Multiple sequence alignment - TraesCS6B01G111900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G111900 chr6B 100.000 3331 0 0 1 3331 93778848 93782178 0.000000e+00 6152.0
1 TraesCS6B01G111900 chr6B 100.000 2418 0 0 3702 6119 93782549 93784966 0.000000e+00 4466.0
2 TraesCS6B01G111900 chrUn 93.994 2864 123 19 480 3314 19193929 19191086 0.000000e+00 4290.0
3 TraesCS6B01G111900 chrUn 93.557 1785 103 10 3846 5623 19189923 19188144 0.000000e+00 2649.0
4 TraesCS6B01G111900 chr6A 91.252 2252 155 25 3879 6117 57759732 57761954 0.000000e+00 3029.0
5 TraesCS6B01G111900 chr6A 94.035 1995 81 20 688 2671 57756276 57758243 0.000000e+00 2990.0
6 TraesCS6B01G111900 chr6A 91.018 501 34 5 2842 3331 57758674 57759174 0.000000e+00 665.0
7 TraesCS6B01G111900 chr6A 97.093 172 5 0 2663 2834 57758350 57758521 2.160000e-74 291.0
8 TraesCS6B01G111900 chr6A 88.732 71 2 2 607 677 57756229 57756293 1.410000e-11 82.4
9 TraesCS6B01G111900 chr7D 87.567 748 86 5 5376 6117 382008469 382009215 0.000000e+00 859.0
10 TraesCS6B01G111900 chr7D 87.398 738 84 7 5376 6107 601300814 601301548 0.000000e+00 839.0
11 TraesCS6B01G111900 chr7D 86.933 750 91 5 5374 6117 307059210 307059958 0.000000e+00 835.0
12 TraesCS6B01G111900 chr2D 87.651 745 85 5 5379 6117 635042950 635042207 0.000000e+00 859.0
13 TraesCS6B01G111900 chr2D 100.000 29 0 0 3886 3914 98269109 98269081 3.000000e-03 54.7
14 TraesCS6B01G111900 chr4D 87.248 745 88 5 5379 6117 123373480 123372737 0.000000e+00 843.0
15 TraesCS6B01G111900 chr4D 87.114 745 89 5 5379 6117 123584271 123583528 0.000000e+00 837.0
16 TraesCS6B01G111900 chr4D 88.571 420 43 2 2368 2787 107746714 107747128 7.080000e-139 505.0
17 TraesCS6B01G111900 chr4D 82.682 179 26 3 164 342 11864564 11864391 2.950000e-33 154.0
18 TraesCS6B01G111900 chr4A 87.166 748 89 5 5376 6117 67549213 67549959 0.000000e+00 843.0
19 TraesCS6B01G111900 chr4A 87.027 555 64 6 2783 3331 468410591 468410039 2.420000e-173 619.0
20 TraesCS6B01G111900 chr4A 87.857 420 37 5 2368 2787 468412685 468412280 1.190000e-131 481.0
21 TraesCS6B01G111900 chr6D 86.800 750 92 5 5374 6117 83949682 83950430 0.000000e+00 830.0
22 TraesCS6B01G111900 chr6D 77.256 277 33 22 2370 2634 48116875 48116617 1.070000e-27 135.0
23 TraesCS6B01G111900 chr4B 86.667 420 41 10 2368 2786 168777813 168777408 9.350000e-123 451.0
24 TraesCS6B01G111900 chr7B 81.517 211 32 4 164 372 641684177 641684382 3.790000e-37 167.0
25 TraesCS6B01G111900 chr7B 77.654 179 32 6 258 436 538896360 538896190 1.090000e-17 102.0
26 TraesCS6B01G111900 chr1B 87.879 132 14 2 240 370 659331739 659331869 2.950000e-33 154.0
27 TraesCS6B01G111900 chr7A 79.358 218 33 10 221 435 63110327 63110119 6.390000e-30 143.0
28 TraesCS6B01G111900 chr7A 100.000 28 0 0 3887 3914 112353067 112353094 1.100000e-02 52.8
29 TraesCS6B01G111900 chr5D 75.746 268 36 21 2370 2625 155410071 155410321 2.330000e-19 108.0
30 TraesCS6B01G111900 chr5D 100.000 28 0 0 3887 3914 459929842 459929815 1.100000e-02 52.8
31 TraesCS6B01G111900 chr3D 82.292 96 13 4 266 359 32328468 32328375 5.080000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G111900 chr6B 93778848 93784966 6118 False 5309.00 6152 100.0000 1 6119 2 chr6B.!!$F1 6118
1 TraesCS6B01G111900 chrUn 19188144 19193929 5785 True 3469.50 4290 93.7755 480 5623 2 chrUn.!!$R1 5143
2 TraesCS6B01G111900 chr6A 57756229 57761954 5725 False 1411.48 3029 92.4260 607 6117 5 chr6A.!!$F1 5510
3 TraesCS6B01G111900 chr7D 382008469 382009215 746 False 859.00 859 87.5670 5376 6117 1 chr7D.!!$F2 741
4 TraesCS6B01G111900 chr7D 601300814 601301548 734 False 839.00 839 87.3980 5376 6107 1 chr7D.!!$F3 731
5 TraesCS6B01G111900 chr7D 307059210 307059958 748 False 835.00 835 86.9330 5374 6117 1 chr7D.!!$F1 743
6 TraesCS6B01G111900 chr2D 635042207 635042950 743 True 859.00 859 87.6510 5379 6117 1 chr2D.!!$R2 738
7 TraesCS6B01G111900 chr4D 123372737 123373480 743 True 843.00 843 87.2480 5379 6117 1 chr4D.!!$R2 738
8 TraesCS6B01G111900 chr4D 123583528 123584271 743 True 837.00 837 87.1140 5379 6117 1 chr4D.!!$R3 738
9 TraesCS6B01G111900 chr4A 67549213 67549959 746 False 843.00 843 87.1660 5376 6117 1 chr4A.!!$F1 741
10 TraesCS6B01G111900 chr4A 468410039 468412685 2646 True 550.00 619 87.4420 2368 3331 2 chr4A.!!$R1 963
11 TraesCS6B01G111900 chr6D 83949682 83950430 748 False 830.00 830 86.8000 5374 6117 1 chr6D.!!$F1 743

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
224 225 0.043310 GTGCGCCGCGTAATTTAGAG 60.043 55.000 15.34 0.00 0.00 2.43 F
225 226 0.179132 TGCGCCGCGTAATTTAGAGA 60.179 50.000 15.34 0.00 0.00 3.10 F
226 227 0.925466 GCGCCGCGTAATTTAGAGAA 59.075 50.000 15.34 0.00 0.00 2.87 F
227 228 1.071436 GCGCCGCGTAATTTAGAGAAG 60.071 52.381 15.34 0.00 0.00 2.85 F
743 745 1.301009 GATCGCCCGAATCCCTGAC 60.301 63.158 0.00 0.00 0.00 3.51 F
835 849 1.414550 TCCAACGTTGTCTCATCCACA 59.585 47.619 25.63 0.00 0.00 4.17 F
872 887 1.601903 ACCTCGACGTACGTAACACAA 59.398 47.619 22.87 2.49 43.13 3.33 F
2555 2583 0.984230 CTGCCTGTCCTTCCTTGGTA 59.016 55.000 0.00 0.00 0.00 3.25 F
4289 7242 0.467844 AAGATGCCAGGTGTGTGCAA 60.468 50.000 0.00 0.00 34.72 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1581 1596 1.064654 GCCACCTTCTTGATGCGATTC 59.935 52.381 0.00 0.00 0.00 2.52 R
1656 1671 1.524482 GAGGCTGGTGGTGATCTCC 59.476 63.158 6.88 6.88 0.00 3.71 R
2056 2071 3.151022 GCCGTCCTCCTCCTCCTG 61.151 72.222 0.00 0.00 0.00 3.86 R
2148 2166 4.292178 CTGGCCTCCGAGATCCGC 62.292 72.222 3.32 0.00 36.84 5.54 R
2374 2400 0.179121 TACTCCATAGCAACGCACGG 60.179 55.000 0.00 0.00 0.00 4.94 R
2522 2550 0.608130 AGGCAGCGATGTTCAGTACA 59.392 50.000 1.22 0.00 41.97 2.90 R
2869 4849 2.828520 TGTCAAGGCAAAGGTTGAAACA 59.171 40.909 0.00 0.00 34.52 2.83 R
4357 7310 0.038599 TCACAGGGCAGCATCAATGT 59.961 50.000 0.00 0.00 0.00 2.71 R
5382 8345 0.179084 GGCTACCATTCTAGCACGCA 60.179 55.000 0.93 0.00 40.96 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.881937 AATCTTACGGCGGACTACTTT 57.118 42.857 13.24 0.00 0.00 2.66
21 22 3.881937 ATCTTACGGCGGACTACTTTT 57.118 42.857 13.24 0.00 0.00 2.27
22 23 3.221964 TCTTACGGCGGACTACTTTTC 57.778 47.619 13.24 0.00 0.00 2.29
23 24 2.557924 TCTTACGGCGGACTACTTTTCA 59.442 45.455 13.24 0.00 0.00 2.69
24 25 3.005684 TCTTACGGCGGACTACTTTTCAA 59.994 43.478 13.24 0.00 0.00 2.69
25 26 2.243602 ACGGCGGACTACTTTTCAAA 57.756 45.000 13.24 0.00 0.00 2.69
26 27 2.774687 ACGGCGGACTACTTTTCAAAT 58.225 42.857 13.24 0.00 0.00 2.32
27 28 2.740447 ACGGCGGACTACTTTTCAAATC 59.260 45.455 13.24 0.00 0.00 2.17
28 29 3.000727 CGGCGGACTACTTTTCAAATCT 58.999 45.455 0.00 0.00 0.00 2.40
29 30 3.181520 CGGCGGACTACTTTTCAAATCTG 60.182 47.826 0.00 0.00 0.00 2.90
30 31 4.000988 GGCGGACTACTTTTCAAATCTGA 58.999 43.478 0.00 0.00 0.00 3.27
31 32 4.142881 GGCGGACTACTTTTCAAATCTGAC 60.143 45.833 0.00 0.00 0.00 3.51
32 33 4.434330 GCGGACTACTTTTCAAATCTGACG 60.434 45.833 0.00 0.00 0.00 4.35
33 34 4.684703 CGGACTACTTTTCAAATCTGACGT 59.315 41.667 0.00 0.00 0.00 4.34
34 35 5.388475 CGGACTACTTTTCAAATCTGACGTG 60.388 44.000 0.00 0.00 0.00 4.49
35 36 5.107065 GGACTACTTTTCAAATCTGACGTGG 60.107 44.000 0.00 0.00 0.00 4.94
36 37 5.607477 ACTACTTTTCAAATCTGACGTGGA 58.393 37.500 0.00 0.00 0.00 4.02
37 38 6.231211 ACTACTTTTCAAATCTGACGTGGAT 58.769 36.000 0.00 0.00 0.00 3.41
38 39 5.613358 ACTTTTCAAATCTGACGTGGATC 57.387 39.130 0.00 0.00 0.00 3.36
39 40 4.152402 ACTTTTCAAATCTGACGTGGATCG 59.848 41.667 0.00 0.00 46.00 3.69
40 41 2.293677 TCAAATCTGACGTGGATCGG 57.706 50.000 0.00 0.00 44.69 4.18
56 57 2.194326 GGCCCTGCCTTGAGATCC 59.806 66.667 0.00 0.00 46.69 3.36
57 58 2.683465 GGCCCTGCCTTGAGATCCA 61.683 63.158 0.00 0.00 46.69 3.41
