Multiple sequence alignment - TraesCS6B01G110300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G110300 chr6B 100.000 1534 0 0 1684 3217 92532044 92530511 0.000000e+00 2833
1 TraesCS6B01G110300 chr6B 100.000 1346 0 0 1 1346 92533727 92532382 0.000000e+00 2486
2 TraesCS6B01G110300 chr6B 98.340 964 6 2 1 964 92541832 92540879 0.000000e+00 1683
3 TraesCS6B01G110300 chr6B 94.371 977 38 12 1 964 404312751 404311779 0.000000e+00 1483
4 TraesCS6B01G110300 chr6B 92.308 364 28 0 983 1346 98992206 98992569 4.760000e-143 518
5 TraesCS6B01G110300 chr5B 86.429 980 81 40 1 964 488677321 488678264 0.000000e+00 1026
6 TraesCS6B01G110300 chr5B 94.222 225 13 0 2993 3217 137416646 137416870 8.540000e-91 344
7 TraesCS6B01G110300 chr4B 86.049 982 86 35 1 964 264379814 264378866 0.000000e+00 1007
8 TraesCS6B01G110300 chr4B 94.348 230 13 0 2988 3217 273248341 273248112 1.420000e-93 353
9 TraesCS6B01G110300 chr1B 86.035 981 84 40 5 964 209776907 209777855 0.000000e+00 1003
10 TraesCS6B01G110300 chr1B 93.478 230 15 0 2988 3217 260325977 260326206 3.070000e-90 342
11 TraesCS6B01G110300 chr3B 85.802 979 85 41 5 964 120191508 120190565 0.000000e+00 989
12 TraesCS6B01G110300 chr3B 93.913 230 13 1 2989 3217 468918346 468918575 2.380000e-91 346
13 TraesCS6B01G110300 chr6A 85.126 995 94 41 5 975 97686459 97687423 0.000000e+00 968
14 TraesCS6B01G110300 chr6A 97.067 375 11 0 965 1339 55893232 55892858 1.630000e-177 632
15 TraesCS6B01G110300 chr6A 93.407 364 24 0 983 1346 55709390 55709753 1.020000e-149 540
16 TraesCS6B01G110300 chr2A 92.868 659 25 19 317 964 118811584 118812231 0.000000e+00 937
17 TraesCS6B01G110300 chr2A 92.868 659 25 19 317 964 118819774 118820421 0.000000e+00 937
18 TraesCS6B01G110300 chr5A 84.756 984 91 47 5 964 354854642 354855590 0.000000e+00 931
19 TraesCS6B01G110300 chrUn 86.667 840 62 20 1684 2503 20705783 20706592 0.000000e+00 885
20 TraesCS6B01G110300 chrUn 82.341 991 112 49 5 964 446835426 446834468 0.000000e+00 802
21 TraesCS6B01G110300 chrUn 88.770 561 51 10 1715 2273 20430876 20431426 0.000000e+00 676
22 TraesCS6B01G110300 chrUn 94.503 382 21 0 965 1346 20705468 20705849 9.940000e-165 590
23 TraesCS6B01G110300 chrUn 94.503 382 16 2 965 1346 20430111 20430487 4.620000e-163 584
24 TraesCS6B01G110300 chrUn 91.872 406 32 1 1684 2089 20705555 20705959 1.680000e-157 566
25 TraesCS6B01G110300 chrUn 91.176 408 32 2 1754 2161 20923076 20922673 4.690000e-153 551
26 TraesCS6B01G110300 chrUn 94.222 225 13 0 2993 3217 176288203 176288427 8.540000e-91 344
27 TraesCS6B01G110300 chrUn 94.222 225 13 0 2993 3217 441119117 441119341 8.540000e-91 344
28 TraesCS6B01G110300 chr2B 82.341 991 112 48 5 964 422821989 422822947 0.000000e+00 802
29 TraesCS6B01G110300 chr7D 89.792 480 42 6 1684 2161 562257198 562256724 2.740000e-170 608
30 TraesCS6B01G110300 chr7D 89.167 480 47 3 1684 2161 562148679 562148203 7.680000e-166 593
31 TraesCS6B01G110300 chr7D 93.352 361 23 1 987 1346 562149201 562148841 1.700000e-147 532
32 TraesCS6B01G110300 chr7D 90.576 382 32 4 967 1346 562424840 562425219 1.330000e-138 503
33 TraesCS6B01G110300 chr7D 94.222 225 13 0 2993 3217 509902059 509902283 8.540000e-91 344
34 TraesCS6B01G110300 chr7A 89.294 439 41 6 1711 2145 647306341 647305905 2.180000e-151 545
35 TraesCS6B01G110300 chr7A 87.991 458 52 3 1684 2139 647315556 647315100 3.650000e-149 538
36 TraesCS6B01G110300 chr7A 92.798 361 25 1 987 1346 647307628 647307268 3.680000e-144 521
37 TraesCS6B01G110300 chr7B 88.584 438 48 2 1684 2121 611962108 611961673 6.110000e-147 531
38 TraesCS6B01G110300 chr7B 92.958 355 25 0 992 1346 611962756 611962402 4.760000e-143 518
39 TraesCS6B01G110300 chr3D 93.191 235 16 0 2983 3217 75085171 75084937 2.380000e-91 346
40 TraesCS6B01G110300 chr1D 94.222 225 13 0 2993 3217 120222576 120222352 8.540000e-91 344
