Multiple sequence alignment - TraesCS6B01G119200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G119200 chr6B 100.000 2290 0 0 1 2290 113985875 113988164 0.000000e+00 4229
1 TraesCS6B01G119200 chr6B 92.510 1295 73 7 423 1698 457228876 457230165 0.000000e+00 1832
2 TraesCS6B01G119200 chr6B 91.466 1289 88 13 423 1692 89607536 89606251 0.000000e+00 1751
3 TraesCS6B01G119200 chr6B 95.785 427 15 2 2 425 706701542 706701968 0.000000e+00 686
4 TraesCS6B01G119200 chr6B 95.550 427 16 2 2 425 558264341 558264767 0.000000e+00 680
5 TraesCS6B01G119200 chr2D 93.333 1290 64 7 423 1694 88299889 88301174 0.000000e+00 1886
6 TraesCS6B01G119200 chr2D 93.184 1291 66 7 423 1694 469162282 469163569 0.000000e+00 1877
7 TraesCS6B01G119200 chr3D 93.103 1305 55 6 423 1694 81833794 81835096 0.000000e+00 1879
8 TraesCS6B01G119200 chr7B 93.157 1286 69 4 423 1692 43687701 43688983 0.000000e+00 1869
9 TraesCS6B01G119200 chr7B 92.200 500 23 1 1206 1689 621906520 621907019 0.000000e+00 693
10 TraesCS6B01G119200 chr3B 92.730 1293 67 6 423 1692 804610756 804612044 0.000000e+00 1842
11 TraesCS6B01G119200 chr3B 95.381 433 17 2 1 430 541934047 541934479 0.000000e+00 686
12 TraesCS6B01G119200 chr3B 95.338 429 17 2 1 426 651733580 651733152 0.000000e+00 678
13 TraesCS6B01G119200 chr1B 92.689 1272 67 13 423 1694 155745327 155746572 0.000000e+00 1810
14 TraesCS6B01G119200 chr1B 95.571 429 16 2 1 426 261919101 261919529 0.000000e+00 684
15 TraesCS6B01G119200 chr4A 92.095 1303 70 8 423 1695 588659700 588658401 0.000000e+00 1805
16 TraesCS6B01G119200 chr7A 91.788 1303 68 10 423 1695 140768557 140767264 0.000000e+00 1777
17 TraesCS6B01G119200 chr7A 91.501 1306 74 7 423 1695 221705355 221706656 0.000000e+00 1762
18 TraesCS6B01G119200 chr6D 95.561 428 16 2 1 425 465919501 465919928 0.000000e+00 682
19 TraesCS6B01G119200 chr6D 84.887 622 53 24 1695 2290 45212662 45213268 7.050000e-165 590
20 TraesCS6B01G119200 chr5B 95.338 429 16 3 1 426 324573856 324573429 0.000000e+00 678
21 TraesCS6B01G119200 chr5B 94.919 433 19 2 1 430 307739079 307739511 0.000000e+00 675
22 TraesCS6B01G119200 chr4B 95.128 431 17 3 1 428 34401199 34401628 0.000000e+00 676
23 TraesCS6B01G119200 chr6A 83.417 398 24 14 1695 2065 59789402 59789784 4.720000e-87 331
24 TraesCS6B01G119200 chr6A 80.233 258 31 6 2051 2290 59791648 59791903 2.340000e-40 176


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G119200 chr6B 113985875 113988164 2289 False 4229.0 4229 100.000 1 2290 1 chr6B.!!$F1 2289
1 TraesCS6B01G119200 chr6B 457228876 457230165 1289 False 1832.0 1832 92.510 423 1698 1 chr6B.!!$F2 1275
2 TraesCS6B01G119200 chr6B 89606251 89607536 1285 True 1751.0 1751 91.466 423 1692 1 chr6B.!!$R1 1269
3 TraesCS6B01G119200 chr2D 88299889 88301174 1285 False 1886.0 1886 93.333 423 1694 1 chr2D.!!$F1 1271
4 TraesCS6B01G119200 chr2D 469162282 469163569 1287 False 1877.0 1877 93.184 423 1694 1 chr2D.!!$F2 1271
5 TraesCS6B01G119200 chr3D 81833794 81835096 1302 False 1879.0 1879 93.103 423 1694 1 chr3D.!!$F1 1271
6 TraesCS6B01G119200 chr7B 43687701 43688983 1282 False 1869.0 1869 93.157 423 1692 1 chr7B.!!$F1 1269
7 TraesCS6B01G119200 chr3B 804610756 804612044 1288 False 1842.0 1842 92.730 423 1692 1 chr3B.!!$F2 1269
8 TraesCS6B01G119200 chr1B 155745327 155746572 1245 False 1810.0 1810 92.689 423 1694 1 chr1B.!!$F1 1271
9 TraesCS6B01G119200 chr4A 588658401 588659700 1299 True 1805.0 1805 92.095 423 1695 1 chr4A.!!$R1 1272
10 TraesCS6B01G119200 chr7A 140767264 140768557 1293 True 1777.0 1777 91.788 423 1695 1 chr7A.!!$R1 1272
11 TraesCS6B01G119200 chr7A 221705355 221706656 1301 False 1762.0 1762 91.501 423 1695 1 chr7A.!!$F1 1272
12 TraesCS6B01G119200 chr6D 45212662 45213268 606 False 590.0 590 84.887 1695 2290 1 chr6D.!!$F1 595
13 TraesCS6B01G119200 chr6A 59789402 59791903 2501 False 253.5 331 81.825 1695 2290 2 chr6A.!!$F1 595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
367 368 0.035458 CTTCTGCTCCTCGTTGGGTT 59.965 55.0 0.0 0.0 36.2 4.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2092 4091 0.457035 ATCGTGTACGGCCGTGTTAT 59.543 50.0 40.02 21.78 40.29 1.89 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.334307 CGGATGCTTGCAATAGGGG 58.666 57.895 0.00 0.00 0.00 4.79
19 20 0.466189 CGGATGCTTGCAATAGGGGT 60.466 55.000 0.00 0.00 0.00 4.95
20 21 1.780503 GGATGCTTGCAATAGGGGTT 58.219 50.000 0.00 0.00 0.00 4.11
21 22 2.748132 CGGATGCTTGCAATAGGGGTTA 60.748 50.000 0.00 0.00 0.00 2.85
22 23 3.295973 GGATGCTTGCAATAGGGGTTAA 58.704 45.455 0.00 0.00 0.00 2.01
23 24 3.897505 GGATGCTTGCAATAGGGGTTAAT 59.102 43.478 0.00 0.00 0.00 1.40
24 25 4.021981 GGATGCTTGCAATAGGGGTTAATC 60.022 45.833 0.00 0.00 0.00 1.75
25 26 3.974719 TGCTTGCAATAGGGGTTAATCA 58.025 40.909 0.00 0.00 0.00 2.57
26 27 4.545678 TGCTTGCAATAGGGGTTAATCAT 58.454 39.130 0.00 0.00 0.00 2.45
27 28 5.700183 TGCTTGCAATAGGGGTTAATCATA 58.300 37.500 0.00 0.00 0.00 2.15
28 29 6.132658 TGCTTGCAATAGGGGTTAATCATAA 58.867 36.000 0.00 0.00 0.00 1.90
29 30 6.265196 TGCTTGCAATAGGGGTTAATCATAAG 59.735 38.462 0.00 0.00 0.00 1.73
30 31 6.265422 GCTTGCAATAGGGGTTAATCATAAGT 59.735 38.462 0.00 0.00 0.00 2.24
31 32 7.581213 TTGCAATAGGGGTTAATCATAAGTG 57.419 36.000 0.00 0.00 0.00 3.16
32 33 6.068010 TGCAATAGGGGTTAATCATAAGTGG 58.932 40.000 0.00 0.00 0.00 4.00
33 34 5.476945 GCAATAGGGGTTAATCATAAGTGGG 59.523 44.000 0.00 0.00 0.00 4.61
34 35 6.693045 GCAATAGGGGTTAATCATAAGTGGGA 60.693 42.308 0.00 0.00 0.00 4.37
35 36 7.470192 CAATAGGGGTTAATCATAAGTGGGAT 58.530 38.462 0.00 0.00 0.00 3.85
36 37 5.324832 AGGGGTTAATCATAAGTGGGATG 57.675 43.478 0.00 0.00 0.00 3.51
37 38 3.826729 GGGGTTAATCATAAGTGGGATGC 59.173 47.826 0.00 0.00 0.00 3.91
38 39 4.447762 GGGGTTAATCATAAGTGGGATGCT 60.448 45.833 0.00 0.00 0.00 3.79
39 40 5.140454 GGGTTAATCATAAGTGGGATGCTT 58.860 41.667 0.00 0.00 0.00 3.91
40 41 5.010012 GGGTTAATCATAAGTGGGATGCTTG 59.990 44.000 0.00 0.00 0.00 4.01
41 42 5.594317 GGTTAATCATAAGTGGGATGCTTGT 59.406 40.000 0.00 0.00 0.00 3.16
42 43 6.238759 GGTTAATCATAAGTGGGATGCTTGTC 60.239 42.308 0.00 0.00 0.00 3.18
43 44 3.281727 TCATAAGTGGGATGCTTGTCC 57.718 47.619 0.00 0.00 37.56 4.02
44 45 2.575735 TCATAAGTGGGATGCTTGTCCA 59.424 45.455 5.86 0.00 40.17 4.02
45 46 3.010027 TCATAAGTGGGATGCTTGTCCAA 59.990 43.478 5.86 0.00 40.17 3.53
46 47 1.915141 AAGTGGGATGCTTGTCCAAG 58.085 50.000 2.63 2.63 40.17 3.61
47 48 1.067295 AGTGGGATGCTTGTCCAAGA 58.933 50.000 11.12 0.00 40.79 3.02
48 49 1.425066 AGTGGGATGCTTGTCCAAGAA 59.575 47.619 11.12 0.22 40.79 2.52
49 50 2.158475 AGTGGGATGCTTGTCCAAGAAA 60.158 45.455 11.12 0.00 40.79 2.52
50 51 2.229784 GTGGGATGCTTGTCCAAGAAAG 59.770 50.000 11.12 0.00 40.79 2.62
51 52 1.821136 GGGATGCTTGTCCAAGAAAGG 59.179 52.381 11.12 0.00 40.79 3.11
52 53 1.821136 GGATGCTTGTCCAAGAAAGGG 59.179 52.381 11.12 0.00 40.79 3.95
53 54 1.203287 GATGCTTGTCCAAGAAAGGGC 59.797 52.381 11.12 0.00 40.79 5.19
54 55 0.106268 TGCTTGTCCAAGAAAGGGCA 60.106 50.000 11.12 0.00 42.62 5.36
55 56 0.600057 GCTTGTCCAAGAAAGGGCAG 59.400 55.000 11.12 0.00 45.41 4.85
56 57 1.986882 CTTGTCCAAGAAAGGGCAGT 58.013 50.000 0.61 0.00 45.41 4.40
57 58 2.814097 GCTTGTCCAAGAAAGGGCAGTA 60.814 50.000 11.12 0.00 45.41 2.74
58 59 2.561478 TGTCCAAGAAAGGGCAGTAC 57.439 50.000 0.00 0.00 38.62 2.73
59 60 1.073284 TGTCCAAGAAAGGGCAGTACC 59.927 52.381 0.00 0.00 38.62 3.34
68 69 2.746277 GGCAGTACCCAAGCACCG 60.746 66.667 0.00 0.00 0.00 4.94
69 70 2.746277 GCAGTACCCAAGCACCGG 60.746 66.667 0.00 0.00 0.00 5.28
70 71 2.747686 CAGTACCCAAGCACCGGT 59.252 61.111 0.00 0.00 36.08 5.28
71 72 1.375523 CAGTACCCAAGCACCGGTC 60.376 63.158 2.59 0.00 33.36 4.79
72 73 2.046604 GTACCCAAGCACCGGTCC 60.047 66.667 2.59 0.00 33.36 4.46
73 74 2.527123 TACCCAAGCACCGGTCCA 60.527 61.111 2.59 0.00 33.36 4.02
74 75 2.886134 TACCCAAGCACCGGTCCAC 61.886 63.158 2.59 0.00 33.36 4.02
77 78 4.263572 CAAGCACCGGTCCACCCA 62.264 66.667 2.59 0.00 0.00 4.51
78 79 4.265056 AAGCACCGGTCCACCCAC 62.265 66.667 2.59 0.00 0.00 4.61
80 81 4.344865 GCACCGGTCCACCCACAT 62.345 66.667 2.59 0.00 0.00 3.21
81 82 2.961893 GCACCGGTCCACCCACATA 61.962 63.158 2.59 0.00 0.00 2.29
82 83 1.912220 CACCGGTCCACCCACATAT 59.088 57.895 2.59 0.00 0.00 1.78
83 84 0.179056 CACCGGTCCACCCACATATC 60.179 60.000 2.59 0.00 0.00 1.63
84 85 0.619255 ACCGGTCCACCCACATATCA 60.619 55.000 0.00 0.00 0.00 2.15
85 86 0.544223 CCGGTCCACCCACATATCAA 59.456 55.000 0.00 0.00 0.00 2.57
86 87 1.065053 CCGGTCCACCCACATATCAAA 60.065 52.381 0.00 0.00 0.00 2.69
