCGTAGAT 58.836 36.000 0.00 0.00 35.04 1.98
586 588 6.510157 CGGAATTTGTTCTTCGTAGATGATGG 60.510 42.308 0.00 0.00 40.40 3.51
598 600 3.634218 AGATGATGGGATGTCTCCTCT 57.366 47.619 0.00 0.00 41.74 3.69
600 602 5.085275 AGATGATGGGATGTCTCCTCTTA 57.915 43.478 0.00 0.00 41.74 2.10
601 603 4.837860 AGATGATGGGATGTCTCCTCTTAC 59.162 45.833 0.00 0.00 41.74 2.34
603 605 3.963374 TGATGGGATGTCTCCTCTTACTG 59.037 47.826 0.00 0.00 41.74 2.74
604 606 3.757947 TGGGATGTCTCCTCTTACTGA 57.242 47.619 0.00 0.00 41.74 3.41
606 608 3.769844 TGGGATGTCTCCTCTTACTGAAC 59.230 47.826 0.00 0.00 41.74 3.18
607 609 3.181485 GGGATGTCTCCTCTTACTGAACG 60.181 52.174 0.00 0.00 41.74 3.95
608 610 3.440228 GATGTCTCCTCTTACTGAACGC 58.560 50.000 0.00 0.00 0.00 4.84
609 611 2.235891 TGTCTCCTCTTACTGAACGCA 58.764 47.619 0.00 0.00 0.00 5.24
610 612 2.030185 TGTCTCCTCTTACTGAACGCAC 60.030 50.000 0.00 0.00 0.00 5.34
612 614 2.826128 TCTCCTCTTACTGAACGCACAT 59.174 45.455 0.00 0.00 0.00 3.21
613 615 3.119459 TCTCCTCTTACTGAACGCACATC 60.119 47.826 0.00 0.00 0.00 3.06
614 616 1.920574 CCTCTTACTGAACGCACATCG 59.079 52.381 0.00 0.00 45.38 3.84
645 719 7.615582 AAATCTGAAACAGAATAATGCGAGA 57.384 32.000 5.57 0.00 44.04 4.04
647 721 7.798596 ATCTGAAACAGAATAATGCGAGAAT 57.201 32.000 5.57 0.00 44.04 2.40
648 722 7.615582 TCTGAAACAGAATAATGCGAGAATT 57.384 32.000 0.00 0.00 37.57 2.17
651 725 8.716646 TGAAACAGAATAATGCGAGAATTAGA 57.283 30.769 0.00 0.00 0.00 2.10
652 726 9.330063 TGAAACAGAATAATGCGAGAATTAGAT 57.670 29.630 0.00 0.00 0.00 1.98
663 737 4.026475 GCGAGAATTAGATCCAACTTCACG 60.026 45.833 9.52 9.52 34.51 4.35
668 742 6.814146 AGAATTAGATCCAACTTCACGACTTC 59.186 38.462 0.00 0.00 0.00 3.01
716 790 5.872617 TGTGGTTGTGTACTGCTGTTATATC 59.127 40.000 0.09 0.00 0.00 1.63
828 1816 2.571653 TCCCAACTGATGAATCCGAACT 59.428 45.455 0.00 0.00 0.00 3.01
831 1819 2.679837 CAACTGATGAATCCGAACTGGG 59.320 50.000 0.00 0.00 38.76 4.45
911 1899 3.085533 TCCTCTTCTTCTCTTCACCGAG 58.914 50.000 0.00 0.00 0.00 4.63
984 1974 3.019545 GCTCGATCGGAAGCGACG 61.020 66.667 16.41 0.00 32.51 5.12
1228 2218 1.811645 CGGCCGGATTTGGTGGTTTT 61.812 55.000 20.10 0.00 0.00 2.43
1241 2231 1.068541 GTGGTTTTCGTTGATCCTGCC 60.069 52.381 0.00 0.00 0.00 4.85
1243 2233 1.886542 GGTTTTCGTTGATCCTGCCTT 59.113 47.619 0.00 0.00 0.00 4.35
1282 2272 1.296715 GTGCCTGATCCAGTTCCGT 59.703 57.895 0.00 0.00 0.00 4.69
1474 2464 3.557595 GTGCGGTTTCCAATCTGAGATAG 59.442 47.826 0.00 0.00 0.00 2.08
1483 2473 2.883386 CAATCTGAGATAGGCAAAGGGC 59.117 50.000 0.00 0.00 43.74 5.19
1509 2499 7.665561 TGTTTCATATGTGACAGATTTCGAA 57.334 32.000 1.90 0.00 33.11 3.71
1512 2502 6.291067 TCATATGTGACAGATTTCGAATGC 57.709 37.500 0.00 0.00 0.00 3.56
1519 2509 1.009829 AGATTTCGAATGCTGACGGC 58.990 50.000 0.00 0.00 42.22 5.68
1546 2536 1.271543 TGATTCTGGCAGAGTTGGTGG 60.272 52.381 17.91 0.00 0.00 4.61
1587 2577 0.035439 TGCTTGGGGAACTCGAATCC 60.035 55.000 8.14 8.14 36.16 3.01
1649 2639 7.551974 TCACTTCTCCGGTATGTATATAGCTAC 59.448 40.741 0.00 0.00 35.60 3.58
1774 2764 7.886629 ATATCTCAAACATAACATTGCCTGT 57.113 32.000 0.00 0.00 40.84 4.00
2157 3212 3.801293 GCAGCTGCAAATTTTCTGAACCT 60.801 43.478 33.36 0.00 41.59 3.50
2341 3397 0.604578 CTTGGTCCCATGTTTGCCAG 59.395 55.000 0.00 0.00 0.00 4.85
2372 3428 6.055231 TGTTTTGGTAGTCTTTTCATCACG 57.945 37.500 0.00 0.00 0.00 4.35
2567 3623 3.615224 AAGCATGCAACATTTAAGGGG 57.385 42.857 21.98 0.00 0.00 4.79
2629 3685 8.637986 ACTTTATGGTGAAATGCTACTTTGAAA 58.362 29.630 0.00 0.00 0.00 2.69
2631 3687 9.995003 TTTATGGTGAAATGCTACTTTGAAATT 57.005 25.926 0.00 0.00 0.00 1.82
2682 3738 3.057315 GCTGAATTCAACTGCCAAAGCTA 60.057 43.478 9.88 0.00 40.80 3.32
2749 3805 1.615392 GGACCAACTTGCTTGCTTGAT 59.385 47.619 0.00 0.00 0.00 2.57
2777 3833 6.820656 AGTTTTGTCCACTGAGCATCTATTAG 59.179 38.462 0.00 0.00 34.92 1.73
2794 3850 5.874810 TCTATTAGCAGTGTGTTCAATGGTC 59.125 40.000 3.83 0.00 44.98 4.02
2809 3865 4.571984 TCAATGGTCGCTGAATAGATGTTG 59.428 41.667 0.00 0.00 0.00 3.33
2845 3901 6.156949 TGGCTAGAACAATATTTCTCTCCAGT 59.843 38.462 0.00 0.00 37.09 4.00
2875 3931 7.630242 TCATCTGCAGGTTTCTTATTTAAGG 57.370 36.000 15.13 0.00 34.14 2.69
3007 4063 1.634973 TCTTGAATCATGGGCTGGTGA 59.365 47.619 0.00 0.00 0.00 4.02
3051 4107 7.602517 AGTAGCAGATATTTGTCTGTTTGTC 57.397 36.000 6.25 0.00 45.80 3.18
3072 4128 4.864247 GTCGGGCTATTTTTCGTTGTACTA 59.136 41.667 0.00 0.00 0.00 1.82
3232 4288 6.672266 TGGGGAATGATAGCTTTAGTAGAG 57.328 41.667 0.00 0.00 0.00 2.43
3281 4337 2.978156 TGAAAGGTGCCATTTCTCCT 57.022 45.000 11.67 0.00 37.51 3.69
3304 4360 7.665559 TCCTTAATTGTGCACAAATCTTAGAGT 59.334 33.333 34.06 13.22 39.55 3.24
3376 4434 7.254590 GGTTATGGACGAGAAATTTCTGAGATG 60.255 40.741 25.12 11.36 37.73 2.90
3418 4476 8.918202 AACTCAGTATGTATCTTTTTGTGGAA 57.082 30.769 0.00 0.00 37.40 3.53
3419 4477 9.520515 AACTCAGTATGTATCTTTTTGTGGAAT 57.479 29.630 0.00 0.00 37.40 3.01
3467 4525 3.252554 ACTGAGAGTATCCATCCCTCC 57.747 52.381 0.00 0.00 33.66 4.30
3552 4610 7.931407 GGGAAAAGGTATGTCAACTTTCATTTT 59.069 33.333 0.00 0.00 33.64 1.82
3809 4966 9.056005 TGCTGAACAAATATATTTTCGATAGCT 57.944 29.630 20.34 0.00 0.00 3.32
3899 5083 5.997129 TCTCAAATTTGTCTGCTGATGTGTA 59.003 36.000 17.47 0.00 0.00 2.90
3900 5084 6.656270 TCTCAAATTTGTCTGCTGATGTGTAT 59.344 34.615 17.47 0.00 0.00 2.29
3901 5085 7.175467 TCTCAAATTTGTCTGCTGATGTGTATT 59.825 33.333 17.47 0.00 0.00 1.89
3902 5086 7.660112 TCAAATTTGTCTGCTGATGTGTATTT 58.340 30.769 17.47 0.00 0.00 1.40
3903 5087 7.595875 TCAAATTTGTCTGCTGATGTGTATTTG 59.404 33.333 17.47 15.31 33.08 2.32
3904 5088 4.424061 TTGTCTGCTGATGTGTATTTGC 57.576 40.909 0.00 0.00 0.00 3.68
3907 5091 4.083164 TGTCTGCTGATGTGTATTTGCAAG 60.083 41.667 0.00 0.00 0.00 4.01
3910 5094 3.057386 TGCTGATGTGTATTTGCAAGTGG 60.057 43.478 4.47 0.00 0.00 4.00
3911 5095 3.191162 GCTGATGTGTATTTGCAAGTGGA 59.809 43.478 4.47 0.00 0.00 4.02
3912 5096 4.321156 GCTGATGTGTATTTGCAAGTGGAA 60.321 41.667 4.47 0.00 0.00 3.53
3913 5097 5.375417 TGATGTGTATTTGCAAGTGGAAG 57.625 39.130 4.47 0.00 0.00 3.46
3914 5098 4.218200 TGATGTGTATTTGCAAGTGGAAGG 59.782 41.667 4.47 0.00 0.00 3.46
3915 5099 3.826524 TGTGTATTTGCAAGTGGAAGGA 58.173 40.909 4.47 0.00 0.00 3.36
3916 5100 3.820467 TGTGTATTTGCAAGTGGAAGGAG 59.180 43.478 4.47 0.00 0.00 3.69
3917 5101 3.821033 GTGTATTTGCAAGTGGAAGGAGT 59.179 43.478 4.47 0.00 0.00 3.85
3919 5103 4.892934 TGTATTTGCAAGTGGAAGGAGTTT 59.107 37.500 4.47 0.00 0.00 2.66
3920 5104 6.016610 GTGTATTTGCAAGTGGAAGGAGTTTA 60.017 38.462 4.47 0.00 0.00 2.01
