Multiple sequence alignment - TraesCS6B01G111200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G111200 chr6B 100.000 5571 0 0 1 5571 93412361 93417931 0.000000e+00 10288.0
1 TraesCS6B01G111200 chr6A 94.516 2334 58 21 783 3079 57662899 57665199 0.000000e+00 3537.0
2 TraesCS6B01G111200 chr6A 96.807 877 19 4 3078 3953 57665281 57666149 0.000000e+00 1456.0
3 TraesCS6B01G111200 chr6A 95.552 562 21 3 4402 4962 57667200 57667758 0.000000e+00 896.0
4 TraesCS6B01G111200 chr6A 82.423 1007 110 41 1269 2230 466226819 466225835 0.000000e+00 817.0
5 TraesCS6B01G111200 chr6A 92.842 461 24 6 5115 5569 57668163 57668620 0.000000e+00 660.0
6 TraesCS6B01G111200 chr6A 98.618 217 3 0 3951 4167 57666733 57666949 8.750000e-103 385.0
7 TraesCS6B01G111200 chr6A 92.929 99 5 2 4284 4382 57667108 57667204 5.820000e-30 143.0
8 TraesCS6B01G111200 chr6A 83.673 98 12 4 5 100 57660678 57660773 7.690000e-14 89.8
9 TraesCS6B01G111200 chrUn 96.849 2031 43 7 1816 3838 19486743 19484726 0.000000e+00 3376.0
10 TraesCS6B01G111200 chrUn 94.887 1643 49 16 3948 5571 19484719 19483093 0.000000e+00 2536.0
11 TraesCS6B01G111200 chrUn 92.365 1074 51 17 776 1833 19487824 19486766 0.000000e+00 1500.0
12 TraesCS6B01G111200 chr3A 80.677 1004 120 41 1269 2231 699556755 699557725 0.000000e+00 712.0
13 TraesCS6B01G111200 chr7A 83.703 632 76 16 1619 2234 185925970 185925350 6.260000e-159 571.0
14 TraesCS6B01G111200 chr3D 76.662 797 126 37 2534 3300 20746248 20745482 2.430000e-103 387.0
15 TraesCS6B01G111200 chr1B 76.339 803 124 42 2534 3300 167608177 167608949 2.450000e-98 370.0
16 TraesCS6B01G111200 chr5B 79.277 415 51 22 2893 3300 311523259 311523645 1.990000e-64 257.0
17 TraesCS6B01G111200 chr5A 78.908 403 60 19 2297 2696 632447850 632447470 3.330000e-62 250.0
18 TraesCS6B01G111200 chr7B 95.556 45 2 0 734 778 642517893 642517937 7.740000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G111200 chr6B 93412361 93417931 5570 False 10288.000000 10288 100.000000 1 5571 1 chr6B.!!$F1 5570
1 TraesCS6B01G111200 chr6A 57660678 57668620 7942 False 1023.828571 3537 93.562429 5 5569 7 chr6A.!!$F1 5564
2 TraesCS6B01G111200 chr6A 466225835 466226819 984 True 817.000000 817 82.423000 1269 2230 1 chr6A.!!$R1 961
3 TraesCS6B01G111200 chrUn 19483093 19487824 4731 True 2470.666667 3376 94.700333 776 5571 3 chrUn.!!$R1 4795
4 TraesCS6B01G111200 chr3A 699556755 699557725 970 False 712.000000 712 80.677000 1269 2231 1 chr3A.!!$F1 962
5 TraesCS6B01G111200 chr7A 185925350 185925970 620 True 571.000000 571 83.703000 1619 2234 1 chr7A.!!$R1 615
6 TraesCS6B01G111200 chr3D 20745482 20746248 766 True 387.000000 387 76.662000 2534 3300 1 chr3D.!!$R1 766
7 TraesCS6B01G111200 chr1B 167608177 167608949 772 False 370.000000 370 76.339000 2534 3300 1 chr1B.!!$F1 766

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
559 2316 0.033208 TGGGACATTGATTCCTGCCC 60.033 55.000 0.00 0.00 33.17 5.36 F
633 2390 0.101759 CTTTCTTGCCATGCGGGATG 59.898 55.000 2.07 2.07 40.01 3.51 F
647 2404 0.105039 GGGATGAAGCGATCGAGGTT 59.895 55.000 21.57 8.47 34.19 3.50 F
655 2412 0.708918 GCGATCGAGGTTATTAGCGC 59.291 55.000 21.57 0.00 36.35 5.92 F
1523 3309 1.362406 GCTAGAACTTCGCTGTGGCC 61.362 60.000 0.00 0.00 34.44 5.36 F
1803 3617 0.532573 AGACACGATGCGAATCAGGT 59.467 50.000 3.80 0.00 0.00 4.00 F
3288 5277 1.203440 AGCCCTAAGAAGACCCTGGAA 60.203 52.381 0.00 0.00 0.00 3.53 F
4113 6689 0.326264 ATGCTGGTGTGAAGGACTCC 59.674 55.000 0.00 0.00 38.52 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1601 3387 2.455674 TTTATGCTCGCACTGTGACT 57.544 45.000 12.86 0.00 0.00 3.41 R
1604 3390 2.595536 GCAATTTTATGCTCGCACTGTG 59.404 45.455 2.76 2.76 43.06 3.66 R
1605 3391 2.867429 GCAATTTTATGCTCGCACTGT 58.133 42.857 0.00 0.00 43.06 3.55 R
1769 3583 3.133691 CGTGTCTAATGACCCCATGATG 58.866 50.000 0.00 0.00 42.28 3.07 R
3288 5277 1.192146 TCAGACCGGCTAAAGCACCT 61.192 55.000 0.00 0.00 44.36 4.00 R
3488 5477 8.024145 TGGTACAATTTTGTTCACCCTAAAAT 57.976 30.769 11.16 0.00 38.46 1.82 R
4188 6764 0.522180 GGTCTCACGTCTCGACACAT 59.478 55.000 9.69 0.00 0.00 3.21 R
5097 8075 0.533755 CATCTCATCAAGGCCCCGTC 60.534 60.000 0.00 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 3.503827 CATCACTGCAATTGAGCACAT 57.496 42.857 10.34 0.00 40.11 3.21
50 51 4.625972 CATCACTGCAATTGAGCACATA 57.374 40.909 10.34 0.00 40.11 2.29
52 53 3.678289 TCACTGCAATTGAGCACATACT 58.322 40.909 10.34 0.00 40.11 2.12
58 59 6.037940 ACTGCAATTGAGCACATACTGATAAG 59.962 38.462 10.34 0.00 40.11 1.73
66 67 3.003689 GCACATACTGATAAGCCGCAAAT 59.996 43.478 0.00 0.00 0.00 2.32
68 69 4.273235 CACATACTGATAAGCCGCAAATCA 59.727 41.667 7.27 7.27 0.00 2.57
70 71 5.532406 ACATACTGATAAGCCGCAAATCATT 59.468 36.000 7.80 5.85 0.00 2.57
71 72 4.558538 ACTGATAAGCCGCAAATCATTC 57.441 40.909 7.80 0.00 0.00 2.67
72 73 4.202441 ACTGATAAGCCGCAAATCATTCT 58.798 39.130 7.80 0.00 0.00 2.40
75 76 2.927553 AAGCCGCAAATCATTCTGTC 57.072 45.000 0.00 0.00 0.00 3.51
76 77 2.119801 AGCCGCAAATCATTCTGTCT 57.880 45.000 0.00 0.00 0.00 3.41
78 79 1.267732 GCCGCAAATCATTCTGTCTCG 60.268 52.381 0.00 0.00 0.00 4.04
100 147 3.501445 GGCATGCCTTCTCAAGATCATAC 59.499 47.826 29.98 0.00 0.00 2.39
103 150 4.412796 TGCCTTCTCAAGATCATACCTG 57.587 45.455 0.00 0.00 0.00 4.00
104 151 3.776969 TGCCTTCTCAAGATCATACCTGT 59.223 43.478 0.00 0.00 0.00 4.00
107 154 4.098654 CCTTCTCAAGATCATACCTGTCGT 59.901 45.833 0.00 0.00 0.00 4.34
109 156 5.752892 TCTCAAGATCATACCTGTCGTAC 57.247 43.478 0.00 0.00 0.00 3.67
116 163 5.652891 AGATCATACCTGTCGTACTTGAGTT 59.347 40.000 0.00 0.00 0.00 3.01
126 173 3.624861 TCGTACTTGAGTTATCCGACTCC 59.375 47.826 2.89 0.00 44.29 3.85
131 178 5.617252 ACTTGAGTTATCCGACTCCAAAAA 58.383 37.500 2.89 0.00 44.29 1.94
132 179 5.701290 ACTTGAGTTATCCGACTCCAAAAAG 59.299 40.000 2.89 2.94 44.29 2.27
133 180 4.575885 TGAGTTATCCGACTCCAAAAAGG 58.424 43.478 2.89 0.00 44.29 3.11
147 194 3.563808 CCAAAAAGGAGTCATCAACACGA 59.436 43.478 0.00 0.00 41.22 4.35
149 196 5.278463 CCAAAAAGGAGTCATCAACACGATT 60.278 40.000 0.00 0.00 41.22 3.34
151 198 5.362556 AAAGGAGTCATCAACACGATTTG 57.637 39.130 0.00 0.00 29.21 2.32
152 199 4.271696 AGGAGTCATCAACACGATTTGA 57.728 40.909 6.03 6.03 39.79 2.69
153 200 4.248859 AGGAGTCATCAACACGATTTGAG 58.751 43.478 8.90 3.23 38.87 3.02
168 216 1.778334 TTGAGACATCGACACAACCG 58.222 50.000 0.00 0.00 0.00 4.44
169 217 0.038618 TGAGACATCGACACAACCGG 60.039 55.000 0.00 0.00 0.00 5.28
172 220 0.244450 GACATCGACACAACCGGGTA 59.756 55.000 6.32 0.00 0.00 3.69
173 221 0.899720 ACATCGACACAACCGGGTAT 59.100 50.000 6.32 0.00 0.00 2.73
174 222 1.286501 CATCGACACAACCGGGTATG 58.713 55.000 6.32 0.00 0.00 2.39
175 223 1.134936 CATCGACACAACCGGGTATGA 60.135 52.381 3.82 0.00 0.00 2.15
176 224 1.187974 TCGACACAACCGGGTATGAT 58.812 50.000 3.82 0.00 0.00 2.45
177 225 1.134936 TCGACACAACCGGGTATGATG 60.135 52.381 3.82 0.00 0.00 3.07
180 228 3.541632 GACACAACCGGGTATGATGAAT 58.458 45.455 3.82 0.00 0.00 2.57
181 229 4.699637 GACACAACCGGGTATGATGAATA 58.300 43.478 3.82 0.00 0.00 1.75
182 230 5.304686 ACACAACCGGGTATGATGAATAT 57.695 39.130 3.82 0.00 0.00 1.28
184 232 6.126409 ACACAACCGGGTATGATGAATATTT 58.874 36.000 3.82 0.00 0.00 1.40
185 233 6.605594 ACACAACCGGGTATGATGAATATTTT 59.394 34.615 3.82 0.00 0.00 1.82
186 234 7.123547 ACACAACCGGGTATGATGAATATTTTT 59.876 33.333 3.82 0.00 0.00 1.94
220 926 9.491934 GTATTCTATGTAGTATGTAGCATGACG 57.508 37.037 0.00 0.00 0.00 4.35
281 1622 4.216411 ACTCGTACATGCCCTAAATGTT 57.784 40.909 0.00 0.00 39.05 2.71
309 1650 6.026947 AGATTTCAAACTACTCGCTAGTGT 57.973 37.500 0.22 0.00 35.70 3.55
314 1655 6.520792 TCAAACTACTCGCTAGTGTTTTTC 57.479 37.500 12.78 0.00 36.08 2.29
315 1656 5.464389 TCAAACTACTCGCTAGTGTTTTTCC 59.536 40.000 12.78 0.00 36.08 3.13
316 1657 3.922910 ACTACTCGCTAGTGTTTTTCCC 58.077 45.455 0.22 0.00 36.36 3.97
317 1658 2.180432 ACTCGCTAGTGTTTTTCCCC 57.820 50.000 2.66 0.00 33.57 4.81
318 1659 1.076332 CTCGCTAGTGTTTTTCCCCG 58.924 55.000 2.66 0.00 0.00 5.73
319 1660 0.952010 TCGCTAGTGTTTTTCCCCGC 60.952 55.000 2.66 0.00 0.00 6.13
320 1661 0.953960 CGCTAGTGTTTTTCCCCGCT 60.954 55.000 0.00 0.00 0.00 5.52