58 59 1.535685 GCCCTGCCTTGAGATCCAT 59.464 57.895 0.00 0.00 0.00 3.41
59 60 0.822532 GCCCTGCCTTGAGATCCATG 60.823 60.000 0.00 0.00 0.00 3.66
60 61 0.549950 CCCTGCCTTGAGATCCATGT 59.450 55.000 0.00 0.00 0.00 3.21
61 62 1.770658 CCCTGCCTTGAGATCCATGTA 59.229 52.381 0.00 0.00 0.00 2.29
62 63 2.173356 CCCTGCCTTGAGATCCATGTAA 59.827 50.000 0.00 0.00 0.00 2.41
63 64 3.209410 CCTGCCTTGAGATCCATGTAAC 58.791 50.000 0.00 0.00 0.00 2.50
64 65 3.370846 CCTGCCTTGAGATCCATGTAACA 60.371 47.826 0.00 0.00 0.00 2.41
65 66 4.458397 CTGCCTTGAGATCCATGTAACAT 58.542 43.478 0.00 0.00 0.00 2.71
66 67 4.858850 TGCCTTGAGATCCATGTAACATT 58.141 39.130 0.00 0.00 0.00 2.71
67 68 4.641541 TGCCTTGAGATCCATGTAACATTG 59.358 41.667 0.00 0.00 0.00 2.82
68 69 4.037208 GCCTTGAGATCCATGTAACATTGG 59.963 45.833 0.00 0.00 0.00 3.16
69 70 4.581824 CCTTGAGATCCATGTAACATTGGG 59.418 45.833 0.00 0.00 33.62 4.12
70 71 4.169059 TGAGATCCATGTAACATTGGGG 57.831 45.455 0.00 0.00 33.62 4.96
71 72 3.785325 TGAGATCCATGTAACATTGGGGA 59.215 43.478 0.00 0.00 33.62 4.81
72 73 4.141413 TGAGATCCATGTAACATTGGGGAG 60.141 45.833 0.00 0.00 33.62 4.30
73 74 3.139025 AGATCCATGTAACATTGGGGAGG 59.861 47.826 0.00 0.00 33.62 4.30
74 75 1.568597 TCCATGTAACATTGGGGAGGG 59.431 52.381 0.00 0.00 33.62 4.30
75 76 1.402787 CATGTAACATTGGGGAGGGC 58.597 55.000 0.00 0.00 0.00 5.19
76 77 0.106719 ATGTAACATTGGGGAGGGCG 60.107 55.000 0.00 0.00 0.00 6.13
77 78 1.301954 GTAACATTGGGGAGGGCGT 59.698 57.895 0.00 0.00 0.00 5.68
78 79 0.746923 GTAACATTGGGGAGGGCGTC 60.747 60.000 0.00 0.00 0.00 5.19
79 80 1.917336 TAACATTGGGGAGGGCGTCC 61.917 60.000 17.79 17.79 46.10 4.79
90 91 4.899239 GGCGTCCGCTGGGAGATG 62.899 72.222 11.82 0.00 44.97 2.90
92 93 4.899239 CGTCCGCTGGGAGATGCC 62.899 72.222 0.00 0.00 44.97 4.40
93 94 3.785859 GTCCGCTGGGAGATGCCA 61.786 66.667 0.00 0.00 44.97 4.92
94 95 3.008517 TCCGCTGGGAGATGCCAA 61.009 61.111 0.00 0.00 37.43 4.52
95 96 2.045045 CCGCTGGGAGATGCCAAA 60.045 61.111 0.00 0.00 38.95 3.28
96 97 1.454479 CCGCTGGGAGATGCCAAAT 60.454 57.895 0.00 0.00 38.95 2.32
97 98 0.179020 CCGCTGGGAGATGCCAAATA 60.179 55.000 0.00 0.00 38.95 1.40
98 99 1.546323 CCGCTGGGAGATGCCAAATAT 60.546 52.381 0.00 0.00 38.95 1.28
99 100 1.808945 CGCTGGGAGATGCCAAATATC 59.191 52.381 0.00 0.00 38.95 1.63
100 101 2.551721 CGCTGGGAGATGCCAAATATCT 60.552 50.000 0.00 0.00 38.95 1.98
101 102 2.818432 GCTGGGAGATGCCAAATATCTG 59.182 50.000 0.00 0.00 38.95 2.90
102 103 3.497405 GCTGGGAGATGCCAAATATCTGA 60.497 47.826 0.00 0.00 38.95 3.27
103 104 4.070716 CTGGGAGATGCCAAATATCTGAC 58.929 47.826 0.00 0.00 38.95 3.51
104 105 3.070018 GGGAGATGCCAAATATCTGACG 58.930 50.000 0.00 0.00 38.95 4.35
105 106 3.070018 GGAGATGCCAAATATCTGACGG 58.930 50.000 0.00 0.00 35.14 4.79
106 107 3.244215 GGAGATGCCAAATATCTGACGGA 60.244 47.826 0.00 0.00 35.14 4.69
107 108 3.733337 AGATGCCAAATATCTGACGGAC 58.267 45.455 0.00 0.00 33.79 4.79
108 109 1.934589 TGCCAAATATCTGACGGACG 58.065 50.000 0.00 0.00 0.00 4.79
109 110 0.582005 GCCAAATATCTGACGGACGC 59.418 55.000 0.00 0.00 0.00 5.19
110 111 0.852777 CCAAATATCTGACGGACGCG 59.147 55.000 3.53 3.53 0.00 6.01
111 112 1.535226 CCAAATATCTGACGGACGCGA 60.535 52.381 15.93 0.00 0.00 5.87
112 113 1.781429 CAAATATCTGACGGACGCGAG 59.219 52.381 15.93 6.25 0.00 5.03
113 114 1.306148 AATATCTGACGGACGCGAGA 58.694 50.000 15.93 3.75 0.00 4.04
114 115 1.524848 ATATCTGACGGACGCGAGAT 58.475 50.000 15.93 12.25 0.00 2.75
115 116 2.159327 TATCTGACGGACGCGAGATA 57.841 50.000 15.93 11.11 0.00 1.98
116 117 1.306148 ATCTGACGGACGCGAGATAA 58.694 50.000 15.93 0.00 0.00 1.75
117 118 0.376152 TCTGACGGACGCGAGATAAC 59.624 55.000 15.93 0.00 0.00 1.89
118 119 0.098200 CTGACGGACGCGAGATAACA 59.902 55.000 15.93 4.80 0.00 2.41
119 120 0.736636 TGACGGACGCGAGATAACAT 59.263 50.000 15.93 0.00 0.00 2.71
120 121 1.133598 TGACGGACGCGAGATAACATT 59.866 47.619 15.93 0.00 0.00 2.71
121 122 2.190981 GACGGACGCGAGATAACATTT 58.809 47.619 15.93 0.00 0.00 2.32
122 123 2.601763 GACGGACGCGAGATAACATTTT 59.398 45.455 15.93 0.00 0.00 1.82
123 124 2.997986 ACGGACGCGAGATAACATTTTT 59.002 40.909 15.93 0.00 0.00 1.94
124 125 3.061697 ACGGACGCGAGATAACATTTTTC 59.938 43.478 15.93 0.00 0.00 2.29
125 126 3.306166 CGGACGCGAGATAACATTTTTCT 59.694 43.478 15.93 0.00 0.00 2.52
126 127 4.501559 CGGACGCGAGATAACATTTTTCTA 59.498 41.667 15.93 0.00 0.00 2.10
127 128 5.005012 CGGACGCGAGATAACATTTTTCTAA 59.995 40.000 15.93 0.00 0.00 2.10
128 129 6.454583 CGGACGCGAGATAACATTTTTCTAAA 60.455 38.462 15.93 0.00 0.00 1.85
129 130 7.238571 GGACGCGAGATAACATTTTTCTAAAA 58.761 34.615 15.93 0.00 0.00 1.52
130 131 7.747357 GGACGCGAGATAACATTTTTCTAAAAA 59.253 33.333 15.93 3.29 41.59 1.94
166 167 9.787532 CTTCTTTTAATTAAGAAATGATCGGCA 57.212 29.630 5.21 0.00 42.01 5.69
168 169 9.734620 TCTTTTAATTAAGAAATGATCGGCATG 57.265 29.630 0.00 0.00 37.28 4.06
169 170 9.520204 CTTTTAATTAAGAAATGATCGGCATGT 57.480 29.630 0.00 0.00 37.28 3.21
171 172 9.944663 TTTAATTAAGAAATGATCGGCATGTAC 57.055 29.630 0.00 0.00 37.28 2.90
172 173 7.566760 AATTAAGAAATGATCGGCATGTACA 57.433 32.000 0.00 0.00 37.28 2.90
173 174 6.993786 TTAAGAAATGATCGGCATGTACAA 57.006 33.333 0.00 0.00 37.28 2.41
174 175 7.566760 TTAAGAAATGATCGGCATGTACAAT 57.433 32.000 0.00 0.00 37.28 2.71
175 176 5.428496 AGAAATGATCGGCATGTACAATG 57.572 39.130 0.00 0.12 37.28 2.82
176 177 4.276678 AGAAATGATCGGCATGTACAATGG 59.723 41.667 0.00 0.00 37.28 3.16
177 178 2.708216 TGATCGGCATGTACAATGGT 57.292 45.000 0.00 0.00 0.00 3.55
178 179 2.997980 TGATCGGCATGTACAATGGTT 58.002 42.857 0.00 0.00 0.00 3.67
179 180 2.682352 TGATCGGCATGTACAATGGTTG 59.318 45.455 0.00 0.00 0.00 3.77
180 181 1.458398 TCGGCATGTACAATGGTTGG 58.542 50.000 0.00 0.00 34.12 3.77
181 182 1.173043 CGGCATGTACAATGGTTGGT 58.827 50.000 0.00 0.00 34.12 3.67
182 183 2.027100 TCGGCATGTACAATGGTTGGTA 60.027 45.455 0.00 0.00 34.12 3.25
183 184 2.750166 CGGCATGTACAATGGTTGGTAA 59.250 45.455 0.00 0.00 34.12 2.85
184 185 3.181501 CGGCATGTACAATGGTTGGTAAG 60.182 47.826 0.00 0.00 34.12 2.34
185 186 3.130340 GGCATGTACAATGGTTGGTAAGG 59.870 47.826 0.00 0.00 34.12 2.69
186 187 3.428862 GCATGTACAATGGTTGGTAAGGC 60.429 47.826 0.00 0.00 34.12 4.35
187 188 3.799432 TGTACAATGGTTGGTAAGGCT 57.201 42.857 0.00 0.00 34.12 4.58
188 189 3.417101 TGTACAATGGTTGGTAAGGCTG 58.583 45.455 0.00 0.00 34.12 4.85
189 190 2.675658 ACAATGGTTGGTAAGGCTGT 57.324 45.000 0.00 0.00 34.12 4.40
190 191 2.957474 ACAATGGTTGGTAAGGCTGTT 58.043 42.857 0.00 0.00 34.12 3.16
191 192 3.304829 ACAATGGTTGGTAAGGCTGTTT 58.695 40.909 0.00 0.00 34.12 2.83
192 193 3.709141 ACAATGGTTGGTAAGGCTGTTTT 59.291 39.130 0.00 0.00 34.12 2.43
193 194 4.057432 CAATGGTTGGTAAGGCTGTTTTG 58.943 43.478 0.00 0.00 0.00 2.44
194 195 2.741145 TGGTTGGTAAGGCTGTTTTGT 58.259 42.857 0.00 0.00 0.00 2.83
195 196 3.899726 TGGTTGGTAAGGCTGTTTTGTA 58.100 40.909 0.00 0.00 0.00 2.41
196 197 3.633065 TGGTTGGTAAGGCTGTTTTGTAC 59.367 43.478 0.00 0.00 0.00 2.90
197 198 3.304190 GGTTGGTAAGGCTGTTTTGTACG 60.304 47.826 0.00 0.00 0.00 3.67
198 199 3.472283 TGGTAAGGCTGTTTTGTACGA 57.528 42.857 0.00 0.00 0.00 3.43
199 200 4.010667 TGGTAAGGCTGTTTTGTACGAT 57.989 40.909 0.00 0.00 0.00 3.73
200 201 3.998341 TGGTAAGGCTGTTTTGTACGATC 59.002 43.478 0.00 0.00 0.00 3.69
201 202 4.251268 GGTAAGGCTGTTTTGTACGATCT 58.749 43.478 0.00 0.00 0.00 2.75
202 203 4.694037 GGTAAGGCTGTTTTGTACGATCTT 59.306 41.667 0.00 0.00 0.00 2.40
203 204 5.870978 GGTAAGGCTGTTTTGTACGATCTTA 59.129 40.000 0.00 0.00 0.00 2.10
204 205 6.537660 GGTAAGGCTGTTTTGTACGATCTTAT 59.462 38.462 0.00 0.00 0.00 1.73
205 206 6.422776 AAGGCTGTTTTGTACGATCTTATG 57.577 37.500 0.00 0.00 0.00 1.90
206 207 5.488341 AGGCTGTTTTGTACGATCTTATGT 58.512 37.500 0.00 0.00 0.00 2.29
