Multiple sequence alignment - TraesCS6B01G116200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G116200 chr6B 100.000 6013 0 0 1 6013 101736467 101730455 0.000000e+00 11105.0
1 TraesCS6B01G116200 chr6B 98.182 330 6 0 2890 3219 586097416 586097087 1.450000e-160 577.0
2 TraesCS6B01G116200 chr6B 97.289 332 9 0 2889 3220 9204667 9204336 1.130000e-156 564.0
3 TraesCS6B01G116200 chr6B 95.798 119 3 2 5896 6013 633686130 633686013 2.210000e-44 191.0
4 TraesCS6B01G116200 chr6B 78.689 183 35 2 5659 5841 101726415 101726237 1.060000e-22 119.0
5 TraesCS6B01G116200 chr6A 95.770 2222 74 10 684 2893 54175947 54178160 0.000000e+00 3565.0
6 TraesCS6B01G116200 chr6A 95.474 1392 52 6 3215 4600 54178157 54179543 0.000000e+00 2211.0
7 TraesCS6B01G116200 chr6A 96.393 1303 42 3 4597 5899 54179586 54180883 0.000000e+00 2141.0
8 TraesCS6B01G116200 chr6A 97.217 503 12 2 1 502 54175464 54175965 0.000000e+00 850.0
9 TraesCS6B01G116200 chr6A 95.890 219 6 3 486 702 13356377 13356160 9.590000e-93 351.0
10 TraesCS6B01G116200 chr6A 96.748 123 3 1 5891 6013 491260488 491260609 2.840000e-48 204.0
11 TraesCS6B01G116200 chr6A 80.734 109 20 1 5656 5764 54182747 54182854 3.860000e-12 84.2
12 TraesCS6B01G116200 chr6A 93.617 47 3 0 4432 4478 91898770 91898816 3.010000e-08 71.3
13 TraesCS6B01G116200 chrUn 94.853 2215 86 13 684 2893 70196686 70194495 0.000000e+00 3434.0
14 TraesCS6B01G116200 chrUn 94.953 1387 56 7 3215 4600 70194498 70193125 0.000000e+00 2161.0
15 TraesCS6B01G116200 chrUn 89.655 928 67 22 4597 5509 70193082 70192169 0.000000e+00 1155.0
16 TraesCS6B01G116200 chrUn 96.223 503 16 3 1 502 70197168 70196668 0.000000e+00 821.0
17 TraesCS6B01G116200 chrUn 98.421 190 2 1 501 689 289918767 289918578 3.470000e-87 333.0
18 TraesCS6B01G116200 chr4B 98.788 330 4 0 2890 3219 565380964 565380635 6.710000e-164 588.0
19 TraesCS6B01G116200 chr4B 90.756 119 9 1 5895 6013 106370804 106370688 2.240000e-34 158.0
20 TraesCS6B01G116200 chr3B 98.777 327 4 0 2890 3216 495416873 495417199 3.120000e-162 582.0
21 TraesCS6B01G116200 chr3B 98.182 330 6 0 2890 3219 600644562 600644233 1.450000e-160 577.0
22 TraesCS6B01G116200 chr2B 97.612 335 8 0 2885 3219 477287301 477286967 5.230000e-160 575.0
23 TraesCS6B01G116200 chr2B 97.885 331 7 0 2886 3216 25245838 25246168 1.880000e-159 573.0
24 TraesCS6B01G116200 chr2B 100.000 186 0 0 498 683 535506247 535506432 1.600000e-90 344.0
25 TraesCS6B01G116200 chr2B 91.379 58 3 2 4429 4485 680200088 680200144 1.800000e-10 78.7
26 TraesCS6B01G116200 chr2B 91.379 58 3 2 4475 4532 692467714 692467659 1.800000e-10 78.7
27 TraesCS6B01G116200 chr7B 97.273 330 9 0 2890 3219 153902963 153902634 1.460000e-155 560.0
28 TraesCS6B01G116200 chr7B 91.810 232 15 3 463 691 55865183 55864953 2.700000e-83 320.0
29 TraesCS6B01G116200 chr7B 93.162 117 6 1 5897 6013 287905116 287905230 2.880000e-38 171.0
30 TraesCS6B01G116200 chr7B 90.756 119 9 2 5895 6013 566932495 566932611 2.240000e-34 158.0
31 TraesCS6B01G116200 chr5B 97.273 330 8 1 2890 3219 123919686 123919358 5.260000e-155 558.0
32 TraesCS6B01G116200 chr5B 99.160 119 1 0 5895 6013 305583856 305583738 1.310000e-51 215.0
33 TraesCS6B01G116200 chr1A 94.643 224 9 3 486 708 33219845 33220066 1.600000e-90 344.0
34 TraesCS6B01G116200 chr7A 95.794 214 5 2 486 695 291727658 291727871 5.770000e-90 342.0
35 TraesCS6B01G116200 chr2A 97.059 204 3 3 481 683 362436446 362436647 2.080000e-89 340.0
36 TraesCS6B01G116200 chr2A 90.909 55 5 0 4475 4529 74782115 74782061 2.320000e-09 75.0
37 TraesCS6B01G116200 chr1B 97.030 202 6 0 499 700 304518427 304518628 2.080000e-89 340.0
38 TraesCS6B01G116200 chr1B 95.935 123 4 1 5891 6013 287702363 287702484 1.320000e-46 198.0
39 TraesCS6B01G116200 chr1B 91.525 118 8 1 5896 6013 530999053 530999168 1.730000e-35 161.0
40 TraesCS6B01G116200 chr1B 94.444 54 3 0 4475 4528 439444780 439444727 3.860000e-12 84.2
41 TraesCS6B01G116200 chr3A 95.392 217 3 6 485 696 509883566 509883780 7.460000e-89 339.0
42 TraesCS6B01G116200 chr5A 96.639 119 4 0 5895 6013 265249394 265249276 1.320000e-46 198.0
43 TraesCS6B01G116200 chr2D 88.235 102 10 2 4431 4531 566989100 566989000 2.940000e-23 121.0
44 TraesCS6B01G116200 chr2D 93.878 49 3 0 4429 4477 567483499 567483547 2.320000e-09 75.0
45 TraesCS6B01G116200 chr4A 84.694 98 13 2 4432 4527 602248949 602248852 4.960000e-16 97.1
46 TraesCS6B01G116200 chr3D 93.103 58 2 2 4475 4531 133538612 133538556 3.860000e-12 84.2
47 TraesCS6B01G116200 chr4D 83.146 89 10 3 4432 4516 119799301 119799388 6.460000e-10 76.8
48 TraesCS6B01G116200 chr6D 95.652 46 2 0 4432 4477 294085170 294085215 2.320000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G116200 chr6B 101730455 101736467 6012 True 11105.00 11105 100.0000 1 6013 1 chr6B.!!$R3 6012
1 TraesCS6B01G116200 chr6A 54175464 54182854 7390 False 1770.24 3565 93.1176 1 5899 5 chr6A.!!$F3 5898
2 TraesCS6B01G116200 chrUn 70192169 70197168 4999 True 1892.75 3434 93.9210 1 5509 4 chrUn.!!$R2 5508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
537 539 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35 F
539 541 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16 F
1472 1480 0.183492 GGGCCCTGCATCTCATTGTA 59.817 55.000 17.04 0.00 0.00 2.41 F
2440 2458 1.068121 ACCTCACCCCCTTCTTTCTG 58.932 55.000 0.00 0.00 0.00 3.02 F
2905 2934 1.139058 CACATACTCCCTCCTTTCCGG 59.861 57.143 0.00 0.00 0.00 5.14 F
2906 2935 1.273666 ACATACTCCCTCCTTTCCGGT 60.274 52.381 0.00 0.00 0.00 5.28 F
2907 2936 1.838077 CATACTCCCTCCTTTCCGGTT 59.162 52.381 0.00 0.00 0.00 4.44 F
2969 2998 2.031870 GGCTCAATATGGTTGTTCCCC 58.968 52.381 0.00 0.00 34.77 4.81 F
4884 4973 2.096819 TGACGAAAACAACCTTGTCTGC 59.903 45.455 0.00 0.00 41.31 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2290 2301 0.542333 GAAGGACCAGGAGTTAGGCC 59.458 60.000 0.00 0.0 0.00 5.19 R
2363 2381 2.289565 GCTATCCAGCCAAGTGGTAAC 58.710 52.381 0.00 0.0 42.37 2.50 R
3198 3227 0.412640 AGTACTCCCTCCTTTCCGGT 59.587 55.000 0.00 0.0 0.00 5.28 R
3466 3495 0.530744 TCTGCAGGTACGAAGCGATT 59.469 50.000 15.13 0.0 0.00 3.34 R
4516 4555 2.083628 AATGGTAGTACTCCCTCCGG 57.916 55.000 6.02 0.0 0.00 5.14 R
4691 4775 2.613691 ACACGTTAAGTAGGAATGCCG 58.386 47.619 0.00 0.0 39.96 5.69 R
4884 4973 3.327404 AGGGTAACACCTGCCGGG 61.327 66.667 2.18 0.0 40.04 5.73 R
4949 5038 2.306805 TGGCATCTCCTCTTGTTCATGT 59.693 45.455 0.00 0.0 35.26 3.21 R
5961 6058 0.161024 GGACAACGAAACGAGCGAAG 59.839 55.000 0.00 0.0 0.00 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 109 1.002011 GCTGAAGGGGGAGGTTGTC 60.002 63.158 0.00 0.00 0.00 3.18
349 350 6.821388 TGAGTTCTTGAAAGGATAGGATAGC 58.179 40.000 0.00 0.00 0.00 2.97
425 427 8.634475 AATCAAGAAGTTAAAAACAAGACAGC 57.366 30.769 0.00 0.00 0.00 4.40
459 461 2.357009 CCATCAACTCTGCATTAGTGGC 59.643 50.000 2.84 0.00 0.00 5.01
500 502 6.250344 TCAGACATTCATTTCTCAGCAAAG 57.750 37.500 0.00 0.00 0.00 2.77
501 503 5.999600 TCAGACATTCATTTCTCAGCAAAGA 59.000 36.000 0.00 0.00 0.00 2.52
502 504 6.487668 TCAGACATTCATTTCTCAGCAAAGAA 59.512 34.615 0.00 0.00 33.50 2.52
503 505 6.802348 CAGACATTCATTTCTCAGCAAAGAAG 59.198 38.462 1.71 0.00 36.66 2.85
504 506 6.022163 ACATTCATTTCTCAGCAAAGAAGG 57.978 37.500 1.71 0.00 36.66 3.46
505 507 5.047519 ACATTCATTTCTCAGCAAAGAAGGG 60.048 40.000 1.71 0.00 36.66 3.95
506 508 3.424703 TCATTTCTCAGCAAAGAAGGGG 58.575 45.455 1.71 0.00 36.66 4.79
507 509 3.074390 TCATTTCTCAGCAAAGAAGGGGA 59.926 43.478 1.71 0.00 36.66 4.81
508 510 2.867109 TTCTCAGCAAAGAAGGGGAG 57.133 50.000 0.00 0.00 31.71 4.30
509 511 0.326264 TCTCAGCAAAGAAGGGGAGC 59.674 55.000 0.00 0.00 0.00 4.70
510 512 0.679321 CTCAGCAAAGAAGGGGAGCC 60.679 60.000 0.00 0.00 0.00 4.70
511 513 1.136329 TCAGCAAAGAAGGGGAGCCT 61.136 55.000 0.00 0.00 0.00 4.58
512 514 0.251519 CAGCAAAGAAGGGGAGCCTT 60.252 55.000 0.00 0.00 0.00 4.35
513 515 0.251519 AGCAAAGAAGGGGAGCCTTG 60.252 55.000 0.00 0.00 0.00 3.61
514 516 1.253593 GCAAAGAAGGGGAGCCTTGG 61.254 60.000 0.00 0.00 0.00 3.61
515 517 1.077445 AAAGAAGGGGAGCCTTGGC 59.923 57.895 2.97 2.97 0.00 4.52
516 518 2.771328 AAAGAAGGGGAGCCTTGGCG 62.771 60.000 5.95 0.00 0.00 5.69
524 526 3.605749 GAGCCTTGGCGCAGTGGTA 62.606 63.158 10.83 0.00 0.00 3.25
525 527 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
526 528 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
527 529 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
528 530 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
529 531 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
530 532 1.514678 TTGGCGCAGTGGTAAAGCTG 61.515 55.000 10.83 0.00 35.93 4.24
535 537 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
536 538 0.607489 CAGTGGTAAAGCTGCTGCCT 60.607 55.000 12.44 2.45 40.80 4.75
537 539 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
538 540 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
539 541 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
540 542 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
541 543 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
542 544 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
543 545 1.458639 AAAGCTGCTGCCTTGTGACC 61.459 55.000 12.44 0.00 40.80 4.02
544 546 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
545 547 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
546 548 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
547 549 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
548 550 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