322 1663 2.007608 GCTAGTGTTTTTCCCCGCTAG 58.992 52.381 0.00 0.00 42.16 3.42
325 2080 1.144298 AGTGTTTTTCCCCGCTAGGTT 59.856 47.619 0.00 0.00 35.12 3.50
337 2092 1.429463 GCTAGGTTGACGTTCAGTGG 58.571 55.000 0.00 0.00 0.00 4.00
338 2093 1.270147 GCTAGGTTGACGTTCAGTGGT 60.270 52.381 0.00 0.00 0.00 4.16
340 2095 0.106149 AGGTTGACGTTCAGTGGTCC 59.894 55.000 0.00 0.00 32.19 4.46
341 2096 0.106149 GGTTGACGTTCAGTGGTCCT 59.894 55.000 0.00 0.00 32.19 3.85
363 2118 5.835819 CCTTCCCTCCTTTTTCTTTCTTTCT 59.164 40.000 0.00 0.00 0.00 2.52
364 2119 6.239148 CCTTCCCTCCTTTTTCTTTCTTTCTG 60.239 42.308 0.00 0.00 0.00 3.02
368 2123 5.830457 CCTCCTTTTTCTTTCTTTCTGTCCT 59.170 40.000 0.00 0.00 0.00 3.85
379 2134 5.986501 TCTTTCTGTCCTTCTACCTTCTC 57.013 43.478 0.00 0.00 0.00 2.87
406 2161 3.423749 TCTTCCTCAAGCATGCATTTCA 58.576 40.909 21.98 0.00 0.00 2.69
409 2164 2.094390 TCCTCAAGCATGCATTTCAAGC 60.094 45.455 21.98 0.00 39.53 4.01
413 2168 0.108329 AGCATGCATTTCAAGCTGGC 60.108 50.000 21.98 0.00 46.71 4.85
414 2169 1.418342 GCATGCATTTCAAGCTGGCG 61.418 55.000 14.21 0.00 36.54 5.69
423 2179 1.597854 CAAGCTGGCGTGAGGTGAA 60.598 57.895 2.53 0.00 0.00 3.18
424 2180 1.598130 AAGCTGGCGTGAGGTGAAC 60.598 57.895 0.00 0.00 0.00 3.18
431 2187 1.670674 GGCGTGAGGTGAACGTCATAA 60.671 52.381 8.88 0.00 44.75 1.90
473 2230 9.974980 AACAATAATTTTGTTTTCATAGGTCGT 57.025 25.926 10.86 0.00 39.36 4.34
490 2247 2.279741 TCGTAAGAGCATGTCCAATGC 58.720 47.619 2.07 2.07 45.01 3.56
491 2248 2.009051 CGTAAGAGCATGTCCAATGCA 58.991 47.619 12.44 0.00 46.77 3.96
492 2249 2.223112 CGTAAGAGCATGTCCAATGCAC 60.223 50.000 12.44 6.38 46.77 4.57
493 2250 0.806868 AAGAGCATGTCCAATGCACG 59.193 50.000 12.44 0.00 46.77 5.34
494 2251 1.226491 GAGCATGTCCAATGCACGC 60.226 57.895 12.44 0.00 46.77 5.34
495 2252 1.651240 GAGCATGTCCAATGCACGCT 61.651 55.000 12.44 0.00 46.77 5.07
496 2253 1.226491 GCATGTCCAATGCACGCTC 60.226 57.895 5.46 0.00 44.00 5.03
497 2254 1.651240 GCATGTCCAATGCACGCTCT 61.651 55.000 5.46 0.00 44.00 4.09
498 2255 1.655484 CATGTCCAATGCACGCTCTA 58.345 50.000 0.00 0.00 0.00 2.43
499 2256 1.596260 CATGTCCAATGCACGCTCTAG 59.404 52.381 0.00 0.00 0.00 2.43
500 2257 0.608130 TGTCCAATGCACGCTCTAGT 59.392 50.000 0.00 0.00 0.00 2.57
501 2258 1.002366 GTCCAATGCACGCTCTAGTG 58.998 55.000 0.00 0.00 44.47 2.74
502 2259 0.894835 TCCAATGCACGCTCTAGTGA 59.105 50.000 0.88 0.00 44.43 3.41
503 2260 1.275010 TCCAATGCACGCTCTAGTGAA 59.725 47.619 0.88 0.00 44.43 3.18
504 2261 1.662629 CCAATGCACGCTCTAGTGAAG 59.337 52.381 0.88 0.00 44.43 3.02
505 2262 2.610433 CAATGCACGCTCTAGTGAAGA 58.390 47.619 0.88 0.00 44.43 2.87
513 2270 2.842208 CTCTAGTGAAGAGGCGTCAG 57.158 55.000 9.41 0.00 46.98 3.51
514 2271 1.403679 CTCTAGTGAAGAGGCGTCAGG 59.596 57.143 9.41 0.00 46.98 3.86
515 2272 1.004394 TCTAGTGAAGAGGCGTCAGGA 59.996 52.381 9.41 0.00 0.00 3.86
516 2273 2.028130 CTAGTGAAGAGGCGTCAGGAT 58.972 52.381 9.41 0.00 0.00 3.24
517 2274 0.534412 AGTGAAGAGGCGTCAGGATG 59.466 55.000 9.41 0.00 37.54 3.51
518 2275 0.460987 GTGAAGAGGCGTCAGGATGG 60.461 60.000 9.41 0.00 36.16 3.51
519 2276 0.614697 TGAAGAGGCGTCAGGATGGA 60.615 55.000 9.41 0.00 36.16 3.41
520 2277 0.179097 GAAGAGGCGTCAGGATGGAC 60.179 60.000 9.41 0.00 36.16 4.02
521 2278 0.904865 AAGAGGCGTCAGGATGGACA 60.905 55.000 9.41 0.00 37.66 4.02
522 2279 0.689080 AGAGGCGTCAGGATGGACAT 60.689 55.000 9.41 0.00 37.66 3.06
523 2280 0.249657 GAGGCGTCAGGATGGACATC 60.250 60.000 0.52 3.72 37.66 3.06
535 2292 4.644103 GATGGACATCCTGTTTGATTGG 57.356 45.455 0.80 0.00 36.82 3.16
536 2293 2.170166 TGGACATCCTGTTTGATTGGC 58.830 47.619 0.00 0.00 36.82 4.52
537 2294 2.170166 GGACATCCTGTTTGATTGGCA 58.830 47.619 0.00 0.00 0.00 4.92
538 2295 2.165030 GGACATCCTGTTTGATTGGCAG 59.835 50.000 0.00 0.00 0.00 4.85
539 2296 2.821969 GACATCCTGTTTGATTGGCAGT 59.178 45.455 0.00 0.00 0.00 4.40
540 2297 3.233507 ACATCCTGTTTGATTGGCAGTT 58.766 40.909 0.00 0.00 0.00 3.16
541 2298 3.006110 ACATCCTGTTTGATTGGCAGTTG 59.994 43.478 0.00 0.00 0.00 3.16
542 2299 1.962807 TCCTGTTTGATTGGCAGTTGG 59.037 47.619 0.00 0.00 0.00 3.77
543 2300 1.001181 CCTGTTTGATTGGCAGTTGGG 59.999 52.381 0.00 0.00 0.00 4.12
544 2301 1.962807 CTGTTTGATTGGCAGTTGGGA 59.037 47.619 0.00 0.00 0.00 4.37
545 2302 1.686052 TGTTTGATTGGCAGTTGGGAC 59.314 47.619 0.00 0.00 0.00 4.46
546 2303 1.686052 GTTTGATTGGCAGTTGGGACA 59.314 47.619 0.00 0.00 0.00 4.02
547 2304 2.299867 GTTTGATTGGCAGTTGGGACAT 59.700 45.455 0.00 0.00 39.30 3.06
548 2305 2.307496 TGATTGGCAGTTGGGACATT 57.693 45.000 0.00 0.00 39.30 2.71
549 2306 1.894466 TGATTGGCAGTTGGGACATTG 59.106 47.619 0.00 0.00 39.30 2.82
550 2307 2.170166 GATTGGCAGTTGGGACATTGA 58.830 47.619 0.00 0.00 39.30 2.57
551 2308 2.307496 TTGGCAGTTGGGACATTGAT 57.693 45.000 0.00 0.00 39.30 2.57
552 2309 2.307496 TGGCAGTTGGGACATTGATT 57.693 45.000 0.00 0.00 39.30 2.57
553 2310 2.170166 TGGCAGTTGGGACATTGATTC 58.830 47.619 0.00 0.00 39.30 2.52
554 2311 1.478105 GGCAGTTGGGACATTGATTCC 59.522 52.381 0.00 0.00 39.30 3.01
555 2312 2.450476 GCAGTTGGGACATTGATTCCT 58.550 47.619 0.00 0.00 39.30 3.36
556 2313 2.165030 GCAGTTGGGACATTGATTCCTG 59.835 50.000 0.00 0.00 39.30 3.86
557 2314 2.165030 CAGTTGGGACATTGATTCCTGC 59.835 50.000 0.00 0.00 39.30 4.85
558 2315 1.478105 GTTGGGACATTGATTCCTGCC 59.522 52.381 0.00 0.00 39.30 4.85
559 2316 0.033208 TGGGACATTGATTCCTGCCC 60.033 55.000 0.00 0.00 33.17 5.36
560 2317 1.103398 GGGACATTGATTCCTGCCCG 61.103 60.000 0.00 0.00 33.17 6.13
561 2318 0.107214 GGACATTGATTCCTGCCCGA 60.107 55.000 0.00 0.00 0.00 5.14
562 2319 1.477558 GGACATTGATTCCTGCCCGAT 60.478 52.381 0.00 0.00 0.00 4.18
563 2320 2.301346 GACATTGATTCCTGCCCGATT 58.699 47.619 0.00 0.00 0.00 3.34
564 2321 2.291741 GACATTGATTCCTGCCCGATTC 59.708 50.000 0.00 0.00 0.00 2.52
565 2322 1.610522 CATTGATTCCTGCCCGATTCC 59.389 52.381 0.00 0.00 0.00 3.01
566 2323 0.918983 TTGATTCCTGCCCGATTCCT 59.081 50.000 0.00 0.00 0.00 3.36
567 2324 0.181114 TGATTCCTGCCCGATTCCTG 59.819 55.000 0.00 0.00 0.00 3.86
568 2325 0.536006 GATTCCTGCCCGATTCCTGG 60.536 60.000 0.00 0.00 0.00 4.45
589 2346 4.662961 CAGGTGTGGCTCGACGCA 62.663 66.667 8.71 0.00 41.67 5.24
590 2347 3.923864 AGGTGTGGCTCGACGCAA 61.924 61.111 8.71 0.00 41.67 4.85
591 2348 2.742372 GGTGTGGCTCGACGCAAT 60.742 61.111 8.71 0.00 41.67 3.56
592 2349 1.447140 GGTGTGGCTCGACGCAATA 60.447 57.895 8.71 0.00 41.67 1.90
593 2350 1.017177 GGTGTGGCTCGACGCAATAA 61.017 55.000 8.71 0.00 41.67 1.40
594 2351 0.793861 GTGTGGCTCGACGCAATAAA 59.206 50.000 8.71 0.00 41.67 1.40
595 2352 1.195900 GTGTGGCTCGACGCAATAAAA 59.804 47.619 8.71 0.00 41.67 1.52
596 2353 1.874231 TGTGGCTCGACGCAATAAAAA 59.126 42.857 8.71 0.00 41.67 1.94
597 2354 2.095969 TGTGGCTCGACGCAATAAAAAG 60.096 45.455 8.71 0.00 41.67 2.27
598 2355 1.135803 TGGCTCGACGCAATAAAAAGC 60.136 47.619 8.71 0.00 41.67 3.51
599 2356 1.135803 GGCTCGACGCAATAAAAAGCA 60.136 47.619 8.71 0.00 41.67 3.91
600 2357 2.477863 GGCTCGACGCAATAAAAAGCAT 60.478 45.455 8.71 0.00 41.67 3.79
601 2358 2.778386 GCTCGACGCAATAAAAAGCATC 59.222 45.455 0.00 0.00 38.92 3.91
602 2359 3.022284 CTCGACGCAATAAAAAGCATCG 58.978 45.455 0.00 0.00 46.35 3.84
605 2362 2.778386 GACGCAATAAAAAGCATCGAGC 59.222 45.455 0.00 0.00 46.19 5.03
619 2376 4.416738 GAGCGCCTGGGCCTTTCT 62.417 66.667 2.29 0.00 37.98 2.52
620 2377 3.927481 GAGCGCCTGGGCCTTTCTT 62.927 63.158 2.29 0.00 37.98 2.52
621 2378 3.752339 GCGCCTGGGCCTTTCTTG 61.752 66.667 4.53 0.00 37.98 3.02
622 2379 3.752339 CGCCTGGGCCTTTCTTGC 61.752 66.667 4.53 0.00 37.98 4.01
629 2386 2.182537 GCCTTTCTTGCCATGCGG 59.817 61.111 0.00 0.00 0.00 5.69
630 2387 2.887360 CCTTTCTTGCCATGCGGG 59.113 61.111 0.00 0.00 40.85 6.13
631 2388 1.678635 CCTTTCTTGCCATGCGGGA 60.679 57.895 0.00 0.00 40.01 5.14
632 2389 1.039233 CCTTTCTTGCCATGCGGGAT 61.039 55.000 0.00 0.00 40.01 3.85
633 2390 0.101759 CTTTCTTGCCATGCGGGATG 59.898 55.000 2.07 2.07 40.01 3.51
634 2391 0.323269 TTTCTTGCCATGCGGGATGA 60.323 50.000 11.37 0.00 40.01 2.92
635 2392 0.323269 TTCTTGCCATGCGGGATGAA 60.323 50.000 11.37 0.00 42.25 2.57
636 2393 0.749091 TCTTGCCATGCGGGATGAAG 60.749 55.000 11.37 7.71 40.01 3.02
637 2394 2.345880 CTTGCCATGCGGGATGAAGC 62.346 60.000 11.37 7.37 40.01 3.86