207 208 5.351465 AGGCTGTTTTGTACGATCTTATGTG 59.649 40.000 0.00 0.00 0.00 3.21
208 209 5.022021 GCTGTTTTGTACGATCTTATGTGC 58.978 41.667 0.00 0.00 0.00 4.57
209 210 5.198116 TGTTTTGTACGATCTTATGTGCG 57.802 39.130 0.00 0.00 0.00 5.34
210 211 3.918258 TTTGTACGATCTTATGTGCGC 57.082 42.857 0.00 0.00 0.00 6.09
211 212 1.847818 TGTACGATCTTATGTGCGCC 58.152 50.000 4.18 0.00 0.00 6.53
212 213 0.776451 GTACGATCTTATGTGCGCCG 59.224 55.000 4.18 0.00 0.00 6.46
213 214 0.937699 TACGATCTTATGTGCGCCGC 60.938 55.000 4.18 0.00 0.00 6.53
214 215 2.546321 GATCTTATGTGCGCCGCG 59.454 61.111 8.83 8.83 0.00 6.46
215 216 2.202878 ATCTTATGTGCGCCGCGT 60.203 55.556 15.34 1.43 0.00 6.01
216 217 0.937699 GATCTTATGTGCGCCGCGTA 60.938 55.000 15.34 7.13 0.00 4.42
217 218 0.528901 ATCTTATGTGCGCCGCGTAA 60.529 50.000 15.34 9.12 0.00 3.18
218 219 0.528901 TCTTATGTGCGCCGCGTAAT 60.529 50.000 15.34 8.25 0.00 1.89
219 220 0.303493 CTTATGTGCGCCGCGTAATT 59.697 50.000 15.34 3.40 0.00 1.40
220 221 0.727970 TTATGTGCGCCGCGTAATTT 59.272 45.000 15.34 0.83 0.00 1.82
221 222 1.568606 TATGTGCGCCGCGTAATTTA 58.431 45.000 15.34 0.00 0.00 1.40
222 223 0.303493 ATGTGCGCCGCGTAATTTAG 59.697 50.000 15.34 0.00 0.00 1.85
223 224 0.736672 TGTGCGCCGCGTAATTTAGA 60.737 50.000 15.34 0.00 0.00 2.10
224 225 0.043310 GTGCGCCGCGTAATTTAGAG 60.043 55.000 15.34 0.00 0.00 2.43
225 226 0.179132 TGCGCCGCGTAATTTAGAGA 60.179 50.000 15.34 0.00 0.00 3.10
226 227 0.925466 GCGCCGCGTAATTTAGAGAA 59.075 50.000 15.34 0.00 0.00 2.87
227 228 1.071436 GCGCCGCGTAATTTAGAGAAG 60.071 52.381 15.34 0.00 0.00 2.85
228 229 2.456989 CGCCGCGTAATTTAGAGAAGA 58.543 47.619 4.92 0.00 0.00 2.87
229 230 3.050619 CGCCGCGTAATTTAGAGAAGAT 58.949 45.455 4.92 0.00 0.00 2.40
230 231 4.224433 CGCCGCGTAATTTAGAGAAGATA 58.776 43.478 4.92 0.00 0.00 1.98
231 232 4.678287 CGCCGCGTAATTTAGAGAAGATAA 59.322 41.667 4.92 0.00 0.00 1.75
232 233 5.345202 CGCCGCGTAATTTAGAGAAGATAAT 59.655 40.000 4.92 0.00 0.00 1.28
233 234 6.525628 CGCCGCGTAATTTAGAGAAGATAATA 59.474 38.462 4.92 0.00 0.00 0.98
234 235 7.061441 CGCCGCGTAATTTAGAGAAGATAATAA 59.939 37.037 4.92 0.00 0.00 1.40
235 236 8.706035 GCCGCGTAATTTAGAGAAGATAATAAA 58.294 33.333 4.92 0.00 0.00 1.40
293 294 9.877178 ATCTTCAATAACTAGACGTTTCTGAAT 57.123 29.630 0.00 0.00 35.86 2.57
299 300 8.873215 ATAACTAGACGTTTCTGAATATGTGG 57.127 34.615 0.00 0.00 37.05 4.17
300 301 6.282199 ACTAGACGTTTCTGAATATGTGGT 57.718 37.500 0.00 0.00 32.75 4.16
301 302 6.100004 ACTAGACGTTTCTGAATATGTGGTG 58.900 40.000 0.00 0.00 32.75 4.17
302 303 5.147330 AGACGTTTCTGAATATGTGGTGA 57.853 39.130 0.00 0.00 0.00 4.02
303 304 5.171476 AGACGTTTCTGAATATGTGGTGAG 58.829 41.667 0.00 0.00 0.00 3.51
304 305 5.047306 AGACGTTTCTGAATATGTGGTGAGA 60.047 40.000 0.00 0.00 0.00 3.27
305 306 5.734720 ACGTTTCTGAATATGTGGTGAGAT 58.265 37.500 0.00 0.00 0.00 2.75
306 307 6.873997 ACGTTTCTGAATATGTGGTGAGATA 58.126 36.000 0.00 0.00 0.00 1.98
307 308 7.327975 ACGTTTCTGAATATGTGGTGAGATAA 58.672 34.615 0.00 0.00 0.00 1.75
308 309 7.987458 ACGTTTCTGAATATGTGGTGAGATAAT 59.013 33.333 0.00 0.00 0.00 1.28
309 310 8.830580 CGTTTCTGAATATGTGGTGAGATAATT 58.169 33.333 0.00 0.00 0.00 1.40
310 311 9.941664 GTTTCTGAATATGTGGTGAGATAATTG 57.058 33.333 0.00 0.00 0.00 2.32
311 312 9.685276 TTTCTGAATATGTGGTGAGATAATTGT 57.315 29.630 0.00 0.00 0.00 2.71
312 313 9.685276 TTCTGAATATGTGGTGAGATAATTGTT 57.315 29.630 0.00 0.00 0.00 2.83
313 314 9.112725 TCTGAATATGTGGTGAGATAATTGTTG 57.887 33.333 0.00 0.00 0.00 3.33
314 315 7.706159 TGAATATGTGGTGAGATAATTGTTGC 58.294 34.615 0.00 0.00 0.00 4.17
315 316 7.557358 TGAATATGTGGTGAGATAATTGTTGCT 59.443 33.333 0.00 0.00 0.00 3.91
316 317 8.978874 AATATGTGGTGAGATAATTGTTGCTA 57.021 30.769 0.00 0.00 0.00 3.49
317 318 8.978874 ATATGTGGTGAGATAATTGTTGCTAA 57.021 30.769 0.00 0.00 0.00 3.09
318 319 6.741992 TGTGGTGAGATAATTGTTGCTAAG 57.258 37.500 0.00 0.00 0.00 2.18
319 320 6.472016 TGTGGTGAGATAATTGTTGCTAAGA 58.528 36.000 0.00 0.00 0.00 2.10
320 321 6.595326 TGTGGTGAGATAATTGTTGCTAAGAG 59.405 38.462 0.00 0.00 0.00 2.85
321 322 6.818644 GTGGTGAGATAATTGTTGCTAAGAGA 59.181 38.462 0.00 0.00 0.00 3.10
322 323 7.497249 GTGGTGAGATAATTGTTGCTAAGAGAT 59.503 37.037 0.00 0.00 0.00 2.75
323 324 7.712639 TGGTGAGATAATTGTTGCTAAGAGATC 59.287 37.037 0.00 0.00 0.00 2.75
324 325 7.712639 GGTGAGATAATTGTTGCTAAGAGATCA 59.287 37.037 0.00 0.00 0.00 2.92
325 326 9.270640 GTGAGATAATTGTTGCTAAGAGATCAT 57.729 33.333 0.00 0.00 0.00 2.45
326 327 9.486497 TGAGATAATTGTTGCTAAGAGATCATC 57.514 33.333 0.00 0.00 0.00 2.92
327 328 9.709495 GAGATAATTGTTGCTAAGAGATCATCT 57.291 33.333 0.00 0.00 41.27 2.90
332 333 9.896645 AATTGTTGCTAAGAGATCATCTTCTAA 57.103 29.630 9.73 3.90 45.50 2.10
334 335 9.896645 TTGTTGCTAAGAGATCATCTTCTAATT 57.103 29.630 9.73 0.00 45.50 1.40
378 379 9.965902 TTTTTATGATTTCTCTCTTCTAGGCTT 57.034 29.630 0.00 0.00 0.00 4.35
379 380 9.606631 TTTTATGATTTCTCTCTTCTAGGCTTC 57.393 33.333 0.00 0.00 0.00 3.86
380 381 8.546083 TTATGATTTCTCTCTTCTAGGCTTCT 57.454 34.615 0.00 0.00 0.00 2.85
381 382 6.463995 TGATTTCTCTCTTCTAGGCTTCTC 57.536 41.667 0.00 0.00 0.00 2.87
382 383 5.362430 TGATTTCTCTCTTCTAGGCTTCTCC 59.638 44.000 0.00 0.00 0.00 3.71
383 384 4.323569 TTCTCTCTTCTAGGCTTCTCCA 57.676 45.455 0.00 0.00 37.29 3.86
384 385 4.323569 TCTCTCTTCTAGGCTTCTCCAA 57.676 45.455 0.00 0.00 37.29 3.53
385 386 4.020543 TCTCTCTTCTAGGCTTCTCCAAC 58.979 47.826 0.00 0.00 37.29 3.77
386 387 2.755655 TCTCTTCTAGGCTTCTCCAACG 59.244 50.000 0.00 0.00 37.29 4.10
387 388 2.755655 CTCTTCTAGGCTTCTCCAACGA 59.244 50.000 0.00 0.00 37.29 3.85
388 389 3.162666 TCTTCTAGGCTTCTCCAACGAA 58.837 45.455 0.00 0.00 37.29 3.85
389 390 3.193691 TCTTCTAGGCTTCTCCAACGAAG 59.806 47.826 0.00 0.00 42.52 3.79
391 392 3.693807 TCTAGGCTTCTCCAACGAAGTA 58.306 45.455 0.00 0.00 45.00 2.24
392 393 4.279145 TCTAGGCTTCTCCAACGAAGTAT 58.721 43.478 0.00 0.00 45.00 2.12
393 394 3.983044 AGGCTTCTCCAACGAAGTATT 57.017 42.857 0.00 0.00 45.00 1.89
394 395 4.287766 AGGCTTCTCCAACGAAGTATTT 57.712 40.909 0.00 0.00 45.00 1.40
395 396 5.416271 AGGCTTCTCCAACGAAGTATTTA 57.584 39.130 0.00 0.00 45.00 1.40
396 397 5.990668 AGGCTTCTCCAACGAAGTATTTAT 58.009 37.500 0.00 0.00 45.00 1.40
397 398 6.049790 AGGCTTCTCCAACGAAGTATTTATC 58.950 40.000 0.00 0.00 45.00 1.75
398 399 5.236695 GGCTTCTCCAACGAAGTATTTATCC 59.763 44.000 0.00 0.00 45.00 2.59
399 400 6.049790 GCTTCTCCAACGAAGTATTTATCCT 58.950 40.000 0.00 0.00 45.00 3.24
400 401 7.208080 GCTTCTCCAACGAAGTATTTATCCTA 58.792 38.462 0.00 0.00 45.00 2.94
401 402 7.873505 GCTTCTCCAACGAAGTATTTATCCTAT 59.126 37.037 0.00 0.00 45.00 2.57
402 403 9.197694 CTTCTCCAACGAAGTATTTATCCTATG 57.802 37.037 0.00 0.00 45.00 2.23
403 404 8.246430 TCTCCAACGAAGTATTTATCCTATGT 57.754 34.615 0.00 0.00 45.00 2.29
404 405 8.701895 TCTCCAACGAAGTATTTATCCTATGTT 58.298 33.333 0.00 0.00 45.00 2.71
405 406 8.657074 TCCAACGAAGTATTTATCCTATGTTG 57.343 34.615 0.00 0.00 45.00 3.33
406 407 7.225931 TCCAACGAAGTATTTATCCTATGTTGC 59.774 37.037 0.00 0.00 45.00 4.17
407 408 7.011950 CCAACGAAGTATTTATCCTATGTTGCA 59.988 37.037 0.00 0.00 45.00 4.08
408 409 7.478520 ACGAAGTATTTATCCTATGTTGCAC 57.521 36.000 0.00 0.00 41.94 4.57
409 410 7.272978 ACGAAGTATTTATCCTATGTTGCACT 58.727 34.615 0.00 0.00 41.94 4.40
410 411 7.769044 ACGAAGTATTTATCCTATGTTGCACTT 59.231 33.333 0.00 0.00 41.94 3.16
411 412 8.276325 CGAAGTATTTATCCTATGTTGCACTTC 58.724 37.037 0.00 0.00 36.45 3.01
412 413 9.331282 GAAGTATTTATCCTATGTTGCACTTCT 57.669 33.333 0.00 0.00 36.72 2.85
420 421 6.459066 TCCTATGTTGCACTTCTATGATAGC 58.541 40.000 0.00 0.00 0.00 2.97
421 422 6.041979 TCCTATGTTGCACTTCTATGATAGCA 59.958 38.462 0.00 0.00 0.00 3.49
422 423 5.998454 ATGTTGCACTTCTATGATAGCAC 57.002 39.130 0.00 0.00 0.00 4.40