3921 5105 6.719370 TGTATTTGCAAGTGGAAGGAGTTTAT 59.281 34.615 4.47 0.00 0.00 1.40
3922 5106 6.670695 ATTTGCAAGTGGAAGGAGTTTATT 57.329 33.333 0.00 0.00 0.00 1.40
3923 5107 6.478512 TTTGCAAGTGGAAGGAGTTTATTT 57.521 33.333 0.00 0.00 0.00 1.40
4065 5275 7.810658 ACTATCAGCAAGACAATGTTTACAAG 58.189 34.615 0.00 0.00 0.00 3.16
4375 6246 7.585579 AGGAAACGGTTGGTTCTTTATTTTA 57.414 32.000 0.00 0.00 38.08 1.52
4652 6726 8.528044 TGTTTTACTTTGATTTAACCTGGAGT 57.472 30.769 0.00 0.00 0.00 3.85
4799 6873 1.529152 CTGCATCCAAGCCAAGTGCA 61.529 55.000 0.00 0.00 44.83 4.57
4829 6903 4.563786 CCTGTTGAAGAGAAGAAGGTACCC 60.564 50.000 8.74 0.00 0.00 3.69
4887 6961 2.874014 TGATCCAGATTTTGTGCACCA 58.126 42.857 15.69 0.00 0.00 4.17
4915 6989 9.043079 TGTCAATTTAAACACGACATTACACTA 57.957 29.630 10.54 0.00 31.92 2.74
4974 7048 5.122869 ACATGTGAGATGGACAAGATTTTCG 59.877 40.000 0.00 0.00 0.00 3.46
5038 7112 4.624913 TCCTCTTCCATGTGAATCCTACT 58.375 43.478 0.00 0.00 31.06 2.57
5111 7185 4.740902 AGGCCAGAGTTCATTTTACCTTT 58.259 39.130 5.01 0.00 0.00 3.11
5284 7390 6.609237 ATTTGATGTGAACTATGGATCACG 57.391 37.500 13.47 0.00 44.68 4.35
5285 7391 4.058721 TGATGTGAACTATGGATCACGG 57.941 45.455 13.47 0.00 44.68 4.94
5378 7485 2.044630 AGGGACCTAAGTTAGAGTGGCT 59.955 50.000 11.66 0.00 0.00 4.75
5538 7755 4.022849 GTGAAAATAGGCTCAGCACAGTTT 60.023 41.667 0.00 0.00 0.00 2.66
5625 7842 3.865745 GGGTCATATTTGTCTCGAGTGTG 59.134 47.826 13.13 1.27 0.00 3.82
5953 8172 3.665190 AGTAAAGAGGGCTTTTCAGACG 58.335 45.455 0.00 0.00 41.43 4.18
6007 8226 1.471676 CCCGACGAGGAGAAATTCAGG 60.472 57.143 0.00 0.00 45.00 3.86
6042 8261 2.947652 CCAATGCTACATTCCAGGTGAG 59.052 50.000 0.00 0.00 0.00 3.51
6048 8267 0.698818 ACATTCCAGGTGAGTTCCCC 59.301 55.000 0.00 0.00 0.00 4.81
6074 8294 1.193874 CTGGACTGGTAAAAACGACGC 59.806 52.381 0.00 0.00 0.00 5.19
6160 8380 3.808984 CCTTGGGGGCATAGAGTTC 57.191 57.895 0.00 0.00 0.00 3.01
6165 8385 1.049289 GGGGGCATAGAGTTCCTCGT 61.049 60.000 0.00 0.00 35.36 4.18
6300 8520 3.870559 ACCCTTTCTTTGGAGTCCTCTA 58.129 45.455 11.33 0.00 0.00 2.43
6310 8530 1.964933 GGAGTCCTCTAAATCGGGGAG 59.035 57.143 0.41 0.00 0.00 4.30
6341 8561 2.781681 TTCCCTCCTGAAAATCCGTC 57.218 50.000 0.00 0.00 0.00 4.79
6417 8638 8.219769 GTGTGATCTTGCTTATGAGAAATATCG 58.780 37.037 0.00 0.00 30.28 2.92
6445 8670 3.319689 CACGGGGAAATTTTTACACAGGT 59.680 43.478 0.00 0.00 0.00 4.00
6541 9072 4.738124 GCAAAATAGAAGTCCTTTGCCTC 58.262 43.478 7.04 0.00 44.98 4.70
6553 9084 4.943705 GTCCTTTGCCTCATGTAAAGATCA 59.056 41.667 12.59 0.00 46.15 2.92
6554 9085 5.415701 GTCCTTTGCCTCATGTAAAGATCAA 59.584 40.000 12.59 1.94 46.15 2.57
6584 9115 2.557452 GGGGTCATTGAATCCAACAGGT 60.557 50.000 8.86 0.00 34.72 4.00
6585 9116 2.493278 GGGTCATTGAATCCAACAGGTG 59.507 50.000 0.00 0.00 34.72 4.00
6588 9125 4.142315 GGTCATTGAATCCAACAGGTGATG 60.142 45.833 0.00 0.00 34.72 3.07
6626 9163 7.814356 AGTAGCCTACTTATACAGTACTCCTT 58.186 38.462 0.00 0.00 36.88 3.36
6627 9164 7.938490 AGTAGCCTACTTATACAGTACTCCTTC 59.062 40.741 0.00 0.00 36.88 3.46
6628 9165 6.069994 AGCCTACTTATACAGTACTCCTTCC 58.930 44.000 0.00 0.00 36.88 3.46
6629 9166 5.048852 GCCTACTTATACAGTACTCCTTCCG 60.049 48.000 0.00 0.00 36.88 4.30
6630 9167 6.060788 CCTACTTATACAGTACTCCTTCCGT 58.939 44.000 0.00 0.00 36.88 4.69
6632 9169 4.886489 ACTTATACAGTACTCCTTCCGTCC 59.114 45.833 0.00 0.00 31.97 4.79
6633 9170 1.742761 TACAGTACTCCTTCCGTCCG 58.257 55.000 0.00 0.00 0.00 4.79
6634 9171 0.037303 ACAGTACTCCTTCCGTCCGA 59.963 55.000 0.00 0.00 0.00 4.55
6635 9172 1.171308 CAGTACTCCTTCCGTCCGAA 58.829 55.000 0.00 0.00 0.00 4.30
6636 9173 1.542915 CAGTACTCCTTCCGTCCGAAA 59.457 52.381 0.00 0.00 0.00 3.46
6638 9175 2.830321 AGTACTCCTTCCGTCCGAAAAT 59.170 45.455 0.00 0.00 0.00 1.82
6639 9176 4.019174 AGTACTCCTTCCGTCCGAAAATA 58.981 43.478 0.00 0.00 0.00 1.40
6640 9177 3.242549 ACTCCTTCCGTCCGAAAATAC 57.757 47.619 0.00 0.00 0.00 1.89
6642 9179 3.260128 ACTCCTTCCGTCCGAAAATACTT 59.740 43.478 0.00 0.00 0.00 2.24
6643 9180 3.592059 TCCTTCCGTCCGAAAATACTTG 58.408 45.455 0.00 0.00 0.00 3.16
6644 9181 3.007182 TCCTTCCGTCCGAAAATACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
6646 9183 3.663995 TCCGTCCGAAAATACTTGTCA 57.336 42.857 0.00 0.00 0.00 3.58
6648 9185 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
6650 9187 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
6651 9188 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
6652 9189 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
6653 9190 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
6655 9192 9.490663 GTCCGAAAATACTTGTCATCAAAATAG 57.509 33.333 0.00 0.00 32.87 1.73
6656 9193 9.443323 TCCGAAAATACTTGTCATCAAAATAGA 57.557 29.630 0.00 0.00 32.87 1.98
6665 9202 8.971073 ACTTGTCATCAAAATAGATAAAAGGGG 58.029 33.333 0.00 0.00 32.87 4.79
6666 9203 9.189156 CTTGTCATCAAAATAGATAAAAGGGGA 57.811 33.333 0.00 0.00 32.87 4.81
6667 9204 9.713684 TTGTCATCAAAATAGATAAAAGGGGAT 57.286 29.630 0.00 0.00 0.00 3.85
6668 9205 9.135189 TGTCATCAAAATAGATAAAAGGGGATG 57.865 33.333 0.00 0.00 0.00 3.51
6669 9206 9.136323 GTCATCAAAATAGATAAAAGGGGATGT 57.864 33.333 0.00 0.00 32.47 3.06
6679 9216 8.980832 AGATAAAAGGGGATGTATCTAGATGT 57.019 34.615 15.79 1.25 32.73 3.06
6687 9224 9.845214 AGGGGATGTATCTAGATGTATTTTACT 57.155 33.333 15.79 2.47 0.00 2.24
6725 9262 9.918630 CTCTTTTTATCCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
6733 9270 9.865321 ATCCATTTTGATGACAAGTATTTTCAG 57.135 29.630 0.00 0.00 37.32 3.02
6734 9271 9.076781 TCCATTTTGATGACAAGTATTTTCAGA 57.923 29.630 0.00 0.00 37.32 3.27
6735 9272 9.865321 CCATTTTGATGACAAGTATTTTCAGAT 57.135 29.630 0.00 0.00 37.32 2.90
6737 9274 9.865321 ATTTTGATGACAAGTATTTTCAGATGG 57.135 29.630 0.00 0.00 37.32 3.51
6738 9275 8.634335 TTTGATGACAAGTATTTTCAGATGGA 57.366 30.769 0.00 0.00 37.32 3.41
6739 9276 8.812513 TTGATGACAAGTATTTTCAGATGGAT 57.187 30.769 0.00 0.00 0.00 3.41
6740 9277 8.217131 TGATGACAAGTATTTTCAGATGGATG 57.783 34.615 0.00 0.00 0.00 3.51
6741 9278 7.283807 TGATGACAAGTATTTTCAGATGGATGG 59.716 37.037 0.00 0.00 0.00 3.51
6742 9279 6.720309 TGACAAGTATTTTCAGATGGATGGA 58.280 36.000 0.00 0.00 0.00 3.41
6743 9280 6.825213 TGACAAGTATTTTCAGATGGATGGAG 59.175 38.462 0.00 0.00 0.00 3.86
6744 9281 6.725364 ACAAGTATTTTCAGATGGATGGAGT 58.275 36.000 0.00 0.00 0.00 3.85
6745 9282 7.861629 ACAAGTATTTTCAGATGGATGGAGTA 58.138 34.615 0.00 0.00 0.00 2.59
6775 9312 4.061570 GAAACAAATTTCTGCTGCATGC 57.938 40.909 11.82 11.82 41.01 4.06
