Multiple sequence alignment - TraesCS6B01G115800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G115800 chr6B 100.000 2619 0 0 1 2619 101165988 101168606 0.000000e+00 4837.0
1 TraesCS6B01G115800 chr6B 89.333 975 68 18 822 1771 101325855 101324892 0.000000e+00 1192.0
2 TraesCS6B01G115800 chr6B 94.419 430 21 1 1066 1492 35818873 35818444 0.000000e+00 658.0
3 TraesCS6B01G115800 chr6B 94.762 420 19 1 1076 1492 35629117 35629536 0.000000e+00 651.0
4 TraesCS6B01G115800 chr6B 80.512 703 78 23 1941 2619 101176807 101177474 3.920000e-133 484.0
5 TraesCS6B01G115800 chrUn 90.158 1077 75 11 718 1772 69361993 69363060 0.000000e+00 1373.0
6 TraesCS6B01G115800 chrUn 90.207 868 62 13 713 1577 69444809 69443962 0.000000e+00 1110.0
7 TraesCS6B01G115800 chrUn 82.700 474 50 10 2169 2619 69363364 69363828 2.440000e-105 392.0
8 TraesCS6B01G115800 chrUn 91.724 145 11 1 1769 1913 69363170 69363313 1.590000e-47 200.0
9 TraesCS6B01G115800 chrUn 93.617 47 2 1 634 680 69361968 69362013 4.680000e-08 69.4
10 TraesCS6B01G115800 chr6A 89.843 1083 70 21 713 1772 55033380 55032315 0.000000e+00 1354.0
11 TraesCS6B01G115800 chr6A 88.122 1086 82 21 713 1772 54777851 54778915 0.000000e+00 1247.0
12 TraesCS6B01G115800 chr6A 88.301 624 48 6 1769 2368 54779025 54779647 0.000000e+00 725.0
13 TraesCS6B01G115800 chr6A 91.545 343 24 3 2276 2618 55029634 55029297 3.950000e-128 468.0
14 TraesCS6B01G115800 chr6A 80.338 651 76 26 1769 2391 55025506 55024880 1.850000e-121 446.0
15 TraesCS6B01G115800 chr6A 89.712 243 24 1 1924 2165 55031136 55030894 2.530000e-80 309.0
16 TraesCS6B01G115800 chr6A 85.714 203 25 2 2417 2619 55024411 55024213 7.340000e-51 211.0
17 TraesCS6B01G115800 chr6A 100.000 34 0 0 1597 1630 54779851 54779884 2.180000e-06 63.9
18 TraesCS6B01G115800 chr3B 94.860 428 22 0 1062 1489 80658938 80658511 0.000000e+00 669.0
19 TraesCS6B01G115800 chr3D 94.787 422 19 1 1065 1483 50658464 50658043 0.000000e+00 654.0
20 TraesCS6B01G115800 chr7A 84.146 82 11 2 218 298 473926165 473926085 7.770000e-11 78.7
21 TraesCS6B01G115800 chr6D 95.556 45 2 0 253 297 81654009 81654053 3.620000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G115800 chr6B 101165988 101168606 2618 False 4837.000000 4837 100.00000 1 2619 1 chr6B.!!$F2 2618
1 TraesCS6B01G115800 chr6B 101324892 101325855 963 True 1192.000000 1192 89.33300 822 1771 1 chr6B.!!$R2 949
2 TraesCS6B01G115800 chr6B 101176807 101177474 667 False 484.000000 484 80.51200 1941 2619 1 chr6B.!!$F3 678
3 TraesCS6B01G115800 chrUn 69443962 69444809 847 True 1110.000000 1110 90.20700 713 1577 1 chrUn.!!$R1 864
4 TraesCS6B01G115800 chrUn 69361968 69363828 1860 False 508.600000 1373 89.54975 634 2619 4 chrUn.!!$F1 1985
5 TraesCS6B01G115800 chr6A 54777851 54779884 2033 False 678.633333 1247 92.14100 713 2368 3 chr6A.!!$F1 1655
6 TraesCS6B01G115800 chr6A 55024213 55033380 9167 True 557.600000 1354 87.43040 713 2619 5 chr6A.!!$R1 1906

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
224 225 0.103208 AAAAATTCGGTGCGGTGCAA 59.897 45.0 0.0 0.0 41.47 4.08 F
592 593 0.107643 TCAAGCCGTGTCCATTGTCA 59.892 50.0 0.0 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1074 1079 0.106569 CTTGGGTGCCATGGATGCTA 60.107 55.0 18.4 0.0 31.53 3.49 R
2510 9813 0.323725 GGCCTGACCCACACATCATT 60.324 55.0 0.0 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 7.573968 AATTTTTGCATGATCTAGGTACTCC 57.426 36.000 0.00 0.00 41.75 3.85
72 73 5.692115 TTTTGCATGATCTAGGTACTCCA 57.308 39.130 0.00 0.00 41.75 3.86
73 74 5.894298 TTTGCATGATCTAGGTACTCCAT 57.106 39.130 0.00 0.00 41.75 3.41
74 75 5.474578 TTGCATGATCTAGGTACTCCATC 57.525 43.478 0.00 0.00 41.75 3.51
75 76 4.745351 TGCATGATCTAGGTACTCCATCT 58.255 43.478 0.00 0.00 41.75 2.90
76 77 5.150715 TGCATGATCTAGGTACTCCATCTT 58.849 41.667 0.00 0.00 41.75 2.40
77 78 6.314917 TGCATGATCTAGGTACTCCATCTTA 58.685 40.000 0.00 0.00 41.75 2.10
78 79 6.956435 TGCATGATCTAGGTACTCCATCTTAT 59.044 38.462 0.00 0.00 41.75 1.73
79 80 7.093596 TGCATGATCTAGGTACTCCATCTTATG 60.094 40.741 0.00 0.00 41.75 1.90
93 94 2.991250 TCTTATGGAGTTGGAGCTTGC 58.009 47.619 0.00 0.00 0.00 4.01
94 95 2.573462 TCTTATGGAGTTGGAGCTTGCT 59.427 45.455 0.00 0.00 0.00 3.91
95 96 3.009473 TCTTATGGAGTTGGAGCTTGCTT 59.991 43.478 0.00 0.00 0.00 3.91
96 97 4.225042 TCTTATGGAGTTGGAGCTTGCTTA 59.775 41.667 0.00 0.00 0.00 3.09
97 98 2.185004 TGGAGTTGGAGCTTGCTTAC 57.815 50.000 0.00 0.00 0.00 2.34
98 99 1.419762 TGGAGTTGGAGCTTGCTTACA 59.580 47.619 0.00 0.00 0.00 2.41
99 100 1.807142 GGAGTTGGAGCTTGCTTACAC 59.193 52.381 0.00 0.00 0.00 2.90
100 101 2.551071 GGAGTTGGAGCTTGCTTACACT 60.551 50.000 0.00 0.00 0.00 3.55
101 102 3.306780 GGAGTTGGAGCTTGCTTACACTA 60.307 47.826 0.00 0.00 0.00 2.74
102 103 4.508662 GAGTTGGAGCTTGCTTACACTAT 58.491 43.478 0.00 0.00 0.00 2.12
103 104 4.256920 AGTTGGAGCTTGCTTACACTATG 58.743 43.478 0.00 0.00 0.00 2.23
104 105 3.981071 TGGAGCTTGCTTACACTATGT 57.019 42.857 0.00 0.00 0.00 2.29
105 106 4.286297 TGGAGCTTGCTTACACTATGTT 57.714 40.909 0.00 0.00 0.00 2.71
106 107 5.414789 TGGAGCTTGCTTACACTATGTTA 57.585 39.130 0.00 0.00 0.00 2.41
107 108 5.800296 TGGAGCTTGCTTACACTATGTTAA 58.200 37.500 0.00 0.00 0.00 2.01
108 109 5.642063 TGGAGCTTGCTTACACTATGTTAAC 59.358 40.000 0.00 0.00 0.00 2.01
109 110 5.220416 GGAGCTTGCTTACACTATGTTAACG 60.220 44.000 0.26 0.00 0.00 3.18
110 111 4.630069 AGCTTGCTTACACTATGTTAACGG 59.370 41.667 0.26 0.00 0.00 4.44
111 112 4.726876 GCTTGCTTACACTATGTTAACGGC 60.727 45.833 0.26 0.00 0.00 5.68
112 113 3.264104 TGCTTACACTATGTTAACGGCC 58.736 45.455 0.26 0.00 0.00 6.13
113 114 2.283351 GCTTACACTATGTTAACGGCCG 59.717 50.000 26.86 26.86 0.00 6.13
114 115 3.514645 CTTACACTATGTTAACGGCCGT 58.485 45.455 28.70 28.70 0.00 5.68
115 116 2.460757 ACACTATGTTAACGGCCGTT 57.539 45.000 41.91 41.91 41.65 4.44
116 117 3.591196 ACACTATGTTAACGGCCGTTA 57.409 42.857 39.67 39.67 39.31 3.18
117 118 3.253230 ACACTATGTTAACGGCCGTTAC 58.747 45.455 42.22 34.28 39.90 2.50
118 119 3.056607 ACACTATGTTAACGGCCGTTACT 60.057 43.478 42.22 31.38 39.90 2.24
119 120 3.549070 CACTATGTTAACGGCCGTTACTC 59.451 47.826 42.22 34.99 39.90 2.59
120 121 1.632422 ATGTTAACGGCCGTTACTCG 58.368 50.000 42.22 12.49 39.90 4.18
121 122 1.008361 TGTTAACGGCCGTTACTCGC 61.008 55.000 42.22 31.14 39.90 5.03
122 123 1.801113 TTAACGGCCGTTACTCGCG 60.801 57.895 42.22 10.94 39.90 5.87
131 132 4.824166 TTACTCGCGCGCCGTCTC 62.824 66.667 27.95 0.00 38.35 3.36
142 143 4.477975 CCGTCTCCGTCTCGCCAC 62.478 72.222 0.00 0.00 0.00 5.01
143 144 4.813526 CGTCTCCGTCTCGCCACG 62.814 72.222 0.00 0.00 39.61 4.94
144 145 3.735029 GTCTCCGTCTCGCCACGT 61.735 66.667 5.43 0.00 38.14 4.49
145 146 3.733960 TCTCCGTCTCGCCACGTG 61.734 66.667 9.08 9.08 38.14 4.49
146 147 4.778415 CTCCGTCTCGCCACGTGG 62.778 72.222 30.66 30.66 38.14 4.94
149 150 4.337060 CGTCTCGCCACGTGGTCA 62.337 66.667 33.92 20.19 37.57 4.02
150 151 2.430921 GTCTCGCCACGTGGTCAG 60.431 66.667 33.92 27.48 37.57 3.51
151 152 2.910479 TCTCGCCACGTGGTCAGT 60.910 61.111 33.92 0.00 37.57 3.41
152 153 2.029073 CTCGCCACGTGGTCAGTT 59.971 61.111 33.92 0.00 37.57 3.16
153 154 1.594293 CTCGCCACGTGGTCAGTTT 60.594 57.895 33.92 0.00 37.57 2.66
154 155 1.831389 CTCGCCACGTGGTCAGTTTG 61.831 60.000 33.92 15.67 37.57 2.93
155 156 2.331451 GCCACGTGGTCAGTTTGC 59.669 61.111 33.92 14.51 37.57 3.68
156 157 3.030652 CCACGTGGTCAGTTTGCC 58.969 61.111 26.95 0.00 0.00 4.52
157 158 1.821759 CCACGTGGTCAGTTTGCCA 60.822 57.895 26.95 0.00 0.00 4.92
158 159 1.648720 CACGTGGTCAGTTTGCCAG 59.351 57.895 7.95 0.00 35.14 4.85