549 551 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
564 566 2.859165 TGAGGTCATGGGTTCAAGTC 57.141 50.000 0.00 0.00 0.00 3.01
565 567 1.351017 TGAGGTCATGGGTTCAAGTCC 59.649 52.381 0.00 0.00 0.00 3.85
566 568 1.630878 GAGGTCATGGGTTCAAGTCCT 59.369 52.381 0.00 0.00 0.00 3.85
567 569 1.352352 AGGTCATGGGTTCAAGTCCTG 59.648 52.381 0.00 0.00 0.00 3.86
568 570 1.614317 GGTCATGGGTTCAAGTCCTGG 60.614 57.143 0.00 0.00 0.00 4.45
569 571 1.351017 GTCATGGGTTCAAGTCCTGGA 59.649 52.381 0.00 0.00 0.00 3.86
570 572 2.061848 TCATGGGTTCAAGTCCTGGAA 58.938 47.619 0.00 0.00 0.00 3.53
571 573 2.445145 TCATGGGTTCAAGTCCTGGAAA 59.555 45.455 0.00 0.00 0.00 3.13
572 574 2.358322 TGGGTTCAAGTCCTGGAAAC 57.642 50.000 0.00 0.00 0.00 2.78
573 575 1.566703 TGGGTTCAAGTCCTGGAAACA 59.433 47.619 0.00 0.00 32.36 2.83
587 589 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
588 590 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
589 591 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
590 592 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
591 593 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
592 594 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
593 595 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
594 596 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
595 597 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
596 598 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
597 599 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
598 600 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
599 601 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
600 602 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
601 603 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
602 604 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
603 605 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
604 606 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
605 607 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
606 608 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
607 609 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
608 610 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
609 611 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
610 612 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
611 613 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
612 614 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
613 615 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
614 616 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
615 617 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
616 618 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
617 619 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
618 620 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
619 621 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
620 622 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
621 623 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
622 624 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
623 625 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
624 626 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
629 631 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
630 632 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
631 633 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
632 634 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
633 635 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
634 636 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
635 637 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
636 638 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
637 639 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
638 640 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
639 641 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
640 642 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
641 643 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
642 644 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
643 645 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
644 646 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
645 647 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
646 648 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
647 649 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
648 650 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
673 675 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
674 676 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
675 677 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
676 678 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
677 679 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
678 680 1.788518 TACATGCACCAGGTTGCCCT 61.789 55.000 10.46 0.00 42.25 5.19
679 681 1.909781 CATGCACCAGGTTGCCCTT 60.910 57.895 10.46 0.00 42.25 3.95
680 682 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
681 683 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27
682 684 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94
683 685 1.044611 GCACCAGGTTGCCCTTTTTA 58.955 50.000 0.00 0.00 39.89 1.52
684 686 1.623311 GCACCAGGTTGCCCTTTTTAT 59.377 47.619 0.00 0.00 39.89 1.40
685 687 2.038426 GCACCAGGTTGCCCTTTTTATT 59.962 45.455 0.00 0.00 39.89 1.40
686 688 3.864540 GCACCAGGTTGCCCTTTTTATTC 60.865 47.826 0.00 0.00 39.89 1.75
687 689 3.323403 CACCAGGTTGCCCTTTTTATTCA 59.677 43.478 0.00 0.00 39.89 2.57
688 690 4.020307 CACCAGGTTGCCCTTTTTATTCAT 60.020 41.667 0.00 0.00 39.89 2.57
689 691 4.597075 ACCAGGTTGCCCTTTTTATTCATT 59.403 37.500 0.00 0.00 39.89 2.57
690 692 5.073008 ACCAGGTTGCCCTTTTTATTCATTT 59.927 36.000 0.00 0.00 39.89 2.32
691 693 5.643348 CCAGGTTGCCCTTTTTATTCATTTC 59.357 40.000 0.00 0.00 39.89 2.17
692 694 6.466812 CAGGTTGCCCTTTTTATTCATTTCT 58.533 36.000 0.00 0.00 39.89 2.52
693 695 6.591448 CAGGTTGCCCTTTTTATTCATTTCTC 59.409 38.462 0.00 0.00 39.89 2.87
694 696 6.269769 AGGTTGCCCTTTTTATTCATTTCTCA 59.730 34.615 0.00 0.00 38.13 3.27
695 697 6.591448 GGTTGCCCTTTTTATTCATTTCTCAG 59.409 38.462 0.00 0.00 0.00 3.35
696 698 5.723295 TGCCCTTTTTATTCATTTCTCAGC 58.277 37.500 0.00 0.00 0.00 4.26
697 699 5.245751 TGCCCTTTTTATTCATTTCTCAGCA 59.754 36.000 0.00 0.00 0.00 4.41
698 700 6.165577 GCCCTTTTTATTCATTTCTCAGCAA 58.834 36.000 0.00 0.00 0.00 3.91
699 701 6.650390 GCCCTTTTTATTCATTTCTCAGCAAA 59.350 34.615 0.00 0.00 0.00 3.68
726 728 3.917380 CAGAGTTTCTCAGCAAGACTACG 59.083 47.826 0.00 0.00 32.27 3.51
894 898 1.895131 AGTAATGCCTTGCCAAACAGG 59.105 47.619 0.00 0.00 41.84 4.00
1055 1059 5.011227 ACGCACCATTTACCTTTAAACCATT 59.989 36.000 0.00 0.00 29.77 3.16
1075 1079 1.745232 TGCCCCGCATAAACAAGTAG 58.255 50.000 0.00 0.00 31.71 2.57
1101 1105 8.782137 ACCATCCCAAACAAGCTATATATTTT 57.218 30.769 0.00 0.00 0.00 1.82
1408 1412 1.943730 TTCTGGGGCCTTTGGTGTGT 61.944 55.000 0.84 0.00 0.00 3.72
1445 1453 5.123227 TGCCTATATTAGTCGCTTTGCTTT 58.877 37.500 0.00 0.00 0.00 3.51
1446 1454 6.285224 TGCCTATATTAGTCGCTTTGCTTTA 58.715 36.000 0.00 0.00 0.00 1.85
1447 1455 6.764085 TGCCTATATTAGTCGCTTTGCTTTAA 59.236 34.615 0.00 0.00 0.00 1.52
1448 1456 7.444183 TGCCTATATTAGTCGCTTTGCTTTAAT 59.556 33.333 0.00 0.00 0.00 1.40
1472 1480 0.183492 GGGCCCTGCATCTCATTGTA 59.817 55.000 17.04 0.00 0.00 2.41
1549 1557 3.128589 TGTCTTTCAGGCAGTTGTGAAAC 59.871 43.478 0.00 0.00 37.67 2.78
1568 1576 7.867909 TGTGAAACATCTGTATACTAGCTATGC 59.132 37.037 4.17 0.00 45.67 3.14
1632 1640 3.761752 TGGCCTACTTTGCTTATTGAACC 59.238 43.478 3.32 0.00 0.00 3.62
1678 1686 7.598493 GTGGTTTATGCATTGTCAGTTTGTTAT 59.402 33.333 3.54 0.00 0.00 1.89
1679 1687 8.797438 TGGTTTATGCATTGTCAGTTTGTTATA 58.203 29.630 3.54 0.00 0.00 0.98
1792 1800 3.066064 TCGTGCTGCAAAGTTATTGTTGT 59.934 39.130 2.77 0.00 0.00 3.32
1839 1847 3.371034 TCGACACAATCCTAATCCCTCA 58.629 45.455 0.00 0.00 0.00 3.86
1885 1893 1.539157 GGAACCTCTTTCTGGGCAAG 58.461 55.000 0.00 0.00 34.26 4.01
1898 1906 3.054139 TCTGGGCAAGCAAGATCTACAAT 60.054 43.478 0.00 0.00 0.00 2.71
1902 1910 4.036144 GGGCAAGCAAGATCTACAATCTTC 59.964 45.833 0.00 0.00 36.32 2.87
2068 2076 2.929641 TGGTGTCAACTGCATTCTTCA 58.070 42.857 0.00 0.00 0.00 3.02
2290 2301 9.263538 TGAAGATTTTTGAAAATGACAATCCTG 57.736 29.630 6.44 0.00 38.64 3.86
2440 2458 1.068121 ACCTCACCCCCTTCTTTCTG 58.932 55.000 0.00 0.00 0.00 3.02
2559 2588 2.810650 CCCAGCAACTCGACACTATAC 58.189 52.381 0.00 0.00 0.00 1.47
2560 2589 2.427453 CCCAGCAACTCGACACTATACT 59.573 50.000 0.00 0.00 0.00 2.12
2561 2590 3.439293 CCAGCAACTCGACACTATACTG 58.561 50.000 0.00 0.00 0.00 2.74
2562 2591 3.119459 CCAGCAACTCGACACTATACTGT 60.119 47.826 0.00 0.00 0.00 3.55
2563 2592 4.095932 CCAGCAACTCGACACTATACTGTA 59.904 45.833 0.00 0.00 0.00 2.74
2564 2593 5.221067 CCAGCAACTCGACACTATACTGTAT 60.221 44.000 5.53 5.53 0.00 2.29
2565 2594 5.910166 CAGCAACTCGACACTATACTGTATC 59.090 44.000 3.09 0.00 0.00 2.24
2566 2595 5.823570 AGCAACTCGACACTATACTGTATCT 59.176 40.000 3.09 0.00 0.00 1.98
2567 2596 5.910166 GCAACTCGACACTATACTGTATCTG 59.090 44.000 3.09 4.03 0.00 2.90
2568 2597 6.431278 CAACTCGACACTATACTGTATCTGG 58.569 44.000 3.09 0.00 0.00 3.86
2569 2598 5.926663 ACTCGACACTATACTGTATCTGGA 58.073 41.667 3.09 0.00 0.00 3.86
2570 2599 6.535540 ACTCGACACTATACTGTATCTGGAT 58.464 40.000 3.09 0.00 0.00 3.41
2571 2600 7.677892 ACTCGACACTATACTGTATCTGGATA 58.322 38.462 3.09 0.00 0.00 2.59
2572 2601 8.155510 ACTCGACACTATACTGTATCTGGATAA 58.844 37.037 3.09 0.00 0.00 1.75