638 2395 3.957535 GCCATGCGGGATGAAGCG 61.958 66.667 11.37 0.00 40.01 4.68
639 2396 2.203056 CCATGCGGGATGAAGCGA 60.203 61.111 11.37 0.00 40.01 4.93
640 2397 1.598962 CCATGCGGGATGAAGCGAT 60.599 57.895 11.37 0.00 40.01 4.58
641 2398 1.572085 CCATGCGGGATGAAGCGATC 61.572 60.000 11.37 0.00 40.01 3.69
642 2399 1.665916 ATGCGGGATGAAGCGATCG 60.666 57.895 11.69 11.69 35.87 3.69
643 2400 2.027605 GCGGGATGAAGCGATCGA 59.972 61.111 21.57 0.00 0.00 3.59
644 2401 2.018866 GCGGGATGAAGCGATCGAG 61.019 63.158 21.57 0.00 0.00 4.04
645 2402 1.372251 CGGGATGAAGCGATCGAGG 60.372 63.158 21.57 0.00 0.00 4.63
646 2403 1.742768 GGGATGAAGCGATCGAGGT 59.257 57.895 21.57 1.71 0.00 3.85
647 2404 0.105039 GGGATGAAGCGATCGAGGTT 59.895 55.000 21.57 8.47 34.19 3.50
648 2405 1.340248 GGGATGAAGCGATCGAGGTTA 59.660 52.381 21.57 0.00 31.35 2.85
649 2406 2.028930 GGGATGAAGCGATCGAGGTTAT 60.029 50.000 21.57 4.69 31.35 1.89
650 2407 3.555168 GGGATGAAGCGATCGAGGTTATT 60.555 47.826 21.57 2.58 31.35 1.40
651 2408 4.321750 GGGATGAAGCGATCGAGGTTATTA 60.322 45.833 21.57 0.00 31.35 0.98
652 2409 4.859798 GGATGAAGCGATCGAGGTTATTAG 59.140 45.833 21.57 0.00 31.35 1.73
653 2410 3.639538 TGAAGCGATCGAGGTTATTAGC 58.360 45.455 21.57 0.00 31.35 3.09
654 2411 2.333389 AGCGATCGAGGTTATTAGCG 57.667 50.000 21.57 0.00 0.00 4.26
655 2412 0.708918 GCGATCGAGGTTATTAGCGC 59.291 55.000 21.57 0.00 36.35 5.92
656 2413 1.929038 GCGATCGAGGTTATTAGCGCA 60.929 52.381 21.57 0.00 42.41 6.09
657 2414 2.596452 CGATCGAGGTTATTAGCGCAT 58.404 47.619 10.26 0.00 0.00 4.73
658 2415 2.342651 CGATCGAGGTTATTAGCGCATG 59.657 50.000 10.26 0.00 0.00 4.06
659 2416 2.882927 TCGAGGTTATTAGCGCATGT 57.117 45.000 11.47 0.00 0.00 3.21
660 2417 3.994204 TCGAGGTTATTAGCGCATGTA 57.006 42.857 11.47 0.00 0.00 2.29
661 2418 3.635331 TCGAGGTTATTAGCGCATGTAC 58.365 45.455 11.47 0.14 0.00 2.90
662 2419 2.729882 CGAGGTTATTAGCGCATGTACC 59.270 50.000 11.47 10.38 0.00 3.34
663 2420 3.724374 GAGGTTATTAGCGCATGTACCA 58.276 45.455 11.47 0.00 0.00 3.25
664 2421 4.315803 GAGGTTATTAGCGCATGTACCAT 58.684 43.478 11.47 0.78 0.00 3.55
665 2422 5.475719 GAGGTTATTAGCGCATGTACCATA 58.524 41.667 11.47 0.00 0.00 2.74
666 2423 5.479306 AGGTTATTAGCGCATGTACCATAG 58.521 41.667 11.47 0.00 0.00 2.23
667 2424 4.092968 GGTTATTAGCGCATGTACCATAGC 59.907 45.833 11.47 0.00 0.00 2.97
668 2425 2.900716 TTAGCGCATGTACCATAGCA 57.099 45.000 11.47 0.00 0.00 3.49
669 2426 3.401033 TTAGCGCATGTACCATAGCAT 57.599 42.857 11.47 0.00 0.00 3.79
670 2427 2.260844 AGCGCATGTACCATAGCATT 57.739 45.000 11.47 0.00 0.00 3.56
671 2428 2.575532 AGCGCATGTACCATAGCATTT 58.424 42.857 11.47 0.00 0.00 2.32
672 2429 3.738982 AGCGCATGTACCATAGCATTTA 58.261 40.909 11.47 0.00 0.00 1.40
673 2430 3.748048 AGCGCATGTACCATAGCATTTAG 59.252 43.478 11.47 0.00 0.00 1.85
674 2431 3.667960 GCGCATGTACCATAGCATTTAGC 60.668 47.826 0.30 0.00 46.19 3.09
686 2443 2.327568 GCATTTAGCGTTGCAACATGT 58.672 42.857 28.01 14.37 38.72 3.21
687 2444 3.497118 GCATTTAGCGTTGCAACATGTA 58.503 40.909 28.01 13.40 38.72 2.29
688 2445 4.104776 GCATTTAGCGTTGCAACATGTAT 58.895 39.130 28.01 11.89 38.72 2.29
689 2446 5.270083 GCATTTAGCGTTGCAACATGTATA 58.730 37.500 28.01 11.71 38.72 1.47
690 2447 5.741510 GCATTTAGCGTTGCAACATGTATAA 59.258 36.000 28.01 15.21 38.72 0.98
691 2448 6.075415 GCATTTAGCGTTGCAACATGTATAAG 60.075 38.462 28.01 10.97 38.72 1.73
692 2449 6.729391 TTTAGCGTTGCAACATGTATAAGA 57.271 33.333 28.01 3.05 0.00 2.10
693 2450 4.864916 AGCGTTGCAACATGTATAAGAG 57.135 40.909 28.01 9.57 0.00 2.85
694 2451 4.253685 AGCGTTGCAACATGTATAAGAGT 58.746 39.130 28.01 0.00 0.00 3.24
695 2452 4.330074 AGCGTTGCAACATGTATAAGAGTC 59.670 41.667 28.01 5.52 0.00 3.36
696 2453 4.330074 GCGTTGCAACATGTATAAGAGTCT 59.670 41.667 28.01 0.00 0.00 3.24
697 2454 5.163854 GCGTTGCAACATGTATAAGAGTCTT 60.164 40.000 28.01 10.87 0.00 3.01
698 2455 6.243551 CGTTGCAACATGTATAAGAGTCTTG 58.756 40.000 28.01 0.49 0.00 3.02
699 2456 6.546395 GTTGCAACATGTATAAGAGTCTTGG 58.454 40.000 24.52 1.10 0.00 3.61
700 2457 6.048732 TGCAACATGTATAAGAGTCTTGGA 57.951 37.500 15.90 0.00 0.00 3.53
701 2458 6.653020 TGCAACATGTATAAGAGTCTTGGAT 58.347 36.000 15.90 4.58 0.00 3.41
702 2459 6.539826 TGCAACATGTATAAGAGTCTTGGATG 59.460 38.462 15.90 12.86 0.00 3.51
703 2460 6.540189 GCAACATGTATAAGAGTCTTGGATGT 59.460 38.462 15.90 13.41 0.00 3.06
704 2461 7.066284 GCAACATGTATAAGAGTCTTGGATGTT 59.934 37.037 15.90 17.54 33.01 2.71
705 2462 9.599866 CAACATGTATAAGAGTCTTGGATGTTA 57.400 33.333 15.90 0.00 31.91 2.41
707 2464 9.988815 ACATGTATAAGAGTCTTGGATGTTATC 57.011 33.333 15.90 0.00 0.00 1.75
745 2502 4.592485 TTTTTCAATTTCCCTAAGCGCA 57.408 36.364 11.47 0.00 0.00 6.09
746 2503 4.799564 TTTTCAATTTCCCTAAGCGCAT 57.200 36.364 11.47 0.00 0.00 4.73
747 2504 3.781079 TTCAATTTCCCTAAGCGCATG 57.219 42.857 11.47 0.00 0.00 4.06
748 2505 2.722094 TCAATTTCCCTAAGCGCATGT 58.278 42.857 11.47 0.00 0.00 3.21
749 2506 3.879998 TCAATTTCCCTAAGCGCATGTA 58.120 40.909 11.47 0.00 0.00 2.29
750 2507 4.460263 TCAATTTCCCTAAGCGCATGTAT 58.540 39.130 11.47 0.00 0.00 2.29
751 2508 5.616270 TCAATTTCCCTAAGCGCATGTATA 58.384 37.500 11.47 0.00 0.00 1.47
752 2509 6.058833 TCAATTTCCCTAAGCGCATGTATAA 58.941 36.000 11.47 0.00 0.00 0.98
753 2510 6.204688 TCAATTTCCCTAAGCGCATGTATAAG 59.795 38.462 11.47 0.00 0.00 1.73
754 2511 4.948341 TTCCCTAAGCGCATGTATAAGA 57.052 40.909 11.47 0.00 0.00 2.10
755 2512 4.521130 TCCCTAAGCGCATGTATAAGAG 57.479 45.455 11.47 0.00 0.00 2.85
756 2513 3.895656 TCCCTAAGCGCATGTATAAGAGT 59.104 43.478 11.47 0.00 0.00 3.24
757 2514 4.022242 TCCCTAAGCGCATGTATAAGAGTC 60.022 45.833 11.47 0.00 0.00 3.36
758 2515 4.021894 CCCTAAGCGCATGTATAAGAGTCT 60.022 45.833 11.47 0.00 0.00 3.24
759 2516 5.509840 CCCTAAGCGCATGTATAAGAGTCTT 60.510 44.000 11.47 10.87 0.00 3.01
760 2517 5.403766 CCTAAGCGCATGTATAAGAGTCTTG 59.596 44.000 15.90 0.00 0.00 3.02
761 2518 3.126831 AGCGCATGTATAAGAGTCTTGC 58.873 45.455 15.90 8.79 0.00 4.01
762 2519 2.866156 GCGCATGTATAAGAGTCTTGCA 59.134 45.455 15.90 11.50 33.76 4.08
763 2520 3.496130 GCGCATGTATAAGAGTCTTGCAT 59.504 43.478 15.90 13.10 33.76 3.96
764 2521 4.024556 GCGCATGTATAAGAGTCTTGCATT 60.025 41.667 15.90 0.75 33.76 3.56
765 2522 5.438117 CGCATGTATAAGAGTCTTGCATTG 58.562 41.667 15.90 7.74 33.76 2.82
766 2523 5.234972 CGCATGTATAAGAGTCTTGCATTGA 59.765 40.000 15.90 0.00 33.76 2.57
767 2524 6.238184 CGCATGTATAAGAGTCTTGCATTGAA 60.238 38.462 15.90 0.00 33.76 2.69
768 2525 7.130917 GCATGTATAAGAGTCTTGCATTGAAG 58.869 38.462 15.90 6.62 34.13 3.02
769 2526 7.011763 GCATGTATAAGAGTCTTGCATTGAAGA 59.988 37.037 15.90 0.00 34.13 2.87
770 2527 8.886719 CATGTATAAGAGTCTTGCATTGAAGAA 58.113 33.333 15.90 0.00 33.73 2.52
771 2528 8.484641 TGTATAAGAGTCTTGCATTGAAGAAG 57.515 34.615 15.90 0.00 33.73 2.85
772 2529 4.762956 AAGAGTCTTGCATTGAAGAAGC 57.237 40.909 4.10 0.00 33.73 3.86
773 2530 3.080319 AGAGTCTTGCATTGAAGAAGCC 58.920 45.455 0.00 0.00 33.73 4.35
774 2531 2.163211 GAGTCTTGCATTGAAGAAGCCC 59.837 50.000 0.00 0.00 33.73 5.19
781 2538 3.053395 TGCATTGAAGAAGCCCTAATCCT 60.053 43.478 0.00 0.00 0.00 3.24
842 2599 9.528489 AGTAATGTGGTACATTTTCTTTGGTAT 57.472 29.630 11.88 0.00 45.80 2.73
845 2602 9.528489 AATGTGGTACATTTTCTTTGGTATAGT 57.472 29.630 1.55 0.00 45.80 2.12
847 2604 9.661563 TGTGGTACATTTTCTTTGGTATAGTAG 57.338 33.333 0.00 0.00 44.52 2.57
848 2605 9.880157 GTGGTACATTTTCTTTGGTATAGTAGA 57.120 33.333 0.00 0.00 44.52 2.59
880 2642 4.349342 TGGTATTGTTTTCCTTTTGGGCAT 59.651 37.500 0.00 0.00 40.87 4.40
882 2644 2.926778 TGTTTTCCTTTTGGGCATGG 57.073 45.000 0.00 0.00 40.87 3.66
883 2645 2.122768 TGTTTTCCTTTTGGGCATGGT 58.877 42.857 0.00 0.00 40.87 3.55
884 2646 2.158842 TGTTTTCCTTTTGGGCATGGTG 60.159 45.455 0.00 0.00 40.87 4.17
885 2647 1.799933 TTTCCTTTTGGGCATGGTGT 58.200 45.000 0.00 0.00 40.87 4.16
903 2671 3.992427 GGTGTGCTAGTACAGGTACAAAC 59.008 47.826 14.45 0.00 38.48 2.93
907 2675 6.259387 GTGTGCTAGTACAGGTACAAACTTTT 59.741 38.462 14.45 0.00 38.48 2.27
908 2676 6.480981 TGTGCTAGTACAGGTACAAACTTTTC 59.519 38.462 9.84 0.00 38.48 2.29
909 2677 5.693104 TGCTAGTACAGGTACAAACTTTTCG 59.307 40.000 11.78 0.00 38.48 3.46