87 88 2.422803 CCGGTCCACCCACATATCAAAT 60.423 50.000 0.00 0.00 0.00 2.32
88 89 3.287222 CGGTCCACCCACATATCAAATT 58.713 45.455 0.00 0.00 0.00 1.82
89 90 4.456535 CGGTCCACCCACATATCAAATTA 58.543 43.478 0.00 0.00 0.00 1.40
90 91 5.070001 CGGTCCACCCACATATCAAATTAT 58.930 41.667 0.00 0.00 0.00 1.28
91 92 5.181245 CGGTCCACCCACATATCAAATTATC 59.819 44.000 0.00 0.00 0.00 1.75
92 93 6.068010 GGTCCACCCACATATCAAATTATCA 58.932 40.000 0.00 0.00 0.00 2.15
93 94 6.549364 GGTCCACCCACATATCAAATTATCAA 59.451 38.462 0.00 0.00 0.00 2.57
94 95 7.069331 GGTCCACCCACATATCAAATTATCAAA 59.931 37.037 0.00 0.00 0.00 2.69
95 96 8.137437 GTCCACCCACATATCAAATTATCAAAG 58.863 37.037 0.00 0.00 0.00 2.77
96 97 7.838696 TCCACCCACATATCAAATTATCAAAGT 59.161 33.333 0.00 0.00 0.00 2.66
97 98 9.130661 CCACCCACATATCAAATTATCAAAGTA 57.869 33.333 0.00 0.00 0.00 2.24
98 99 9.950680 CACCCACATATCAAATTATCAAAGTAC 57.049 33.333 0.00 0.00 0.00 2.73
99 100 9.131791 ACCCACATATCAAATTATCAAAGTACC 57.868 33.333 0.00 0.00 0.00 3.34
100 101 8.289618 CCCACATATCAAATTATCAAAGTACCG 58.710 37.037 0.00 0.00 0.00 4.02
101 102 9.051679 CCACATATCAAATTATCAAAGTACCGA 57.948 33.333 0.00 0.00 0.00 4.69
104 105 9.580916 CATATCAAATTATCAAAGTACCGAACG 57.419 33.333 0.00 0.00 0.00 3.95
105 106 5.860641 TCAAATTATCAAAGTACCGAACGC 58.139 37.500 0.00 0.00 0.00 4.84
106 107 5.408909 TCAAATTATCAAAGTACCGAACGCA 59.591 36.000 0.00 0.00 0.00 5.24
107 108 5.866335 AATTATCAAAGTACCGAACGCAA 57.134 34.783 0.00 0.00 0.00 4.85
108 109 5.866335 ATTATCAAAGTACCGAACGCAAA 57.134 34.783 0.00 0.00 0.00 3.68
109 110 5.866335 TTATCAAAGTACCGAACGCAAAT 57.134 34.783 0.00 0.00 0.00 2.32
110 111 3.799137 TCAAAGTACCGAACGCAAATC 57.201 42.857 0.00 0.00 0.00 2.17
111 112 3.132160 TCAAAGTACCGAACGCAAATCA 58.868 40.909 0.00 0.00 0.00 2.57
112 113 3.749088 TCAAAGTACCGAACGCAAATCAT 59.251 39.130 0.00 0.00 0.00 2.45
113 114 4.930405 TCAAAGTACCGAACGCAAATCATA 59.070 37.500 0.00 0.00 0.00 2.15
114 115 5.583061 TCAAAGTACCGAACGCAAATCATAT 59.417 36.000 0.00 0.00 0.00 1.78
115 116 5.403897 AAGTACCGAACGCAAATCATATG 57.596 39.130 0.00 0.00 0.00 1.78
116 117 4.689071 AGTACCGAACGCAAATCATATGA 58.311 39.130 8.10 8.10 0.00 2.15
117 118 4.745125 AGTACCGAACGCAAATCATATGAG 59.255 41.667 11.78 0.00 0.00 2.90
118 119 2.287915 ACCGAACGCAAATCATATGAGC 59.712 45.455 11.78 8.34 0.00 4.26
119 120 2.287644 CCGAACGCAAATCATATGAGCA 59.712 45.455 11.78 0.00 0.00 4.26
120 121 3.058708 CCGAACGCAAATCATATGAGCAT 60.059 43.478 11.78 1.54 0.00 3.79
121 122 3.904234 CGAACGCAAATCATATGAGCATG 59.096 43.478 11.78 10.50 0.00 4.06
122 123 4.318974 CGAACGCAAATCATATGAGCATGA 60.319 41.667 11.78 0.00 39.20 3.07
123 124 5.616204 CGAACGCAAATCATATGAGCATGAT 60.616 40.000 11.78 0.00 39.39 2.45
124 125 5.043189 ACGCAAATCATATGAGCATGATG 57.957 39.130 11.78 8.36 39.39 3.07
125 126 4.758165 ACGCAAATCATATGAGCATGATGA 59.242 37.500 11.78 0.00 39.39 2.92
126 127 5.239963 ACGCAAATCATATGAGCATGATGAA 59.760 36.000 11.78 0.00 39.39 2.57
127 128 6.146898 CGCAAATCATATGAGCATGATGAAA 58.853 36.000 11.78 0.00 39.39 2.69
128 129 6.087687 CGCAAATCATATGAGCATGATGAAAC 59.912 38.462 11.78 0.00 39.39 2.78
129 130 7.145985 GCAAATCATATGAGCATGATGAAACT 58.854 34.615 11.78 0.00 39.39 2.66
130 131 8.294577 GCAAATCATATGAGCATGATGAAACTA 58.705 33.333 11.78 0.00 39.39 2.24
131 132 9.827411 CAAATCATATGAGCATGATGAAACTAG 57.173 33.333 11.78 0.00 39.39 2.57
132 133 7.612668 ATCATATGAGCATGATGAAACTAGC 57.387 36.000 11.78 0.00 39.39 3.42
133 134 6.766429 TCATATGAGCATGATGAAACTAGCT 58.234 36.000 0.00 0.00 29.93 3.32
134 135 7.222161 TCATATGAGCATGATGAAACTAGCTT 58.778 34.615 0.00 0.00 29.93 3.74
135 136 5.752892 ATGAGCATGATGAAACTAGCTTG 57.247 39.130 0.00 0.00 31.61 4.01
136 137 4.835678 TGAGCATGATGAAACTAGCTTGA 58.164 39.130 1.04 0.00 31.61 3.02
137 138 4.633126 TGAGCATGATGAAACTAGCTTGAC 59.367 41.667 1.04 0.00 31.61 3.18
138 139 3.620374 AGCATGATGAAACTAGCTTGACG 59.380 43.478 1.04 0.00 0.00 4.35
139 140 3.618594 GCATGATGAAACTAGCTTGACGA 59.381 43.478 1.04 0.00 0.00 4.20
140 141 4.272018 GCATGATGAAACTAGCTTGACGAT 59.728 41.667 1.04 0.00 0.00 3.73
141 142 5.463392 GCATGATGAAACTAGCTTGACGATA 59.537 40.000 1.04 0.00 0.00 2.92
142 143 6.018751 GCATGATGAAACTAGCTTGACGATAA 60.019 38.462 1.04 0.00 0.00 1.75
143 144 7.307632 GCATGATGAAACTAGCTTGACGATAAT 60.308 37.037 1.04 0.00 0.00 1.28
144 145 8.554528 CATGATGAAACTAGCTTGACGATAATT 58.445 33.333 1.04 0.00 0.00 1.40
145 146 8.131455 TGATGAAACTAGCTTGACGATAATTC 57.869 34.615 1.04 0.00 0.00 2.17
146 147 6.903883 TGAAACTAGCTTGACGATAATTCC 57.096 37.500 1.04 0.00 0.00 3.01
147 148 5.815740 TGAAACTAGCTTGACGATAATTCCC 59.184 40.000 1.04 0.00 0.00 3.97
148 149 5.353394 AACTAGCTTGACGATAATTCCCA 57.647 39.130 1.04 0.00 0.00 4.37
149 150 5.552870 ACTAGCTTGACGATAATTCCCAT 57.447 39.130 1.04 0.00 0.00 4.00
150 151 5.300752 ACTAGCTTGACGATAATTCCCATG 58.699 41.667 1.04 0.00 0.00 3.66
151 152 4.156455 AGCTTGACGATAATTCCCATGT 57.844 40.909 0.00 0.00 0.00 3.21
152 153 3.879295 AGCTTGACGATAATTCCCATGTG 59.121 43.478 0.00 0.00 0.00 3.21
153 154 3.627577 GCTTGACGATAATTCCCATGTGT 59.372 43.478 0.00 0.00 0.00 3.72
154 155 4.260784 GCTTGACGATAATTCCCATGTGTC 60.261 45.833 0.00 0.00 0.00 3.67
155 156 3.804036 TGACGATAATTCCCATGTGTCC 58.196 45.455 0.00 0.00 0.00 4.02
156 157 3.454447 TGACGATAATTCCCATGTGTCCT 59.546 43.478 0.00 0.00 0.00 3.85
157 158 4.058817 GACGATAATTCCCATGTGTCCTC 58.941 47.826 0.00 0.00 0.00 3.71
158 159 3.059884 CGATAATTCCCATGTGTCCTCG 58.940 50.000 0.00 0.00 0.00 4.63
159 160 3.403038 GATAATTCCCATGTGTCCTCGG 58.597 50.000 0.00 0.00 0.00 4.63
160 161 0.255890 AATTCCCATGTGTCCTCGGG 59.744 55.000 0.00 0.00 40.32 5.14
161 162 0.620410 ATTCCCATGTGTCCTCGGGA 60.620 55.000 0.00 0.00 46.19 5.14
162 163 1.685765 TCCCATGTGTCCTCGGGAG 60.686 63.158 0.00 0.00 42.94 4.30
163 164 2.187946 CCATGTGTCCTCGGGAGC 59.812 66.667 0.00 0.00 29.39 4.70
164 165 2.202797 CATGTGTCCTCGGGAGCG 60.203 66.667 0.00 0.00 29.39 5.03
165 166 4.148825 ATGTGTCCTCGGGAGCGC 62.149 66.667 0.00 0.00 29.39 5.92
167 168 4.070552 GTGTCCTCGGGAGCGCTT 62.071 66.667 13.26 0.00 29.39 4.68
168 169 3.311110 TGTCCTCGGGAGCGCTTT 61.311 61.111 13.26 0.00 29.39 3.51
169 170 2.047179 GTCCTCGGGAGCGCTTTT 60.047 61.111 13.26 0.00 29.39 2.27
170 171 2.101233 GTCCTCGGGAGCGCTTTTC 61.101 63.158 13.26 4.41 29.39 2.29
171 172 2.266055 CCTCGGGAGCGCTTTTCT 59.734 61.111 13.26 0.00 0.00 2.52
172 173 1.811679 CCTCGGGAGCGCTTTTCTC 60.812 63.158 13.26 0.00 0.00 2.87
173 174 1.079819 CTCGGGAGCGCTTTTCTCA 60.080 57.895 13.26 0.00 32.38 3.27
174 175 0.460987 CTCGGGAGCGCTTTTCTCAT 60.461 55.000 13.26 0.00 32.38 2.90
175 176 0.036388 TCGGGAGCGCTTTTCTCATT 60.036 50.000 13.26 0.00 32.38 2.57
176 177 1.206132 TCGGGAGCGCTTTTCTCATTA 59.794 47.619 13.26 0.00 32.38 1.90
177 178 2.158957 TCGGGAGCGCTTTTCTCATTAT 60.159 45.455 13.26 0.00 32.38 1.28
178 179 3.069016 TCGGGAGCGCTTTTCTCATTATA 59.931 43.478 13.26 0.00 32.38 0.98
179 180 3.807622 CGGGAGCGCTTTTCTCATTATAA 59.192 43.478 13.26 0.00 32.38 0.98
180 181 4.084328 CGGGAGCGCTTTTCTCATTATAAG 60.084 45.833 13.26 0.00 32.38 1.73
181 182 5.057149 GGGAGCGCTTTTCTCATTATAAGA 58.943 41.667 13.26 0.00 32.38 2.10
182 183 5.527582 GGGAGCGCTTTTCTCATTATAAGAA 59.472 40.000 13.26 0.00 32.38 2.52
183 184 6.038271 GGGAGCGCTTTTCTCATTATAAGAAA 59.962 38.462 13.26 0.00 40.14 2.52
184 185 7.255277 GGGAGCGCTTTTCTCATTATAAGAAAT 60.255 37.037 13.26 0.00 41.15 2.17
185 186 8.131731 GGAGCGCTTTTCTCATTATAAGAAATT 58.868 33.333 13.26 0.00 41.15 1.82
186 187 8.847444 AGCGCTTTTCTCATTATAAGAAATTG 57.153 30.769 2.64 0.00 41.15 2.32
187 188 8.462016 AGCGCTTTTCTCATTATAAGAAATTGT 58.538 29.630 2.64 0.00 41.15 2.71
188 189 8.737648 GCGCTTTTCTCATTATAAGAAATTGTC 58.262 33.333 0.00 0.00 41.15 3.18
189 190 9.226345 CGCTTTTCTCATTATAAGAAATTGTCC 57.774 33.333 0.00 0.00 41.15 4.02
193 194 7.807977 TCTCATTATAAGAAATTGTCCAGGC 57.192 36.000 0.00 0.00 0.00 4.85
194 195 7.577303 TCTCATTATAAGAAATTGTCCAGGCT 58.423 34.615 0.00 0.00 0.00 4.58
195 196 8.055181 TCTCATTATAAGAAATTGTCCAGGCTT 58.945 33.333 0.00 0.00 0.00 4.35
196 197 7.999679 TCATTATAAGAAATTGTCCAGGCTTG 58.000 34.615 0.00 0.00 0.00 4.01
197 198 7.615365 TCATTATAAGAAATTGTCCAGGCTTGT 59.385 33.333 0.00 0.00 0.00 3.16
198 199 5.904362 ATAAGAAATTGTCCAGGCTTGTC 57.096 39.130 0.00 0.00 0.00 3.18
199 200 2.519013 AGAAATTGTCCAGGCTTGTCC 58.481 47.619 0.00 0.00 0.00 4.02
201 202 2.683211 AATTGTCCAGGCTTGTCCTT 57.317 45.000 0.00 0.00 44.75 3.36
202 203 2.683211 ATTGTCCAGGCTTGTCCTTT 57.317 45.000 0.00 0.00 44.75 3.11
203 204 1.691196 TTGTCCAGGCTTGTCCTTTG 58.309 50.000 0.00 0.00 44.75 2.77