6776 9313 1.705256 ACAAATTTCTGCTGCATGCG 58.295 45.000 14.09 9.16 46.63 4.73
6779 9316 0.734942 AATTTCTGCTGCATGCGCAC 60.735 50.000 25.90 13.76 45.36 5.34
6780 9317 1.868987 ATTTCTGCTGCATGCGCACA 61.869 50.000 25.90 17.27 45.36 4.57
6781 9318 2.736343 TTTCTGCTGCATGCGCACAC 62.736 55.000 25.90 8.71 45.36 3.82
6784 9321 4.388080 GCTGCATGCGCACACGAA 62.388 61.111 14.90 0.00 45.36 3.85
6785 9322 2.202260 CTGCATGCGCACACGAAG 60.202 61.111 14.90 4.24 45.36 3.79
6786 9323 3.656243 CTGCATGCGCACACGAAGG 62.656 63.158 14.90 0.00 45.36 3.46
6787 9324 3.726517 GCATGCGCACACGAAGGT 61.727 61.111 14.90 0.00 43.93 3.50
6788 9325 2.387445 GCATGCGCACACGAAGGTA 61.387 57.895 14.90 0.00 43.93 3.08
6789 9326 1.705337 GCATGCGCACACGAAGGTAT 61.705 55.000 14.90 0.00 43.93 2.73
6790 9327 1.566404 CATGCGCACACGAAGGTATA 58.434 50.000 14.90 0.00 43.93 1.47
6791 9328 2.135139 CATGCGCACACGAAGGTATAT 58.865 47.619 14.90 0.00 43.93 0.86
6792 9329 1.847818 TGCGCACACGAAGGTATATC 58.152 50.000 5.66 0.00 43.93 1.63
6793 9330 1.137513 GCGCACACGAAGGTATATCC 58.862 55.000 0.30 0.00 43.93 2.59
6794 9331 1.537348 GCGCACACGAAGGTATATCCA 60.537 52.381 0.30 0.00 43.93 3.41
6795 9332 2.124903 CGCACACGAAGGTATATCCAC 58.875 52.381 0.00 0.00 43.93 4.02
6796 9333 2.480587 CGCACACGAAGGTATATCCACA 60.481 50.000 0.00 0.00 43.93 4.17
6797 9334 2.864343 GCACACGAAGGTATATCCACAC 59.136 50.000 0.00 0.00 39.02 3.82
6798 9335 3.677700 GCACACGAAGGTATATCCACACA 60.678 47.826 0.00 0.00 39.02 3.72
6799 9336 4.693283 CACACGAAGGTATATCCACACAT 58.307 43.478 0.00 0.00 39.02 3.21
6800 9337 4.507756 CACACGAAGGTATATCCACACATG 59.492 45.833 0.00 0.00 39.02 3.21
6801 9338 4.161565 ACACGAAGGTATATCCACACATGT 59.838 41.667 0.00 0.00 39.02 3.21
6802 9339 5.361571 ACACGAAGGTATATCCACACATGTA 59.638 40.000 0.00 0.00 39.02 2.29
6803 9340 5.920840 CACGAAGGTATATCCACACATGTAG 59.079 44.000 0.00 0.00 39.02 2.74
6804 9341 4.923871 CGAAGGTATATCCACACATGTAGC 59.076 45.833 0.00 0.00 39.02 3.58
6805 9342 5.508994 CGAAGGTATATCCACACATGTAGCA 60.509 44.000 0.00 0.00 39.02 3.49
6823 9360 0.870393 CACATGTGCGAAGTGCTCTT 59.130 50.000 13.94 0.00 46.63 2.85
6824 9361 1.265095 CACATGTGCGAAGTGCTCTTT 59.735 47.619 13.94 0.00 46.63 2.52
6833 9370 3.246619 CGAAGTGCTCTTTACCTGAGTC 58.753 50.000 2.00 0.00 33.64 3.36
6834 9371 3.246619 GAAGTGCTCTTTACCTGAGTCG 58.753 50.000 2.00 0.00 33.64 4.18
6835 9372 1.546476 AGTGCTCTTTACCTGAGTCGG 59.454 52.381 0.00 0.00 34.30 4.79
6836 9373 0.246635 TGCTCTTTACCTGAGTCGGC 59.753 55.000 0.00 0.00 34.30 5.54
6838 9375 0.802607 CTCTTTACCTGAGTCGGCGC 60.803 60.000 0.00 0.00 0.00 6.53
6839 9376 1.810030 CTTTACCTGAGTCGGCGCC 60.810 63.158 19.07 19.07 0.00 6.53
6840 9377 3.305177 TTTACCTGAGTCGGCGCCC 62.305 63.158 23.46 7.92 0.00 6.13
6853 9390 3.721706 CGCCCCCTCCTCTGCTTT 61.722 66.667 0.00 0.00 0.00 3.51
6854 9391 2.766660 GCCCCCTCCTCTGCTTTT 59.233 61.111 0.00 0.00 0.00 2.27
6855 9392 1.077445 GCCCCCTCCTCTGCTTTTT 59.923 57.895 0.00 0.00 0.00 1.94
6878 9415 2.531852 AGGACCCTCCTCCGTTGT 59.468 61.111 0.00 0.00 45.66 3.32
6879 9416 1.913762 AGGACCCTCCTCCGTTGTG 60.914 63.158 0.00 0.00 45.66 3.33
6880 9417 1.911766 GGACCCTCCTCCGTTGTGA 60.912 63.158 0.00 0.00 32.53 3.58
6881 9418 1.477685 GGACCCTCCTCCGTTGTGAA 61.478 60.000 0.00 0.00 32.53 3.18
6882 9419 0.613777 GACCCTCCTCCGTTGTGAAT 59.386 55.000 0.00 0.00 0.00 2.57
6883 9420 1.829222 GACCCTCCTCCGTTGTGAATA 59.171 52.381 0.00 0.00 0.00 1.75
6884 9421 2.235402 GACCCTCCTCCGTTGTGAATAA 59.765 50.000 0.00 0.00 0.00 1.40
6885 9422 2.236395 ACCCTCCTCCGTTGTGAATAAG 59.764 50.000 0.00 0.00 0.00 1.73
6886 9423 2.236395 CCCTCCTCCGTTGTGAATAAGT 59.764 50.000 0.00 0.00 0.00 2.24
6887 9424 3.307480 CCCTCCTCCGTTGTGAATAAGTT 60.307 47.826 0.00 0.00 0.00 2.66
6889 9426 4.315803 CTCCTCCGTTGTGAATAAGTTGT 58.684 43.478 0.00 0.00 0.00 3.32
6890 9427 4.062293 TCCTCCGTTGTGAATAAGTTGTG 58.938 43.478 0.00 0.00 0.00 3.33
6891 9428 4.062293 CCTCCGTTGTGAATAAGTTGTGA 58.938 43.478 0.00 0.00 0.00 3.58
6892 9429 4.513692 CCTCCGTTGTGAATAAGTTGTGAA 59.486 41.667 0.00 0.00 0.00 3.18
6893 9430 5.412526 TCCGTTGTGAATAAGTTGTGAAC 57.587 39.130 0.00 0.00 0.00 3.18
6894 9431 4.273969 TCCGTTGTGAATAAGTTGTGAACC 59.726 41.667 0.00 0.00 0.00 3.62
6895 9432 4.533222 CGTTGTGAATAAGTTGTGAACCC 58.467 43.478 0.00 0.00 0.00 4.11
6897 9434 5.560183 CGTTGTGAATAAGTTGTGAACCCTC 60.560 44.000 0.00 0.00 0.00 4.30
6898 9435 5.304686 TGTGAATAAGTTGTGAACCCTCT 57.695 39.130 0.00 0.00 0.00 3.69
6899 9436 6.428083 TGTGAATAAGTTGTGAACCCTCTA 57.572 37.500 0.00 0.00 0.00 2.43
6900 9437 6.228258 TGTGAATAAGTTGTGAACCCTCTAC 58.772 40.000 0.00 0.00 0.00 2.59
6901 9438 6.042781 TGTGAATAAGTTGTGAACCCTCTACT 59.957 38.462 0.00 0.00 0.00 2.57
6902 9439 6.369065 GTGAATAAGTTGTGAACCCTCTACTG 59.631 42.308 0.00 0.00 0.00 2.74
6903 9440 3.771577 AAGTTGTGAACCCTCTACTGG 57.228 47.619 0.00 0.00 0.00 4.00
6904 9441 2.972348 AGTTGTGAACCCTCTACTGGA 58.028 47.619 0.00 0.00 0.00 3.86
6906 9443 3.261897 AGTTGTGAACCCTCTACTGGATG 59.738 47.826 0.00 0.00 0.00 3.51
6907 9444 2.187958 TGTGAACCCTCTACTGGATGG 58.812 52.381 0.00 0.00 36.08 3.51
6908 9445 2.225522 TGTGAACCCTCTACTGGATGGA 60.226 50.000 0.00 0.00 34.44 3.41
6909 9446 2.432510 GTGAACCCTCTACTGGATGGAG 59.567 54.545 0.00 0.00 35.69 3.86
6916 9453 3.917300 CTCTACTGGATGGAGGTTAGGT 58.083 50.000 0.00 0.00 32.30 3.08
6917 9454 4.290942 CTCTACTGGATGGAGGTTAGGTT 58.709 47.826 0.00 0.00 32.30 3.50
6918 9455 4.287552 TCTACTGGATGGAGGTTAGGTTC 58.712 47.826 0.00 0.00 0.00 3.62
6919 9456 3.207044 ACTGGATGGAGGTTAGGTTCT 57.793 47.619 0.00 0.00 0.00 3.01
6920 9457 3.532102 ACTGGATGGAGGTTAGGTTCTT 58.468 45.455 0.00 0.00 0.00 2.52
6921 9458 3.916989 ACTGGATGGAGGTTAGGTTCTTT 59.083 43.478 0.00 0.00 0.00 2.52
6923 9460 3.010138 TGGATGGAGGTTAGGTTCTTTGG 59.990 47.826 0.00 0.00 0.00 3.28
6924 9461 2.579410 TGGAGGTTAGGTTCTTTGGC 57.421 50.000 0.00 0.00 0.00 4.52
6925 9462 2.062636 TGGAGGTTAGGTTCTTTGGCT 58.937 47.619 0.00 0.00 0.00 4.75
6926 9463 2.445525 TGGAGGTTAGGTTCTTTGGCTT 59.554 45.455 0.00 0.00 0.00 4.35
6927 9464 3.117284 TGGAGGTTAGGTTCTTTGGCTTT 60.117 43.478 0.00 0.00 0.00 3.51
6928 9465 3.255888 GGAGGTTAGGTTCTTTGGCTTTG 59.744 47.826 0.00 0.00 0.00 2.77
6929 9466 3.230976 AGGTTAGGTTCTTTGGCTTTGG 58.769 45.455 0.00 0.00 0.00 3.28
6930 9467 2.288825 GGTTAGGTTCTTTGGCTTTGGC 60.289 50.000 0.00 0.00 37.82 4.52
6944 9481 6.616774 TGGCTTTGGCAAATTTCTAAAAAG 57.383 33.333 13.89 0.00 40.87 2.27