159 160 1.525995 ACGTGGTCAGTTTGCCAGG 60.526 57.895 0.00 0.00 43.80 4.45
160 161 1.525995 CGTGGTCAGTTTGCCAGGT 60.526 57.895 0.00 0.00 36.30 4.00
161 162 1.507141 CGTGGTCAGTTTGCCAGGTC 61.507 60.000 0.00 0.00 36.30 3.85
162 163 0.465460 GTGGTCAGTTTGCCAGGTCA 60.465 55.000 0.00 0.00 35.14 4.02
163 164 0.257328 TGGTCAGTTTGCCAGGTCAA 59.743 50.000 0.00 0.00 0.00 3.18
164 165 1.341482 TGGTCAGTTTGCCAGGTCAAA 60.341 47.619 5.27 5.27 33.94 2.69
165 166 1.754226 GGTCAGTTTGCCAGGTCAAAA 59.246 47.619 9.75 0.00 37.65 2.44
166 167 2.481276 GGTCAGTTTGCCAGGTCAAAAC 60.481 50.000 9.75 8.06 37.65 2.43
167 168 2.165437 GTCAGTTTGCCAGGTCAAAACA 59.835 45.455 9.75 0.00 37.65 2.83
168 169 3.030291 TCAGTTTGCCAGGTCAAAACAT 58.970 40.909 9.75 0.00 37.65 2.71
169 170 3.125316 CAGTTTGCCAGGTCAAAACATG 58.875 45.455 9.75 0.00 37.65 3.21
170 171 1.866601 GTTTGCCAGGTCAAAACATGC 59.133 47.619 9.75 0.00 37.65 4.06
171 172 1.412079 TTGCCAGGTCAAAACATGCT 58.588 45.000 0.00 0.00 35.87 3.79
172 173 0.961019 TGCCAGGTCAAAACATGCTC 59.039 50.000 0.00 0.00 35.87 4.26
173 174 0.961019 GCCAGGTCAAAACATGCTCA 59.039 50.000 0.00 0.00 35.87 4.26
174 175 1.340889 GCCAGGTCAAAACATGCTCAA 59.659 47.619 0.00 0.00 35.87 3.02
175 176 2.224018 GCCAGGTCAAAACATGCTCAAA 60.224 45.455 0.00 0.00 35.87 2.69
176 177 3.740764 GCCAGGTCAAAACATGCTCAAAA 60.741 43.478 0.00 0.00 35.87 2.44
177 178 4.440880 CCAGGTCAAAACATGCTCAAAAA 58.559 39.130 0.00 0.00 35.87 1.94
214 215 5.830900 TTTTGACGCCATTAAAAATTCGG 57.169 34.783 0.00 0.00 0.00 4.30
215 216 4.506886 TTGACGCCATTAAAAATTCGGT 57.493 36.364 0.00 0.00 0.00 4.69
216 217 3.827625 TGACGCCATTAAAAATTCGGTG 58.172 40.909 0.00 0.00 0.00 4.94
217 218 2.596862 GACGCCATTAAAAATTCGGTGC 59.403 45.455 0.00 0.00 0.00 5.01
218 219 1.581602 CGCCATTAAAAATTCGGTGCG 59.418 47.619 0.00 0.00 0.00 5.34
219 220 1.923864 GCCATTAAAAATTCGGTGCGG 59.076 47.619 0.00 0.00 0.00 5.69
220 221 2.672760 GCCATTAAAAATTCGGTGCGGT 60.673 45.455 0.00 0.00 0.00 5.68
221 222 2.920490 CCATTAAAAATTCGGTGCGGTG 59.080 45.455 0.00 0.00 0.00 4.94
222 223 2.053282 TTAAAAATTCGGTGCGGTGC 57.947 45.000 0.00 0.00 0.00 5.01
223 224 0.952280 TAAAAATTCGGTGCGGTGCA 59.048 45.000 0.00 0.00 35.60 4.57
224 225 0.103208 AAAAATTCGGTGCGGTGCAA 59.897 45.000 0.00 0.00 41.47 4.08
225 226 0.103208 AAAATTCGGTGCGGTGCAAA 59.897 45.000 0.00 0.00 41.47 3.68
226 227 0.103208 AAATTCGGTGCGGTGCAAAA 59.897 45.000 0.00 0.00 41.47 2.44
227 228 0.316841 AATTCGGTGCGGTGCAAAAT 59.683 45.000 0.00 0.00 41.47 1.82
228 229 0.388391 ATTCGGTGCGGTGCAAAATG 60.388 50.000 0.00 0.00 41.47 2.32
229 230 2.413437 TTCGGTGCGGTGCAAAATGG 62.413 55.000 0.00 0.00 41.47 3.16
230 231 2.738139 GGTGCGGTGCAAAATGGC 60.738 61.111 0.00 0.00 41.47 4.40
231 232 2.028778 GTGCGGTGCAAAATGGCA 59.971 55.556 0.00 0.00 41.47 4.92
238 239 3.398184 TGCAAAATGGCACGAATCG 57.602 47.368 0.00 0.00 39.25 3.34
239 240 0.595588 TGCAAAATGGCACGAATCGT 59.404 45.000 0.96 0.96 42.36 3.73
240 241 1.807142 TGCAAAATGGCACGAATCGTA 59.193 42.857 8.35 0.00 38.32 3.43
241 242 2.226674 TGCAAAATGGCACGAATCGTAA 59.773 40.909 8.35 0.00 38.32 3.18
242 243 3.238441 GCAAAATGGCACGAATCGTAAA 58.762 40.909 8.35 0.00 38.32 2.01
243 244 3.300590 GCAAAATGGCACGAATCGTAAAG 59.699 43.478 8.35 0.00 38.32 1.85
244 245 4.472286 CAAAATGGCACGAATCGTAAAGT 58.528 39.130 8.35 0.00 38.32 2.66
245 246 4.759516 AAATGGCACGAATCGTAAAGTT 57.240 36.364 8.35 0.00 38.32 2.66
246 247 5.866335 AAATGGCACGAATCGTAAAGTTA 57.134 34.783 8.35 0.00 38.32 2.24
247 248 6.431198 AAATGGCACGAATCGTAAAGTTAT 57.569 33.333 8.35 0.00 38.32 1.89
248 249 4.850859 TGGCACGAATCGTAAAGTTATG 57.149 40.909 8.35 0.00 38.32 1.90
249 250 3.062909 TGGCACGAATCGTAAAGTTATGC 59.937 43.478 8.35 4.96 38.32 3.14
250 251 3.308866 GGCACGAATCGTAAAGTTATGCT 59.691 43.478 8.35 0.00 38.32 3.79
251 252 4.201783 GGCACGAATCGTAAAGTTATGCTT 60.202 41.667 8.35 0.00 38.32 3.91
253 254 5.793457 GCACGAATCGTAAAGTTATGCTTTT 59.207 36.000 8.35 0.00 45.77 2.27
254 255 6.304683 GCACGAATCGTAAAGTTATGCTTTTT 59.695 34.615 8.35 0.00 45.77 1.94
275 276 7.840342 TTTTTGCTAATTGTGACACAAATGT 57.160 28.000 24.00 14.64 41.96 2.71
287 288 3.082698 CACAAATGTGGTGGTTCTGTG 57.917 47.619 5.63 0.00 42.10 3.66
288 289 2.031120 ACAAATGTGGTGGTTCTGTGG 58.969 47.619 0.00 0.00 0.00 4.17
289 290 2.305928 CAAATGTGGTGGTTCTGTGGA 58.694 47.619 0.00 0.00 0.00 4.02
290 291 2.892852 CAAATGTGGTGGTTCTGTGGAT 59.107 45.455 0.00 0.00 0.00 3.41
291 292 2.978156 ATGTGGTGGTTCTGTGGATT 57.022 45.000 0.00 0.00 0.00 3.01
292 293 2.746279 TGTGGTGGTTCTGTGGATTT 57.254 45.000 0.00 0.00 0.00 2.17
293 294 3.025322 TGTGGTGGTTCTGTGGATTTT 57.975 42.857 0.00 0.00 0.00 1.82
294 295 4.171878 TGTGGTGGTTCTGTGGATTTTA 57.828 40.909 0.00 0.00 0.00 1.52
295 296 3.886505 TGTGGTGGTTCTGTGGATTTTAC 59.113 43.478 0.00 0.00 0.00 2.01
296 297 4.142038 GTGGTGGTTCTGTGGATTTTACT 58.858 43.478 0.00 0.00 0.00 2.24
297 298 4.215613 GTGGTGGTTCTGTGGATTTTACTC 59.784 45.833 0.00 0.00 0.00 2.59
298 299 3.756963 GGTGGTTCTGTGGATTTTACTCC 59.243 47.826 0.00 0.00 35.74 3.85
299 300 4.394729 GTGGTTCTGTGGATTTTACTCCA 58.605 43.478 0.00 0.00 43.09 3.86
300 301 4.825085 GTGGTTCTGTGGATTTTACTCCAA 59.175 41.667 0.00 0.00 46.66 3.53
301 302 4.825085 TGGTTCTGTGGATTTTACTCCAAC 59.175 41.667 0.00 0.00 46.66 3.77
302 303 4.217767 GGTTCTGTGGATTTTACTCCAACC 59.782 45.833 0.00 0.00 46.66 3.77
303 304 4.715534 TCTGTGGATTTTACTCCAACCA 57.284 40.909 0.00 0.00 46.66 3.67
304 305 5.255397 TCTGTGGATTTTACTCCAACCAT 57.745 39.130 0.00 0.00 46.66 3.55
305 306 6.381498 TCTGTGGATTTTACTCCAACCATA 57.619 37.500 0.00 0.00 46.66 2.74
306 307 6.785076 TCTGTGGATTTTACTCCAACCATAA 58.215 36.000 0.00 0.00 46.66 1.90
307 308 7.235079 TCTGTGGATTTTACTCCAACCATAAA 58.765 34.615 0.00 0.00 46.66 1.40
308 309 7.393234 TCTGTGGATTTTACTCCAACCATAAAG 59.607 37.037 0.00 0.00 46.66 1.85
309 310 7.235079 TGTGGATTTTACTCCAACCATAAAGA 58.765 34.615 0.00 0.00 46.66 2.52
310 311 7.893302 TGTGGATTTTACTCCAACCATAAAGAT 59.107 33.333 0.00 0.00 46.66 2.40
311 312 9.403583 GTGGATTTTACTCCAACCATAAAGATA 57.596 33.333 0.00 0.00 46.66 1.98
316 317 9.967451 TTTTACTCCAACCATAAAGATATGTGA 57.033 29.630 0.00 0.00 37.75 3.58
317 318 8.958119 TTACTCCAACCATAAAGATATGTGAC 57.042 34.615 0.00 0.00 37.75 3.67
318 319 7.200434 ACTCCAACCATAAAGATATGTGACT 57.800 36.000 0.00 0.00 37.75 3.41
319 320 7.633789 ACTCCAACCATAAAGATATGTGACTT 58.366 34.615 0.00 0.00 37.75 3.01
320 321 7.554118 ACTCCAACCATAAAGATATGTGACTTG 59.446 37.037 0.00 0.00 37.75 3.16
321 322 7.629157 TCCAACCATAAAGATATGTGACTTGA 58.371 34.615 0.00 0.00 37.75 3.02
322 323 8.274322 TCCAACCATAAAGATATGTGACTTGAT 58.726 33.333 0.00 0.00 37.75 2.57
323 324 8.347771 CCAACCATAAAGATATGTGACTTGATG 58.652 37.037 0.00 0.00 37.75 3.07
324 325 9.112725 CAACCATAAAGATATGTGACTTGATGA 57.887 33.333 0.00 0.00 37.22 2.92
325 326 9.857656 AACCATAAAGATATGTGACTTGATGAT 57.142 29.630 0.00 0.00 37.22 2.45
342 343 9.950496 ACTTGATGATATTATAGTCATTGTCCC 57.050 33.333 0.00 0.00 35.33 4.46
343 344 9.948964 CTTGATGATATTATAGTCATTGTCCCA 57.051 33.333 0.00 0.00 35.33 4.37
345 346 9.725019 TGATGATATTATAGTCATTGTCCCAAC 57.275 33.333 0.00 0.00 35.33 3.77
346 347 9.725019 GATGATATTATAGTCATTGTCCCAACA 57.275 33.333 0.00 0.00 35.33 3.33
347 348 8.902540 TGATATTATAGTCATTGTCCCAACAC 57.097 34.615 0.00 0.00 34.35 3.32
348 349 8.490311 TGATATTATAGTCATTGTCCCAACACA 58.510 33.333 0.00 0.00 34.35 3.72
349 350 9.507329 GATATTATAGTCATTGTCCCAACACAT 57.493 33.333 0.00 0.00 34.35 3.21
350 351 9.866655 ATATTATAGTCATTGTCCCAACACATT 57.133 29.630 0.00 0.00 34.35 2.71