2697 2726 9.391006 TGGCGATCATATTAAGTTCTTACTTTT 57.609 29.630 0.00 0.00 41.85 2.27
2713 2742 7.295201 TCTTACTTTTATGACGAACAATGCAC 58.705 34.615 0.00 0.00 0.00 4.57
2752 2781 9.209175 CTCTAGCTTGTATAACAGTGTTTCTTT 57.791 33.333 14.90 0.08 0.00 2.52
2796 2825 6.785466 TGATGTTAGGACTAATGGGCTATACA 59.215 38.462 0.00 0.00 0.00 2.29
2798 2827 7.626999 TGTTAGGACTAATGGGCTATACATT 57.373 36.000 0.00 0.00 41.17 2.71
2889 2918 4.162320 ACTGGACCGTCATTCTTATCACAT 59.838 41.667 0.00 0.00 0.00 3.21
2890 2919 5.362717 ACTGGACCGTCATTCTTATCACATA 59.637 40.000 0.00 0.00 0.00 2.29
2891 2920 5.597806 TGGACCGTCATTCTTATCACATAC 58.402 41.667 0.00 0.00 0.00 2.39
2892 2921 5.362717 TGGACCGTCATTCTTATCACATACT 59.637 40.000 0.00 0.00 0.00 2.12
2893 2922 5.921408 GGACCGTCATTCTTATCACATACTC 59.079 44.000 0.00 0.00 0.00 2.59
2894 2923 5.844004 ACCGTCATTCTTATCACATACTCC 58.156 41.667 0.00 0.00 0.00 3.85
2895 2924 5.221461 ACCGTCATTCTTATCACATACTCCC 60.221 44.000 0.00 0.00 0.00 4.30
2896 2925 5.011125 CCGTCATTCTTATCACATACTCCCT 59.989 44.000 0.00 0.00 0.00 4.20
2897 2926 6.153067 CGTCATTCTTATCACATACTCCCTC 58.847 44.000 0.00 0.00 0.00 4.30
2898 2927 6.459923 GTCATTCTTATCACATACTCCCTCC 58.540 44.000 0.00 0.00 0.00 4.30
2899 2928 6.268847 GTCATTCTTATCACATACTCCCTCCT 59.731 42.308 0.00 0.00 0.00 3.69
2900 2929 6.846505 TCATTCTTATCACATACTCCCTCCTT 59.153 38.462 0.00 0.00 0.00 3.36
2901 2930 7.348274 TCATTCTTATCACATACTCCCTCCTTT 59.652 37.037 0.00 0.00 0.00 3.11
2902 2931 6.732896 TCTTATCACATACTCCCTCCTTTC 57.267 41.667 0.00 0.00 0.00 2.62
2903 2932 5.602978 TCTTATCACATACTCCCTCCTTTCC 59.397 44.000 0.00 0.00 0.00 3.13
2904 2933 2.108168 TCACATACTCCCTCCTTTCCG 58.892 52.381 0.00 0.00 0.00 4.30
2905 2934 1.139058 CACATACTCCCTCCTTTCCGG 59.861 57.143 0.00 0.00 0.00 5.14
2906 2935 1.273666 ACATACTCCCTCCTTTCCGGT 60.274 52.381 0.00 0.00 0.00 5.28
2907 2936 1.838077 CATACTCCCTCCTTTCCGGTT 59.162 52.381 0.00 0.00 0.00 4.44
2908 2937 2.034436 TACTCCCTCCTTTCCGGTTT 57.966 50.000 0.00 0.00 0.00 3.27
2909 2938 2.034436 ACTCCCTCCTTTCCGGTTTA 57.966 50.000 0.00 0.00 0.00 2.01
2910 2939 2.558974 ACTCCCTCCTTTCCGGTTTAT 58.441 47.619 0.00 0.00 0.00 1.40
2911 2940 3.727948 ACTCCCTCCTTTCCGGTTTATA 58.272 45.455 0.00 0.00 0.00 0.98
2912 2941 3.710165 ACTCCCTCCTTTCCGGTTTATAG 59.290 47.826 0.00 0.00 0.00 1.31
2913 2942 3.043418 TCCCTCCTTTCCGGTTTATAGG 58.957 50.000 0.00 4.62 0.00 2.57
2914 2943 2.105993 CCCTCCTTTCCGGTTTATAGGG 59.894 54.545 16.03 16.03 36.05 3.53
2915 2944 2.486727 CCTCCTTTCCGGTTTATAGGGC 60.487 54.545 0.00 0.00 0.00 5.19
2916 2945 2.438392 CTCCTTTCCGGTTTATAGGGCT 59.562 50.000 0.00 0.00 0.00 5.19
2917 2946 2.848071 TCCTTTCCGGTTTATAGGGCTT 59.152 45.455 0.00 0.00 0.00 4.35
2918 2947 4.039339 TCCTTTCCGGTTTATAGGGCTTA 58.961 43.478 0.00 0.00 0.00 3.09
2919 2948 4.661709 TCCTTTCCGGTTTATAGGGCTTAT 59.338 41.667 0.00 0.00 0.00 1.73
2920 2949 5.001874 CCTTTCCGGTTTATAGGGCTTATC 58.998 45.833 0.00 0.00 0.00 1.75
2921 2950 5.221864 CCTTTCCGGTTTATAGGGCTTATCT 60.222 44.000 0.00 0.00 0.00 1.98
2922 2951 5.479124 TTCCGGTTTATAGGGCTTATCTC 57.521 43.478 0.00 0.00 0.00 2.75
2923 2952 4.485875 TCCGGTTTATAGGGCTTATCTCA 58.514 43.478 0.00 0.00 0.00 3.27
2924 2953 4.903049 TCCGGTTTATAGGGCTTATCTCAA 59.097 41.667 0.00 0.00 0.00 3.02
2925 2954 5.367352 TCCGGTTTATAGGGCTTATCTCAAA 59.633 40.000 0.00 0.00 0.00 2.69
2926 2955 6.059484 CCGGTTTATAGGGCTTATCTCAAAA 58.941 40.000 0.00 0.00 0.00 2.44
2927 2956 6.715264 CCGGTTTATAGGGCTTATCTCAAAAT 59.285 38.462 0.00 0.00 0.00 1.82
2928 2957 7.230712 CCGGTTTATAGGGCTTATCTCAAAATT 59.769 37.037 0.00 0.00 0.00 1.82
2929 2958 8.630037 CGGTTTATAGGGCTTATCTCAAAATTT 58.370 33.333 0.00 0.00 0.00 1.82
2930 2959 9.967346 GGTTTATAGGGCTTATCTCAAAATTTC 57.033 33.333 0.00 0.00 0.00 2.17
2933 2962 9.920946 TTATAGGGCTTATCTCAAAATTTCAGT 57.079 29.630 0.00 0.00 0.00 3.41
2934 2963 8.829373 ATAGGGCTTATCTCAAAATTTCAGTT 57.171 30.769 0.00 0.00 0.00 3.16
2935 2964 7.544804 AGGGCTTATCTCAAAATTTCAGTTT 57.455 32.000 0.00 0.00 0.00 2.66
2936 2965 7.966812 AGGGCTTATCTCAAAATTTCAGTTTT 58.033 30.769 0.00 0.00 0.00 2.43
2937 2966 8.432013 AGGGCTTATCTCAAAATTTCAGTTTTT 58.568 29.630 0.00 0.00 0.00 1.94
2938 2967 8.712363 GGGCTTATCTCAAAATTTCAGTTTTTC 58.288 33.333 0.00 0.00 0.00 2.29
2939 2968 8.712363 GGCTTATCTCAAAATTTCAGTTTTTCC 58.288 33.333 0.00 0.00 0.00 3.13
2940 2969 9.260002 GCTTATCTCAAAATTTCAGTTTTTCCA 57.740 29.630 0.00 0.00 0.00 3.53
2953 2982 9.705290 TTTCAGTTTTTCCATTTTATAAGGCTC 57.295 29.630 0.00 0.00 0.00 4.70
2954 2983 8.415950 TCAGTTTTTCCATTTTATAAGGCTCA 57.584 30.769 0.00 0.00 0.00 4.26
2955 2984 8.865090 TCAGTTTTTCCATTTTATAAGGCTCAA 58.135 29.630 0.00 0.00 0.00 3.02
2956 2985 9.657419 CAGTTTTTCCATTTTATAAGGCTCAAT 57.343 29.630 0.00 0.00 0.00 2.57
2961 2990 9.432982 TTTCCATTTTATAAGGCTCAATATGGT 57.567 29.630 17.37 0.00 34.37 3.55
2962 2991 9.432982 TTCCATTTTATAAGGCTCAATATGGTT 57.567 29.630 17.37 0.00 34.37 3.67
2963 2992 8.859090 TCCATTTTATAAGGCTCAATATGGTTG 58.141 33.333 17.37 0.00 34.37 3.77
2964 2993 8.641541 CCATTTTATAAGGCTCAATATGGTTGT 58.358 33.333 13.20 0.00 30.58 3.32
2967 2996 7.817418 TTATAAGGCTCAATATGGTTGTTCC 57.183 36.000 0.00 0.00 0.00 3.62
2968 2997 3.018423 AGGCTCAATATGGTTGTTCCC 57.982 47.619 0.00 0.00 34.77 3.97
2969 2998 2.031870 GGCTCAATATGGTTGTTCCCC 58.968 52.381 0.00 0.00 34.77 4.81
2970 2999 2.622977 GGCTCAATATGGTTGTTCCCCA 60.623 50.000 0.00 0.00 36.16 4.96
2971 3000 3.299503 GCTCAATATGGTTGTTCCCCAT 58.700 45.455 0.00 0.00 44.76 4.00
2972 3001 3.706086 GCTCAATATGGTTGTTCCCCATT 59.294 43.478 0.00 0.00 42.63 3.16
2973 3002 4.892934 GCTCAATATGGTTGTTCCCCATTA 59.107 41.667 0.00 0.00 42.63 1.90
2974 3003 5.221244 GCTCAATATGGTTGTTCCCCATTAC 60.221 44.000 0.00 0.00 42.63 1.89
2975 3004 5.832221 TCAATATGGTTGTTCCCCATTACA 58.168 37.500 0.00 0.00 42.63 2.41
2976 3005 6.439487 TCAATATGGTTGTTCCCCATTACAT 58.561 36.000 0.00 0.00 42.63 2.29
2977 3006 6.323482 TCAATATGGTTGTTCCCCATTACATG 59.677 38.462 0.00 0.00 42.63 3.21
2978 3007 3.534357 TGGTTGTTCCCCATTACATGT 57.466 42.857 2.69 2.69 34.77 3.21
2979 3008 3.850752 TGGTTGTTCCCCATTACATGTT 58.149 40.909 2.30 0.00 34.77 2.71
2980 3009 3.829601 TGGTTGTTCCCCATTACATGTTC 59.170 43.478 2.30 0.00 34.77 3.18
2981 3010 3.829601 GGTTGTTCCCCATTACATGTTCA 59.170 43.478 2.30 0.00 0.00 3.18
2982 3011 4.082245 GGTTGTTCCCCATTACATGTTCAG 60.082 45.833 2.30 0.00 0.00 3.02
2983 3012 4.649267 TGTTCCCCATTACATGTTCAGA 57.351 40.909 2.30 0.00 0.00 3.27
2984 3013 5.191727 TGTTCCCCATTACATGTTCAGAT 57.808 39.130 2.30 0.00 0.00 2.90
2985 3014 5.579047 TGTTCCCCATTACATGTTCAGATT 58.421 37.500 2.30 0.00 0.00 2.40
2986 3015 5.652014 TGTTCCCCATTACATGTTCAGATTC 59.348 40.000 2.30 0.00 0.00 2.52
2987 3016 4.792068 TCCCCATTACATGTTCAGATTCC 58.208 43.478 2.30 0.00 0.00 3.01
2988 3017 4.229353 TCCCCATTACATGTTCAGATTCCA 59.771 41.667 2.30 0.00 0.00 3.53
2989 3018 4.955450 CCCCATTACATGTTCAGATTCCAA 59.045 41.667 2.30 0.00 0.00 3.53
2990 3019 5.068198 CCCCATTACATGTTCAGATTCCAAG 59.932 44.000 2.30 0.00 0.00 3.61
2991 3020 5.068198 CCCATTACATGTTCAGATTCCAAGG 59.932 44.000 2.30 0.00 0.00 3.61
2992 3021 5.653769 CCATTACATGTTCAGATTCCAAGGT 59.346 40.000 2.30 0.00 0.00 3.50
2993 3022 6.405065 CCATTACATGTTCAGATTCCAAGGTG 60.405 42.308 2.30 0.00 0.00 4.00
2994 3023 2.821969 ACATGTTCAGATTCCAAGGTGC 59.178 45.455 0.00 0.00 0.00 5.01
2995 3024 2.655090 TGTTCAGATTCCAAGGTGCA 57.345 45.000 0.00 0.00 0.00 4.57
2996 3025 3.159213 TGTTCAGATTCCAAGGTGCAT 57.841 42.857 0.00 0.00 0.00 3.96
2997 3026 3.499338 TGTTCAGATTCCAAGGTGCATT 58.501 40.909 0.00 0.00 0.00 3.56
2998 3027 4.661222 TGTTCAGATTCCAAGGTGCATTA 58.339 39.130 0.00 0.00 0.00 1.90
2999 3028 5.076182 TGTTCAGATTCCAAGGTGCATTAA 58.924 37.500 0.00 0.00 0.00 1.40
3000 3029 5.538053 TGTTCAGATTCCAAGGTGCATTAAA 59.462 36.000 0.00 0.00 0.00 1.52
3001 3030 6.211184 TGTTCAGATTCCAAGGTGCATTAAAT 59.789 34.615 0.00 0.00 0.00 1.40
3002 3031 6.455360 TCAGATTCCAAGGTGCATTAAATC 57.545 37.500 0.00 0.00 0.00 2.17
3003 3032 5.951148 TCAGATTCCAAGGTGCATTAAATCA 59.049 36.000 0.00 0.00 0.00 2.57
3004 3033 6.608405 TCAGATTCCAAGGTGCATTAAATCAT 59.392 34.615 0.00 0.00 0.00 2.45
3005 3034 7.124599 TCAGATTCCAAGGTGCATTAAATCATT 59.875 33.333 0.00 0.00 0.00 2.57
3006 3035 7.223971 CAGATTCCAAGGTGCATTAAATCATTG 59.776 37.037 0.00 0.00 0.00 2.82
3007 3036 4.757594 TCCAAGGTGCATTAAATCATTGC 58.242 39.130 0.00 0.00 36.91 3.56
3008 3037 4.222366 TCCAAGGTGCATTAAATCATTGCA 59.778 37.500 0.00 0.00 43.63 4.08
3009 3038 5.104859 TCCAAGGTGCATTAAATCATTGCAT 60.105 36.000 4.14 0.00 46.90 3.96
3010 3039 5.007234 CCAAGGTGCATTAAATCATTGCATG 59.993 40.000 4.14 0.00 46.90 4.06
3011 3040 4.124238 AGGTGCATTAAATCATTGCATGC 58.876 39.130 11.82 11.82 46.90 4.06
3012 3041 3.872182 GGTGCATTAAATCATTGCATGCA 59.128 39.130 18.46 18.46 46.90 3.96
3013 3042 4.333095 GGTGCATTAAATCATTGCATGCAA 59.667 37.500 33.57 33.57 46.90 4.08
3014 3043 5.163744 GGTGCATTAAATCATTGCATGCAAA 60.164 36.000 34.84 21.31 46.90 3.68
3015 3044 6.459024 GGTGCATTAAATCATTGCATGCAAAT 60.459 34.615 34.84 22.58 46.90 2.32
3016 3045 7.254829 GGTGCATTAAATCATTGCATGCAAATA 60.255 33.333 34.84 25.30 46.90 1.40
3017 3046 8.286800 GTGCATTAAATCATTGCATGCAAATAT 58.713 29.630 34.84 26.25 46.90 1.28
3018 3047 8.841300 TGCATTAAATCATTGCATGCAAATATT 58.159 25.926 34.84 29.57 40.64 1.28
3027 3056 9.872721 TCATTGCATGCAAATATTAAGAGAAAA 57.127 25.926 34.84 8.63 39.55 2.29
3031 3060 9.872721 TGCATGCAAATATTAAGAGAAAATTGA 57.127 25.926 20.30 0.00 0.00 2.57
3041 3070 8.712285 ATTAAGAGAAAATTGACCAATGCATG 57.288 30.769 0.00 0.00 0.00 4.06