423 424 5.089970 TGTTGCACTTCTATGATAGCACT 57.910 39.130 0.00 0.00 0.00 4.40
424 425 6.220726 TGTTGCACTTCTATGATAGCACTA 57.779 37.500 0.00 0.00 0.00 2.74
425 426 6.820335 TGTTGCACTTCTATGATAGCACTAT 58.180 36.000 0.00 0.00 0.00 2.12
426 427 7.275183 TGTTGCACTTCTATGATAGCACTATT 58.725 34.615 0.00 0.00 0.00 1.73
427 428 7.225341 TGTTGCACTTCTATGATAGCACTATTG 59.775 37.037 0.00 0.00 0.00 1.90
428 429 6.820335 TGCACTTCTATGATAGCACTATTGT 58.180 36.000 0.00 0.00 0.00 2.71
429 430 7.951591 TGCACTTCTATGATAGCACTATTGTA 58.048 34.615 0.00 0.00 0.00 2.41
430 431 7.867909 TGCACTTCTATGATAGCACTATTGTAC 59.132 37.037 0.00 0.00 0.00 2.90
431 432 7.867909 GCACTTCTATGATAGCACTATTGTACA 59.132 37.037 0.00 0.00 0.00 2.90
432 433 9.920133 CACTTCTATGATAGCACTATTGTACAT 57.080 33.333 0.00 0.00 0.00 2.29
433 434 9.920133 ACTTCTATGATAGCACTATTGTACATG 57.080 33.333 0.00 0.00 0.00 3.21
434 435 8.763049 TTCTATGATAGCACTATTGTACATGC 57.237 34.615 10.53 10.53 38.39 4.06
435 436 7.323420 TCTATGATAGCACTATTGTACATGCC 58.677 38.462 14.08 2.25 38.92 4.40
436 437 5.551305 TGATAGCACTATTGTACATGCCT 57.449 39.130 14.08 4.07 38.92 4.75
437 438 5.928976 TGATAGCACTATTGTACATGCCTT 58.071 37.500 14.08 3.92 38.92 4.35
438 439 5.991606 TGATAGCACTATTGTACATGCCTTC 59.008 40.000 14.08 11.79 38.92 3.46
439 440 3.198068 AGCACTATTGTACATGCCTTCG 58.802 45.455 14.08 0.00 38.92 3.79
440 441 2.286418 GCACTATTGTACATGCCTTCGC 60.286 50.000 7.77 0.00 31.71 4.70
509 511 3.507786 TGTTGTCTCGATTATGTGACGG 58.492 45.455 0.00 0.00 35.64 4.79
516 518 3.713288 TCGATTATGTGACGGGCTTAAG 58.287 45.455 0.00 0.00 0.00 1.85
522 524 3.536956 TGTGACGGGCTTAAGATAAGG 57.463 47.619 6.67 0.00 0.00 2.69
530 532 4.201657 GGGCTTAAGATAAGGCGGTTTTA 58.798 43.478 6.67 0.00 42.97 1.52
533 535 5.529800 GGCTTAAGATAAGGCGGTTTTATCA 59.470 40.000 6.67 0.00 39.09 2.15
571 573 4.467769 CCATATGCACCTCCAATTTCTCT 58.532 43.478 0.00 0.00 0.00 3.10
578 580 1.936547 CCTCCAATTTCTCTACAGCGC 59.063 52.381 0.00 0.00 0.00 5.92
659 661 4.840288 CATGCCATGCACGCACCG 62.840 66.667 12.21 3.86 43.04 4.94
688 690 3.264897 CCGCGCATTTCTCTCCCG 61.265 66.667 8.75 0.00 0.00 5.14
743 745 1.301009 GATCGCCCGAATCCCTGAC 60.301 63.158 0.00 0.00 0.00 3.51
814 828 4.794439 CCACGTCGCGCTGATCCA 62.794 66.667 5.56 0.00 0.00 3.41
835 849 1.414550 TCCAACGTTGTCTCATCCACA 59.585 47.619 25.63 0.00 0.00 4.17
872 887 1.601903 ACCTCGACGTACGTAACACAA 59.398 47.619 22.87 2.49 43.13 3.33
918 933 2.514824 GAGGAACCATGAGGCCGC 60.515 66.667 0.00 0.00 39.06 6.53
1509 1524 3.447944 AGAAGGTCCAGTTAGTTCGGATC 59.552 47.826 0.00 0.00 0.00 3.36
1520 1535 7.041372 CCAGTTAGTTCGGATCAGAAAAGAAAA 60.041 37.037 9.99 0.00 0.00 2.29
1543 1558 6.840780 AAACAAAACTAGGCTGCTATTGAT 57.159 33.333 0.00 0.00 0.00 2.57
1544 1559 6.840780 AACAAAACTAGGCTGCTATTGATT 57.159 33.333 0.00 0.00 0.00 2.57
1545 1560 6.840780 ACAAAACTAGGCTGCTATTGATTT 57.159 33.333 0.00 0.00 0.00 2.17
1581 1596 2.575532 TGTTCTTGTTCTTGGCAGGAG 58.424 47.619 0.00 0.00 0.00 3.69
1597 1612 2.871022 CAGGAGAATCGCATCAAGAAGG 59.129 50.000 0.00 0.00 34.37 3.46
1638 1653 3.129502 CACGCGTCCTCCTCGGTA 61.130 66.667 9.86 0.00 0.00 4.02
1641 1656 2.821688 CGCGTCCTCCTCGGTACTC 61.822 68.421 0.00 0.00 0.00 2.59
1691 1706 2.281761 CCAAGAAGCAGGTGCCGT 60.282 61.111 0.00 0.00 43.38 5.68
1835 1850 4.758251 CCTGATGGACACGCCGCA 62.758 66.667 0.00 0.00 40.66 5.69
2148 2166 2.355599 CTAGAGCGGCTGGATGCG 60.356 66.667 7.50 0.00 44.05 4.73
2268 2286 2.288886 GGAGTACAACAGGGTGAGTCAC 60.289 54.545 15.24 15.24 0.00 3.67
2281 2307 3.821600 GGTGAGTCACACTCTCTGAACTA 59.178 47.826 24.20 0.00 45.27 2.24
2346 2372 8.583810 TTACTATTCTCGAAACAATTATCGGG 57.416 34.615 7.38 4.79 40.85 5.14
2366 2392 6.482524 TCGGGTCTATACATGACTAGCTAAT 58.517 40.000 0.00 0.00 35.04 1.73
2368 2394 8.105197 TCGGGTCTATACATGACTAGCTAATTA 58.895 37.037 0.00 0.00 35.04 1.40
2369 2395 8.737175 CGGGTCTATACATGACTAGCTAATTAA 58.263 37.037 0.00 0.00 35.04 1.40
2522 2550 6.649557 CGTCCTGTCTCCTTAAACTTAACATT 59.350 38.462 0.00 0.00 0.00 2.71
2555 2583 0.984230 CTGCCTGTCCTTCCTTGGTA 59.016 55.000 0.00 0.00 0.00 3.25
2576 2604 8.206126 TGGTATATCTATCTTCAAGCCATTGA 57.794 34.615 0.00 0.00 43.72 2.57
2610 2638 2.299013 TCAAGCATAACCTCACACGACT 59.701 45.455 0.00 0.00 0.00 4.18
2617 2645 5.178809 GCATAACCTCACACGACTTTTAAGT 59.821 40.000 0.00 0.00 43.16 2.24
2869 4849 7.497595 TGTATGAGAACAAGAAATATACGCCT 58.502 34.615 0.00 0.00 0.00 5.52
2886 4866 1.138859 GCCTGTTTCAACCTTTGCCTT 59.861 47.619 0.00 0.00 0.00 4.35
2952 4935 1.919956 GCAGCAAGCGAGCAACATCT 61.920 55.000 6.21 0.00 36.85 2.90
2971 4955 5.769662 ACATCTTCACCTAGCAAAACATGAA 59.230 36.000 0.00 0.00 0.00 2.57
2979 4963 8.584157 TCACCTAGCAAAACATGAACATATTTT 58.416 29.630 0.00 0.00 28.36 1.82
3025 5009 4.823442 TGTATTATGGATCAAGCTGGCAAG 59.177 41.667 0.00 0.00 0.00 4.01
3044 5028 6.428771 TGGCAAGTACAACATAAAGTTAGGAC 59.571 38.462 0.00 0.00 38.74 3.85
3106 5090 2.355513 GGCCACATGAGATGTCTTCTGT 60.356 50.000 0.00 0.00 42.70 3.41
3134 5118 8.344831 GCATCAACTGAATGCAATAGTAATACA 58.655 33.333 0.00 0.00 40.72 2.29
3199 5191 3.103738 GACTGCATGCGTGAAATTGATC 58.896 45.455 17.66 0.86 0.00 2.92
3276 5272 6.872670 TTTTACAAAAACATCACGAACACC 57.127 33.333 0.00 0.00 0.00 4.16
3733 5730 2.037144 GTAGGGGCAAAGAGATACCGA 58.963 52.381 0.00 0.00 0.00 4.69
3760 5757 4.717313 GAGGTTCCGGTGGTGGGC 62.717 72.222 0.00 0.00 0.00 5.36
3811 5808 2.763215 GGCCACCACCCAGATTGA 59.237 61.111 0.00 0.00 0.00 2.57
3877 6826 4.462133 CTGGACGGAGAGACTAAGGATTA 58.538 47.826 0.00 0.00 0.00 1.75
3917 6866 7.093552 CCCTCTGTCCCATAATATAAGAGTGAG 60.094 44.444 0.00 0.00 0.00 3.51
3944 6893 1.154197 GACGGGTGCCTTCTTACAAC 58.846 55.000 0.00 0.00 0.00 3.32
4102 7054 8.012957 TGGTTAGCTAAAATTTCAACCAAGAA 57.987 30.769 7.99 0.00 41.70 2.52
4289 7242 0.467844 AAGATGCCAGGTGTGTGCAA 60.468 50.000 0.00 0.00 34.72 4.08
4291 7244 0.890542 GATGCCAGGTGTGTGCAAGA 60.891 55.000 0.00 0.00 34.72 3.02
4325 7278 5.589855 TCTTGTTCTTCATGAGAAACTTGCA 59.410 36.000 17.88 7.16 45.59 4.08
4359 7312 8.690203 TTAATCTCCTTTCATGAACAGAAACA 57.310 30.769 7.89 0.00 32.09 2.83
4360 7313 7.771927 AATCTCCTTTCATGAACAGAAACAT 57.228 32.000 7.89 0.00 32.09 2.71
4394 7348 7.657354 GCCCTGTGAATTTTTCTTGTTCTATTT 59.343 33.333 0.00 0.00 0.00 1.40
4489 7443 3.517602 TCTTGTACGATGGTGTATGCAC 58.482 45.455 5.22 5.22 44.53 4.57
4531 7485 7.941431 TGTTTACTTGTTACTTTCCCTTTCA 57.059 32.000 0.00 0.00 0.00 2.69
4575 7529 6.355747 TCTGGCTTCCATTTTTCAATTTTGT 58.644 32.000 0.00 0.00 30.82 2.83
4644 7598 5.128827 ACATGTTGGAGGAGTACGATAACAT 59.871 40.000 0.00 0.00 37.66 2.71
4648 7602 4.788679 TGGAGGAGTACGATAACATGAGA 58.211 43.478 0.00 0.00 0.00 3.27
4654 7608 6.551601 AGGAGTACGATAACATGAGAAAGGAT 59.448 38.462 0.00 0.00 0.00 3.24
4759 7713 4.334203 TGCACAAGTACAGATGTTTTTCGT 59.666 37.500 0.00 0.00 0.00 3.85
4799 7757 6.882678 AGACATGAATCACACATCAAATCTCA 59.117 34.615 0.00 0.00 0.00 3.27
4814 7772 5.858049 TCAAATCTCACATGCATTCGAAAAC 59.142 36.000 0.00 0.00 0.00 2.43
4816 7774 5.571784 ATCTCACATGCATTCGAAAACAT 57.428 34.783 0.00 6.18 0.00 2.71
4823 7781 9.103861 TCACATGCATTCGAAAACATATAGTAA 57.896 29.630 13.90 0.00 0.00 2.24
4891 7849 0.787084 TTCTCAGGACCAGAGGAGGT 59.213 55.000 13.51 0.00 46.82 3.85
4917 7875 1.368950 GCAGAGCACAGTGGAGTCA 59.631 57.895 1.84 0.00 0.00 3.41
4998 7956 2.548875 AGCAGCAAGAAGATGATCGTC 58.451 47.619 6.84 6.84 35.00 4.20
5013 7974 0.040067 TCGTCTCGGCATCATCATCG 60.040 55.000 0.00 0.00 0.00 3.84
5025 7986 4.212636 GCATCATCATCGTCATTGTCATCA 59.787 41.667 0.00 0.00 0.00 3.07
5065 8026 4.438148 GAGCTACCTCAAGTCTTCATTCC 58.562 47.826 0.00 0.00 38.03 3.01
5086 8047 1.937391 CCGCGAAGGAGCAATGATC 59.063 57.895 8.23 0.00 45.00 2.92