351 352 5.902613 ATAGTCATTGTCCCAACACATTG 57.097 39.130 0.00 0.00 34.35 2.82
352 353 3.565307 AGTCATTGTCCCAACACATTGT 58.435 40.909 0.00 0.00 34.35 2.71
353 354 3.569701 AGTCATTGTCCCAACACATTGTC 59.430 43.478 0.00 0.00 34.35 3.18
354 355 3.317711 GTCATTGTCCCAACACATTGTCA 59.682 43.478 0.00 0.00 34.35 3.58
355 356 3.317711 TCATTGTCCCAACACATTGTCAC 59.682 43.478 0.00 0.00 34.35 3.67
356 357 2.426842 TGTCCCAACACATTGTCACA 57.573 45.000 0.00 0.00 33.60 3.58
357 358 2.942804 TGTCCCAACACATTGTCACAT 58.057 42.857 0.00 0.00 33.60 3.21
358 359 3.295093 TGTCCCAACACATTGTCACATT 58.705 40.909 0.00 0.00 33.60 2.71
359 360 4.464947 TGTCCCAACACATTGTCACATTA 58.535 39.130 0.00 0.00 33.60 1.90
360 361 4.889995 TGTCCCAACACATTGTCACATTAA 59.110 37.500 0.00 0.00 33.60 1.40
361 362 5.219633 GTCCCAACACATTGTCACATTAAC 58.780 41.667 0.00 0.00 33.60 2.01
362 363 4.023622 TCCCAACACATTGTCACATTAACG 60.024 41.667 0.00 0.00 33.60 3.18
363 364 4.261405 CCCAACACATTGTCACATTAACGT 60.261 41.667 0.00 0.00 33.60 3.99
364 365 5.277825 CCAACACATTGTCACATTAACGTT 58.722 37.500 5.88 5.88 33.60 3.99
365 366 5.172951 CCAACACATTGTCACATTAACGTTG 59.827 40.000 11.99 0.00 33.60 4.10
366 367 4.286910 ACACATTGTCACATTAACGTTGC 58.713 39.130 11.99 0.00 0.00 4.17
367 368 4.036262 ACACATTGTCACATTAACGTTGCT 59.964 37.500 11.99 0.00 0.00 3.91
368 369 4.975502 CACATTGTCACATTAACGTTGCTT 59.024 37.500 11.99 0.00 0.00 3.91
369 370 5.458452 CACATTGTCACATTAACGTTGCTTT 59.542 36.000 11.99 0.00 0.00 3.51
370 371 6.634837 CACATTGTCACATTAACGTTGCTTTA 59.365 34.615 11.99 0.00 0.00 1.85
371 372 7.166638 CACATTGTCACATTAACGTTGCTTTAA 59.833 33.333 11.99 0.00 0.00 1.52
372 373 7.865385 ACATTGTCACATTAACGTTGCTTTAAT 59.135 29.630 11.99 0.00 30.70 1.40
373 374 8.698854 CATTGTCACATTAACGTTGCTTTAATT 58.301 29.630 11.99 0.00 28.55 1.40
374 375 9.900710 ATTGTCACATTAACGTTGCTTTAATTA 57.099 25.926 11.99 0.00 28.55 1.40
375 376 9.900710 TTGTCACATTAACGTTGCTTTAATTAT 57.099 25.926 11.99 0.00 28.55 1.28
376 377 9.335891 TGTCACATTAACGTTGCTTTAATTATG 57.664 29.630 11.99 3.67 28.55 1.90
377 378 9.337091 GTCACATTAACGTTGCTTTAATTATGT 57.663 29.630 11.99 4.04 28.55 2.29
380 381 9.777575 ACATTAACGTTGCTTTAATTATGTACC 57.222 29.630 11.99 0.00 28.55 3.34
381 382 9.997482 CATTAACGTTGCTTTAATTATGTACCT 57.003 29.630 11.99 0.00 28.55 3.08
383 384 7.675962 AACGTTGCTTTAATTATGTACCTCA 57.324 32.000 0.00 0.00 0.00 3.86
384 385 7.303634 ACGTTGCTTTAATTATGTACCTCAG 57.696 36.000 0.00 0.00 0.00 3.35
385 386 6.183360 ACGTTGCTTTAATTATGTACCTCAGC 60.183 38.462 0.00 0.00 0.00 4.26
386 387 6.183360 CGTTGCTTTAATTATGTACCTCAGCA 60.183 38.462 0.00 0.00 0.00 4.41
387 388 7.535139 GTTGCTTTAATTATGTACCTCAGCAA 58.465 34.615 0.00 0.00 35.46 3.91
388 389 7.880160 TGCTTTAATTATGTACCTCAGCAAT 57.120 32.000 0.00 0.00 0.00 3.56
389 390 8.292444 TGCTTTAATTATGTACCTCAGCAATT 57.708 30.769 0.00 0.00 32.83 2.32
390 391 9.402320 TGCTTTAATTATGTACCTCAGCAATTA 57.598 29.630 0.00 0.00 31.55 1.40
396 397 9.461312 AATTATGTACCTCAGCAATTAACTTCA 57.539 29.630 0.00 0.00 0.00 3.02
397 398 9.632638 ATTATGTACCTCAGCAATTAACTTCAT 57.367 29.630 0.00 0.00 0.00 2.57
398 399 6.985188 TGTACCTCAGCAATTAACTTCATC 57.015 37.500 0.00 0.00 0.00 2.92
399 400 6.472016 TGTACCTCAGCAATTAACTTCATCA 58.528 36.000 0.00 0.00 0.00 3.07
400 401 7.112122 TGTACCTCAGCAATTAACTTCATCAT 58.888 34.615 0.00 0.00 0.00 2.45
401 402 8.264347 TGTACCTCAGCAATTAACTTCATCATA 58.736 33.333 0.00 0.00 0.00 2.15
402 403 9.109393 GTACCTCAGCAATTAACTTCATCATAA 57.891 33.333 0.00 0.00 0.00 1.90
403 404 8.757982 ACCTCAGCAATTAACTTCATCATAAT 57.242 30.769 0.00 0.00 0.00 1.28
404 405 9.193806 ACCTCAGCAATTAACTTCATCATAATT 57.806 29.630 0.00 0.00 31.25 1.40
445 446 8.763601 AGAATTTAGAAGTATACCTTGAGCAGT 58.236 33.333 0.00 0.00 32.03 4.40
446 447 9.384764 GAATTTAGAAGTATACCTTGAGCAGTT 57.615 33.333 0.00 0.00 32.03 3.16
449 450 8.591114 TTAGAAGTATACCTTGAGCAGTTAGT 57.409 34.615 0.00 0.00 32.03 2.24
450 451 7.483580 AGAAGTATACCTTGAGCAGTTAGTT 57.516 36.000 0.00 0.00 32.03 2.24
451 452 7.324178 AGAAGTATACCTTGAGCAGTTAGTTG 58.676 38.462 0.00 0.00 32.03 3.16
452 453 5.420409 AGTATACCTTGAGCAGTTAGTTGC 58.580 41.667 0.00 0.00 44.41 4.17
453 454 8.059120 GAAGTATACCTTGAGCAGTTAGTTGCT 61.059 40.741 0.00 0.00 44.78 3.91
493 494 7.179076 ACTACCTCCGTCTTAAAATGTATGT 57.821 36.000 0.00 0.00 0.00 2.29
494 495 8.297470 ACTACCTCCGTCTTAAAATGTATGTA 57.703 34.615 0.00 0.00 0.00 2.29
495 496 8.752187 ACTACCTCCGTCTTAAAATGTATGTAA 58.248 33.333 0.00 0.00 0.00 2.41
496 497 9.245962 CTACCTCCGTCTTAAAATGTATGTAAG 57.754 37.037 0.00 0.00 0.00 2.34
497 498 7.844009 ACCTCCGTCTTAAAATGTATGTAAGA 58.156 34.615 0.00 0.00 32.72 2.10
498 499 7.763071 ACCTCCGTCTTAAAATGTATGTAAGAC 59.237 37.037 11.14 11.14 45.31 3.01
509 510 9.887406 AAAATGTATGTAAGACGTTTTTGTAGG 57.113 29.630 0.00 0.00 41.15 3.18
510 511 6.470557 TGTATGTAAGACGTTTTTGTAGGC 57.529 37.500 0.00 0.00 0.00 3.93
511 512 6.225318 TGTATGTAAGACGTTTTTGTAGGCT 58.775 36.000 0.00 0.00 0.00 4.58
512 513 7.377398 TGTATGTAAGACGTTTTTGTAGGCTA 58.623 34.615 0.00 0.00 0.00 3.93
513 514 6.963049 ATGTAAGACGTTTTTGTAGGCTAG 57.037 37.500 0.00 0.00 0.00 3.42
514 515 5.846203 TGTAAGACGTTTTTGTAGGCTAGT 58.154 37.500 0.00 0.00 0.00 2.57
515 516 6.980593 TGTAAGACGTTTTTGTAGGCTAGTA 58.019 36.000 0.00 0.00 0.00 1.82
516 517 6.863126 TGTAAGACGTTTTTGTAGGCTAGTAC 59.137 38.462 0.00 0.00 0.00 2.73
517 518 4.814147 AGACGTTTTTGTAGGCTAGTACC 58.186 43.478 0.00 0.00 0.00 3.34
518 519 4.525874 AGACGTTTTTGTAGGCTAGTACCT 59.474 41.667 0.00 0.00 44.31 3.08
519 520 5.011431 AGACGTTTTTGTAGGCTAGTACCTT 59.989 40.000 0.00 0.00 41.50 3.50
520 521 6.209391 AGACGTTTTTGTAGGCTAGTACCTTA 59.791 38.462 0.00 0.00 41.50 2.69
521 522 6.159293 ACGTTTTTGTAGGCTAGTACCTTAC 58.841 40.000 0.00 0.00 41.50 2.34
522 523 6.158598 CGTTTTTGTAGGCTAGTACCTTACA 58.841 40.000 0.00 0.00 41.50 2.41
523 524 6.646240 CGTTTTTGTAGGCTAGTACCTTACAA 59.354 38.462 0.00 0.00 41.50 2.41
524 525 7.359514 CGTTTTTGTAGGCTAGTACCTTACAAC 60.360 40.741 0.00 0.00 41.50 3.32
525 526 6.669125 TTTGTAGGCTAGTACCTTACAACA 57.331 37.500 0.00 0.00 41.50 3.33
526 527 6.862469 TTGTAGGCTAGTACCTTACAACAT 57.138 37.500 0.00 0.00 41.50 2.71
527 528 7.959658 TTGTAGGCTAGTACCTTACAACATA 57.040 36.000 0.00 0.00 41.50 2.29
528 529 7.338800 TGTAGGCTAGTACCTTACAACATAC 57.661 40.000 0.00 0.00 41.50 2.39
529 530 7.121382 TGTAGGCTAGTACCTTACAACATACT 58.879 38.462 0.00 0.00 41.50 2.12
530 531 7.616935 TGTAGGCTAGTACCTTACAACATACTT 59.383 37.037 0.00 0.00 41.50 2.24
531 532 7.492077 AGGCTAGTACCTTACAACATACTTT 57.508 36.000 0.00 0.00 36.28 2.66
532 533 7.914859 AGGCTAGTACCTTACAACATACTTTT 58.085 34.615 0.00 0.00 36.28 2.27
533 534 8.380867 AGGCTAGTACCTTACAACATACTTTTT 58.619 33.333 0.00 0.00 36.28 1.94
559 560 8.641499 TTTTTGCATTTTAGTTGACTGGTAAG 57.359 30.769 0.00 0.00 0.00 2.34
560 561 6.952773 TTGCATTTTAGTTGACTGGTAAGT 57.047 33.333 0.00 0.00 40.21 2.24
575 576 7.016153 ACTGGTAAGTCAAATAGGATTGTCA 57.984 36.000 0.00 0.00 26.77 3.58
576 577 7.458397 ACTGGTAAGTCAAATAGGATTGTCAA 58.542 34.615 0.00 0.00 26.77 3.18
577 578 7.607991 ACTGGTAAGTCAAATAGGATTGTCAAG 59.392 37.037 0.00 0.00 26.77 3.02
578 579 6.374333 TGGTAAGTCAAATAGGATTGTCAAGC 59.626 38.462 0.00 0.00 0.00 4.01
579 580 5.904362 AAGTCAAATAGGATTGTCAAGCC 57.096 39.130 12.11 12.11 37.16 4.35
580 581 3.941483 AGTCAAATAGGATTGTCAAGCCG 59.059 43.478 14.04 0.00 43.19 5.52
581 582 3.689649 GTCAAATAGGATTGTCAAGCCGT 59.310 43.478 14.04 4.72 43.19 5.68
582 583 3.689161 TCAAATAGGATTGTCAAGCCGTG 59.311 43.478 14.04 10.87 43.19 4.94
583 584 3.350219 AATAGGATTGTCAAGCCGTGT 57.650 42.857 14.04 0.00 43.19 4.49