910 2678 5.922544 GCTAGTACAGGTACAAACTTTTCGA 59.077 40.000 11.78 0.00 38.48 3.71
911 2679 6.589139 GCTAGTACAGGTACAAACTTTTCGAT 59.411 38.462 11.78 0.00 38.48 3.59
912 2680 6.780706 AGTACAGGTACAAACTTTTCGATG 57.219 37.500 11.78 0.00 38.48 3.84
913 2681 6.285990 AGTACAGGTACAAACTTTTCGATGT 58.714 36.000 11.78 0.00 38.48 3.06
1523 3309 1.362406 GCTAGAACTTCGCTGTGGCC 61.362 60.000 0.00 0.00 34.44 5.36
1667 3481 9.762933 CTTTAATTTTGTTGGGAATTCTTGAGA 57.237 29.630 5.23 0.00 0.00 3.27
1769 3583 7.761249 AGCTTGATGCAATTACTTACCATTTTC 59.239 33.333 0.00 0.00 45.94 2.29
1803 3617 0.532573 AGACACGATGCGAATCAGGT 59.467 50.000 3.80 0.00 0.00 4.00
1860 3715 7.884816 TGAGTTGGAAGAACTTTAAGTATCG 57.115 36.000 0.00 0.00 0.00 2.92
1870 3725 7.527457 AGAACTTTAAGTATCGGTGCATTTTC 58.473 34.615 0.00 0.00 0.00 2.29
1889 3744 7.381678 GCATTTTCGTATACTTTCGAGGTATCT 59.618 37.037 13.77 0.00 37.38 1.98
2046 3906 1.288037 GGGGAGGGGTTGCTTAAGAAT 59.712 52.381 6.67 0.00 0.00 2.40
2523 4383 2.225727 GCTTACCAGTTACCAGTGCAAC 59.774 50.000 0.00 0.00 0.00 4.17
2666 4526 2.158957 TCACTGGACAGTTGGACTTGTC 60.159 50.000 1.49 0.00 40.20 3.18
2782 4647 4.653341 TGATTGACCCCATTTGACTTTGTT 59.347 37.500 0.00 0.00 0.00 2.83
2972 4862 3.473625 GTGTAACTACTGTTGGGCAACT 58.526 45.455 0.00 0.00 41.67 3.16
3016 4906 5.971202 GTGACACAACCACACTGATAAAAAG 59.029 40.000 0.00 0.00 34.81 2.27
3127 5104 3.257873 CCCTGCCATGTATGTTTGTTGAA 59.742 43.478 0.00 0.00 0.00 2.69
3288 5277 1.203440 AGCCCTAAGAAGACCCTGGAA 60.203 52.381 0.00 0.00 0.00 3.53
3465 5454 9.750125 GAGTTCTTGAAATTTGGTTACTTGAAT 57.250 29.630 0.00 0.00 0.00 2.57
3480 5469 7.489113 GGTTACTTGAATGCAATAAACCATCAG 59.511 37.037 18.80 0.00 42.48 2.90
3738 5728 2.370445 CCAGGAGTAGGGGCAGTGG 61.370 68.421 0.00 0.00 0.00 4.00
3833 5823 4.086706 ACCGTCCTTCAGAACTCAAATT 57.913 40.909 0.00 0.00 0.00 1.82
3906 5896 4.202357 ACCCGACATACATGTGATAGCATT 60.202 41.667 9.11 0.00 41.95 3.56
3944 5934 7.814587 TGAGTTTACATCCGCATATAGATTCTG 59.185 37.037 0.00 0.00 0.00 3.02
4113 6689 0.326264 ATGCTGGTGTGAAGGACTCC 59.674 55.000 0.00 0.00 38.52 3.85
4165 6741 9.502091 AACATTGTTAGCTCTGTTCTTGTTATA 57.498 29.630 0.00 0.00 0.00 0.98
4166 6742 9.672673 ACATTGTTAGCTCTGTTCTTGTTATAT 57.327 29.630 0.00 0.00 0.00 0.86
4183 6759 9.295214 CTTGTTATATATTCATCTACTGCTCGG 57.705 37.037 0.00 0.00 0.00 4.63
4184 6760 8.575649 TGTTATATATTCATCTACTGCTCGGA 57.424 34.615 0.00 0.00 0.00 4.55
4185 6761 9.190317 TGTTATATATTCATCTACTGCTCGGAT 57.810 33.333 0.00 0.00 0.00 4.18
4188 6764 4.944619 ATTCATCTACTGCTCGGATTCA 57.055 40.909 0.00 0.00 0.00 2.57
4189 6765 4.944619 TTCATCTACTGCTCGGATTCAT 57.055 40.909 0.00 0.00 0.00 2.57
4190 6766 4.248691 TCATCTACTGCTCGGATTCATG 57.751 45.455 0.00 0.00 0.00 3.07
4191 6767 3.638627 TCATCTACTGCTCGGATTCATGT 59.361 43.478 0.00 0.00 0.00 3.21
4192 6768 3.443099 TCTACTGCTCGGATTCATGTG 57.557 47.619 0.00 0.00 0.00 3.21
4193 6769 2.760650 TCTACTGCTCGGATTCATGTGT 59.239 45.455 0.00 0.00 0.00 3.72
4194 6770 2.015736 ACTGCTCGGATTCATGTGTC 57.984 50.000 0.00 0.00 0.00 3.67
4195 6771 0.926155 CTGCTCGGATTCATGTGTCG 59.074 55.000 0.00 0.00 0.00 4.35
4196 6772 0.530288 TGCTCGGATTCATGTGTCGA 59.470 50.000 0.00 0.00 0.00 4.20
4197 6773 1.203928 GCTCGGATTCATGTGTCGAG 58.796 55.000 18.45 18.45 46.72 4.04
4198 6774 1.202302 GCTCGGATTCATGTGTCGAGA 60.202 52.381 23.29 12.19 46.89 4.04
4199 6775 2.455032 CTCGGATTCATGTGTCGAGAC 58.545 52.381 18.15 5.61 46.89 3.36
4200 6776 1.191944 CGGATTCATGTGTCGAGACG 58.808 55.000 8.31 0.00 0.00 4.18
4201 6777 1.467543 CGGATTCATGTGTCGAGACGT 60.468 52.381 8.31 4.72 0.00 4.34
4202 6778 1.920574 GGATTCATGTGTCGAGACGTG 59.079 52.381 24.83 24.83 34.64 4.49
4203 6779 2.415491 GGATTCATGTGTCGAGACGTGA 60.415 50.000 28.16 28.16 39.58 4.35
4204 6780 2.331809 TTCATGTGTCGAGACGTGAG 57.668 50.000 29.41 10.95 41.70 3.51
4205 6781 1.519408 TCATGTGTCGAGACGTGAGA 58.481 50.000 28.16 11.98 37.03 3.27
4206 6782 1.197036 TCATGTGTCGAGACGTGAGAC 59.803 52.381 28.16 0.00 37.03 3.36
4207 6783 0.522180 ATGTGTCGAGACGTGAGACC 59.478 55.000 6.63 0.00 34.24 3.85
4208 6784 0.816421 TGTGTCGAGACGTGAGACCA 60.816 55.000 8.31 0.00 34.24 4.02
4209 6785 0.522180 GTGTCGAGACGTGAGACCAT 59.478 55.000 0.00 0.00 34.24 3.55
4210 6786 0.803117 TGTCGAGACGTGAGACCATC 59.197 55.000 0.00 0.00 34.24 3.51
4211 6787 1.088306 GTCGAGACGTGAGACCATCT 58.912 55.000 0.00 0.00 0.00 2.90
4212 6788 1.469308 GTCGAGACGTGAGACCATCTT 59.531 52.381 0.00 0.00 0.00 2.40
4213 6789 2.676839 GTCGAGACGTGAGACCATCTTA 59.323 50.000 0.00 0.00 0.00 2.10
4214 6790 2.937149 TCGAGACGTGAGACCATCTTAG 59.063 50.000 0.00 0.00 0.00 2.18
4215 6791 2.937149 CGAGACGTGAGACCATCTTAGA 59.063 50.000 0.00 0.00 0.00 2.10
4216 6792 3.001838 CGAGACGTGAGACCATCTTAGAG 59.998 52.174 0.00 0.00 0.00 2.43
4217 6793 3.942748 GAGACGTGAGACCATCTTAGAGT 59.057 47.826 0.00 0.00 0.00 3.24
4218 6794 4.337145 AGACGTGAGACCATCTTAGAGTT 58.663 43.478 0.00 0.00 0.00 3.01
4219 6795 4.156922 AGACGTGAGACCATCTTAGAGTTG 59.843 45.833 0.00 0.00 0.00 3.16
4220 6796 3.193691 ACGTGAGACCATCTTAGAGTTGG 59.806 47.826 0.65 0.65 40.18 3.77
4221 6797 3.429547 CGTGAGACCATCTTAGAGTTGGG 60.430 52.174 6.79 0.00 38.97 4.12
4222 6798 2.501723 TGAGACCATCTTAGAGTTGGGC 59.498 50.000 6.79 3.42 42.29 5.36
4223 6799 2.839228 AGACCATCTTAGAGTTGGGCT 58.161 47.619 4.46 4.46 46.16 5.19
4224 6800 3.186702 GACCATCTTAGAGTTGGGCTC 57.813 52.381 6.79 0.00 39.51 4.70
4225 6801 2.501723 GACCATCTTAGAGTTGGGCTCA 59.498 50.000 6.79 0.00 46.47 4.26
4226 6802 3.118531 ACCATCTTAGAGTTGGGCTCAT 58.881 45.455 6.79 0.00 46.47 2.90
4227 6803 4.298626 ACCATCTTAGAGTTGGGCTCATA 58.701 43.478 6.79 0.00 46.47 2.15
4306 7050 9.661563 AGTTATTTCATTCGTACTTTGGTATCA 57.338 29.630 0.00 0.00 0.00 2.15
4367 7111 5.794894 AGTTAGACATCTTGTTTCCATCGT 58.205 37.500 0.00 0.00 0.00 3.73
4382 7126 3.495377 TCCATCGTTTTTGTCCTTGTACG 59.505 43.478 0.00 0.00 0.00 3.67
4391 7135 0.036671 GTCCTTGTACGTGAAGGGGG 60.037 60.000 21.68 7.72 40.52 5.40
4437 7181 6.039829 AGTCTCACATCTTATACTTCATCGCA 59.960 38.462 0.00 0.00 0.00 5.10
4585 7329 0.815095 TCTGATTTACCGCAGCGAGA 59.185 50.000 18.75 6.16 32.27 4.04
4627 7371 0.511221 CGACGACATTGTCACCCAAC 59.489 55.000 16.61 1.02 38.84 3.77
4634 7378 1.195900 CATTGTCACCCAACGTAACGG 59.804 52.381 0.00 0.00 35.44 4.44
4724 7468 4.192317 CTGGCTGTAAAGTGGGATAAGAC 58.808 47.826 0.00 0.00 0.00 3.01
4773 7517 4.941873 GGTGTTTCTTCTTCATACGGGATT 59.058 41.667 0.00 0.00 0.00 3.01
4790 7534 4.074970 GGGATTGAGCTGTTTCTTCTTCA 58.925 43.478 0.00 0.00 0.00 3.02
4879 7624 2.396157 GGAACGCGGGTGATTGACC 61.396 63.158 12.47 0.00 45.28 4.02
4988 7733 1.691196 CACAGGGTCTCTTTGGCAAA 58.309 50.000 12.79 12.79 0.00 3.68
5045 8023 9.466497 TGAGATTGACATTTTAATCTTTAGCCT 57.534 29.630 0.92 0.00 42.13 4.58
5096 8074 1.325355 AGTGCAAGCAACAGCTCAAT 58.675 45.000 0.00 0.00 37.72 2.57
5097 8075 1.000607 AGTGCAAGCAACAGCTCAATG 60.001 47.619 0.00 0.00 37.72 2.82
5098 8076 1.001048 GTGCAAGCAACAGCTCAATGA 60.001 47.619 0.00 0.00 37.72 2.57
5100 8078 1.959747 CAAGCAACAGCTCAATGACG 58.040 50.000 0.00 0.00 37.72 4.35
5101 8079 0.877071 AAGCAACAGCTCAATGACGG 59.123 50.000 0.00 0.00 37.72 4.79
5102 8080 0.957395 AGCAACAGCTCAATGACGGG 60.957 55.000 0.00 0.00 31.68 5.28
5103 8081 1.926511 GCAACAGCTCAATGACGGGG 61.927 60.000 0.00 0.00 0.00 5.73
5104 8082 1.675641 AACAGCTCAATGACGGGGC 60.676 57.895 0.00 0.00 0.00 5.80
5105 8083 2.825836 CAGCTCAATGACGGGGCC 60.826 66.667 0.00 0.00 0.00 5.80
5106 8084 3.011517 AGCTCAATGACGGGGCCT 61.012 61.111 0.84 0.00 0.00 5.19
5107 8085 2.044946 GCTCAATGACGGGGCCTT 60.045 61.111 0.84 0.00 0.00 4.35
5112 8090 0.394216 CAATGACGGGGCCTTGATGA 60.394 55.000 0.84 0.00 0.00 2.92
5113 8091 0.107017 AATGACGGGGCCTTGATGAG 60.107 55.000 0.84 0.00 0.00 2.90
5199 8205 6.384224 AGTGTGTCATCGTATTTACTCGAAA 58.616 36.000 0.00 0.00 39.45 3.46
5203 8209 7.169476 TGTGTCATCGTATTTACTCGAAACAAA 59.831 33.333 0.00 0.00 39.45 2.83
5380 8392 3.935203 CAGTCTTTTATCGTGCCATCTGT 59.065 43.478 0.00 0.00 0.00 3.41
5382 8394 4.393062 AGTCTTTTATCGTGCCATCTGTTG 59.607 41.667 0.00 0.00 0.00 3.33
5511 8523 0.652592 CCGCGATTACTGCTGAAAGG 59.347 55.000 8.23 0.00 0.00 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.886132 TTGAAAGAGGAGTACATTATTAAGGAC 57.114 33.333 0.00 0.00 0.00 3.85