204 205 0.823356 TGTCCAGGCTTGTCCTTTGC 60.823 55.000 0.00 0.00 44.75 3.68
205 206 0.538287 GTCCAGGCTTGTCCTTTGCT 60.538 55.000 0.00 0.00 44.75 3.91
206 207 1.064003 TCCAGGCTTGTCCTTTGCTA 58.936 50.000 0.00 0.00 44.75 3.49
207 208 1.168714 CCAGGCTTGTCCTTTGCTAC 58.831 55.000 0.00 0.00 44.75 3.58
208 209 1.545428 CCAGGCTTGTCCTTTGCTACA 60.545 52.381 0.00 0.00 44.75 2.74
209 210 2.229792 CAGGCTTGTCCTTTGCTACAA 58.770 47.619 0.00 0.00 44.75 2.41
210 211 2.622942 CAGGCTTGTCCTTTGCTACAAA 59.377 45.455 0.00 0.00 44.75 2.83
211 212 3.068024 CAGGCTTGTCCTTTGCTACAAAA 59.932 43.478 0.00 0.00 44.75 2.44
212 213 3.704061 AGGCTTGTCCTTTGCTACAAAAA 59.296 39.130 0.00 0.00 44.75 1.94
213 214 4.051237 GGCTTGTCCTTTGCTACAAAAAG 58.949 43.478 0.00 0.00 35.32 2.27
214 215 4.441495 GGCTTGTCCTTTGCTACAAAAAGT 60.441 41.667 0.00 0.00 35.32 2.66
215 216 5.221165 GGCTTGTCCTTTGCTACAAAAAGTA 60.221 40.000 0.00 0.00 35.32 2.24
216 217 6.447162 GCTTGTCCTTTGCTACAAAAAGTAT 58.553 36.000 0.00 0.00 35.32 2.12
217 218 6.923508 GCTTGTCCTTTGCTACAAAAAGTATT 59.076 34.615 0.00 0.00 35.32 1.89
218 219 7.096065 GCTTGTCCTTTGCTACAAAAAGTATTG 60.096 37.037 0.00 0.00 35.32 1.90
219 220 6.744112 TGTCCTTTGCTACAAAAAGTATTGG 58.256 36.000 0.00 0.00 33.61 3.16
220 221 6.156519 GTCCTTTGCTACAAAAAGTATTGGG 58.843 40.000 0.00 0.00 33.61 4.12
221 222 5.836358 TCCTTTGCTACAAAAAGTATTGGGT 59.164 36.000 0.00 0.00 33.61 4.51
222 223 6.015772 TCCTTTGCTACAAAAAGTATTGGGTC 60.016 38.462 0.00 0.00 33.61 4.46
223 224 6.239176 CCTTTGCTACAAAAAGTATTGGGTCA 60.239 38.462 0.00 0.00 33.61 4.02
224 225 5.699097 TGCTACAAAAAGTATTGGGTCAC 57.301 39.130 0.00 0.00 34.56 3.67
225 226 4.521256 TGCTACAAAAAGTATTGGGTCACC 59.479 41.667 0.00 0.00 34.56 4.02
226 227 4.765339 GCTACAAAAAGTATTGGGTCACCT 59.235 41.667 0.00 0.00 34.56 4.00
227 228 5.243060 GCTACAAAAAGTATTGGGTCACCTT 59.757 40.000 0.00 0.00 34.56 3.50
228 229 5.529581 ACAAAAAGTATTGGGTCACCTTG 57.470 39.130 0.00 0.00 37.76 3.61
229 230 4.959839 ACAAAAAGTATTGGGTCACCTTGT 59.040 37.500 0.00 0.00 37.76 3.16
230 231 5.423931 ACAAAAAGTATTGGGTCACCTTGTT 59.576 36.000 0.00 0.00 37.76 2.83
231 232 5.529581 AAAAGTATTGGGTCACCTTGTTG 57.470 39.130 0.00 0.00 37.76 3.33
232 233 3.876309 AGTATTGGGTCACCTTGTTGT 57.124 42.857 0.00 0.00 37.76 3.32
233 234 4.986054 AGTATTGGGTCACCTTGTTGTA 57.014 40.909 0.00 0.00 37.76 2.41
234 235 4.648651 AGTATTGGGTCACCTTGTTGTAC 58.351 43.478 0.00 0.00 37.76 2.90
235 236 2.351706 TTGGGTCACCTTGTTGTACC 57.648 50.000 0.00 0.00 37.76 3.34
236 237 1.513858 TGGGTCACCTTGTTGTACCT 58.486 50.000 0.00 0.00 37.76 3.08
237 238 1.847737 TGGGTCACCTTGTTGTACCTT 59.152 47.619 0.00 0.00 37.76 3.50
238 239 3.047115 TGGGTCACCTTGTTGTACCTTA 58.953 45.455 0.00 0.00 37.76 2.69
239 240 3.653836 TGGGTCACCTTGTTGTACCTTAT 59.346 43.478 0.00 0.00 37.76 1.73
240 241 4.105057 TGGGTCACCTTGTTGTACCTTATT 59.895 41.667 0.00 0.00 37.76 1.40
241 242 5.074804 GGGTCACCTTGTTGTACCTTATTT 58.925 41.667 0.00 0.00 0.00 1.40
242 243 6.183361 TGGGTCACCTTGTTGTACCTTATTTA 60.183 38.462 0.00 0.00 37.76 1.40
243 244 6.149973 GGGTCACCTTGTTGTACCTTATTTAC 59.850 42.308 0.00 0.00 0.00 2.01
244 245 6.938596 GGTCACCTTGTTGTACCTTATTTACT 59.061 38.462 0.00 0.00 0.00 2.24
245 246 7.446319 GGTCACCTTGTTGTACCTTATTTACTT 59.554 37.037 0.00 0.00 0.00 2.24
246 247 8.843262 GTCACCTTGTTGTACCTTATTTACTTT 58.157 33.333 0.00 0.00 0.00 2.66
247 248 9.059260 TCACCTTGTTGTACCTTATTTACTTTC 57.941 33.333 0.00 0.00 0.00 2.62
248 249 8.842280 CACCTTGTTGTACCTTATTTACTTTCA 58.158 33.333 0.00 0.00 0.00 2.69
249 250 9.582648 ACCTTGTTGTACCTTATTTACTTTCAT 57.417 29.630 0.00 0.00 0.00 2.57
252 253 9.685828 TTGTTGTACCTTATTTACTTTCATTGC 57.314 29.630 0.00 0.00 0.00 3.56
253 254 9.073475 TGTTGTACCTTATTTACTTTCATTGCT 57.927 29.630 0.00 0.00 0.00 3.91
254 255 9.908152 GTTGTACCTTATTTACTTTCATTGCTT 57.092 29.630 0.00 0.00 0.00 3.91
255 256 9.906660 TTGTACCTTATTTACTTTCATTGCTTG 57.093 29.630 0.00 0.00 0.00 4.01
256 257 9.073475 TGTACCTTATTTACTTTCATTGCTTGT 57.927 29.630 0.00 0.00 0.00 3.16
257 258 9.908152 GTACCTTATTTACTTTCATTGCTTGTT 57.092 29.630 0.00 0.00 0.00 2.83
259 260 9.908152 ACCTTATTTACTTTCATTGCTTGTTAC 57.092 29.630 0.00 0.00 0.00 2.50
260 261 9.353999 CCTTATTTACTTTCATTGCTTGTTACC 57.646 33.333 0.00 0.00 0.00 2.85
261 262 9.353999 CTTATTTACTTTCATTGCTTGTTACCC 57.646 33.333 0.00 0.00 0.00 3.69
262 263 6.716934 TTTACTTTCATTGCTTGTTACCCA 57.283 33.333 0.00 0.00 0.00 4.51
263 264 6.909550 TTACTTTCATTGCTTGTTACCCAT 57.090 33.333 0.00 0.00 0.00 4.00
264 265 5.806654 ACTTTCATTGCTTGTTACCCATT 57.193 34.783 0.00 0.00 0.00 3.16
265 266 6.909550 ACTTTCATTGCTTGTTACCCATTA 57.090 33.333 0.00 0.00 0.00 1.90
266 267 6.687604 ACTTTCATTGCTTGTTACCCATTAC 58.312 36.000 0.00 0.00 0.00 1.89
267 268 6.266558 ACTTTCATTGCTTGTTACCCATTACA 59.733 34.615 0.00 0.00 0.00 2.41
268 269 6.656632 TTCATTGCTTGTTACCCATTACAA 57.343 33.333 0.00 0.00 33.54 2.41
269 270 6.656632 TCATTGCTTGTTACCCATTACAAA 57.343 33.333 0.00 0.00 34.17 2.83
270 271 7.238486 TCATTGCTTGTTACCCATTACAAAT 57.762 32.000 0.00 0.00 34.17 2.32
271 272 7.675062 TCATTGCTTGTTACCCATTACAAATT 58.325 30.769 0.00 0.00 34.17 1.82
272 273 8.807118 TCATTGCTTGTTACCCATTACAAATTA 58.193 29.630 0.00 0.00 34.17 1.40
273 274 9.598517 CATTGCTTGTTACCCATTACAAATTAT 57.401 29.630 0.00 0.00 34.17 1.28
274 275 9.816354 ATTGCTTGTTACCCATTACAAATTATC 57.184 29.630 0.00 0.00 34.17 1.75
275 276 8.588290 TGCTTGTTACCCATTACAAATTATCT 57.412 30.769 0.00 0.00 34.17 1.98
276 277 9.030452 TGCTTGTTACCCATTACAAATTATCTT 57.970 29.630 0.00 0.00 34.17 2.40
277 278 9.516314 GCTTGTTACCCATTACAAATTATCTTC 57.484 33.333 0.00 0.00 34.17 2.87
280 281 9.521841 TGTTACCCATTACAAATTATCTTCACA 57.478 29.630 0.00 0.00 0.00 3.58
284 285 9.705290 ACCCATTACAAATTATCTTCACAAAAC 57.295 29.630 0.00 0.00 0.00 2.43
285 286 9.927668 CCCATTACAAATTATCTTCACAAAACT 57.072 29.630 0.00 0.00 0.00 2.66
305 306 9.906660 CAAAACTATTTGCTACCTACAATTTCA 57.093 29.630 0.00 0.00 39.50 2.69
307 308 8.863872 AACTATTTGCTACCTACAATTTCAGT 57.136 30.769 0.00 0.00 0.00 3.41
308 309 8.268850 ACTATTTGCTACCTACAATTTCAGTG 57.731 34.615 0.00 0.00 0.00 3.66
309 310 5.371115 TTTGCTACCTACAATTTCAGTGC 57.629 39.130 0.00 0.00 0.00 4.40
310 311 4.286297 TGCTACCTACAATTTCAGTGCT 57.714 40.909 0.00 0.00 0.00 4.40
311 312 4.651778 TGCTACCTACAATTTCAGTGCTT 58.348 39.130 0.00 0.00 0.00 3.91
312 313 4.455533 TGCTACCTACAATTTCAGTGCTTG 59.544 41.667 0.00 0.00 0.00 4.01
313 314 3.923017 ACCTACAATTTCAGTGCTTGC 57.077 42.857 0.00 0.00 0.00 4.01
314 315 3.221771 ACCTACAATTTCAGTGCTTGCA 58.778 40.909 0.00 0.00 0.00 4.08
315 316 3.254166 ACCTACAATTTCAGTGCTTGCAG 59.746 43.478 0.00 0.00 0.00 4.41
316 317 3.503363 CCTACAATTTCAGTGCTTGCAGA 59.497 43.478 0.00 0.00 0.00 4.26
317 318 3.637998 ACAATTTCAGTGCTTGCAGAG 57.362 42.857 0.00 0.00 0.00 3.35
318 319 3.216800 ACAATTTCAGTGCTTGCAGAGA 58.783 40.909 0.00 0.00 0.00 3.10
319 320 3.633525 ACAATTTCAGTGCTTGCAGAGAA 59.366 39.130 0.00 0.75 0.00 2.87
320 321 4.280174 ACAATTTCAGTGCTTGCAGAGAAT 59.720 37.500 9.42 1.04 0.00 2.40
321 322 5.474532 ACAATTTCAGTGCTTGCAGAGAATA 59.525 36.000 9.42 3.86 0.00 1.75
322 323 5.557891 ATTTCAGTGCTTGCAGAGAATAC 57.442 39.130 9.42 0.00 0.00 1.89
323 324 2.977914 TCAGTGCTTGCAGAGAATACC 58.022 47.619 0.00 0.00 0.00 2.73
324 325 2.568956 TCAGTGCTTGCAGAGAATACCT 59.431 45.455 0.00 0.00 0.00 3.08
325 326 3.008375 TCAGTGCTTGCAGAGAATACCTT 59.992 43.478 0.00 0.00 0.00 3.50
326 327 4.222810 TCAGTGCTTGCAGAGAATACCTTA 59.777 41.667 0.00 0.00 0.00 2.69
327 328 4.331168 CAGTGCTTGCAGAGAATACCTTAC 59.669 45.833 0.00 0.00 0.00 2.34
328 329 4.223923 AGTGCTTGCAGAGAATACCTTACT 59.776 41.667 0.00 0.00 0.00 2.24
329 330 4.331168 GTGCTTGCAGAGAATACCTTACTG 59.669 45.833 0.00 0.00 0.00 2.74
330 331 4.222810 TGCTTGCAGAGAATACCTTACTGA 59.777 41.667 0.00 0.00 0.00 3.41
331 332 5.178797 GCTTGCAGAGAATACCTTACTGAA 58.821 41.667 0.00 0.00 0.00 3.02
332 333 5.643777 GCTTGCAGAGAATACCTTACTGAAA 59.356 40.000 0.00 0.00 0.00 2.69
333 334 6.149474 GCTTGCAGAGAATACCTTACTGAAAA 59.851 38.462 0.00 0.00 0.00 2.29
334 335 7.435068 TTGCAGAGAATACCTTACTGAAAAC 57.565 36.000 0.00 0.00 0.00 2.43
335 336 6.769512 TGCAGAGAATACCTTACTGAAAACT 58.230 36.000 0.00 0.00 0.00 2.66
336 337 6.650807 TGCAGAGAATACCTTACTGAAAACTG 59.349 38.462 0.00 0.00 0.00 3.16
337 338 6.402658 GCAGAGAATACCTTACTGAAAACTGC 60.403 42.308 0.00 0.00 37.81 4.40
338 339 6.876257 CAGAGAATACCTTACTGAAAACTGCT 59.124 38.462 0.00 0.00 0.00 4.24
339 340 7.389053 CAGAGAATACCTTACTGAAAACTGCTT 59.611 37.037 0.00 0.00 0.00 3.91
