Multiple sequence alignment - TraesCS6B01G114100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G114100 chr6B 100.000 2936 0 0 1 2936 96562649 96559714 0.000000e+00 5422.0
1 TraesCS6B01G114100 chr6D 91.485 1010 41 14 835 1830 41252938 41253916 0.000000e+00 1347.0
2 TraesCS6B01G114100 chr6D 88.095 420 34 9 1823 2235 41254068 41254478 4.400000e-133 484.0
3 TraesCS6B01G114100 chr6D 88.427 337 37 2 2591 2926 41255240 41255575 3.520000e-109 405.0
4 TraesCS6B01G114100 chr6D 88.529 340 24 9 463 792 41252604 41252938 5.900000e-107 398.0
5 TraesCS6B01G114100 chr6D 100.000 31 0 0 2239 2269 41254775 41254805 1.140000e-04 58.4
6 TraesCS6B01G114100 chr6A 88.493 843 55 21 1435 2268 51902420 51903229 0.000000e+00 981.0
7 TraesCS6B01G114100 chr6A 87.136 894 37 25 578 1441 51901169 51902014 0.000000e+00 942.0
8 TraesCS6B01G114100 chr5B 76.654 257 52 6 144 397 387745894 387745643 5.100000e-28 135.0
9 TraesCS6B01G114100 chr4B 84.034 119 15 4 2591 2706 438416814 438416697 8.600000e-21 111.0
10 TraesCS6B01G114100 chr3B 82.946 129 16 6 2591 2715 66674122 66674248 8.600000e-21 111.0
11 TraesCS6B01G114100 chr5D 84.034 119 13 5 2591 2705 324702544 324702660 3.090000e-20 110.0
12 TraesCS6B01G114100 chr5D 82.031 128 15 7 2590 2715 473103209 473103088 5.180000e-18 102.0
13 TraesCS6B01G114100 chr4D 85.185 108 14 2 2608 2715 132921302 132921407 3.090000e-20 110.0
14 TraesCS6B01G114100 chr2A 84.906 106 14 2 2608 2713 771796458 771796355 4.000000e-19 106.0
15 TraesCS6B01G114100 chr5A 83.186 113 15 4 2591 2700 568561999 568562110 1.860000e-17 100.0
16 TraesCS6B01G114100 chr2B 83.186 113 16 3 2591 2700 6301974 6302086 1.860000e-17 100.0
17 TraesCS6B01G114100 chr3D 96.970 33 1 0 1222 1254 184138800 184138832 4.090000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G114100 chr6B 96559714 96562649 2935 True 5422.00 5422 100.0000 1 2936 1 chr6B.!!$R1 2935
1 TraesCS6B01G114100 chr6D 41252604 41255575 2971 False 538.48 1347 91.3072 463 2926 5 chr6D.!!$F1 2463
2 TraesCS6B01G114100 chr6A 51901169 51903229 2060 False 961.50 981 87.8145 578 2268 2 chr6A.!!$F1 1690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
396 397 0.033781 AACATGCACCGCAAAATGCT 59.966 45.0 0.00 0.00 43.62 3.79 F
397 398 0.033781 ACATGCACCGCAAAATGCTT 59.966 45.0 0.00 0.00 43.62 3.91 F
415 416 0.109532 TTCGACCATTGGCCAACAGA 59.890 50.0 23.27 12.81 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1667 2128 0.033504 GTCTTCAGGAACGCTGTCCA 59.966 55.0 5.43 0.0 40.48 4.02 R
1753 2214 0.108377 CCGGCCTATATATGCACGCA 60.108 55.0 11.48 0.0 0.00 5.24 R
2020 2646 0.518636 CCACACGAAAGACATGCCAG 59.481 55.0 0.00 0.0 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 3.773630 CGCGTGCTACCGGTGTTG 61.774 66.667 19.93 8.59 0.00 3.33
39 40 3.419759 GCGTGCTACCGGTGTTGG 61.420 66.667 19.93 5.83 0.00 3.77
40 41 2.340809 CGTGCTACCGGTGTTGGA 59.659 61.111 19.93 5.71 0.00 3.53
41 42 1.301087 CGTGCTACCGGTGTTGGAA 60.301 57.895 19.93 0.00 0.00 3.53
42 43 1.289109 CGTGCTACCGGTGTTGGAAG 61.289 60.000 19.93 6.37 0.00 3.46
43 44 0.250166 GTGCTACCGGTGTTGGAAGT 60.250 55.000 19.93 0.00 0.00 3.01
44 45 0.250124 TGCTACCGGTGTTGGAAGTG 60.250 55.000 19.93 0.00 0.00 3.16
45 46 0.953960 GCTACCGGTGTTGGAAGTGG 60.954 60.000 19.93 0.00 0.00 4.00
46 47 0.953960 CTACCGGTGTTGGAAGTGGC 60.954 60.000 19.93 0.00 0.00 5.01
47 48 2.400269 TACCGGTGTTGGAAGTGGCC 62.400 60.000 19.93 0.00 0.00 5.36
48 49 2.203280 CGGTGTTGGAAGTGGCCA 60.203 61.111 0.00 0.00 35.78 5.36
49 50 1.826054 CGGTGTTGGAAGTGGCCAA 60.826 57.895 7.24 0.00 45.28 4.52
55 56 0.404040 TTGGAAGTGGCCAACTAGGG 59.596 55.000 7.24 0.00 42.75 3.53
56 57 0.770557 TGGAAGTGGCCAACTAGGGT 60.771 55.000 7.24 0.00 38.56 4.34
57 58 0.322546 GGAAGTGGCCAACTAGGGTG 60.323 60.000 7.24 0.00 38.56 4.61
58 59 0.400594 GAAGTGGCCAACTAGGGTGT 59.599 55.000 7.24 0.00 38.56 4.16
59 60 0.850784 AAGTGGCCAACTAGGGTGTT 59.149 50.000 7.24 0.00 38.56 3.32
60 61 0.110486 AGTGGCCAACTAGGGTGTTG 59.890 55.000 7.24 0.00 44.81 3.33
66 67 1.519408 CAACTAGGGTGTTGGAACCG 58.481 55.000 0.00 0.00 42.39 4.44
67 68 0.399075 AACTAGGGTGTTGGAACCGG 59.601 55.000 0.00 0.00 41.52 5.28
68 69 1.376812 CTAGGGTGTTGGAACCGGC 60.377 63.158 0.00 0.00 41.52 6.13
69 70 1.838073 CTAGGGTGTTGGAACCGGCT 61.838 60.000 0.00 0.00 41.52 5.52
70 71 0.544833 TAGGGTGTTGGAACCGGCTA 60.545 55.000 0.00 0.00 41.52 3.93
71 72 1.673337 GGGTGTTGGAACCGGCTAC 60.673 63.158 0.00 0.00 41.52 3.58
72 73 2.030958 GGTGTTGGAACCGGCTACG 61.031 63.158 0.00 0.00 40.55 3.51
73 74 1.005867 GTGTTGGAACCGGCTACGA 60.006 57.895 0.00 0.00 44.60 3.43
74 75 1.005867 TGTTGGAACCGGCTACGAC 60.006 57.895 0.00 0.00 44.60 4.34
75 76 1.005867 GTTGGAACCGGCTACGACA 60.006 57.895 0.00 0.00 44.60 4.35
76 77 0.600782 GTTGGAACCGGCTACGACAA 60.601 55.000 0.00 0.00 44.60 3.18
77 78 0.106335 TTGGAACCGGCTACGACAAA 59.894 50.000 0.00 0.00 44.60 2.83
78 79 0.322322 TGGAACCGGCTACGACAAAT 59.678 50.000 0.00 0.00 44.60 2.32
79 80 0.725117 GGAACCGGCTACGACAAATG 59.275 55.000 0.00 0.00 44.60 2.32
80 81 0.096454 GAACCGGCTACGACAAATGC 59.904 55.000 0.00 0.00 44.60 3.56
81 82 0.321298 AACCGGCTACGACAAATGCT 60.321 50.000 0.00 0.00 44.60 3.79
82 83 0.321298 ACCGGCTACGACAAATGCTT 60.321 50.000 0.00 0.00 44.60 3.91
83 84 0.096976 CCGGCTACGACAAATGCTTG 59.903 55.000 0.00 0.00 44.60 4.01
84 85 1.075542 CGGCTACGACAAATGCTTGA 58.924 50.000 0.00 0.00 44.60 3.02
85 86 1.463056 CGGCTACGACAAATGCTTGAA 59.537 47.619 0.00 0.00 44.60 2.69
86 87 2.724839 CGGCTACGACAAATGCTTGAAC 60.725 50.000 0.00 0.00 44.60 3.18
87 88 2.414161 GGCTACGACAAATGCTTGAACC 60.414 50.000 0.00 0.00 36.33 3.62
88 89 2.225491 GCTACGACAAATGCTTGAACCA 59.775 45.455 0.00 0.00 36.33 3.67
89 90 3.119849 GCTACGACAAATGCTTGAACCAT 60.120 43.478 0.00 0.00 36.33 3.55
90 91 3.287312 ACGACAAATGCTTGAACCATG 57.713 42.857 0.00 0.00 36.33 3.66
91 92 1.987770 CGACAAATGCTTGAACCATGC 59.012 47.619 0.00 0.00 36.33 4.06
92 93 1.987770 GACAAATGCTTGAACCATGCG 59.012 47.619 0.00 0.00 37.34 4.73
93 94 0.717224 CAAATGCTTGAACCATGCGC 59.283 50.000 0.00 0.00 37.34 6.09
94 95 0.604578 AAATGCTTGAACCATGCGCT 59.395 45.000 9.73 0.00 37.34 5.92
95 96 0.108992 AATGCTTGAACCATGCGCTG 60.109 50.000 9.73 4.25 37.34 5.18
96 97 2.505557 GCTTGAACCATGCGCTGC 60.506 61.111 9.73 0.00 0.00 5.25
97 98 2.956194 CTTGAACCATGCGCTGCA 59.044 55.556 9.73 5.73 44.86 4.41
98 99 1.286570 CTTGAACCATGCGCTGCAA 59.713 52.632 9.73 0.00 43.62 4.08
99 100 1.005294 CTTGAACCATGCGCTGCAAC 61.005 55.000 9.73 0.00 43.62 4.17
100 101 1.454572 TTGAACCATGCGCTGCAACT 61.455 50.000 9.73 0.00 43.62 3.16
101 102 0.605050 TGAACCATGCGCTGCAACTA 60.605 50.000 9.73 0.00 43.62 2.24
102 103 0.179189 GAACCATGCGCTGCAACTAC 60.179 55.000 9.73 0.00 43.62 2.73
103 104 0.888736 AACCATGCGCTGCAACTACA 60.889 50.000 9.73 0.00 43.62 2.74
104 105 1.300971 ACCATGCGCTGCAACTACAG 61.301 55.000 9.73 0.00 43.62 2.74
105 106 1.426621 CATGCGCTGCAACTACAGG 59.573 57.895 9.73 0.00 43.62 4.00
106 107 2.401766 ATGCGCTGCAACTACAGGC 61.402 57.895 9.73 0.00 43.62 4.85
107 108 3.049674 GCGCTGCAACTACAGGCA 61.050 61.111 0.00 0.00 38.16 4.75
108 109 2.863153 CGCTGCAACTACAGGCAC 59.137 61.111 0.00 0.00 38.16 5.01
109 110 2.680913 CGCTGCAACTACAGGCACC 61.681 63.158 0.00 0.00 38.16 5.01
110 111 2.680913 GCTGCAACTACAGGCACCG 61.681 63.158 0.00 0.00 38.16 4.94
111 112 1.301716 CTGCAACTACAGGCACCGT 60.302 57.895 0.00 0.00 35.86 4.83