584 585 2.380084 TAGGATTGTCAAGCCGTGTC 57.620 50.000 14.04 0.00 43.19 3.67
585 586 0.321653 AGGATTGTCAAGCCGTGTCC 60.322 55.000 14.04 3.53 43.19 4.02
586 587 0.605319 GGATTGTCAAGCCGTGTCCA 60.605 55.000 3.67 0.00 0.00 4.02
587 588 1.453155 GATTGTCAAGCCGTGTCCAT 58.547 50.000 0.00 0.00 0.00 3.41
588 589 1.812571 GATTGTCAAGCCGTGTCCATT 59.187 47.619 0.00 0.00 0.00 3.16
589 590 0.950836 TTGTCAAGCCGTGTCCATTG 59.049 50.000 0.00 0.00 0.00 2.82
590 591 0.179032 TGTCAAGCCGTGTCCATTGT 60.179 50.000 0.00 0.00 0.00 2.71
591 592 0.517316 GTCAAGCCGTGTCCATTGTC 59.483 55.000 0.00 0.00 0.00 3.18
592 593 0.107643 TCAAGCCGTGTCCATTGTCA 59.892 50.000 0.00 0.00 0.00 3.58
593 594 0.950836 CAAGCCGTGTCCATTGTCAA 59.049 50.000 0.00 0.00 0.00 3.18
594 595 0.951558 AAGCCGTGTCCATTGTCAAC 59.048 50.000 0.00 0.00 0.00 3.18
595 596 0.179032 AGCCGTGTCCATTGTCAACA 60.179 50.000 0.00 0.00 0.00 3.33
596 597 0.665835 GCCGTGTCCATTGTCAACAA 59.334 50.000 0.00 0.00 40.51 2.83
597 598 1.599419 GCCGTGTCCATTGTCAACAAC 60.599 52.381 0.00 0.00 38.86 3.32
598 599 1.001815 CCGTGTCCATTGTCAACAACC 60.002 52.381 0.00 0.00 38.86 3.77
599 600 1.001815 CGTGTCCATTGTCAACAACCC 60.002 52.381 0.00 0.00 38.86 4.11
600 601 2.028130 GTGTCCATTGTCAACAACCCA 58.972 47.619 0.00 0.00 38.86 4.51
601 602 2.627699 GTGTCCATTGTCAACAACCCAT 59.372 45.455 0.00 0.00 38.86 4.00
602 603 2.890311 TGTCCATTGTCAACAACCCATC 59.110 45.455 0.00 0.00 38.86 3.51
603 604 3.157087 GTCCATTGTCAACAACCCATCT 58.843 45.455 0.00 0.00 38.86 2.90
604 605 4.202514 TGTCCATTGTCAACAACCCATCTA 60.203 41.667 0.00 0.00 38.86 1.98
605 606 4.156008 GTCCATTGTCAACAACCCATCTAC 59.844 45.833 0.00 0.00 38.86 2.59
606 607 4.078537 CCATTGTCAACAACCCATCTACA 58.921 43.478 0.00 0.00 38.86 2.74
607 608 4.522405 CCATTGTCAACAACCCATCTACAA 59.478 41.667 0.00 0.00 38.86 2.41
608 609 5.010516 CCATTGTCAACAACCCATCTACAAA 59.989 40.000 0.00 0.00 38.86 2.83
609 610 6.295236 CCATTGTCAACAACCCATCTACAAAT 60.295 38.462 0.00 0.00 38.86 2.32
610 611 7.093988 CCATTGTCAACAACCCATCTACAAATA 60.094 37.037 0.00 0.00 38.86 1.40
611 612 6.811253 TGTCAACAACCCATCTACAAATAC 57.189 37.500 0.00 0.00 0.00 1.89
612 613 6.299922 TGTCAACAACCCATCTACAAATACA 58.700 36.000 0.00 0.00 0.00 2.29
613 614 6.205853 TGTCAACAACCCATCTACAAATACAC 59.794 38.462 0.00 0.00 0.00 2.90
614 615 5.708230 TCAACAACCCATCTACAAATACACC 59.292 40.000 0.00 0.00 0.00 4.16
615 616 5.514500 ACAACCCATCTACAAATACACCT 57.486 39.130 0.00 0.00 0.00 4.00
616 617 5.887754 ACAACCCATCTACAAATACACCTT 58.112 37.500 0.00 0.00 0.00 3.50
617 618 5.710099 ACAACCCATCTACAAATACACCTTG 59.290 40.000 0.00 0.00 0.00 3.61
618 619 4.270008 ACCCATCTACAAATACACCTTGC 58.730 43.478 0.00 0.00 0.00 4.01
619 620 4.263727 ACCCATCTACAAATACACCTTGCA 60.264 41.667 0.00 0.00 0.00 4.08
620 621 4.889409 CCCATCTACAAATACACCTTGCAT 59.111 41.667 0.00 0.00 0.00 3.96
621 622 5.221106 CCCATCTACAAATACACCTTGCATG 60.221 44.000 0.00 0.00 0.00 4.06
622 623 5.589855 CCATCTACAAATACACCTTGCATGA 59.410 40.000 0.00 0.00 0.00 3.07
623 624 6.095300 CCATCTACAAATACACCTTGCATGAA 59.905 38.462 0.00 0.00 0.00 2.57
624 625 7.201848 CCATCTACAAATACACCTTGCATGAAT 60.202 37.037 0.00 0.00 0.00 2.57
625 626 7.087409 TCTACAAATACACCTTGCATGAATG 57.913 36.000 0.00 2.08 0.00 2.67
640 641 0.727122 GAATGCGCACACAGCTTGAC 60.727 55.000 14.90 0.00 42.61 3.18
658 659 5.739070 GCTTGACTATGGTCCAATACGATCA 60.739 44.000 6.77 0.00 41.47 2.92
659 660 5.862678 TGACTATGGTCCAATACGATCAA 57.137 39.130 6.77 0.00 41.47 2.57
660 661 5.842907 TGACTATGGTCCAATACGATCAAG 58.157 41.667 6.77 0.00 41.47 3.02
661 662 5.362717 TGACTATGGTCCAATACGATCAAGT 59.637 40.000 6.77 0.00 41.47 3.16
662 663 6.548251 TGACTATGGTCCAATACGATCAAGTA 59.452 38.462 6.77 0.00 41.47 2.24
663 664 7.232737 TGACTATGGTCCAATACGATCAAGTAT 59.767 37.037 6.77 0.00 41.47 2.12
664 665 7.603651 ACTATGGTCCAATACGATCAAGTATC 58.396 38.462 0.00 0.00 36.39 2.24
665 666 6.672266 ATGGTCCAATACGATCAAGTATCT 57.328 37.500 0.00 0.00 36.39 1.98
666 667 7.776618 ATGGTCCAATACGATCAAGTATCTA 57.223 36.000 0.00 0.00 36.39 1.98
667 668 7.776618 TGGTCCAATACGATCAAGTATCTAT 57.223 36.000 0.00 0.00 36.39 1.98
668 669 7.827701 TGGTCCAATACGATCAAGTATCTATC 58.172 38.462 0.00 0.00 36.39 2.08
669 670 7.450323 TGGTCCAATACGATCAAGTATCTATCA 59.550 37.037 0.00 0.00 36.39 2.15
670 671 7.755822 GGTCCAATACGATCAAGTATCTATCAC 59.244 40.741 0.00 0.00 36.39 3.06
671 672 8.516234 GTCCAATACGATCAAGTATCTATCACT 58.484 37.037 0.00 0.00 36.39 3.41
672 673 8.515414 TCCAATACGATCAAGTATCTATCACTG 58.485 37.037 0.00 0.00 36.39 3.66
673 674 7.757173 CCAATACGATCAAGTATCTATCACTGG 59.243 40.741 0.00 0.00 36.39 4.00
674 675 5.127693 ACGATCAAGTATCTATCACTGGC 57.872 43.478 0.00 0.00 31.87 4.85
675 676 4.162072 CGATCAAGTATCTATCACTGGCG 58.838 47.826 0.00 0.00 31.87 5.69
676 677 4.083271 CGATCAAGTATCTATCACTGGCGA 60.083 45.833 0.00 0.00 31.87 5.54
677 678 4.837896 TCAAGTATCTATCACTGGCGAG 57.162 45.455 0.00 0.00 0.00 5.03
678 679 4.207955 TCAAGTATCTATCACTGGCGAGT 58.792 43.478 0.00 0.00 0.00 4.18
679 680 4.645136 TCAAGTATCTATCACTGGCGAGTT 59.355 41.667 0.00 0.00 0.00 3.01
680 681 5.826208 TCAAGTATCTATCACTGGCGAGTTA 59.174 40.000 0.00 0.00 0.00 2.24
681 682 6.320418 TCAAGTATCTATCACTGGCGAGTTAA 59.680 38.462 0.00 0.00 0.00 2.01
682 683 6.710597 AGTATCTATCACTGGCGAGTTAAA 57.289 37.500 0.00 0.00 0.00 1.52
683 684 7.108841 AGTATCTATCACTGGCGAGTTAAAA 57.891 36.000 0.00 0.00 0.00 1.52
684 685 7.553334 AGTATCTATCACTGGCGAGTTAAAAA 58.447 34.615 0.00 0.00 0.00 1.94
758 759 0.907486 GGACCCCAGTGTAGTAACCC 59.093 60.000 0.00 0.00 0.00 4.11
784 785 1.318576 CTTTCAAAGTTCCCGCCACT 58.681 50.000 0.00 0.00 0.00 4.00
787 788 0.534203 TCAAAGTTCCCGCCACTGAC 60.534 55.000 0.00 0.00 0.00 3.51
799 800 1.367471 CACTGACAAGTCGGCTGGA 59.633 57.895 0.00 0.00 39.55 3.86
881 883 2.037251 CTGGTCCGTCCATCCGAAATAT 59.963 50.000 0.00 0.00 46.12 1.28
883 885 2.036733 GGTCCGTCCATCCGAAATATCA 59.963 50.000 0.00 0.00 35.97 2.15
975 977 6.265876 CCTGTCTCCTCTTACCTATAAAGACC 59.734 46.154 0.00 0.00 32.80 3.85
986 988 0.697854 ATAAAGACCCCGGCCCATCT 60.698 55.000 0.00 0.00 0.00 2.90
1058 1063 1.740585 TCTCTCTCGCCTTCGAAGAAG 59.259 52.381 26.61 18.62 45.90 2.85
1059 1064 0.171455 TCTCTCGCCTTCGAAGAAGC 59.829 55.000 26.61 19.76 45.90 3.86
1060 1065 0.109086 CTCTCGCCTTCGAAGAAGCA 60.109 55.000 26.61 11.31 45.90 3.91
1061 1066 0.109086 TCTCGCCTTCGAAGAAGCAG 60.109 55.000 26.61 18.61 45.90 4.24
1062 1067 1.691215 CTCGCCTTCGAAGAAGCAGC 61.691 60.000 26.61 18.35 45.90 5.25
1063 1068 2.029288 CGCCTTCGAAGAAGCAGCA 61.029 57.895 26.61 0.00 45.90 4.41
1064 1069 1.792941 GCCTTCGAAGAAGCAGCAG 59.207 57.895 26.61 8.01 45.90 4.24
1065 1070 1.792941 CCTTCGAAGAAGCAGCAGC 59.207 57.895 26.61 0.00 45.90 5.25
1066 1071 1.642952 CCTTCGAAGAAGCAGCAGCC 61.643 60.000 26.61 0.00 45.90 4.85
1216 1221 0.036858 AGAAGGCCAAGAAGAGCGTC 60.037 55.000 5.01 0.00 0.00 5.19
1345 1350 3.941657 GAAGCTTGCCGGCGAGTCT 62.942 63.158 37.89 31.41 37.29 3.24
1357 1362 2.817396 GAGTCTGCCAAGCTCGCC 60.817 66.667 3.48 0.00 0.00 5.54
1528 1533 5.294552 AGTTCTTGTGTTTCTTTCCTCTTCG 59.705 40.000 0.00 0.00 0.00 3.79
1577 1582 2.035321 TGTGTGTTCTGACAGCGTCATA 59.965 45.455 10.93 3.02 41.94 2.15
1664 1704 3.181465 GGATTCAGTTTCATCTCGGGCTA 60.181 47.826 0.00 0.00 0.00 3.93
1684 1725 2.797177 AGAGCTGGGAAGATGGTTTC 57.203 50.000 0.00 0.00 0.00 2.78
1685 1726 2.273619 AGAGCTGGGAAGATGGTTTCT 58.726 47.619 0.00 0.00 35.70 2.52
1686 1727 8.983069 GCTAAGAGCTGGGAAGATGGTTTCTT 62.983 46.154 0.00 0.00 41.96 2.52
1707 1748 7.194607 TCTTATCTCTGAAAGTTTTGCACAG 57.805 36.000 0.00 0.00 33.76 3.66