340 341 7.389053 AGAGAATACCTTACTGAAAACTGCTTG 59.611 37.037 0.00 0.00 0.00 4.01
341 342 6.998673 AGAATACCTTACTGAAAACTGCTTGT 59.001 34.615 0.00 0.00 0.00 3.16
342 343 6.803154 ATACCTTACTGAAAACTGCTTGTC 57.197 37.500 0.00 0.00 0.00 3.18
343 344 4.523083 ACCTTACTGAAAACTGCTTGTCA 58.477 39.130 0.00 0.00 0.00 3.58
344 345 5.133221 ACCTTACTGAAAACTGCTTGTCAT 58.867 37.500 0.00 0.00 0.00 3.06
345 346 5.594317 ACCTTACTGAAAACTGCTTGTCATT 59.406 36.000 0.00 0.00 0.00 2.57
346 347 6.096846 ACCTTACTGAAAACTGCTTGTCATTT 59.903 34.615 0.00 0.00 0.00 2.32
347 348 6.638468 CCTTACTGAAAACTGCTTGTCATTTC 59.362 38.462 0.00 0.00 0.00 2.17
348 349 4.936891 ACTGAAAACTGCTTGTCATTTCC 58.063 39.130 0.00 0.00 29.07 3.13
349 350 4.646492 ACTGAAAACTGCTTGTCATTTCCT 59.354 37.500 0.00 0.00 29.07 3.36
350 351 5.127682 ACTGAAAACTGCTTGTCATTTCCTT 59.872 36.000 0.00 0.00 29.07 3.36
351 352 5.591099 TGAAAACTGCTTGTCATTTCCTTC 58.409 37.500 0.00 0.00 29.07 3.46
352 353 5.360714 TGAAAACTGCTTGTCATTTCCTTCT 59.639 36.000 0.00 0.00 29.07 2.85
353 354 4.843220 AACTGCTTGTCATTTCCTTCTG 57.157 40.909 0.00 0.00 0.00 3.02
354 355 2.555757 ACTGCTTGTCATTTCCTTCTGC 59.444 45.455 0.00 0.00 0.00 4.26
355 356 2.818432 CTGCTTGTCATTTCCTTCTGCT 59.182 45.455 0.00 0.00 0.00 4.24
356 357 2.816087 TGCTTGTCATTTCCTTCTGCTC 59.184 45.455 0.00 0.00 0.00 4.26
357 358 2.163211 GCTTGTCATTTCCTTCTGCTCC 59.837 50.000 0.00 0.00 0.00 4.70
358 359 3.683802 CTTGTCATTTCCTTCTGCTCCT 58.316 45.455 0.00 0.00 0.00 3.69
359 360 3.340814 TGTCATTTCCTTCTGCTCCTC 57.659 47.619 0.00 0.00 0.00 3.71
360 361 2.275318 GTCATTTCCTTCTGCTCCTCG 58.725 52.381 0.00 0.00 0.00 4.63
361 362 1.902508 TCATTTCCTTCTGCTCCTCGT 59.097 47.619 0.00 0.00 0.00 4.18
362 363 2.303022 TCATTTCCTTCTGCTCCTCGTT 59.697 45.455 0.00 0.00 0.00 3.85
363 364 2.169832 TTTCCTTCTGCTCCTCGTTG 57.830 50.000 0.00 0.00 0.00 4.10
364 365 0.321671 TTCCTTCTGCTCCTCGTTGG 59.678 55.000 0.00 0.00 37.10 3.77
365 366 1.078848 CCTTCTGCTCCTCGTTGGG 60.079 63.158 0.00 0.00 36.20 4.12
366 367 1.674057 CTTCTGCTCCTCGTTGGGT 59.326 57.895 0.00 0.00 36.20 4.51
367 368 0.035458 CTTCTGCTCCTCGTTGGGTT 59.965 55.000 0.00 0.00 36.20 4.11
368 369 0.472471 TTCTGCTCCTCGTTGGGTTT 59.528 50.000 0.00 0.00 36.20 3.27
369 370 0.250295 TCTGCTCCTCGTTGGGTTTG 60.250 55.000 0.00 0.00 36.20 2.93
370 371 0.250295 CTGCTCCTCGTTGGGTTTGA 60.250 55.000 0.00 0.00 36.20 2.69
371 372 0.534203 TGCTCCTCGTTGGGTTTGAC 60.534 55.000 0.00 0.00 36.20 3.18
372 373 0.534203 GCTCCTCGTTGGGTTTGACA 60.534 55.000 0.00 0.00 36.20 3.58
373 374 1.226746 CTCCTCGTTGGGTTTGACAC 58.773 55.000 0.00 0.00 36.20 3.67
374 375 0.834612 TCCTCGTTGGGTTTGACACT 59.165 50.000 0.00 0.00 36.20 3.55
375 376 1.202604 TCCTCGTTGGGTTTGACACTC 60.203 52.381 0.00 0.00 36.20 3.51
376 377 1.202651 CCTCGTTGGGTTTGACACTCT 60.203 52.381 0.00 0.00 0.00 3.24
377 378 2.561569 CTCGTTGGGTTTGACACTCTT 58.438 47.619 0.00 0.00 0.00 2.85
378 379 3.493699 CCTCGTTGGGTTTGACACTCTTA 60.494 47.826 0.00 0.00 0.00 2.10
379 380 3.460103 TCGTTGGGTTTGACACTCTTAC 58.540 45.455 0.00 0.00 0.00 2.34
380 381 3.133362 TCGTTGGGTTTGACACTCTTACT 59.867 43.478 0.00 0.00 0.00 2.24
381 382 3.875134 CGTTGGGTTTGACACTCTTACTT 59.125 43.478 0.00 0.00 0.00 2.24
382 383 5.051816 CGTTGGGTTTGACACTCTTACTTA 58.948 41.667 0.00 0.00 0.00 2.24
383 384 5.699458 CGTTGGGTTTGACACTCTTACTTAT 59.301 40.000 0.00 0.00 0.00 1.73
384 385 6.128634 CGTTGGGTTTGACACTCTTACTTATC 60.129 42.308 0.00 0.00 0.00 1.75
385 386 5.475719 TGGGTTTGACACTCTTACTTATCG 58.524 41.667 0.00 0.00 0.00 2.92
386 387 5.244402 TGGGTTTGACACTCTTACTTATCGA 59.756 40.000 0.00 0.00 0.00 3.59
387 388 6.161381 GGGTTTGACACTCTTACTTATCGAA 58.839 40.000 0.00 0.00 0.00 3.71
388 389 6.647895 GGGTTTGACACTCTTACTTATCGAAA 59.352 38.462 0.00 0.00 0.00 3.46
389 390 7.359849 GGGTTTGACACTCTTACTTATCGAAAC 60.360 40.741 0.00 0.00 0.00 2.78
390 391 7.359849 GGTTTGACACTCTTACTTATCGAAACC 60.360 40.741 0.00 0.00 32.98 3.27
391 392 6.335471 TGACACTCTTACTTATCGAAACCA 57.665 37.500 0.00 0.00 0.00 3.67
392 393 6.154445 TGACACTCTTACTTATCGAAACCAC 58.846 40.000 0.00 0.00 0.00 4.16
393 394 6.015688 TGACACTCTTACTTATCGAAACCACT 60.016 38.462 0.00 0.00 0.00 4.00
394 395 7.175467 TGACACTCTTACTTATCGAAACCACTA 59.825 37.037 0.00 0.00 0.00 2.74
395 396 8.064336 ACACTCTTACTTATCGAAACCACTAT 57.936 34.615 0.00 0.00 0.00 2.12
396 397 7.974501 ACACTCTTACTTATCGAAACCACTATG 59.025 37.037 0.00 0.00 0.00 2.23
397 398 8.188799 CACTCTTACTTATCGAAACCACTATGA 58.811 37.037 0.00 0.00 0.00 2.15
398 399 8.915036 ACTCTTACTTATCGAAACCACTATGAT 58.085 33.333 0.00 0.00 0.00 2.45
404 405 9.303116 ACTTATCGAAACCACTATGATAGATCT 57.697 33.333 6.45 0.00 0.00 2.75
405 406 9.781834 CTTATCGAAACCACTATGATAGATCTC 57.218 37.037 6.45 0.00 0.00 2.75
406 407 6.576662 TCGAAACCACTATGATAGATCTCC 57.423 41.667 6.45 0.00 0.00 3.71
407 408 6.307776 TCGAAACCACTATGATAGATCTCCT 58.692 40.000 6.45 0.00 0.00 3.69
408 409 7.459234 TCGAAACCACTATGATAGATCTCCTA 58.541 38.462 6.45 0.00 0.00 2.94
409 410 8.110271 TCGAAACCACTATGATAGATCTCCTAT 58.890 37.037 6.45 0.00 40.66 2.57
410 411 9.397280 CGAAACCACTATGATAGATCTCCTATA 57.603 37.037 6.45 0.00 38.17 1.31
414 415 9.693739 ACCACTATGATAGATCTCCTATACTTG 57.306 37.037 6.45 0.00 38.17 3.16
415 416 9.693739 CCACTATGATAGATCTCCTATACTTGT 57.306 37.037 6.45 0.00 38.17 3.16
417 418 9.693739 ACTATGATAGATCTCCTATACTTGTGG 57.306 37.037 6.45 0.00 38.17 4.17
418 419 7.969690 ATGATAGATCTCCTATACTTGTGGG 57.030 40.000 0.00 0.00 38.17 4.61
419 420 6.864421 TGATAGATCTCCTATACTTGTGGGT 58.136 40.000 0.00 0.00 38.17 4.51
420 421 6.948886 TGATAGATCTCCTATACTTGTGGGTC 59.051 42.308 0.00 0.00 38.17 4.46
421 422 5.144159 AGATCTCCTATACTTGTGGGTCA 57.856 43.478 0.00 0.00 0.00 4.02
443 444 4.301505 GCATGGAGCCGAAGTTCA 57.698 55.556 3.32 0.00 37.23 3.18
475 476 3.384467 CCATGGTGTTCTCAAACTTGGTT 59.616 43.478 2.57 0.00 36.30 3.67
514 515 1.697291 CCTAGGAAGAAGGCCCTCCAT 60.697 57.143 1.05 0.00 34.11 3.41
540 541 2.478803 CCCAAGGGAAGGGGTTGGT 61.479 63.158 0.00 0.00 42.90 3.67
550 551 1.152546 GGGGTTGGTGTTGGAGCTT 60.153 57.895 0.00 0.00 0.00 3.74
633 637 1.737199 AAGTAGTGTTGGGCAGGGTA 58.263 50.000 0.00 0.00 0.00 3.69
646 650 5.478844 TGGGCAGGGTAAGTAAATATAGGA 58.521 41.667 0.00 0.00 0.00 2.94
649 653 5.012768 GGCAGGGTAAGTAAATATAGGAGCA 59.987 44.000 0.00 0.00 0.00 4.26
681 685 2.028658 GGAGAAGAGTGACAGTCATGCA 60.029 50.000 6.51 0.00 0.00 3.96
717 721 5.744171 TGCTCTTCAATAAGCCATGAACTA 58.256 37.500 0.00 0.00 37.73 2.24
718 722 6.359804 TGCTCTTCAATAAGCCATGAACTAT 58.640 36.000 0.00 0.00 37.73 2.12
719 723 6.261603 TGCTCTTCAATAAGCCATGAACTATG 59.738 38.462 0.00 0.00 37.73 2.23
724 730 8.800370 TTCAATAAGCCATGAACTATGTGTTA 57.200 30.769 0.00 0.00 39.30 2.41
757 763 1.733912 TGAATTGTGTGCAGATCGAGC 59.266 47.619 6.28 6.28 0.00 5.03
779 797 2.124570 CAATGAGGTGCTCCCGGG 60.125 66.667 16.85 16.85 38.74 5.73
802 820 0.395586 TGACAACAAGGGCAAGCAGT 60.396 50.000 0.00 0.00 0.00 4.40
823 841 1.002134 CTTCACCCAATGCCCGACT 60.002 57.895 0.00 0.00 0.00 4.18
868 886 1.318158 GGAAGACCCGAAGACGCCTA 61.318 60.000 0.00 0.00 38.29 3.93
939 963 1.563924 ACTACGGCCACTACCATCAA 58.436 50.000 2.24 0.00 0.00 2.57
984 1010 0.620556 AGGTCATCCTTGCACCGAAT 59.379 50.000 0.00 0.00 42.12 3.34
1014 1040 2.043652 CCCATGCCCCTGGACTTG 60.044 66.667 0.00 0.00 38.69 3.16
1074 1100 1.598130 GAACAACACCGGCTGCTCT 60.598 57.895 0.00 0.00 0.00 4.09
1161 1187 4.569966 GCAGTCGTTCATCAGATCAAGATT 59.430 41.667 0.00 0.00 0.00 2.40
1236 1262 3.726291 TCTTCGACGATGATGGCATTA 57.274 42.857 9.19 0.00 34.11 1.90
1253 1279 3.250040 GCATTAAGGTCGTCAACAAGTGT 59.750 43.478 0.00 0.00 0.00 3.55
1321 1347 5.623169 CCTCCCTAAGTACTATCGAGTCTT 58.377 45.833 0.00 0.00 37.10 3.01
1602 1697 1.219646 GCAACCAAACAACATGCAGG 58.780 50.000 0.00 0.00 37.00 4.85
1717 1813 4.417506 CAATCAATTGTGATGCGTGATGT 58.582 39.130 5.13 0.00 44.02 3.06
1747 1843 7.039882 TCCACATCCTAAACTAGATCGTTTTC 58.960 38.462 0.00 0.00 38.08 2.29
1770 1867 1.112113 TGCGGGATCCTGAACTAGAC 58.888 55.000 25.54 4.95 0.00 2.59
1850 1949 0.182061 GAAGGGAGCAGATGCATCCA 59.818 55.000 23.06 0.00 45.16 3.41
1855 1954 2.039480 GGGAGCAGATGCATCCAGAATA 59.961 50.000 23.06 0.00 45.16 1.75
1876 1975 9.512588 AGAATATTGTTGGAGCATTTCCTATAG 57.487 33.333 0.00 0.00 46.92 1.31
1895 1994 3.334583 AGTACGGATGCAGACACAAAT 57.665 42.857 0.00 0.00 0.00 2.32
1897 1996 4.827692 AGTACGGATGCAGACACAAATTA 58.172 39.130 0.00 0.00 0.00 1.40
1906 2005 3.793801 GCAGACACAAATTAAACACGGCA 60.794 43.478 0.00 0.00 0.00 5.69
1946 2045 2.102070 TAAATGGTCGCAATCGGTGT 57.898 45.000 0.00 0.00 36.13 4.16