112 113 0.037697 CTGCAACTACAGGCACCGTA 60.038 55.000 0.00 0.00 35.86 4.02
113 114 0.611200 TGCAACTACAGGCACCGTAT 59.389 50.000 0.00 0.00 34.58 3.06
114 115 1.287425 GCAACTACAGGCACCGTATC 58.713 55.000 0.00 0.00 0.00 2.24
115 116 1.935933 CAACTACAGGCACCGTATCC 58.064 55.000 0.00 0.00 0.00 2.59
116 117 1.206132 CAACTACAGGCACCGTATCCA 59.794 52.381 0.00 0.00 0.00 3.41
117 118 1.112113 ACTACAGGCACCGTATCCAG 58.888 55.000 0.00 0.00 0.00 3.86
118 119 0.389391 CTACAGGCACCGTATCCAGG 59.611 60.000 0.00 0.00 0.00 4.45
119 120 0.324923 TACAGGCACCGTATCCAGGT 60.325 55.000 0.00 0.00 43.97 4.00
126 127 2.762535 ACCGTATCCAGGTGAAGTTG 57.237 50.000 0.00 0.00 41.10 3.16
127 128 1.338769 ACCGTATCCAGGTGAAGTTGC 60.339 52.381 0.00 0.00 41.10 4.17
128 129 0.999406 CGTATCCAGGTGAAGTTGCG 59.001 55.000 0.00 0.00 0.00 4.85
129 130 1.403647 CGTATCCAGGTGAAGTTGCGA 60.404 52.381 0.00 0.00 0.00 5.10
130 131 2.271800 GTATCCAGGTGAAGTTGCGAG 58.728 52.381 0.00 0.00 0.00 5.03
131 132 0.036010 ATCCAGGTGAAGTTGCGAGG 60.036 55.000 0.00 0.00 0.00 4.63
132 133 1.672356 CCAGGTGAAGTTGCGAGGG 60.672 63.158 0.00 0.00 0.00 4.30
133 134 1.672356 CAGGTGAAGTTGCGAGGGG 60.672 63.158 0.00 0.00 0.00 4.79
134 135 2.147387 AGGTGAAGTTGCGAGGGGT 61.147 57.895 0.00 0.00 0.00 4.95
135 136 1.671379 GGTGAAGTTGCGAGGGGTC 60.671 63.158 0.00 0.00 0.00 4.46
136 137 2.027625 GTGAAGTTGCGAGGGGTCG 61.028 63.158 0.00 0.00 0.00 4.79
137 138 2.204461 TGAAGTTGCGAGGGGTCGA 61.204 57.895 0.00 0.00 34.64 4.20
138 139 1.446272 GAAGTTGCGAGGGGTCGAG 60.446 63.158 0.00 0.00 34.64 4.04
139 140 2.837371 GAAGTTGCGAGGGGTCGAGG 62.837 65.000 0.00 0.00 34.64 4.63
140 141 3.692406 GTTGCGAGGGGTCGAGGT 61.692 66.667 0.00 0.00 34.64 3.85
141 142 3.691342 TTGCGAGGGGTCGAGGTG 61.691 66.667 0.00 0.00 34.64 4.00
144 145 4.135153 CGAGGGGTCGAGGTGCTG 62.135 72.222 0.00 0.00 34.64 4.41
145 146 4.459089 GAGGGGTCGAGGTGCTGC 62.459 72.222 0.00 0.00 0.00 5.25
167 168 1.992170 CGGATGCTATAACCGGCTAC 58.008 55.000 0.00 0.00 42.48 3.58
168 169 1.731424 CGGATGCTATAACCGGCTACG 60.731 57.143 0.00 0.00 42.48 3.51
179 180 1.568514 CGGCTACGGTAGAGCTACG 59.431 63.158 19.02 9.98 39.98 3.51
180 181 0.877649 CGGCTACGGTAGAGCTACGA 60.878 60.000 19.02 0.00 39.98 3.43
181 182 0.585838 GGCTACGGTAGAGCTACGAC 59.414 60.000 19.02 0.00 39.98 4.34
182 183 0.585838 GCTACGGTAGAGCTACGACC 59.414 60.000 19.02 4.20 40.18 4.79
185 186 2.720605 GGTAGAGCTACGACCGGC 59.279 66.667 0.00 0.00 36.94 6.13
186 187 2.117156 GGTAGAGCTACGACCGGCA 61.117 63.158 0.00 0.00 36.94 5.69
187 188 1.063811 GTAGAGCTACGACCGGCAC 59.936 63.158 0.00 0.00 0.00 5.01
188 189 1.377594 TAGAGCTACGACCGGCACA 60.378 57.895 0.00 0.00 0.00 4.57
189 190 0.961857 TAGAGCTACGACCGGCACAA 60.962 55.000 0.00 0.00 0.00 3.33
190 191 1.805945 GAGCTACGACCGGCACAAG 60.806 63.158 0.00 0.00 0.00 3.16
191 192 2.209064 GAGCTACGACCGGCACAAGA 62.209 60.000 0.00 0.00 0.00 3.02
192 193 1.153628 GCTACGACCGGCACAAGAT 60.154 57.895 0.00 0.00 0.00 2.40
193 194 1.421410 GCTACGACCGGCACAAGATG 61.421 60.000 0.00 0.00 0.00 2.90
194 195 0.806102 CTACGACCGGCACAAGATGG 60.806 60.000 0.00 0.00 0.00 3.51
195 196 1.252215 TACGACCGGCACAAGATGGA 61.252 55.000 0.00 0.00 0.00 3.41
196 197 1.811266 CGACCGGCACAAGATGGAG 60.811 63.158 0.00 0.00 0.00 3.86
197 198 2.045926 ACCGGCACAAGATGGAGC 60.046 61.111 0.00 0.00 0.00 4.70
198 199 2.270205 CCGGCACAAGATGGAGCT 59.730 61.111 0.00 0.00 0.00 4.09
199 200 2.110967 CCGGCACAAGATGGAGCTG 61.111 63.158 0.00 0.00 0.00 4.24
200 201 2.758089 CGGCACAAGATGGAGCTGC 61.758 63.158 0.00 0.00 0.00 5.25
201 202 1.676635 GGCACAAGATGGAGCTGCA 60.677 57.895 11.44 11.44 0.00 4.41
202 203 1.246056 GGCACAAGATGGAGCTGCAA 61.246 55.000 13.45 0.00 0.00 4.08
203 204 0.109412 GCACAAGATGGAGCTGCAAC 60.109 55.000 13.45 10.19 0.00 4.17
204 205 0.524862 CACAAGATGGAGCTGCAACC 59.475 55.000 13.45 7.47 0.00 3.77
205 206 0.111061 ACAAGATGGAGCTGCAACCA 59.889 50.000 13.45 17.82 40.57 3.67
206 207 0.809385 CAAGATGGAGCTGCAACCAG 59.191 55.000 13.45 0.86 39.62 4.00
207 208 0.403271 AAGATGGAGCTGCAACCAGT 59.597 50.000 13.45 0.00 41.26 4.00
208 209 0.322277 AGATGGAGCTGCAACCAGTG 60.322 55.000 13.45 0.00 41.26 3.66
209 210 0.607489 GATGGAGCTGCAACCAGTGT 60.607 55.000 13.45 0.00 41.26 3.55
210 211 0.892358 ATGGAGCTGCAACCAGTGTG 60.892 55.000 13.45 0.00 41.26 3.82
211 212 2.641559 GAGCTGCAACCAGTGTGC 59.358 61.111 1.02 0.00 41.26 4.57
212 213 2.908940 AGCTGCAACCAGTGTGCC 60.909 61.111 1.02 0.00 41.26 5.01
213 214 3.218470 GCTGCAACCAGTGTGCCA 61.218 61.111 3.50 0.00 41.26 4.92
214 215 2.784356 GCTGCAACCAGTGTGCCAA 61.784 57.895 3.50 0.00 41.26 4.52
215 216 2.043625 CTGCAACCAGTGTGCCAAT 58.956 52.632 3.50 0.00 34.31 3.16
216 217 0.390124 CTGCAACCAGTGTGCCAATT 59.610 50.000 3.50 0.00 34.31 2.32
217 218 0.104487 TGCAACCAGTGTGCCAATTG 59.896 50.000 0.00 0.00 0.00 2.32
218 219 1.223417 GCAACCAGTGTGCCAATTGC 61.223 55.000 0.00 0.00 41.77 3.56
219 220 0.390124 CAACCAGTGTGCCAATTGCT 59.610 50.000 0.00 0.00 42.00 3.91
220 221 1.612950 CAACCAGTGTGCCAATTGCTA 59.387 47.619 0.00 0.00 42.00 3.49
221 222 1.247567 ACCAGTGTGCCAATTGCTAC 58.752 50.000 0.00 1.69 42.00 3.58
222 223 0.168788 CCAGTGTGCCAATTGCTACG 59.831 55.000 0.00 0.00 42.00 3.51
223 224 0.168788 CAGTGTGCCAATTGCTACGG 59.831 55.000 0.00 0.00 42.00 4.02
224 225 1.154035 GTGTGCCAATTGCTACGGC 60.154 57.895 0.00 0.00 46.43 5.68
225 226 2.339556 TGTGCCAATTGCTACGGCC 61.340 57.895 0.00 0.00 45.63 6.13
226 227 2.034843 TGCCAATTGCTACGGCCA 59.965 55.556 2.24 0.00 45.63 5.36
227 228 1.604879 TGCCAATTGCTACGGCCAA 60.605 52.632 2.24 0.00 45.63 4.52
228 229 1.153842 GCCAATTGCTACGGCCAAC 60.154 57.895 2.24 0.00 40.07 3.77
229 230 2.865669 GCCAATTGCTACGGCCAACG 62.866 60.000 2.24 0.00 42.65 4.10
256 257 3.611766 TTTTTGCCGGAACCAAAGAAA 57.388 38.095 5.05 0.00 34.10 2.52
257 258 2.880963 TTTGCCGGAACCAAAGAAAG 57.119 45.000 5.05 0.00 0.00 2.62
258 259 0.387565 TTGCCGGAACCAAAGAAAGC 59.612 50.000 5.05 0.00 0.00 3.51
259 260 0.753479 TGCCGGAACCAAAGAAAGCA 60.753 50.000 5.05 0.00 0.00 3.91
260 261 0.039165 GCCGGAACCAAAGAAAGCAG 60.039 55.000 5.05 0.00 0.00 4.24
261 262 0.598065 CCGGAACCAAAGAAAGCAGG 59.402 55.000 0.00 0.00 0.00 4.85
262 263 0.598065 CGGAACCAAAGAAAGCAGGG 59.402 55.000 0.00 0.00 0.00 4.45
263 264 1.704641 GGAACCAAAGAAAGCAGGGT 58.295 50.000 0.00 0.00 0.00 4.34
264 265 2.039418 GGAACCAAAGAAAGCAGGGTT 58.961 47.619 0.00 0.00 44.10 4.11
265 266 2.434336 GGAACCAAAGAAAGCAGGGTTT 59.566 45.455 0.00 0.00 41.65 3.27
266 267 3.457234 GAACCAAAGAAAGCAGGGTTTG 58.543 45.455 0.61 0.00 41.65 2.93
274 275 4.179579 GCAGGGTTTGCGATCGGC 62.180 66.667 18.30 9.85 44.09 5.54
291 292 2.357881 CGCAGAGCTGAGGTGCAA 60.358 61.111 0.85 0.00 37.01 4.08
292 293 2.675056 CGCAGAGCTGAGGTGCAAC 61.675 63.158 0.00 0.00 37.01 4.17
305 306 3.215245 GCAACCAGCAACACCCAA 58.785 55.556 0.00 0.00 44.79 4.12
306 307 1.747774 GCAACCAGCAACACCCAAT 59.252 52.632 0.00 0.00 44.79 3.16
307 308 0.600782 GCAACCAGCAACACCCAATG 60.601 55.000 0.00 0.00 44.79 2.82
308 309 0.600782 CAACCAGCAACACCCAATGC 60.601 55.000 0.00 0.00 42.87 3.56
314 315 2.566952 GCAACACCCAATGCTATGAC 57.433 50.000 0.00 0.00 39.46 3.06
315 316 1.134946 GCAACACCCAATGCTATGACC 59.865 52.381 0.00 0.00 39.46 4.02
316 317 2.445427 CAACACCCAATGCTATGACCA 58.555 47.619 0.00 0.00 0.00 4.02
317 318 2.128771 ACACCCAATGCTATGACCAC 57.871 50.000 0.00 0.00 0.00 4.16