1767 1808 1.267121 TGGAGTTCCACTCAGGTAGC 58.733 55.000 6.25 0.00 46.79 3.58
1780 1935 5.182001 CACTCAGGTAGCAAAGCTTGTATTT 59.818 40.000 0.00 0.00 40.44 1.40
1834 1989 6.923199 AATCAAGGATCTGAAATGGTTTGT 57.077 33.333 0.00 0.00 0.00 2.83
1838 1993 6.603201 TCAAGGATCTGAAATGGTTTGTATCC 59.397 38.462 0.00 0.00 33.36 2.59
1841 1996 4.946160 TCTGAAATGGTTTGTATCCCCT 57.054 40.909 0.00 0.00 0.00 4.79
1842 1997 6.410388 GGATCTGAAATGGTTTGTATCCCCTA 60.410 42.308 0.00 0.00 0.00 3.53
1866 2021 9.571804 CTAGCAATTTTTCTTTGAAATTTCACG 57.428 29.630 20.35 14.07 35.21 4.35
1891 2047 2.447443 GAGATTTTCCCCCACCTGAAC 58.553 52.381 0.00 0.00 0.00 3.18
1907 2063 8.364142 CCCACCTGAACTTTTTATCATTAACAA 58.636 33.333 0.00 0.00 0.00 2.83
1977 3046 3.679389 CAGGTAGGCAAGAACACAAGAT 58.321 45.455 0.00 0.00 0.00 2.40
1997 3066 0.605319 TAGGCAGCCAACGTTTCAGG 60.605 55.000 15.80 0.00 0.00 3.86
2000 3069 1.165270 GCAGCCAACGTTTCAGGTAT 58.835 50.000 0.00 0.00 0.00 2.73
2007 3076 3.188460 CCAACGTTTCAGGTATTCAGGTG 59.812 47.826 0.00 0.00 0.00 4.00
2011 3080 3.010420 GTTTCAGGTATTCAGGTGAGCC 58.990 50.000 0.00 0.00 0.00 4.70
2071 3140 7.919091 CCCATTTGTTTCAGATAATCAGATGTG 59.081 37.037 0.00 0.00 0.00 3.21
2077 3146 5.883685 TCAGATAATCAGATGTGAAGCCT 57.116 39.130 0.00 0.00 35.88 4.58
2105 3174 4.401519 AGCAGTGATTTGATTGGGAAGATG 59.598 41.667 0.00 0.00 0.00 2.90
2117 3186 7.054124 TGATTGGGAAGATGTAACCAGATAAC 58.946 38.462 0.00 0.00 33.96 1.89
2143 8972 4.994220 TTGTTTGATACGCACGTACATT 57.006 36.364 4.84 0.00 33.01 2.71
2165 8994 8.156165 ACATTTACACATTTGATTTGATTGGGT 58.844 29.630 0.00 0.00 0.00 4.51
2265 9117 2.699954 ACCACAAACTAAGCCTCGATG 58.300 47.619 0.00 0.00 0.00 3.84
2369 9228 1.402968 CGCCATGGGATCTTTGTCTTG 59.597 52.381 15.13 0.00 0.00 3.02
2370 9229 1.135721 GCCATGGGATCTTTGTCTTGC 59.864 52.381 15.13 0.00 0.00 4.01
2425 9727 9.521841 AGATATACATAACGAAGAATCAGAGGA 57.478 33.333 0.00 0.00 0.00 3.71
2455 9757 3.502211 GCTACTAAGCTTGGTTGAGCAAA 59.498 43.478 24.73 6.11 45.85 3.68
2464 9766 4.267690 GCTTGGTTGAGCAAAACTTAACAC 59.732 41.667 3.27 0.00 44.58 3.32
2532 9835 3.210012 ATGTGTGGGTCAGGCCACC 62.210 63.158 5.01 4.16 39.65 4.61
2538 9841 2.515901 GGTCAGGCCACCACAACT 59.484 61.111 5.01 0.00 36.32 3.16
2549 9852 5.007682 GGCCACCACAACTAAGAGAAATTA 58.992 41.667 0.00 0.00 0.00 1.40
2553 9856 6.375455 CCACCACAACTAAGAGAAATTATGCT 59.625 38.462 0.00 0.00 0.00 3.79
2555 9858 7.965107 CACCACAACTAAGAGAAATTATGCTTC 59.035 37.037 0.00 0.00 0.00 3.86
2589 9892 0.041312 CAACGCTTTTGTGAGGACCG 60.041 55.000 0.00 0.00 0.00 4.79
2592 9895 1.841663 CGCTTTTGTGAGGACCGGTG 61.842 60.000 14.63 0.00 0.00 4.94
2593 9896 1.949257 CTTTTGTGAGGACCGGTGC 59.051 57.895 19.86 19.86 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 9.120538 GGAGTACCTAGATCATGCAAAAATTAA 57.879 33.333 0.00 0.00 0.00 1.40
46 47 8.271458 TGGAGTACCTAGATCATGCAAAAATTA 58.729 33.333 0.00 0.00 37.04 1.40
47 48 7.118723 TGGAGTACCTAGATCATGCAAAAATT 58.881 34.615 0.00 0.00 37.04 1.82
48 49 6.662755 TGGAGTACCTAGATCATGCAAAAAT 58.337 36.000 0.00 0.00 37.04 1.82
49 50 6.061022 TGGAGTACCTAGATCATGCAAAAA 57.939 37.500 0.00 0.00 37.04 1.94
50 51 5.692115 TGGAGTACCTAGATCATGCAAAA 57.308 39.130 0.00 0.00 37.04 2.44
51 52 5.604231 AGATGGAGTACCTAGATCATGCAAA 59.396 40.000 0.00 0.00 37.04 3.68
52 53 5.150715 AGATGGAGTACCTAGATCATGCAA 58.849 41.667 0.00 0.00 37.04 4.08
53 54 4.745351 AGATGGAGTACCTAGATCATGCA 58.255 43.478 0.00 0.00 37.04 3.96
54 55 5.736951 AAGATGGAGTACCTAGATCATGC 57.263 43.478 0.00 0.00 37.04 4.06
71 72 3.314635 GCAAGCTCCAACTCCATAAGATG 59.685 47.826 0.00 0.00 0.00 2.90
72 73 3.201708 AGCAAGCTCCAACTCCATAAGAT 59.798 43.478 0.00 0.00 0.00 2.40
73 74 2.573462 AGCAAGCTCCAACTCCATAAGA 59.427 45.455 0.00 0.00 0.00 2.10
74 75 2.996631 AGCAAGCTCCAACTCCATAAG 58.003 47.619 0.00 0.00 0.00 1.73
75 76 3.439857 AAGCAAGCTCCAACTCCATAA 57.560 42.857 0.00 0.00 0.00 1.90
76 77 3.263170 TGTAAGCAAGCTCCAACTCCATA 59.737 43.478 0.00 0.00 0.00 2.74
77 78 2.040278 TGTAAGCAAGCTCCAACTCCAT 59.960 45.455 0.00 0.00 0.00 3.41
78 79 1.419762 TGTAAGCAAGCTCCAACTCCA 59.580 47.619 0.00 0.00 0.00 3.86
79 80 1.807142 GTGTAAGCAAGCTCCAACTCC 59.193 52.381 0.00 0.00 0.00 3.85
80 81 2.772287 AGTGTAAGCAAGCTCCAACTC 58.228 47.619 0.00 0.00 0.00 3.01
81 82 2.938956 AGTGTAAGCAAGCTCCAACT 57.061 45.000 0.00 0.00 0.00 3.16
82 83 4.003648 ACATAGTGTAAGCAAGCTCCAAC 58.996 43.478 0.00 0.00 0.00 3.77
83 84 4.286297 ACATAGTGTAAGCAAGCTCCAA 57.714 40.909 0.00 0.00 0.00 3.53
84 85 3.981071 ACATAGTGTAAGCAAGCTCCA 57.019 42.857 0.00 0.00 0.00 3.86
85 86 5.220416 CGTTAACATAGTGTAAGCAAGCTCC 60.220 44.000 6.39 0.00 0.00 4.70
86 87 5.220416 CCGTTAACATAGTGTAAGCAAGCTC 60.220 44.000 6.39 0.00 0.00 4.09
87 88 4.630069 CCGTTAACATAGTGTAAGCAAGCT 59.370 41.667 6.39 0.00 0.00 3.74
88 89 4.726876 GCCGTTAACATAGTGTAAGCAAGC 60.727 45.833 6.39 0.00 0.00 4.01
89 90 4.201783 GGCCGTTAACATAGTGTAAGCAAG 60.202 45.833 6.39 0.00 0.00 4.01
90 91 3.685756 GGCCGTTAACATAGTGTAAGCAA 59.314 43.478 6.39 0.00 0.00 3.91
91 92 3.264104 GGCCGTTAACATAGTGTAAGCA 58.736 45.455 6.39 0.00 0.00 3.91
92 93 2.283351 CGGCCGTTAACATAGTGTAAGC 59.717 50.000 19.50 0.00 0.00 3.09
93 94 3.514645 ACGGCCGTTAACATAGTGTAAG 58.485 45.455 28.70 0.00 0.00 2.34
94 95 3.591196 ACGGCCGTTAACATAGTGTAA 57.409 42.857 28.70 0.00 0.00 2.41
95 96 3.591196 AACGGCCGTTAACATAGTGTA 57.409 42.857 40.67 0.00 36.46 2.90
96 97 2.460757 AACGGCCGTTAACATAGTGT 57.539 45.000 40.67 14.36 36.46 3.55
97 98 3.514645 AGTAACGGCCGTTAACATAGTG 58.485 45.455 43.23 8.33 41.51 2.74
98 99 3.731867 CGAGTAACGGCCGTTAACATAGT 60.732 47.826 43.23 30.00 41.51 2.12
99 100 2.785477 CGAGTAACGGCCGTTAACATAG 59.215 50.000 43.23 29.16 41.51 2.23
100 101 2.796304 CGAGTAACGGCCGTTAACATA 58.204 47.619 43.23 26.78 41.51 2.29
101 102 1.632422 CGAGTAACGGCCGTTAACAT 58.368 50.000 43.23 32.90 41.51 2.71
102 103 1.008361 GCGAGTAACGGCCGTTAACA 61.008 55.000 43.23 27.52 41.51 2.41
103 104 1.704010 GCGAGTAACGGCCGTTAAC 59.296 57.895 43.23 35.62 41.51 2.01
104 105 1.801113 CGCGAGTAACGGCCGTTAA 60.801 57.895 43.23 28.10 41.51 2.01
105 106 2.202466 CGCGAGTAACGGCCGTTA 60.202 61.111 39.67 39.67 42.83 3.18
114 115 4.824166 GAGACGGCGCGCGAGTAA 62.824 66.667 37.18 0.00 0.00 2.24
127 128 3.735029 ACGTGGCGAGACGGAGAC 61.735 66.667 10.81 0.00 43.84 3.36
128 129 3.733960 CACGTGGCGAGACGGAGA 61.734 66.667 7.95 0.00 43.84 3.71
129 130 4.778415 CCACGTGGCGAGACGGAG 62.778 72.222 24.02 0.00 43.84 4.63
132 133 4.337060 TGACCACGTGGCGAGACG 62.337 66.667 34.26 9.41 45.09 4.18
133 134 2.430921 CTGACCACGTGGCGAGAC 60.431 66.667 34.26 19.39 39.32 3.36
134 135 2.023414 AAACTGACCACGTGGCGAGA 62.023 55.000 34.26 14.31 39.32 4.04
135 136 1.594293 AAACTGACCACGTGGCGAG 60.594 57.895 34.26 28.89 39.32 5.03
136 137 1.885388 CAAACTGACCACGTGGCGA 60.885 57.895 34.26 19.52 39.32 5.54
137 138 2.631428 CAAACTGACCACGTGGCG 59.369 61.111 34.26 23.60 39.32 5.69
138 139 2.331451 GCAAACTGACCACGTGGC 59.669 61.111 34.26 25.37 39.32 5.01
139 140 1.785041 CTGGCAAACTGACCACGTGG 61.785 60.000 32.83 32.83 42.17 4.94
140 141 1.648720 CTGGCAAACTGACCACGTG 59.351 57.895 9.08 9.08 0.00 4.49
141 142 1.525995 CCTGGCAAACTGACCACGT 60.526 57.895 0.00 0.00 0.00 4.49
142 143 1.507141 GACCTGGCAAACTGACCACG 61.507 60.000 0.00 0.00 0.00 4.94
143 144 0.465460 TGACCTGGCAAACTGACCAC 60.465 55.000 0.00 0.00 0.00 4.16
144 145 0.257328 TTGACCTGGCAAACTGACCA 59.743 50.000 0.00 0.00 0.00 4.02
145 146 1.398692 TTTGACCTGGCAAACTGACC 58.601 50.000 10.79 0.00 33.16 4.02
146 147 2.165437 TGTTTTGACCTGGCAAACTGAC 59.835 45.455 13.40 10.74 37.48 3.51