3042 3071 5.733620 AGAGAAAATTGACCAATGCATGT 57.266 34.783 0.00 0.00 0.00 3.21
3043 3072 6.839124 AGAGAAAATTGACCAATGCATGTA 57.161 33.333 0.00 0.00 0.00 2.29
3044 3073 6.624423 AGAGAAAATTGACCAATGCATGTAC 58.376 36.000 0.00 0.00 0.00 2.90
3045 3074 6.435277 AGAGAAAATTGACCAATGCATGTACT 59.565 34.615 0.00 0.00 0.00 2.73
3046 3075 6.996509 AGAAAATTGACCAATGCATGTACTT 58.003 32.000 0.00 0.00 0.00 2.24
3047 3076 7.444299 AGAAAATTGACCAATGCATGTACTTT 58.556 30.769 0.00 0.00 0.00 2.66
3048 3077 8.584157 AGAAAATTGACCAATGCATGTACTTTA 58.416 29.630 0.00 0.00 0.00 1.85
3049 3078 9.369904 GAAAATTGACCAATGCATGTACTTTAT 57.630 29.630 0.00 0.00 0.00 1.40
3050 3079 8.706492 AAATTGACCAATGCATGTACTTTATG 57.294 30.769 0.00 0.00 0.00 1.90
3051 3080 6.832520 TTGACCAATGCATGTACTTTATGT 57.167 33.333 0.00 0.00 0.00 2.29
3052 3081 7.929941 TTGACCAATGCATGTACTTTATGTA 57.070 32.000 0.00 0.00 0.00 2.29
3053 3082 8.518430 TTGACCAATGCATGTACTTTATGTAT 57.482 30.769 0.00 0.00 33.20 2.29
3054 3083 7.929159 TGACCAATGCATGTACTTTATGTATG 58.071 34.615 0.00 0.00 32.37 2.39
3055 3084 6.738114 ACCAATGCATGTACTTTATGTATGC 58.262 36.000 0.00 5.40 39.71 3.14
3063 3092 8.222984 CATGTACTTTATGTATGCATGCATTG 57.777 34.615 36.23 22.85 37.82 2.82
3079 3108 7.485418 CATGCATTGCAATTAATACATTGGT 57.515 32.000 16.46 0.00 43.62 3.67
3080 3109 8.590719 CATGCATTGCAATTAATACATTGGTA 57.409 30.769 16.46 0.00 43.62 3.25
3081 3110 9.043079 CATGCATTGCAATTAATACATTGGTAA 57.957 29.630 16.46 0.00 43.62 2.85
3082 3111 9.610705 ATGCATTGCAATTAATACATTGGTAAA 57.389 25.926 16.46 0.00 43.62 2.01
3083 3112 8.877779 TGCATTGCAATTAATACATTGGTAAAC 58.122 29.630 9.83 0.00 34.76 2.01
3084 3113 8.877779 GCATTGCAATTAATACATTGGTAAACA 58.122 29.630 9.83 0.00 35.07 2.83
3118 3147 9.912634 TTGAGAAAAACAAGAGCATTAATTAGG 57.087 29.630 0.00 0.00 0.00 2.69
3119 3148 9.077885 TGAGAAAAACAAGAGCATTAATTAGGT 57.922 29.630 0.00 0.00 0.00 3.08
3120 3149 9.346725 GAGAAAAACAAGAGCATTAATTAGGTG 57.653 33.333 0.00 0.00 0.00 4.00
3121 3150 7.814587 AGAAAAACAAGAGCATTAATTAGGTGC 59.185 33.333 13.92 13.92 39.10 5.01
3127 3156 4.907879 AGCATTAATTAGGTGCTTCTGC 57.092 40.909 17.06 5.11 46.29 4.26
3128 3157 4.272489 AGCATTAATTAGGTGCTTCTGCA 58.728 39.130 17.06 0.00 46.29 4.41
3144 3173 7.930513 GCTTCTGCAAACTACAAAAAGTATT 57.069 32.000 0.00 0.00 39.41 1.89
3145 3174 7.997071 GCTTCTGCAAACTACAAAAAGTATTC 58.003 34.615 0.00 0.00 39.41 1.75
3146 3175 7.114953 GCTTCTGCAAACTACAAAAAGTATTCC 59.885 37.037 0.00 0.00 39.41 3.01
3147 3176 7.575414 TCTGCAAACTACAAAAAGTATTCCA 57.425 32.000 0.00 0.00 30.93 3.53
3148 3177 7.422399 TCTGCAAACTACAAAAAGTATTCCAC 58.578 34.615 0.00 0.00 30.93 4.02
3149 3178 6.508777 TGCAAACTACAAAAAGTATTCCACC 58.491 36.000 0.00 0.00 30.93 4.61
3150 3179 6.096987 TGCAAACTACAAAAAGTATTCCACCA 59.903 34.615 0.00 0.00 30.93 4.17
3151 3180 6.419710 GCAAACTACAAAAAGTATTCCACCAC 59.580 38.462 0.00 0.00 30.93 4.16
3152 3181 7.683463 GCAAACTACAAAAAGTATTCCACCACT 60.683 37.037 0.00 0.00 30.93 4.00
3153 3182 7.506328 AACTACAAAAAGTATTCCACCACTC 57.494 36.000 0.00 0.00 30.93 3.51
3154 3183 6.597562 ACTACAAAAAGTATTCCACCACTCA 58.402 36.000 0.00 0.00 30.93 3.41
3155 3184 7.231467 ACTACAAAAAGTATTCCACCACTCAT 58.769 34.615 0.00 0.00 30.93 2.90
3156 3185 6.575162 ACAAAAAGTATTCCACCACTCATC 57.425 37.500 0.00 0.00 0.00 2.92
3157 3186 6.068010 ACAAAAAGTATTCCACCACTCATCA 58.932 36.000 0.00 0.00 0.00 3.07
3158 3187 6.721208 ACAAAAAGTATTCCACCACTCATCAT 59.279 34.615 0.00 0.00 0.00 2.45
3159 3188 7.094205 ACAAAAAGTATTCCACCACTCATCATC 60.094 37.037 0.00 0.00 0.00 2.92
3160 3189 5.965033 AAGTATTCCACCACTCATCATCT 57.035 39.130 0.00 0.00 0.00 2.90
3161 3190 7.437713 AAAGTATTCCACCACTCATCATCTA 57.562 36.000 0.00 0.00 0.00 1.98
3162 3191 6.412362 AGTATTCCACCACTCATCATCTAC 57.588 41.667 0.00 0.00 0.00 2.59
3163 3192 4.696479 ATTCCACCACTCATCATCTACC 57.304 45.455 0.00 0.00 0.00 3.18
3164 3193 3.404869 TCCACCACTCATCATCTACCT 57.595 47.619 0.00 0.00 0.00 3.08
3165 3194 3.724478 TCCACCACTCATCATCTACCTT 58.276 45.455 0.00 0.00 0.00 3.50
3166 3195 3.452264 TCCACCACTCATCATCTACCTTG 59.548 47.826 0.00 0.00 0.00 3.61
3167 3196 3.432749 CCACCACTCATCATCTACCTTGG 60.433 52.174 0.00 0.00 0.00 3.61
3168 3197 3.198635 CACCACTCATCATCTACCTTGGT 59.801 47.826 0.00 0.00 36.53 3.67
3169 3198 3.846588 ACCACTCATCATCTACCTTGGTT 59.153 43.478 0.00 0.00 31.99 3.67
3170 3199 4.194640 CCACTCATCATCTACCTTGGTTG 58.805 47.826 0.00 0.00 0.00 3.77
3171 3200 4.194640 CACTCATCATCTACCTTGGTTGG 58.805 47.826 0.00 0.00 0.00 3.77
3172 3201 3.846588 ACTCATCATCTACCTTGGTTGGT 59.153 43.478 0.00 0.00 43.66 3.67
3173 3202 4.194640 CTCATCATCTACCTTGGTTGGTG 58.805 47.826 7.94 7.94 41.05 4.17
3174 3203 3.843619 TCATCATCTACCTTGGTTGGTGA 59.156 43.478 16.81 16.81 41.05 4.02
3175 3204 3.981071 TCATCTACCTTGGTTGGTGAG 57.019 47.619 11.95 0.00 41.05 3.51
3176 3205 3.516586 TCATCTACCTTGGTTGGTGAGA 58.483 45.455 11.95 2.97 41.05 3.27
3177 3206 4.104086 TCATCTACCTTGGTTGGTGAGAT 58.896 43.478 11.95 5.00 41.05 2.75
3178 3207 4.536090 TCATCTACCTTGGTTGGTGAGATT 59.464 41.667 11.95 0.00 41.05 2.40
3179 3208 4.993705 TCTACCTTGGTTGGTGAGATTT 57.006 40.909 0.00 0.00 41.05 2.17
3180 3209 5.319043 TCTACCTTGGTTGGTGAGATTTT 57.681 39.130 0.00 0.00 41.05 1.82
3181 3210 5.701224 TCTACCTTGGTTGGTGAGATTTTT 58.299 37.500 0.00 0.00 41.05 1.94
3182 3211 4.670896 ACCTTGGTTGGTGAGATTTTTG 57.329 40.909 0.00 0.00 39.17 2.44
3183 3212 4.285863 ACCTTGGTTGGTGAGATTTTTGA 58.714 39.130 0.00 0.00 39.17 2.69
3184 3213 4.714308 ACCTTGGTTGGTGAGATTTTTGAA 59.286 37.500 0.00 0.00 39.17 2.69
3185 3214 5.366477 ACCTTGGTTGGTGAGATTTTTGAAT 59.634 36.000 0.00 0.00 39.17 2.57
3186 3215 6.126796 ACCTTGGTTGGTGAGATTTTTGAATT 60.127 34.615 0.00 0.00 39.17 2.17
3187 3216 6.203338 CCTTGGTTGGTGAGATTTTTGAATTG 59.797 38.462 0.00 0.00 0.00 2.32
3188 3217 6.477053 TGGTTGGTGAGATTTTTGAATTGA 57.523 33.333 0.00 0.00 0.00 2.57
3189 3218 6.514947 TGGTTGGTGAGATTTTTGAATTGAG 58.485 36.000 0.00 0.00 0.00 3.02
3190 3219 5.406477 GGTTGGTGAGATTTTTGAATTGAGC 59.594 40.000 0.00 0.00 0.00 4.26
3191 3220 5.138125 TGGTGAGATTTTTGAATTGAGCC 57.862 39.130 0.00 0.00 0.00 4.70
3192 3221 4.021192 TGGTGAGATTTTTGAATTGAGCCC 60.021 41.667 0.00 0.00 0.00 5.19
3193 3222 4.221482 GGTGAGATTTTTGAATTGAGCCCT 59.779 41.667 0.00 0.00 0.00 5.19
3194 3223 5.418840 GGTGAGATTTTTGAATTGAGCCCTA 59.581 40.000 0.00 0.00 0.00 3.53
3195 3224 6.097412 GGTGAGATTTTTGAATTGAGCCCTAT 59.903 38.462 0.00 0.00 0.00 2.57
3196 3225 7.285401 GGTGAGATTTTTGAATTGAGCCCTATA 59.715 37.037 0.00 0.00 0.00 1.31
3197 3226 8.686334 GTGAGATTTTTGAATTGAGCCCTATAA 58.314 33.333 0.00 0.00 0.00 0.98
3198 3227 9.253832 TGAGATTTTTGAATTGAGCCCTATAAA 57.746 29.630 0.00 0.00 0.00 1.40
3199 3228 9.521503 GAGATTTTTGAATTGAGCCCTATAAAC 57.478 33.333 0.00 0.00 0.00 2.01
3200 3229 8.478066 AGATTTTTGAATTGAGCCCTATAAACC 58.522 33.333 0.00 0.00 0.00 3.27
3201 3230 5.828299 TTTGAATTGAGCCCTATAAACCG 57.172 39.130 0.00 0.00 0.00 4.44
3202 3231 3.815809 TGAATTGAGCCCTATAAACCGG 58.184 45.455 0.00 0.00 0.00 5.28
3203 3232 3.456644 TGAATTGAGCCCTATAAACCGGA 59.543 43.478 9.46 0.00 0.00 5.14
3204 3233 4.080243 TGAATTGAGCCCTATAAACCGGAA 60.080 41.667 9.46 0.00 0.00 4.30
3205 3234 4.513406 ATTGAGCCCTATAAACCGGAAA 57.487 40.909 9.46 0.00 0.00 3.13
3206 3235 3.553828 TGAGCCCTATAAACCGGAAAG 57.446 47.619 9.46 0.00 0.00 2.62
3208 3237 2.436911 GAGCCCTATAAACCGGAAAGGA 59.563 50.000 9.46 0.00 45.00 3.36
3209 3238 2.438392 AGCCCTATAAACCGGAAAGGAG 59.562 50.000 9.46 0.00 45.00 3.69
3210 3239 2.486727 GCCCTATAAACCGGAAAGGAGG 60.487 54.545 9.46 9.03 45.00 4.30
3211 3240 2.105993 CCCTATAAACCGGAAAGGAGGG 59.894 54.545 9.46 14.71 45.00 4.30
3212 3241 3.043418 CCTATAAACCGGAAAGGAGGGA 58.957 50.000 9.46 0.00 45.00 4.20
3213 3242 3.071167 CCTATAAACCGGAAAGGAGGGAG 59.929 52.174 9.46 0.00 45.00 4.30
3537 3566 8.509690 TGTCTTTCTTTGCATTCTTCTATTCAG 58.490 33.333 0.00 0.00 0.00 3.02
3540 3569 9.766277 CTTTCTTTGCATTCTTCTATTCAGTAC 57.234 33.333 0.00 0.00 0.00 2.73
3648 3682 3.343617 GCTTATGCTGGGTACACTTTGA 58.656 45.455 0.00 0.00 36.03 2.69
3658 3692 3.306919 GGGTACACTTTGACCGATACCAA 60.307 47.826 0.00 0.00 36.51 3.67
3724 3758 5.009631 AGGTATACTTGCATTGTGCTCAAA 58.990 37.500 5.15 0.00 45.31 2.69
3733 3767 6.954616 TGCATTGTGCTCAAATTTCTATTG 57.045 33.333 5.15 0.00 45.31 1.90
3752 3786 9.480053 TTCTATTGCTTTGAATCTTTTTCCTTG 57.520 29.630 0.00 0.00 0.00 3.61
3763 3797 9.581099 TGAATCTTTTTCCTTGTTTTACTGTTC 57.419 29.630 0.00 0.00 0.00 3.18
3825 3860 3.558418 GGTTACTTTTGCGAGACAGTCAA 59.442 43.478 2.66 0.00 0.00 3.18
3851 3886 8.482128 ACTTTTGAAGGGTGTTCATTGAAATTA 58.518 29.630 0.00 0.00 0.00 1.40
3896 3931 8.231837 TCCTTATTCGAAGATTTTGGTTTTACG 58.768 33.333 3.35 0.00 35.04 3.18
3953 3988 2.103263 AGACGAGATATTCCTTGTGGCC 59.897 50.000 0.00 0.00 31.19 5.36
4314 4353 3.089284 CCGCCCTTTTTCTATCCAAAGT 58.911 45.455 0.00 0.00 0.00 2.66
4444 4483 3.517901 TGAACATGTTACTCCCTCCGATT 59.482 43.478 11.95 0.00 0.00 3.34
4467 4506 9.107367 GATTCATATTAATTGTCGCTGCTTTAC 57.893 33.333 0.00 0.00 0.00 2.01
4576 4615 8.431910 TCTACCTTGAATAATGTATAGGTCCC 57.568 38.462 0.00 0.00 37.24 4.46
4675 4759 9.149225 CTTATTATTAGCTGCATGACCTTCTAG 57.851 37.037 1.02 0.00 0.00 2.43
4691 4775 9.998106 TGACCTTCTAGGCATATATAGTTTTTC 57.002 33.333 0.00 0.00 39.63 2.29
4780 4864 4.569162 TGCACGTAATAACTCTGTAATGCC 59.431 41.667 0.00 0.00 0.00 4.40
4798 4882 4.898829 TGCCGTCTTATTGATGATTTGG 57.101 40.909 0.00 0.00 33.63 3.28
4884 4973 2.096819 TGACGAAAACAACCTTGTCTGC 59.903 45.455 0.00 0.00 41.31 4.26
4949 5038 1.953686 GGTGGCAGCTTTGTCTGTTTA 59.046 47.619 9.90 0.00 36.49 2.01