318 319 1.340991 ACACCCAATGCTATGACCACC 60.341 52.381 0.00 0.00 0.00 4.61
319 320 0.998928 ACCCAATGCTATGACCACCA 59.001 50.000 0.00 0.00 0.00 4.17
320 321 1.340991 ACCCAATGCTATGACCACCAC 60.341 52.381 0.00 0.00 0.00 4.16
321 322 1.392589 CCAATGCTATGACCACCACC 58.607 55.000 0.00 0.00 0.00 4.61
322 323 1.064463 CCAATGCTATGACCACCACCT 60.064 52.381 0.00 0.00 0.00 4.00
323 324 2.621407 CCAATGCTATGACCACCACCTT 60.621 50.000 0.00 0.00 0.00 3.50
324 325 3.091545 CAATGCTATGACCACCACCTTT 58.908 45.455 0.00 0.00 0.00 3.11
325 326 2.969821 TGCTATGACCACCACCTTTT 57.030 45.000 0.00 0.00 0.00 2.27
326 327 3.237268 TGCTATGACCACCACCTTTTT 57.763 42.857 0.00 0.00 0.00 1.94
345 346 4.568152 TTTTGCTTGACCTACAGAAAGC 57.432 40.909 0.00 0.00 44.18 3.51
348 349 1.461127 GCTTGACCTACAGAAAGCACG 59.539 52.381 1.57 0.00 43.55 5.34
349 350 1.461127 CTTGACCTACAGAAAGCACGC 59.539 52.381 0.00 0.00 0.00 5.34
350 351 0.666274 TGACCTACAGAAAGCACGCG 60.666 55.000 3.53 3.53 0.00 6.01
351 352 0.666577 GACCTACAGAAAGCACGCGT 60.667 55.000 5.58 5.58 0.00 6.01
352 353 0.944311 ACCTACAGAAAGCACGCGTG 60.944 55.000 34.01 34.01 0.00 5.34
353 354 1.626654 CCTACAGAAAGCACGCGTGG 61.627 60.000 37.47 23.03 0.00 4.94
354 355 2.227968 CTACAGAAAGCACGCGTGGC 62.228 60.000 37.47 28.57 0.00 5.01
372 373 4.200283 GACCAGCGAGCGGAGGAG 62.200 72.222 11.61 0.00 0.00 3.69
382 383 3.494378 CGGAGGAGCTGCAACATG 58.506 61.111 8.35 0.00 0.00 3.21
383 384 2.758089 CGGAGGAGCTGCAACATGC 61.758 63.158 8.35 0.00 45.29 4.06
392 393 4.024698 GCAACATGCACCGCAAAA 57.975 50.000 0.00 0.00 43.62 2.44
393 394 2.531055 GCAACATGCACCGCAAAAT 58.469 47.368 0.00 0.00 43.62 1.82
394 395 0.164217 GCAACATGCACCGCAAAATG 59.836 50.000 0.00 0.00 43.62 2.32
395 396 0.164217 CAACATGCACCGCAAAATGC 59.836 50.000 0.00 0.00 43.62 3.56
396 397 0.033781 AACATGCACCGCAAAATGCT 59.966 45.000 0.00 0.00 43.62 3.79
397 398 0.033781 ACATGCACCGCAAAATGCTT 59.966 45.000 0.00 0.00 43.62 3.91
398 399 0.717224 CATGCACCGCAAAATGCTTC 59.283 50.000 0.00 0.00 43.62 3.86
399 400 0.733566 ATGCACCGCAAAATGCTTCG 60.734 50.000 0.00 0.00 43.62 3.79
400 401 1.081509 GCACCGCAAAATGCTTCGA 60.082 52.632 0.43 0.00 42.25 3.71
401 402 1.337110 GCACCGCAAAATGCTTCGAC 61.337 55.000 0.43 0.00 42.25 4.20
402 403 0.729140 CACCGCAAAATGCTTCGACC 60.729 55.000 0.43 0.00 42.25 4.79
403 404 1.169661 ACCGCAAAATGCTTCGACCA 61.170 50.000 0.43 0.00 42.25 4.02
404 405 0.171007 CCGCAAAATGCTTCGACCAT 59.829 50.000 0.43 0.00 42.25 3.55
405 406 1.402720 CCGCAAAATGCTTCGACCATT 60.403 47.619 5.00 5.00 42.25 3.16
406 407 1.650153 CGCAAAATGCTTCGACCATTG 59.350 47.619 10.31 3.66 42.25 2.82
407 408 1.994779 GCAAAATGCTTCGACCATTGG 59.005 47.619 10.31 0.00 40.96 3.16
408 409 1.994779 CAAAATGCTTCGACCATTGGC 59.005 47.619 1.54 0.00 33.48 4.52
409 410 0.532115 AAATGCTTCGACCATTGGCC 59.468 50.000 1.54 0.00 33.48 5.36
410 411 0.611618 AATGCTTCGACCATTGGCCA 60.612 50.000 0.00 0.00 32.06 5.36
411 412 0.611618 ATGCTTCGACCATTGGCCAA 60.612 50.000 23.00 23.00 0.00 4.52
412 413 1.212751 GCTTCGACCATTGGCCAAC 59.787 57.895 23.27 7.08 0.00 3.77
413 414 1.523154 GCTTCGACCATTGGCCAACA 61.523 55.000 23.27 0.00 0.00 3.33
414 415 0.523072 CTTCGACCATTGGCCAACAG 59.477 55.000 23.27 17.65 0.00 3.16
415 416 0.109532 TTCGACCATTGGCCAACAGA 59.890 50.000 23.27 12.81 0.00 3.41
416 417 0.321564 TCGACCATTGGCCAACAGAG 60.322 55.000 23.27 12.21 0.00 3.35
417 418 1.885871 GACCATTGGCCAACAGAGC 59.114 57.895 23.27 5.86 0.00 4.09
418 419 0.610232 GACCATTGGCCAACAGAGCT 60.610 55.000 23.27 0.00 0.00 4.09
419 420 0.698238 ACCATTGGCCAACAGAGCTA 59.302 50.000 23.27 0.00 0.00 3.32
420 421 1.098050 CCATTGGCCAACAGAGCTAC 58.902 55.000 23.27 0.00 0.00 3.58
421 422 1.614051 CCATTGGCCAACAGAGCTACA 60.614 52.381 23.27 0.00 0.00 2.74
422 423 2.161855 CATTGGCCAACAGAGCTACAA 58.838 47.619 23.27 0.00 0.00 2.41
423 424 2.584835 TTGGCCAACAGAGCTACAAT 57.415 45.000 16.05 0.00 0.00 2.71
424 425 2.113860 TGGCCAACAGAGCTACAATC 57.886 50.000 0.61 0.00 0.00 2.67
425 426 1.009829 GGCCAACAGAGCTACAATCG 58.990 55.000 0.00 0.00 0.00 3.34
426 427 1.676014 GGCCAACAGAGCTACAATCGT 60.676 52.381 0.00 0.00 0.00 3.73
427 428 1.661112 GCCAACAGAGCTACAATCGTC 59.339 52.381 0.00 0.00 0.00 4.20
428 429 2.675317 GCCAACAGAGCTACAATCGTCT 60.675 50.000 0.00 0.00 0.00 4.18
429 430 3.589988 CCAACAGAGCTACAATCGTCTT 58.410 45.455 0.00 0.00 0.00 3.01
430 431 4.744570 CCAACAGAGCTACAATCGTCTTA 58.255 43.478 0.00 0.00 0.00 2.10
431 432 5.352284 CCAACAGAGCTACAATCGTCTTAT 58.648 41.667 0.00 0.00 0.00 1.73
432 433 5.233050 CCAACAGAGCTACAATCGTCTTATG 59.767 44.000 0.00 0.00 0.00 1.90
433 434 5.836821 ACAGAGCTACAATCGTCTTATGA 57.163 39.130 0.00 0.00 0.00 2.15
434 435 6.208988 ACAGAGCTACAATCGTCTTATGAA 57.791 37.500 0.00 0.00 0.00 2.57
435 436 6.631016 ACAGAGCTACAATCGTCTTATGAAA 58.369 36.000 0.00 0.00 0.00 2.69
436 437 7.097192 ACAGAGCTACAATCGTCTTATGAAAA 58.903 34.615 0.00 0.00 0.00 2.29
437 438 7.602644 ACAGAGCTACAATCGTCTTATGAAAAA 59.397 33.333 0.00 0.00 0.00 1.94
438 439 8.113062 CAGAGCTACAATCGTCTTATGAAAAAG 58.887 37.037 0.00 0.00 0.00 2.27
439 440 6.776094 AGCTACAATCGTCTTATGAAAAAGC 58.224 36.000 0.00 0.00 0.00 3.51
440 441 6.595716 AGCTACAATCGTCTTATGAAAAAGCT 59.404 34.615 0.00 0.00 0.00 3.74
441 442 7.119846 AGCTACAATCGTCTTATGAAAAAGCTT 59.880 33.333 0.00 0.00 30.34 3.74
442 443 7.426743 GCTACAATCGTCTTATGAAAAAGCTTC 59.573 37.037 0.00 0.00 0.00 3.86
443 444 7.202016 ACAATCGTCTTATGAAAAAGCTTCA 57.798 32.000 0.00 0.00 0.00 3.02
444 445 7.648142 ACAATCGTCTTATGAAAAAGCTTCAA 58.352 30.769 0.00 0.00 31.55 2.69
445 446 7.805071 ACAATCGTCTTATGAAAAAGCTTCAAG 59.195 33.333 0.00 0.00 31.55 3.02
446 447 5.689819 TCGTCTTATGAAAAAGCTTCAAGC 58.310 37.500 0.00 0.00 42.84 4.01
455 456 3.172919 GCTTCAAGCGGAGACAGC 58.827 61.111 0.00 0.00 0.00 4.40
456 457 2.734673 GCTTCAAGCGGAGACAGCG 61.735 63.158 0.00 0.00 40.04 5.18
457 458 1.080501 CTTCAAGCGGAGACAGCGA 60.081 57.895 0.00 0.00 40.04 4.93
458 459 0.667487 CTTCAAGCGGAGACAGCGAA 60.667 55.000 0.00 0.00 40.04 4.70
459 460 0.667487 TTCAAGCGGAGACAGCGAAG 60.667 55.000 0.00 0.00 40.04 3.79
521 522 4.838486 GCGACGACGGGAGCTGAG 62.838 72.222 9.67 0.00 40.15 3.35
527 528 3.240134 GACGGGAGCTGAGTGGCAA 62.240 63.158 0.00 0.00 34.17 4.52
536 537 2.191354 CTGAGTGGCAATGCACGTGG 62.191 60.000 18.88 0.86 0.00 4.94
548 549 3.362581 CACGTGGGGTGCTACTATG 57.637 57.895 7.95 0.00 40.33 2.23
549 550 0.821517 CACGTGGGGTGCTACTATGA 59.178 55.000 7.95 0.00 40.33 2.15
551 552 1.112113 CGTGGGGTGCTACTATGAGT 58.888 55.000 0.00 0.00 0.00 3.41
552 553 1.202417 CGTGGGGTGCTACTATGAGTG 60.202 57.143 0.00 0.00 0.00 3.51
553 554 0.830648 TGGGGTGCTACTATGAGTGC 59.169 55.000 0.00 0.00 0.00 4.40
555 556 1.473434 GGGGTGCTACTATGAGTGCAC 60.473 57.143 9.40 9.40 44.63 4.57
602 604 3.319198 GCTGGAACTCCACCCGGA 61.319 66.667 0.73 0.00 42.01 5.14
616 618 1.586154 CCCGGAGATGTTGCAACCAC 61.586 60.000 26.14 18.81 0.00 4.16
647 652 2.514592 GCGAGCTGCAAGGCCATA 60.515 61.111 5.01 0.00 45.45 2.74
648 653 1.895707 GCGAGCTGCAAGGCCATAT 60.896 57.895 5.01 0.00 45.45 1.78
650 655 1.658673 GAGCTGCAAGGCCATATGC 59.341 57.895 18.20 18.20 42.86 3.14
761 779 1.538629 TGGGAGAGGTGGATGCACA 60.539 57.895 19.67 0.00 0.00 4.57
762 780 1.078143 GGGAGAGGTGGATGCACAC 60.078 63.158 19.67 12.06 40.60 3.82
784 802 1.737793 CTCCATCCAACGGCTACAAAC 59.262 52.381 0.00 0.00 0.00 2.93