6945 9482 6.118852 TGGCTTTGGCAAATTTCTAAAAAGT 58.881 32.000 13.89 0.00 40.87 2.66
6946 9483 6.601217 TGGCTTTGGCAAATTTCTAAAAAGTT 59.399 30.769 13.89 0.00 40.87 2.66
6948 9485 7.415095 GGCTTTGGCAAATTTCTAAAAAGTTGT 60.415 33.333 13.89 0.00 46.74 3.32
6949 9486 7.967854 GCTTTGGCAAATTTCTAAAAAGTTGTT 59.032 29.630 13.89 0.00 46.74 2.83
6953 9490 9.660180 TGGCAAATTTCTAAAAAGTTGTTAACT 57.340 25.926 7.22 0.00 46.74 2.24
7024 9561 3.782889 AAAACAAGTCGCAAAGCTTCT 57.217 38.095 0.00 0.00 0.00 2.85
7027 9564 1.599542 ACAAGTCGCAAAGCTTCTGTC 59.400 47.619 0.00 0.00 0.00 3.51
7038 9575 4.696479 AAGCTTCTGTCTTCTTCCAAGA 57.304 40.909 0.00 0.00 0.00 3.02
7039 9576 4.696479 AGCTTCTGTCTTCTTCCAAGAA 57.304 40.909 1.85 1.85 42.41 2.52
7040 9577 5.041191 AGCTTCTGTCTTCTTCCAAGAAA 57.959 39.130 3.42 0.00 43.84 2.52
7041 9578 5.440610 AGCTTCTGTCTTCTTCCAAGAAAA 58.559 37.500 3.42 0.00 43.84 2.29
7042 9579 5.888161 AGCTTCTGTCTTCTTCCAAGAAAAA 59.112 36.000 3.42 0.00 43.84 1.94
7094 9631 2.417097 GCTTTGCAAACAGGCCGT 59.583 55.556 8.05 0.00 0.00 5.68
7118 9658 0.824182 ACGGCCCAAAACGATTTCCA 60.824 50.000 0.00 0.00 0.00 3.53
7119 9659 0.388006 CGGCCCAAAACGATTTCCAC 60.388 55.000 0.00 0.00 0.00 4.02
7120 9660 0.388006 GGCCCAAAACGATTTCCACG 60.388 55.000 0.00 0.00 0.00 4.94
7121 9661 0.388006 GCCCAAAACGATTTCCACGG 60.388 55.000 0.00 0.00 34.93 4.94
7122 9662 0.388006 CCCAAAACGATTTCCACGGC 60.388 55.000 0.00 0.00 34.93 5.68
7177 9746 3.431766 GGATTACCGGAAGTGTAGCATGT 60.432 47.826 9.46 0.00 0.00 3.21
7180 9749 3.454371 ACCGGAAGTGTAGCATGTATC 57.546 47.619 9.46 0.00 0.00 2.24
7181 9750 2.102588 ACCGGAAGTGTAGCATGTATCC 59.897 50.000 9.46 0.00 0.00 2.59
7182 9751 2.548067 CCGGAAGTGTAGCATGTATCCC 60.548 54.545 0.00 0.00 0.00 3.85
7183 9752 2.365617 CGGAAGTGTAGCATGTATCCCT 59.634 50.000 0.00 0.00 0.00 4.20
7184 9753 3.553096 CGGAAGTGTAGCATGTATCCCTC 60.553 52.174 0.00 0.00 0.00 4.30
7185 9754 3.388024 GGAAGTGTAGCATGTATCCCTCA 59.612 47.826 0.00 0.00 0.00 3.86
7186 9755 4.141711 GGAAGTGTAGCATGTATCCCTCAA 60.142 45.833 0.00 0.00 0.00 3.02
7187 9756 5.428253 GAAGTGTAGCATGTATCCCTCAAA 58.572 41.667 0.00 0.00 0.00 2.69
7188 9757 5.435686 AGTGTAGCATGTATCCCTCAAAA 57.564 39.130 0.00 0.00 0.00 2.44
7189 9758 5.431765 AGTGTAGCATGTATCCCTCAAAAG 58.568 41.667 0.00 0.00 0.00 2.27
7190 9759 5.045578 AGTGTAGCATGTATCCCTCAAAAGT 60.046 40.000 0.00 0.00 0.00 2.66
7191 9760 6.156256 AGTGTAGCATGTATCCCTCAAAAGTA 59.844 38.462 0.00 0.00 0.00 2.24
7192 9761 6.821665 GTGTAGCATGTATCCCTCAAAAGTAA 59.178 38.462 0.00 0.00 0.00 2.24
7193 9762 7.335924 GTGTAGCATGTATCCCTCAAAAGTAAA 59.664 37.037 0.00 0.00 0.00 2.01
7194 9763 7.885922 TGTAGCATGTATCCCTCAAAAGTAAAA 59.114 33.333 0.00 0.00 0.00 1.52
7195 9764 7.775053 AGCATGTATCCCTCAAAAGTAAAAA 57.225 32.000 0.00 0.00 0.00 1.94
7224 9793 7.672983 AAAAATGAAGCTACTTCTCGAATCA 57.327 32.000 8.66 0.00 40.73 2.57
7225 9794 7.672983 AAAATGAAGCTACTTCTCGAATCAA 57.327 32.000 8.66 0.00 40.73 2.57
7226 9795 7.672983 AAATGAAGCTACTTCTCGAATCAAA 57.327 32.000 8.66 0.00 40.73 2.69
7227 9796 7.672983 AATGAAGCTACTTCTCGAATCAAAA 57.327 32.000 8.66 0.00 40.73 2.44
7228 9797 7.672983 ATGAAGCTACTTCTCGAATCAAAAA 57.327 32.000 8.66 0.00 40.73 1.94
7229 9798 7.672983 TGAAGCTACTTCTCGAATCAAAAAT 57.327 32.000 8.66 0.00 40.73 1.82
7230 9799 8.099364 TGAAGCTACTTCTCGAATCAAAAATT 57.901 30.769 8.66 0.00 40.73 1.82
7231 9800 9.214957 TGAAGCTACTTCTCGAATCAAAAATTA 57.785 29.630 8.66 0.00 40.73 1.40
7233 9802 9.827411 AAGCTACTTCTCGAATCAAAAATTAAC 57.173 29.630 0.00 0.00 0.00 2.01
7234 9803 8.169268 AGCTACTTCTCGAATCAAAAATTAACG 58.831 33.333 0.00 0.00 0.00 3.18
7235 9804 8.166706 GCTACTTCTCGAATCAAAAATTAACGA 58.833 33.333 0.00 0.00 0.00 3.85
7238 9807 8.175716 ACTTCTCGAATCAAAAATTAACGATCC 58.824 33.333 0.00 0.00 0.00 3.36
7239 9808 7.011828 TCTCGAATCAAAAATTAACGATCCC 57.988 36.000 0.00 0.00 0.00 3.85
7240 9809 6.821665 TCTCGAATCAAAAATTAACGATCCCT 59.178 34.615 0.00 0.00 0.00 4.20
7241 9810 7.011109 TCTCGAATCAAAAATTAACGATCCCTC 59.989 37.037 0.00 0.00 0.00 4.30
7242 9811 6.596106 TCGAATCAAAAATTAACGATCCCTCA 59.404 34.615 0.00 0.00 0.00 3.86
7243 9812 6.907212 CGAATCAAAAATTAACGATCCCTCAG 59.093 38.462 0.00 0.00 0.00 3.35
7244 9813 6.699575 ATCAAAAATTAACGATCCCTCAGG 57.300 37.500 0.00 0.00 0.00 3.86
7298 9867 9.884636 ATGCTAGTATGTAACATACACTTCAAA 57.115 29.630 7.91 0.00 42.23 2.69
7299 9868 9.713713 TGCTAGTATGTAACATACACTTCAAAA 57.286 29.630 7.91 0.00 42.23 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 2.757980 ATTTACCCAACCGCCACGCT 62.758 55.000 0.00 0.00 0.00 5.07
100 101 2.160813 GCTACACACATTTACCCAACCG 59.839 50.000 0.00 0.00 0.00 4.44
108 109 5.950758 AACCAAATCGCTACACACATTTA 57.049 34.783 0.00 0.00 0.00 1.40
109 110 4.846779 AACCAAATCGCTACACACATTT 57.153 36.364 0.00 0.00 0.00 2.32
111 112 4.846779 AAAACCAAATCGCTACACACAT 57.153 36.364 0.00 0.00 0.00 3.21
116 117 3.717400 TGCAAAAACCAAATCGCTACA 57.283 38.095 0.00 0.00 0.00 2.74
139 140 3.170362 AGCCCCTAGTGCTGCAAA 58.830 55.556 2.77 0.00 37.76 3.68
254 256 4.998671 TCTCAAAAGTGCACATCCAAAA 57.001 36.364 21.04 0.00 0.00 2.44
272 274 9.403110 CAACATATTATGCCAGCTTAATTTCTC 57.597 33.333 13.88 0.00 31.58 2.87
280 282 6.774170 TCAATCTCAACATATTATGCCAGCTT 59.226 34.615 3.52 0.00 0.00 3.74
282 284 6.564709 TCAATCTCAACATATTATGCCAGC 57.435 37.500 3.52 0.00 0.00 4.85
284 286 8.694581 TTCATCAATCTCAACATATTATGCCA 57.305 30.769 3.52 0.00 0.00 4.92
370 372 7.713507 ACAAAAGGAAATTAGCTTTGTAAACCC 59.286 33.333 0.00 0.00 38.19 4.11
379 381 8.478775 AAAGGTCTACAAAAGGAAATTAGCTT 57.521 30.769 0.00 0.00 0.00 3.74
382 384 9.508642 AGAGAAAGGTCTACAAAAGGAAATTAG 57.491 33.333 0.00 0.00 32.80 1.73
400 402 4.574013 AGCAATCGCAGAATTAGAGAAAGG 59.426 41.667 0.00 0.00 43.58 3.11
445 447 7.174772 CACGTCATAATTCATATTGGATTCCCA 59.825 37.037 0.00 0.00 41.64 4.37
446 448 7.362056 CCACGTCATAATTCATATTGGATTCCC 60.362 40.741 0.00 0.00 0.00 3.97
447 449 7.390440 TCCACGTCATAATTCATATTGGATTCC 59.610 37.037 0.00 0.00 27.16 3.01
448 450 8.322906 TCCACGTCATAATTCATATTGGATTC 57.677 34.615 0.00 0.00 27.16 2.52
449 451 8.868522 ATCCACGTCATAATTCATATTGGATT 57.131 30.769 0.00 0.00 35.65 3.01
450 452 8.102676 TGATCCACGTCATAATTCATATTGGAT 58.897 33.333 0.00 0.00 39.21 3.41
451 453 7.387673 GTGATCCACGTCATAATTCATATTGGA 59.612 37.037 0.00 0.00 33.68 3.53
452 454 7.173047 TGTGATCCACGTCATAATTCATATTGG 59.827 37.037 0.00 0.00 37.14 3.16
453 455 8.086851 TGTGATCCACGTCATAATTCATATTG 57.913 34.615 0.00 0.00 37.14 1.90
454 456 8.853077 ATGTGATCCACGTCATAATTCATATT 57.147 30.769 0.00 0.00 37.14 1.28