5124 8085 2.233922 GGATTCTTTCGAGTGAGACCCA 59.766 50.000 0.00 0.00 0.00 4.51
5140 8101 0.606401 CCCAGTTCACGCAATGTCCT 60.606 55.000 0.00 0.00 0.00 3.85
5154 8115 1.809133 TGTCCTGTGTTCTGGGGTAA 58.191 50.000 0.00 0.00 34.13 2.85
5170 8131 3.576550 GGGGTAATTTGCTCAAAGTTGGA 59.423 43.478 0.60 0.00 33.32 3.53
5204 8165 3.058708 CACTAGTTGTCGTAGAACGGTGA 60.059 47.826 0.00 0.00 42.81 4.02
5277 8240 9.078990 AGTGATGAGAGGATACGATGTTTTATA 57.921 33.333 0.00 0.00 46.39 0.98
5451 8416 7.885009 TTTGTAGCCTTAGTTAGTTTGGTTT 57.115 32.000 0.00 0.00 0.00 3.27
5455 8420 5.314529 AGCCTTAGTTAGTTTGGTTTCCTC 58.685 41.667 0.00 0.00 0.00 3.71
5463 8428 1.039856 TTTGGTTTCCTCTGCTTGCC 58.960 50.000 0.00 0.00 0.00 4.52
5485 8450 3.002791 CTCTGGTGCATTACGACAACAT 58.997 45.455 0.00 0.00 31.98 2.71
5488 8453 2.080693 GGTGCATTACGACAACATCCA 58.919 47.619 0.00 0.00 0.00 3.41
5509 8474 3.026694 ACCTGCTTGCTTCTTTCTGTTT 58.973 40.909 0.00 0.00 0.00 2.83
5579 8545 1.004745 TCCTGGAGGATTTGGAGCAAC 59.995 52.381 0.00 0.00 39.78 4.17
5581 8547 0.400213 TGGAGGATTTGGAGCAACGT 59.600 50.000 0.00 0.00 0.00 3.99
5586 8552 1.448985 GATTTGGAGCAACGTGCCTA 58.551 50.000 6.39 0.00 46.52 3.93
5673 8639 2.560981 TCATGCTAGAGACCACGTTGAA 59.439 45.455 0.00 0.00 0.00 2.69
5746 8716 3.048600 AGGGAGGCTTTATGATGCTACA 58.951 45.455 0.00 0.00 0.00 2.74
5792 8762 1.891150 GACGGGCTCGGATAGGATTAA 59.109 52.381 12.42 0.00 41.39 1.40
5801 8771 4.699637 TCGGATAGGATTAAATTGTGCGT 58.300 39.130 0.00 0.00 0.00 5.24
5841 8811 4.709886 GTCCATATTTTGGCCAACCTTAGT 59.290 41.667 20.35 2.52 46.01 2.24
5890 8860 7.969690 AATATTTTGATACCATTCACCACCA 57.030 32.000 0.00 0.00 0.00 4.17
5932 8902 2.101415 TCCATACGAGCTCATGTTCTGG 59.899 50.000 15.40 13.71 0.00 3.86
5980 8950 1.997791 TGACTCCAGGTGTAGGTAGGA 59.002 52.381 0.00 0.00 0.00 2.94
5986 8956 4.431378 TCCAGGTGTAGGTAGGATCAAAA 58.569 43.478 0.00 0.00 0.00 2.44
6011 8981 4.022935 CGCAAGGGTCATGCAAATACATAT 60.023 41.667 0.00 0.00 44.01 1.78
6024 8994 4.832560 AATACATATGCCCCTTCCCTTT 57.167 40.909 1.58 0.00 0.00 3.11
6034 9004 1.768275 CCCTTCCCTTTTGCCAAGTTT 59.232 47.619 0.00 0.00 0.00 2.66
6070 9040 6.320418 ACTTTCTATTTTAAAATCCCGCGGAT 59.680 34.615 30.73 15.71 45.46 4.18
6108 9078 0.173708 GTACGAGCCCTCTGACTTGG 59.826 60.000 0.00 0.00 0.00 3.61
6112 9082 1.537397 AGCCCTCTGACTTGGAGCA 60.537 57.895 0.00 0.00 0.00 4.26
6113 9083 0.913451 AGCCCTCTGACTTGGAGCAT 60.913 55.000 0.00 0.00 0.00 3.79
6114 9084 0.747283 GCCCTCTGACTTGGAGCATG 60.747 60.000 0.00 0.00 0.00 4.06
6115 9085 0.617413 CCCTCTGACTTGGAGCATGT 59.383 55.000 0.00 0.00 0.00 3.21
6116 9086 1.678123 CCCTCTGACTTGGAGCATGTG 60.678 57.143 0.00 0.00 0.00 3.21
6117 9087 1.002888 CCTCTGACTTGGAGCATGTGT 59.997 52.381 0.00 0.00 0.00 3.72
6118 9088 2.551721 CCTCTGACTTGGAGCATGTGTT 60.552 50.000 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.881937 AAAGTAGTCCGCCGTAAGATT 57.118 42.857 0.00 0.00 43.02 2.40
1 2 3.194116 TGAAAAGTAGTCCGCCGTAAGAT 59.806 43.478 0.00 0.00 43.02 2.40
2 3 2.557924 TGAAAAGTAGTCCGCCGTAAGA 59.442 45.455 0.00 0.00 43.02 2.10
3 4 2.950433 TGAAAAGTAGTCCGCCGTAAG 58.050 47.619 0.00 0.00 0.00 2.34
4 5 3.383620 TTGAAAAGTAGTCCGCCGTAA 57.616 42.857 0.00 0.00 0.00 3.18
5 6 3.383620 TTTGAAAAGTAGTCCGCCGTA 57.616 42.857 0.00 0.00 0.00 4.02
6 7 2.243602 TTTGAAAAGTAGTCCGCCGT 57.756 45.000 0.00 0.00 0.00 5.68
7 8 3.000727 AGATTTGAAAAGTAGTCCGCCG 58.999 45.455 0.00 0.00 0.00 6.46
8 9 4.000988 TCAGATTTGAAAAGTAGTCCGCC 58.999 43.478 0.00 0.00 0.00 6.13
9 10 4.434330 CGTCAGATTTGAAAAGTAGTCCGC 60.434 45.833 0.00 0.00 34.49 5.54
10 11 4.684703 ACGTCAGATTTGAAAAGTAGTCCG 59.315 41.667 0.00 0.00 34.49 4.79
11 12 5.107065 CCACGTCAGATTTGAAAAGTAGTCC 60.107 44.000 0.00 0.00 34.49 3.85
12 13 5.694910 TCCACGTCAGATTTGAAAAGTAGTC 59.305 40.000 0.00 0.00 34.49 2.59
13 14 5.607477 TCCACGTCAGATTTGAAAAGTAGT 58.393 37.500 0.00 0.00 34.49 2.73
14 15 6.454318 CGATCCACGTCAGATTTGAAAAGTAG 60.454 42.308 0.00 0.00 34.49 2.57
15 16 5.347635 CGATCCACGTCAGATTTGAAAAGTA 59.652 40.000 0.00 0.00 34.49 2.24
16 17 4.152402 CGATCCACGTCAGATTTGAAAAGT 59.848 41.667 0.00 0.00 34.49 2.66
17 18 4.436050 CCGATCCACGTCAGATTTGAAAAG 60.436 45.833 0.00 0.00 40.78 2.27
18 19 3.435327 CCGATCCACGTCAGATTTGAAAA 59.565 43.478 0.00 0.00 40.78 2.29
19 20 3.000041 CCGATCCACGTCAGATTTGAAA 59.000 45.455 0.00 0.00 40.78 2.69
20 21 2.616960 CCGATCCACGTCAGATTTGAA 58.383 47.619 0.00 0.00 40.78 2.69
21 22 1.739035 GCCGATCCACGTCAGATTTGA 60.739 52.381 0.00 0.00 40.78 2.69
22 23 0.652592 GCCGATCCACGTCAGATTTG 59.347 55.000 0.00 0.00 40.78 2.32
23 24 0.462047 GGCCGATCCACGTCAGATTT 60.462 55.000 0.00 0.00 40.78 2.17
24 25 1.144057 GGCCGATCCACGTCAGATT 59.856 57.895 0.00 0.00 40.78 2.40
25 26 2.797278 GGGCCGATCCACGTCAGAT 61.797 63.158 0.00 0.00 40.78 2.90
26 27 3.458163 GGGCCGATCCACGTCAGA 61.458 66.667 0.00 0.00 40.78 3.27
27 28 3.461773 AGGGCCGATCCACGTCAG 61.462 66.667 0.00 0.00 40.78 3.51
28 29 3.770040 CAGGGCCGATCCACGTCA 61.770 66.667 0.00 0.00 40.78 4.35
40 41 0.822532 CATGGATCTCAAGGCAGGGC 60.823 60.000 0.00 0.00 0.00 5.19
41 42 0.549950 ACATGGATCTCAAGGCAGGG 59.450 55.000 0.00 0.00 0.00 4.45
42 43 3.209410 GTTACATGGATCTCAAGGCAGG 58.791 50.000 0.00 0.00 0.00 4.85
43 44 3.877559 TGTTACATGGATCTCAAGGCAG 58.122 45.455 0.00 0.00 0.00 4.85
44 45 3.998913 TGTTACATGGATCTCAAGGCA 57.001 42.857 0.00 0.00 0.00 4.75
45 46 4.037208 CCAATGTTACATGGATCTCAAGGC 59.963 45.833 0.48 0.00 39.12 4.35
46 47 4.581824 CCCAATGTTACATGGATCTCAAGG 59.418 45.833 12.94 0.00 39.12 3.61
47 48 4.581824 CCCCAATGTTACATGGATCTCAAG 59.418 45.833 12.94 0.00 39.12 3.02
48 49 4.229353 TCCCCAATGTTACATGGATCTCAA 59.771 41.667 12.94 0.00 39.12 3.02
49 50 3.785325 TCCCCAATGTTACATGGATCTCA 59.215 43.478 12.94 0.00 39.12 3.27
50 51 4.392940 CTCCCCAATGTTACATGGATCTC 58.607 47.826 12.94 0.00 39.12 2.75
51 52 3.139025 CCTCCCCAATGTTACATGGATCT 59.861 47.826 12.94 0.00 39.12 2.75
52 53 3.490348 CCTCCCCAATGTTACATGGATC 58.510 50.000 12.94 0.00 39.12 3.36
53 54 2.177669 CCCTCCCCAATGTTACATGGAT 59.822 50.000 12.94 0.00 39.12 3.41
54 55 1.568597 CCCTCCCCAATGTTACATGGA 59.431 52.381 12.94 8.49 39.12 3.41
55 56 2.028996 GCCCTCCCCAATGTTACATGG 61.029 57.143 0.00 2.93 36.42 3.66
56 57 1.402787 GCCCTCCCCAATGTTACATG 58.597 55.000 0.00 0.00 0.00 3.21
57 58 0.106719 CGCCCTCCCCAATGTTACAT 60.107 55.000 0.00 0.00 0.00 2.29
58 59 1.301623 CGCCCTCCCCAATGTTACA 59.698 57.895 0.00 0.00 0.00 2.41
59 60 0.746923 GACGCCCTCCCCAATGTTAC 60.747 60.000 0.00 0.00 0.00 2.50
60 61 1.605453 GACGCCCTCCCCAATGTTA 59.395 57.895 0.00 0.00 0.00 2.41
61 62 2.355115 GACGCCCTCCCCAATGTT 59.645 61.111 0.00 0.00 0.00 2.71
62 63 3.728373 GGACGCCCTCCCCAATGT 61.728 66.667 0.00 0.00 31.83 2.71
63 64 4.856801 CGGACGCCCTCCCCAATG 62.857 72.222 0.00 0.00 35.21 2.82
73 74 4.899239 CATCTCCCAGCGGACGCC 62.899 72.222 13.63 0.00 43.17 5.68
75 76 4.899239 GGCATCTCCCAGCGGACG 62.899 72.222 0.00 0.00 33.32 4.79
76 77 2.819984 TTTGGCATCTCCCAGCGGAC 62.820 60.000 0.00 0.00 36.00 4.79
77 78 1.925285 ATTTGGCATCTCCCAGCGGA 61.925 55.000 0.00 0.00 36.00 5.54
78 79 0.179020 TATTTGGCATCTCCCAGCGG 60.179 55.000 0.00 0.00 36.00 5.52
79 80 1.808945 GATATTTGGCATCTCCCAGCG 59.191 52.381 0.00 0.00 36.00 5.18
80 81 2.818432 CAGATATTTGGCATCTCCCAGC 59.182 50.000 0.00 0.00 36.00 4.85
81 82 4.070716 GTCAGATATTTGGCATCTCCCAG 58.929 47.826 0.00 0.00 36.00 4.45
82 83 3.494924 CGTCAGATATTTGGCATCTCCCA 60.495 47.826 0.00 0.00 30.18 4.37
83 84 3.070018 CGTCAGATATTTGGCATCTCCC 58.930 50.000 0.00 0.00 30.18 4.30
84 85 3.070018 CCGTCAGATATTTGGCATCTCC 58.930 50.000 0.00 0.00 30.18 3.71
85 86 3.743396 GTCCGTCAGATATTTGGCATCTC 59.257 47.826 0.00 0.00 30.18 2.75