791 809 3.078837 CCAACGGCTACAAACCACTTAT 58.921 45.455 0.00 0.00 0.00 1.73
809 827 4.895889 ACTTATGGACAGAGATCGGATGAA 59.104 41.667 0.00 0.00 0.00 2.57
833 851 1.135527 CCATCAGCATGGCGTGAAATT 59.864 47.619 11.71 0.00 43.55 1.82
911 943 2.897972 GCTACCGACCGACCCAAT 59.102 61.111 0.00 0.00 0.00 3.16
1161 1199 2.668212 CGCTTCCGCCAGGTCAAA 60.668 61.111 0.00 0.00 39.05 2.69
1217 1255 0.527817 GCCGAGTACGATTCCTGGTG 60.528 60.000 0.00 0.00 42.66 4.17
1282 1326 2.345760 GGACACGGCGGGAACTCTA 61.346 63.158 19.75 0.00 0.00 2.43
1395 1439 1.950909 AGAGGCCGTTCTAGAATCGAG 59.049 52.381 21.34 14.89 0.00 4.04
1463 1919 1.869574 CGTGCGTGGTGAGAGATCG 60.870 63.158 0.00 0.00 0.00 3.69
1464 1920 1.213013 GTGCGTGGTGAGAGATCGT 59.787 57.895 0.00 0.00 0.00 3.73
1505 1961 5.416952 AGTTCTCTGTAATTTTCATGCCCTG 59.583 40.000 0.00 0.00 0.00 4.45
1520 1976 1.683385 GCCCTGGCACTAATTGATTCC 59.317 52.381 2.58 0.00 41.49 3.01
1538 1994 2.743752 CGTGCCTGAATGCTGACGG 61.744 63.158 0.00 0.00 29.90 4.79
1557 2018 3.391296 ACGGCTCACCATGATAACCTATT 59.609 43.478 0.00 0.00 34.57 1.73
1660 2121 4.627611 ACGAGATTTGCAAATGATGAGG 57.372 40.909 28.67 13.38 0.00 3.86
1661 2122 4.264253 ACGAGATTTGCAAATGATGAGGA 58.736 39.130 28.67 0.00 0.00 3.71
1662 2123 4.095483 ACGAGATTTGCAAATGATGAGGAC 59.905 41.667 28.67 11.70 0.00 3.85
1663 2124 4.095334 CGAGATTTGCAAATGATGAGGACA 59.905 41.667 28.67 0.00 0.00 4.02
1664 2125 5.578005 AGATTTGCAAATGATGAGGACAG 57.422 39.130 28.67 0.00 0.00 3.51
1665 2126 4.401519 AGATTTGCAAATGATGAGGACAGG 59.598 41.667 28.67 0.00 0.00 4.00
1666 2127 1.466856 TGCAAATGATGAGGACAGGC 58.533 50.000 0.00 0.00 0.00 4.85
1667 2128 1.005097 TGCAAATGATGAGGACAGGCT 59.995 47.619 0.00 0.00 0.00 4.58
1752 2213 3.393426 CCCCTGGGTAAGTAGAGTACA 57.607 52.381 12.71 0.00 0.00 2.90
1753 2214 3.924922 CCCCTGGGTAAGTAGAGTACAT 58.075 50.000 12.71 0.00 0.00 2.29
1754 2215 3.641906 CCCCTGGGTAAGTAGAGTACATG 59.358 52.174 12.71 0.00 0.00 3.21
1755 2216 3.069729 CCCTGGGTAAGTAGAGTACATGC 59.930 52.174 3.97 0.00 0.00 4.06
1756 2217 3.243434 CCTGGGTAAGTAGAGTACATGCG 60.243 52.174 0.00 0.00 0.00 4.73
1757 2218 3.359033 TGGGTAAGTAGAGTACATGCGT 58.641 45.455 0.00 0.00 0.00 5.24
1758 2219 3.129813 TGGGTAAGTAGAGTACATGCGTG 59.870 47.826 3.82 3.82 0.00 5.34
1804 2265 0.465097 ATCAGATGCCTTTGCCTCCG 60.465 55.000 0.00 0.00 33.08 4.63
1819 2280 1.411394 CTCCGTTTTGCAATGTGCTG 58.589 50.000 0.00 0.00 45.31 4.41
1829 2450 3.738982 TGCAATGTGCTGTAGTACAAGT 58.261 40.909 6.89 0.00 45.31 3.16
1900 2522 3.181497 GCGTATTGTGCAGAAATCATGGT 60.181 43.478 0.00 0.00 0.00 3.55
1901 2523 4.675146 GCGTATTGTGCAGAAATCATGGTT 60.675 41.667 0.00 0.00 0.00 3.67
1961 2583 4.950050 ACGGACATATTCAGATCTTGACC 58.050 43.478 0.00 0.00 34.94 4.02
1976 2598 0.538584 TGACCTCAGGCATACAGCTG 59.461 55.000 13.48 13.48 44.79 4.24
1997 2619 3.960755 TGGAACAGTTCAGACTTCAGAGA 59.039 43.478 15.36 0.00 32.54 3.10
2054 2680 0.036164 TGTGGTAGCAGGCGTTCATT 59.964 50.000 0.00 0.00 0.00 2.57
2069 2695 6.489022 AGGCGTTCATTTTACTTTACCTTTCT 59.511 34.615 0.00 0.00 0.00 2.52
2070 2696 6.581166 GGCGTTCATTTTACTTTACCTTTCTG 59.419 38.462 0.00 0.00 0.00 3.02
2071 2697 7.357303 GCGTTCATTTTACTTTACCTTTCTGA 58.643 34.615 0.00 0.00 0.00 3.27
2138 2764 4.453136 ACTTACAAATTATCCGTGCGTTGT 59.547 37.500 0.00 0.00 33.94 3.32
2145 2771 2.380084 ATCCGTGCGTTGTAACAGAT 57.620 45.000 0.00 0.00 0.00 2.90
2183 2809 2.930887 GCCGTCATAGTTGTGAAGCTGA 60.931 50.000 0.00 0.00 30.83 4.26
2191 2818 2.965831 AGTTGTGAAGCTGACTGGACTA 59.034 45.455 0.00 0.00 0.00 2.59
2192 2819 3.580458 AGTTGTGAAGCTGACTGGACTAT 59.420 43.478 0.00 0.00 0.00 2.12
2193 2820 4.040952 AGTTGTGAAGCTGACTGGACTATT 59.959 41.667 0.00 0.00 0.00 1.73
2194 2821 5.246203 AGTTGTGAAGCTGACTGGACTATTA 59.754 40.000 0.00 0.00 0.00 0.98
2203 2830 9.515226 AAGCTGACTGGACTATTAATTGTAAAA 57.485 29.630 2.41 0.00 0.00 1.52
2204 2831 9.167311 AGCTGACTGGACTATTAATTGTAAAAG 57.833 33.333 2.41 4.16 0.00 2.27
2218 2845 9.567848 TTAATTGTAAAAGAAGCCGATTTCATC 57.432 29.630 0.00 0.00 0.00 2.92
2219 2846 6.567687 TTGTAAAAGAAGCCGATTTCATCA 57.432 33.333 0.00 0.00 0.00 3.07
2269 3190 8.282256 AGAAAACCAATAGTTCTAGGCCATATT 58.718 33.333 5.01 0.00 37.88 1.28
2270 3191 8.465273 AAAACCAATAGTTCTAGGCCATATTC 57.535 34.615 5.01 0.00 37.88 1.75
2271 3192 6.763715 ACCAATAGTTCTAGGCCATATTCA 57.236 37.500 5.01 0.00 0.00 2.57
2272 3193 6.773638 ACCAATAGTTCTAGGCCATATTCAG 58.226 40.000 5.01 0.00 0.00 3.02
2273 3194 5.645497 CCAATAGTTCTAGGCCATATTCAGC 59.355 44.000 5.01 0.00 0.00 4.26
2274 3195 6.233434 CAATAGTTCTAGGCCATATTCAGCA 58.767 40.000 5.01 0.00 0.00 4.41
2276 3197 4.904241 AGTTCTAGGCCATATTCAGCATC 58.096 43.478 5.01 0.00 0.00 3.91
2283 3275 6.336842 AGGCCATATTCAGCATCAAAATAC 57.663 37.500 5.01 0.00 0.00 1.89
2543 3538 3.288308 CTGACAGCCCTTCTCGCGT 62.288 63.158 5.77 0.00 0.00 6.01
2559 3554 0.458716 GCGTCCCTAGTTGCAGTCTC 60.459 60.000 0.00 0.00 0.00 3.36
2566 3561 3.243336 CCTAGTTGCAGTCTCGTTGTAC 58.757 50.000 0.00 0.00 0.00 2.90
2581 3576 2.156343 TGTACGCATGCTGTTGTGTA 57.844 45.000 17.13 6.45 40.60 2.90
2584 3579 0.533978 ACGCATGCTGTTGTGTACCA 60.534 50.000 17.13 0.00 38.51 3.25
2588 3583 2.503331 CATGCTGTTGTGTACCAAGGA 58.497 47.619 0.00 0.00 32.51 3.36
2604 3599 4.243007 CAAGGATGGACAAAAAGTGGTC 57.757 45.455 0.00 0.00 0.00 4.02
2605 3600 2.504367 AGGATGGACAAAAAGTGGTCG 58.496 47.619 0.00 0.00 34.87 4.79
2606 3601 2.158667 AGGATGGACAAAAAGTGGTCGT 60.159 45.455 0.00 0.00 34.87 4.34
2607 3602 2.225727 GGATGGACAAAAAGTGGTCGTC 59.774 50.000 0.00 0.00 34.87 4.20
2618 3627 2.048503 GGTCGTCCCAGTTCCGTG 60.049 66.667 0.00 0.00 0.00 4.94
2620 3629 1.372623 GTCGTCCCAGTTCCGTGTC 60.373 63.158 0.00 0.00 0.00 3.67
2639 3648 1.230635 CGAGGGTGGACTTGCAACTG 61.231 60.000 0.00 0.00 0.00 3.16
2717 3777 1.131303 AATGAGTCGGGTCCCCAACA 61.131 55.000 1.00 0.00 35.37 3.33
2745 3805 2.273449 CAGGGGGTGGAGCACATC 59.727 66.667 0.00 0.00 35.86 3.06
2759 3819 1.088340 CACATCGAGCTGGAAGGCAG 61.088 60.000 1.37 0.00 34.17 4.85
2760 3820 1.220206 CATCGAGCTGGAAGGCAGT 59.780 57.895 1.37 0.00 34.17 4.40
2768 3828 2.045926 GGAAGGCAGTGCGATGGT 60.046 61.111 9.45 0.00 0.00 3.55
2770 3830 1.503542 GAAGGCAGTGCGATGGTTG 59.496 57.895 9.45 0.00 0.00 3.77
2775 3835 3.049674 AGTGCGATGGTTGTGGCG 61.050 61.111 0.00 0.00 0.00 5.69
2779 3839 3.027170 GCGATGGTTGTGGCGAGTG 62.027 63.158 0.00 0.00 0.00 3.51
2781 3841 2.672996 ATGGTTGTGGCGAGTGGC 60.673 61.111 0.00 0.00 42.51 5.01
2804 3864 1.670406 GGCGGCCTCTGCTATGATG 60.670 63.158 12.87 0.00 37.74 3.07
2805 3865 1.070445 GCGGCCTCTGCTATGATGT 59.930 57.895 0.00 0.00 37.74 3.06
2808 3868 1.226686 GGCCTCTGCTATGATGTGCG 61.227 60.000 0.00 0.00 37.74 5.34
2809 3869 0.249615 GCCTCTGCTATGATGTGCGA 60.250 55.000 0.00 0.00 33.53 5.10
2815 3875 2.610833 CTGCTATGATGTGCGAACATGT 59.389 45.455 15.49 4.95 0.00 3.21
2825 3885 3.434258 CGAACATGTCGGTGATGGA 57.566 52.632 0.00 0.00 46.45 3.41
2834 3894 0.683179 TCGGTGATGGAGTCGGTGAT 60.683 55.000 0.00 0.00 0.00 3.06
2841 3901 2.583593 GAGTCGGTGATGGCGAGC 60.584 66.667 0.00 0.00 0.00 5.03
2895 3955 3.361977 GCGGGGCACACGTGAAAT 61.362 61.111 25.01 0.00 0.00 2.17
2899 3959 1.586154 GGGGCACACGTGAAATGGAG 61.586 60.000 25.01 3.83 0.00 3.86
2910 3970 1.607801 GAAATGGAGGGTGCCAAGCC 61.608 60.000 0.00 0.00 42.16 4.35
2926 3986 4.072088 CCGGACAAAGACGCGTGC 62.072 66.667 20.70 8.74 0.00 5.34