455 457 7.276438 CGATGTGATCCACGTCATAATTCATAT 59.724 37.037 16.54 0.00 46.98 1.78
456 458 6.586082 CGATGTGATCCACGTCATAATTCATA 59.414 38.462 16.54 0.00 46.98 2.15
457 459 5.406477 CGATGTGATCCACGTCATAATTCAT 59.594 40.000 16.54 0.00 46.98 2.57
458 460 4.744631 CGATGTGATCCACGTCATAATTCA 59.255 41.667 16.54 0.00 46.98 2.57
459 461 4.982295 TCGATGTGATCCACGTCATAATTC 59.018 41.667 16.54 0.00 46.98 2.17
460 462 4.944048 TCGATGTGATCCACGTCATAATT 58.056 39.130 16.54 0.00 46.98 1.40
461 463 4.584327 TCGATGTGATCCACGTCATAAT 57.416 40.909 16.54 0.00 46.98 1.28
462 464 4.584327 ATCGATGTGATCCACGTCATAA 57.416 40.909 16.54 4.91 46.98 1.90
463 465 4.584327 AATCGATGTGATCCACGTCATA 57.416 40.909 16.54 6.87 46.98 2.15
464 466 3.459232 AATCGATGTGATCCACGTCAT 57.541 42.857 16.54 8.44 46.98 3.06
465 467 2.959507 AATCGATGTGATCCACGTCA 57.040 45.000 16.54 6.90 46.98 4.35
466 468 3.448686 AGAAATCGATGTGATCCACGTC 58.551 45.455 0.00 8.76 44.25 4.34
467 469 3.526931 AGAAATCGATGTGATCCACGT 57.473 42.857 0.00 0.00 35.84 4.49
468 470 4.864916 AAAGAAATCGATGTGATCCACG 57.135 40.909 0.00 0.00 35.84 4.94
469 471 6.611381 TCAAAAAGAAATCGATGTGATCCAC 58.389 36.000 0.00 0.00 35.84 4.02
470 472 6.816134 TCAAAAAGAAATCGATGTGATCCA 57.184 33.333 0.00 0.00 35.84 3.41
471 473 8.693542 AATTCAAAAAGAAATCGATGTGATCC 57.306 30.769 0.00 0.00 40.22 3.36
473 475 9.918630 AGAAATTCAAAAAGAAATCGATGTGAT 57.081 25.926 0.00 0.00 40.22 3.06
492 494 9.916397 CCGAAGTAATTACACACATAGAAATTC 57.084 33.333 17.65 6.98 0.00 2.17
493 495 9.661563 TCCGAAGTAATTACACACATAGAAATT 57.338 29.630 17.65 0.00 0.00 1.82
494 496 9.661563 TTCCGAAGTAATTACACACATAGAAAT 57.338 29.630 17.65 0.00 0.00 2.17
495 497 8.928733 GTTCCGAAGTAATTACACACATAGAAA 58.071 33.333 17.65 0.00 0.00 2.52
496 498 8.308931 AGTTCCGAAGTAATTACACACATAGAA 58.691 33.333 17.65 7.97 0.00 2.10
497 499 7.833786 AGTTCCGAAGTAATTACACACATAGA 58.166 34.615 17.65 2.67 0.00 1.98
498 500 8.380644 CAAGTTCCGAAGTAATTACACACATAG 58.619 37.037 17.65 2.22 0.00 2.23
499 501 8.089597 TCAAGTTCCGAAGTAATTACACACATA 58.910 33.333 17.65 0.00 0.00 2.29
500 502 6.932400 TCAAGTTCCGAAGTAATTACACACAT 59.068 34.615 17.65 0.00 0.00 3.21
501 503 6.282167 TCAAGTTCCGAAGTAATTACACACA 58.718 36.000 17.65 0.00 0.00 3.72
502 504 6.774354 TCAAGTTCCGAAGTAATTACACAC 57.226 37.500 17.65 7.35 0.00 3.82
503 505 7.876068 AGATTCAAGTTCCGAAGTAATTACACA 59.124 33.333 17.65 0.00 0.00 3.72
504 506 8.169268 CAGATTCAAGTTCCGAAGTAATTACAC 58.831 37.037 17.65 9.92 0.00 2.90
505 507 8.092068 TCAGATTCAAGTTCCGAAGTAATTACA 58.908 33.333 17.65 0.00 0.00 2.41
506 508 8.475331 TCAGATTCAAGTTCCGAAGTAATTAC 57.525 34.615 7.57 7.57 0.00 1.89
507 509 8.311836 ACTCAGATTCAAGTTCCGAAGTAATTA 58.688 33.333 0.00 0.00 0.00 1.40
508 510 7.162082 ACTCAGATTCAAGTTCCGAAGTAATT 58.838 34.615 0.00 0.00 0.00 1.40
509 511 6.702329 ACTCAGATTCAAGTTCCGAAGTAAT 58.298 36.000 0.00 0.00 0.00 1.89
510 512 6.015350 AGACTCAGATTCAAGTTCCGAAGTAA 60.015 38.462 0.00 0.00 0.00 2.24
511 513 5.477291 AGACTCAGATTCAAGTTCCGAAGTA 59.523 40.000 0.00 0.00 0.00 2.24
512 514 4.282195 AGACTCAGATTCAAGTTCCGAAGT 59.718 41.667 0.00 0.00 0.00 3.01
513 515 4.815269 AGACTCAGATTCAAGTTCCGAAG 58.185 43.478 0.00 0.00 0.00 3.79
514 516 4.873746 AGACTCAGATTCAAGTTCCGAA 57.126 40.909 0.00 0.00 0.00 4.30
515 517 6.531503 AATAGACTCAGATTCAAGTTCCGA 57.468 37.500 0.00 0.00 0.00 4.55
516 518 7.602517 AAAATAGACTCAGATTCAAGTTCCG 57.397 36.000 0.00 0.00 0.00 4.30
517 519 9.225436 AGAAAAATAGACTCAGATTCAAGTTCC 57.775 33.333 0.00 0.00 0.00 3.62
547 549 9.010029 AGAACAAATTCCGAAGTAATTACACAT 57.990 29.630 17.65 3.55 35.18 3.21
548 550 8.385898 AGAACAAATTCCGAAGTAATTACACA 57.614 30.769 17.65 0.00 35.18 3.72
549 551 9.326339 GAAGAACAAATTCCGAAGTAATTACAC 57.674 33.333 17.65 9.92 35.18 2.90
550 552 8.225107 CGAAGAACAAATTCCGAAGTAATTACA 58.775 33.333 17.65 0.00 35.18 2.41
551 553 8.225777 ACGAAGAACAAATTCCGAAGTAATTAC 58.774 33.333 7.57 7.57 35.18 1.89
552 554 8.314143 ACGAAGAACAAATTCCGAAGTAATTA 57.686 30.769 0.00 0.00 35.18 1.40
553 555 7.198306 ACGAAGAACAAATTCCGAAGTAATT 57.802 32.000 0.00 0.00 35.18 1.40
554 556 6.796705 ACGAAGAACAAATTCCGAAGTAAT 57.203 33.333 0.00 0.00 35.18 1.89
555 557 7.147312 TCTACGAAGAACAAATTCCGAAGTAA 58.853 34.615 0.00 0.00 35.18 2.24
556 558 6.680810 TCTACGAAGAACAAATTCCGAAGTA 58.319 36.000 0.00 0.00 35.18 2.24
557 559 5.535333 TCTACGAAGAACAAATTCCGAAGT 58.465 37.500 0.00 0.00 35.18 3.01
558 560 6.310467 TCATCTACGAAGAACAAATTCCGAAG 59.690 38.462 0.00 0.00 35.18 3.79
559 561 6.160684 TCATCTACGAAGAACAAATTCCGAA 58.839 36.000 0.00 0.00 35.18 4.30
560 562 5.716094 TCATCTACGAAGAACAAATTCCGA 58.284 37.500 0.00 0.00 35.18 4.55
561 563 6.414079 CATCATCTACGAAGAACAAATTCCG 58.586 40.000 0.00 0.00 35.18 4.30
562 564 6.238484 CCCATCATCTACGAAGAACAAATTCC 60.238 42.308 0.00 0.00 35.18 3.01
563 565 6.538742 TCCCATCATCTACGAAGAACAAATTC 59.461 38.462 0.00 0.00 34.73 2.17
564 566 6.414732 TCCCATCATCTACGAAGAACAAATT 58.585 36.000 0.00 0.00 34.73 1.82
565 567 5.989477 TCCCATCATCTACGAAGAACAAAT 58.011 37.500 0.00 0.00 34.73 2.32
566 568 5.414789 TCCCATCATCTACGAAGAACAAA 57.585 39.130 0.00 0.00 34.73 2.83
567 569 5.104941 ACATCCCATCATCTACGAAGAACAA 60.105 40.000 0.00 0.00 34.73 2.83
568 570 4.405680 ACATCCCATCATCTACGAAGAACA 59.594 41.667 0.00 0.00 34.73 3.18
569 571 4.950050 ACATCCCATCATCTACGAAGAAC 58.050 43.478 0.00 0.00 34.73 3.01
570 572 4.895889 AGACATCCCATCATCTACGAAGAA 59.104 41.667 0.00 0.00 34.73 2.52
620 622 8.044060 TCTCGCATTATTCTGTTTCAGATTTT 57.956 30.769 0.24 0.00 40.39 1.82
623 625 7.798596 ATTCTCGCATTATTCTGTTTCAGAT 57.201 32.000 0.24 0.00 40.39 2.90
624 626 7.615582 AATTCTCGCATTATTCTGTTTCAGA 57.384 32.000 0.00 0.00 38.87 3.27
626 628 8.716646 TCTAATTCTCGCATTATTCTGTTTCA 57.283 30.769 0.00 0.00 0.00 2.69
627 629 9.804547 GATCTAATTCTCGCATTATTCTGTTTC 57.195 33.333 0.00 0.00 0.00 2.78
628 630 8.778358 GGATCTAATTCTCGCATTATTCTGTTT 58.222 33.333 0.00 0.00 0.00 2.83
629 631 7.933577 TGGATCTAATTCTCGCATTATTCTGTT 59.066 33.333 0.00 0.00 0.00 3.16
645 719 6.369065 GTGAAGTCGTGAAGTTGGATCTAATT 59.631 38.462 0.00 0.00 0.00 1.40
647 721 5.010719 AGTGAAGTCGTGAAGTTGGATCTAA 59.989 40.000 0.00 0.00 0.00 2.10
648 722 4.523173 AGTGAAGTCGTGAAGTTGGATCTA 59.477 41.667 0.00 0.00 0.00 1.98
651 725 3.753294 AGTGAAGTCGTGAAGTTGGAT 57.247 42.857 0.00 0.00 0.00 3.41
652 726 3.536956 AAGTGAAGTCGTGAAGTTGGA 57.463 42.857 0.00 0.00 0.00 3.53
683 757 9.875691 CAGCAGTACACAACCACATATATATAT 57.124 33.333 0.00 0.00 0.00 0.86