4970 5059 2.306805 ACATGAACAAGAGGAGATGCCA 59.693 45.455 0.00 0.00 40.02 4.92
4992 5081 1.140312 ACTGAAAGAAGTGGCCCTCA 58.860 50.000 0.00 0.00 37.43 3.86
5011 5100 3.937706 CTCAACATACTTCCTTCTGCCTG 59.062 47.826 0.00 0.00 0.00 4.85
5012 5101 3.582647 TCAACATACTTCCTTCTGCCTGA 59.417 43.478 0.00 0.00 0.00 3.86
5016 5105 4.762251 ACATACTTCCTTCTGCCTGAAAAC 59.238 41.667 0.00 0.00 33.79 2.43
5022 5111 2.555757 CCTTCTGCCTGAAAACTTCCTG 59.444 50.000 0.00 0.00 33.79 3.86
5042 5131 4.528596 CCTGGAGTTACCTCTCAGAGAAAA 59.471 45.833 2.09 0.00 37.81 2.29
5075 5164 9.703677 AAATAAATATCCTAAAGAAAACGGGGA 57.296 29.630 0.00 0.00 0.00 4.81
5193 5290 7.040062 TGTTGTGGAGGACATAAAATTTAGGTG 60.040 37.037 7.82 0.00 33.40 4.00
5328 5425 2.299867 CACCTGTGGGGAATTGGAAAAG 59.700 50.000 0.00 0.00 38.76 2.27
5450 5547 8.993121 CATCCTTGTGTATATCTATGTGGAAAC 58.007 37.037 0.00 0.00 0.00 2.78
5463 5560 7.901029 TCTATGTGGAAACAGATCCTGATATC 58.099 38.462 0.45 0.00 41.05 1.63
5474 5571 1.674057 CTGATATCGGGGGTGAGGC 59.326 63.158 3.36 0.00 0.00 4.70
5542 5639 1.194781 TCTTCCCCTTTGAGCTCGCT 61.195 55.000 9.64 0.00 0.00 4.93
5564 5661 2.038387 GGAAGTGTAACATCCGGCAT 57.962 50.000 0.00 0.00 45.59 4.40
5569 5666 2.124903 GTGTAACATCCGGCATACTCG 58.875 52.381 0.00 0.00 36.32 4.18
5636 5733 4.323562 GCCTAAGCTAAAAGGTGAGGAGAA 60.324 45.833 12.81 0.00 45.45 2.87
5777 5874 1.610363 TATAGCGAGACCTGGCTCTG 58.390 55.000 9.76 9.53 43.58 3.35
5809 5906 5.886960 AGTTGAAATCTTCATGCTACCAC 57.113 39.130 0.00 0.00 39.84 4.16
5883 5980 1.881973 TGAAATGCAGAAGTGTGAGGC 59.118 47.619 0.00 0.00 0.00 4.70
5899 5996 7.493367 AGTGTGAGGCAGTAGTATTAAATCTC 58.507 38.462 0.00 0.00 0.00 2.75
5901 5998 8.630917 GTGTGAGGCAGTAGTATTAAATCTCTA 58.369 37.037 0.00 0.00 0.00 2.43
5902 5999 8.630917 TGTGAGGCAGTAGTATTAAATCTCTAC 58.369 37.037 0.00 0.00 34.72 2.59
5906 6003 9.299465 AGGCAGTAGTATTAAATCTCTACTACC 57.701 37.037 15.14 14.74 44.47 3.18
5907 6004 9.299465 GGCAGTAGTATTAAATCTCTACTACCT 57.701 37.037 15.14 5.34 44.47 3.08
5918 6015 8.999220 AAATCTCTACTACCTAAAAGAAACGG 57.001 34.615 0.00 0.00 0.00 4.44
5920 6017 7.765695 TCTCTACTACCTAAAAGAAACGGAA 57.234 36.000 0.00 0.00 0.00 4.30
5921 6018 7.597386 TCTCTACTACCTAAAAGAAACGGAAC 58.403 38.462 0.00 0.00 0.00 3.62
5937 6034 3.881334 ACGTTCCGTTTCCCCTCT 58.119 55.556 0.00 0.00 36.35 3.69
5939 6036 1.341080 ACGTTCCGTTTCCCCTCTTA 58.659 50.000 0.00 0.00 36.35 2.10
5940 6037 1.001293 ACGTTCCGTTTCCCCTCTTAC 59.999 52.381 0.00 0.00 36.35 2.34
5941 6038 1.718396 GTTCCGTTTCCCCTCTTACG 58.282 55.000 0.00 0.00 0.00 3.18
5942 6039 1.001293 GTTCCGTTTCCCCTCTTACGT 59.999 52.381 0.00 0.00 32.45 3.57
5943 6040 0.890683 TCCGTTTCCCCTCTTACGTC 59.109 55.000 0.00 0.00 32.45 4.34
5944 6041 0.457337 CCGTTTCCCCTCTTACGTCG 60.457 60.000 0.00 0.00 32.45 5.12
5946 6043 1.730446 CGTTTCCCCTCTTACGTCGTC 60.730 57.143 0.00 0.00 0.00 4.20
5947 6044 0.523072 TTTCCCCTCTTACGTCGTCG 59.477 55.000 0.00 0.00 43.34 5.12
5948 6045 0.321564 TTCCCCTCTTACGTCGTCGA 60.322 55.000 9.47 0.00 40.62 4.20
5949 6046 0.107508 TCCCCTCTTACGTCGTCGAT 60.108 55.000 9.47 0.00 40.62 3.59
5950 6047 0.307146 CCCCTCTTACGTCGTCGATC 59.693 60.000 9.47 0.00 40.62 3.69
5951 6048 1.297664 CCCTCTTACGTCGTCGATCT 58.702 55.000 9.47 0.00 40.62 2.75
5952 6049 1.669779 CCCTCTTACGTCGTCGATCTT 59.330 52.381 9.47 0.00 40.62 2.40
5953 6050 2.286301 CCCTCTTACGTCGTCGATCTTC 60.286 54.545 9.47 0.00 40.62 2.87
5954 6051 2.597040 CCTCTTACGTCGTCGATCTTCG 60.597 54.545 9.47 0.00 42.10 3.79
5956 6053 2.028523 TCTTACGTCGTCGATCTTCGTC 59.971 50.000 9.47 0.00 41.35 4.20
5957 6054 0.647410 TACGTCGTCGATCTTCGTCC 59.353 55.000 9.47 0.00 41.35 4.79
5958 6055 1.293963 ACGTCGTCGATCTTCGTCCA 61.294 55.000 9.47 0.00 41.35 4.02
5961 6058 1.586564 CGTCGATCTTCGTCCAGCC 60.587 63.158 0.00 0.00 41.35 4.85
5962 6059 1.810532 GTCGATCTTCGTCCAGCCT 59.189 57.895 0.00 0.00 41.35 4.58
5963 6060 0.173708 GTCGATCTTCGTCCAGCCTT 59.826 55.000 0.00 0.00 41.35 4.35
5968 6065 1.807573 CTTCGTCCAGCCTTCGCTC 60.808 63.158 0.00 0.00 43.95 5.03
5969 6066 3.626680 TTCGTCCAGCCTTCGCTCG 62.627 63.158 0.00 0.00 43.95 5.03
5971 6068 2.048127 GTCCAGCCTTCGCTCGTT 60.048 61.111 0.00 0.00 43.95 3.85
5972 6069 1.668151 GTCCAGCCTTCGCTCGTTT 60.668 57.895 0.00 0.00 43.95 3.60
5973 6070 1.374252 TCCAGCCTTCGCTCGTTTC 60.374 57.895 0.00 0.00 43.95 2.78
5974 6071 2.730672 CCAGCCTTCGCTCGTTTCG 61.731 63.158 0.00 0.00 43.95 3.46
5975 6072 2.022129 CAGCCTTCGCTCGTTTCGT 61.022 57.895 0.00 0.00 43.95 3.85
5976 6073 1.300697 AGCCTTCGCTCGTTTCGTT 60.301 52.632 0.00 0.00 43.95 3.85
5977 6074 1.154654 GCCTTCGCTCGTTTCGTTG 60.155 57.895 0.00 0.00 0.00 4.10
5979 6076 0.161024 CCTTCGCTCGTTTCGTTGTC 59.839 55.000 0.00 0.00 0.00 3.18
5980 6077 0.161024 CTTCGCTCGTTTCGTTGTCC 59.839 55.000 0.00 0.00 0.00 4.02
5982 6079 1.663702 CGCTCGTTTCGTTGTCCCT 60.664 57.895 0.00 0.00 0.00 4.20
5985 6082 0.859232 CTCGTTTCGTTGTCCCTGTG 59.141 55.000 0.00 0.00 0.00 3.66
5986 6083 0.531090 TCGTTTCGTTGTCCCTGTGG 60.531 55.000 0.00 0.00 0.00 4.17
5987 6084 1.652563 GTTTCGTTGTCCCTGTGGC 59.347 57.895 0.00 0.00 0.00 5.01
5988 6085 1.527380 TTTCGTTGTCCCTGTGGCC 60.527 57.895 0.00 0.00 0.00 5.36
5989 6086 2.272230 TTTCGTTGTCCCTGTGGCCA 62.272 55.000 0.00 0.00 0.00 5.36
5990 6087 2.669569 CGTTGTCCCTGTGGCCAG 60.670 66.667 5.11 0.00 38.50 4.85
5992 6089 4.641645 TTGTCCCTGTGGCCAGCG 62.642 66.667 5.11 0.00 37.38 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 109 7.335171 TGTGTATTGTCATTTGATGAGAAGGAG 59.665 37.037 6.64 0.00 44.33 3.69
217 218 1.002888 CACAGACTGCCAGAGTTCCAT 59.997 52.381 0.00 0.00 33.83 3.41
349 350 0.951040 GAACAGGCTCCAACACCTCG 60.951 60.000 0.00 0.00 32.56 4.63
425 427 0.824109 TTGATGGCTCCAGTACCTCG 59.176 55.000 0.00 0.00 0.00 4.63
506 508 3.605749 TACCACTGCGCCAAGGCTC 62.606 63.158 4.18 1.20 39.32 4.70
507 509 2.690653 TTTACCACTGCGCCAAGGCT 62.691 55.000 4.18 0.00 39.32 4.58
508 510 2.200170 CTTTACCACTGCGCCAAGGC 62.200 60.000 4.18 0.00 37.85 4.35
509 511 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
510 512 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
511 513 1.228124 AGCTTTACCACTGCGCCAA 60.228 52.632 4.18 0.00 0.00 4.52
512 514 1.965930 CAGCTTTACCACTGCGCCA 60.966 57.895 4.18 0.00 0.00 5.69
513 515 2.870372 CAGCTTTACCACTGCGCC 59.130 61.111 4.18 0.00 0.00 6.53
517 519 0.607489 AGGCAGCAGCTTTACCACTG 60.607 55.000 0.00 0.00 41.70 3.66
518 520 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
519 521 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
520 522 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
521 523 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
522 524 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
523 525 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
524 526 1.458639 GGTCACAAGGCAGCAGCTTT 61.459 55.000 0.00 0.00 41.17 3.51
525 527 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
526 528 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
527 529 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
528 530 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
529 531 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
530 532 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
531 533 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
532 534 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
544 546 2.025887 GGACTTGAACCCATGACCTCAT 60.026 50.000 0.00 0.00 36.96 2.90
545 547 1.351017 GGACTTGAACCCATGACCTCA 59.649 52.381 0.00 0.00 32.45 3.86
546 548 1.630878 AGGACTTGAACCCATGACCTC 59.369 52.381 0.00 0.00 37.82 3.85
547 549 1.352352 CAGGACTTGAACCCATGACCT 59.648 52.381 0.00 0.00 40.96 3.85
548 550 1.614317 CCAGGACTTGAACCCATGACC 60.614 57.143 0.00 0.00 34.29 4.02
549 551 1.351017 TCCAGGACTTGAACCCATGAC 59.649 52.381 0.00 0.00 0.00 3.06
550 552 1.741028 TCCAGGACTTGAACCCATGA 58.259 50.000 0.00 0.00 0.00 3.07
551 553 2.558359 GTTTCCAGGACTTGAACCCATG 59.442 50.000 0.00 0.00 0.00 3.66
552 554 2.176798 TGTTTCCAGGACTTGAACCCAT 59.823 45.455 0.00 0.00 0.00 4.00
553 555 1.566703 TGTTTCCAGGACTTGAACCCA 59.433 47.619 0.00 0.00 0.00 4.51
554 556 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
555 557 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
556 558 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
557 559 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
558 560 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
559 561 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
560 562 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
561 563 1.439543 AAGAGGCTGTTTCCAGGACT 58.560 50.000 0.00 0.00 39.22 3.85
562 564 2.038557 TGTAAGAGGCTGTTTCCAGGAC 59.961 50.000 0.90 0.00 39.22 3.85
563 565 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
564 566 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
565 567 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
577 579 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
578 580 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
579 581 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
580 582 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
581 583 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
582 584 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
583 585 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
584 586 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
585 587 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
586 588 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