86 87 3.733337 GTCCGTCAGATATTTGGCATCT 58.267 45.455 0.00 0.00 32.90 2.90
87 88 2.476619 CGTCCGTCAGATATTTGGCATC 59.523 50.000 0.00 0.00 0.00 3.91
88 89 2.483876 CGTCCGTCAGATATTTGGCAT 58.516 47.619 0.00 0.00 0.00 4.40
89 90 1.934589 CGTCCGTCAGATATTTGGCA 58.065 50.000 0.00 0.00 0.00 4.92
90 91 0.582005 GCGTCCGTCAGATATTTGGC 59.418 55.000 0.00 0.00 0.00 4.52
91 92 0.852777 CGCGTCCGTCAGATATTTGG 59.147 55.000 0.00 0.00 0.00 3.28
92 93 1.781429 CTCGCGTCCGTCAGATATTTG 59.219 52.381 5.77 0.00 35.54 2.32
93 94 1.674441 TCTCGCGTCCGTCAGATATTT 59.326 47.619 5.77 0.00 35.54 1.40
94 95 1.306148 TCTCGCGTCCGTCAGATATT 58.694 50.000 5.77 0.00 35.54 1.28
95 96 1.524848 ATCTCGCGTCCGTCAGATAT 58.475 50.000 5.77 0.00 29.45 1.63
96 97 2.159327 TATCTCGCGTCCGTCAGATA 57.841 50.000 5.77 7.44 32.42 1.98
97 98 1.002684 GTTATCTCGCGTCCGTCAGAT 60.003 52.381 5.77 8.53 33.97 2.90
98 99 0.376152 GTTATCTCGCGTCCGTCAGA 59.624 55.000 5.77 0.00 35.54 3.27
99 100 0.098200 TGTTATCTCGCGTCCGTCAG 59.902 55.000 5.77 0.00 35.54 3.51
100 101 0.736636 ATGTTATCTCGCGTCCGTCA 59.263 50.000 5.77 0.42 35.54 4.35
101 102 1.836383 AATGTTATCTCGCGTCCGTC 58.164 50.000 5.77 0.00 35.54 4.79
102 103 2.288961 AAATGTTATCTCGCGTCCGT 57.711 45.000 5.77 0.00 35.54 4.69
103 104 3.306166 AGAAAAATGTTATCTCGCGTCCG 59.694 43.478 5.77 0.00 0.00 4.79
104 105 4.859629 AGAAAAATGTTATCTCGCGTCC 57.140 40.909 5.77 0.00 0.00 4.79
105 106 8.649810 TTTTTAGAAAAATGTTATCTCGCGTC 57.350 30.769 5.77 0.00 33.29 5.19
140 141 9.787532 TGCCGATCATTTCTTAATTAAAAGAAG 57.212 29.630 0.00 0.00 44.15 2.85
142 143 9.734620 CATGCCGATCATTTCTTAATTAAAAGA 57.265 29.630 0.00 0.00 31.79 2.52
143 144 9.520204 ACATGCCGATCATTTCTTAATTAAAAG 57.480 29.630 0.00 0.00 31.79 2.27
145 146 9.944663 GTACATGCCGATCATTTCTTAATTAAA 57.055 29.630 0.00 0.00 31.79 1.52
146 147 9.114952 TGTACATGCCGATCATTTCTTAATTAA 57.885 29.630 0.00 0.00 31.79 1.40
147 148 8.669946 TGTACATGCCGATCATTTCTTAATTA 57.330 30.769 0.00 0.00 31.79 1.40
148 149 7.566760 TGTACATGCCGATCATTTCTTAATT 57.433 32.000 0.00 0.00 31.79 1.40
149 150 7.566760 TTGTACATGCCGATCATTTCTTAAT 57.433 32.000 0.00 0.00 31.79 1.40
150 151 6.993786 TTGTACATGCCGATCATTTCTTAA 57.006 33.333 0.00 0.00 31.79 1.85
151 152 6.017192 CCATTGTACATGCCGATCATTTCTTA 60.017 38.462 0.00 0.00 31.79 2.10
152 153 5.221106 CCATTGTACATGCCGATCATTTCTT 60.221 40.000 0.00 0.00 31.79 2.52
153 154 4.276678 CCATTGTACATGCCGATCATTTCT 59.723 41.667 0.00 0.00 31.79 2.52
154 155 4.036734 ACCATTGTACATGCCGATCATTTC 59.963 41.667 0.00 0.00 31.79 2.17
155 156 3.953612 ACCATTGTACATGCCGATCATTT 59.046 39.130 0.00 0.00 31.79 2.32
156 157 3.554934 ACCATTGTACATGCCGATCATT 58.445 40.909 0.00 0.00 31.79 2.57
157 158 3.213206 ACCATTGTACATGCCGATCAT 57.787 42.857 0.00 0.00 35.31 2.45
158 159 2.682352 CAACCATTGTACATGCCGATCA 59.318 45.455 0.00 0.00 0.00 2.92
159 160 2.033299 CCAACCATTGTACATGCCGATC 59.967 50.000 0.00 0.00 0.00 3.69
160 161 2.023673 CCAACCATTGTACATGCCGAT 58.976 47.619 0.00 0.00 0.00 4.18
161 162 1.271652 ACCAACCATTGTACATGCCGA 60.272 47.619 0.00 0.00 0.00 5.54
162 163 1.173043 ACCAACCATTGTACATGCCG 58.827 50.000 0.00 0.00 0.00 5.69
163 164 3.130340 CCTTACCAACCATTGTACATGCC 59.870 47.826 0.00 0.00 0.00 4.40
164 165 3.428862 GCCTTACCAACCATTGTACATGC 60.429 47.826 0.00 0.00 0.00 4.06
165 166 4.016444 AGCCTTACCAACCATTGTACATG 58.984 43.478 0.00 0.00 0.00 3.21
166 167 4.016444 CAGCCTTACCAACCATTGTACAT 58.984 43.478 0.00 0.00 0.00 2.29
167 168 3.181438 ACAGCCTTACCAACCATTGTACA 60.181 43.478 0.00 0.00 0.00 2.90
168 169 3.418047 ACAGCCTTACCAACCATTGTAC 58.582 45.455 0.00 0.00 0.00 2.90
169 170 3.799432 ACAGCCTTACCAACCATTGTA 57.201 42.857 0.00 0.00 0.00 2.41
170 171 2.675658 ACAGCCTTACCAACCATTGT 57.324 45.000 0.00 0.00 0.00 2.71
171 172 4.057432 CAAAACAGCCTTACCAACCATTG 58.943 43.478 0.00 0.00 0.00 2.82
172 173 3.709141 ACAAAACAGCCTTACCAACCATT 59.291 39.130 0.00 0.00 0.00 3.16
173 174 3.304829 ACAAAACAGCCTTACCAACCAT 58.695 40.909 0.00 0.00 0.00 3.55
174 175 2.741145 ACAAAACAGCCTTACCAACCA 58.259 42.857 0.00 0.00 0.00 3.67
175 176 3.304190 CGTACAAAACAGCCTTACCAACC 60.304 47.826 0.00 0.00 0.00 3.77
176 177 3.560896 TCGTACAAAACAGCCTTACCAAC 59.439 43.478 0.00 0.00 0.00 3.77
177 178 3.806380 TCGTACAAAACAGCCTTACCAA 58.194 40.909 0.00 0.00 0.00 3.67
178 179 3.472283 TCGTACAAAACAGCCTTACCA 57.528 42.857 0.00 0.00 0.00 3.25
179 180 4.251268 AGATCGTACAAAACAGCCTTACC 58.749 43.478 0.00 0.00 0.00 2.85
180 181 5.857822 AAGATCGTACAAAACAGCCTTAC 57.142 39.130 0.00 0.00 0.00 2.34
181 182 7.064134 CACATAAGATCGTACAAAACAGCCTTA 59.936 37.037 0.00 0.00 0.00 2.69
182 183 5.938125 ACATAAGATCGTACAAAACAGCCTT 59.062 36.000 0.00 0.00 0.00 4.35
183 184 5.351465 CACATAAGATCGTACAAAACAGCCT 59.649 40.000 0.00 0.00 0.00 4.58
184 185 5.560148 CACATAAGATCGTACAAAACAGCC 58.440 41.667 0.00 0.00 0.00 4.85
185 186 5.022021 GCACATAAGATCGTACAAAACAGC 58.978 41.667 0.00 0.00 0.00 4.40
186 187 5.248087 CGCACATAAGATCGTACAAAACAG 58.752 41.667 0.00 0.00 0.00 3.16
187 188 4.434989 GCGCACATAAGATCGTACAAAACA 60.435 41.667 0.30 0.00 0.00 2.83
188 189 4.019867 GCGCACATAAGATCGTACAAAAC 58.980 43.478 0.30 0.00 0.00 2.43
189 190 3.062909 GGCGCACATAAGATCGTACAAAA 59.937 43.478 10.83 0.00 0.00 2.44
190 191 2.605818 GGCGCACATAAGATCGTACAAA 59.394 45.455 10.83 0.00 0.00 2.83
191 192 2.198406 GGCGCACATAAGATCGTACAA 58.802 47.619 10.83 0.00 0.00 2.41
192 193 1.847818 GGCGCACATAAGATCGTACA 58.152 50.000 10.83 0.00 0.00 2.90
193 194 0.776451 CGGCGCACATAAGATCGTAC 59.224 55.000 10.83 0.00 0.00 3.67
194 195 0.937699 GCGGCGCACATAAGATCGTA 60.938 55.000 29.21 0.00 0.00 3.43
195 196 2.237751 GCGGCGCACATAAGATCGT 61.238 57.895 29.21 0.00 0.00 3.73
196 197 2.546321 GCGGCGCACATAAGATCG 59.454 61.111 29.21 0.25 0.00 3.69
197 198 0.937699 TACGCGGCGCACATAAGATC 60.938 55.000 32.61 0.00 0.00 2.75
198 199 0.528901 TTACGCGGCGCACATAAGAT 60.529 50.000 32.61 8.28 0.00 2.40
199 200 0.528901 ATTACGCGGCGCACATAAGA 60.529 50.000 32.61 9.98 0.00 2.10
200 201 0.303493 AATTACGCGGCGCACATAAG 59.697 50.000 32.61 16.61 0.00 1.73
201 202 0.727970 AAATTACGCGGCGCACATAA 59.272 45.000 32.61 24.52 0.00 1.90
202 203 1.523515 CTAAATTACGCGGCGCACATA 59.476 47.619 32.61 17.52 0.00 2.29
203 204 0.303493 CTAAATTACGCGGCGCACAT 59.697 50.000 32.61 18.63 0.00 3.21
204 205 0.736672 TCTAAATTACGCGGCGCACA 60.737 50.000 32.61 15.91 0.00 4.57
205 206 0.043310 CTCTAAATTACGCGGCGCAC 60.043 55.000 32.61 3.11 0.00 5.34
206 207 0.179132 TCTCTAAATTACGCGGCGCA 60.179 50.000 32.61 13.44 0.00 6.09
207 208 0.925466 TTCTCTAAATTACGCGGCGC 59.075 50.000 24.21 24.21 0.00 6.53
208 209 2.456989 TCTTCTCTAAATTACGCGGCG 58.543 47.619 22.36 22.36 0.00 6.46
209 210 6.707599 ATTATCTTCTCTAAATTACGCGGC 57.292 37.500 12.47 0.00 0.00 6.53
267 268 9.877178 ATTCAGAAACGTCTAGTTATTGAAGAT 57.123 29.630 0.00 0.57 42.80 2.40
273 274 9.314321 CCACATATTCAGAAACGTCTAGTTATT 57.686 33.333 0.00 0.00 43.37 1.40
274 275 8.475639 ACCACATATTCAGAAACGTCTAGTTAT 58.524 33.333 0.00 0.00 43.37 1.89
275 276 7.758076 CACCACATATTCAGAAACGTCTAGTTA 59.242 37.037 0.00 0.00 43.37 2.24
276 277 6.590292 CACCACATATTCAGAAACGTCTAGTT 59.410 38.462 0.00 0.00 46.76 2.24
277 278 6.071560 TCACCACATATTCAGAAACGTCTAGT 60.072 38.462 0.00 0.00 30.85 2.57
278 279 6.330278 TCACCACATATTCAGAAACGTCTAG 58.670 40.000 0.00 0.00 30.85 2.43
279 280 6.152154 TCTCACCACATATTCAGAAACGTCTA 59.848 38.462 0.00 0.00 30.85 2.59
280 281 5.047306 TCTCACCACATATTCAGAAACGTCT 60.047 40.000 0.00 0.00 32.85 4.18
281 282 5.168569 TCTCACCACATATTCAGAAACGTC 58.831 41.667 0.00 0.00 0.00 4.34
282 283 5.147330 TCTCACCACATATTCAGAAACGT 57.853 39.130 0.00 0.00 0.00 3.99
283 284 7.770801 TTATCTCACCACATATTCAGAAACG 57.229 36.000 0.00 0.00 0.00 3.60