147 148 2.451490 TGTTTTGACCTGGCAAACTGA 58.549 42.857 13.40 0.95 37.48 3.41
148 149 2.957491 TGTTTTGACCTGGCAAACTG 57.043 45.000 13.40 0.00 37.48 3.16
149 150 2.483538 GCATGTTTTGACCTGGCAAACT 60.484 45.455 13.40 2.87 37.48 2.66
150 151 1.866601 GCATGTTTTGACCTGGCAAAC 59.133 47.619 13.40 11.14 37.48 2.93
151 152 1.761784 AGCATGTTTTGACCTGGCAAA 59.238 42.857 10.79 10.79 36.08 3.68
152 153 1.340889 GAGCATGTTTTGACCTGGCAA 59.659 47.619 0.00 0.00 0.00 4.52
153 154 0.961019 GAGCATGTTTTGACCTGGCA 59.039 50.000 0.00 0.00 0.00 4.92
154 155 0.961019 TGAGCATGTTTTGACCTGGC 59.039 50.000 0.00 0.00 0.00 4.85
155 156 3.731652 TTTGAGCATGTTTTGACCTGG 57.268 42.857 0.00 0.00 0.00 4.45
191 192 5.753921 ACCGAATTTTTAATGGCGTCAAAAA 59.246 32.000 3.09 3.09 36.06 1.94
192 193 5.175856 CACCGAATTTTTAATGGCGTCAAAA 59.824 36.000 0.00 0.00 0.00 2.44
193 194 4.681942 CACCGAATTTTTAATGGCGTCAAA 59.318 37.500 0.00 0.00 0.00 2.69
194 195 4.230657 CACCGAATTTTTAATGGCGTCAA 58.769 39.130 0.00 0.00 0.00 3.18
195 196 3.827625 CACCGAATTTTTAATGGCGTCA 58.172 40.909 0.00 0.00 0.00 4.35
196 197 2.596862 GCACCGAATTTTTAATGGCGTC 59.403 45.455 0.00 0.00 0.00 5.19
197 198 2.601804 GCACCGAATTTTTAATGGCGT 58.398 42.857 0.00 0.00 0.00 5.68
198 199 1.581602 CGCACCGAATTTTTAATGGCG 59.418 47.619 0.00 0.00 35.87 5.69
199 200 1.923864 CCGCACCGAATTTTTAATGGC 59.076 47.619 0.00 0.00 0.00 4.40
200 201 2.920490 CACCGCACCGAATTTTTAATGG 59.080 45.455 0.00 0.00 0.00 3.16
201 202 2.344142 GCACCGCACCGAATTTTTAATG 59.656 45.455 0.00 0.00 0.00 1.90
202 203 2.029828 TGCACCGCACCGAATTTTTAAT 60.030 40.909 0.00 0.00 31.71 1.40
203 204 1.337071 TGCACCGCACCGAATTTTTAA 59.663 42.857 0.00 0.00 31.71 1.52
204 205 0.952280 TGCACCGCACCGAATTTTTA 59.048 45.000 0.00 0.00 31.71 1.52
205 206 0.103208 TTGCACCGCACCGAATTTTT 59.897 45.000 0.00 0.00 38.71 1.94
206 207 0.103208 TTTGCACCGCACCGAATTTT 59.897 45.000 0.00 0.00 38.71 1.82
207 208 0.103208 TTTTGCACCGCACCGAATTT 59.897 45.000 0.00 0.00 38.71 1.82
208 209 0.316841 ATTTTGCACCGCACCGAATT 59.683 45.000 0.00 0.00 38.71 2.17
209 210 0.388391 CATTTTGCACCGCACCGAAT 60.388 50.000 0.00 0.00 38.71 3.34
210 211 1.007964 CATTTTGCACCGCACCGAA 60.008 52.632 0.00 0.00 38.71 4.30
211 212 2.642129 CATTTTGCACCGCACCGA 59.358 55.556 0.00 0.00 38.71 4.69
212 213 2.430582 CCATTTTGCACCGCACCG 60.431 61.111 0.00 0.00 38.71 4.94
213 214 2.738139 GCCATTTTGCACCGCACC 60.738 61.111 0.00 0.00 38.71 5.01
214 215 2.028778 TGCCATTTTGCACCGCAC 59.971 55.556 0.00 0.00 38.71 5.34
220 221 0.595588 ACGATTCGTGCCATTTTGCA 59.404 45.000 11.56 0.00 39.18 4.08
221 222 2.535934 TACGATTCGTGCCATTTTGC 57.464 45.000 21.40 0.00 41.39 3.68
222 223 4.472286 ACTTTACGATTCGTGCCATTTTG 58.528 39.130 21.40 5.79 41.39 2.44
223 224 4.759516 ACTTTACGATTCGTGCCATTTT 57.240 36.364 21.40 0.00 41.39 1.82
224 225 4.759516 AACTTTACGATTCGTGCCATTT 57.240 36.364 21.40 5.67 41.39 2.32
225 226 5.729454 GCATAACTTTACGATTCGTGCCATT 60.729 40.000 21.40 12.45 41.39 3.16
226 227 4.260620 GCATAACTTTACGATTCGTGCCAT 60.261 41.667 21.40 6.75 41.39 4.40
227 228 3.062909 GCATAACTTTACGATTCGTGCCA 59.937 43.478 21.40 0.00 41.39 4.92
228 229 3.308866 AGCATAACTTTACGATTCGTGCC 59.691 43.478 21.40 0.00 41.39 5.01
229 230 4.516092 AGCATAACTTTACGATTCGTGC 57.484 40.909 21.40 13.02 41.39 5.34
251 252 7.201591 CCACATTTGTGTCACAATTAGCAAAAA 60.202 33.333 18.83 1.51 44.21 1.94
252 253 6.257411 CCACATTTGTGTCACAATTAGCAAAA 59.743 34.615 18.83 2.23 44.21 2.44
253 254 5.752472 CCACATTTGTGTCACAATTAGCAAA 59.248 36.000 18.83 2.97 44.21 3.68
254 255 5.163468 ACCACATTTGTGTCACAATTAGCAA 60.163 36.000 18.83 3.69 44.21 3.91
255 256 4.340666 ACCACATTTGTGTCACAATTAGCA 59.659 37.500 18.83 4.42 44.21 3.49
256 257 4.681025 CACCACATTTGTGTCACAATTAGC 59.319 41.667 18.83 0.00 44.21 3.09
257 258 5.221224 ACCACCACATTTGTGTCACAATTAG 60.221 40.000 18.83 13.47 44.21 1.73
258 259 4.646945 ACCACCACATTTGTGTCACAATTA 59.353 37.500 18.83 5.91 44.21 1.40
259 260 3.450457 ACCACCACATTTGTGTCACAATT 59.550 39.130 18.83 12.65 44.21 2.32
260 261 3.030291 ACCACCACATTTGTGTCACAAT 58.970 40.909 18.83 6.97 44.21 2.71
261 262 2.451490 ACCACCACATTTGTGTCACAA 58.549 42.857 14.48 14.48 44.21 3.33
262 263 2.136298 ACCACCACATTTGTGTCACA 57.864 45.000 0.18 0.18 44.21 3.58
263 264 2.687935 AGAACCACCACATTTGTGTCAC 59.312 45.455 9.66 0.00 44.21 3.67
264 265 2.687425 CAGAACCACCACATTTGTGTCA 59.313 45.455 9.66 0.00 44.21 3.58
265 266 2.687935 ACAGAACCACCACATTTGTGTC 59.312 45.455 9.66 0.87 44.21 3.67
266 267 2.426738 CACAGAACCACCACATTTGTGT 59.573 45.455 9.66 0.00 44.21 3.72
267 268 2.223782 CCACAGAACCACCACATTTGTG 60.224 50.000 3.67 3.67 45.23 3.33
268 269 2.031120 CCACAGAACCACCACATTTGT 58.969 47.619 0.00 0.00 0.00 2.83
269 270 2.305928 TCCACAGAACCACCACATTTG 58.694 47.619 0.00 0.00 0.00 2.32
270 271 2.746279 TCCACAGAACCACCACATTT 57.254 45.000 0.00 0.00 0.00 2.32
271 272 2.978156 ATCCACAGAACCACCACATT 57.022 45.000 0.00 0.00 0.00 2.71
272 273 2.978156 AATCCACAGAACCACCACAT 57.022 45.000 0.00 0.00 0.00 3.21
273 274 2.746279 AAATCCACAGAACCACCACA 57.254 45.000 0.00 0.00 0.00 4.17
274 275 4.142038 AGTAAAATCCACAGAACCACCAC 58.858 43.478 0.00 0.00 0.00 4.16
275 276 4.394729 GAGTAAAATCCACAGAACCACCA 58.605 43.478 0.00 0.00 0.00 4.17
276 277 3.756963 GGAGTAAAATCCACAGAACCACC 59.243 47.826 0.00 0.00 39.34 4.61
277 278 4.394729 TGGAGTAAAATCCACAGAACCAC 58.605 43.478 0.00 0.00 44.56 4.16
278 279 4.715534 TGGAGTAAAATCCACAGAACCA 57.284 40.909 0.00 0.00 44.56 3.67
290 291 9.967451 TCACATATCTTTATGGTTGGAGTAAAA 57.033 29.630 0.00 0.00 39.69 1.52
291 292 9.391006 GTCACATATCTTTATGGTTGGAGTAAA 57.609 33.333 0.00 0.00 39.69 2.01
292 293 8.768397 AGTCACATATCTTTATGGTTGGAGTAA 58.232 33.333 0.00 0.00 39.69 2.24
293 294 8.319057 AGTCACATATCTTTATGGTTGGAGTA 57.681 34.615 0.00 0.00 39.69 2.59
294 295 7.200434 AGTCACATATCTTTATGGTTGGAGT 57.800 36.000 0.00 0.00 39.69 3.85
295 296 7.770433 TCAAGTCACATATCTTTATGGTTGGAG 59.230 37.037 0.00 0.00 39.69 3.86
296 297 7.629157 TCAAGTCACATATCTTTATGGTTGGA 58.371 34.615 0.00 0.00 39.69 3.53
297 298 7.864108 TCAAGTCACATATCTTTATGGTTGG 57.136 36.000 0.00 0.00 39.69 3.77
298 299 9.112725 TCATCAAGTCACATATCTTTATGGTTG 57.887 33.333 0.00 0.00 39.69 3.77
299 300 9.857656 ATCATCAAGTCACATATCTTTATGGTT 57.142 29.630 0.00 0.00 39.69 3.67
316 317 9.950496 GGGACAATGACTATAATATCATCAAGT 57.050 33.333 0.00 0.00 34.41 3.16
317 318 9.948964 TGGGACAATGACTATAATATCATCAAG 57.051 33.333 0.00 0.00 34.41 3.02
337 338 2.426842 TGTGACAATGTGTTGGGACA 57.573 45.000 0.00 0.00 39.70 4.02
338 339 5.219633 GTTAATGTGACAATGTGTTGGGAC 58.780 41.667 0.00 0.00 39.70 4.46
339 340 4.023622 CGTTAATGTGACAATGTGTTGGGA 60.024 41.667 0.00 0.00 39.70 4.37
340 341 4.225984 CGTTAATGTGACAATGTGTTGGG 58.774 43.478 0.00 0.00 39.70 4.12
341 342 4.854399 ACGTTAATGTGACAATGTGTTGG 58.146 39.130 0.00 0.00 39.70 3.77
342 343 5.331458 GCAACGTTAATGTGACAATGTGTTG 60.331 40.000 0.00 13.17 41.20 3.33
343 344 4.737765 GCAACGTTAATGTGACAATGTGTT 59.262 37.500 0.00 0.00 0.00 3.32
344 345 4.036262 AGCAACGTTAATGTGACAATGTGT 59.964 37.500 0.00 0.00 0.00 3.72
345 346 4.536065 AGCAACGTTAATGTGACAATGTG 58.464 39.130 0.00 0.00 0.00 3.21
346 347 4.829064 AGCAACGTTAATGTGACAATGT 57.171 36.364 0.00 0.00 0.00 2.71
347 348 7.616103 TTAAAGCAACGTTAATGTGACAATG 57.384 32.000 0.00 0.00 0.00 2.82
348 349 8.810652 AATTAAAGCAACGTTAATGTGACAAT 57.189 26.923 0.00 0.00 32.71 2.71
349 350 9.900710 ATAATTAAAGCAACGTTAATGTGACAA 57.099 25.926 0.00 0.00 32.71 3.18
350 351 9.335891 CATAATTAAAGCAACGTTAATGTGACA 57.664 29.630 0.00 0.00 32.71 3.58