5 6 9.905713 ATGCTTTGAAAGAGGAGTACATTATTA 57.094 29.630 9.48 0.00 0.00 0.98
6 7 8.814038 ATGCTTTGAAAGAGGAGTACATTATT 57.186 30.769 9.48 0.00 0.00 1.40
7 8 8.049117 TGATGCTTTGAAAGAGGAGTACATTAT 58.951 33.333 9.48 0.00 0.00 1.28
8 9 7.334421 GTGATGCTTTGAAAGAGGAGTACATTA 59.666 37.037 9.48 0.00 0.00 1.90
9 10 6.150140 GTGATGCTTTGAAAGAGGAGTACATT 59.850 38.462 9.48 0.00 0.00 2.71
19 20 4.859304 ATTGCAGTGATGCTTTGAAAGA 57.141 36.364 9.48 0.00 35.49 2.52
48 49 6.000219 AGAATGATTTGCGGCTTATCAGTAT 59.000 36.000 17.79 12.43 32.32 2.12
49 50 5.237127 CAGAATGATTTGCGGCTTATCAGTA 59.763 40.000 17.79 1.73 39.69 2.74
50 51 4.036027 CAGAATGATTTGCGGCTTATCAGT 59.964 41.667 17.79 16.14 39.69 3.41
52 53 3.947196 ACAGAATGATTTGCGGCTTATCA 59.053 39.130 16.07 16.07 39.69 2.15
58 59 1.267732 CGAGACAGAATGATTTGCGGC 60.268 52.381 0.00 0.00 39.69 6.53
66 67 0.462581 GGCATGCCGAGACAGAATGA 60.463 55.000 23.48 0.00 39.69 2.57
68 69 0.254178 AAGGCATGCCGAGACAGAAT 59.746 50.000 30.50 7.34 41.95 2.40
70 71 1.219124 GAAGGCATGCCGAGACAGA 59.781 57.895 30.50 0.00 41.95 3.41
71 72 0.809241 GAGAAGGCATGCCGAGACAG 60.809 60.000 30.50 0.00 41.95 3.51
72 73 1.219124 GAGAAGGCATGCCGAGACA 59.781 57.895 30.50 0.00 41.95 3.41
75 76 0.107993 TCTTGAGAAGGCATGCCGAG 60.108 55.000 30.50 20.32 41.95 4.63
76 77 0.543277 ATCTTGAGAAGGCATGCCGA 59.457 50.000 30.50 19.70 41.95 5.54
78 79 2.048444 TGATCTTGAGAAGGCATGCC 57.952 50.000 30.12 30.12 0.00 4.40
100 147 3.376234 TCGGATAACTCAAGTACGACAGG 59.624 47.826 0.00 0.00 0.00 4.00
103 150 4.495514 GGAGTCGGATAACTCAAGTACGAC 60.496 50.000 15.54 15.54 46.15 4.34
104 151 3.624861 GGAGTCGGATAACTCAAGTACGA 59.375 47.826 6.40 0.00 46.15 3.43
107 154 5.988310 TTTGGAGTCGGATAACTCAAGTA 57.012 39.130 6.40 0.00 46.15 2.24
109 156 5.122396 CCTTTTTGGAGTCGGATAACTCAAG 59.878 44.000 6.40 1.85 46.15 3.02
126 173 4.811555 TCGTGTTGATGACTCCTTTTTG 57.188 40.909 0.00 0.00 0.00 2.44
131 178 4.021104 TCTCAAATCGTGTTGATGACTCCT 60.021 41.667 4.42 0.00 36.92 3.69
132 179 4.092091 GTCTCAAATCGTGTTGATGACTCC 59.908 45.833 16.34 0.00 36.92 3.85
133 180 4.686091 TGTCTCAAATCGTGTTGATGACTC 59.314 41.667 19.94 8.09 36.92 3.36
135 182 4.990543 TGTCTCAAATCGTGTTGATGAC 57.009 40.909 16.54 16.54 36.92 3.06
136 183 4.327087 CGATGTCTCAAATCGTGTTGATGA 59.673 41.667 4.42 2.95 41.52 2.92
145 192 3.181530 GGTTGTGTCGATGTCTCAAATCG 60.182 47.826 0.00 0.00 46.47 3.34
147 194 2.736721 CGGTTGTGTCGATGTCTCAAAT 59.263 45.455 0.00 0.00 0.00 2.32
149 196 1.604438 CCGGTTGTGTCGATGTCTCAA 60.604 52.381 0.00 0.00 0.00 3.02
151 198 0.736325 CCCGGTTGTGTCGATGTCTC 60.736 60.000 0.00 0.00 0.00 3.36
152 199 1.292223 CCCGGTTGTGTCGATGTCT 59.708 57.895 0.00 0.00 0.00 3.41
153 200 0.244450 TACCCGGTTGTGTCGATGTC 59.756 55.000 0.00 0.00 0.00 3.06
190 238 8.895141 TGCTACATACTACATAGAATACCCAT 57.105 34.615 0.00 0.00 0.00 4.00
191 239 8.749354 CATGCTACATACTACATAGAATACCCA 58.251 37.037 0.00 0.00 0.00 4.51
192 240 8.967918 TCATGCTACATACTACATAGAATACCC 58.032 37.037 0.00 0.00 0.00 3.69
193 241 9.790389 GTCATGCTACATACTACATAGAATACC 57.210 37.037 0.00 0.00 0.00 2.73
194 242 9.491934 CGTCATGCTACATACTACATAGAATAC 57.508 37.037 0.00 0.00 0.00 1.89
195 243 9.444600 TCGTCATGCTACATACTACATAGAATA 57.555 33.333 0.00 0.00 0.00 1.75
196 244 8.336801 TCGTCATGCTACATACTACATAGAAT 57.663 34.615 0.00 0.00 0.00 2.40
198 246 7.923414 ATCGTCATGCTACATACTACATAGA 57.077 36.000 0.00 0.00 0.00 1.98
232 938 9.881649 AAGCTCATGAATCATCGTATAATACAT 57.118 29.630 0.00 0.00 0.00 2.29
242 949 4.742167 ACGAGTTAAGCTCATGAATCATCG 59.258 41.667 0.00 3.61 44.33 3.84
264 971 6.919721 TCTTTCAAACATTTAGGGCATGTAC 58.080 36.000 0.00 0.00 33.54 2.90
265 972 7.716799 ATCTTTCAAACATTTAGGGCATGTA 57.283 32.000 0.00 0.00 33.54 2.29
281 1622 7.656137 ACTAGCGAGTAGTTTGAAATCTTTCAA 59.344 33.333 12.78 12.78 43.30 2.69
300 1641 0.952010 GCGGGGAAAAACACTAGCGA 60.952 55.000 0.00 0.00 0.00 4.93
309 1650 1.878948 CGTCAACCTAGCGGGGAAAAA 60.879 52.381 5.05 0.00 40.03 1.94
314 1655 1.447314 GAACGTCAACCTAGCGGGG 60.447 63.158 0.00 0.35 40.03 5.73
315 1656 0.736325 CTGAACGTCAACCTAGCGGG 60.736 60.000 0.00 0.00 41.89 6.13
316 1657 0.038526 ACTGAACGTCAACCTAGCGG 60.039 55.000 0.00 0.00 0.00 5.52
317 1658 1.060713 CACTGAACGTCAACCTAGCG 58.939 55.000 0.00 0.00 0.00 4.26
318 1659 1.270147 ACCACTGAACGTCAACCTAGC 60.270 52.381 0.00 0.00 0.00 3.42
319 1660 2.609737 GGACCACTGAACGTCAACCTAG 60.610 54.545 0.00 0.00 0.00 3.02
320 1661 1.342174 GGACCACTGAACGTCAACCTA 59.658 52.381 0.00 0.00 0.00 3.08
322 1663 0.106149 AGGACCACTGAACGTCAACC 59.894 55.000 0.00 0.00 0.00 3.77
325 2080 0.391597 GGAAGGACCACTGAACGTCA 59.608 55.000 0.00 0.00 38.79 4.35
337 2092 4.730966 AGAAAGAAAAAGGAGGGAAGGAC 58.269 43.478 0.00 0.00 0.00 3.85
338 2093 5.403558 AAGAAAGAAAAAGGAGGGAAGGA 57.596 39.130 0.00 0.00 0.00 3.36
340 2095 6.322456 ACAGAAAGAAAGAAAAAGGAGGGAAG 59.678 38.462 0.00 0.00 0.00 3.46
341 2096 6.194967 ACAGAAAGAAAGAAAAAGGAGGGAA 58.805 36.000 0.00 0.00 0.00 3.97
363 2118 1.544691 GTGCGAGAAGGTAGAAGGACA 59.455 52.381 0.00 0.00 0.00 4.02
364 2119 1.819903 AGTGCGAGAAGGTAGAAGGAC 59.180 52.381 0.00 0.00 0.00 3.85
368 2123 3.056749 GGAAGAAGTGCGAGAAGGTAGAA 60.057 47.826 0.00 0.00 0.00 2.10
379 2134 1.129998 CATGCTTGAGGAAGAAGTGCG 59.870 52.381 0.00 0.00 0.00 5.34
406 2161 1.598130 GTTCACCTCACGCCAGCTT 60.598 57.895 0.00 0.00 0.00 3.74
409 2164 2.022129 GACGTTCACCTCACGCCAG 61.022 63.158 0.00 0.00 41.53 4.85
410 2165 2.028484 GACGTTCACCTCACGCCA 59.972 61.111 0.00 0.00 41.53 5.69
411 2166 0.108992 TATGACGTTCACCTCACGCC 60.109 55.000 0.00 0.00 41.53 5.68
413 2168 3.547868 CAGATTATGACGTTCACCTCACG 59.452 47.826 0.00 0.00 43.52 4.35
414 2169 4.495422 ACAGATTATGACGTTCACCTCAC 58.505 43.478 0.00 0.00 0.00 3.51
447 2204 9.974980 ACGACCTATGAAAACAAAATTATTGTT 57.025 25.926 10.86 10.86 43.72 2.83
453 2210 8.021396 GCTCTTACGACCTATGAAAACAAAATT 58.979 33.333 0.00 0.00 0.00 1.82
459 2216 5.581085 ACATGCTCTTACGACCTATGAAAAC 59.419 40.000 0.00 0.00 0.00 2.43
460 2217 5.730550 ACATGCTCTTACGACCTATGAAAA 58.269 37.500 0.00 0.00 0.00 2.29
465 2222 3.296854 TGGACATGCTCTTACGACCTAT 58.703 45.455 0.00 0.00 0.00 2.57
467 2224 1.557099 TGGACATGCTCTTACGACCT 58.443 50.000 0.00 0.00 0.00 3.85
468 2225 2.380084 TTGGACATGCTCTTACGACC 57.620 50.000 0.00 0.00 0.00 4.79
469 2226 2.030946 GCATTGGACATGCTCTTACGAC 59.969 50.000 0.00 0.00 41.52 4.34
470 2227 2.279741 GCATTGGACATGCTCTTACGA 58.720 47.619 0.00 0.00 41.52 3.43
471 2228 2.009051 TGCATTGGACATGCTCTTACG 58.991 47.619 8.22 0.00 44.79 3.18
472 2229 2.223112 CGTGCATTGGACATGCTCTTAC 60.223 50.000 9.08 0.00 44.79 2.34
473 2230 2.009051 CGTGCATTGGACATGCTCTTA 58.991 47.619 9.08 0.00 44.79 2.10
474 2231 0.806868 CGTGCATTGGACATGCTCTT 59.193 50.000 9.08 0.00 44.79 2.85
475 2232 1.651240 GCGTGCATTGGACATGCTCT 61.651 55.000 9.08 0.00 44.79 4.09
476 2233 1.226491 GCGTGCATTGGACATGCTC 60.226 57.895 9.08 3.92 44.79 4.26
477 2234 2.879907 GCGTGCATTGGACATGCT 59.120 55.556 9.08 0.00 44.79 3.79
479 2236 1.596260 CTAGAGCGTGCATTGGACATG 59.404 52.381 9.08 0.00 0.00 3.21
480 2237 1.208052 ACTAGAGCGTGCATTGGACAT 59.792 47.619 9.08 0.00 0.00 3.06
481 2238 0.608130 ACTAGAGCGTGCATTGGACA 59.392 50.000 9.08 0.00 0.00 4.02
482 2239 1.002366 CACTAGAGCGTGCATTGGAC 58.998 55.000 0.00 0.00 0.00 4.02
483 2240 0.894835 TCACTAGAGCGTGCATTGGA 59.105 50.000 0.00 0.00 34.92 3.53
484 2241 1.662629 CTTCACTAGAGCGTGCATTGG 59.337 52.381 0.00 0.00 34.92 3.16
485 2242 2.602211 CTCTTCACTAGAGCGTGCATTG 59.398 50.000 0.00 0.00 43.73 2.82
486 2243 2.886081 CTCTTCACTAGAGCGTGCATT 58.114 47.619 0.00 0.00 43.73 3.56
487 2244 2.575694 CTCTTCACTAGAGCGTGCAT 57.424 50.000 0.00 0.00 43.73 3.96
495 2252 1.004394 TCCTGACGCCTCTTCACTAGA 59.996 52.381 0.00 0.00 0.00 2.43
496 2253 1.464734 TCCTGACGCCTCTTCACTAG 58.535 55.000 0.00 0.00 0.00 2.57
497 2254 1.751351 CATCCTGACGCCTCTTCACTA 59.249 52.381 0.00 0.00 0.00 2.74
498 2255 0.534412 CATCCTGACGCCTCTTCACT 59.466 55.000 0.00 0.00 0.00 3.41
499 2256 0.460987 CCATCCTGACGCCTCTTCAC 60.461 60.000 0.00 0.00 0.00 3.18