284 285 9.941664 CAATTATCTCACCACATATTCAGAAAC 57.058 33.333 0.00 0.00 0.00 2.78
285 286 9.685276 ACAATTATCTCACCACATATTCAGAAA 57.315 29.630 0.00 0.00 0.00 2.52
286 287 9.685276 AACAATTATCTCACCACATATTCAGAA 57.315 29.630 0.00 0.00 0.00 3.02
287 288 9.112725 CAACAATTATCTCACCACATATTCAGA 57.887 33.333 0.00 0.00 0.00 3.27
288 289 7.859377 GCAACAATTATCTCACCACATATTCAG 59.141 37.037 0.00 0.00 0.00 3.02
289 290 7.557358 AGCAACAATTATCTCACCACATATTCA 59.443 33.333 0.00 0.00 0.00 2.57
290 291 7.934457 AGCAACAATTATCTCACCACATATTC 58.066 34.615 0.00 0.00 0.00 1.75
291 292 7.886629 AGCAACAATTATCTCACCACATATT 57.113 32.000 0.00 0.00 0.00 1.28
292 293 8.978874 TTAGCAACAATTATCTCACCACATAT 57.021 30.769 0.00 0.00 0.00 1.78
293 294 8.264347 TCTTAGCAACAATTATCTCACCACATA 58.736 33.333 0.00 0.00 0.00 2.29
294 295 7.112122 TCTTAGCAACAATTATCTCACCACAT 58.888 34.615 0.00 0.00 0.00 3.21
295 296 6.472016 TCTTAGCAACAATTATCTCACCACA 58.528 36.000 0.00 0.00 0.00 4.17
296 297 6.818644 TCTCTTAGCAACAATTATCTCACCAC 59.181 38.462 0.00 0.00 0.00 4.16
297 298 6.946340 TCTCTTAGCAACAATTATCTCACCA 58.054 36.000 0.00 0.00 0.00 4.17
298 299 7.712639 TGATCTCTTAGCAACAATTATCTCACC 59.287 37.037 0.00 0.00 0.00 4.02
299 300 8.654230 TGATCTCTTAGCAACAATTATCTCAC 57.346 34.615 0.00 0.00 0.00 3.51
300 301 9.486497 GATGATCTCTTAGCAACAATTATCTCA 57.514 33.333 0.00 0.00 0.00 3.27
301 302 9.709495 AGATGATCTCTTAGCAACAATTATCTC 57.291 33.333 0.00 0.00 0.00 2.75
306 307 9.896645 TTAGAAGATGATCTCTTAGCAACAATT 57.103 29.630 0.00 0.00 44.42 2.32
308 309 9.896645 AATTAGAAGATGATCTCTTAGCAACAA 57.103 29.630 0.00 0.00 44.42 2.83
352 353 9.965902 AAGCCTAGAAGAGAGAAATCATAAAAA 57.034 29.630 0.00 0.00 0.00 1.94
353 354 9.606631 GAAGCCTAGAAGAGAGAAATCATAAAA 57.393 33.333 0.00 0.00 0.00 1.52
354 355 8.986991 AGAAGCCTAGAAGAGAGAAATCATAAA 58.013 33.333 0.00 0.00 0.00 1.40
355 356 8.546083 AGAAGCCTAGAAGAGAGAAATCATAA 57.454 34.615 0.00 0.00 0.00 1.90
356 357 7.232534 GGAGAAGCCTAGAAGAGAGAAATCATA 59.767 40.741 0.00 0.00 0.00 2.15
357 358 6.041979 GGAGAAGCCTAGAAGAGAGAAATCAT 59.958 42.308 0.00 0.00 0.00 2.45
358 359 5.362430 GGAGAAGCCTAGAAGAGAGAAATCA 59.638 44.000 0.00 0.00 0.00 2.57
359 360 5.362430 TGGAGAAGCCTAGAAGAGAGAAATC 59.638 44.000 0.00 0.00 37.63 2.17
360 361 5.276440 TGGAGAAGCCTAGAAGAGAGAAAT 58.724 41.667 0.00 0.00 37.63 2.17
361 362 4.678256 TGGAGAAGCCTAGAAGAGAGAAA 58.322 43.478 0.00 0.00 37.63 2.52
362 363 4.323569 TGGAGAAGCCTAGAAGAGAGAA 57.676 45.455 0.00 0.00 37.63 2.87
363 364 4.020543 GTTGGAGAAGCCTAGAAGAGAGA 58.979 47.826 0.00 0.00 37.63 3.10
364 365 3.181491 CGTTGGAGAAGCCTAGAAGAGAG 60.181 52.174 0.00 0.00 37.63 3.20
365 366 2.755655 CGTTGGAGAAGCCTAGAAGAGA 59.244 50.000 0.00 0.00 37.63 3.10
366 367 2.755655 TCGTTGGAGAAGCCTAGAAGAG 59.244 50.000 0.00 0.00 37.63 2.85
367 368 2.803956 TCGTTGGAGAAGCCTAGAAGA 58.196 47.619 0.00 0.00 37.63 2.87
368 369 3.516615 CTTCGTTGGAGAAGCCTAGAAG 58.483 50.000 0.00 0.00 40.76 2.85
369 370 3.594603 CTTCGTTGGAGAAGCCTAGAA 57.405 47.619 0.00 0.00 40.76 2.10
377 378 8.701895 ACATAGGATAAATACTTCGTTGGAGAA 58.298 33.333 0.00 0.00 0.00 2.87
378 379 8.246430 ACATAGGATAAATACTTCGTTGGAGA 57.754 34.615 0.00 0.00 0.00 3.71
379 380 8.765219 CAACATAGGATAAATACTTCGTTGGAG 58.235 37.037 7.86 0.00 32.40 3.86
380 381 7.225931 GCAACATAGGATAAATACTTCGTTGGA 59.774 37.037 13.85 0.00 34.64 3.53
381 382 7.011950 TGCAACATAGGATAAATACTTCGTTGG 59.988 37.037 13.85 2.62 34.64 3.77
382 383 7.850982 GTGCAACATAGGATAAATACTTCGTTG 59.149 37.037 10.11 10.11 35.98 4.10
383 384 7.769044 AGTGCAACATAGGATAAATACTTCGTT 59.231 33.333 0.00 0.00 41.43 3.85
384 385 7.272978 AGTGCAACATAGGATAAATACTTCGT 58.727 34.615 0.00 0.00 41.43 3.85
385 386 7.715265 AGTGCAACATAGGATAAATACTTCG 57.285 36.000 0.00 0.00 41.43 3.79
386 387 9.331282 AGAAGTGCAACATAGGATAAATACTTC 57.669 33.333 0.00 0.00 41.43 3.01
394 395 8.253810 GCTATCATAGAAGTGCAACATAGGATA 58.746 37.037 0.00 0.00 41.43 2.59
395 396 7.102346 GCTATCATAGAAGTGCAACATAGGAT 58.898 38.462 0.00 0.00 41.43 3.24
396 397 6.041979 TGCTATCATAGAAGTGCAACATAGGA 59.958 38.462 0.00 0.00 41.43 2.94
397 398 6.146837 GTGCTATCATAGAAGTGCAACATAGG 59.853 42.308 0.00 0.00 41.43 2.57
398 399 6.927936 AGTGCTATCATAGAAGTGCAACATAG 59.072 38.462 0.00 0.00 41.43 2.23
399 400 6.820335 AGTGCTATCATAGAAGTGCAACATA 58.180 36.000 0.00 0.00 41.43 2.29
400 401 5.678583 AGTGCTATCATAGAAGTGCAACAT 58.321 37.500 0.00 0.00 41.43 2.71
401 402 5.089970 AGTGCTATCATAGAAGTGCAACA 57.910 39.130 0.00 0.00 41.43 3.33
402 403 7.225538 ACAATAGTGCTATCATAGAAGTGCAAC 59.774 37.037 0.00 0.00 32.10 4.17
403 404 7.275183 ACAATAGTGCTATCATAGAAGTGCAA 58.725 34.615 0.00 0.00 32.10 4.08
404 405 6.820335 ACAATAGTGCTATCATAGAAGTGCA 58.180 36.000 0.00 0.00 0.00 4.57
405 406 7.867909 TGTACAATAGTGCTATCATAGAAGTGC 59.132 37.037 0.00 0.00 0.00 4.40
406 407 9.920133 ATGTACAATAGTGCTATCATAGAAGTG 57.080 33.333 0.00 0.00 0.00 3.16
407 408 9.920133 CATGTACAATAGTGCTATCATAGAAGT 57.080 33.333 0.00 0.00 0.00 3.01
408 409 8.867935 GCATGTACAATAGTGCTATCATAGAAG 58.132 37.037 11.12 0.00 34.85 2.85
409 410 7.819415 GGCATGTACAATAGTGCTATCATAGAA 59.181 37.037 16.47 0.00 37.70 2.10
410 411 7.179160 AGGCATGTACAATAGTGCTATCATAGA 59.821 37.037 16.47 0.00 37.70 1.98
411 412 7.326454 AGGCATGTACAATAGTGCTATCATAG 58.674 38.462 16.47 0.00 37.70 2.23
412 413 7.244886 AGGCATGTACAATAGTGCTATCATA 57.755 36.000 16.47 0.00 37.70 2.15
413 414 6.119240 AGGCATGTACAATAGTGCTATCAT 57.881 37.500 16.47 0.00 37.70 2.45
414 415 5.551305 AGGCATGTACAATAGTGCTATCA 57.449 39.130 16.47 0.00 37.70 2.15
415 416 5.119279 CGAAGGCATGTACAATAGTGCTATC 59.881 44.000 16.47 13.60 37.70 2.08
416 417 4.991056 CGAAGGCATGTACAATAGTGCTAT 59.009 41.667 16.47 7.71 37.70 2.97
417 418 4.368315 CGAAGGCATGTACAATAGTGCTA 58.632 43.478 16.47 0.00 37.70 3.49
418 419 3.198068 CGAAGGCATGTACAATAGTGCT 58.802 45.455 16.47 0.76 37.70 4.40
419 420 2.286418 GCGAAGGCATGTACAATAGTGC 60.286 50.000 10.12 10.12 39.62 4.40
420 421 2.935849 TGCGAAGGCATGTACAATAGTG 59.064 45.455 0.00 0.00 46.21 2.74
421 422 3.260475 TGCGAAGGCATGTACAATAGT 57.740 42.857 0.00 0.00 46.21 2.12
471 472 8.994170 CGAGACAACATGATCTCTTAGTATAGA 58.006 37.037 17.95 0.00 39.43 1.98
472 473 8.994170 TCGAGACAACATGATCTCTTAGTATAG 58.006 37.037 17.95 6.27 39.43 1.31
473 474 8.904099 TCGAGACAACATGATCTCTTAGTATA 57.096 34.615 17.95 0.00 39.43 1.47
474 475 7.809546 TCGAGACAACATGATCTCTTAGTAT 57.190 36.000 17.95 0.00 39.43 2.12
475 476 7.809546 ATCGAGACAACATGATCTCTTAGTA 57.190 36.000 17.95 5.49 39.43 1.82
476 477 6.707440 ATCGAGACAACATGATCTCTTAGT 57.293 37.500 17.95 0.00 39.43 2.24
477 478 9.127006 CATAATCGAGACAACATGATCTCTTAG 57.873 37.037 17.95 8.20 39.43 2.18
478 479 8.633561 ACATAATCGAGACAACATGATCTCTTA 58.366 33.333 17.95 13.13 39.43 2.10
483 484 6.345329 CGTCACATAATCGAGACAACATGATC 60.345 42.308 0.00 0.00 0.00 2.92
492 493 1.067212 AGCCCGTCACATAATCGAGAC 59.933 52.381 0.00 0.00 0.00 3.36
496 498 3.713288 TCTTAAGCCCGTCACATAATCG 58.287 45.455 0.00 0.00 0.00 3.34
509 511 5.529800 TGATAAAACCGCCTTATCTTAAGCC 59.470 40.000 0.00 0.00 36.91 4.35
516 518 6.619801 AGTGATTGATAAAACCGCCTTATC 57.380 37.500 0.00 0.00 36.64 1.75
522 524 7.803189 CCATGTATAAGTGATTGATAAAACCGC 59.197 37.037 0.00 0.00 0.00 5.68
530 532 7.067859 GCATATGGCCATGTATAAGTGATTGAT 59.932 37.037 29.04 5.23 36.11 2.57
533 535 6.151648 GTGCATATGGCCATGTATAAGTGATT 59.848 38.462 29.04 0.00 43.89 2.57
578 580 2.369257 ATATGCTCCCTCGCACGTGG 62.369 60.000 18.88 7.71 43.61 4.94
623 625 1.593787 CGTGTGACTGGAGGAGCAT 59.406 57.895 0.00 0.00 0.00 3.79
664 666 4.649954 GAAATGCGCGGGCGATCG 62.650 66.667 20.22 11.69 44.10 3.69
814 828 2.038426 TGTGGATGAGACAACGTTGGAT 59.962 45.455 30.34 18.93 0.00 3.41