684 758 8.866093 ACAGCAGTACACAACCACATATATATA 58.134 33.333 0.00 0.00 0.00 0.86
685 759 7.735917 ACAGCAGTACACAACCACATATATAT 58.264 34.615 0.00 0.00 0.00 0.86
686 760 7.119709 ACAGCAGTACACAACCACATATATA 57.880 36.000 0.00 0.00 0.00 0.86
687 761 5.989477 ACAGCAGTACACAACCACATATAT 58.011 37.500 0.00 0.00 0.00 0.86
696 770 9.529325 TGATAAGATATAACAGCAGTACACAAC 57.471 33.333 0.00 0.00 0.00 3.32
788 1774 9.364653 AGTTGGGAGTATTAGTATTAGATTCGT 57.635 33.333 0.00 0.00 0.00 3.85
789 1775 9.627395 CAGTTGGGAGTATTAGTATTAGATTCG 57.373 37.037 0.00 0.00 0.00 3.34
800 1788 5.928839 CGGATTCATCAGTTGGGAGTATTAG 59.071 44.000 0.00 0.00 0.00 1.73
828 1816 3.282838 TCCAGGAGAGGACACCCA 58.717 61.111 0.00 0.00 31.23 4.51
859 1847 1.334869 CAAGTTTATCAGGATGCGCCC 59.665 52.381 4.18 0.00 37.37 6.13
911 1899 0.391263 CGAGGAGGTTTAGGGTGTGC 60.391 60.000 0.00 0.00 0.00 4.57
984 1974 1.512734 CATTGCTGCTTTCGACGGC 60.513 57.895 0.00 0.00 39.96 5.68
1146 2136 4.365111 TGGGAGCGGCATGGCTTT 62.365 61.111 18.09 4.83 44.93 3.51
1205 2195 4.419921 ACCAAATCCGGCCGGGTC 62.420 66.667 42.36 0.00 37.00 4.46
1228 2218 2.735151 TCTAGAAGGCAGGATCAACGA 58.265 47.619 0.00 0.00 0.00 3.85
1241 2231 5.008811 ACCGACGGAGATGTAAATCTAGAAG 59.991 44.000 23.38 0.00 0.00 2.85
1243 2233 4.275196 CACCGACGGAGATGTAAATCTAGA 59.725 45.833 23.38 0.00 0.00 2.43
1282 2272 0.671796 ACACACACCGAATCGACAGA 59.328 50.000 3.36 0.00 0.00 3.41
1407 2397 1.619057 TCCACATCCATGGCCTCCA 60.619 57.895 6.96 0.00 39.85 3.86
1474 2464 3.055891 ACATATGAAACAAGCCCTTTGCC 60.056 43.478 10.38 0.00 42.71 4.52
1483 2473 7.742151 TCGAAATCTGTCACATATGAAACAAG 58.258 34.615 10.38 7.32 36.31 3.16
1486 2476 7.164826 GCATTCGAAATCTGTCACATATGAAAC 59.835 37.037 10.38 7.44 36.31 2.78
1493 2483 4.093998 GTCAGCATTCGAAATCTGTCACAT 59.906 41.667 21.62 0.00 0.00 3.21
1512 2502 3.495193 CAGAATCAAAACATGCCGTCAG 58.505 45.455 0.00 0.00 0.00 3.51
1519 2509 4.778534 ACTCTGCCAGAATCAAAACATG 57.221 40.909 0.00 0.00 0.00 3.21
1520 2510 4.021719 CCAACTCTGCCAGAATCAAAACAT 60.022 41.667 0.00 0.00 0.00 2.71
1546 2536 2.328099 CCTTGTTCACCTCTGGCGC 61.328 63.158 0.00 0.00 0.00 6.53
1587 2577 1.135315 CGCAGTCGAAAAGCCCATG 59.865 57.895 0.00 0.00 38.10 3.66
1649 2639 1.622811 AGTCAAAGGAGTCAGAGGCTG 59.377 52.381 0.00 0.00 0.00 4.85
1958 2953 4.145365 TCACCCCCGTTCATATTTGTAG 57.855 45.455 0.00 0.00 0.00 2.74
1966 2961 3.971305 TCAGTATTATCACCCCCGTTCAT 59.029 43.478 0.00 0.00 0.00 2.57
1972 2967 5.012354 TCGGTTATTCAGTATTATCACCCCC 59.988 44.000 0.00 0.00 0.00 5.40
2148 3179 7.876068 CCTATGTAAAAGTACACAGGTTCAGAA 59.124 37.037 3.49 0.00 46.07 3.02
2149 3180 7.383687 CCTATGTAAAAGTACACAGGTTCAGA 58.616 38.462 3.49 0.00 46.07 3.27
2157 3212 9.590451 GTGCTATTACCTATGTAAAAGTACACA 57.410 33.333 0.00 0.00 42.99 3.72
2229 3284 9.404848 CATACCATAGGCATTTCATCAATATCT 57.595 33.333 0.00 0.00 0.00 1.98
2408 3464 9.622004 GAAGCATGGATAACATATCAAAGAATG 57.378 33.333 0.00 0.00 37.84 2.67
2476 3532 5.600484 ACCATGTCATTTGGGAAAAGTACAA 59.400 36.000 0.00 0.00 38.64 2.41
2582 3638 6.655078 AGTGAACACATCCAATTAAAGCTT 57.345 33.333 7.68 0.00 0.00 3.74
2682 3738 2.040278 TGGAAGCAGCAATAAGTGGAGT 59.960 45.455 0.00 0.00 0.00 3.85
2749 3805 5.376625 AGATGCTCAGTGGACAAAACTAAA 58.623 37.500 0.00 0.00 0.00 1.85
2777 3833 0.385974 GCGACCATTGAACACACTGC 60.386 55.000 0.00 0.00 0.00 4.40
2794 3850 2.931969 TGTCAGCAACATCTATTCAGCG 59.068 45.455 0.00 0.00 31.20 5.18
2809 3865 2.878406 TGTTCTAGCCAAAAGTGTCAGC 59.122 45.455 0.00 0.00 0.00 4.26
3051 4107 5.783100 TTAGTACAACGAAAAATAGCCCG 57.217 39.130 0.00 0.00 0.00 6.13
3072 4128 8.522830 AGTATCCAAATGTCAACGAATTGATTT 58.477 29.630 0.00 0.00 46.43 2.17
3232 4288 7.289587 AGTGTTGTAAAAACTGCACATTTTC 57.710 32.000 7.73 2.94 44.40 2.29
3304 4360 8.593945 ACTATGCCCTTTATTCTGAATCAAAA 57.406 30.769 6.10 2.47 0.00 2.44
3307 4363 8.271458 TGTTACTATGCCCTTTATTCTGAATCA 58.729 33.333 6.10 0.00 0.00 2.57
3370 4427 4.039609 TCAAGACAAGTGCTCTTCATCTCA 59.960 41.667 10.68 1.74 30.41 3.27
3376 4434 4.122776 TGAGTTCAAGACAAGTGCTCTTC 58.877 43.478 0.00 0.00 0.00 2.87
3419 4477 9.542462 CGAGGTGTCTTGGAAGAAAATATTATA 57.458 33.333 0.00 0.00 36.68 0.98
3467 4525 1.374343 TACGAGCACGCTCCCTACAG 61.374 60.000 13.24 1.05 43.96 2.74
3899 5083 6.670695 AATAAACTCCTTCCACTTGCAAAT 57.329 33.333 0.00 0.00 0.00 2.32
3900 5084 6.478512 AAATAAACTCCTTCCACTTGCAAA 57.521 33.333 0.00 0.00 0.00 3.68
3901 5085 6.478512 AAAATAAACTCCTTCCACTTGCAA 57.521 33.333 0.00 0.00 0.00 4.08
3902 5086 7.775053 ATAAAATAAACTCCTTCCACTTGCA 57.225 32.000 0.00 0.00 0.00 4.08
3903 5087 9.489084 AAAATAAAATAAACTCCTTCCACTTGC 57.511 29.630 0.00 0.00 0.00 4.01
4175 5385 6.183360 GCCATTACTTTCTAATGTTGAGCCAT 60.183 38.462 0.00 0.00 34.13 4.40
4452 6323 8.762645 TCTTTCTCAAGCCTTCTCAATTCTATA 58.237 33.333 0.00 0.00 0.00 1.31
4799 6873 1.071471 CTCTTCAACAGGCGGTGGT 59.929 57.895 0.00 0.00 0.00 4.16
4836 6910 3.576078 ATGGCAAGGTCAATCGGATTA 57.424 42.857 2.35 0.00 0.00 1.75
4887 6961 9.176181 GTGTAATGTCGTGTTTAAATTGACAAT 57.824 29.630 18.05 14.30 42.24 2.71
4915 6989 3.942130 GGCAACTTAGGTGCTCAAAAT 57.058 42.857 22.14 0.00 0.00 1.82
4974 7048 6.049790 AGAAGTGAGAGGTTCAAAAGTACAC 58.950 40.000 0.00 0.00 37.61 2.90
5038 7112 1.134551 GCTGCCCAACCAGAAAACAAA 60.135 47.619 0.00 0.00 34.77 2.83
5257 7363 9.722056 GTGATCCATAGTTCACATCAAATTAAC 57.278 33.333 0.00 0.00 40.82 2.01
5284 7390 2.084546 GTGTCAAACTGCTCCCATACC 58.915 52.381 0.00 0.00 0.00 2.73
5285 7391 2.778299 TGTGTCAAACTGCTCCCATAC 58.222 47.619 0.00 0.00 0.00 2.39
5378 7485 2.106511 AGACCTTCAAAACCTGCAGCTA 59.893 45.455 8.66 0.00 0.00 3.32
5538 7755 5.096521 AGCAATGTATATCAGGAGATCCCA 58.903 41.667 0.00 0.00 37.41 4.37
5625 7842 5.779922 TCATAGTCCCGATAGTATGCAAAC 58.220 41.667 0.00 0.00 34.21 2.93
5953 8172 1.112113 TTCCGATGTAGGTGAGGAGC 58.888 55.000 0.00 0.00 32.03 4.70
6007 8226 6.341316 TGTAGCATTGGTAAGTCTGATCTTC 58.659 40.000 0.00 0.00 0.00 2.87
6042 8261 0.038310 CAGTCCAGGGAAAGGGGAAC 59.962 60.000 0.00 0.00 31.32 3.62
6048 8267 3.252458 CGTTTTTACCAGTCCAGGGAAAG 59.748 47.826 0.00 0.00 42.27 2.62
6074 8294 1.476291 GGTTATTCGGCAGGTTAGGGG 60.476 57.143 0.00 0.00 0.00 4.79
6160 8380 4.988598 AACCCGCACAGCACGAGG 62.989 66.667 0.00 0.00 0.00 4.63
6165 8385 0.749818 TTTCTCAAACCCGCACAGCA 60.750 50.000 0.00 0.00 0.00 4.41
6265 8485 2.034999 GGGTTGGTGATGGCGGAA 59.965 61.111 0.00 0.00 0.00 4.30
6310 8530 0.179702 GGAGGGAATACAACGGGGAC 59.820 60.000 0.00 0.00 0.00 4.46