587 589 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
588 590 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
589 591 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
590 592 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
591 593 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
592 594 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
593 595 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
594 596 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
595 597 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
596 598 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
597 599 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
598 600 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
599 601 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
600 602 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
601 603 3.131577 CCACTTTGGGTCTATAGTACGCA 59.868 47.826 13.98 13.98 37.94 5.24
602 604 3.131755 ACCACTTTGGGTCTATAGTACGC 59.868 47.826 0.00 6.13 43.37 4.42
603 605 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
613 615 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
614 616 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
615 617 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
616 618 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
617 619 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
618 620 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
619 621 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
620 622 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
621 623 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
622 624 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
623 625 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
624 626 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
625 627 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
626 628 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
627 629 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
628 630 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
629 631 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
630 632 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
631 633 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
643 645 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
646 648 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
647 649 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
648 650 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
649 651 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
655 657 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
656 658 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
657 659 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
658 660 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
659 661 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
671 673 6.091305 GCTGAGAAATGAATAAAAAGGGCAAC 59.909 38.462 0.00 0.00 0.00 4.17
672 674 6.165577 GCTGAGAAATGAATAAAAAGGGCAA 58.834 36.000 0.00 0.00 0.00 4.52
673 675 5.245751 TGCTGAGAAATGAATAAAAAGGGCA 59.754 36.000 0.00 0.00 0.00 5.36
674 676 5.723295 TGCTGAGAAATGAATAAAAAGGGC 58.277 37.500 0.00 0.00 0.00 5.19
675 677 8.090214 TCTTTGCTGAGAAATGAATAAAAAGGG 58.910 33.333 0.00 0.00 0.00 3.95
676 678 9.136952 CTCTTTGCTGAGAAATGAATAAAAAGG 57.863 33.333 0.00 0.00 36.23 3.11
677 679 9.688592 ACTCTTTGCTGAGAAATGAATAAAAAG 57.311 29.630 8.49 0.00 37.50 2.27
678 680 9.683069 GACTCTTTGCTGAGAAATGAATAAAAA 57.317 29.630 8.49 0.00 37.50 1.94
679 681 8.849168 TGACTCTTTGCTGAGAAATGAATAAAA 58.151 29.630 8.49 0.00 37.50 1.52
680 682 8.394971 TGACTCTTTGCTGAGAAATGAATAAA 57.605 30.769 8.49 0.00 37.50 1.40
681 683 7.879677 TCTGACTCTTTGCTGAGAAATGAATAA 59.120 33.333 8.49 0.00 37.50 1.40
682 684 7.389232 TCTGACTCTTTGCTGAGAAATGAATA 58.611 34.615 8.49 0.00 37.50 1.75
683 685 6.236409 TCTGACTCTTTGCTGAGAAATGAAT 58.764 36.000 8.49 0.00 37.50 2.57
684 686 5.614308 TCTGACTCTTTGCTGAGAAATGAA 58.386 37.500 8.49 0.00 37.50 2.57
685 687 5.219343 TCTGACTCTTTGCTGAGAAATGA 57.781 39.130 8.49 0.00 37.50 2.57
686 688 4.996122 ACTCTGACTCTTTGCTGAGAAATG 59.004 41.667 0.00 0.00 37.50 2.32
687 689 5.226194 ACTCTGACTCTTTGCTGAGAAAT 57.774 39.130 0.00 0.00 37.50 2.17
688 690 4.679373 ACTCTGACTCTTTGCTGAGAAA 57.321 40.909 0.00 0.00 37.50 2.52
689 691 4.679373 AACTCTGACTCTTTGCTGAGAA 57.321 40.909 0.00 0.00 37.50 2.87
690 692 4.343526 AGAAACTCTGACTCTTTGCTGAGA 59.656 41.667 0.00 0.13 37.50 3.27
691 693 4.630111 AGAAACTCTGACTCTTTGCTGAG 58.370 43.478 0.00 0.00 39.78 3.35
692 694 4.100035 TGAGAAACTCTGACTCTTTGCTGA 59.900 41.667 0.00 0.00 0.00 4.26
693 695 4.375272 TGAGAAACTCTGACTCTTTGCTG 58.625 43.478 0.00 0.00 0.00 4.41
694 696 4.630111 CTGAGAAACTCTGACTCTTTGCT 58.370 43.478 0.00 0.00 32.36 3.91
695 697 3.186205 GCTGAGAAACTCTGACTCTTTGC 59.814 47.826 9.23 0.00 32.36 3.68
696 698 4.375272 TGCTGAGAAACTCTGACTCTTTG 58.625 43.478 9.23 0.00 32.36 2.77
697 699 4.679373 TGCTGAGAAACTCTGACTCTTT 57.321 40.909 9.23 0.00 32.36 2.52
698 700 4.343526 TCTTGCTGAGAAACTCTGACTCTT 59.656 41.667 9.23 0.00 32.36 2.85
699 701 3.894427 TCTTGCTGAGAAACTCTGACTCT 59.106 43.478 9.23 0.00 32.36 3.24
726 728 8.739972 CCTAAAATATTGATATAGTGGGCCAAC 58.260 37.037 8.40 0.26 0.00 3.77
813 817 3.150848 TGTCATGACAGCGACATCTAC 57.849 47.619 24.56 0.00 37.23 2.59
894 898 4.024809 GGAAATTGCTATCGAAGTACCAGC 60.025 45.833 0.00 0.00 0.00 4.85
1055 1059 2.088423 CTACTTGTTTATGCGGGGCAA 58.912 47.619 0.00 0.00 43.62 4.52
1075 1079 8.409358 AAATATATAGCTTGTTTGGGATGGTC 57.591 34.615 0.00 0.00 0.00 4.02
1101 1105 9.608718 TCAAATTTAAAGGGAAAGAAAGGGATA 57.391 29.630 0.00 0.00 0.00 2.59
1408 1412 7.777910 ACTAATATAGGCATGTAAAACTGGCAA 59.222 33.333 0.00 0.00 40.18 4.52
1445 1453 4.110824 TGAGATGCAGGGCCCATATATTA 58.889 43.478 27.56 6.24 0.00 0.98
1446 1454 2.921612 TGAGATGCAGGGCCCATATATT 59.078 45.455 27.56 4.82 0.00 1.28
1447 1455 2.565631 TGAGATGCAGGGCCCATATAT 58.434 47.619 27.56 12.32 0.00 0.86
1448 1456 2.043307 TGAGATGCAGGGCCCATATA 57.957 50.000 27.56 7.62 0.00 0.86
1472 1480 3.900966 TCATCTCAAGTACAGCTGCAT 57.099 42.857 15.27 0.00 0.00 3.96
1549 1557 7.821359 ACAAATGGCATAGCTAGTATACAGATG 59.179 37.037 0.00 2.50 0.00 2.90
1602 1610 1.335597 GCAAAGTAGGCCACCGAAAAC 60.336 52.381 5.01 0.00 0.00 2.43
1603 1611 0.955905 GCAAAGTAGGCCACCGAAAA 59.044 50.000 5.01 0.00 0.00 2.29
1632 1640 6.300703 ACCACTCTACTGCTTATCTAGGTAG 58.699 44.000 0.00 0.00 33.37 3.18
1678 1686 9.062524 GTAGCCCAATTGAATATGTAACATGTA 57.937 33.333 7.12 0.00 0.00 2.29
1679 1687 7.014230 GGTAGCCCAATTGAATATGTAACATGT 59.986 37.037 7.12 0.00 0.00 3.21
1736 1744 1.643880 AAAATGCTGCGCCTAAATGC 58.356 45.000 4.18 0.00 0.00 3.56
1792 1800 1.059098 ATCTGCCTGACAACTGTCCA 58.941 50.000 7.37 0.00 44.15 4.02
1839 1847 4.922206 TGAAACTCCAAATATCAGCACCT 58.078 39.130 0.00 0.00 0.00 4.00
1885 1893 5.431765 TGAAGGGAAGATTGTAGATCTTGC 58.568 41.667 0.00 10.60 43.08 4.01
1898 1906 1.207791 GGATGGAGCTGAAGGGAAGA 58.792 55.000 0.00 0.00 0.00 2.87
1902 1910 0.914644 TCTTGGATGGAGCTGAAGGG 59.085 55.000 0.00 0.00 0.00 3.95
2068 2076 1.988107 TCTCAAGGAGCCCTTCATTGT 59.012 47.619 3.71 0.00 45.38 2.71
2290 2301 0.542333 GAAGGACCAGGAGTTAGGCC 59.458 60.000 0.00 0.00 0.00 5.19
2363 2381 2.289565 GCTATCCAGCCAAGTGGTAAC 58.710 52.381 0.00 0.00 42.37 2.50
2397 2415 7.696872 GGTGAAAGTACAAAGAGAAGAACAAAC 59.303 37.037 0.00 0.00 0.00 2.93
2559 2588 7.767250 TCCAGTCTACATTATCCAGATACAG 57.233 40.000 0.00 0.00 0.00 2.74
2560 2589 9.467796 CTATCCAGTCTACATTATCCAGATACA 57.532 37.037 0.00 0.00 0.00 2.29
2561 2590 9.688091 TCTATCCAGTCTACATTATCCAGATAC 57.312 37.037 0.00 0.00 0.00 2.24
2563 2592 9.781425 ATTCTATCCAGTCTACATTATCCAGAT 57.219 33.333 0.00 0.00 0.00 2.90
2564 2593 9.249053 GATTCTATCCAGTCTACATTATCCAGA 57.751 37.037 0.00 0.00 0.00 3.86
2697 2726 5.778161 CACTAAGTGCATTGTTCGTCATA 57.222 39.130 0.00 0.00 0.00 2.15
2728 2757 9.599322 CAAAAGAAACACTGTTATACAAGCTAG 57.401 33.333 0.00 0.00 0.00 3.42
2752 2781 7.165460 ACATCATTCATGCATCTTCTTTCAA 57.835 32.000 0.00 0.00 35.65 2.69
2796 2825 7.766283 GCTTCTTTAGCCTGAAATCACTAAAT 58.234 34.615 6.66 0.00 44.48 1.40
2798 2827 6.743575 GCTTCTTTAGCCTGAAATCACTAA 57.256 37.500 0.00 0.00 44.48 2.24
2889 2918 2.034436 AAACCGGAAAGGAGGGAGTA 57.966 50.000 9.46 0.00 45.00 2.59
2890 2919 2.034436 TAAACCGGAAAGGAGGGAGT 57.966 50.000 9.46 0.00 45.00 3.85
2891 2920 3.071167 CCTATAAACCGGAAAGGAGGGAG 59.929 52.174 9.46 0.00 45.00 4.30
2892 2921 3.043418 CCTATAAACCGGAAAGGAGGGA 58.957 50.000 9.46 0.00 45.00 4.20
2893 2922 2.105993 CCCTATAAACCGGAAAGGAGGG 59.894 54.545 9.46 14.71 45.00 4.30
2894 2923 2.486727 GCCCTATAAACCGGAAAGGAGG 60.487 54.545 9.46 9.03 45.00 4.30
2895 2924 2.438392 AGCCCTATAAACCGGAAAGGAG 59.562 50.000 9.46 0.00 45.00 3.69
2896 2925 2.484602 AGCCCTATAAACCGGAAAGGA 58.515 47.619 9.46 0.00 45.00 3.36
2898 2927 5.866207 AGATAAGCCCTATAAACCGGAAAG 58.134 41.667 9.46 0.00 0.00 2.62
2899 2928 5.367352 TGAGATAAGCCCTATAAACCGGAAA 59.633 40.000 9.46 0.00 0.00 3.13
2900 2929 4.903049 TGAGATAAGCCCTATAAACCGGAA 59.097 41.667 9.46 0.00 0.00 4.30
2901 2930 4.485875 TGAGATAAGCCCTATAAACCGGA 58.514 43.478 9.46 0.00 0.00 5.14
2902 2931 4.884668 TGAGATAAGCCCTATAAACCGG 57.115 45.455 0.00 0.00 0.00 5.28
2903 2932 7.745620 ATTTTGAGATAAGCCCTATAAACCG 57.254 36.000 0.00 0.00 0.00 4.44
2904 2933 9.967346 GAAATTTTGAGATAAGCCCTATAAACC 57.033 33.333 0.00 0.00 0.00 3.27
2907 2936 9.920946 ACTGAAATTTTGAGATAAGCCCTATAA 57.079 29.630 2.47 0.00 0.00 0.98