351 352 9.337091 ACATAATTAAAGCAACGTTAATGTGAC 57.663 29.630 0.00 0.00 32.71 3.67
354 355 9.777575 GGTACATAATTAAAGCAACGTTAATGT 57.222 29.630 0.00 0.00 32.71 2.71
355 356 9.997482 AGGTACATAATTAAAGCAACGTTAATG 57.003 29.630 0.00 0.00 32.71 1.90
357 358 9.217278 TGAGGTACATAATTAAAGCAACGTTAA 57.783 29.630 0.00 0.00 0.00 2.01
358 359 8.774890 TGAGGTACATAATTAAAGCAACGTTA 57.225 30.769 0.00 0.00 0.00 3.18
359 360 7.625606 GCTGAGGTACATAATTAAAGCAACGTT 60.626 37.037 0.00 0.00 0.00 3.99
360 361 6.183360 GCTGAGGTACATAATTAAAGCAACGT 60.183 38.462 0.00 0.00 0.00 3.99
361 362 6.183360 TGCTGAGGTACATAATTAAAGCAACG 60.183 38.462 0.00 0.00 35.37 4.10
362 363 7.083875 TGCTGAGGTACATAATTAAAGCAAC 57.916 36.000 0.00 0.00 35.37 4.17
363 364 7.695480 TTGCTGAGGTACATAATTAAAGCAA 57.305 32.000 0.00 0.00 43.61 3.91
364 365 7.880160 ATTGCTGAGGTACATAATTAAAGCA 57.120 32.000 0.00 0.00 36.42 3.91
370 371 9.461312 TGAAGTTAATTGCTGAGGTACATAATT 57.539 29.630 0.00 0.00 33.27 1.40
371 372 9.632638 ATGAAGTTAATTGCTGAGGTACATAAT 57.367 29.630 0.00 0.00 0.00 1.28
372 373 9.109393 GATGAAGTTAATTGCTGAGGTACATAA 57.891 33.333 0.00 0.00 0.00 1.90
373 374 8.264347 TGATGAAGTTAATTGCTGAGGTACATA 58.736 33.333 0.00 0.00 0.00 2.29
374 375 7.112122 TGATGAAGTTAATTGCTGAGGTACAT 58.888 34.615 0.00 0.00 0.00 2.29
375 376 6.472016 TGATGAAGTTAATTGCTGAGGTACA 58.528 36.000 0.00 0.00 0.00 2.90
376 377 6.985188 TGATGAAGTTAATTGCTGAGGTAC 57.015 37.500 0.00 0.00 0.00 3.34
377 378 9.851686 ATTATGATGAAGTTAATTGCTGAGGTA 57.148 29.630 0.00 0.00 0.00 3.08
378 379 8.757982 ATTATGATGAAGTTAATTGCTGAGGT 57.242 30.769 0.00 0.00 0.00 3.85
419 420 8.763601 ACTGCTCAAGGTATACTTCTAAATTCT 58.236 33.333 2.25 0.00 37.29 2.40
420 421 8.950208 ACTGCTCAAGGTATACTTCTAAATTC 57.050 34.615 2.25 0.00 37.29 2.17
423 424 9.032624 ACTAACTGCTCAAGGTATACTTCTAAA 57.967 33.333 2.25 0.00 37.29 1.85
424 425 8.591114 ACTAACTGCTCAAGGTATACTTCTAA 57.409 34.615 2.25 0.00 37.29 2.10
425 426 8.467598 CAACTAACTGCTCAAGGTATACTTCTA 58.532 37.037 2.25 0.00 37.29 2.10
426 427 7.324178 CAACTAACTGCTCAAGGTATACTTCT 58.676 38.462 2.25 0.00 37.29 2.85
427 428 6.036191 GCAACTAACTGCTCAAGGTATACTTC 59.964 42.308 2.25 0.00 36.99 3.01
428 429 5.875359 GCAACTAACTGCTCAAGGTATACTT 59.125 40.000 2.25 0.00 38.50 2.24
429 430 5.420409 GCAACTAACTGCTCAAGGTATACT 58.580 41.667 2.25 0.00 39.34 2.12
430 431 5.720261 GCAACTAACTGCTCAAGGTATAC 57.280 43.478 0.00 0.00 39.34 1.47
467 468 8.921205 ACATACATTTTAAGACGGAGGTAGTAT 58.079 33.333 0.00 0.00 0.00 2.12
468 469 8.297470 ACATACATTTTAAGACGGAGGTAGTA 57.703 34.615 0.00 0.00 0.00 1.82
469 470 7.179076 ACATACATTTTAAGACGGAGGTAGT 57.821 36.000 0.00 0.00 0.00 2.73
470 471 9.245962 CTTACATACATTTTAAGACGGAGGTAG 57.754 37.037 0.00 0.00 0.00 3.18
471 472 8.970020 TCTTACATACATTTTAAGACGGAGGTA 58.030 33.333 0.00 0.00 28.89 3.08
472 473 7.763071 GTCTTACATACATTTTAAGACGGAGGT 59.237 37.037 5.28 0.00 40.93 3.85
473 474 8.128016 GTCTTACATACATTTTAAGACGGAGG 57.872 38.462 5.28 0.00 40.93 4.30
483 484 9.887406 CCTACAAAAACGTCTTACATACATTTT 57.113 29.630 0.00 0.00 0.00 1.82
484 485 8.019094 GCCTACAAAAACGTCTTACATACATTT 58.981 33.333 0.00 0.00 0.00 2.32
485 486 7.389607 AGCCTACAAAAACGTCTTACATACATT 59.610 33.333 0.00 0.00 0.00 2.71
486 487 6.877322 AGCCTACAAAAACGTCTTACATACAT 59.123 34.615 0.00 0.00 0.00 2.29
487 488 6.225318 AGCCTACAAAAACGTCTTACATACA 58.775 36.000 0.00 0.00 0.00 2.29
488 489 6.716898 AGCCTACAAAAACGTCTTACATAC 57.283 37.500 0.00 0.00 0.00 2.39
489 490 7.605449 ACTAGCCTACAAAAACGTCTTACATA 58.395 34.615 0.00 0.00 0.00 2.29
490 491 6.461640 ACTAGCCTACAAAAACGTCTTACAT 58.538 36.000 0.00 0.00 0.00 2.29
491 492 5.846203 ACTAGCCTACAAAAACGTCTTACA 58.154 37.500 0.00 0.00 0.00 2.41
492 493 6.309009 GGTACTAGCCTACAAAAACGTCTTAC 59.691 42.308 0.00 0.00 0.00 2.34
493 494 6.209391 AGGTACTAGCCTACAAAAACGTCTTA 59.791 38.462 0.00 0.00 36.02 2.10
494 495 5.011431 AGGTACTAGCCTACAAAAACGTCTT 59.989 40.000 0.00 0.00 36.02 3.01
495 496 4.525874 AGGTACTAGCCTACAAAAACGTCT 59.474 41.667 0.00 0.00 36.02 4.18
496 497 4.814147 AGGTACTAGCCTACAAAAACGTC 58.186 43.478 0.00 0.00 36.02 4.34
497 498 4.879197 AGGTACTAGCCTACAAAAACGT 57.121 40.909 0.00 0.00 36.02 3.99
498 499 6.158598 TGTAAGGTACTAGCCTACAAAAACG 58.841 40.000 0.00 0.00 38.49 3.60
499 500 7.442062 TGTTGTAAGGTACTAGCCTACAAAAAC 59.558 37.037 9.89 2.41 38.49 2.43
500 501 7.507829 TGTTGTAAGGTACTAGCCTACAAAAA 58.492 34.615 9.89 2.08 38.49 1.94
501 502 7.065120 TGTTGTAAGGTACTAGCCTACAAAA 57.935 36.000 9.89 4.07 38.49 2.44
502 503 6.669125 TGTTGTAAGGTACTAGCCTACAAA 57.331 37.500 9.89 1.66 38.49 2.83
503 504 6.862469 ATGTTGTAAGGTACTAGCCTACAA 57.138 37.500 5.66 5.66 38.49 2.41
504 505 7.121382 AGTATGTTGTAAGGTACTAGCCTACA 58.879 38.462 0.00 0.00 38.49 2.74
505 506 7.579761 AGTATGTTGTAAGGTACTAGCCTAC 57.420 40.000 0.00 0.00 38.49 3.18
506 507 8.599624 AAAGTATGTTGTAAGGTACTAGCCTA 57.400 34.615 0.00 0.00 38.49 3.93
507 508 7.492077 AAAGTATGTTGTAAGGTACTAGCCT 57.508 36.000 0.00 0.00 38.49 4.58
508 509 8.557592 AAAAAGTATGTTGTAAGGTACTAGCC 57.442 34.615 0.00 0.00 38.49 3.93
534 535 8.254508 ACTTACCAGTCAACTAAAATGCAAAAA 58.745 29.630 0.00 0.00 0.00 1.94
535 536 7.777095 ACTTACCAGTCAACTAAAATGCAAAA 58.223 30.769 0.00 0.00 0.00 2.44
536 537 7.341445 ACTTACCAGTCAACTAAAATGCAAA 57.659 32.000 0.00 0.00 0.00 3.68
537 538 6.952773 ACTTACCAGTCAACTAAAATGCAA 57.047 33.333 0.00 0.00 0.00 4.08
551 552 7.016153 TGACAATCCTATTTGACTTACCAGT 57.984 36.000 0.00 0.00 35.17 4.00
552 553 7.414540 GCTTGACAATCCTATTTGACTTACCAG 60.415 40.741 0.00 0.00 0.00 4.00
553 554 6.374333 GCTTGACAATCCTATTTGACTTACCA 59.626 38.462 0.00 0.00 0.00 3.25
554 555 6.183360 GGCTTGACAATCCTATTTGACTTACC 60.183 42.308 0.63 0.00 0.00 2.85
555 556 6.456988 CGGCTTGACAATCCTATTTGACTTAC 60.457 42.308 6.51 0.00 0.00 2.34
556 557 5.584649 CGGCTTGACAATCCTATTTGACTTA 59.415 40.000 6.51 0.00 0.00 2.24
557 558 4.396166 CGGCTTGACAATCCTATTTGACTT 59.604 41.667 6.51 0.00 0.00 3.01
558 559 3.941483 CGGCTTGACAATCCTATTTGACT 59.059 43.478 6.51 0.00 0.00 3.41
559 560 3.689649 ACGGCTTGACAATCCTATTTGAC 59.310 43.478 6.51 0.00 0.00 3.18
560 561 3.689161 CACGGCTTGACAATCCTATTTGA 59.311 43.478 6.51 0.00 0.00 2.69
561 562 3.440173 ACACGGCTTGACAATCCTATTTG 59.560 43.478 6.51 1.63 0.00 2.32
562 563 3.686016 ACACGGCTTGACAATCCTATTT 58.314 40.909 6.51 0.00 0.00 1.40
563 564 3.270877 GACACGGCTTGACAATCCTATT 58.729 45.455 6.51 0.00 0.00 1.73
564 565 2.420129 GGACACGGCTTGACAATCCTAT 60.420 50.000 6.51 0.00 0.00 2.57
565 566 1.066430 GGACACGGCTTGACAATCCTA 60.066 52.381 6.51 0.00 0.00 2.94
566 567 0.321653 GGACACGGCTTGACAATCCT 60.322 55.000 6.51 0.00 0.00 3.24
567 568 0.605319 TGGACACGGCTTGACAATCC 60.605 55.000 0.00 0.00 0.00 3.01
568 569 1.453155 ATGGACACGGCTTGACAATC 58.547 50.000 0.00 0.00 0.00 2.67
569 570 1.541147 CAATGGACACGGCTTGACAAT 59.459 47.619 0.00 0.00 0.00 2.71
570 571 0.950836 CAATGGACACGGCTTGACAA 59.049 50.000 0.00 0.00 0.00 3.18
571 572 0.179032 ACAATGGACACGGCTTGACA 60.179 50.000 0.00 0.00 0.00 3.58
572 573 0.517316 GACAATGGACACGGCTTGAC 59.483 55.000 0.00 0.00 0.00 3.18
573 574 0.107643 TGACAATGGACACGGCTTGA 59.892 50.000 0.00 0.00 0.00 3.02
574 575 0.950836 TTGACAATGGACACGGCTTG 59.049 50.000 0.00 0.00 0.00 4.01
575 576 0.951558 GTTGACAATGGACACGGCTT 59.048 50.000 0.00 0.00 0.00 4.35
576 577 0.179032 TGTTGACAATGGACACGGCT 60.179 50.000 0.00 0.00 0.00 5.52
577 578 0.665835 TTGTTGACAATGGACACGGC 59.334 50.000 0.00 0.00 0.00 5.68
578 579 1.001815 GGTTGTTGACAATGGACACGG 60.002 52.381 0.00 0.00 38.24 4.94
579 580 1.001815 GGGTTGTTGACAATGGACACG 60.002 52.381 0.00 0.00 38.24 4.49