6341 8561 1.290203 CCACATTCCCGATTCAGACG 58.710 55.000 0.00 0.00 0.00 4.18
6394 8614 7.600375 GTCCGATATTTCTCATAAGCAAGATCA 59.400 37.037 0.00 0.00 29.21 2.92
6395 8615 7.600375 TGTCCGATATTTCTCATAAGCAAGATC 59.400 37.037 0.00 0.00 0.00 2.75
6417 8638 3.462483 AAAAATTTCCCCGTGTTGTCC 57.538 42.857 0.00 0.00 0.00 4.02
6445 8670 6.433847 TCTTCTTTGGATAGAACCAGTTCA 57.566 37.500 12.76 0.08 41.84 3.18
6454 8679 8.386264 ACTTTGGAAAGATCTTCTTTGGATAGA 58.614 33.333 8.78 0.00 45.85 1.98
6541 9072 4.379394 CCCCACGTTGTTGATCTTTACATG 60.379 45.833 0.00 0.00 0.00 3.21
6566 9097 4.676196 GCATCACCTGTTGGATTCAATGAC 60.676 45.833 0.00 0.00 35.10 3.06
6584 9115 5.185635 AGGCTACTTTTATTTTGCTGCATCA 59.814 36.000 1.84 0.00 0.00 3.07
6585 9116 5.654497 AGGCTACTTTTATTTTGCTGCATC 58.346 37.500 1.84 0.00 0.00 3.91
6588 9125 6.196079 AGTAGGCTACTTTTATTTTGCTGC 57.804 37.500 21.30 0.00 34.86 5.25
6617 9154 1.915141 TTTCGGACGGAAGGAGTACT 58.085 50.000 0.00 0.00 35.70 2.73
6618 9155 2.730550 TTTTCGGACGGAAGGAGTAC 57.269 50.000 0.00 0.00 35.70 2.73
6621 9158 3.521947 AGTATTTTCGGACGGAAGGAG 57.478 47.619 0.00 0.00 35.70 3.69
6622 9159 3.007182 ACAAGTATTTTCGGACGGAAGGA 59.993 43.478 0.00 0.00 35.70 3.36
6623 9160 3.332034 ACAAGTATTTTCGGACGGAAGG 58.668 45.455 0.00 0.00 35.70 3.46
6624 9161 3.991773 TGACAAGTATTTTCGGACGGAAG 59.008 43.478 0.00 0.00 35.70 3.46
6626 9163 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
6627 9164 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
6628 9165 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
6629 9166 9.490663 CTATTTTGATGACAAGTATTTTCGGAC 57.509 33.333 0.00 0.00 37.32 4.79
6630 9167 9.443323 TCTATTTTGATGACAAGTATTTTCGGA 57.557 29.630 0.00 0.00 37.32 4.55
6639 9176 8.971073 CCCCTTTTATCTATTTTGATGACAAGT 58.029 33.333 0.00 0.00 37.32 3.16
6640 9177 9.189156 TCCCCTTTTATCTATTTTGATGACAAG 57.811 33.333 0.00 0.00 37.32 3.16
6642 9179 9.135189 CATCCCCTTTTATCTATTTTGATGACA 57.865 33.333 0.00 0.00 0.00 3.58
6643 9180 9.136323 ACATCCCCTTTTATCTATTTTGATGAC 57.864 33.333 0.00 0.00 32.39 3.06
6661 9198 9.845214 AGTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
6699 9236 9.918630 ACTTGTCATCAAAATGGATAAAAAGAG 57.081 29.630 0.00 0.00 33.42 2.85
6707 9244 9.865321 CTGAAAATACTTGTCATCAAAATGGAT 57.135 29.630 0.00 0.00 33.42 3.41
6708 9245 9.076781 TCTGAAAATACTTGTCATCAAAATGGA 57.923 29.630 0.00 0.00 33.42 3.41
6709 9246 9.865321 ATCTGAAAATACTTGTCATCAAAATGG 57.135 29.630 0.00 0.00 33.42 3.16
6711 9248 9.865321 CCATCTGAAAATACTTGTCATCAAAAT 57.135 29.630 0.00 0.00 32.87 1.82
6712 9249 9.076781 TCCATCTGAAAATACTTGTCATCAAAA 57.923 29.630 0.00 0.00 32.87 2.44
6713 9250 8.634335 TCCATCTGAAAATACTTGTCATCAAA 57.366 30.769 0.00 0.00 32.87 2.69
6714 9251 8.680001 CATCCATCTGAAAATACTTGTCATCAA 58.320 33.333 0.00 0.00 0.00 2.57
6715 9252 7.283807 CCATCCATCTGAAAATACTTGTCATCA 59.716 37.037 0.00 0.00 0.00 3.07
6716 9253 7.500227 TCCATCCATCTGAAAATACTTGTCATC 59.500 37.037 0.00 0.00 0.00 2.92
6717 9254 7.348815 TCCATCCATCTGAAAATACTTGTCAT 58.651 34.615 0.00 0.00 0.00 3.06
6718 9255 6.720309 TCCATCCATCTGAAAATACTTGTCA 58.280 36.000 0.00 0.00 0.00 3.58
6719 9256 6.825721 ACTCCATCCATCTGAAAATACTTGTC 59.174 38.462 0.00 0.00 0.00 3.18
6720 9257 6.725364 ACTCCATCCATCTGAAAATACTTGT 58.275 36.000 0.00 0.00 0.00 3.16
6721 9258 8.915057 ATACTCCATCCATCTGAAAATACTTG 57.085 34.615 0.00 0.00 0.00 3.16
6726 9263 8.663167 TGTGATATACTCCATCCATCTGAAAAT 58.337 33.333 0.00 0.00 0.00 1.82
6727 9264 8.033178 TGTGATATACTCCATCCATCTGAAAA 57.967 34.615 0.00 0.00 0.00 2.29
6728 9265 7.616528 TGTGATATACTCCATCCATCTGAAA 57.383 36.000 0.00 0.00 0.00 2.69
6729 9266 7.510343 TCTTGTGATATACTCCATCCATCTGAA 59.490 37.037 0.00 0.00 0.00 3.02
6730 9267 7.012607 TCTTGTGATATACTCCATCCATCTGA 58.987 38.462 0.00 0.00 0.00 3.27
6731 9268 7.237209 TCTTGTGATATACTCCATCCATCTG 57.763 40.000 0.00 0.00 0.00 2.90
6732 9269 7.862274 TTCTTGTGATATACTCCATCCATCT 57.138 36.000 0.00 0.00 0.00 2.90
6733 9270 7.933577 TGTTTCTTGTGATATACTCCATCCATC 59.066 37.037 0.00 0.00 0.00 3.51
6734 9271 7.805163 TGTTTCTTGTGATATACTCCATCCAT 58.195 34.615 0.00 0.00 0.00 3.41
6735 9272 7.194112 TGTTTCTTGTGATATACTCCATCCA 57.806 36.000 0.00 0.00 0.00 3.41
6736 9273 8.506168 TTTGTTTCTTGTGATATACTCCATCC 57.494 34.615 0.00 0.00 0.00 3.51
6742 9279 9.846248 GCAGAAATTTGTTTCTTGTGATATACT 57.154 29.630 0.00 0.00 39.10 2.12
6743 9280 9.846248 AGCAGAAATTTGTTTCTTGTGATATAC 57.154 29.630 0.00 0.00 39.10 1.47
6744 9281 9.844790 CAGCAGAAATTTGTTTCTTGTGATATA 57.155 29.630 0.00 0.00 39.10 0.86
6745 9282 7.330208 GCAGCAGAAATTTGTTTCTTGTGATAT 59.670 33.333 0.00 0.00 39.10 1.63
6772 9309 2.404215 GATATACCTTCGTGTGCGCAT 58.596 47.619 15.91 0.00 38.14 4.73
6774 9311 1.137513 GGATATACCTTCGTGTGCGC 58.862 55.000 0.00 0.00 35.28 6.09
6775 9312 2.124903 GTGGATATACCTTCGTGTGCG 58.875 52.381 0.00 0.00 39.86 5.34
6776 9313 2.864343 GTGTGGATATACCTTCGTGTGC 59.136 50.000 0.00 0.00 39.86 4.57
6778 9315 4.161565 ACATGTGTGGATATACCTTCGTGT 59.838 41.667 0.00 0.00 39.86 4.49
6779 9316 4.693283 ACATGTGTGGATATACCTTCGTG 58.307 43.478 0.00 0.00 39.86 4.35
6780 9317 5.509163 GCTACATGTGTGGATATACCTTCGT 60.509 44.000 9.11 0.00 39.86 3.85
6781 9318 4.923871 GCTACATGTGTGGATATACCTTCG 59.076 45.833 9.11 0.00 39.86 3.79
6782 9319 5.696724 GTGCTACATGTGTGGATATACCTTC 59.303 44.000 9.11 0.00 39.86 3.46
6783 9320 5.130311 TGTGCTACATGTGTGGATATACCTT 59.870 40.000 9.11 0.00 39.86 3.50
6784 9321 4.653801 TGTGCTACATGTGTGGATATACCT 59.346 41.667 9.11 0.00 39.86 3.08
6785 9322 4.956085 TGTGCTACATGTGTGGATATACC 58.044 43.478 9.11 0.00 39.54 2.73
6804 9341 0.870393 AAGAGCACTTCGCACATGTG 59.130 50.000 21.83 21.83 46.13 3.21
6805 9342 1.597742 AAAGAGCACTTCGCACATGT 58.402 45.000 0.00 0.00 46.13 3.21
6817 9354 0.246635 GCCGACTCAGGTAAAGAGCA 59.753 55.000 0.00 0.00 36.58 4.26
6823 9360 3.766691 GGGCGCCGACTCAGGTAA 61.767 66.667 22.54 0.00 0.00 2.85
6836 9373 2.771328 AAAAAGCAGAGGAGGGGGCG 62.771 60.000 0.00 0.00 0.00 6.13
6853 9390 2.151369 AGGAGGGTCCTCGCAAAAA 58.849 52.632 10.55 0.00 45.66 1.94
6854 9391 3.900888 AGGAGGGTCCTCGCAAAA 58.099 55.556 10.55 0.00 45.66 2.44
6862 9399 1.477685 TTCACAACGGAGGAGGGTCC 61.478 60.000 0.00 0.00 36.58 4.46
6863 9400 0.613777 ATTCACAACGGAGGAGGGTC 59.386 55.000 0.00 0.00 0.00 4.46
6864 9401 1.946984 TATTCACAACGGAGGAGGGT 58.053 50.000 0.00 0.00 0.00 4.34
6878 9415 6.464222 CAGTAGAGGGTTCACAACTTATTCA 58.536 40.000 0.00 0.00 0.00 2.57
6879 9416 5.875359 CCAGTAGAGGGTTCACAACTTATTC 59.125 44.000 0.00 0.00 0.00 1.75