1950 2049 0.108992 TGGTCGCAATCGGTGTCTAC 60.109 55.000 0.00 0.00 36.13 2.59
1951 2050 0.108992 GGTCGCAATCGGTGTCTACA 60.109 55.000 0.00 0.00 36.13 2.74
1952 2051 1.470979 GGTCGCAATCGGTGTCTACAT 60.471 52.381 0.00 0.00 36.13 2.29
1953 2052 1.588404 GTCGCAATCGGTGTCTACATG 59.412 52.381 0.00 0.00 36.13 3.21
1954 2053 1.203758 TCGCAATCGGTGTCTACATGT 59.796 47.619 2.69 2.69 36.13 3.21
1966 2086 7.012138 TCGGTGTCTACATGTATCTCTTAGAAC 59.988 40.741 5.91 2.18 0.00 3.01
1968 2088 8.347035 GGTGTCTACATGTATCTCTTAGAACTC 58.653 40.741 5.91 0.00 0.00 3.01
2017 2140 8.641499 TTTTGGTGTGTATGTTTTCTGATTTC 57.359 30.769 0.00 0.00 0.00 2.17
2092 4091 5.453903 CCAATAAACATCAACAAACCCCACA 60.454 40.000 0.00 0.00 0.00 4.17
2093 4092 6.229733 CAATAAACATCAACAAACCCCACAT 58.770 36.000 0.00 0.00 0.00 3.21
2111 4110 0.457035 ATAACACGGCCGTACACGAT 59.543 50.000 33.70 15.95 43.02 3.73
2113 4112 0.179156 AACACGGCCGTACACGATAG 60.179 55.000 33.70 18.64 43.02 2.08
2115 4114 2.117156 ACGGCCGTACACGATAGCT 61.117 57.895 33.34 0.00 43.02 3.32
2123 4122 3.558829 CCGTACACGATAGCTAGTCAGAA 59.441 47.826 2.76 0.00 43.02 3.02
2132 4131 3.669251 AGCTAGTCAGAACAACTCCAC 57.331 47.619 0.00 0.00 0.00 4.02
2155 4154 2.689083 CCGACACAAACTGTCTGCA 58.311 52.632 0.00 0.00 46.50 4.41
2225 4241 0.604511 CCAAACCTAAACCGCGTCCT 60.605 55.000 4.92 0.00 0.00 3.85
2230 4246 0.245539 CCTAAACCGCGTCCTCTCAA 59.754 55.000 4.92 0.00 0.00 3.02
2235 4251 1.251527 ACCGCGTCCTCTCAATGTCT 61.252 55.000 4.92 0.00 0.00 3.41
2243 4259 4.035091 CGTCCTCTCAATGTCTGTCTAGAG 59.965 50.000 0.00 0.00 32.48 2.43
2252 4268 4.890158 TGTCTGTCTAGAGGCATTTCAA 57.110 40.909 0.00 0.00 32.48 2.69
2265 4281 4.322567 GGCATTTCAAGCCCAAATTTGTA 58.677 39.130 16.73 0.00 46.50 2.41
2266 4282 4.759183 GGCATTTCAAGCCCAAATTTGTAA 59.241 37.500 16.73 0.00 46.50 2.41
2267 4283 5.106594 GGCATTTCAAGCCCAAATTTGTAAG 60.107 40.000 16.73 6.59 46.50 2.34
2274 4290 7.430441 TCAAGCCCAAATTTGTAAGTAGTTTC 58.570 34.615 16.73 0.00 0.00 2.78
2276 4292 6.075315 AGCCCAAATTTGTAAGTAGTTTCCT 58.925 36.000 16.73 0.00 0.00 3.36
2277 4293 6.208797 AGCCCAAATTTGTAAGTAGTTTCCTC 59.791 38.462 16.73 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.466189 ACCCCTATTGCAAGCATCCG 60.466 55.000 4.94 0.00 0.00 4.18
1 2 1.780503 AACCCCTATTGCAAGCATCC 58.219 50.000 4.94 0.00 0.00 3.51
2 3 4.584325 TGATTAACCCCTATTGCAAGCATC 59.416 41.667 4.94 0.00 0.00 3.91
3 4 4.545678 TGATTAACCCCTATTGCAAGCAT 58.454 39.130 4.94 0.00 0.00 3.79
4 5 3.974719 TGATTAACCCCTATTGCAAGCA 58.025 40.909 4.94 0.00 0.00 3.91
5 6 6.265422 ACTTATGATTAACCCCTATTGCAAGC 59.735 38.462 4.94 0.00 0.00 4.01
6 7 7.255590 CCACTTATGATTAACCCCTATTGCAAG 60.256 40.741 4.94 0.00 0.00 4.01
7 8 6.549364 CCACTTATGATTAACCCCTATTGCAA 59.451 38.462 0.00 0.00 0.00 4.08
8 9 6.068010 CCACTTATGATTAACCCCTATTGCA 58.932 40.000 0.00 0.00 0.00 4.08
9 10 5.476945 CCCACTTATGATTAACCCCTATTGC 59.523 44.000 0.00 0.00 0.00 3.56
10 11 6.848069 TCCCACTTATGATTAACCCCTATTG 58.152 40.000 0.00 0.00 0.00 1.90
11 12 7.470192 CATCCCACTTATGATTAACCCCTATT 58.530 38.462 0.00 0.00 0.00 1.73
12 13 6.524192 GCATCCCACTTATGATTAACCCCTAT 60.524 42.308 0.00 0.00 0.00 2.57
13 14 5.222048 GCATCCCACTTATGATTAACCCCTA 60.222 44.000 0.00 0.00 0.00 3.53
14 15 4.447762 GCATCCCACTTATGATTAACCCCT 60.448 45.833 0.00 0.00 0.00 4.79
15 16 3.826729 GCATCCCACTTATGATTAACCCC 59.173 47.826 0.00 0.00 0.00 4.95
16 17 4.729868 AGCATCCCACTTATGATTAACCC 58.270 43.478 0.00 0.00 0.00 4.11
17 18 5.594317 ACAAGCATCCCACTTATGATTAACC 59.406 40.000 0.00 0.00 31.55 2.85
18 19 6.238759 GGACAAGCATCCCACTTATGATTAAC 60.239 42.308 0.00 0.00 31.55 2.01
19 20 5.827797 GGACAAGCATCCCACTTATGATTAA 59.172 40.000 0.00 0.00 31.55 1.40
20 21 5.104151 TGGACAAGCATCCCACTTATGATTA 60.104 40.000 0.00 0.00 38.06 1.75
21 22 4.210331 GGACAAGCATCCCACTTATGATT 58.790 43.478 0.00 0.00 33.44 2.57
22 23 3.202818 TGGACAAGCATCCCACTTATGAT 59.797 43.478 0.00 0.00 38.06 2.45
23 24 2.575735 TGGACAAGCATCCCACTTATGA 59.424 45.455 0.00 0.00 38.06 2.15
24 25 3.003394 TGGACAAGCATCCCACTTATG 57.997 47.619 0.00 0.00 38.06 1.90
25 26 3.266772 TCTTGGACAAGCATCCCACTTAT 59.733 43.478 7.18 0.00 38.06 1.73
26 27 2.642311 TCTTGGACAAGCATCCCACTTA 59.358 45.455 7.18 0.00 38.06 2.24
27 28 1.425066 TCTTGGACAAGCATCCCACTT 59.575 47.619 7.18 0.00 38.06 3.16
28 29 1.067295 TCTTGGACAAGCATCCCACT 58.933 50.000 7.18 0.00 38.06 4.00
29 30 1.909700 TTCTTGGACAAGCATCCCAC 58.090 50.000 7.18 0.00 38.06 4.61
30 31 2.517959 CTTTCTTGGACAAGCATCCCA 58.482 47.619 7.18 0.00 38.06 4.37
31 32 1.821136 CCTTTCTTGGACAAGCATCCC 59.179 52.381 7.18 0.00 38.06 3.85
32 33 1.821136 CCCTTTCTTGGACAAGCATCC 59.179 52.381 7.18 0.00 38.28 3.51
33 34 1.203287 GCCCTTTCTTGGACAAGCATC 59.797 52.381 7.18 0.00 38.28 3.91
34 35 1.260544 GCCCTTTCTTGGACAAGCAT 58.739 50.000 7.18 0.00 38.28 3.79
35 36 0.106268 TGCCCTTTCTTGGACAAGCA 60.106 50.000 7.18 0.00 38.28 3.91
36 37 0.600057 CTGCCCTTTCTTGGACAAGC 59.400 55.000 7.18 0.00 38.28 4.01
37 38 1.986882 ACTGCCCTTTCTTGGACAAG 58.013 50.000 5.72 5.72 39.71 3.16
38 39 2.488347 GGTACTGCCCTTTCTTGGACAA 60.488 50.000 0.00 0.00 0.00 3.18
39 40 1.073284 GGTACTGCCCTTTCTTGGACA 59.927 52.381 0.00 0.00 0.00 4.02
40 41 1.822506 GGTACTGCCCTTTCTTGGAC 58.177 55.000 0.00 0.00 0.00 4.02
51 52 2.746277 CGGTGCTTGGGTACTGCC 60.746 66.667 0.00 0.00 0.00 4.85
52 53 2.746277 CCGGTGCTTGGGTACTGC 60.746 66.667 0.00 0.00 33.91 4.40
53 54 1.375523 GACCGGTGCTTGGGTACTG 60.376 63.158 14.63 0.00 36.46 2.74
54 55 2.590114 GGACCGGTGCTTGGGTACT 61.590 63.158 20.19 0.00 36.46 2.73
55 56 2.046604 GGACCGGTGCTTGGGTAC 60.047 66.667 20.19 0.00 36.46 3.34
56 57 2.527123 TGGACCGGTGCTTGGGTA 60.527 61.111 27.28 2.05 36.46 3.69
57 58 4.265056 GTGGACCGGTGCTTGGGT 62.265 66.667 27.28 0.00 39.83 4.51
60 61 4.263572 TGGGTGGACCGGTGCTTG 62.264 66.667 27.28 0.00 44.64 4.01
61 62 4.265056 GTGGGTGGACCGGTGCTT 62.265 66.667 27.28 0.00 44.64 3.91
63 64 2.265467 ATATGTGGGTGGACCGGTGC 62.265 60.000 20.69 20.69 44.64 5.01
64 65 0.179056 GATATGTGGGTGGACCGGTG 60.179 60.000 14.63 0.00 44.64 4.94
65 66 0.619255 TGATATGTGGGTGGACCGGT 60.619 55.000 6.92 6.92 44.64 5.28
66 67 0.544223 TTGATATGTGGGTGGACCGG 59.456 55.000 0.00 0.00 44.64 5.28
67 68 2.411628 TTTGATATGTGGGTGGACCG 57.588 50.000 0.00 0.00 44.64 4.79
68 69 6.068010 TGATAATTTGATATGTGGGTGGACC 58.932 40.000 0.00 0.00 40.81 4.46
69 70 7.581213 TTGATAATTTGATATGTGGGTGGAC 57.419 36.000 0.00 0.00 0.00 4.02
70 71 7.838696 ACTTTGATAATTTGATATGTGGGTGGA 59.161 33.333 0.00 0.00 0.00 4.02
71 72 8.010733 ACTTTGATAATTTGATATGTGGGTGG 57.989 34.615 0.00 0.00 0.00 4.61
72 73 9.950680 GTACTTTGATAATTTGATATGTGGGTG 57.049 33.333 0.00 0.00 0.00 4.61
73 74 9.131791 GGTACTTTGATAATTTGATATGTGGGT 57.868 33.333 0.00 0.00 0.00 4.51
74 75 8.289618 CGGTACTTTGATAATTTGATATGTGGG 58.710 37.037 0.00 0.00 0.00 4.61
75 76 9.051679 TCGGTACTTTGATAATTTGATATGTGG 57.948 33.333 0.00 0.00 0.00 4.17
78 79 9.580916 CGTTCGGTACTTTGATAATTTGATATG 57.419 33.333 0.00 0.00 0.00 1.78
79 80 8.280497 GCGTTCGGTACTTTGATAATTTGATAT 58.720 33.333 0.00 0.00 0.00 1.63
80 81 7.278203 TGCGTTCGGTACTTTGATAATTTGATA 59.722 33.333 0.00 0.00 0.00 2.15
81 82 6.092944 TGCGTTCGGTACTTTGATAATTTGAT 59.907 34.615 0.00 0.00 0.00 2.57
82 83 5.408909 TGCGTTCGGTACTTTGATAATTTGA 59.591 36.000 0.00 0.00 0.00 2.69
83 84 5.623335 TGCGTTCGGTACTTTGATAATTTG 58.377 37.500 0.00 0.00 0.00 2.32
84 85 5.866335 TGCGTTCGGTACTTTGATAATTT 57.134 34.783 0.00 0.00 0.00 1.82
85 86 5.866335 TTGCGTTCGGTACTTTGATAATT 57.134 34.783 0.00 0.00 0.00 1.40
86 87 5.866335 TTTGCGTTCGGTACTTTGATAAT 57.134 34.783 0.00 0.00 0.00 1.28
87 88 5.408909 TGATTTGCGTTCGGTACTTTGATAA 59.591 36.000 0.00 0.00 0.00 1.75
88 89 4.930405 TGATTTGCGTTCGGTACTTTGATA 59.070 37.500 0.00 0.00 0.00 2.15
89 90 3.749088 TGATTTGCGTTCGGTACTTTGAT 59.251 39.130 0.00 0.00 0.00 2.57
90 91 3.132160 TGATTTGCGTTCGGTACTTTGA 58.868 40.909 0.00 0.00 0.00 2.69
91 92 3.529634 TGATTTGCGTTCGGTACTTTG 57.470 42.857 0.00 0.00 0.00 2.77
92 93 5.583061 TCATATGATTTGCGTTCGGTACTTT 59.417 36.000 0.00 0.00 0.00 2.66
93 94 5.113383 TCATATGATTTGCGTTCGGTACTT 58.887 37.500 0.00 0.00 0.00 2.24
94 95 4.689071 TCATATGATTTGCGTTCGGTACT 58.311 39.130 0.00 0.00 0.00 2.73
95 96 4.608445 GCTCATATGATTTGCGTTCGGTAC 60.608 45.833 5.72 0.00 0.00 3.34
96 97 3.493129 GCTCATATGATTTGCGTTCGGTA 59.507 43.478 5.72 0.00 0.00 4.02
97 98 2.287915 GCTCATATGATTTGCGTTCGGT 59.712 45.455 5.72 0.00 0.00 4.69
98 99 2.287644 TGCTCATATGATTTGCGTTCGG 59.712 45.455 5.72 0.00 0.00 4.30
99 100 3.590720 TGCTCATATGATTTGCGTTCG 57.409 42.857 5.72 0.00 0.00 3.95