2927 3987 3.036084 CGGACAAAGACGCGTGCT 61.036 61.111 20.70 11.30 0.00 4.40
2928 3988 2.551270 GGACAAAGACGCGTGCTG 59.449 61.111 20.70 13.59 0.00 4.41
2929 3989 2.127609 GACAAAGACGCGTGCTGC 60.128 61.111 20.70 0.63 41.47 5.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.773630 CAACACCGGTAGCACGCG 61.774 66.667 6.87 3.53 0.00 6.01
22 23 3.419759 CCAACACCGGTAGCACGC 61.420 66.667 6.87 0.00 0.00 5.34
23 24 1.289109 CTTCCAACACCGGTAGCACG 61.289 60.000 6.87 0.00 0.00 5.34
24 25 0.250166 ACTTCCAACACCGGTAGCAC 60.250 55.000 6.87 0.00 0.00 4.40
25 26 0.250124 CACTTCCAACACCGGTAGCA 60.250 55.000 6.87 0.00 0.00 3.49
26 27 0.953960 CCACTTCCAACACCGGTAGC 60.954 60.000 6.87 0.00 0.00 3.58
27 28 0.953960 GCCACTTCCAACACCGGTAG 60.954 60.000 6.87 1.60 0.00 3.18
28 29 1.071814 GCCACTTCCAACACCGGTA 59.928 57.895 6.87 0.00 0.00 4.02
29 30 2.203294 GCCACTTCCAACACCGGT 60.203 61.111 0.00 0.00 0.00 5.28
30 31 2.983592 GGCCACTTCCAACACCGG 60.984 66.667 0.00 0.00 0.00 5.28
31 32 1.826054 TTGGCCACTTCCAACACCG 60.826 57.895 3.88 0.00 40.92 4.94
32 33 4.268720 TTGGCCACTTCCAACACC 57.731 55.556 3.88 0.00 40.92 4.16
36 37 0.404040 CCCTAGTTGGCCACTTCCAA 59.596 55.000 3.88 0.00 43.36 3.53
37 38 0.770557 ACCCTAGTTGGCCACTTCCA 60.771 55.000 3.88 0.00 36.88 3.53
38 39 0.322546 CACCCTAGTTGGCCACTTCC 60.323 60.000 3.88 0.00 36.88 3.46
39 40 0.400594 ACACCCTAGTTGGCCACTTC 59.599 55.000 3.88 0.00 36.88 3.01
40 41 0.850784 AACACCCTAGTTGGCCACTT 59.149 50.000 3.88 0.00 36.88 3.16
41 42 0.110486 CAACACCCTAGTTGGCCACT 59.890 55.000 3.88 9.18 43.89 4.00
42 43 2.641197 CAACACCCTAGTTGGCCAC 58.359 57.895 3.88 0.00 43.89 5.01
47 48 1.519408 CGGTTCCAACACCCTAGTTG 58.481 55.000 0.00 0.00 46.44 3.16
48 49 0.399075 CCGGTTCCAACACCCTAGTT 59.601 55.000 0.00 0.00 32.48 2.24
49 50 2.063774 CCGGTTCCAACACCCTAGT 58.936 57.895 0.00 0.00 32.48 2.57
50 51 1.376812 GCCGGTTCCAACACCCTAG 60.377 63.158 1.90 0.00 32.48 3.02
51 52 0.544833 TAGCCGGTTCCAACACCCTA 60.545 55.000 1.90 0.00 32.48 3.53
52 53 1.844289 TAGCCGGTTCCAACACCCT 60.844 57.895 1.90 0.00 32.48 4.34
53 54 1.673337 GTAGCCGGTTCCAACACCC 60.673 63.158 1.90 0.00 32.48 4.61
54 55 2.030958 CGTAGCCGGTTCCAACACC 61.031 63.158 1.90 0.00 0.00 4.16
55 56 1.005867 TCGTAGCCGGTTCCAACAC 60.006 57.895 1.90 0.00 33.95 3.32
56 57 1.005867 GTCGTAGCCGGTTCCAACA 60.006 57.895 1.90 0.00 33.95 3.33
57 58 0.600782 TTGTCGTAGCCGGTTCCAAC 60.601 55.000 1.90 0.00 33.95 3.77
58 59 0.106335 TTTGTCGTAGCCGGTTCCAA 59.894 50.000 1.90 0.00 33.95 3.53
59 60 0.322322 ATTTGTCGTAGCCGGTTCCA 59.678 50.000 1.90 0.00 33.95 3.53
60 61 0.725117 CATTTGTCGTAGCCGGTTCC 59.275 55.000 1.90 0.00 33.95 3.62
61 62 0.096454 GCATTTGTCGTAGCCGGTTC 59.904 55.000 1.90 0.00 33.95 3.62
62 63 0.321298 AGCATTTGTCGTAGCCGGTT 60.321 50.000 1.90 0.00 33.95 4.44
63 64 0.321298 AAGCATTTGTCGTAGCCGGT 60.321 50.000 1.90 0.00 33.95 5.28
64 65 0.096976 CAAGCATTTGTCGTAGCCGG 59.903 55.000 0.00 0.00 33.95 6.13
65 66 1.075542 TCAAGCATTTGTCGTAGCCG 58.924 50.000 0.00 0.00 35.73 5.52
66 67 2.414161 GGTTCAAGCATTTGTCGTAGCC 60.414 50.000 0.00 0.00 35.73 3.93
67 68 2.225491 TGGTTCAAGCATTTGTCGTAGC 59.775 45.455 0.00 0.00 35.73 3.58
68 69 4.406069 CATGGTTCAAGCATTTGTCGTAG 58.594 43.478 0.00 0.00 33.46 3.51
69 70 3.365868 GCATGGTTCAAGCATTTGTCGTA 60.366 43.478 0.00 0.00 33.46 3.43
70 71 2.607771 GCATGGTTCAAGCATTTGTCGT 60.608 45.455 0.00 0.00 33.46 4.34
71 72 1.987770 GCATGGTTCAAGCATTTGTCG 59.012 47.619 0.00 0.00 33.46 4.35
72 73 1.987770 CGCATGGTTCAAGCATTTGTC 59.012 47.619 0.00 0.00 33.46 3.18
73 74 1.936203 GCGCATGGTTCAAGCATTTGT 60.936 47.619 0.30 0.00 33.46 2.83
74 75 0.717224 GCGCATGGTTCAAGCATTTG 59.283 50.000 0.30 0.00 33.46 2.32
75 76 0.604578 AGCGCATGGTTCAAGCATTT 59.395 45.000 11.47 0.00 33.46 2.32
76 77 0.108992 CAGCGCATGGTTCAAGCATT 60.109 50.000 11.47 0.00 33.46 3.56
77 78 1.509463 CAGCGCATGGTTCAAGCAT 59.491 52.632 11.47 0.00 36.65 3.79
78 79 2.956194 CAGCGCATGGTTCAAGCA 59.044 55.556 11.47 0.00 0.00 3.91
79 80 2.505557 GCAGCGCATGGTTCAAGC 60.506 61.111 11.47 0.00 0.00 4.01
80 81 1.005294 GTTGCAGCGCATGGTTCAAG 61.005 55.000 11.47 0.00 38.76 3.02
81 82 1.007502 GTTGCAGCGCATGGTTCAA 60.008 52.632 11.47 0.89 38.76 2.69
82 83 0.605050 TAGTTGCAGCGCATGGTTCA 60.605 50.000 11.47 0.00 38.76 3.18
83 84 0.179189 GTAGTTGCAGCGCATGGTTC 60.179 55.000 11.47 0.00 38.76 3.62
84 85 0.888736 TGTAGTTGCAGCGCATGGTT 60.889 50.000 11.47 0.00 38.76 3.67
85 86 1.300971 CTGTAGTTGCAGCGCATGGT 61.301 55.000 11.47 0.00 38.76 3.55
86 87 1.426621 CTGTAGTTGCAGCGCATGG 59.573 57.895 11.47 0.00 38.76 3.66
87 88 1.426621 CCTGTAGTTGCAGCGCATG 59.573 57.895 11.47 6.31 38.76 4.06
88 89 2.401766 GCCTGTAGTTGCAGCGCAT 61.402 57.895 11.47 0.00 38.76 4.73
89 90 3.049674 GCCTGTAGTTGCAGCGCA 61.050 61.111 11.47 0.00 36.47 6.09
90 91 3.049674 TGCCTGTAGTTGCAGCGC 61.050 61.111 0.00 0.00 35.28 5.92
91 92 2.680913 GGTGCCTGTAGTTGCAGCG 61.681 63.158 0.00 0.00 44.75 5.18
92 93 3.267974 GGTGCCTGTAGTTGCAGC 58.732 61.111 0.00 0.00 46.96 5.25
93 94 0.037697 TACGGTGCCTGTAGTTGCAG 60.038 55.000 0.00 0.00 38.34 4.41
94 95 0.611200 ATACGGTGCCTGTAGTTGCA 59.389 50.000 0.00 0.00 34.54 4.08
95 96 1.287425 GATACGGTGCCTGTAGTTGC 58.713 55.000 0.00 0.00 0.00 4.17
96 97 1.206132 TGGATACGGTGCCTGTAGTTG 59.794 52.381 0.00 0.00 42.51 3.16
97 98 1.480954 CTGGATACGGTGCCTGTAGTT 59.519 52.381 0.00 0.00 42.51 2.24
98 99 1.112113 CTGGATACGGTGCCTGTAGT 58.888 55.000 0.00 0.00 42.51 2.73
99 100 0.389391 CCTGGATACGGTGCCTGTAG 59.611 60.000 0.00 0.00 43.49 2.74
100 101 0.324923 ACCTGGATACGGTGCCTGTA 60.325 55.000 0.00 0.00 43.49 2.74
101 102 1.612442 ACCTGGATACGGTGCCTGT 60.612 57.895 0.00 0.00 43.49 4.00
102 103 3.309582 ACCTGGATACGGTGCCTG 58.690 61.111 0.00 0.00 43.49 4.85
107 108 1.338769 GCAACTTCACCTGGATACGGT 60.339 52.381 0.00 0.00 43.49 4.83
108 109 1.369625 GCAACTTCACCTGGATACGG 58.630 55.000 0.00 0.00 45.15 4.02
109 110 0.999406 CGCAACTTCACCTGGATACG 59.001 55.000 0.00 0.00 42.51 3.06
110 111 2.271800 CTCGCAACTTCACCTGGATAC 58.728 52.381 0.00 0.00 0.00 2.24
111 112 1.207089 CCTCGCAACTTCACCTGGATA 59.793 52.381 0.00 0.00 0.00 2.59
112 113 0.036010 CCTCGCAACTTCACCTGGAT 60.036 55.000 0.00 0.00 0.00 3.41
113 114 1.371183 CCTCGCAACTTCACCTGGA 59.629 57.895 0.00 0.00 0.00 3.86
114 115 1.672356 CCCTCGCAACTTCACCTGG 60.672 63.158 0.00 0.00 0.00 4.45
115 116 1.672356 CCCCTCGCAACTTCACCTG 60.672 63.158 0.00 0.00 0.00 4.00
116 117 2.113243 GACCCCTCGCAACTTCACCT 62.113 60.000 0.00 0.00 0.00 4.00
117 118 1.671379 GACCCCTCGCAACTTCACC 60.671 63.158 0.00 0.00 0.00 4.02
118 119 2.027625 CGACCCCTCGCAACTTCAC 61.028 63.158 0.00 0.00 31.91 3.18
119 120 2.154798 CTCGACCCCTCGCAACTTCA 62.155 60.000 0.00 0.00 39.96 3.02
120 121 1.446272 CTCGACCCCTCGCAACTTC 60.446 63.158 0.00 0.00 39.96 3.01
121 122 2.657237 CTCGACCCCTCGCAACTT 59.343 61.111 0.00 0.00 39.96 2.66
122 123 3.382832 CCTCGACCCCTCGCAACT 61.383 66.667 0.00 0.00 39.96 3.16
123 124 3.692406 ACCTCGACCCCTCGCAAC 61.692 66.667 0.00 0.00 39.96 4.17
124 125 3.691342 CACCTCGACCCCTCGCAA 61.691 66.667 0.00 0.00 39.96 4.85
127 128 4.135153 CAGCACCTCGACCCCTCG 62.135 72.222 0.00 0.00 41.65 4.63
128 129 4.459089 GCAGCACCTCGACCCCTC 62.459 72.222 0.00 0.00 0.00 4.30
148 149 1.731424 CGTAGCCGGTTATAGCATCCG 60.731 57.143 1.90 0.00 43.30 4.18
149 150 1.992170 CGTAGCCGGTTATAGCATCC 58.008 55.000 1.90 0.00 0.00 3.51