580 581 2.028130 TGGGTTGTTGACAATGGACAC 58.972 47.619 0.00 0.00 38.24 3.67
581 582 2.443958 TGGGTTGTTGACAATGGACA 57.556 45.000 0.00 0.00 38.24 4.02
582 583 3.157087 AGATGGGTTGTTGACAATGGAC 58.843 45.455 0.00 0.00 38.24 4.02
583 584 3.524095 AGATGGGTTGTTGACAATGGA 57.476 42.857 0.00 0.00 38.24 3.41
584 585 4.078537 TGTAGATGGGTTGTTGACAATGG 58.921 43.478 0.00 0.00 38.24 3.16
585 586 5.703978 TTGTAGATGGGTTGTTGACAATG 57.296 39.130 0.00 0.00 38.24 2.82
586 587 6.916360 ATTTGTAGATGGGTTGTTGACAAT 57.084 33.333 0.00 0.00 38.24 2.71
587 588 6.773200 TGTATTTGTAGATGGGTTGTTGACAA 59.227 34.615 0.00 0.00 0.00 3.18
588 589 6.205853 GTGTATTTGTAGATGGGTTGTTGACA 59.794 38.462 0.00 0.00 0.00 3.58
589 590 6.349033 GGTGTATTTGTAGATGGGTTGTTGAC 60.349 42.308 0.00 0.00 0.00 3.18
590 591 5.708230 GGTGTATTTGTAGATGGGTTGTTGA 59.292 40.000 0.00 0.00 0.00 3.18
591 592 5.710099 AGGTGTATTTGTAGATGGGTTGTTG 59.290 40.000 0.00 0.00 0.00 3.33
592 593 5.887754 AGGTGTATTTGTAGATGGGTTGTT 58.112 37.500 0.00 0.00 0.00 2.83
593 594 5.514500 AGGTGTATTTGTAGATGGGTTGT 57.486 39.130 0.00 0.00 0.00 3.32
594 595 5.393027 GCAAGGTGTATTTGTAGATGGGTTG 60.393 44.000 0.00 0.00 0.00 3.77
595 596 4.705023 GCAAGGTGTATTTGTAGATGGGTT 59.295 41.667 0.00 0.00 0.00 4.11
596 597 4.263727 TGCAAGGTGTATTTGTAGATGGGT 60.264 41.667 0.00 0.00 0.00 4.51
597 598 4.269183 TGCAAGGTGTATTTGTAGATGGG 58.731 43.478 0.00 0.00 0.00 4.00
598 599 5.589855 TCATGCAAGGTGTATTTGTAGATGG 59.410 40.000 0.00 0.00 0.00 3.51
599 600 6.682423 TCATGCAAGGTGTATTTGTAGATG 57.318 37.500 0.00 0.00 0.00 2.90
600 601 7.709947 CATTCATGCAAGGTGTATTTGTAGAT 58.290 34.615 0.00 0.00 0.00 1.98
601 602 7.087409 CATTCATGCAAGGTGTATTTGTAGA 57.913 36.000 0.00 0.00 0.00 2.59
618 619 4.066769 GCTGTGTGCGCATTCATG 57.933 55.556 15.91 10.78 0.00 3.07
626 627 3.807223 GACCATAGTCAAGCTGTGTGCG 61.807 54.545 0.00 0.00 44.06 5.34
627 628 1.734465 GACCATAGTCAAGCTGTGTGC 59.266 52.381 0.00 0.00 42.99 4.57
628 629 2.289631 TGGACCATAGTCAAGCTGTGTG 60.290 50.000 0.00 0.00 45.48 3.82
629 630 1.977854 TGGACCATAGTCAAGCTGTGT 59.022 47.619 0.00 0.00 45.48 3.72
630 631 2.768253 TGGACCATAGTCAAGCTGTG 57.232 50.000 0.00 0.00 45.48 3.66
631 632 4.680708 CGTATTGGACCATAGTCAAGCTGT 60.681 45.833 0.00 0.00 45.48 4.40
632 633 3.804325 CGTATTGGACCATAGTCAAGCTG 59.196 47.826 0.00 0.00 45.48 4.24
640 641 7.831753 AGATACTTGATCGTATTGGACCATAG 58.168 38.462 0.00 0.00 39.80 2.23
658 659 6.710597 TTAACTCGCCAGTGATAGATACTT 57.289 37.500 0.00 0.00 31.06 2.24
659 660 6.710597 TTTAACTCGCCAGTGATAGATACT 57.289 37.500 0.00 0.00 31.06 2.12
660 661 7.766219 TTTTTAACTCGCCAGTGATAGATAC 57.234 36.000 0.00 0.00 31.06 2.24
714 715 5.587844 CAGCTGCCAGTGATAGATACTTTTT 59.412 40.000 0.00 0.00 0.00 1.94
715 716 5.121811 CAGCTGCCAGTGATAGATACTTTT 58.878 41.667 0.00 0.00 0.00 2.27
716 717 4.444022 CCAGCTGCCAGTGATAGATACTTT 60.444 45.833 8.66 0.00 0.00 2.66
784 785 0.904865 AGGATCCAGCCGACTTGTCA 60.905 55.000 15.82 0.00 0.00 3.58
787 788 4.844420 GAGGATCCAGCCGACTTG 57.156 61.111 15.82 0.00 0.00 3.16
799 800 2.158900 CGTGTAGCAATTGGAGGAGGAT 60.159 50.000 7.72 0.00 0.00 3.24
937 939 2.045926 ACAGGTGGGCGCTGATTC 60.046 61.111 7.64 0.00 0.00 2.52
986 988 2.513666 GCGATGGATTGGACGGCA 60.514 61.111 0.00 0.00 0.00 5.69
990 992 0.179000 ACAGAGGCGATGGATTGGAC 59.821 55.000 0.00 0.00 0.00 4.02
1066 1071 4.969196 ATGGATGCTACGGCGGCG 62.969 66.667 31.06 31.06 42.25 6.46
1074 1079 0.106569 CTTGGGTGCCATGGATGCTA 60.107 55.000 18.40 0.00 31.53 3.49
1111 1116 3.319198 GCGGGGGTCTTCTCCACA 61.319 66.667 0.00 0.00 31.44 4.17
1216 1221 5.660629 AGATGTAGATCTTGTACGTCTCG 57.339 43.478 11.52 0.00 41.07 4.04
1345 1350 3.318384 TACCTGGCGAGCTTGGCA 61.318 61.111 27.16 27.16 42.76 4.92
1357 1362 1.880027 GTGGGCTTCTTGTTGTACCTG 59.120 52.381 0.00 0.00 0.00 4.00
1528 1533 6.019156 GCTAGCTACAGAATTCATCAGACAAC 60.019 42.308 7.70 0.00 0.00 3.32
1577 1582 1.202927 AGGCAGCACCATTGTTACAGT 60.203 47.619 0.00 0.00 43.14 3.55
1664 1704 2.646798 AGAAACCATCTTCCCAGCTCTT 59.353 45.455 0.00 0.00 33.39 2.85
1684 1725 7.194607 TCTGTGCAAAACTTTCAGAGATAAG 57.805 36.000 0.00 0.00 32.49 1.73
1685 1726 7.587629 CATCTGTGCAAAACTTTCAGAGATAA 58.412 34.615 6.99 0.00 38.33 1.75
1686 1727 7.137490 CATCTGTGCAAAACTTTCAGAGATA 57.863 36.000 6.99 0.00 38.33 1.98
1753 1794 1.699634 AGCTTTGCTACCTGAGTGGAA 59.300 47.619 0.00 0.00 36.99 3.53
1761 1802 6.648879 TTTCAAATACAAGCTTTGCTACCT 57.351 33.333 0.00 0.00 38.25 3.08
1767 1808 7.955324 CAGCATCAATTTCAAATACAAGCTTTG 59.045 33.333 0.00 0.00 35.41 2.77
1780 1935 7.123098 AGTGGTCAATTATCAGCATCAATTTCA 59.877 33.333 0.00 0.00 0.00 2.69
1834 1989 8.429237 TTTCAAAGAAAAATTGCTAGGGGATA 57.571 30.769 0.00 0.00 0.00 2.59
1838 1993 9.054922 TGAAATTTCAAAGAAAAATTGCTAGGG 57.945 29.630 18.45 0.00 36.65 3.53
1841 1996 8.547069 CCGTGAAATTTCAAAGAAAAATTGCTA 58.453 29.630 22.07 0.00 39.21 3.49
1842 1997 7.408910 CCGTGAAATTTCAAAGAAAAATTGCT 58.591 30.769 22.07 0.00 39.21 3.91
1879 2034 3.773560 TGATAAAAAGTTCAGGTGGGGG 58.226 45.455 0.00 0.00 0.00 5.40
1891 2047 9.341899 CTTTCGTCCCTTGTTAATGATAAAAAG 57.658 33.333 0.00 0.00 36.49 2.27
1907 2063 3.201266 TGTTAATATGGGCTTTCGTCCCT 59.799 43.478 0.00 0.00 44.23 4.20
1977 3046 1.234821 CTGAAACGTTGGCTGCCTAA 58.765 50.000 21.03 9.71 0.00 2.69
2007 3076 1.795170 TTTGCGGAAACAGCAGGCTC 61.795 55.000 0.00 0.00 46.01 4.70
2037 3106 9.699410 ATTATCTGAAACAAATGGGTTATCTGA 57.301 29.630 0.00 0.00 0.00 3.27
2071 3140 0.886563 ATCACTGCTGCAAAGGCTTC 59.113 50.000 3.02 0.00 41.91 3.86
2077 3146 3.555377 CCCAATCAAATCACTGCTGCAAA 60.555 43.478 3.02 0.00 0.00 3.68
2105 3174 7.222000 TCAAACAAATGGGTTATCTGGTTAC 57.778 36.000 0.00 0.00 0.00 2.50
2117 3186 2.095466 ACGTGCGTATCAAACAAATGGG 60.095 45.455 0.00 0.00 0.00 4.00
2143 8972 7.453126 AGGTACCCAATCAAATCAAATGTGTAA 59.547 33.333 8.74 0.00 0.00 2.41
2244 9096 2.922740 TCGAGGCTTAGTTTGTGGTT 57.077 45.000 0.00 0.00 0.00 3.67
2265 9117 4.775253 TGGGATAAAAATTCTCACCCAACC 59.225 41.667 0.00 0.00 42.11 3.77
2369 9228 2.923643 TCTATTTGTTTTCAACCGCGC 58.076 42.857 0.00 0.00 39.73 6.86
2370 9229 7.555639 TTTATTCTATTTGTTTTCAACCGCG 57.444 32.000 0.00 0.00 39.73 6.46
2412 9703 5.192176 AGCCATTCTTTCCTCTGATTCTTC 58.808 41.667 0.00 0.00 0.00 2.87
2420 9722 5.029807 GCTTAGTAGCCATTCTTTCCTCT 57.970 43.478 0.00 0.00 41.74 3.69
2451 9753 6.962678 TCGACTTAGTTTGTGTTAAGTTTTGC 59.037 34.615 0.00 0.00 39.52 3.68
2455 9757 8.428186 TTGATCGACTTAGTTTGTGTTAAGTT 57.572 30.769 0.00 0.00 39.52 2.66
2464 9766 5.419542 TCCCTCATTGATCGACTTAGTTTG 58.580 41.667 0.00 0.00 0.00 2.93
2505 9808 4.078537 CCTGACCCACACATCATTGTAAA 58.921 43.478 0.00 0.00 33.76 2.01
2506 9809 3.684908 CCTGACCCACACATCATTGTAA 58.315 45.455 0.00 0.00 33.76 2.41
2507 9810 2.617788 GCCTGACCCACACATCATTGTA 60.618 50.000 0.00 0.00 33.76 2.41
2509 9812 0.813184 GCCTGACCCACACATCATTG 59.187 55.000 0.00 0.00 0.00 2.82
2510 9813 0.323725 GGCCTGACCCACACATCATT 60.324 55.000 0.00 0.00 0.00 2.57
2513 9816 2.756400 TGGCCTGACCCACACATC 59.244 61.111 3.32 0.00 37.83 3.06
2524 9827 1.347707 TCTCTTAGTTGTGGTGGCCTG 59.652 52.381 3.32 0.00 0.00 4.85
2532 9835 8.725148 ACTGAAGCATAATTTCTCTTAGTTGTG 58.275 33.333 0.00 0.00 0.00 3.33
2534 9837 9.160496 AGACTGAAGCATAATTTCTCTTAGTTG 57.840 33.333 0.00 0.00 0.00 3.16
2549 9852 3.195610 TGTGACGGAATAGACTGAAGCAT 59.804 43.478 0.00 0.00 0.00 3.79
2553 9856 3.571571 CGTTGTGACGGAATAGACTGAA 58.428 45.455 0.00 0.00 45.32 3.02
2593 9896 0.447801 ATGCTCCGTTTTGCGCTTAG 59.552 50.000 9.73 0.00 39.71 2.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.