100 101 5.099484 TCATGCTCATATGATTTGCGTTC 57.901 39.130 5.72 0.00 32.39 3.95
101 102 5.239963 TCATCATGCTCATATGATTTGCGTT 59.760 36.000 5.72 0.00 43.41 4.84
102 103 4.758165 TCATCATGCTCATATGATTTGCGT 59.242 37.500 5.72 5.13 43.41 5.24
103 104 5.291293 TCATCATGCTCATATGATTTGCG 57.709 39.130 5.72 0.00 43.41 4.85
104 105 7.145985 AGTTTCATCATGCTCATATGATTTGC 58.854 34.615 5.72 7.17 43.41 3.68
105 106 9.827411 CTAGTTTCATCATGCTCATATGATTTG 57.173 33.333 5.72 4.79 43.41 2.32
106 107 8.512956 GCTAGTTTCATCATGCTCATATGATTT 58.487 33.333 5.72 0.00 43.41 2.17
107 108 7.883833 AGCTAGTTTCATCATGCTCATATGATT 59.116 33.333 5.72 0.00 43.41 2.57
108 109 7.395617 AGCTAGTTTCATCATGCTCATATGAT 58.604 34.615 5.72 0.00 46.02 2.45
109 110 6.766429 AGCTAGTTTCATCATGCTCATATGA 58.234 36.000 5.07 5.07 41.00 2.15
110 111 7.172703 TCAAGCTAGTTTCATCATGCTCATATG 59.827 37.037 0.00 0.00 0.00 1.78
111 112 7.172875 GTCAAGCTAGTTTCATCATGCTCATAT 59.827 37.037 0.00 0.00 0.00 1.78
112 113 6.481313 GTCAAGCTAGTTTCATCATGCTCATA 59.519 38.462 0.00 0.00 0.00 2.15
113 114 5.296283 GTCAAGCTAGTTTCATCATGCTCAT 59.704 40.000 0.00 0.00 0.00 2.90
114 115 4.633126 GTCAAGCTAGTTTCATCATGCTCA 59.367 41.667 0.00 0.00 0.00 4.26
115 116 4.260132 CGTCAAGCTAGTTTCATCATGCTC 60.260 45.833 0.00 0.00 0.00 4.26
116 117 3.620374 CGTCAAGCTAGTTTCATCATGCT 59.380 43.478 0.00 0.00 0.00 3.79
117 118 3.618594 TCGTCAAGCTAGTTTCATCATGC 59.381 43.478 0.00 0.00 0.00 4.06
118 119 5.980698 ATCGTCAAGCTAGTTTCATCATG 57.019 39.130 0.00 0.00 0.00 3.07
119 120 8.668510 AATTATCGTCAAGCTAGTTTCATCAT 57.331 30.769 0.00 0.00 0.00 2.45
120 121 7.224753 GGAATTATCGTCAAGCTAGTTTCATCA 59.775 37.037 0.00 0.00 0.00 3.07
121 122 7.307455 GGGAATTATCGTCAAGCTAGTTTCATC 60.307 40.741 0.00 0.00 0.00 2.92
122 123 6.483640 GGGAATTATCGTCAAGCTAGTTTCAT 59.516 38.462 0.00 0.00 0.00 2.57
123 124 5.815740 GGGAATTATCGTCAAGCTAGTTTCA 59.184 40.000 0.00 0.00 0.00 2.69
124 125 5.815740 TGGGAATTATCGTCAAGCTAGTTTC 59.184 40.000 0.00 0.00 0.00 2.78
125 126 5.741011 TGGGAATTATCGTCAAGCTAGTTT 58.259 37.500 0.00 0.00 0.00 2.66
126 127 5.353394 TGGGAATTATCGTCAAGCTAGTT 57.647 39.130 0.00 0.00 0.00 2.24
127 128 5.163301 ACATGGGAATTATCGTCAAGCTAGT 60.163 40.000 0.00 0.00 0.00 2.57
128 129 5.178252 CACATGGGAATTATCGTCAAGCTAG 59.822 44.000 0.00 0.00 0.00 3.42
129 130 5.056480 CACATGGGAATTATCGTCAAGCTA 58.944 41.667 0.00 0.00 0.00 3.32
130 131 3.879295 CACATGGGAATTATCGTCAAGCT 59.121 43.478 0.00 0.00 0.00 3.74
131 132 3.627577 ACACATGGGAATTATCGTCAAGC 59.372 43.478 0.00 0.00 0.00 4.01
132 133 4.273480 GGACACATGGGAATTATCGTCAAG 59.727 45.833 0.00 0.00 0.00 3.02
133 134 4.080582 AGGACACATGGGAATTATCGTCAA 60.081 41.667 0.00 0.00 0.00 3.18
134 135 3.454447 AGGACACATGGGAATTATCGTCA 59.546 43.478 0.00 0.00 0.00 4.35
135 136 4.058817 GAGGACACATGGGAATTATCGTC 58.941 47.826 0.00 0.00 0.00 4.20
136 137 3.492656 CGAGGACACATGGGAATTATCGT 60.493 47.826 0.00 0.00 0.00 3.73
137 138 3.059884 CGAGGACACATGGGAATTATCG 58.940 50.000 0.00 0.00 0.00 2.92
138 139 3.403038 CCGAGGACACATGGGAATTATC 58.597 50.000 0.00 0.00 0.00 1.75
139 140 2.106511 CCCGAGGACACATGGGAATTAT 59.893 50.000 0.00 0.00 44.88 1.28
140 141 1.488812 CCCGAGGACACATGGGAATTA 59.511 52.381 0.00 0.00 44.88 1.40
141 142 0.255890 CCCGAGGACACATGGGAATT 59.744 55.000 0.00 0.00 44.88 2.17
142 143 1.915228 CCCGAGGACACATGGGAAT 59.085 57.895 0.00 0.00 44.88 3.01
143 144 3.399046 CCCGAGGACACATGGGAA 58.601 61.111 0.00 0.00 44.88 3.97
145 146 2.903357 CTCCCGAGGACACATGGG 59.097 66.667 0.00 0.00 43.36 4.00
146 147 2.187946 GCTCCCGAGGACACATGG 59.812 66.667 0.00 0.00 0.00 3.66
147 148 2.202797 CGCTCCCGAGGACACATG 60.203 66.667 0.00 0.00 36.29 3.21
148 149 4.148825 GCGCTCCCGAGGACACAT 62.149 66.667 0.00 0.00 36.29 3.21
150 151 3.591254 AAAGCGCTCCCGAGGACAC 62.591 63.158 12.06 0.00 36.29 3.67
151 152 2.781595 GAAAAGCGCTCCCGAGGACA 62.782 60.000 12.06 0.00 36.29 4.02
152 153 2.047179 AAAAGCGCTCCCGAGGAC 60.047 61.111 12.06 0.00 36.29 3.85
153 154 2.227089 GAGAAAAGCGCTCCCGAGGA 62.227 60.000 12.06 0.00 36.29 3.71
154 155 1.811679 GAGAAAAGCGCTCCCGAGG 60.812 63.158 12.06 0.00 36.29 4.63
155 156 0.460987 ATGAGAAAAGCGCTCCCGAG 60.461 55.000 12.06 0.00 36.29 4.63
156 157 0.036388 AATGAGAAAAGCGCTCCCGA 60.036 50.000 12.06 0.00 36.29 5.14
157 158 1.651987 TAATGAGAAAAGCGCTCCCG 58.348 50.000 12.06 0.00 37.57 5.14
158 159 5.057149 TCTTATAATGAGAAAAGCGCTCCC 58.943 41.667 12.06 2.48 0.00 4.30
159 160 6.604735 TTCTTATAATGAGAAAAGCGCTCC 57.395 37.500 12.06 2.91 30.60 4.70
160 161 8.951969 CAATTTCTTATAATGAGAAAAGCGCTC 58.048 33.333 12.06 0.00 43.87 5.03
161 162 8.462016 ACAATTTCTTATAATGAGAAAAGCGCT 58.538 29.630 2.64 2.64 43.87 5.92
162 163 8.620533 ACAATTTCTTATAATGAGAAAAGCGC 57.379 30.769 0.00 0.00 43.87 5.92
163 164 9.226345 GGACAATTTCTTATAATGAGAAAAGCG 57.774 33.333 7.38 3.12 43.87 4.68
167 168 8.686334 GCCTGGACAATTTCTTATAATGAGAAA 58.314 33.333 0.00 6.04 44.53 2.52
168 169 8.055181 AGCCTGGACAATTTCTTATAATGAGAA 58.945 33.333 0.00 0.00 0.00 2.87
169 170 7.577303 AGCCTGGACAATTTCTTATAATGAGA 58.423 34.615 0.00 0.00 0.00 3.27
170 171 7.814264 AGCCTGGACAATTTCTTATAATGAG 57.186 36.000 0.00 0.00 0.00 2.90
171 172 7.615365 ACAAGCCTGGACAATTTCTTATAATGA 59.385 33.333 0.00 0.00 0.00 2.57
172 173 7.775120 ACAAGCCTGGACAATTTCTTATAATG 58.225 34.615 0.00 0.00 0.00 1.90
173 174 7.068716 GGACAAGCCTGGACAATTTCTTATAAT 59.931 37.037 0.00 0.00 0.00 1.28
174 175 6.377146 GGACAAGCCTGGACAATTTCTTATAA 59.623 38.462 0.00 0.00 0.00 0.98
175 176 5.885912 GGACAAGCCTGGACAATTTCTTATA 59.114 40.000 0.00 0.00 0.00 0.98
176 177 4.706962 GGACAAGCCTGGACAATTTCTTAT 59.293 41.667 0.00 0.00 0.00 1.73
177 178 4.079253 GGACAAGCCTGGACAATTTCTTA 58.921 43.478 0.00 0.00 0.00 2.10
178 179 2.893489 GGACAAGCCTGGACAATTTCTT 59.107 45.455 0.00 0.00 0.00 2.52
179 180 2.519013 GGACAAGCCTGGACAATTTCT 58.481 47.619 0.00 0.00 0.00 2.52
190 191 8.611732 ATACTTTTTGTAGCAAAGGACAAGCCT 61.612 37.037 0.00 0.00 41.07 4.58
191 192 3.726291 TTTTGTAGCAAAGGACAAGCC 57.274 42.857 0.00 0.00 36.92 4.35
192 193 4.682787 ACTTTTTGTAGCAAAGGACAAGC 58.317 39.130 0.00 0.00 36.92 4.01
193 194 7.382218 CCAATACTTTTTGTAGCAAAGGACAAG 59.618 37.037 0.00 0.00 36.92 3.16
194 195 7.206687 CCAATACTTTTTGTAGCAAAGGACAA 58.793 34.615 0.00 0.00 35.82 3.18
195 196 6.239176 CCCAATACTTTTTGTAGCAAAGGACA 60.239 38.462 0.00 0.00 35.82 4.02
196 197 6.156519 CCCAATACTTTTTGTAGCAAAGGAC 58.843 40.000 0.00 0.00 35.82 3.85
197 198 5.836358 ACCCAATACTTTTTGTAGCAAAGGA 59.164 36.000 0.00 0.00 35.82 3.36
198 199 6.096673 ACCCAATACTTTTTGTAGCAAAGG 57.903 37.500 0.00 0.00 35.82 3.11
199 200 6.640907 GTGACCCAATACTTTTTGTAGCAAAG 59.359 38.462 0.00 0.00 37.29 2.77
200 201 6.461788 GGTGACCCAATACTTTTTGTAGCAAA 60.462 38.462 0.00 0.00 34.24 3.68
201 202 5.010213 GGTGACCCAATACTTTTTGTAGCAA 59.990 40.000 0.00 0.00 34.24 3.91
202 203 4.521256 GGTGACCCAATACTTTTTGTAGCA 59.479 41.667 0.00 0.00 34.24 3.49
203 204 4.765339 AGGTGACCCAATACTTTTTGTAGC 59.235 41.667 0.00 0.00 34.24 3.58
204 205 6.264518 ACAAGGTGACCCAATACTTTTTGTAG 59.735 38.462 0.00 0.00 34.24 2.74
205 206 6.130569 ACAAGGTGACCCAATACTTTTTGTA 58.869 36.000 0.00 0.00 35.37 2.41
206 207 4.959839 ACAAGGTGACCCAATACTTTTTGT 59.040 37.500 0.00 0.00 0.00 2.83
207 208 5.529581 ACAAGGTGACCCAATACTTTTTG 57.470 39.130 0.00 0.00 0.00 2.44
208 209 5.423931 ACAACAAGGTGACCCAATACTTTTT 59.576 36.000 0.00 0.00 0.00 1.94
209 210 4.959839 ACAACAAGGTGACCCAATACTTTT 59.040 37.500 0.00 0.00 0.00 2.27
210 211 4.542697 ACAACAAGGTGACCCAATACTTT 58.457 39.130 0.00 0.00 0.00 2.66
211 212 4.178956 ACAACAAGGTGACCCAATACTT 57.821 40.909 0.00 0.00 0.00 2.24
212 213 3.876309 ACAACAAGGTGACCCAATACT 57.124 42.857 0.00 0.00 0.00 2.12
213 214 3.754850 GGTACAACAAGGTGACCCAATAC 59.245 47.826 0.00 0.00 0.00 1.89
214 215 3.653836 AGGTACAACAAGGTGACCCAATA 59.346 43.478 0.00 0.00 0.00 1.90
215 216 2.445525 AGGTACAACAAGGTGACCCAAT 59.554 45.455 0.00 0.00 0.00 3.16
216 217 1.847737 AGGTACAACAAGGTGACCCAA 59.152 47.619 0.00 0.00 0.00 4.12
217 218 1.513858 AGGTACAACAAGGTGACCCA 58.486 50.000 0.00 0.00 0.00 4.51
218 219 2.651382 AAGGTACAACAAGGTGACCC 57.349 50.000 0.00 0.00 0.00 4.46
219 220 6.938596 AGTAAATAAGGTACAACAAGGTGACC 59.061 38.462 0.00 0.00 0.00 4.02
220 221 7.974482 AGTAAATAAGGTACAACAAGGTGAC 57.026 36.000 0.00 0.00 0.00 3.67
221 222 8.983702 AAAGTAAATAAGGTACAACAAGGTGA 57.016 30.769 0.00 0.00 0.00 4.02
222 223 8.842280 TGAAAGTAAATAAGGTACAACAAGGTG 58.158 33.333 0.00 0.00 0.00 4.00
223 224 8.983702 TGAAAGTAAATAAGGTACAACAAGGT 57.016 30.769 0.00 0.00 0.00 3.50