161 162 0.877649 TCGTAGCTCTACCGTAGCCG 60.878 60.000 0.18 0.00 41.02 5.52
162 163 0.585838 GTCGTAGCTCTACCGTAGCC 59.414 60.000 0.18 0.00 41.02 3.93
163 164 0.585838 GGTCGTAGCTCTACCGTAGC 59.414 60.000 0.18 0.00 40.40 3.58
164 165 0.857935 CGGTCGTAGCTCTACCGTAG 59.142 60.000 20.53 0.00 46.03 3.51
165 166 2.977700 CGGTCGTAGCTCTACCGTA 58.022 57.895 20.53 0.00 46.03 4.02
166 167 3.805267 CGGTCGTAGCTCTACCGT 58.195 61.111 20.53 0.00 46.03 4.83
168 169 2.117156 TGCCGGTCGTAGCTCTACC 61.117 63.158 1.90 0.00 32.61 3.18
169 170 1.063811 GTGCCGGTCGTAGCTCTAC 59.936 63.158 1.90 0.00 0.00 2.59
170 171 0.961857 TTGTGCCGGTCGTAGCTCTA 60.962 55.000 1.90 0.00 0.00 2.43
171 172 2.214181 CTTGTGCCGGTCGTAGCTCT 62.214 60.000 1.90 0.00 0.00 4.09
172 173 1.805945 CTTGTGCCGGTCGTAGCTC 60.806 63.158 1.90 0.00 0.00 4.09
173 174 1.605058 ATCTTGTGCCGGTCGTAGCT 61.605 55.000 1.90 0.00 0.00 3.32
174 175 1.153628 ATCTTGTGCCGGTCGTAGC 60.154 57.895 1.90 0.00 0.00 3.58
175 176 0.806102 CCATCTTGTGCCGGTCGTAG 60.806 60.000 1.90 0.00 0.00 3.51
176 177 1.216977 CCATCTTGTGCCGGTCGTA 59.783 57.895 1.90 0.00 0.00 3.43
177 178 2.047274 CCATCTTGTGCCGGTCGT 60.047 61.111 1.90 0.00 0.00 4.34
178 179 1.811266 CTCCATCTTGTGCCGGTCG 60.811 63.158 1.90 0.00 0.00 4.79
179 180 2.109126 GCTCCATCTTGTGCCGGTC 61.109 63.158 1.90 0.00 0.00 4.79
180 181 2.045926 GCTCCATCTTGTGCCGGT 60.046 61.111 1.90 0.00 0.00 5.28
181 182 2.110967 CAGCTCCATCTTGTGCCGG 61.111 63.158 0.00 0.00 0.00 6.13
182 183 2.758089 GCAGCTCCATCTTGTGCCG 61.758 63.158 0.00 0.00 0.00 5.69
183 184 1.246056 TTGCAGCTCCATCTTGTGCC 61.246 55.000 0.00 0.00 32.99 5.01
184 185 0.109412 GTTGCAGCTCCATCTTGTGC 60.109 55.000 0.00 0.00 34.62 4.57
185 186 0.524862 GGTTGCAGCTCCATCTTGTG 59.475 55.000 0.00 0.00 0.00 3.33
186 187 0.111061 TGGTTGCAGCTCCATCTTGT 59.889 50.000 0.00 0.00 0.00 3.16
187 188 0.809385 CTGGTTGCAGCTCCATCTTG 59.191 55.000 9.68 0.00 33.01 3.02
188 189 0.403271 ACTGGTTGCAGCTCCATCTT 59.597 50.000 9.68 0.00 33.01 2.40
189 190 0.322277 CACTGGTTGCAGCTCCATCT 60.322 55.000 9.68 0.00 33.01 2.90
190 191 0.607489 ACACTGGTTGCAGCTCCATC 60.607 55.000 9.68 0.00 33.01 3.51
191 192 0.892358 CACACTGGTTGCAGCTCCAT 60.892 55.000 9.68 0.42 33.01 3.41
192 193 1.526686 CACACTGGTTGCAGCTCCA 60.527 57.895 0.00 9.05 0.00 3.86
193 194 2.912624 GCACACTGGTTGCAGCTCC 61.913 63.158 0.00 0.00 0.00 4.70
194 195 2.641559 GCACACTGGTTGCAGCTC 59.358 61.111 0.00 0.00 0.00 4.09
195 196 2.908940 GGCACACTGGTTGCAGCT 60.909 61.111 0.00 0.00 31.76 4.24
196 197 2.091102 ATTGGCACACTGGTTGCAGC 62.091 55.000 0.00 0.00 39.29 5.25
197 198 0.390124 AATTGGCACACTGGTTGCAG 59.610 50.000 5.31 0.00 39.29 4.41
198 199 0.104487 CAATTGGCACACTGGTTGCA 59.896 50.000 0.00 0.00 39.29 4.08
199 200 1.223417 GCAATTGGCACACTGGTTGC 61.223 55.000 7.72 0.00 43.97 4.17
200 201 2.903284 GCAATTGGCACACTGGTTG 58.097 52.632 7.72 0.00 43.97 3.77
211 212 1.136565 CGTTGGCCGTAGCAATTGG 59.863 57.895 7.72 0.00 42.56 3.16
212 213 1.514014 GCGTTGGCCGTAGCAATTG 60.514 57.895 10.68 0.00 42.56 2.32
213 214 2.874751 GCGTTGGCCGTAGCAATT 59.125 55.556 10.68 0.00 42.56 2.32
236 237 3.526534 CTTTCTTTGGTTCCGGCAAAAA 58.473 40.909 0.00 0.00 0.00 1.94
237 238 2.740256 GCTTTCTTTGGTTCCGGCAAAA 60.740 45.455 0.00 0.00 0.00 2.44
238 239 1.202475 GCTTTCTTTGGTTCCGGCAAA 60.202 47.619 0.00 0.38 0.00 3.68
239 240 0.387565 GCTTTCTTTGGTTCCGGCAA 59.612 50.000 0.00 0.00 0.00 4.52
240 241 0.753479 TGCTTTCTTTGGTTCCGGCA 60.753 50.000 0.00 0.00 0.00 5.69
241 242 0.039165 CTGCTTTCTTTGGTTCCGGC 60.039 55.000 0.00 0.00 0.00 6.13
242 243 0.598065 CCTGCTTTCTTTGGTTCCGG 59.402 55.000 0.00 0.00 0.00 5.14
243 244 0.598065 CCCTGCTTTCTTTGGTTCCG 59.402 55.000 0.00 0.00 0.00 4.30
244 245 1.704641 ACCCTGCTTTCTTTGGTTCC 58.295 50.000 0.00 0.00 0.00 3.62
245 246 3.457234 CAAACCCTGCTTTCTTTGGTTC 58.543 45.455 0.00 0.00 38.31 3.62
246 247 3.541996 CAAACCCTGCTTTCTTTGGTT 57.458 42.857 0.00 0.00 40.91 3.67
258 259 3.864686 CGCCGATCGCAAACCCTG 61.865 66.667 10.32 0.00 37.30 4.45
267 268 4.559229 TCAGCTCTGCGCCGATCG 62.559 66.667 8.51 8.51 40.39 3.69
268 269 2.657944 CTCAGCTCTGCGCCGATC 60.658 66.667 4.18 0.00 40.39 3.69
269 270 4.218578 CCTCAGCTCTGCGCCGAT 62.219 66.667 4.18 0.00 40.39 4.18
274 275 2.357881 TTGCACCTCAGCTCTGCG 60.358 61.111 0.00 0.00 33.35 5.18
275 276 2.331132 GGTTGCACCTCAGCTCTGC 61.331 63.158 0.00 0.00 34.73 4.26
276 277 0.954449 CTGGTTGCACCTCAGCTCTG 60.954 60.000 6.83 0.00 39.58 3.35
277 278 1.374190 CTGGTTGCACCTCAGCTCT 59.626 57.895 6.83 0.00 39.58 4.09
278 279 3.978272 CTGGTTGCACCTCAGCTC 58.022 61.111 6.83 0.00 39.58 4.09
288 289 0.600782 CATTGGGTGTTGCTGGTTGC 60.601 55.000 0.00 0.00 43.25 4.17
289 290 0.600782 GCATTGGGTGTTGCTGGTTG 60.601 55.000 0.00 0.00 35.95 3.77
290 291 0.760189 AGCATTGGGTGTTGCTGGTT 60.760 50.000 0.00 0.00 46.96 3.67
291 292 1.152483 AGCATTGGGTGTTGCTGGT 60.152 52.632 0.00 0.00 46.96 4.00
292 293 3.781760 AGCATTGGGTGTTGCTGG 58.218 55.556 0.00 0.00 46.96 4.85
295 296 1.134946 GGTCATAGCATTGGGTGTTGC 59.865 52.381 0.00 0.00 39.17 4.17
296 297 2.164219 GTGGTCATAGCATTGGGTGTTG 59.836 50.000 0.00 0.00 0.00 3.33
297 298 2.446435 GTGGTCATAGCATTGGGTGTT 58.554 47.619 0.00 0.00 0.00 3.32
298 299 1.340991 GGTGGTCATAGCATTGGGTGT 60.341 52.381 0.00 0.00 0.00 4.16
299 300 1.340893 TGGTGGTCATAGCATTGGGTG 60.341 52.381 0.00 0.00 0.00 4.61
300 301 0.998928 TGGTGGTCATAGCATTGGGT 59.001 50.000 0.00 0.00 0.00 4.51
301 302 1.392589 GTGGTGGTCATAGCATTGGG 58.607 55.000 0.00 0.00 0.00 4.12
302 303 1.064463 AGGTGGTGGTCATAGCATTGG 60.064 52.381 0.00 0.00 0.00 3.16
303 304 2.425143 AGGTGGTGGTCATAGCATTG 57.575 50.000 0.00 0.00 0.00 2.82
304 305 3.456380 AAAGGTGGTGGTCATAGCATT 57.544 42.857 0.00 0.00 0.00 3.56
305 306 3.456380 AAAAGGTGGTGGTCATAGCAT 57.544 42.857 0.00 0.00 0.00 3.79
306 307 2.969821 AAAAGGTGGTGGTCATAGCA 57.030 45.000 0.00 0.00 0.00 3.49
323 324 4.400884 TGCTTTCTGTAGGTCAAGCAAAAA 59.599 37.500 3.00 0.00 39.89 1.94
324 325 3.951037 TGCTTTCTGTAGGTCAAGCAAAA 59.049 39.130 3.00 0.00 39.89 2.44
325 326 3.315191 GTGCTTTCTGTAGGTCAAGCAAA 59.685 43.478 7.00 0.00 43.67 3.68
326 327 2.878406 GTGCTTTCTGTAGGTCAAGCAA 59.122 45.455 7.00 0.00 43.67 3.91
327 328 2.494059 GTGCTTTCTGTAGGTCAAGCA 58.506 47.619 1.34 1.34 40.46 3.91
328 329 1.461127 CGTGCTTTCTGTAGGTCAAGC 59.539 52.381 0.00 0.00 0.00 4.01
329 330 1.461127 GCGTGCTTTCTGTAGGTCAAG 59.539 52.381 0.00 0.00 0.00 3.02
330 331 1.508632 GCGTGCTTTCTGTAGGTCAA 58.491 50.000 0.00 0.00 0.00 3.18
331 332 0.666274 CGCGTGCTTTCTGTAGGTCA 60.666 55.000 0.00 0.00 0.00 4.02
332 333 0.666577 ACGCGTGCTTTCTGTAGGTC 60.667 55.000 12.93 0.00 0.00 3.85
333 334 0.944311 CACGCGTGCTTTCTGTAGGT 60.944 55.000 28.16 0.00 0.00 3.08
334 335 1.626654 CCACGCGTGCTTTCTGTAGG 61.627 60.000 33.17 12.20 0.00 3.18
335 336 1.781555 CCACGCGTGCTTTCTGTAG 59.218 57.895 33.17 12.69 0.00 2.74
336 337 2.314647 GCCACGCGTGCTTTCTGTA 61.315 57.895 33.17 0.00 0.00 2.74
337 338 3.649986 GCCACGCGTGCTTTCTGT 61.650 61.111 33.17 0.00 0.00 3.41
355 356 4.200283 CTCCTCCGCTCGCTGGTC 62.200 72.222 0.00 0.00 0.00 4.02
358 359 4.869440 CAGCTCCTCCGCTCGCTG 62.869 72.222 0.00 0.00 43.10 5.18
361 362 4.441695 TTGCAGCTCCTCCGCTCG 62.442 66.667 0.00 0.00 38.41 5.03
362 363 2.817396 GTTGCAGCTCCTCCGCTC 60.817 66.667 0.00 0.00 38.41 5.03
363 364 2.964310 ATGTTGCAGCTCCTCCGCT 61.964 57.895 1.17 0.00 41.90 5.52