6880 9417 5.546499 TCCAGTAGAGGGTTCACAACTTATT 59.454 40.000 0.00 0.00 0.00 1.40
6881 9418 5.091552 TCCAGTAGAGGGTTCACAACTTAT 58.908 41.667 0.00 0.00 0.00 1.73
6882 9419 4.485875 TCCAGTAGAGGGTTCACAACTTA 58.514 43.478 0.00 0.00 0.00 2.24
6883 9420 3.314693 TCCAGTAGAGGGTTCACAACTT 58.685 45.455 0.00 0.00 0.00 2.66
6884 9421 2.972348 TCCAGTAGAGGGTTCACAACT 58.028 47.619 0.00 0.00 0.00 3.16
6885 9422 3.600388 CATCCAGTAGAGGGTTCACAAC 58.400 50.000 0.00 0.00 0.00 3.32
6886 9423 2.571653 CCATCCAGTAGAGGGTTCACAA 59.428 50.000 0.00 0.00 41.75 3.33
6887 9424 2.187958 CCATCCAGTAGAGGGTTCACA 58.812 52.381 0.00 0.00 41.75 3.58
6889 9426 2.626950 CCTCCATCCAGTAGAGGGTTCA 60.627 54.545 0.00 0.00 46.94 3.18
6890 9427 2.043227 CCTCCATCCAGTAGAGGGTTC 58.957 57.143 0.00 0.00 46.94 3.62
6891 9428 2.182516 CCTCCATCCAGTAGAGGGTT 57.817 55.000 0.00 0.00 46.94 4.11
6892 9429 3.957188 CCTCCATCCAGTAGAGGGT 57.043 57.895 0.00 0.00 46.94 4.34
6895 9432 3.917300 ACCTAACCTCCATCCAGTAGAG 58.083 50.000 0.00 0.00 0.00 2.43
6897 9434 4.290942 AGAACCTAACCTCCATCCAGTAG 58.709 47.826 0.00 0.00 0.00 2.57
6898 9435 4.348020 AGAACCTAACCTCCATCCAGTA 57.652 45.455 0.00 0.00 0.00 2.74
6899 9436 3.207044 AGAACCTAACCTCCATCCAGT 57.793 47.619 0.00 0.00 0.00 4.00
6900 9437 4.265073 CAAAGAACCTAACCTCCATCCAG 58.735 47.826 0.00 0.00 0.00 3.86
6901 9438 3.010138 CCAAAGAACCTAACCTCCATCCA 59.990 47.826 0.00 0.00 0.00 3.41
6902 9439 3.621558 CCAAAGAACCTAACCTCCATCC 58.378 50.000 0.00 0.00 0.00 3.51
6903 9440 3.017442 GCCAAAGAACCTAACCTCCATC 58.983 50.000 0.00 0.00 0.00 3.51
6904 9441 2.649816 AGCCAAAGAACCTAACCTCCAT 59.350 45.455 0.00 0.00 0.00 3.41
6906 9443 2.881111 AGCCAAAGAACCTAACCTCC 57.119 50.000 0.00 0.00 0.00 4.30
6907 9444 3.255888 CCAAAGCCAAAGAACCTAACCTC 59.744 47.826 0.00 0.00 0.00 3.85
6908 9445 3.230976 CCAAAGCCAAAGAACCTAACCT 58.769 45.455 0.00 0.00 0.00 3.50
6909 9446 2.288825 GCCAAAGCCAAAGAACCTAACC 60.289 50.000 0.00 0.00 0.00 2.85
6910 9447 2.364002 TGCCAAAGCCAAAGAACCTAAC 59.636 45.455 0.00 0.00 38.69 2.34
6914 9451 2.323968 TTTGCCAAAGCCAAAGAACC 57.676 45.000 0.00 0.00 38.69 3.62
6915 9452 4.576053 AGAAATTTGCCAAAGCCAAAGAAC 59.424 37.500 0.00 0.00 38.69 3.01
6916 9453 4.779696 AGAAATTTGCCAAAGCCAAAGAA 58.220 34.783 0.00 0.00 38.69 2.52
6917 9454 4.420522 AGAAATTTGCCAAAGCCAAAGA 57.579 36.364 0.00 0.00 38.69 2.52
6918 9455 6.616774 TTTAGAAATTTGCCAAAGCCAAAG 57.383 33.333 0.00 0.00 38.69 2.77
6919 9456 7.121907 ACTTTTTAGAAATTTGCCAAAGCCAAA 59.878 29.630 0.00 0.00 38.69 3.28
6920 9457 6.601217 ACTTTTTAGAAATTTGCCAAAGCCAA 59.399 30.769 0.00 0.00 38.69 4.52
6921 9458 6.118852 ACTTTTTAGAAATTTGCCAAAGCCA 58.881 32.000 0.00 0.00 38.69 4.75
6923 9460 7.471721 ACAACTTTTTAGAAATTTGCCAAAGC 58.528 30.769 8.25 0.00 38.34 3.51
6927 9464 9.660180 AGTTAACAACTTTTTAGAAATTTGCCA 57.340 25.926 8.61 0.00 39.04 4.92
6997 9534 5.867174 AGCTTTGCGACTTGTTTTAGTTTTT 59.133 32.000 0.00 0.00 0.00 1.94
6998 9535 5.407502 AGCTTTGCGACTTGTTTTAGTTTT 58.592 33.333 0.00 0.00 0.00 2.43
6999 9536 4.993905 AGCTTTGCGACTTGTTTTAGTTT 58.006 34.783 0.00 0.00 0.00 2.66
7000 9537 4.632538 AGCTTTGCGACTTGTTTTAGTT 57.367 36.364 0.00 0.00 0.00 2.24
7001 9538 4.335594 AGAAGCTTTGCGACTTGTTTTAGT 59.664 37.500 0.00 0.00 0.00 2.24
7002 9539 4.672413 CAGAAGCTTTGCGACTTGTTTTAG 59.328 41.667 0.00 0.00 0.00 1.85
7003 9540 4.095782 ACAGAAGCTTTGCGACTTGTTTTA 59.904 37.500 0.00 0.00 0.00 1.52
7004 9541 3.119495 ACAGAAGCTTTGCGACTTGTTTT 60.119 39.130 0.00 0.00 0.00 2.43
7005 9542 2.423538 ACAGAAGCTTTGCGACTTGTTT 59.576 40.909 0.00 0.00 0.00 2.83
7006 9543 2.017049 ACAGAAGCTTTGCGACTTGTT 58.983 42.857 0.00 0.00 0.00 2.83
7007 9544 1.599542 GACAGAAGCTTTGCGACTTGT 59.400 47.619 0.00 0.00 0.00 3.16
7008 9545 1.869767 AGACAGAAGCTTTGCGACTTG 59.130 47.619 0.00 0.00 0.00 3.16
7074 9611 2.417097 GCCTGTTTGCAAAGCCGT 59.583 55.556 13.26 0.00 0.00 5.68
7094 9631 2.766345 ATCGTTTTGGGCCGTACTAA 57.234 45.000 0.00 0.00 0.00 2.24
7122 9662 3.901797 GAGGTCAAGGCGTGTGGGG 62.902 68.421 0.00 0.00 0.00 4.96
7200 9769 7.672983 TGATTCGAGAAGTAGCTTCATTTTT 57.327 32.000 10.91 0.00 42.37 1.94
7201 9770 7.672983 TTGATTCGAGAAGTAGCTTCATTTT 57.327 32.000 10.91 0.00 42.37 1.82
7202 9771 7.672983 TTTGATTCGAGAAGTAGCTTCATTT 57.327 32.000 10.91 0.00 42.37 2.32
7203 9772 7.672983 TTTTGATTCGAGAAGTAGCTTCATT 57.327 32.000 10.91 0.00 42.37 2.57
7204 9773 7.672983 TTTTTGATTCGAGAAGTAGCTTCAT 57.327 32.000 10.91 0.00 42.37 2.57
7205 9774 7.672983 ATTTTTGATTCGAGAAGTAGCTTCA 57.327 32.000 10.91 0.00 42.37 3.02
7207 9776 9.827411 GTTAATTTTTGATTCGAGAAGTAGCTT 57.173 29.630 0.00 0.00 0.00 3.74
7208 9777 8.169268 CGTTAATTTTTGATTCGAGAAGTAGCT 58.831 33.333 0.00 0.00 0.00 3.32
7209 9778 8.166706 TCGTTAATTTTTGATTCGAGAAGTAGC 58.833 33.333 0.00 0.00 0.00 3.58
7212 9781 8.175716 GGATCGTTAATTTTTGATTCGAGAAGT 58.824 33.333 0.00 0.00 0.00 3.01
7213 9782 7.640240 GGGATCGTTAATTTTTGATTCGAGAAG 59.360 37.037 0.00 0.00 0.00 2.85
7214 9783 7.335924 AGGGATCGTTAATTTTTGATTCGAGAA 59.664 33.333 0.00 0.00 0.00 2.87
7215 9784 6.821665 AGGGATCGTTAATTTTTGATTCGAGA 59.178 34.615 0.00 0.00 0.00 4.04
7216 9785 7.016361 AGGGATCGTTAATTTTTGATTCGAG 57.984 36.000 0.00 0.00 0.00 4.04
7217 9786 6.596106 TGAGGGATCGTTAATTTTTGATTCGA 59.404 34.615 0.00 0.00 0.00 3.71
7218 9787 6.781138 TGAGGGATCGTTAATTTTTGATTCG 58.219 36.000 0.00 0.00 0.00 3.34
7219 9788 7.067008 TCCTGAGGGATCGTTAATTTTTGATTC 59.933 37.037 0.00 0.00 36.57 2.52
7220 9789 6.889722 TCCTGAGGGATCGTTAATTTTTGATT 59.110 34.615 0.00 0.00 36.57 2.57
7221 9790 6.423182 TCCTGAGGGATCGTTAATTTTTGAT 58.577 36.000 0.00 0.00 36.57 2.57
7222 9791 5.811190 TCCTGAGGGATCGTTAATTTTTGA 58.189 37.500 0.00 0.00 36.57 2.69
7223 9792 5.880332 TCTCCTGAGGGATCGTTAATTTTTG 59.120 40.000 0.00 0.00 41.36 2.44
7224 9793 6.062258 TCTCCTGAGGGATCGTTAATTTTT 57.938 37.500 0.00 0.00 41.36 1.94
7225 9794 5.693769 TCTCCTGAGGGATCGTTAATTTT 57.306 39.130 0.00 0.00 41.36 1.82
7226 9795 5.693769 TTCTCCTGAGGGATCGTTAATTT 57.306 39.130 0.00 0.00 41.36 1.82
7227 9796 5.693769 TTTCTCCTGAGGGATCGTTAATT 57.306 39.130 0.00 0.00 41.36 1.40
7228 9797 5.693769 TTTTCTCCTGAGGGATCGTTAAT 57.306 39.130 0.00 0.00 41.36 1.40
7229 9798 5.492855 TTTTTCTCCTGAGGGATCGTTAA 57.507 39.130 0.00 0.00 41.36 2.01
7272 9841 9.884636 TTTGAAGTGTATGTTACATACTAGCAT 57.115 29.630 28.51 15.72 41.34 3.79
7273 9842 9.713713 TTTTGAAGTGTATGTTACATACTAGCA 57.286 29.630 28.51 19.93 41.34 3.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.