226 227 9.685828 GCAATGAAAGTAAATAAGGTACAACAA 57.314 29.630 0.00 0.00 0.00 2.83
227 228 9.073475 AGCAATGAAAGTAAATAAGGTACAACA 57.927 29.630 0.00 0.00 0.00 3.33
228 229 9.908152 AAGCAATGAAAGTAAATAAGGTACAAC 57.092 29.630 0.00 0.00 0.00 3.32
229 230 9.906660 CAAGCAATGAAAGTAAATAAGGTACAA 57.093 29.630 0.00 0.00 0.00 2.41
230 231 9.073475 ACAAGCAATGAAAGTAAATAAGGTACA 57.927 29.630 0.00 0.00 0.00 2.90
231 232 9.908152 AACAAGCAATGAAAGTAAATAAGGTAC 57.092 29.630 0.00 0.00 0.00 3.34
233 234 9.908152 GTAACAAGCAATGAAAGTAAATAAGGT 57.092 29.630 0.00 0.00 0.00 3.50
234 235 9.353999 GGTAACAAGCAATGAAAGTAAATAAGG 57.646 33.333 0.00 0.00 0.00 2.69
235 236 9.353999 GGGTAACAAGCAATGAAAGTAAATAAG 57.646 33.333 0.00 0.00 39.74 1.73
236 237 8.861086 TGGGTAACAAGCAATGAAAGTAAATAA 58.139 29.630 0.00 0.00 39.74 1.40
237 238 8.410673 TGGGTAACAAGCAATGAAAGTAAATA 57.589 30.769 0.00 0.00 39.74 1.40
238 239 7.296628 TGGGTAACAAGCAATGAAAGTAAAT 57.703 32.000 0.00 0.00 39.74 1.40
239 240 6.716934 TGGGTAACAAGCAATGAAAGTAAA 57.283 33.333 0.00 0.00 39.74 2.01
240 241 6.909550 ATGGGTAACAAGCAATGAAAGTAA 57.090 33.333 0.00 0.00 39.74 2.24
241 242 6.909550 AATGGGTAACAAGCAATGAAAGTA 57.090 33.333 0.00 0.00 39.74 2.24
242 243 5.806654 AATGGGTAACAAGCAATGAAAGT 57.193 34.783 0.00 0.00 39.74 2.66
243 244 6.686630 TGTAATGGGTAACAAGCAATGAAAG 58.313 36.000 0.00 0.00 39.74 2.62
244 245 6.656632 TGTAATGGGTAACAAGCAATGAAA 57.343 33.333 0.00 0.00 39.74 2.69
245 246 6.656632 TTGTAATGGGTAACAAGCAATGAA 57.343 33.333 0.00 0.00 39.74 2.57
246 247 6.656632 TTTGTAATGGGTAACAAGCAATGA 57.343 33.333 0.00 0.00 36.96 2.57
247 248 7.903995 AATTTGTAATGGGTAACAAGCAATG 57.096 32.000 0.00 0.00 36.96 2.82
248 249 9.816354 GATAATTTGTAATGGGTAACAAGCAAT 57.184 29.630 0.00 0.00 36.96 3.56
249 250 9.030452 AGATAATTTGTAATGGGTAACAAGCAA 57.970 29.630 0.00 0.00 36.96 3.91
250 251 8.588290 AGATAATTTGTAATGGGTAACAAGCA 57.412 30.769 0.00 0.00 36.96 3.91
251 252 9.516314 GAAGATAATTTGTAATGGGTAACAAGC 57.484 33.333 0.00 0.00 36.96 4.01
254 255 9.521841 TGTGAAGATAATTTGTAATGGGTAACA 57.478 29.630 0.00 0.00 39.74 2.41
258 259 9.705290 GTTTTGTGAAGATAATTTGTAATGGGT 57.295 29.630 0.00 0.00 0.00 4.51
259 260 9.927668 AGTTTTGTGAAGATAATTTGTAATGGG 57.072 29.630 0.00 0.00 0.00 4.00
270 271 9.515226 AGGTAGCAAATAGTTTTGTGAAGATAA 57.485 29.630 0.00 0.00 43.43 1.75
272 273 8.947115 GTAGGTAGCAAATAGTTTTGTGAAGAT 58.053 33.333 0.00 0.00 43.43 2.40
273 274 7.934665 TGTAGGTAGCAAATAGTTTTGTGAAGA 59.065 33.333 0.00 0.00 43.43 2.87
274 275 8.094798 TGTAGGTAGCAAATAGTTTTGTGAAG 57.905 34.615 0.00 0.00 43.43 3.02
275 276 8.453238 TTGTAGGTAGCAAATAGTTTTGTGAA 57.547 30.769 0.00 0.00 43.43 3.18
276 277 8.630054 ATTGTAGGTAGCAAATAGTTTTGTGA 57.370 30.769 0.00 0.00 43.43 3.58
277 278 9.691362 AAATTGTAGGTAGCAAATAGTTTTGTG 57.309 29.630 0.00 0.00 43.43 3.33
278 279 9.908152 GAAATTGTAGGTAGCAAATAGTTTTGT 57.092 29.630 0.00 0.00 43.43 2.83
279 280 9.906660 TGAAATTGTAGGTAGCAAATAGTTTTG 57.093 29.630 0.00 0.00 44.18 2.44
281 282 9.297037 ACTGAAATTGTAGGTAGCAAATAGTTT 57.703 29.630 0.00 0.00 0.00 2.66
282 283 8.730680 CACTGAAATTGTAGGTAGCAAATAGTT 58.269 33.333 0.00 0.00 0.00 2.24
283 284 7.148239 GCACTGAAATTGTAGGTAGCAAATAGT 60.148 37.037 0.00 0.00 0.00 2.12
284 285 7.066284 AGCACTGAAATTGTAGGTAGCAAATAG 59.934 37.037 0.00 0.00 0.00 1.73
285 286 6.884295 AGCACTGAAATTGTAGGTAGCAAATA 59.116 34.615 0.00 0.00 0.00 1.40
286 287 5.711976 AGCACTGAAATTGTAGGTAGCAAAT 59.288 36.000 0.00 0.00 0.00 2.32
287 288 5.070001 AGCACTGAAATTGTAGGTAGCAAA 58.930 37.500 0.00 0.00 0.00 3.68
288 289 4.651778 AGCACTGAAATTGTAGGTAGCAA 58.348 39.130 0.00 0.00 0.00 3.91
289 290 4.286297 AGCACTGAAATTGTAGGTAGCA 57.714 40.909 0.00 0.00 0.00 3.49
290 291 4.672801 GCAAGCACTGAAATTGTAGGTAGC 60.673 45.833 0.00 0.00 0.00 3.58
291 292 4.455533 TGCAAGCACTGAAATTGTAGGTAG 59.544 41.667 0.00 0.00 0.00 3.18
292 293 4.393834 TGCAAGCACTGAAATTGTAGGTA 58.606 39.130 0.00 0.00 0.00 3.08
293 294 3.221771 TGCAAGCACTGAAATTGTAGGT 58.778 40.909 0.00 0.00 0.00 3.08
294 295 3.503363 TCTGCAAGCACTGAAATTGTAGG 59.497 43.478 0.00 0.00 37.29 3.18
295 296 4.453478 TCTCTGCAAGCACTGAAATTGTAG 59.547 41.667 0.00 0.00 37.81 2.74
296 297 4.388485 TCTCTGCAAGCACTGAAATTGTA 58.612 39.130 0.00 0.00 0.00 2.41
297 298 3.216800 TCTCTGCAAGCACTGAAATTGT 58.783 40.909 0.00 0.00 0.00 2.71
298 299 3.909776 TCTCTGCAAGCACTGAAATTG 57.090 42.857 0.00 0.00 0.00 2.32
299 300 5.105997 GGTATTCTCTGCAAGCACTGAAATT 60.106 40.000 8.38 0.00 0.00 1.82
300 301 4.397417 GGTATTCTCTGCAAGCACTGAAAT 59.603 41.667 8.38 2.42 0.00 2.17
301 302 3.753272 GGTATTCTCTGCAAGCACTGAAA 59.247 43.478 8.38 0.00 0.00 2.69
302 303 3.008375 AGGTATTCTCTGCAAGCACTGAA 59.992 43.478 7.21 7.21 0.00 3.02
303 304 2.568956 AGGTATTCTCTGCAAGCACTGA 59.431 45.455 0.00 0.00 0.00 3.41
304 305 2.983229 AGGTATTCTCTGCAAGCACTG 58.017 47.619 0.00 0.00 0.00 3.66
305 306 3.710209 AAGGTATTCTCTGCAAGCACT 57.290 42.857 0.00 0.00 0.00 4.40
306 307 4.331168 CAGTAAGGTATTCTCTGCAAGCAC 59.669 45.833 0.00 0.00 0.00 4.40
307 308 4.222810 TCAGTAAGGTATTCTCTGCAAGCA 59.777 41.667 0.00 0.00 0.00 3.91
308 309 4.759782 TCAGTAAGGTATTCTCTGCAAGC 58.240 43.478 0.00 0.00 0.00 4.01
309 310 7.389053 AGTTTTCAGTAAGGTATTCTCTGCAAG 59.611 37.037 0.00 0.00 0.00 4.01
310 311 7.173218 CAGTTTTCAGTAAGGTATTCTCTGCAA 59.827 37.037 0.00 0.00 0.00 4.08
311 312 6.650807 CAGTTTTCAGTAAGGTATTCTCTGCA 59.349 38.462 0.00 0.00 0.00 4.41
312 313 6.402658 GCAGTTTTCAGTAAGGTATTCTCTGC 60.403 42.308 0.00 0.00 36.00 4.26
313 314 6.876257 AGCAGTTTTCAGTAAGGTATTCTCTG 59.124 38.462 0.00 0.00 0.00 3.35
314 315 7.010339 AGCAGTTTTCAGTAAGGTATTCTCT 57.990 36.000 0.00 0.00 0.00 3.10
315 316 7.173390 ACAAGCAGTTTTCAGTAAGGTATTCTC 59.827 37.037 0.00 0.00 0.00 2.87
316 317 6.998673 ACAAGCAGTTTTCAGTAAGGTATTCT 59.001 34.615 0.00 0.00 0.00 2.40
317 318 7.041372 TGACAAGCAGTTTTCAGTAAGGTATTC 60.041 37.037 0.00 0.00 0.00 1.75
318 319 6.770785 TGACAAGCAGTTTTCAGTAAGGTATT 59.229 34.615 0.00 0.00 0.00 1.89
319 320 6.296026 TGACAAGCAGTTTTCAGTAAGGTAT 58.704 36.000 0.00 0.00 0.00 2.73
320 321 5.676552 TGACAAGCAGTTTTCAGTAAGGTA 58.323 37.500 0.00 0.00 0.00 3.08
321 322 4.523083 TGACAAGCAGTTTTCAGTAAGGT 58.477 39.130 0.00 0.00 0.00 3.50
322 323 5.695851 ATGACAAGCAGTTTTCAGTAAGG 57.304 39.130 0.00 0.00 0.00 2.69
323 324 6.638468 GGAAATGACAAGCAGTTTTCAGTAAG 59.362 38.462 8.04 0.00 34.49 2.34
324 325 6.321181 AGGAAATGACAAGCAGTTTTCAGTAA 59.679 34.615 8.04 0.00 34.49 2.24
325 326 5.827797 AGGAAATGACAAGCAGTTTTCAGTA 59.172 36.000 8.04 0.00 34.49 2.74
326 327 4.646492 AGGAAATGACAAGCAGTTTTCAGT 59.354 37.500 8.04 0.00 34.49 3.41
327 328 5.192327 AGGAAATGACAAGCAGTTTTCAG 57.808 39.130 8.04 0.00 34.49 3.02
328 329 5.360714 AGAAGGAAATGACAAGCAGTTTTCA 59.639 36.000 8.04 0.00 34.49 2.69
329 330 5.689068 CAGAAGGAAATGACAAGCAGTTTTC 59.311 40.000 0.00 0.00 34.49 2.29
330 331 5.594926 CAGAAGGAAATGACAAGCAGTTTT 58.405 37.500 0.00 0.00 34.49 2.43
331 332 4.500375 GCAGAAGGAAATGACAAGCAGTTT 60.500 41.667 0.00 0.00 34.49 2.66
332 333 3.005155 GCAGAAGGAAATGACAAGCAGTT 59.995 43.478 0.00 0.00 37.53 3.16
333 334 2.555757 GCAGAAGGAAATGACAAGCAGT 59.444 45.455 0.00 0.00 0.00 4.40
334 335 2.818432 AGCAGAAGGAAATGACAAGCAG 59.182 45.455 0.00 0.00 0.00 4.24
335 336 2.816087 GAGCAGAAGGAAATGACAAGCA 59.184 45.455 0.00 0.00 0.00 3.91
336 337 2.163211 GGAGCAGAAGGAAATGACAAGC 59.837 50.000 0.00 0.00 0.00 4.01
337 338 3.683802 AGGAGCAGAAGGAAATGACAAG 58.316 45.455 0.00 0.00 0.00 3.16
338 339 3.679389 GAGGAGCAGAAGGAAATGACAA 58.321 45.455 0.00 0.00 0.00 3.18
339 340 2.354103 CGAGGAGCAGAAGGAAATGACA 60.354 50.000 0.00 0.00 0.00 3.58
340 341 2.275318 CGAGGAGCAGAAGGAAATGAC 58.725 52.381 0.00 0.00 0.00 3.06
341 342 1.902508 ACGAGGAGCAGAAGGAAATGA 59.097 47.619 0.00 0.00 0.00 2.57
342 343 2.393271 ACGAGGAGCAGAAGGAAATG 57.607 50.000 0.00 0.00 0.00 2.32
343 344 2.616510 CCAACGAGGAGCAGAAGGAAAT 60.617 50.000 0.00 0.00 41.22 2.17
344 345 1.270839 CCAACGAGGAGCAGAAGGAAA 60.271 52.381 0.00 0.00 41.22 3.13
345 346 0.321671 CCAACGAGGAGCAGAAGGAA 59.678 55.000 0.00 0.00 41.22 3.36
346 347 1.544825 CCCAACGAGGAGCAGAAGGA 61.545 60.000 0.00 0.00 41.22 3.36
347 348 1.078848 CCCAACGAGGAGCAGAAGG 60.079 63.158 0.00 0.00 41.22 3.46
348 349 0.035458 AACCCAACGAGGAGCAGAAG 59.965 55.000 0.00 0.00 41.22 2.85
349 350 0.472471 AAACCCAACGAGGAGCAGAA 59.528 50.000 0.00 0.00 41.22 3.02
350 351 0.250295 CAAACCCAACGAGGAGCAGA 60.250 55.000 0.00 0.00 41.22 4.26
351 352 0.250295 TCAAACCCAACGAGGAGCAG 60.250 55.000 0.00 0.00 41.22 4.24