2908 2937 9.920946 AACTGAAATTTTGAGATAAGCCCTATA 57.079 29.630 2.47 0.00 0.00 1.31
2909 2938 8.829373 AACTGAAATTTTGAGATAAGCCCTAT 57.171 30.769 2.47 0.00 0.00 2.57
2910 2939 8.650143 AAACTGAAATTTTGAGATAAGCCCTA 57.350 30.769 2.47 0.00 0.00 3.53
2911 2940 7.544804 AAACTGAAATTTTGAGATAAGCCCT 57.455 32.000 2.47 0.00 0.00 5.19
2912 2941 8.607441 AAAAACTGAAATTTTGAGATAAGCCC 57.393 30.769 2.47 0.00 32.12 5.19
2913 2942 8.712363 GGAAAAACTGAAATTTTGAGATAAGCC 58.288 33.333 2.47 0.00 32.12 4.35
2914 2943 9.260002 TGGAAAAACTGAAATTTTGAGATAAGC 57.740 29.630 2.47 0.00 32.12 3.09
2927 2956 9.705290 GAGCCTTATAAAATGGAAAAACTGAAA 57.295 29.630 0.00 0.00 0.00 2.69
2928 2957 8.865090 TGAGCCTTATAAAATGGAAAAACTGAA 58.135 29.630 0.00 0.00 0.00 3.02
2929 2958 8.415950 TGAGCCTTATAAAATGGAAAAACTGA 57.584 30.769 0.00 0.00 0.00 3.41
2930 2959 9.657419 ATTGAGCCTTATAAAATGGAAAAACTG 57.343 29.630 0.00 0.00 0.00 3.16
2935 2964 9.432982 ACCATATTGAGCCTTATAAAATGGAAA 57.567 29.630 4.63 0.00 35.88 3.13
2936 2965 9.432982 AACCATATTGAGCCTTATAAAATGGAA 57.567 29.630 4.63 0.00 35.88 3.53
2937 2966 8.859090 CAACCATATTGAGCCTTATAAAATGGA 58.141 33.333 4.63 0.00 35.88 3.41
2938 2967 8.641541 ACAACCATATTGAGCCTTATAAAATGG 58.358 33.333 0.00 0.00 37.85 3.16
2941 2970 8.691797 GGAACAACCATATTGAGCCTTATAAAA 58.308 33.333 0.00 0.00 38.79 1.52
2942 2971 7.286775 GGGAACAACCATATTGAGCCTTATAAA 59.713 37.037 0.00 0.00 41.20 1.40
2943 2972 6.775629 GGGAACAACCATATTGAGCCTTATAA 59.224 38.462 0.00 0.00 41.20 0.98
2944 2973 6.303839 GGGAACAACCATATTGAGCCTTATA 58.696 40.000 0.00 0.00 41.20 0.98
2945 2974 5.140454 GGGAACAACCATATTGAGCCTTAT 58.860 41.667 0.00 0.00 41.20 1.73
2946 2975 4.532834 GGGAACAACCATATTGAGCCTTA 58.467 43.478 0.00 0.00 41.20 2.69
2947 2976 3.365472 GGGAACAACCATATTGAGCCTT 58.635 45.455 0.00 0.00 41.20 4.35
2948 2977 2.358195 GGGGAACAACCATATTGAGCCT 60.358 50.000 0.00 0.00 41.20 4.58
2949 2978 2.031870 GGGGAACAACCATATTGAGCC 58.968 52.381 0.00 0.00 41.20 4.70
2950 2979 2.733956 TGGGGAACAACCATATTGAGC 58.266 47.619 0.00 0.00 41.20 4.26
2970 2999 5.126061 GCACCTTGGAATCTGAACATGTAAT 59.874 40.000 0.00 0.00 0.00 1.89
2971 3000 4.458989 GCACCTTGGAATCTGAACATGTAA 59.541 41.667 0.00 0.00 0.00 2.41
2972 3001 4.009675 GCACCTTGGAATCTGAACATGTA 58.990 43.478 0.00 0.00 0.00 2.29
2973 3002 2.821969 GCACCTTGGAATCTGAACATGT 59.178 45.455 0.00 0.00 0.00 3.21
2974 3003 2.821378 TGCACCTTGGAATCTGAACATG 59.179 45.455 0.00 0.00 0.00 3.21
2975 3004 3.159213 TGCACCTTGGAATCTGAACAT 57.841 42.857 0.00 0.00 0.00 2.71
2976 3005 2.655090 TGCACCTTGGAATCTGAACA 57.345 45.000 0.00 0.00 0.00 3.18
2977 3006 5.643379 TTAATGCACCTTGGAATCTGAAC 57.357 39.130 0.00 0.00 0.00 3.18
2978 3007 6.436847 TGATTTAATGCACCTTGGAATCTGAA 59.563 34.615 0.00 0.00 0.00 3.02
2979 3008 5.951148 TGATTTAATGCACCTTGGAATCTGA 59.049 36.000 0.00 0.00 0.00 3.27
2980 3009 6.211587 TGATTTAATGCACCTTGGAATCTG 57.788 37.500 0.00 0.00 0.00 2.90
2981 3010 7.270047 CAATGATTTAATGCACCTTGGAATCT 58.730 34.615 0.00 0.00 0.00 2.40
2982 3011 6.018507 GCAATGATTTAATGCACCTTGGAATC 60.019 38.462 0.00 0.00 39.81 2.52
2983 3012 5.818857 GCAATGATTTAATGCACCTTGGAAT 59.181 36.000 0.00 0.00 39.81 3.01
2984 3013 5.177326 GCAATGATTTAATGCACCTTGGAA 58.823 37.500 0.00 0.00 39.81 3.53
2985 3014 4.222366 TGCAATGATTTAATGCACCTTGGA 59.778 37.500 0.00 0.00 44.52 3.53
2986 3015 4.505808 TGCAATGATTTAATGCACCTTGG 58.494 39.130 0.00 0.00 44.52 3.61
3005 3034 9.872721 TCAATTTTCTCTTAATATTTGCATGCA 57.127 25.926 18.46 18.46 0.00 3.96
3015 3044 9.806203 CATGCATTGGTCAATTTTCTCTTAATA 57.194 29.630 0.00 0.00 0.00 0.98
3016 3045 8.316214 ACATGCATTGGTCAATTTTCTCTTAAT 58.684 29.630 0.00 0.00 0.00 1.40
3017 3046 7.669427 ACATGCATTGGTCAATTTTCTCTTAA 58.331 30.769 0.00 0.00 0.00 1.85
3018 3047 7.230849 ACATGCATTGGTCAATTTTCTCTTA 57.769 32.000 0.00 0.00 0.00 2.10
3019 3048 6.105397 ACATGCATTGGTCAATTTTCTCTT 57.895 33.333 0.00 0.00 0.00 2.85
3020 3049 5.733620 ACATGCATTGGTCAATTTTCTCT 57.266 34.783 0.00 0.00 0.00 3.10
3021 3050 6.624423 AGTACATGCATTGGTCAATTTTCTC 58.376 36.000 0.00 0.00 0.00 2.87
3022 3051 6.594788 AGTACATGCATTGGTCAATTTTCT 57.405 33.333 0.00 0.00 0.00 2.52
3023 3052 7.656707 AAAGTACATGCATTGGTCAATTTTC 57.343 32.000 0.00 0.00 0.00 2.29
3024 3053 9.153721 CATAAAGTACATGCATTGGTCAATTTT 57.846 29.630 0.00 0.00 0.00 1.82
3025 3054 8.313292 ACATAAAGTACATGCATTGGTCAATTT 58.687 29.630 0.00 0.00 0.00 1.82
3026 3055 7.839907 ACATAAAGTACATGCATTGGTCAATT 58.160 30.769 0.00 0.00 0.00 2.32
3027 3056 7.408756 ACATAAAGTACATGCATTGGTCAAT 57.591 32.000 0.00 0.00 0.00 2.57
3028 3057 6.832520 ACATAAAGTACATGCATTGGTCAA 57.167 33.333 0.00 0.00 0.00 3.18
3029 3058 7.468494 GCATACATAAAGTACATGCATTGGTCA 60.468 37.037 0.00 0.00 40.39 4.02
3030 3059 6.857964 GCATACATAAAGTACATGCATTGGTC 59.142 38.462 0.00 0.00 40.39 4.02
3031 3060 6.320926 TGCATACATAAAGTACATGCATTGGT 59.679 34.615 9.88 0.00 43.64 3.67
3032 3061 6.737118 TGCATACATAAAGTACATGCATTGG 58.263 36.000 9.88 0.00 43.64 3.16
3038 3067 8.222984 CAATGCATGCATACATAAAGTACATG 57.777 34.615 32.36 17.92 38.90 3.21
3055 3084 7.485418 ACCAATGTATTAATTGCAATGCATG 57.515 32.000 13.82 0.00 39.41 4.06
3056 3085 9.610705 TTTACCAATGTATTAATTGCAATGCAT 57.389 25.926 13.82 10.48 41.27 3.96
3057 3086 8.877779 GTTTACCAATGTATTAATTGCAATGCA 58.122 29.630 13.82 2.72 36.42 3.96
3058 3087 8.877779 TGTTTACCAATGTATTAATTGCAATGC 58.122 29.630 13.82 0.00 36.42 3.56
3092 3121 9.912634 CCTAATTAATGCTCTTGTTTTTCTCAA 57.087 29.630 0.00 0.00 0.00 3.02
3093 3122 9.077885 ACCTAATTAATGCTCTTGTTTTTCTCA 57.922 29.630 0.00 0.00 0.00 3.27
3094 3123 9.346725 CACCTAATTAATGCTCTTGTTTTTCTC 57.653 33.333 0.00 0.00 0.00 2.87
3095 3124 7.814587 GCACCTAATTAATGCTCTTGTTTTTCT 59.185 33.333 12.17 0.00 36.40 2.52
3096 3125 7.814587 AGCACCTAATTAATGCTCTTGTTTTTC 59.185 33.333 15.10 0.00 46.68 2.29
3097 3126 7.670364 AGCACCTAATTAATGCTCTTGTTTTT 58.330 30.769 15.10 0.00 46.68 1.94
3098 3127 7.232118 AGCACCTAATTAATGCTCTTGTTTT 57.768 32.000 15.10 0.00 46.68 2.43
3099 3128 6.840780 AGCACCTAATTAATGCTCTTGTTT 57.159 33.333 15.10 0.00 46.68 2.83
3117 3146 7.947284 ATACTTTTTGTAGTTTGCAGAAGCACC 60.947 37.037 0.00 0.00 41.88 5.01
3118 3147 6.918022 ATACTTTTTGTAGTTTGCAGAAGCAC 59.082 34.615 0.00 0.00 41.88 4.40
3119 3148 7.038154 ATACTTTTTGTAGTTTGCAGAAGCA 57.962 32.000 0.00 0.00 41.05 3.91
3120 3149 7.114953 GGAATACTTTTTGTAGTTTGCAGAAGC 59.885 37.037 0.00 0.00 36.48 3.86
3121 3150 8.134895 TGGAATACTTTTTGTAGTTTGCAGAAG 58.865 33.333 0.00 0.00 34.24 2.85
3122 3151 7.918562 GTGGAATACTTTTTGTAGTTTGCAGAA 59.081 33.333 0.00 0.00 34.24 3.02
3123 3152 7.422399 GTGGAATACTTTTTGTAGTTTGCAGA 58.578 34.615 0.00 0.00 34.24 4.26
3124 3153 6.640907 GGTGGAATACTTTTTGTAGTTTGCAG 59.359 38.462 0.00 0.00 34.24 4.41
3125 3154 6.096987 TGGTGGAATACTTTTTGTAGTTTGCA 59.903 34.615 0.00 0.00 34.24 4.08
3126 3155 6.419710 GTGGTGGAATACTTTTTGTAGTTTGC 59.580 38.462 0.00 0.00 34.24 3.68
3127 3156 7.712797 AGTGGTGGAATACTTTTTGTAGTTTG 58.287 34.615 0.00 0.00 34.24 2.93
3128 3157 7.558444 TGAGTGGTGGAATACTTTTTGTAGTTT 59.442 33.333 0.00 0.00 34.24 2.66
3129 3158 7.057894 TGAGTGGTGGAATACTTTTTGTAGTT 58.942 34.615 0.00 0.00 34.24 2.24
3130 3159 6.597562 TGAGTGGTGGAATACTTTTTGTAGT 58.402 36.000 0.00 0.00 34.24 2.73
3131 3160 7.390440 TGATGAGTGGTGGAATACTTTTTGTAG 59.610 37.037 0.00 0.00 34.24 2.74
3132 3161 7.227873 TGATGAGTGGTGGAATACTTTTTGTA 58.772 34.615 0.00 0.00 35.37 2.41
3133 3162 6.068010 TGATGAGTGGTGGAATACTTTTTGT 58.932 36.000 0.00 0.00 0.00 2.83
3134 3163 6.573664 TGATGAGTGGTGGAATACTTTTTG 57.426 37.500 0.00 0.00 0.00 2.44
3135 3164 7.177878 AGATGATGAGTGGTGGAATACTTTTT 58.822 34.615 0.00 0.00 0.00 1.94
3136 3165 6.725364 AGATGATGAGTGGTGGAATACTTTT 58.275 36.000 0.00 0.00 0.00 2.27
3137 3166 6.319048 AGATGATGAGTGGTGGAATACTTT 57.681 37.500 0.00 0.00 0.00 2.66
3138 3167 5.965033 AGATGATGAGTGGTGGAATACTT 57.035 39.130 0.00 0.00 0.00 2.24
3139 3168 5.305644 GGTAGATGATGAGTGGTGGAATACT 59.694 44.000 0.00 0.00 0.00 2.12
3140 3169 5.305644 AGGTAGATGATGAGTGGTGGAATAC 59.694 44.000 0.00 0.00 0.00 1.89
3141 3170 5.467738 AGGTAGATGATGAGTGGTGGAATA 58.532 41.667 0.00 0.00 0.00 1.75
3142 3171 4.302067 AGGTAGATGATGAGTGGTGGAAT 58.698 43.478 0.00 0.00 0.00 3.01
3143 3172 3.724478 AGGTAGATGATGAGTGGTGGAA 58.276 45.455 0.00 0.00 0.00 3.53
3144 3173 3.404869 AGGTAGATGATGAGTGGTGGA 57.595 47.619 0.00 0.00 0.00 4.02
3145 3174 3.432749 CCAAGGTAGATGATGAGTGGTGG 60.433 52.174 0.00 0.00 0.00 4.61
3146 3175 3.198635 ACCAAGGTAGATGATGAGTGGTG 59.801 47.826 0.00 0.00 36.77 4.17
3147 3176 3.454858 ACCAAGGTAGATGATGAGTGGT 58.545 45.455 0.00 0.00 33.31 4.16
3148 3177 4.194640 CAACCAAGGTAGATGATGAGTGG 58.805 47.826 0.00 0.00 0.00 4.00
3149 3178 4.194640 CCAACCAAGGTAGATGATGAGTG 58.805 47.826 0.00 0.00 0.00 3.51
3150 3179 3.846588 ACCAACCAAGGTAGATGATGAGT 59.153 43.478 0.00 0.00 40.98 3.41
3151 3180 4.080919 TCACCAACCAAGGTAGATGATGAG 60.081 45.833 0.00 0.00 40.77 2.90
3152 3181 3.843619 TCACCAACCAAGGTAGATGATGA 59.156 43.478 0.00 0.00 40.77 2.92
3153 3182 4.080919 TCTCACCAACCAAGGTAGATGATG 60.081 45.833 0.00 0.00 40.77 3.07
3154 3183 4.104086 TCTCACCAACCAAGGTAGATGAT 58.896 43.478 0.00 0.00 40.77 2.45
3155 3184 3.516586 TCTCACCAACCAAGGTAGATGA 58.483 45.455 0.00 0.00 40.77 2.92
3156 3185 3.981071 TCTCACCAACCAAGGTAGATG 57.019 47.619 0.00 0.00 40.77 2.90
3157 3186 5.520748 AAATCTCACCAACCAAGGTAGAT 57.479 39.130 0.00 0.00 40.77 1.98
3158 3187 4.993705 AAATCTCACCAACCAAGGTAGA 57.006 40.909 0.00 0.00 40.77 2.59
3159 3188 5.534654 TCAAAAATCTCACCAACCAAGGTAG 59.465 40.000 0.00 0.00 40.77 3.18