364 365 2.437359 ATGTTGCAGCTCCTCCGC 60.437 61.111 1.17 0.00 0.00 5.54
365 366 2.758089 GCATGTTGCAGCTCCTCCG 61.758 63.158 1.17 0.00 44.26 4.63
366 367 3.194719 GCATGTTGCAGCTCCTCC 58.805 61.111 1.17 0.00 44.26 4.30
375 376 0.164217 CATTTTGCGGTGCATGTTGC 59.836 50.000 0.00 0.00 45.29 4.17
376 377 0.164217 GCATTTTGCGGTGCATGTTG 59.836 50.000 0.00 0.00 38.76 3.33
377 378 2.531055 GCATTTTGCGGTGCATGTT 58.469 47.368 0.00 0.00 38.76 2.71
378 379 4.265282 GCATTTTGCGGTGCATGT 57.735 50.000 0.00 0.00 38.76 3.21
387 388 1.994779 CCAATGGTCGAAGCATTTTGC 59.005 47.619 8.80 0.00 43.00 3.68
388 389 1.994779 GCCAATGGTCGAAGCATTTTG 59.005 47.619 0.00 5.96 43.00 2.44
389 390 1.066929 GGCCAATGGTCGAAGCATTTT 60.067 47.619 0.00 0.00 43.00 1.82
390 391 0.532115 GGCCAATGGTCGAAGCATTT 59.468 50.000 0.00 0.00 43.00 2.32
391 392 0.611618 TGGCCAATGGTCGAAGCATT 60.612 50.000 0.61 6.50 46.06 3.56
392 393 0.611618 TTGGCCAATGGTCGAAGCAT 60.612 50.000 16.05 0.00 38.04 3.79
393 394 1.228398 TTGGCCAATGGTCGAAGCA 60.228 52.632 16.05 0.00 0.00 3.91
394 395 1.212751 GTTGGCCAATGGTCGAAGC 59.787 57.895 23.66 0.66 0.00 3.86
395 396 0.523072 CTGTTGGCCAATGGTCGAAG 59.477 55.000 23.66 7.19 0.00 3.79
396 397 0.109532 TCTGTTGGCCAATGGTCGAA 59.890 50.000 23.66 0.42 0.00 3.71
397 398 0.321564 CTCTGTTGGCCAATGGTCGA 60.322 55.000 23.66 12.37 0.00 4.20
398 399 1.926511 GCTCTGTTGGCCAATGGTCG 61.927 60.000 23.66 10.61 0.00 4.79
399 400 0.610232 AGCTCTGTTGGCCAATGGTC 60.610 55.000 23.66 9.33 0.00 4.02
400 401 0.698238 TAGCTCTGTTGGCCAATGGT 59.302 50.000 23.66 18.59 0.00 3.55
401 402 1.098050 GTAGCTCTGTTGGCCAATGG 58.902 55.000 23.66 17.07 0.00 3.16
402 403 1.825090 TGTAGCTCTGTTGGCCAATG 58.175 50.000 23.66 17.53 0.00 2.82
403 404 2.584835 TTGTAGCTCTGTTGGCCAAT 57.415 45.000 23.66 6.87 0.00 3.16
404 405 2.436417 GATTGTAGCTCTGTTGGCCAA 58.564 47.619 16.05 16.05 0.00 4.52
405 406 1.675714 CGATTGTAGCTCTGTTGGCCA 60.676 52.381 0.00 0.00 0.00 5.36
406 407 1.009829 CGATTGTAGCTCTGTTGGCC 58.990 55.000 0.00 0.00 0.00 5.36
407 408 1.661112 GACGATTGTAGCTCTGTTGGC 59.339 52.381 0.00 0.00 0.00 4.52
408 409 3.238108 AGACGATTGTAGCTCTGTTGG 57.762 47.619 0.00 0.00 0.00 3.77
409 410 6.036470 TCATAAGACGATTGTAGCTCTGTTG 58.964 40.000 0.00 0.00 0.00 3.33
410 411 6.208988 TCATAAGACGATTGTAGCTCTGTT 57.791 37.500 0.00 0.00 0.00 3.16
411 412 5.836821 TCATAAGACGATTGTAGCTCTGT 57.163 39.130 0.00 0.00 0.00 3.41
412 413 7.525688 TTTTCATAAGACGATTGTAGCTCTG 57.474 36.000 0.00 0.00 0.00 3.35
413 414 7.201565 GCTTTTTCATAAGACGATTGTAGCTCT 60.202 37.037 0.00 0.00 0.00 4.09
414 415 6.902417 GCTTTTTCATAAGACGATTGTAGCTC 59.098 38.462 0.00 0.00 0.00 4.09
415 416 6.595716 AGCTTTTTCATAAGACGATTGTAGCT 59.404 34.615 0.00 0.00 0.00 3.32
416 417 6.776094 AGCTTTTTCATAAGACGATTGTAGC 58.224 36.000 0.00 0.00 0.00 3.58
417 418 8.443160 TGAAGCTTTTTCATAAGACGATTGTAG 58.557 33.333 0.00 0.00 0.00 2.74
418 419 8.317891 TGAAGCTTTTTCATAAGACGATTGTA 57.682 30.769 0.00 0.00 0.00 2.41
419 420 7.202016 TGAAGCTTTTTCATAAGACGATTGT 57.798 32.000 0.00 0.00 0.00 2.71
420 421 7.201299 GCTTGAAGCTTTTTCATAAGACGATTG 60.201 37.037 10.44 0.00 38.45 2.67
421 422 6.803807 GCTTGAAGCTTTTTCATAAGACGATT 59.196 34.615 10.44 0.00 38.45 3.34
422 423 6.317857 GCTTGAAGCTTTTTCATAAGACGAT 58.682 36.000 10.44 0.00 38.45 3.73
423 424 5.614668 CGCTTGAAGCTTTTTCATAAGACGA 60.615 40.000 15.92 0.00 39.60 4.20
424 425 4.551126 CGCTTGAAGCTTTTTCATAAGACG 59.449 41.667 15.92 4.38 39.60 4.18
425 426 4.853743 CCGCTTGAAGCTTTTTCATAAGAC 59.146 41.667 15.92 0.00 39.60 3.01
426 427 4.759693 TCCGCTTGAAGCTTTTTCATAAGA 59.240 37.500 15.92 0.00 39.60 2.10
427 428 5.046910 TCCGCTTGAAGCTTTTTCATAAG 57.953 39.130 15.92 0.82 39.60 1.73
428 429 4.759693 TCTCCGCTTGAAGCTTTTTCATAA 59.240 37.500 15.92 0.00 39.60 1.90
429 430 4.154195 GTCTCCGCTTGAAGCTTTTTCATA 59.846 41.667 15.92 0.00 39.60 2.15
430 431 3.057946 GTCTCCGCTTGAAGCTTTTTCAT 60.058 43.478 15.92 0.00 39.60 2.57
431 432 2.290641 GTCTCCGCTTGAAGCTTTTTCA 59.709 45.455 15.92 0.00 39.60 2.69
432 433 2.290641 TGTCTCCGCTTGAAGCTTTTTC 59.709 45.455 15.92 3.91 39.60 2.29
433 434 2.291741 CTGTCTCCGCTTGAAGCTTTTT 59.708 45.455 15.92 0.00 39.60 1.94
434 435 1.876156 CTGTCTCCGCTTGAAGCTTTT 59.124 47.619 15.92 0.00 39.60 2.27
435 436 1.517242 CTGTCTCCGCTTGAAGCTTT 58.483 50.000 15.92 0.00 39.60 3.51
436 437 0.952984 GCTGTCTCCGCTTGAAGCTT 60.953 55.000 15.92 0.00 39.60 3.74
437 438 1.375268 GCTGTCTCCGCTTGAAGCT 60.375 57.895 15.92 0.00 39.60 3.74
438 439 2.734673 CGCTGTCTCCGCTTGAAGC 61.735 63.158 7.20 7.20 38.02 3.86
439 440 0.667487 TTCGCTGTCTCCGCTTGAAG 60.667 55.000 0.00 0.00 0.00 3.02
440 441 0.667487 CTTCGCTGTCTCCGCTTGAA 60.667 55.000 0.00 0.00 0.00 2.69
441 442 1.080501 CTTCGCTGTCTCCGCTTGA 60.081 57.895 0.00 0.00 0.00 3.02
442 443 2.734673 GCTTCGCTGTCTCCGCTTG 61.735 63.158 0.00 0.00 0.00 4.01
443 444 2.433318 GCTTCGCTGTCTCCGCTT 60.433 61.111 0.00 0.00 0.00 4.68
444 445 4.785512 CGCTTCGCTGTCTCCGCT 62.786 66.667 0.00 0.00 0.00 5.52
445 446 4.778415 TCGCTTCGCTGTCTCCGC 62.778 66.667 0.00 0.00 0.00 5.54
446 447 2.876645 GTCGCTTCGCTGTCTCCG 60.877 66.667 0.00 0.00 0.00 4.63
447 448 1.372997 TTGTCGCTTCGCTGTCTCC 60.373 57.895 0.00 0.00 0.00 3.71
448 449 1.618640 GGTTGTCGCTTCGCTGTCTC 61.619 60.000 0.00 0.00 0.00 3.36
449 450 1.664965 GGTTGTCGCTTCGCTGTCT 60.665 57.895 0.00 0.00 0.00 3.41
450 451 2.853914 GGTTGTCGCTTCGCTGTC 59.146 61.111 0.00 0.00 0.00 3.51
451 452 3.036084 CGGTTGTCGCTTCGCTGT 61.036 61.111 0.00 0.00 0.00 4.40
452 453 3.777925 CCGGTTGTCGCTTCGCTG 61.778 66.667 0.00 0.00 37.59 5.18
455 456 3.011760 GAAGCCGGTTGTCGCTTCG 62.012 63.158 1.90 0.00 39.82 3.79
456 457 0.389426 TAGAAGCCGGTTGTCGCTTC 60.389 55.000 12.66 12.66 44.43 3.86
457 458 0.034337 TTAGAAGCCGGTTGTCGCTT 59.966 50.000 1.90 0.00 37.71 4.68
458 459 0.034337 TTTAGAAGCCGGTTGTCGCT 59.966 50.000 1.90 0.00 37.59 4.93
459 460 0.869730 TTTTAGAAGCCGGTTGTCGC 59.130 50.000 1.90 0.00 37.59 5.19
511 512 2.110967 CATTGCCACTCAGCTCCCG 61.111 63.158 0.00 0.00 0.00 5.14
520 521 2.985282 CCCACGTGCATTGCCACT 60.985 61.111 10.91 0.00 33.60 4.00
521 522 4.054825 CCCCACGTGCATTGCCAC 62.055 66.667 10.91 3.87 0.00 5.01
536 537 1.802880 CGTGCACTCATAGTAGCACCC 60.803 57.143 16.19 5.95 43.59 4.61
543 544 1.514228 CGCGACGTGCACTCATAGT 60.514 57.895 16.19 4.47 46.97 2.12
544 545 2.849966 GCGCGACGTGCACTCATAG 61.850 63.158 27.26 0.68 46.97 2.23
545 546 1.984321 TAGCGCGACGTGCACTCATA 61.984 55.000 32.41 14.74 46.97 2.15
546 547 3.336715 TAGCGCGACGTGCACTCAT 62.337 57.895 32.41 15.76 46.97 2.90
547 548 4.032987 TAGCGCGACGTGCACTCA 62.033 61.111 32.41 13.54 46.97 3.41
548 549 3.533691 GTAGCGCGACGTGCACTC 61.534 66.667 32.41 18.67 46.97 3.51
568 570 2.202919 CATCGCCATCAGCCGTCA 60.203 61.111 0.00 0.00 38.78 4.35
602 604 1.603455 CCCCGTGGTTGCAACATCT 60.603 57.895 29.55 0.00 0.00 2.90
701 710 0.947180 TTTCACTGTTAGCGGCCGTC 60.947 55.000 28.70 19.09 0.00 4.79
712 721 5.556915 TCCTCCAATATTTCGTTTCACTGT 58.443 37.500 0.00 0.00 0.00 3.55
713 722 5.643777 ACTCCTCCAATATTTCGTTTCACTG 59.356 40.000 0.00 0.00 0.00 3.66
714 723 5.805728 ACTCCTCCAATATTTCGTTTCACT 58.194 37.500 0.00 0.00 0.00 3.41
761 779 0.249398 GTAGCCGTTGGATGGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
762 780 0.249120 TGTAGCCGTTGGATGGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
791 809 2.456577 TGTTCATCCGATCTCTGTCCA 58.543 47.619 0.00 0.00 0.00 4.02