352 353 0.534203 GTCAAACCCAACGAGGAGCA 60.534 55.000 0.00 0.00 41.22 4.26
353 354 0.534203 TGTCAAACCCAACGAGGAGC 60.534 55.000 0.00 0.00 41.22 4.70
354 355 1.202651 AGTGTCAAACCCAACGAGGAG 60.203 52.381 0.00 0.00 41.22 3.69
355 356 0.834612 AGTGTCAAACCCAACGAGGA 59.165 50.000 0.00 0.00 41.22 3.71
356 357 1.202651 AGAGTGTCAAACCCAACGAGG 60.203 52.381 0.00 0.00 37.03 4.63
357 358 2.240493 AGAGTGTCAAACCCAACGAG 57.760 50.000 0.00 0.00 0.00 4.18
358 359 2.702592 AAGAGTGTCAAACCCAACGA 57.297 45.000 0.00 0.00 0.00 3.85
359 360 3.463944 AGTAAGAGTGTCAAACCCAACG 58.536 45.455 0.00 0.00 0.00 4.10
360 361 6.128634 CGATAAGTAAGAGTGTCAAACCCAAC 60.129 42.308 0.00 0.00 0.00 3.77
361 362 5.929992 CGATAAGTAAGAGTGTCAAACCCAA 59.070 40.000 0.00 0.00 0.00 4.12
362 363 5.244402 TCGATAAGTAAGAGTGTCAAACCCA 59.756 40.000 0.00 0.00 0.00 4.51
363 364 5.717119 TCGATAAGTAAGAGTGTCAAACCC 58.283 41.667 0.00 0.00 0.00 4.11
364 365 7.359849 GGTTTCGATAAGTAAGAGTGTCAAACC 60.360 40.741 0.00 0.00 33.25 3.27
365 366 7.170320 TGGTTTCGATAAGTAAGAGTGTCAAAC 59.830 37.037 0.00 0.00 0.00 2.93
366 367 7.170320 GTGGTTTCGATAAGTAAGAGTGTCAAA 59.830 37.037 0.00 0.00 0.00 2.69
367 368 6.643770 GTGGTTTCGATAAGTAAGAGTGTCAA 59.356 38.462 0.00 0.00 0.00 3.18
368 369 6.015688 AGTGGTTTCGATAAGTAAGAGTGTCA 60.016 38.462 0.00 0.00 0.00 3.58
369 370 6.388278 AGTGGTTTCGATAAGTAAGAGTGTC 58.612 40.000 0.00 0.00 0.00 3.67
370 371 6.342338 AGTGGTTTCGATAAGTAAGAGTGT 57.658 37.500 0.00 0.00 0.00 3.55
371 372 8.188799 TCATAGTGGTTTCGATAAGTAAGAGTG 58.811 37.037 0.00 0.00 0.00 3.51
372 373 8.289939 TCATAGTGGTTTCGATAAGTAAGAGT 57.710 34.615 0.00 0.00 0.00 3.24
378 379 9.303116 AGATCTATCATAGTGGTTTCGATAAGT 57.697 33.333 0.00 0.00 0.00 2.24
379 380 9.781834 GAGATCTATCATAGTGGTTTCGATAAG 57.218 37.037 0.00 0.00 0.00 1.73
380 381 8.740906 GGAGATCTATCATAGTGGTTTCGATAA 58.259 37.037 0.00 0.00 0.00 1.75
381 382 8.110271 AGGAGATCTATCATAGTGGTTTCGATA 58.890 37.037 0.00 0.00 0.00 2.92
382 383 6.951198 AGGAGATCTATCATAGTGGTTTCGAT 59.049 38.462 0.00 0.00 0.00 3.59
383 384 6.307776 AGGAGATCTATCATAGTGGTTTCGA 58.692 40.000 0.00 0.00 0.00 3.71
384 385 6.582677 AGGAGATCTATCATAGTGGTTTCG 57.417 41.667 0.00 0.00 0.00 3.46
388 389 9.693739 CAAGTATAGGAGATCTATCATAGTGGT 57.306 37.037 0.00 0.00 39.30 4.16
389 390 9.693739 ACAAGTATAGGAGATCTATCATAGTGG 57.306 37.037 0.00 0.00 39.30 4.00
391 392 9.693739 CCACAAGTATAGGAGATCTATCATAGT 57.306 37.037 0.00 0.00 39.30 2.12
392 393 9.130661 CCCACAAGTATAGGAGATCTATCATAG 57.869 40.741 0.00 0.00 39.30 2.23
393 394 8.624670 ACCCACAAGTATAGGAGATCTATCATA 58.375 37.037 0.00 0.00 39.30 2.15
394 395 7.483018 ACCCACAAGTATAGGAGATCTATCAT 58.517 38.462 0.00 0.00 39.30 2.45
395 396 6.864421 ACCCACAAGTATAGGAGATCTATCA 58.136 40.000 0.00 0.00 39.30 2.15
396 397 6.948886 TGACCCACAAGTATAGGAGATCTATC 59.051 42.308 0.00 0.00 39.30 2.08
397 398 6.864421 TGACCCACAAGTATAGGAGATCTAT 58.136 40.000 0.00 0.00 41.31 1.98
398 399 6.275692 TGACCCACAAGTATAGGAGATCTA 57.724 41.667 0.00 0.00 0.00 1.98
399 400 5.144159 TGACCCACAAGTATAGGAGATCT 57.856 43.478 0.00 0.00 0.00 2.75
400 401 5.540337 TGATGACCCACAAGTATAGGAGATC 59.460 44.000 0.00 0.00 0.00 2.75
401 402 5.467738 TGATGACCCACAAGTATAGGAGAT 58.532 41.667 0.00 0.00 0.00 2.75
402 403 4.878968 TGATGACCCACAAGTATAGGAGA 58.121 43.478 0.00 0.00 0.00 3.71
403 404 4.039730 CCTGATGACCCACAAGTATAGGAG 59.960 50.000 0.00 0.00 0.00 3.69
404 405 3.967326 CCTGATGACCCACAAGTATAGGA 59.033 47.826 0.00 0.00 0.00 2.94
405 406 3.495100 GCCTGATGACCCACAAGTATAGG 60.495 52.174 0.00 0.00 0.00 2.57
406 407 3.134623 TGCCTGATGACCCACAAGTATAG 59.865 47.826 0.00 0.00 0.00 1.31
407 408 3.111484 TGCCTGATGACCCACAAGTATA 58.889 45.455 0.00 0.00 0.00 1.47
408 409 1.915489 TGCCTGATGACCCACAAGTAT 59.085 47.619 0.00 0.00 0.00 2.12
409 410 1.357137 TGCCTGATGACCCACAAGTA 58.643 50.000 0.00 0.00 0.00 2.24
410 411 0.700564 ATGCCTGATGACCCACAAGT 59.299 50.000 0.00 0.00 0.00 3.16
411 412 1.100510 CATGCCTGATGACCCACAAG 58.899 55.000 0.00 0.00 33.31 3.16
412 413 0.323633 CCATGCCTGATGACCCACAA 60.324 55.000 0.00 0.00 33.31 3.33
413 414 1.206811 TCCATGCCTGATGACCCACA 61.207 55.000 0.00 0.00 33.31 4.17
414 415 0.465097 CTCCATGCCTGATGACCCAC 60.465 60.000 0.00 0.00 33.31 4.61
415 416 1.917495 CTCCATGCCTGATGACCCA 59.083 57.895 0.00 0.00 33.31 4.51
416 417 1.527844 GCTCCATGCCTGATGACCC 60.528 63.158 0.00 0.00 33.31 4.46
417 418 4.154296 GCTCCATGCCTGATGACC 57.846 61.111 0.00 0.00 33.31 4.02
514 515 1.304891 CCTTCCCTTGGGGTATTGGA 58.695 55.000 5.78 0.00 44.74 3.53
633 637 7.514127 TCCTCTCCATTGCTCCTATATTTACTT 59.486 37.037 0.00 0.00 0.00 2.24
646 650 2.117865 CTTCTCCTCCTCTCCATTGCT 58.882 52.381 0.00 0.00 0.00 3.91
649 653 3.012274 TCACTCTTCTCCTCCTCTCCATT 59.988 47.826 0.00 0.00 0.00 3.16
717 721 3.200605 TCATGGAGTCAGGCATAACACAT 59.799 43.478 0.00 0.00 0.00 3.21
718 722 2.571202 TCATGGAGTCAGGCATAACACA 59.429 45.455 0.00 0.00 0.00 3.72
719 723 3.266510 TCATGGAGTCAGGCATAACAC 57.733 47.619 0.00 0.00 0.00 3.32
724 730 3.021695 CACAATTCATGGAGTCAGGCAT 58.978 45.455 0.00 0.00 0.00 4.40
779 797 0.594796 CTTGCCCTTGTTGTCAACGC 60.595 55.000 11.03 8.51 0.00 4.84
802 820 2.770130 GGGCATTGGGTGAAGGGA 59.230 61.111 0.00 0.00 0.00 4.20
846 864 1.596895 GCGTCTTCGGGTCTTCCTCT 61.597 60.000 0.00 0.00 37.56 3.69
868 886 4.052229 CTCGTCGTCGCCACCCTT 62.052 66.667 0.00 0.00 36.96 3.95
909 933 2.507547 CCGTAGTTGCGGCGCTTA 60.508 61.111 33.26 18.13 45.47 3.09
939 963 2.060980 GTGAGTCGGGCCATCCTCT 61.061 63.158 4.39 0.00 0.00 3.69
984 1010 0.394762 GCATGGGGATGCACTCAAGA 60.395 55.000 2.14 0.00 46.25 3.02
1014 1040 4.090057 GCGGCGAAGTGCTTGGTC 62.090 66.667 12.98 0.00 45.43 4.02
1074 1100 0.534203 GCTTCACCGTCACCTTCCAA 60.534 55.000 0.00 0.00 0.00 3.53
1161 1187 2.571202 TGAGAATGTCACCATGTAGCCA 59.429 45.455 0.00 0.00 0.00 4.75
1178 1204 0.967887 CGGGAGTGAGGAGCTTGAGA 60.968 60.000 0.00 0.00 0.00 3.27
1179 1205 0.967887 TCGGGAGTGAGGAGCTTGAG 60.968 60.000 0.00 0.00 0.00 3.02
1236 1262 1.663695 CCACACTTGTTGACGACCTT 58.336 50.000 0.00 0.00 0.00 3.50
1253 1279 2.357034 GCTTCGTCGTGCTTCCCA 60.357 61.111 5.91 0.00 0.00 4.37
1321 1347 6.216801 ACAGTTCTACGCATAAACCATAGA 57.783 37.500 0.00 0.00 0.00 1.98
1602 1697 1.080298 GCAGCCTCAAATGCACCAC 60.080 57.895 0.00 0.00 42.11 4.16
1717 1813 7.147724 ACGATCTAGTTTAGGATGTGGAAATCA 60.148 37.037 0.00 0.00 0.00 2.57
1728 1824 7.359765 CGCAAAAGAAAACGATCTAGTTTAGGA 60.360 37.037 0.00 0.00 42.81 2.94
1732 1828 5.449304 CCGCAAAAGAAAACGATCTAGTTT 58.551 37.500 0.00 0.00 45.21 2.66
1747 1843 1.826385 AGTTCAGGATCCCGCAAAAG 58.174 50.000 8.55 0.00 0.00 2.27
1770 1867 4.093408 CCAGTATCAACAGAACATCAACGG 59.907 45.833 0.00 0.00 0.00 4.44
1821 1920 5.590259 GCATCTGCTCCCTTCTATTTTGTAA 59.410 40.000 0.00 0.00 38.21 2.41
1830 1929 0.473326 GGATGCATCTGCTCCCTTCT 59.527 55.000 25.28 0.00 42.66 2.85
1876 1975 5.539582 TTAATTTGTGTCTGCATCCGTAC 57.460 39.130 0.00 0.00 0.00 3.67
1895 1994 1.832883 ATGAGCCATGCCGTGTTTAA 58.167 45.000 0.00 0.00 0.00 1.52
1897 1996 2.057137 ATATGAGCCATGCCGTGTTT 57.943 45.000 0.00 0.00 0.00 2.83
1950 2049 9.429359 ACACAAAAGAGTTCTAAGAGATACATG 57.571 33.333 0.00 0.00 0.00 3.21
1953 2052 9.078753 GCTACACAAAAGAGTTCTAAGAGATAC 57.921 37.037 0.00 0.00 0.00 2.24
1954 2053 9.026121 AGCTACACAAAAGAGTTCTAAGAGATA 57.974 33.333 0.00 0.00 0.00 1.98
2092 4091 0.457035 ATCGTGTACGGCCGTGTTAT 59.543 50.000 40.02 21.78 40.29 1.89
2093 4092 1.063912 CTATCGTGTACGGCCGTGTTA 59.936 52.381 40.02 22.64 40.29 2.41
2111 4110 3.510360 GGTGGAGTTGTTCTGACTAGCTA 59.490 47.826 0.00 0.00 0.00 3.32
2113 4112 2.613223 GGGTGGAGTTGTTCTGACTAGC 60.613 54.545 0.00 0.00 0.00 3.42
2115 4114 1.616865 CGGGTGGAGTTGTTCTGACTA 59.383 52.381 0.00 0.00 0.00 2.59
2132 4131 3.353836 CAGTTTGTGTCGGCCGGG 61.354 66.667 27.83 0.00 0.00 5.73
2142 4141 1.949525 GGACACATGCAGACAGTTTGT 59.050 47.619 0.00 0.00 0.00 2.83
2155 4154 3.062042 GTTTCGACCTAAACGGACACAT 58.938 45.455 0.00 0.00 36.31 3.21
2185 4184 2.338620 CGTGAGTTGGGCAGACGA 59.661 61.111 0.00 0.00 31.71 4.20
2225 4241 3.701664 TGCCTCTAGACAGACATTGAGA 58.298 45.455 0.00 0.00 0.00 3.27
2230 4246 5.426504 CTTGAAATGCCTCTAGACAGACAT 58.573 41.667 0.00 0.00 0.00 3.06
2252 4268 6.075315 AGGAAACTACTTACAAATTTGGGCT 58.925 36.000 21.74 4.18 40.61 5.19
2265 4281 1.065418 CCGCATGGGAGGAAACTACTT 60.065 52.381 12.02 0.00 42.84 2.24
2266 4282 0.541863 CCGCATGGGAGGAAACTACT 59.458 55.000 12.02 0.00 42.84 2.57
2267 4283 0.539986 TCCGCATGGGAGGAAACTAC 59.460 55.000 12.02 0.00 44.43 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.