872 887 3.426117 GATCGATCGGTGCCGGTGT 62.426 63.158 16.41 0.00 40.25 4.16
898 913 1.915078 CGGCCTCATGGTTCCTCCTT 61.915 60.000 0.00 0.00 37.07 3.36
945 960 2.772691 GCATGCAGCTTCAGGGAGC 61.773 63.158 14.21 0.00 43.02 4.70
1291 1306 2.297129 GCCTCACCTCCTCCAGCTT 61.297 63.158 0.00 0.00 0.00 3.74
1520 1535 6.840780 ATCAATAGCAGCCTAGTTTTGTTT 57.159 33.333 0.00 0.00 0.00 2.83
1522 1537 6.434028 TCAAATCAATAGCAGCCTAGTTTTGT 59.566 34.615 0.00 0.00 0.00 2.83
1532 1547 6.967135 TCATCAATCTCAAATCAATAGCAGC 58.033 36.000 0.00 0.00 0.00 5.25
1543 1558 9.820725 ACAAGAACAAATTTCATCAATCTCAAA 57.179 25.926 0.00 0.00 0.00 2.69
1544 1559 9.820725 AACAAGAACAAATTTCATCAATCTCAA 57.179 25.926 0.00 0.00 0.00 3.02
1545 1560 9.467258 GAACAAGAACAAATTTCATCAATCTCA 57.533 29.630 0.00 0.00 0.00 3.27
1567 1582 1.945819 GCGATTCTCCTGCCAAGAACA 60.946 52.381 0.00 0.00 35.68 3.18
1581 1596 1.064654 GCCACCTTCTTGATGCGATTC 59.935 52.381 0.00 0.00 0.00 2.52
1654 1669 1.997874 GGCTGGTGGTGATCTCCCT 60.998 63.158 11.24 0.00 0.00 4.20
1655 1670 1.977293 GAGGCTGGTGGTGATCTCCC 61.977 65.000 11.24 3.34 0.00 4.30
1656 1671 1.524482 GAGGCTGGTGGTGATCTCC 59.476 63.158 6.88 6.88 0.00 3.71
1835 1850 3.914551 AACCGGCTCTGCTCCTCCT 62.915 63.158 0.00 0.00 0.00 3.69
2056 2071 3.151022 GCCGTCCTCCTCCTCCTG 61.151 72.222 0.00 0.00 0.00 3.86
2148 2166 4.292178 CTGGCCTCCGAGATCCGC 62.292 72.222 3.32 0.00 36.84 5.54
2268 2286 7.664082 AAATTCATGTGTAGTTCAGAGAGTG 57.336 36.000 0.00 0.00 0.00 3.51
2333 2359 8.429641 AGTCATGTATAGACCCGATAATTGTTT 58.570 33.333 0.00 0.00 36.68 2.83
2339 2365 6.482524 AGCTAGTCATGTATAGACCCGATAA 58.517 40.000 10.04 0.00 36.68 1.75
2340 2366 6.063496 AGCTAGTCATGTATAGACCCGATA 57.937 41.667 10.04 0.00 36.68 2.92
2366 2392 1.231221 AGCAACGCACGGACATTTAA 58.769 45.000 0.00 0.00 0.00 1.52
2368 2394 1.130373 CATAGCAACGCACGGACATTT 59.870 47.619 0.00 0.00 0.00 2.32
2369 2395 0.726827 CATAGCAACGCACGGACATT 59.273 50.000 0.00 0.00 0.00 2.71
2370 2396 1.089481 CCATAGCAACGCACGGACAT 61.089 55.000 0.00 0.00 0.00 3.06
2371 2397 1.739929 CCATAGCAACGCACGGACA 60.740 57.895 0.00 0.00 0.00 4.02
2373 2399 1.153647 CTCCATAGCAACGCACGGA 60.154 57.895 0.00 0.00 0.00 4.69
2374 2400 0.179121 TACTCCATAGCAACGCACGG 60.179 55.000 0.00 0.00 0.00 4.94
2522 2550 0.608130 AGGCAGCGATGTTCAGTACA 59.392 50.000 1.22 0.00 41.97 2.90
2576 2604 3.710209 ATGCTTGAAGGTAGTGCTCTT 57.290 42.857 0.00 0.00 0.00 2.85
2845 4825 7.438459 ACAGGCGTATATTTCTTGTTCTCATAC 59.562 37.037 0.00 0.00 0.00 2.39
2869 4849 2.828520 TGTCAAGGCAAAGGTTGAAACA 59.171 40.909 0.00 0.00 34.52 2.83
2886 4866 7.543756 TCTTACGAAGATATGTGATGTTGTCA 58.456 34.615 0.00 0.00 31.20 3.58
2923 4906 0.804364 CGCTTGCTGCATCAAACCTA 59.196 50.000 1.84 0.00 43.06 3.08
2952 4935 7.701539 ATATGTTCATGTTTTGCTAGGTGAA 57.298 32.000 0.00 0.00 0.00 3.18
3019 5003 6.428771 GTCCTAACTTTATGTTGTACTTGCCA 59.571 38.462 0.00 0.00 39.55 4.92
3025 5009 6.058553 AGGGGTCCTAACTTTATGTTGTAC 57.941 41.667 0.00 0.00 39.55 2.90
3044 5028 1.004044 GCATCCAGATATGGTGAGGGG 59.996 57.143 6.21 0.00 0.00 4.79
3164 5148 4.320057 GCATGCAGTCTACATTGCTTATCC 60.320 45.833 14.21 0.00 40.87 2.59
3269 5265 1.600413 GGCTGCTTTCTTTGGTGTTCG 60.600 52.381 0.00 0.00 0.00 3.95
3276 5272 4.050852 AGAAACTTGGCTGCTTTCTTTG 57.949 40.909 8.33 0.00 31.52 2.77
3733 5730 1.306226 CGGAACCTCCCCTTCCTCT 60.306 63.158 0.00 0.00 35.86 3.69
3778 5775 4.504916 CCGACGGGAGCAGCTCTG 62.505 72.222 21.99 16.48 34.06 3.35
3792 5789 2.933287 AATCTGGGTGGTGGCCGA 60.933 61.111 0.00 0.00 0.00 5.54
3877 6826 6.011981 TGGGACAGAGGGACTATTTACAAAAT 60.012 38.462 0.00 0.00 41.55 1.82
3944 6893 1.210931 CGGACAAGCTGTGGCAATG 59.789 57.895 0.00 0.00 36.72 2.82
3978 6927 6.166984 TCCATCACTTCTGACCATTAGATC 57.833 41.667 0.00 0.00 0.00 2.75
4177 7130 7.067372 TCTGTTCTTGTTCTGAAAATCACACAT 59.933 33.333 0.00 0.00 0.00 3.21
4291 7244 3.930336 TGAAGAACAAGATGAGCATCGT 58.070 40.909 4.93 0.00 42.48 3.73
4357 7310 0.038599 TCACAGGGCAGCATCAATGT 59.961 50.000 0.00 0.00 0.00 2.71
4358 7311 1.179152 TTCACAGGGCAGCATCAATG 58.821 50.000 0.00 0.00 0.00 2.82
4359 7312 2.154567 ATTCACAGGGCAGCATCAAT 57.845 45.000 0.00 0.00 0.00 2.57
4360 7313 1.927487 AATTCACAGGGCAGCATCAA 58.073 45.000 0.00 0.00 0.00 2.57
4394 7348 2.758327 ATCGCTGCACCCCGTAGA 60.758 61.111 0.00 0.00 0.00 2.59
4507 7461 7.941431 TGAAAGGGAAAGTAACAAGTAAACA 57.059 32.000 0.00 0.00 0.00 2.83
4508 7462 9.642327 TTTTGAAAGGGAAAGTAACAAGTAAAC 57.358 29.630 0.00 0.00 0.00 2.01
4516 7470 6.292649 CGCCAAATTTTGAAAGGGAAAGTAAC 60.293 38.462 10.72 0.00 0.00 2.50
4531 7485 2.823747 GAGTACCTTCCCGCCAAATTTT 59.176 45.455 0.00 0.00 0.00 1.82
4575 7529 7.451501 TGCACAGTCAATTATTTCTCATTCA 57.548 32.000 0.00 0.00 0.00 2.57
4644 7598 8.651389 TCTTCTCTTGTTCTTTATCCTTTCTCA 58.349 33.333 0.00 0.00 0.00 3.27
4648 7602 9.500785 CTCTTCTTCTCTTGTTCTTTATCCTTT 57.499 33.333 0.00 0.00 0.00 3.11
4654 7608 8.239038 TCTGTCTCTTCTTCTCTTGTTCTTTA 57.761 34.615 0.00 0.00 0.00 1.85
4734 7688 5.574891 AAAAACATCTGTACTTGTGCACA 57.425 34.783 17.42 17.42 0.00 4.57
4814 7772 9.729023 TTTTGGACGCATGAATTTTACTATATG 57.271 29.630 0.00 0.00 0.00 1.78
4823 7781 4.389687 GCTCATTTTTGGACGCATGAATTT 59.610 37.500 0.00 0.00 0.00 1.82
4908 7866 2.426023 GCAACCGGTGACTCCACT 59.574 61.111 8.52 0.00 42.77 4.00
4978 7936 2.168106 AGACGATCATCTTCTTGCTGCT 59.832 45.455 0.00 0.00 0.00 4.24
4998 7956 2.075979 ATGACGATGATGATGCCGAG 57.924 50.000 0.00 0.00 0.00 4.63
5013 7974 1.009829 GCCTCGGTGATGACAATGAC 58.990 55.000 0.00 0.00 0.00 3.06
5025 7986 2.351276 GGTGTGATTGGCCTCGGT 59.649 61.111 3.32 0.00 0.00 4.69
5080 8041 1.807755 CGACACCATCTGCCGATCATT 60.808 52.381 0.00 0.00 0.00 2.57
5086 8047 3.190849 CTGCGACACCATCTGCCG 61.191 66.667 0.00 0.00 0.00 5.69
5124 8085 1.229428 CACAGGACATTGCGTGAACT 58.771 50.000 7.46 0.00 0.00 3.01
5140 8101 3.153919 GAGCAAATTACCCCAGAACACA 58.846 45.455 0.00 0.00 0.00 3.72
5154 8115 3.160269 CTCCCTCCAACTTTGAGCAAAT 58.840 45.455 0.00 0.00 0.00 2.32
5194 8155 3.134574 ACTTTGCCATTCACCGTTCTA 57.865 42.857 0.00 0.00 0.00 2.10
5204 8165 2.607180 GACACGCAAAAACTTTGCCATT 59.393 40.909 16.25 2.94 42.10 3.16
5382 8345 0.179084 GGCTACCATTCTAGCACGCA 60.179 55.000 0.93 0.00 40.96 5.24
5403 8367 7.492077 AAGTAGCTAGCTAGGGTTTTTAAGA 57.508 36.000 24.78 0.00 0.00 2.10
5451 8416 2.296365 CCAGAGGGCAAGCAGAGGA 61.296 63.158 0.00 0.00 0.00 3.71
5455 8420 3.060615 GCACCAGAGGGCAAGCAG 61.061 66.667 0.00 0.00 37.90 4.24
5463 8428 1.732259 GTTGTCGTAATGCACCAGAGG 59.268 52.381 0.00 0.00 0.00 3.69
5485 8450 1.143684 AGAAAGAAGCAAGCAGGTGGA 59.856 47.619 0.00 0.00 0.00 4.02
5488 8453 2.355010 ACAGAAAGAAGCAAGCAGGT 57.645 45.000 0.00 0.00 0.00 4.00
5526 8491 1.340991 TGCTAAGCAAGGGTTGGGATC 60.341 52.381 0.00 0.00 34.76 3.36
5579 8545 3.680642 CATTCTTCATGGTTAGGCACG 57.319 47.619 0.00 0.00 0.00 5.34
5604 8570 7.090173 GGCCGTGCACATGAAATAAAATATAT 58.910 34.615 18.64 0.00 0.00 0.86
5623 8589 6.231211 ACATTCTTTATAAGATAGGGCCGTG 58.769 40.000 8.57 0.00 37.38 4.94
5673 8639 2.175202 TGTGTTGCTGGTTGGTCTTTT 58.825 42.857 0.00 0.00 0.00 2.27
5757 8727 0.522626 CCGTCATTGCATGCACTTCA 59.477 50.000 22.58 5.97 0.00 3.02
5792 8762 3.361977 GGCCCGACACGCACAATT 61.362 61.111 0.00 0.00 0.00 2.32
5890 8860 3.366052 ACCTTGGATTTCTGGCGTAAT 57.634 42.857 0.00 0.00 0.00 1.89
6011 8981 2.203773 GGCAAAAGGGAAGGGGCA 60.204 61.111 0.00 0.00 0.00 5.36
6052 9022 3.207778 TCGATCCGCGGGATTTTAAAAT 58.792 40.909 27.83 13.24 43.27 1.82
6055 9025 2.206750 CTTCGATCCGCGGGATTTTAA 58.793 47.619 27.83 11.45 43.27 1.52
6058 9028 1.227556 CCTTCGATCCGCGGGATTT 60.228 57.895 27.83 8.01 43.27 2.17
6070 9040 3.028094 ACTACCTGCCTAATCCTTCGA 57.972 47.619 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.