833 851 3.012518 CGAGTTCTACTACGGAAGGGAA 58.987 50.000 0.00 0.00 0.00 3.97
896 928 3.199551 CGATTGGGTCGGTCGGTA 58.800 61.111 0.00 0.00 46.47 4.02
1044 1082 2.004583 CGTTCTTGATGTCGGCCTTA 57.995 50.000 0.00 0.00 0.00 2.69
1383 1427 3.965292 ATCGCGTTCTCGATTCTAGAA 57.035 42.857 7.82 7.82 45.81 2.10
1395 1439 4.206609 GTCACTTACCAGAATATCGCGTTC 59.793 45.833 5.77 2.38 0.00 3.95
1426 1470 4.449743 GCACGCGATTATATAGACCCAAAA 59.550 41.667 15.93 0.00 0.00 2.44
1463 1919 0.805322 CTCGTCTGATCCTGCAGCAC 60.805 60.000 8.66 2.04 35.86 4.40
1464 1920 1.253593 ACTCGTCTGATCCTGCAGCA 61.254 55.000 8.66 0.00 35.86 4.41
1505 1961 2.475200 GCACGGAATCAATTAGTGCC 57.525 50.000 17.80 6.86 43.00 5.01
1520 1976 2.743752 CCGTCAGCATTCAGGCACG 61.744 63.158 0.00 0.00 34.24 5.34
1538 1994 7.986085 ACATAAATAGGTTATCATGGTGAGC 57.014 36.000 0.00 0.00 29.38 4.26
1557 2018 1.063321 CAAATGCGCTGCGGTACATAA 59.937 47.619 24.61 0.00 0.00 1.90
1666 2127 0.318441 TCTTCAGGAACGCTGTCCAG 59.682 55.000 5.43 0.00 40.48 3.86
1667 2128 0.033504 GTCTTCAGGAACGCTGTCCA 59.966 55.000 5.43 0.00 40.48 4.02
1746 2207 4.504461 GCCTATATATGCACGCATGTACTC 59.496 45.833 14.70 0.14 37.82 2.59
1748 2209 3.555956 GGCCTATATATGCACGCATGTAC 59.444 47.826 14.70 0.97 37.82 2.90
1749 2210 3.736740 CGGCCTATATATGCACGCATGTA 60.737 47.826 14.70 12.39 37.82 2.29
1750 2211 2.632377 GGCCTATATATGCACGCATGT 58.368 47.619 14.70 10.48 37.82 3.21
1751 2212 1.594397 CGGCCTATATATGCACGCATG 59.406 52.381 14.70 0.00 37.82 4.06
1752 2213 1.473257 CCGGCCTATATATGCACGCAT 60.473 52.381 9.82 9.82 40.19 4.73
1753 2214 0.108377 CCGGCCTATATATGCACGCA 60.108 55.000 11.48 0.00 0.00 5.24
1754 2215 1.429148 GCCGGCCTATATATGCACGC 61.429 60.000 18.11 8.14 0.00 5.34
1755 2216 0.810031 GGCCGGCCTATATATGCACG 60.810 60.000 38.76 11.35 0.00 5.34
1756 2217 0.810031 CGGCCGGCCTATATATGCAC 60.810 60.000 41.01 12.39 0.00 4.57
1757 2218 1.520192 CGGCCGGCCTATATATGCA 59.480 57.895 41.01 0.00 0.00 3.96
1758 2219 1.227556 CCGGCCGGCCTATATATGC 60.228 63.158 41.01 13.75 0.00 3.14
1819 2280 7.869429 ACACAACATTACCTGTACTTGTACTAC 59.131 37.037 11.53 0.00 36.98 2.73
1829 2450 4.508492 CACAACGACACAACATTACCTGTA 59.492 41.667 0.00 0.00 36.98 2.74
1900 2522 2.224793 TGTCCTTCTCTCTCGACTCCAA 60.225 50.000 0.00 0.00 0.00 3.53
1901 2523 1.351350 TGTCCTTCTCTCTCGACTCCA 59.649 52.381 0.00 0.00 0.00 3.86
1961 2583 1.065926 TGTTCCAGCTGTATGCCTGAG 60.066 52.381 13.81 0.00 44.23 3.35
1976 2598 4.303282 GTCTCTGAAGTCTGAACTGTTCC 58.697 47.826 17.26 2.90 35.36 3.62
1997 2619 0.595095 GTCGTCTTGACGTGTAGGGT 59.405 55.000 20.30 0.00 37.96 4.34
2020 2646 0.518636 CCACACGAAAGACATGCCAG 59.481 55.000 0.00 0.00 0.00 4.85
2054 2680 7.324388 TCCCTCATCAGAAAGGTAAAGTAAA 57.676 36.000 2.37 0.00 0.00 2.01
2069 2695 1.689233 CCCTCGGGTTCCCTCATCA 60.689 63.158 6.31 0.00 0.00 3.07
2070 2696 2.444256 CCCCTCGGGTTCCCTCATC 61.444 68.421 6.31 0.00 38.25 2.92
2071 2697 2.271493 ATCCCCTCGGGTTCCCTCAT 62.271 60.000 6.31 0.00 44.74 2.90
2118 2744 5.407691 TGTTACAACGCACGGATAATTTGTA 59.592 36.000 0.00 0.00 0.00 2.41
2120 2746 4.713806 TGTTACAACGCACGGATAATTTG 58.286 39.130 0.00 0.00 0.00 2.32
2170 2796 1.765314 AGTCCAGTCAGCTTCACAACT 59.235 47.619 0.00 0.00 0.00 3.16
2183 2809 8.957466 GGCTTCTTTTACAATTAATAGTCCAGT 58.043 33.333 0.00 0.00 0.00 4.00
2192 2819 9.567848 GATGAAATCGGCTTCTTTTACAATTAA 57.432 29.630 0.00 0.00 31.13 1.40
2218 2845 2.118683 CAACAACCATTTGACGCTGTG 58.881 47.619 0.00 0.00 36.48 3.66
2219 2846 1.535860 GCAACAACCATTTGACGCTGT 60.536 47.619 0.00 0.00 36.48 4.40
2269 3190 3.429492 TGCAAGGGTATTTTGATGCTGA 58.571 40.909 0.00 0.00 34.97 4.26
2270 3191 3.872511 TGCAAGGGTATTTTGATGCTG 57.127 42.857 0.00 0.00 34.97 4.41
2271 3192 4.284178 AGATGCAAGGGTATTTTGATGCT 58.716 39.130 0.00 0.00 34.97 3.79
2272 3193 4.660789 AGATGCAAGGGTATTTTGATGC 57.339 40.909 0.00 0.00 0.00 3.91
2273 3194 7.338800 AGTTAGATGCAAGGGTATTTTGATG 57.661 36.000 0.00 0.00 0.00 3.07
2274 3195 8.275040 ACTAGTTAGATGCAAGGGTATTTTGAT 58.725 33.333 0.00 0.00 0.00 2.57
2276 3197 7.865706 ACTAGTTAGATGCAAGGGTATTTTG 57.134 36.000 0.00 0.00 0.00 2.44
2515 3510 4.641777 GCTGTCAGCCTTTTGCAC 57.358 55.556 14.27 0.00 44.83 4.57
2525 3520 2.507992 CGCGAGAAGGGCTGTCAG 60.508 66.667 0.00 0.00 0.00 3.51
2540 3535 0.458716 GAGACTGCAACTAGGGACGC 60.459 60.000 0.00 0.00 0.00 5.19
2543 3538 1.272490 CAACGAGACTGCAACTAGGGA 59.728 52.381 0.00 0.00 0.00 4.20
2559 3554 0.234625 ACAACAGCATGCGTACAACG 59.765 50.000 13.01 1.04 45.88 4.10
2566 3561 0.590682 TTGGTACACAACAGCATGCG 59.409 50.000 13.01 9.99 37.83 4.73
2581 3576 2.965147 CCACTTTTTGTCCATCCTTGGT 59.035 45.455 0.00 0.00 44.06 3.67
2582 3577 2.965147 ACCACTTTTTGTCCATCCTTGG 59.035 45.455 0.00 0.00 45.15 3.61
2584 3579 2.884639 CGACCACTTTTTGTCCATCCTT 59.115 45.455 0.00 0.00 0.00 3.36
2588 3583 2.227194 GGACGACCACTTTTTGTCCAT 58.773 47.619 0.00 0.00 44.36 3.41
2594 3589 2.294979 GAACTGGGACGACCACTTTTT 58.705 47.619 6.20 0.00 46.80 1.94
2595 3590 1.476291 GGAACTGGGACGACCACTTTT 60.476 52.381 6.20 0.00 46.80 2.27
2596 3591 0.108019 GGAACTGGGACGACCACTTT 59.892 55.000 6.20 0.13 46.80 2.66
2597 3592 1.752833 GGAACTGGGACGACCACTT 59.247 57.895 6.20 1.30 46.80 3.16
2599 3594 2.048503 CGGAACTGGGACGACCAC 60.049 66.667 6.20 0.00 46.80 4.16
2601 3596 2.048503 CACGGAACTGGGACGACC 60.049 66.667 0.00 0.00 40.81 4.79
2602 3597 1.372623 GACACGGAACTGGGACGAC 60.373 63.158 0.00 0.00 0.00 4.34
2603 3598 2.911484 CGACACGGAACTGGGACGA 61.911 63.158 2.06 0.00 0.00 4.20
2604 3599 2.430244 CGACACGGAACTGGGACG 60.430 66.667 0.00 0.00 0.00 4.79
2605 3600 1.080705 CTCGACACGGAACTGGGAC 60.081 63.158 0.00 0.00 0.00 4.46
2606 3601 2.273179 CCTCGACACGGAACTGGGA 61.273 63.158 0.00 0.00 0.00 4.37
2607 3602 2.261671 CCTCGACACGGAACTGGG 59.738 66.667 0.00 0.00 0.00 4.45
2618 3627 1.070786 TTGCAAGTCCACCCTCGAC 59.929 57.895 0.00 0.00 0.00 4.20
2620 3629 1.071471 AGTTGCAAGTCCACCCTCG 59.929 57.895 0.00 0.00 0.00 4.63
2660 3720 2.353889 GTCTATCCTCGACACGCAACTA 59.646 50.000 0.00 0.00 0.00 2.24
2664 3724 1.132453 CAAGTCTATCCTCGACACGCA 59.868 52.381 0.00 0.00 33.89 5.24
2730 3790 3.391665 CTCGATGTGCTCCACCCCC 62.392 68.421 0.00 0.00 32.73 5.40
2745 3805 3.123620 GCACTGCCTTCCAGCTCG 61.124 66.667 0.00 0.00 45.78 5.03
2759 3819 3.027170 CTCGCCACAACCATCGCAC 62.027 63.158 0.00 0.00 0.00 5.34
2760 3820 2.741985 CTCGCCACAACCATCGCA 60.742 61.111 0.00 0.00 0.00 5.10
2785 3845 2.888447 ATCATAGCAGAGGCCGCCC 61.888 63.158 5.55 0.00 42.56 6.13
2788 3848 1.226686 GCACATCATAGCAGAGGCCG 61.227 60.000 0.00 0.00 42.56 6.13
2808 3868 2.271800 GACTCCATCACCGACATGTTC 58.728 52.381 0.00 0.00 0.00 3.18
2809 3869 1.404181 CGACTCCATCACCGACATGTT 60.404 52.381 0.00 0.00 0.00 2.71
2815 3875 0.683179 ATCACCGACTCCATCACCGA 60.683 55.000 0.00 0.00 0.00 4.69
2818 3878 0.811616 GCCATCACCGACTCCATCAC 60.812 60.000 0.00 0.00 0.00 3.06
2825 3885 4.498520 CGCTCGCCATCACCGACT 62.499 66.667 0.00 0.00 0.00 4.18
2854 3914 3.871395 CCCTCCTGCTAGCCCTGC 61.871 72.222 13.29 0.00 0.00 4.85
2889 3949 0.890683 CTTGGCACCCTCCATTTCAC 59.109 55.000 0.00 0.00 35.77 3.18
2899 3959 4.966787 TTGTCCGGCTTGGCACCC 62.967 66.667 0.00 0.00 37.80 4.61
2910 3970 3.036084 AGCACGCGTCTTTGTCCG 61.036 61.111 9.86 0.00 0.00 4.79
2911 3971 2.551270 CAGCACGCGTCTTTGTCC 59.449 61.111 9.86 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.