500 2257 0.614697 TCCATCCTGACGCCTCTTCA 60.615 55.000 0.00 0.00 0.00 3.02
501 2258 0.179097 GTCCATCCTGACGCCTCTTC 60.179 60.000 0.00 0.00 0.00 2.87
502 2259 0.904865 TGTCCATCCTGACGCCTCTT 60.905 55.000 0.00 0.00 38.11 2.85
503 2260 0.689080 ATGTCCATCCTGACGCCTCT 60.689 55.000 0.00 0.00 38.11 3.69
504 2261 0.249657 GATGTCCATCCTGACGCCTC 60.250 60.000 0.00 0.00 38.11 4.70
505 2262 1.826024 GATGTCCATCCTGACGCCT 59.174 57.895 0.00 0.00 38.11 5.52
506 2263 4.445699 GATGTCCATCCTGACGCC 57.554 61.111 0.00 0.00 38.11 5.68
520 2277 3.581755 CAACTGCCAATCAAACAGGATG 58.418 45.455 0.00 0.00 46.00 3.51
521 2278 2.564062 CCAACTGCCAATCAAACAGGAT 59.436 45.455 0.00 0.00 35.70 3.24
522 2279 1.962807 CCAACTGCCAATCAAACAGGA 59.037 47.619 0.00 0.00 35.70 3.86
523 2280 1.001181 CCCAACTGCCAATCAAACAGG 59.999 52.381 0.00 0.00 35.70 4.00
524 2281 1.962807 TCCCAACTGCCAATCAAACAG 59.037 47.619 0.00 0.00 37.45 3.16
525 2282 1.686052 GTCCCAACTGCCAATCAAACA 59.314 47.619 0.00 0.00 0.00 2.83
526 2283 1.686052 TGTCCCAACTGCCAATCAAAC 59.314 47.619 0.00 0.00 0.00 2.93
527 2284 2.079170 TGTCCCAACTGCCAATCAAA 57.921 45.000 0.00 0.00 0.00 2.69
528 2285 2.299582 CAATGTCCCAACTGCCAATCAA 59.700 45.455 0.00 0.00 0.00 2.57
529 2286 1.894466 CAATGTCCCAACTGCCAATCA 59.106 47.619 0.00 0.00 0.00 2.57
530 2287 2.170166 TCAATGTCCCAACTGCCAATC 58.830 47.619 0.00 0.00 0.00 2.67
531 2288 2.307496 TCAATGTCCCAACTGCCAAT 57.693 45.000 0.00 0.00 0.00 3.16
532 2289 2.307496 ATCAATGTCCCAACTGCCAA 57.693 45.000 0.00 0.00 0.00 4.52
533 2290 2.170166 GAATCAATGTCCCAACTGCCA 58.830 47.619 0.00 0.00 0.00 4.92
534 2291 1.478105 GGAATCAATGTCCCAACTGCC 59.522 52.381 0.00 0.00 0.00 4.85
535 2292 2.165030 CAGGAATCAATGTCCCAACTGC 59.835 50.000 0.00 0.00 35.59 4.40
536 2293 2.165030 GCAGGAATCAATGTCCCAACTG 59.835 50.000 0.00 0.00 35.59 3.16
537 2294 2.450476 GCAGGAATCAATGTCCCAACT 58.550 47.619 0.00 0.00 35.59 3.16
538 2295 1.478105 GGCAGGAATCAATGTCCCAAC 59.522 52.381 0.00 0.00 35.59 3.77
539 2296 1.619432 GGGCAGGAATCAATGTCCCAA 60.619 52.381 10.18 0.00 35.04 4.12
540 2297 0.033208 GGGCAGGAATCAATGTCCCA 60.033 55.000 10.18 0.00 35.04 4.37
541 2298 1.103398 CGGGCAGGAATCAATGTCCC 61.103 60.000 3.26 5.38 37.96 4.46
542 2299 0.107214 TCGGGCAGGAATCAATGTCC 60.107 55.000 0.00 0.00 37.85 4.02
543 2300 1.972872 ATCGGGCAGGAATCAATGTC 58.027 50.000 0.00 0.00 0.00 3.06
544 2301 2.301346 GAATCGGGCAGGAATCAATGT 58.699 47.619 0.00 0.00 0.00 2.71
545 2302 1.610522 GGAATCGGGCAGGAATCAATG 59.389 52.381 0.00 0.00 0.00 2.82
546 2303 1.496429 AGGAATCGGGCAGGAATCAAT 59.504 47.619 0.00 0.00 0.00 2.57
547 2304 0.918983 AGGAATCGGGCAGGAATCAA 59.081 50.000 0.00 0.00 0.00 2.57
548 2305 0.181114 CAGGAATCGGGCAGGAATCA 59.819 55.000 0.00 0.00 0.00 2.57
549 2306 0.536006 CCAGGAATCGGGCAGGAATC 60.536 60.000 0.00 0.00 0.00 2.52
550 2307 1.533711 CCAGGAATCGGGCAGGAAT 59.466 57.895 0.00 0.00 0.00 3.01
551 2308 2.998097 CCAGGAATCGGGCAGGAA 59.002 61.111 0.00 0.00 0.00 3.36
584 2341 2.778386 GCTCGATGCTTTTTATTGCGTC 59.222 45.455 0.00 0.00 40.62 5.19
585 2342 2.785679 GCTCGATGCTTTTTATTGCGT 58.214 42.857 0.00 0.00 38.95 5.24
586 2343 1.769622 CGCTCGATGCTTTTTATTGCG 59.230 47.619 0.00 0.00 40.11 4.85
587 2344 1.514402 GCGCTCGATGCTTTTTATTGC 59.486 47.619 0.00 0.00 40.11 3.56
588 2345 2.111756 GGCGCTCGATGCTTTTTATTG 58.888 47.619 7.64 0.00 40.11 1.90
589 2346 2.017049 AGGCGCTCGATGCTTTTTATT 58.983 42.857 7.64 0.00 40.11 1.40
590 2347 1.331756 CAGGCGCTCGATGCTTTTTAT 59.668 47.619 7.64 0.00 40.11 1.40
591 2348 0.726827 CAGGCGCTCGATGCTTTTTA 59.273 50.000 7.64 0.00 40.11 1.52
592 2349 1.503542 CAGGCGCTCGATGCTTTTT 59.496 52.632 7.64 0.00 40.11 1.94
593 2350 2.401766 CCAGGCGCTCGATGCTTTT 61.402 57.895 7.64 0.00 40.11 2.27
594 2351 2.821366 CCAGGCGCTCGATGCTTT 60.821 61.111 7.64 0.00 40.11 3.51
595 2352 4.845580 CCCAGGCGCTCGATGCTT 62.846 66.667 7.64 0.00 40.11 3.91
602 2359 3.927481 AAGAAAGGCCCAGGCGCTC 62.927 63.158 7.64 0.00 43.06 5.03
603 2360 3.971702 AAGAAAGGCCCAGGCGCT 61.972 61.111 7.64 0.00 43.06 5.92
604 2361 3.752339 CAAGAAAGGCCCAGGCGC 61.752 66.667 0.00 0.00 43.06 6.53
605 2362 3.752339 GCAAGAAAGGCCCAGGCG 61.752 66.667 0.00 0.00 43.06 5.52
606 2363 3.385384 GGCAAGAAAGGCCCAGGC 61.385 66.667 0.00 0.00 45.87 4.85
612 2369 2.182537 CCGCATGGCAAGAAAGGC 59.817 61.111 0.00 0.00 0.00 4.35
613 2370 1.039233 ATCCCGCATGGCAAGAAAGG 61.039 55.000 0.00 0.00 0.00 3.11
614 2371 0.101759 CATCCCGCATGGCAAGAAAG 59.898 55.000 0.00 0.00 0.00 2.62
615 2372 0.323269 TCATCCCGCATGGCAAGAAA 60.323 50.000 0.00 0.00 32.64 2.52
616 2373 0.323269 TTCATCCCGCATGGCAAGAA 60.323 50.000 0.00 0.00 32.64 2.52
617 2374 0.749091 CTTCATCCCGCATGGCAAGA 60.749 55.000 0.00 0.00 32.64 3.02
618 2375 1.731700 CTTCATCCCGCATGGCAAG 59.268 57.895 0.00 0.00 32.64 4.01
619 2376 2.417257 GCTTCATCCCGCATGGCAA 61.417 57.895 0.00 0.00 32.64 4.52
620 2377 2.829914 GCTTCATCCCGCATGGCA 60.830 61.111 0.00 0.00 32.64 4.92
621 2378 3.957535 CGCTTCATCCCGCATGGC 61.958 66.667 0.00 0.00 32.64 4.40
622 2379 1.572085 GATCGCTTCATCCCGCATGG 61.572 60.000 0.00 0.00 32.64 3.66
623 2380 1.864862 GATCGCTTCATCCCGCATG 59.135 57.895 0.00 0.00 0.00 4.06
624 2381 1.665916 CGATCGCTTCATCCCGCAT 60.666 57.895 0.26 0.00 0.00 4.73
625 2382 2.279451 CGATCGCTTCATCCCGCA 60.279 61.111 0.26 0.00 0.00 5.69
626 2383 2.018866 CTCGATCGCTTCATCCCGC 61.019 63.158 11.09 0.00 0.00 6.13
627 2384 1.372251 CCTCGATCGCTTCATCCCG 60.372 63.158 11.09 0.00 0.00 5.14
628 2385 0.105039 AACCTCGATCGCTTCATCCC 59.895 55.000 11.09 0.00 0.00 3.85
629 2386 2.795175 TAACCTCGATCGCTTCATCC 57.205 50.000 11.09 0.00 0.00 3.51
630 2387 4.324936 GCTAATAACCTCGATCGCTTCATC 59.675 45.833 11.09 0.00 0.00 2.92
631 2388 4.238514 GCTAATAACCTCGATCGCTTCAT 58.761 43.478 11.09 0.00 0.00 2.57
632 2389 3.639538 GCTAATAACCTCGATCGCTTCA 58.360 45.455 11.09 0.00 0.00 3.02
633 2390 2.657372 CGCTAATAACCTCGATCGCTTC 59.343 50.000 11.09 0.00 0.00 3.86
634 2391 2.662700 CGCTAATAACCTCGATCGCTT 58.337 47.619 11.09 4.06 0.00 4.68
635 2392 1.666311 GCGCTAATAACCTCGATCGCT 60.666 52.381 11.09 0.00 38.48 4.93
636 2393 0.708918 GCGCTAATAACCTCGATCGC 59.291 55.000 11.09 0.00 34.61 4.58
637 2394 2.046283 TGCGCTAATAACCTCGATCG 57.954 50.000 9.36 9.36 0.00 3.69
638 2395 3.318017 ACATGCGCTAATAACCTCGATC 58.682 45.455 9.73 0.00 0.00 3.69
639 2396 3.386768 ACATGCGCTAATAACCTCGAT 57.613 42.857 9.73 0.00 0.00 3.59
640 2397 2.882927 ACATGCGCTAATAACCTCGA 57.117 45.000 9.73 0.00 0.00 4.04
641 2398 2.729882 GGTACATGCGCTAATAACCTCG 59.270 50.000 9.73 0.00 0.00 4.63
642 2399 3.724374 TGGTACATGCGCTAATAACCTC 58.276 45.455 9.73 0.00 0.00 3.85
643 2400 3.830744 TGGTACATGCGCTAATAACCT 57.169 42.857 9.73 0.00 0.00 3.50
648 2405 9.215771 GCTAAATGCTATGGTACATGCGCTAAT 62.216 40.741 9.73 0.00 40.67 1.73
649 2406 7.993166 GCTAAATGCTATGGTACATGCGCTAA 61.993 42.308 9.73 0.00 40.67 3.09
650 2407 6.588452 GCTAAATGCTATGGTACATGCGCTA 61.588 44.000 9.73 0.00 40.67 4.26
651 2408 5.859782 GCTAAATGCTATGGTACATGCGCT 61.860 45.833 9.73 0.00 40.67 5.92
652 2409 3.667960 GCTAAATGCTATGGTACATGCGC 60.668 47.826 0.00 0.00 40.67 6.09
653 2410 3.423515 CGCTAAATGCTATGGTACATGCG 60.424 47.826 0.00 0.00 41.44 4.73
654 2411 3.498397 ACGCTAAATGCTATGGTACATGC 59.502 43.478 0.00 0.00 41.44 4.06
655 2412 5.443261 CAACGCTAAATGCTATGGTACATG 58.557 41.667 0.00 0.00 41.44 3.21
656 2413 4.024048 GCAACGCTAAATGCTATGGTACAT 60.024 41.667 0.00 0.00 40.77 2.29
657 2414 3.311322 GCAACGCTAAATGCTATGGTACA 59.689 43.478 0.00 0.00 40.71 2.90
658 2415 3.311322 TGCAACGCTAAATGCTATGGTAC 59.689 43.478 0.00 0.00 42.97 3.34
659 2416 3.536570 TGCAACGCTAAATGCTATGGTA 58.463 40.909 0.00 0.00 42.97 3.25
660 2417 2.364632 TGCAACGCTAAATGCTATGGT 58.635 42.857 0.00 0.00 42.97 3.55
661 2418 3.108144 GTTGCAACGCTAAATGCTATGG 58.892 45.455 14.90 0.00 42.97 2.74
662 2419 3.757184 TGTTGCAACGCTAAATGCTATG 58.243 40.909 23.79 0.00 42.97 2.23
663 2420 4.142403 ACATGTTGCAACGCTAAATGCTAT 60.142 37.500 23.79 5.56 42.97 2.97
664 2421 3.190327 ACATGTTGCAACGCTAAATGCTA 59.810 39.130 23.79 3.27 42.97 3.49
665 2422 2.030007 ACATGTTGCAACGCTAAATGCT 60.030 40.909 23.79 9.67 42.97 3.79
666 2423 2.327568 ACATGTTGCAACGCTAAATGC 58.672 42.857 23.79 0.00 42.86 3.56