3160 3189 5.450453 TCAAAAATCTCACCAACCAAGGTA 58.550 37.500 0.00 0.00 40.77 3.08
3161 3190 4.285863 TCAAAAATCTCACCAACCAAGGT 58.714 39.130 0.00 0.00 44.48 3.50
3162 3191 4.935352 TCAAAAATCTCACCAACCAAGG 57.065 40.909 0.00 0.00 0.00 3.61
3163 3192 6.985645 TCAATTCAAAAATCTCACCAACCAAG 59.014 34.615 0.00 0.00 0.00 3.61
3164 3193 6.882656 TCAATTCAAAAATCTCACCAACCAA 58.117 32.000 0.00 0.00 0.00 3.67
3165 3194 6.477053 TCAATTCAAAAATCTCACCAACCA 57.523 33.333 0.00 0.00 0.00 3.67
3166 3195 5.406477 GCTCAATTCAAAAATCTCACCAACC 59.594 40.000 0.00 0.00 0.00 3.77
3167 3196 5.406477 GGCTCAATTCAAAAATCTCACCAAC 59.594 40.000 0.00 0.00 0.00 3.77
3168 3197 5.511202 GGGCTCAATTCAAAAATCTCACCAA 60.511 40.000 0.00 0.00 0.00 3.67
3169 3198 4.021192 GGGCTCAATTCAAAAATCTCACCA 60.021 41.667 0.00 0.00 0.00 4.17
3170 3199 4.221482 AGGGCTCAATTCAAAAATCTCACC 59.779 41.667 0.00 0.00 0.00 4.02
3171 3200 5.397142 AGGGCTCAATTCAAAAATCTCAC 57.603 39.130 0.00 0.00 0.00 3.51
3172 3201 8.821686 TTATAGGGCTCAATTCAAAAATCTCA 57.178 30.769 0.00 0.00 0.00 3.27
3173 3202 9.521503 GTTTATAGGGCTCAATTCAAAAATCTC 57.478 33.333 0.00 0.00 0.00 2.75
3174 3203 8.478066 GGTTTATAGGGCTCAATTCAAAAATCT 58.522 33.333 0.00 0.00 0.00 2.40
3175 3204 7.435192 CGGTTTATAGGGCTCAATTCAAAAATC 59.565 37.037 0.00 0.00 0.00 2.17
3176 3205 7.264947 CGGTTTATAGGGCTCAATTCAAAAAT 58.735 34.615 0.00 0.00 0.00 1.82
3177 3206 6.350612 CCGGTTTATAGGGCTCAATTCAAAAA 60.351 38.462 0.00 0.00 0.00 1.94
3178 3207 5.126384 CCGGTTTATAGGGCTCAATTCAAAA 59.874 40.000 0.00 0.00 0.00 2.44
3179 3208 4.642885 CCGGTTTATAGGGCTCAATTCAAA 59.357 41.667 0.00 0.00 0.00 2.69
3180 3209 4.080243 TCCGGTTTATAGGGCTCAATTCAA 60.080 41.667 0.00 0.00 0.00 2.69
3181 3210 3.456644 TCCGGTTTATAGGGCTCAATTCA 59.543 43.478 0.00 0.00 0.00 2.57
3182 3211 4.081322 TCCGGTTTATAGGGCTCAATTC 57.919 45.455 0.00 0.00 0.00 2.17
3183 3212 4.513406 TTCCGGTTTATAGGGCTCAATT 57.487 40.909 0.00 0.00 0.00 2.32
3184 3213 4.461198 CTTTCCGGTTTATAGGGCTCAAT 58.539 43.478 0.00 0.00 0.00 2.57
3185 3214 3.371166 CCTTTCCGGTTTATAGGGCTCAA 60.371 47.826 0.00 0.00 0.00 3.02
3186 3215 2.171870 CCTTTCCGGTTTATAGGGCTCA 59.828 50.000 0.00 0.00 0.00 4.26
3187 3216 2.436911 TCCTTTCCGGTTTATAGGGCTC 59.563 50.000 0.00 0.00 0.00 4.70
3188 3217 2.438392 CTCCTTTCCGGTTTATAGGGCT 59.562 50.000 0.00 0.00 0.00 5.19
3189 3218 2.486727 CCTCCTTTCCGGTTTATAGGGC 60.487 54.545 0.00 0.00 0.00 5.19
3190 3219 2.105993 CCCTCCTTTCCGGTTTATAGGG 59.894 54.545 16.03 16.03 36.05 3.53
3191 3220 3.043418 TCCCTCCTTTCCGGTTTATAGG 58.957 50.000 0.00 4.62 0.00 2.57
3192 3221 3.710165 ACTCCCTCCTTTCCGGTTTATAG 59.290 47.826 0.00 0.00 0.00 1.31
3193 3222 3.727948 ACTCCCTCCTTTCCGGTTTATA 58.272 45.455 0.00 0.00 0.00 0.98
3194 3223 2.558974 ACTCCCTCCTTTCCGGTTTAT 58.441 47.619 0.00 0.00 0.00 1.40
3195 3224 2.034436 ACTCCCTCCTTTCCGGTTTA 57.966 50.000 0.00 0.00 0.00 2.01
3196 3225 1.627329 GTACTCCCTCCTTTCCGGTTT 59.373 52.381 0.00 0.00 0.00 3.27
3197 3226 1.203275 AGTACTCCCTCCTTTCCGGTT 60.203 52.381 0.00 0.00 0.00 4.44
3198 3227 0.412640 AGTACTCCCTCCTTTCCGGT 59.587 55.000 0.00 0.00 0.00 5.28
3199 3228 1.207329 CAAGTACTCCCTCCTTTCCGG 59.793 57.143 0.00 0.00 0.00 5.14
3200 3229 1.207329 CCAAGTACTCCCTCCTTTCCG 59.793 57.143 0.00 0.00 0.00 4.30
3201 3230 1.065345 GCCAAGTACTCCCTCCTTTCC 60.065 57.143 0.00 0.00 0.00 3.13
3202 3231 1.909986 AGCCAAGTACTCCCTCCTTTC 59.090 52.381 0.00 0.00 0.00 2.62
3203 3232 2.046280 AGCCAAGTACTCCCTCCTTT 57.954 50.000 0.00 0.00 0.00 3.11
3204 3233 2.046280 AAGCCAAGTACTCCCTCCTT 57.954 50.000 0.00 0.00 0.00 3.36
3205 3234 2.046280 AAAGCCAAGTACTCCCTCCT 57.954 50.000 0.00 0.00 0.00 3.69
3206 3235 2.838813 AGTAAAGCCAAGTACTCCCTCC 59.161 50.000 0.00 0.00 0.00 4.30
3207 3236 4.554960 AAGTAAAGCCAAGTACTCCCTC 57.445 45.455 0.00 0.00 30.18 4.30
3208 3237 4.995624 AAAGTAAAGCCAAGTACTCCCT 57.004 40.909 0.00 0.00 30.18 4.20
3387 3416 3.490761 CGCCTGAACAGAAACAAATTGGT 60.491 43.478 3.19 0.00 0.00 3.67
3466 3495 0.530744 TCTGCAGGTACGAAGCGATT 59.469 50.000 15.13 0.00 0.00 3.34
3567 3596 8.448008 TGCTATAATAGAGGTCCAAATCCATTT 58.552 33.333 0.00 0.00 0.00 2.32
3642 3676 4.553330 ATCACTTGGTATCGGTCAAAGT 57.447 40.909 0.00 0.00 0.00 2.66
3648 3682 9.457436 AAAATACTTTAATCACTTGGTATCGGT 57.543 29.630 0.00 0.00 0.00 4.69
3679 3713 7.967178 ACCTATTTAAAGTTCGTTACAATCCG 58.033 34.615 0.00 0.00 0.00 4.18
3712 3746 7.591006 AAGCAATAGAAATTTGAGCACAATG 57.409 32.000 0.00 0.00 35.85 2.82
3733 3767 9.098355 AGTAAAACAAGGAAAAAGATTCAAAGC 57.902 29.630 0.00 0.00 0.00 3.51
3750 3784 4.139859 TGAGACGGGAACAGTAAAACAA 57.860 40.909 0.00 0.00 0.00 2.83
3751 3785 3.823281 TGAGACGGGAACAGTAAAACA 57.177 42.857 0.00 0.00 0.00 2.83
3752 3786 3.872771 TGTTGAGACGGGAACAGTAAAAC 59.127 43.478 0.00 0.00 0.00 2.43
3763 3797 2.494059 ACTGAAACATGTTGAGACGGG 58.506 47.619 12.82 1.68 0.00 5.28
3825 3860 5.930837 TTCAATGAACACCCTTCAAAAGT 57.069 34.783 0.00 0.00 31.55 2.66
3851 3886 9.990868 AATAAGGATGGTTTTGTTAGGTAATCT 57.009 29.630 0.00 0.00 0.00 2.40
3896 3931 2.095718 GTCTGCCATTTTGACCTTCGTC 60.096 50.000 0.00 0.00 39.66 4.20
3953 3988 7.720957 TCACCATTGACATTGAAATAGGGATAG 59.279 37.037 0.00 0.00 0.00 2.08
4314 4353 2.243736 AGGTCTTGGAAAGTTCACCCAA 59.756 45.455 0.00 0.00 46.34 4.12
4444 4483 7.786178 AGTAAAGCAGCGACAATTAATATGA 57.214 32.000 0.00 0.00 0.00 2.15
4491 4530 8.564574 GGTCCATATTAATTGTCGCTGATTTAA 58.435 33.333 0.00 0.00 0.00 1.52
4496 4535 4.055360 CGGTCCATATTAATTGTCGCTGA 58.945 43.478 0.00 0.00 0.00 4.26
4516 4555 2.083628 AATGGTAGTACTCCCTCCGG 57.916 55.000 6.02 0.00 0.00 5.14
4675 4759 6.151144 AGGAATGCCGAAAAACTATATATGCC 59.849 38.462 0.00 0.00 39.96 4.40
4691 4775 2.613691 ACACGTTAAGTAGGAATGCCG 58.386 47.619 0.00 0.00 39.96 5.69
4780 4864 7.496529 ACCATACCAAATCATCAATAAGACG 57.503 36.000 0.00 0.00 0.00 4.18
4798 4882 4.380841 TGTGTTGATCGGACTACCATAC 57.619 45.455 1.43 0.00 35.59 2.39
4884 4973 3.327404 AGGGTAACACCTGCCGGG 61.327 66.667 2.18 0.00 40.04 5.73
4949 5038 2.306805 TGGCATCTCCTCTTGTTCATGT 59.693 45.455 0.00 0.00 35.26 3.21
4970 5059 1.707427 AGGGCCACTTCTTTCAGTGAT 59.293 47.619 6.18 0.00 46.29 3.06
4992 5081 4.640771 TTCAGGCAGAAGGAAGTATGTT 57.359 40.909 0.00 0.00 0.00 2.71
5070 5159 3.005791 ACTGAAAGCTTCATTTTTCCCCG 59.994 43.478 0.00 0.00 39.30 5.73
5075 5164 7.756722 CGGATGATTACTGAAAGCTTCATTTTT 59.243 33.333 0.00 0.00 39.30 1.94
5193 5290 4.601857 TCCCCAATCAACTATTCCCTATCC 59.398 45.833 0.00 0.00 0.00 2.59
5450 5547 1.552337 CACCCCCGATATCAGGATCTG 59.448 57.143 6.55 0.00 0.00 2.90
5463 5560 2.672996 CAAGTTGCCTCACCCCCG 60.673 66.667 0.00 0.00 0.00 5.73
5564 5661 3.119743 CCGGTTGTAACAGACATCGAGTA 60.120 47.826 0.00 0.00 38.07 2.59
5569 5666 3.314541 AGACCGGTTGTAACAGACATC 57.685 47.619 9.42 0.00 38.07 3.06
5626 5723 3.319198 TGCCCCGTTCTCCTCACC 61.319 66.667 0.00 0.00 0.00 4.02
5777 5874 8.171840 GCATGAAGATTTCAACTACAACTACTC 58.828 37.037 0.00 0.00 43.95 2.59
5856 5953 3.755378 ACACTTCTGCATTTCATCCAGAC 59.245 43.478 0.00 0.00 35.52 3.51
5899 5996 6.152379 ACGTTCCGTTTCTTTTAGGTAGTAG 58.848 40.000 0.00 0.00 36.35 2.57
5901 5998 4.948847 ACGTTCCGTTTCTTTTAGGTAGT 58.051 39.130 0.00 0.00 36.35 2.73
5922 6019 1.001293 ACGTAAGAGGGGAAACGGAAC 59.999 52.381 0.00 0.00 39.57 3.62
5923 6020 1.273327 GACGTAAGAGGGGAAACGGAA 59.727 52.381 0.00 0.00 39.57 4.30
5924 6021 0.890683 GACGTAAGAGGGGAAACGGA 59.109 55.000 0.00 0.00 39.57 4.69
5925 6022 0.457337 CGACGTAAGAGGGGAAACGG 60.457 60.000 0.00 0.00 39.57 4.44
5926 6023 0.242017 ACGACGTAAGAGGGGAAACG 59.758 55.000 0.00 0.00 43.62 3.60
5928 6025 0.523072 CGACGACGTAAGAGGGGAAA 59.477 55.000 0.00 0.00 43.62 3.13
5929 6026 0.321564 TCGACGACGTAAGAGGGGAA 60.322 55.000 0.00 0.00 43.62 3.97
5931 6028 0.307146 GATCGACGACGTAAGAGGGG 59.693 60.000 0.00 0.00 43.62 4.79
5933 6030 2.597040 CGAAGATCGACGACGTAAGAGG 60.597 54.545 0.00 0.00 43.74 3.69
5934 6031 2.029003 ACGAAGATCGACGACGTAAGAG 59.971 50.000 18.13 0.00 43.74 2.85
5935 6032 1.995484 ACGAAGATCGACGACGTAAGA 59.005 47.619 18.13 4.09 43.74 2.10
5937 6034 1.061131 GGACGAAGATCGACGACGTAA 59.939 52.381 18.13 0.00 43.74 3.18
5939 6036 1.293963 TGGACGAAGATCGACGACGT 61.294 55.000 18.13 10.50 43.74 4.34
5940 6037 0.586748 CTGGACGAAGATCGACGACG 60.587 60.000 18.13 0.00 43.74 5.12
5941 6038 0.862283 GCTGGACGAAGATCGACGAC 60.862 60.000 18.13 12.89 43.74 4.34
5942 6039 1.428219 GCTGGACGAAGATCGACGA 59.572 57.895 18.13 0.00 43.74 4.20
5943 6040 1.586564 GGCTGGACGAAGATCGACG 60.587 63.158 6.78 11.68 43.74 5.12
5944 6041 0.173708 AAGGCTGGACGAAGATCGAC 59.826 55.000 6.78 0.00 43.74 4.20
5946 6043 0.867753 CGAAGGCTGGACGAAGATCG 60.868 60.000 0.00 0.00 46.93 3.69
5947 6044 1.148759 GCGAAGGCTGGACGAAGATC 61.149 60.000 11.89 0.00 35.83 2.75
5948 6045 1.153549 GCGAAGGCTGGACGAAGAT 60.154 57.895 11.89 0.00 35.83 2.40
5949 6046 2.261671 GCGAAGGCTGGACGAAGA 59.738 61.111 11.89 0.00 35.83 2.87
5961 6058 0.161024 GGACAACGAAACGAGCGAAG 59.839 55.000 0.00 0.00 0.00 3.79
5962 6059 1.216941 GGGACAACGAAACGAGCGAA 61.217 55.000 0.00 0.00 0.00 4.70
5963 6060 1.662446 GGGACAACGAAACGAGCGA 60.662 57.895 0.00 0.00 0.00 4.93
5967 6064 0.531090 CCACAGGGACAACGAAACGA 60.531 55.000 0.00 0.00 35.59 3.85
5968 6065 1.938861 CCACAGGGACAACGAAACG 59.061 57.895 0.00 0.00 35.59 3.60
5969 6066 1.652563 GCCACAGGGACAACGAAAC 59.347 57.895 0.00 0.00 35.59 2.78
5971 6068 2.112297 GGCCACAGGGACAACGAA 59.888 61.111 0.00 0.00 44.16 3.85
5992 6089 3.741476 CTTTCTGGGCCTGCGCAC 61.741 66.667 5.66 0.00 39.66 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.