667 2424 7.186128 TCTTATACATGTTGCAACGCTAAATG 58.814 34.615 23.79 21.45 35.67 2.32
668 2425 7.065803 ACTCTTATACATGTTGCAACGCTAAAT 59.934 33.333 23.79 15.11 0.00 1.40
669 2426 6.370442 ACTCTTATACATGTTGCAACGCTAAA 59.630 34.615 23.79 7.06 0.00 1.85
670 2427 5.872617 ACTCTTATACATGTTGCAACGCTAA 59.127 36.000 23.79 14.43 0.00 3.09
671 2428 5.416083 ACTCTTATACATGTTGCAACGCTA 58.584 37.500 23.79 13.02 0.00 4.26
672 2429 4.253685 ACTCTTATACATGTTGCAACGCT 58.746 39.130 23.79 11.58 0.00 5.07
673 2430 4.330074 AGACTCTTATACATGTTGCAACGC 59.670 41.667 23.79 2.38 0.00 4.84
674 2431 6.243551 CAAGACTCTTATACATGTTGCAACG 58.756 40.000 23.79 13.41 0.00 4.10
675 2432 6.371548 TCCAAGACTCTTATACATGTTGCAAC 59.628 38.462 22.83 22.83 0.00 4.17
676 2433 6.472016 TCCAAGACTCTTATACATGTTGCAA 58.528 36.000 2.30 0.00 0.00 4.08
677 2434 6.048732 TCCAAGACTCTTATACATGTTGCA 57.951 37.500 2.30 0.00 0.00 4.08
678 2435 6.540189 ACATCCAAGACTCTTATACATGTTGC 59.460 38.462 2.30 0.00 0.00 4.17
679 2436 8.498054 AACATCCAAGACTCTTATACATGTTG 57.502 34.615 2.30 0.00 32.18 3.33
681 2438 9.988815 GATAACATCCAAGACTCTTATACATGT 57.011 33.333 2.69 2.69 0.00 3.21
724 2481 4.592485 TGCGCTTAGGGAAATTGAAAAA 57.408 36.364 9.73 0.00 0.00 1.94
725 2482 4.021544 ACATGCGCTTAGGGAAATTGAAAA 60.022 37.500 9.73 0.00 0.00 2.29
726 2483 3.509575 ACATGCGCTTAGGGAAATTGAAA 59.490 39.130 9.73 0.00 0.00 2.69
727 2484 3.088532 ACATGCGCTTAGGGAAATTGAA 58.911 40.909 9.73 0.00 0.00 2.69
728 2485 2.722094 ACATGCGCTTAGGGAAATTGA 58.278 42.857 9.73 0.00 0.00 2.57
729 2486 4.836125 ATACATGCGCTTAGGGAAATTG 57.164 40.909 9.73 0.00 0.00 2.32
730 2487 6.296026 TCTTATACATGCGCTTAGGGAAATT 58.704 36.000 9.73 0.00 0.00 1.82
731 2488 5.865085 TCTTATACATGCGCTTAGGGAAAT 58.135 37.500 9.73 0.00 0.00 2.17
732 2489 5.163343 ACTCTTATACATGCGCTTAGGGAAA 60.163 40.000 9.73 0.00 0.00 3.13
733 2490 4.344102 ACTCTTATACATGCGCTTAGGGAA 59.656 41.667 9.73 0.00 0.00 3.97
734 2491 3.895656 ACTCTTATACATGCGCTTAGGGA 59.104 43.478 9.73 0.00 0.00 4.20
735 2492 4.021894 AGACTCTTATACATGCGCTTAGGG 60.022 45.833 9.73 0.00 0.00 3.53
736 2493 5.127693 AGACTCTTATACATGCGCTTAGG 57.872 43.478 9.73 0.00 0.00 2.69
737 2494 5.107683 GCAAGACTCTTATACATGCGCTTAG 60.108 44.000 9.73 0.08 0.00 2.18
738 2495 4.745125 GCAAGACTCTTATACATGCGCTTA 59.255 41.667 9.73 0.00 0.00 3.09
739 2496 3.557595 GCAAGACTCTTATACATGCGCTT 59.442 43.478 9.73 0.00 0.00 4.68
740 2497 3.126831 GCAAGACTCTTATACATGCGCT 58.873 45.455 9.73 0.00 0.00 5.92
741 2498 2.866156 TGCAAGACTCTTATACATGCGC 59.134 45.455 0.00 0.00 35.18 6.09
742 2499 5.234972 TCAATGCAAGACTCTTATACATGCG 59.765 40.000 0.00 0.00 35.18 4.73
743 2500 6.609237 TCAATGCAAGACTCTTATACATGC 57.391 37.500 0.00 0.00 0.00 4.06
744 2501 8.429493 TCTTCAATGCAAGACTCTTATACATG 57.571 34.615 0.00 0.00 0.00 3.21
745 2502 9.107177 CTTCTTCAATGCAAGACTCTTATACAT 57.893 33.333 0.00 0.00 31.88 2.29
746 2503 7.065085 GCTTCTTCAATGCAAGACTCTTATACA 59.935 37.037 0.00 0.00 31.88 2.29
747 2504 7.405769 GCTTCTTCAATGCAAGACTCTTATAC 58.594 38.462 0.00 0.00 31.88 1.47
748 2505 6.540189 GGCTTCTTCAATGCAAGACTCTTATA 59.460 38.462 0.00 0.00 31.88 0.98
749 2506 5.356470 GGCTTCTTCAATGCAAGACTCTTAT 59.644 40.000 0.00 0.00 31.88 1.73
750 2507 4.697352 GGCTTCTTCAATGCAAGACTCTTA 59.303 41.667 0.00 0.00 31.88 2.10
751 2508 3.505293 GGCTTCTTCAATGCAAGACTCTT 59.495 43.478 0.00 0.00 31.88 2.85
752 2509 3.080319 GGCTTCTTCAATGCAAGACTCT 58.920 45.455 0.00 0.00 31.88 3.24
753 2510 2.163211 GGGCTTCTTCAATGCAAGACTC 59.837 50.000 0.00 0.00 31.88 3.36
754 2511 2.165998 GGGCTTCTTCAATGCAAGACT 58.834 47.619 0.00 0.00 31.88 3.24
755 2512 2.165998 AGGGCTTCTTCAATGCAAGAC 58.834 47.619 0.00 0.00 31.88 3.01
756 2513 2.592102 AGGGCTTCTTCAATGCAAGA 57.408 45.000 0.00 0.00 0.00 3.02
757 2514 4.202090 GGATTAGGGCTTCTTCAATGCAAG 60.202 45.833 0.00 0.00 0.00 4.01
758 2515 3.701040 GGATTAGGGCTTCTTCAATGCAA 59.299 43.478 0.00 0.00 0.00 4.08
759 2516 3.053395 AGGATTAGGGCTTCTTCAATGCA 60.053 43.478 0.00 0.00 0.00 3.96
760 2517 3.560105 AGGATTAGGGCTTCTTCAATGC 58.440 45.455 0.00 0.00 0.00 3.56
761 2518 4.140536 GGAGGATTAGGGCTTCTTCAATG 58.859 47.826 0.00 0.00 0.00 2.82
762 2519 4.050757 AGGAGGATTAGGGCTTCTTCAAT 58.949 43.478 0.00 0.00 0.00 2.57
763 2520 3.464828 AGGAGGATTAGGGCTTCTTCAA 58.535 45.455 0.00 0.00 0.00 2.69
764 2521 3.136641 AGGAGGATTAGGGCTTCTTCA 57.863 47.619 0.00 0.00 0.00 3.02
765 2522 4.511786 AAAGGAGGATTAGGGCTTCTTC 57.488 45.455 0.00 0.00 0.00 2.87
766 2523 4.955693 AAAAGGAGGATTAGGGCTTCTT 57.044 40.909 0.00 0.00 0.00 2.52
767 2524 6.011540 AGTTTAAAAGGAGGATTAGGGCTTCT 60.012 38.462 0.00 0.00 0.00 2.85
768 2525 6.188407 AGTTTAAAAGGAGGATTAGGGCTTC 58.812 40.000 0.00 0.00 0.00 3.86
769 2526 6.153942 AGTTTAAAAGGAGGATTAGGGCTT 57.846 37.500 0.00 0.00 0.00 4.35
770 2527 5.798239 AGTTTAAAAGGAGGATTAGGGCT 57.202 39.130 0.00 0.00 0.00 5.19
771 2528 6.888088 TGTAAGTTTAAAAGGAGGATTAGGGC 59.112 38.462 0.00 0.00 0.00 5.19
772 2529 8.873186 TTGTAAGTTTAAAAGGAGGATTAGGG 57.127 34.615 0.00 0.00 0.00 3.53
844 2601 9.310716 GGAAAACAATACCATGTACTACTCTAC 57.689 37.037 0.00 0.00 32.02 2.59
845 2602 9.263446 AGGAAAACAATACCATGTACTACTCTA 57.737 33.333 0.00 0.00 32.02 2.43
846 2603 8.147244 AGGAAAACAATACCATGTACTACTCT 57.853 34.615 0.00 0.00 32.02 3.24
847 2604 8.788325 AAGGAAAACAATACCATGTACTACTC 57.212 34.615 0.00 0.00 32.02 2.59
848 2605 9.582648 AAAAGGAAAACAATACCATGTACTACT 57.417 29.630 0.00 0.00 32.02 2.57
849 2606 9.620660 CAAAAGGAAAACAATACCATGTACTAC 57.379 33.333 0.00 0.00 32.02 2.73
852 2609 6.871492 CCCAAAAGGAAAACAATACCATGTAC 59.129 38.462 0.00 0.00 38.24 2.90
853 2610 6.519213 GCCCAAAAGGAAAACAATACCATGTA 60.519 38.462 0.00 0.00 38.24 2.29
854 2611 5.744594 GCCCAAAAGGAAAACAATACCATGT 60.745 40.000 0.00 0.00 38.24 3.21
855 2612 4.694982 GCCCAAAAGGAAAACAATACCATG 59.305 41.667 0.00 0.00 38.24 3.66
856 2613 4.349342 TGCCCAAAAGGAAAACAATACCAT 59.651 37.500 0.00 0.00 38.24 3.55
857 2614 3.711704 TGCCCAAAAGGAAAACAATACCA 59.288 39.130 0.00 0.00 38.24 3.25
880 2642 2.879154 TGTACCTGTACTAGCACACCA 58.121 47.619 8.75 0.00 37.00 4.17
882 2644 4.879598 AGTTTGTACCTGTACTAGCACAC 58.120 43.478 8.75 0.00 37.00 3.82
883 2645 5.540400 AAGTTTGTACCTGTACTAGCACA 57.460 39.130 8.75 0.00 37.00 4.57
884 2646 6.346359 CGAAAAGTTTGTACCTGTACTAGCAC 60.346 42.308 8.75 0.00 37.00 4.40
885 2647 5.693104 CGAAAAGTTTGTACCTGTACTAGCA 59.307 40.000 8.75 0.00 37.00 3.49
903 2671 3.862267 CCAGAGCTGTAGACATCGAAAAG 59.138 47.826 0.00 0.00 0.00 2.27
907 2675 0.741326 GCCAGAGCTGTAGACATCGA 59.259 55.000 0.00 0.00 35.50 3.59
908 2676 0.249238 GGCCAGAGCTGTAGACATCG 60.249 60.000 0.00 0.00 39.73 3.84
909 2677 0.826715 TGGCCAGAGCTGTAGACATC 59.173 55.000 0.00 0.00 39.73 3.06
910 2678 1.279496 TTGGCCAGAGCTGTAGACAT 58.721 50.000 5.11 0.00 39.73 3.06
911 2679 1.055849 TTTGGCCAGAGCTGTAGACA 58.944 50.000 5.11 0.00 39.73 3.41
912 2680 2.185004 TTTTGGCCAGAGCTGTAGAC 57.815 50.000 5.11 0.00 39.73 2.59
913 2681 2.949177 TTTTTGGCCAGAGCTGTAGA 57.051 45.000 5.11 0.00 39.73 2.59
1054 2835 3.379445 GGCGGAGTGGAGGACGAA 61.379 66.667 0.00 0.00 0.00 3.85
1203 2984 1.293498 GGCCTTGTCGCTCTTCTCA 59.707 57.895 0.00 0.00 0.00 3.27
1601 3387 2.455674 TTTATGCTCGCACTGTGACT 57.544 45.000 12.86 0.00 0.00 3.41
1602 3388 3.747099 ATTTTATGCTCGCACTGTGAC 57.253 42.857 12.86 2.04 0.00 3.67
1603 3389 3.670359 GCAATTTTATGCTCGCACTGTGA 60.670 43.478 12.86 0.00 43.06 3.58
1604 3390 2.595536 GCAATTTTATGCTCGCACTGTG 59.404 45.455 2.76 2.76 43.06 3.66
1605 3391 2.867429 GCAATTTTATGCTCGCACTGT 58.133 42.857 0.00 0.00 43.06 3.55
1667 3481 4.896482 CCTACTGTACCTTCTTGCCTCTAT 59.104 45.833 0.00 0.00 0.00 1.98
1769 3583 3.133691 CGTGTCTAATGACCCCATGATG 58.866 50.000 0.00 0.00 42.28 3.07
1803 3617 4.038042 GTGATCAGATGGTAATCCGTGAGA 59.962 45.833 0.00 0.00 36.30 3.27
1841 3695 4.933400 GCACCGATACTTAAAGTTCTTCCA 59.067 41.667 0.00 0.00 0.00 3.53
1860 3715 5.459110 TCGAAAGTATACGAAAATGCACC 57.541 39.130 0.00 0.00 35.62 5.01
1870 3725 5.359716 AGCAGATACCTCGAAAGTATACG 57.640 43.478 7.55 4.28 30.57 3.06
1889 3744 4.616604 GCAATCAAGCAACATCTGTAAGCA 60.617 41.667 9.44 0.00 33.40 3.91
2046 3906 4.832266 ACAACCAAATGTAGCAATCCTTCA 59.168 37.500 0.00 0.00 0.00 3.02
2666 4526 7.090808 TGCTAGTAATAGATATCAAGGTTGCG 58.909 38.462 5.32 0.00 0.00 4.85
2702 4562 4.687948 CCACATAGGAAAGCTGATGTATCG 59.312 45.833 0.00 0.00 41.22 2.92
2909 4796 3.501349 ACTTCTGACAGGCTTCAGTAGA 58.499 45.455 25.07 14.06 41.30 2.59
2914 4804 3.239449 TCCTAACTTCTGACAGGCTTCA 58.761 45.455 1.81 0.00 0.00 3.02
2972 4862 6.015603 TGTCACATCAATGGCAATCTTAACAA 60.016 34.615 0.00 0.00 29.24 2.83
3016 4906 4.814147 TCATCTGTGATCTGACACACTTC 58.186 43.478 14.62 0.00 44.29 3.01
3127 5104 6.395426 TCAGACAAGTTGAATGCTTTTCAT 57.605 33.333 10.54 0.00 36.87 2.57
3288 5277 1.192146 TCAGACCGGCTAAAGCACCT 61.192 55.000 0.00 0.00 44.36 4.00
3441 5430 8.275632 GCATTCAAGTAACCAAATTTCAAGAAC 58.724 33.333 0.00 0.00 0.00 3.01
3488 5477 8.024145 TGGTACAATTTTGTTCACCCTAAAAT 57.976 30.769 11.16 0.00 38.46 1.82
3876 5866 3.309682 CACATGTATGTCGGGTCAACATC 59.690 47.826 0.00 0.00 39.39 3.06
3906 5896 7.148474 GCGGATGTAAACTCAACAAAGAGATAA 60.148 37.037 0.00 0.00 38.98 1.75
4113 6689 2.202932 CCAGGAATGAGCGACCCG 60.203 66.667 0.00 0.00 0.00 5.28
4165 6741 6.596309 TGAATCCGAGCAGTAGATGAATAT 57.404 37.500 0.00 0.00 0.00 1.28
4166 6742 6.015095 ACATGAATCCGAGCAGTAGATGAATA 60.015 38.462 0.00 0.00 0.00 1.75
4167 6743 4.944619 TGAATCCGAGCAGTAGATGAAT 57.055 40.909 0.00 0.00 0.00 2.57
4168 6744 4.100035 ACATGAATCCGAGCAGTAGATGAA 59.900 41.667 0.00 0.00 0.00 2.57
4169 6745 3.638627 ACATGAATCCGAGCAGTAGATGA 59.361 43.478 0.00 0.00 0.00 2.92
4170 6746 3.739810 CACATGAATCCGAGCAGTAGATG 59.260 47.826 0.00 0.00 0.00 2.90
4171 6747 3.386078 ACACATGAATCCGAGCAGTAGAT 59.614 43.478 0.00 0.00 0.00 1.98
4172 6748 2.760650 ACACATGAATCCGAGCAGTAGA 59.239 45.455 0.00 0.00 0.00 2.59
4173 6749 3.119291 GACACATGAATCCGAGCAGTAG 58.881 50.000 0.00 0.00 0.00 2.57
4174 6750 2.479560 CGACACATGAATCCGAGCAGTA 60.480 50.000 0.00 0.00 0.00 2.74
4175 6751 1.737029 CGACACATGAATCCGAGCAGT 60.737 52.381 0.00 0.00 0.00 4.40
4176 6752 0.926155 CGACACATGAATCCGAGCAG 59.074 55.000 0.00 0.00 0.00 4.24
4177 6753 0.530288 TCGACACATGAATCCGAGCA 59.470 50.000 0.00 0.00 0.00 4.26
4178 6754 1.202302 TCTCGACACATGAATCCGAGC 60.202 52.381 18.86 0.00 44.28 5.03
4179 6755 2.455032 GTCTCGACACATGAATCCGAG 58.545 52.381 18.12 18.12 45.50 4.63
4180 6756 1.202143 CGTCTCGACACATGAATCCGA 60.202 52.381 0.00 1.98 0.00 4.55
4181 6757 1.191944 CGTCTCGACACATGAATCCG 58.808 55.000 0.00 0.00 0.00 4.18
4182 6758 1.920574 CACGTCTCGACACATGAATCC 59.079 52.381 0.00 0.00 0.00 3.01
4183 6759 2.848887 CTCACGTCTCGACACATGAATC 59.151 50.000 0.00 0.00 0.00 2.52
4184 6760 2.488153 TCTCACGTCTCGACACATGAAT 59.512 45.455 0.00 0.00 0.00 2.57
4185 6761 1.877443 TCTCACGTCTCGACACATGAA 59.123 47.619 0.00 0.00 0.00 2.57
4186 6762 1.197036 GTCTCACGTCTCGACACATGA 59.803 52.381 0.00 0.00 0.00 3.07
4187 6763 1.607713 GTCTCACGTCTCGACACATG 58.392 55.000 0.00 0.00 0.00 3.21
4188 6764 0.522180 GGTCTCACGTCTCGACACAT 59.478 55.000 9.69 0.00 0.00 3.21
4189 6765 0.816421 TGGTCTCACGTCTCGACACA 60.816 55.000 9.69 4.16 0.00 3.72
4190 6766 0.522180 ATGGTCTCACGTCTCGACAC 59.478 55.000 9.69 0.00 0.00 3.67
4191 6767 0.803117 GATGGTCTCACGTCTCGACA 59.197 55.000 9.69 0.00 0.00 4.35
4192 6768 1.088306 AGATGGTCTCACGTCTCGAC 58.912 55.000 0.00 0.00 31.19 4.20
4193 6769 1.822506 AAGATGGTCTCACGTCTCGA 58.177 50.000 0.00 0.00 35.74 4.04
4194 6770 2.937149 TCTAAGATGGTCTCACGTCTCG 59.063 50.000 0.00 0.00 35.74 4.04
4195 6771 3.942748 ACTCTAAGATGGTCTCACGTCTC 59.057 47.826 0.00 0.00 35.74 3.36
4196 6772 3.958018 ACTCTAAGATGGTCTCACGTCT 58.042 45.455 0.00 0.00 38.32 4.18
4197 6773 4.416620 CAACTCTAAGATGGTCTCACGTC 58.583 47.826 0.00 0.00 0.00 4.34
4198 6774 3.193691 CCAACTCTAAGATGGTCTCACGT 59.806 47.826 0.00 0.00 33.90 4.49
4199 6775 3.429547 CCCAACTCTAAGATGGTCTCACG 60.430 52.174 3.03 0.00 36.52 4.35
4200 6776 3.680196 GCCCAACTCTAAGATGGTCTCAC 60.680 52.174 3.03 0.00 36.52 3.51
4201 6777 2.501723 GCCCAACTCTAAGATGGTCTCA 59.498 50.000 3.03 0.00 36.52 3.27
4202 6778 2.769095 AGCCCAACTCTAAGATGGTCTC 59.231 50.000 3.03 0.00 36.52 3.36
4203 6779 2.769095 GAGCCCAACTCTAAGATGGTCT 59.231 50.000 3.03 0.00 42.62 3.85
4204 6780 2.501723 TGAGCCCAACTCTAAGATGGTC 59.498 50.000 3.03 0.00 46.41 4.02
4205 6781 2.551270 TGAGCCCAACTCTAAGATGGT 58.449 47.619 3.03 0.00 46.41 3.55
4206 6782 3.853355 ATGAGCCCAACTCTAAGATGG 57.147 47.619 0.00 0.00 46.41 3.51
4207 6783 6.767456 AGATTATGAGCCCAACTCTAAGATG 58.233 40.000 0.00 0.00 46.41 2.90
4208 6784 6.556495 TGAGATTATGAGCCCAACTCTAAGAT 59.444 38.462 0.00 0.00 46.41 2.40
4209 6785 5.899547 TGAGATTATGAGCCCAACTCTAAGA 59.100 40.000 0.00 0.00 46.41 2.10
4210 6786 6.166984 TGAGATTATGAGCCCAACTCTAAG 57.833 41.667 0.00 0.00 46.41 2.18
4211 6787 6.100279 ACATGAGATTATGAGCCCAACTCTAA 59.900 38.462 0.00 0.00 46.41 2.10
4212 6788 5.604231 ACATGAGATTATGAGCCCAACTCTA 59.396 40.000 0.00 0.00 46.41 2.43
4213 6789 4.411540 ACATGAGATTATGAGCCCAACTCT 59.588 41.667 0.00 0.00 46.41 3.24
4214 6790 4.712476 ACATGAGATTATGAGCCCAACTC 58.288 43.478 0.00 0.00 46.45 3.01
4215 6791 4.785346 ACATGAGATTATGAGCCCAACT 57.215 40.909 0.00 0.00 0.00 3.16
4216 6792 5.841957 AAACATGAGATTATGAGCCCAAC 57.158 39.130 0.00 0.00 0.00 3.77
4217 6793 5.716228 ACAAAACATGAGATTATGAGCCCAA 59.284 36.000 0.00 0.00 0.00 4.12
4218 6794 5.263599 ACAAAACATGAGATTATGAGCCCA 58.736 37.500 0.00 0.00 0.00 5.36
4219 6795 5.357878 TGACAAAACATGAGATTATGAGCCC 59.642 40.000 0.00 0.00 0.00 5.19
4220 6796 6.441093 TGACAAAACATGAGATTATGAGCC 57.559 37.500 0.00 0.00 0.00 4.70
4367 7111 3.628487 CCCTTCACGTACAAGGACAAAAA 59.372 43.478 21.80 0.00 42.94 1.94
4382 7126 2.052782 ATAAATCACGCCCCCTTCAC 57.947 50.000 0.00 0.00 0.00 3.18
4391 7135 6.018994 AGACTCGGAATGTAAATAAATCACGC 60.019 38.462 0.00 0.00 0.00 5.34
4437 7181 3.383620 TGTTCGCCAAAAAGCAATGAT 57.616 38.095 0.00 0.00 0.00 2.45
4450 7194 2.584791 CAGCTTTGTGTTATGTTCGCC 58.415 47.619 0.00 0.00 0.00 5.54
4585 7329 4.635699 AGGTACAAGGAGACCGATTTTT 57.364 40.909 0.00 0.00 40.91 1.94
4627 7371 3.416382 CCCCAACACGCCGTTACG 61.416 66.667 0.00 0.00 35.52 3.18
4634 7378 2.676471 ATCAAGGCCCCAACACGC 60.676 61.111 0.00 0.00 0.00 5.34
4724 7468 2.105477 AGTTAGCAGCCACATCCTATGG 59.895 50.000 0.00 0.00 40.50 2.74
4790 7534 1.412343 AGTTTTCACCATTTTGGCGCT 59.588 42.857 7.64 0.00 42.67 5.92
4841 7586 7.114388 GCGTTCCCTTTTTACTCTACAAAAATG 59.886 37.037 0.00 0.00 35.09 2.32
4976 7721 5.248477 ACTCAGGTAGTATTTGCCAAAGAGA 59.752 40.000 5.99 0.00 36.36 3.10
4988 7733 5.180810 TCACTCTGTCACTCAGGTAGTAT 57.819 43.478 0.00 0.00 43.76 2.12
5043 8021 5.603170 ATTCATTTCCATGTGCCTAAAGG 57.397 39.130 0.00 0.00 38.53 3.11
5044 8022 6.183360 GCAAATTCATTTCCATGTGCCTAAAG 60.183 38.462 0.00 0.00 0.00 1.85
5045 8023 5.642919 GCAAATTCATTTCCATGTGCCTAAA 59.357 36.000 0.00 0.00 0.00 1.85
5046 8024 5.177326 GCAAATTCATTTCCATGTGCCTAA 58.823 37.500 0.00 0.00 0.00 2.69
5047 8025 4.222366 TGCAAATTCATTTCCATGTGCCTA 59.778 37.500 0.00 0.00 30.89 3.93
5048 8026 3.008157 TGCAAATTCATTTCCATGTGCCT 59.992 39.130 0.00 0.00 30.89 4.75
5049 8027 3.336468 TGCAAATTCATTTCCATGTGCC 58.664 40.909 0.00 0.00 30.89 5.01
5096 8074 0.982852 ATCTCATCAAGGCCCCGTCA 60.983 55.000 0.00 0.00 0.00 4.35
5097 8075 0.533755 CATCTCATCAAGGCCCCGTC 60.534 60.000 0.00 0.00 0.00 4.79
5098 8076 1.528824 CATCTCATCAAGGCCCCGT 59.471 57.895 0.00 0.00 0.00 5.28
5100 8078 0.552848 TTCCATCTCATCAAGGCCCC 59.447 55.000 0.00 0.00 0.00 5.80
5101 8079 1.064463 TGTTCCATCTCATCAAGGCCC 60.064 52.381 0.00 0.00 0.00 5.80
5102 8080 2.425143 TGTTCCATCTCATCAAGGCC 57.575 50.000 0.00 0.00 0.00 5.19
5103 8081 3.760684 ACTTTGTTCCATCTCATCAAGGC 59.239 43.478 0.00 0.00 0.00 4.35
5104 8082 7.636150 AATACTTTGTTCCATCTCATCAAGG 57.364 36.000 0.00 0.00 0.00 3.61
5105 8083 8.906636 CAAATACTTTGTTCCATCTCATCAAG 57.093 34.615 0.00 0.00 35.94 3.02
5199 8205 5.850557 TGGTGAATTGAGATGTTGTTTGT 57.149 34.783 0.00 0.00 0.00 2.83
5203 8209 5.850557 TGTTTGGTGAATTGAGATGTTGT 57.149 34.783 0.00 0.00 0.00 3.32
5380 8392 4.422073 AGAATGACTGACAAGTGACCAA 57.578 40.909 0.00 0.00 36.52 3.67
5511 8523 6.428385 AAGAAATCAAAGGACACGATCATC 57.572 37.500 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.