41 TraesCS6B01G110300 chr3A 81.333 150 12 9 2762 2901 584751499 584751642 1.220000e-19 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G110300 chr6B 92530511 92533727 3216 True 2659.500000 2833 100.0000 1 3217 2 chr6B.!!$R3 3216
1 TraesCS6B01G110300 chr6B 92540879 92541832 953 True 1683.000000 1683 98.3400 1 964 1 chr6B.!!$R1 963
2 TraesCS6B01G110300 chr6B 404311779 404312751 972 True 1483.000000 1483 94.3710 1 964 1 chr6B.!!$R2 963
3 TraesCS6B01G110300 chr5B 488677321 488678264 943 False 1026.000000 1026 86.4290 1 964 1 chr5B.!!$F2 963
4 TraesCS6B01G110300 chr4B 264378866 264379814 948 True 1007.000000 1007 86.0490 1 964 1 chr4B.!!$R1 963
5 TraesCS6B01G110300 chr1B 209776907 209777855 948 False 1003.000000 1003 86.0350 5 964 1 chr1B.!!$F1 959
6 TraesCS6B01G110300 chr3B 120190565 120191508 943 True 989.000000 989 85.8020 5 964 1 chr3B.!!$R1 959
7 TraesCS6B01G110300 chr6A 97686459 97687423 964 False 968.000000 968 85.1260 5 975 1 chr6A.!!$F2 970
8 TraesCS6B01G110300 chr2A 118811584 118812231 647 False 937.000000 937 92.8680 317 964 1 chr2A.!!$F1 647
9 TraesCS6B01G110300 chr2A 118819774 118820421 647 False 937.000000 937 92.8680 317 964 1 chr2A.!!$F2 647
10 TraesCS6B01G110300 chr5A 354854642 354855590 948 False 931.000000 931 84.7560 5 964 1 chr5A.!!$F1 959
11 TraesCS6B01G110300 chrUn 446834468 446835426 958 True 802.000000 802 82.3410 5 964 1 chrUn.!!$R2 959
12 TraesCS6B01G110300 chrUn 20705468 20706592 1124 False 680.333333 885 91.0140 965 2503 3 chrUn.!!$F4 1538
13 TraesCS6B01G110300 chrUn 20430111 20431426 1315 False 630.000000 676 91.6365 965 2273 2 chrUn.!!$F3 1308
14 TraesCS6B01G110300 chr2B 422821989 422822947 958 False 802.000000 802 82.3410 5 964 1 chr2B.!!$F1 959
15 TraesCS6B01G110300 chr7D 562148203 562149201 998 True 562.500000 593 91.2595 987 2161 2 chr7D.!!$R2 1174
16 TraesCS6B01G110300 chr7A 647305905 647307628 1723 True 533.000000 545 91.0460 987 2145 2 chr7A.!!$R2 1158
17 TraesCS6B01G110300 chr7B 611961673 611962756 1083 True 524.500000 531 90.7710 992 2121 2 chr7B.!!$R1 1129

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
464 480 3.246112 TGGCGCCAGGTAAGTGGT 61.246 61.111 29.03 0.0 40.09 4.16 F
1704 2558 0.320374 GTCCTCGGACACCATTGACA 59.680 55.000 11.12 0.0 44.02 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1718 2572 0.036388 TGCCTTCCTTGTCGTGGATC 60.036 55.0 0.00 0.0 33.09 3.36 R
2991 4595 0.108992 GTGGCAGTTATCGACGTCCA 60.109 55.0 10.58 0.0 33.94 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
464 480 3.246112 TGGCGCCAGGTAAGTGGT 61.246 61.111 29.03 0.00 40.09 4.16
973 1029 3.724478 AGGGATGTGACATCCTTACTCA 58.276 45.455 35.60 0.00 38.26 3.41
983 1039 5.546499 TGACATCCTTACTCAGGGTTTACTT 59.454 40.000 0.00 0.00 44.12 2.24
1058 1488 1.965219 CCCTTGAGGTCGAGTCGTT 59.035 57.895 13.12 0.00 0.00 3.85
1159 1589 0.680280 CAAGCAGCTTGAGGATGGCT 60.680 55.000 28.50 0.00 43.42 4.75
1272 1702 2.163454 TGGCAAGACCATCACCCTT 58.837 52.632 0.00 0.00 46.36 3.95
1701 2555 3.442996 GAGTCCTCGGACACCATTG 57.557 57.895 17.68 0.00 46.76 2.82
1702 2556 0.895530 GAGTCCTCGGACACCATTGA 59.104 55.000 17.68 0.00 46.76 2.57
1703 2557 0.608640 AGTCCTCGGACACCATTGAC 59.391 55.000 17.68 0.00 46.76 3.18
1704 2558 0.320374 GTCCTCGGACACCATTGACA 59.680 55.000 11.12 0.00 44.02 3.58
1705 2559 1.052617 TCCTCGGACACCATTGACAA 58.947 50.000 0.00 0.00 0.00 3.18
1706 2560 1.628340 TCCTCGGACACCATTGACAAT 59.372 47.619 0.00 0.00 0.00 2.71
1707 2561 1.739466 CCTCGGACACCATTGACAATG 59.261 52.381 19.42 19.42 38.63 2.82
1708 2562 2.426522 CTCGGACACCATTGACAATGT 58.573 47.619 23.27 9.67 37.18 2.71
1709 2563 2.150390 TCGGACACCATTGACAATGTG 58.850 47.619 23.27 21.43 37.18 3.21
1710 2564 2.150390 CGGACACCATTGACAATGTGA 58.850 47.619 23.27 0.00 37.18 3.58
1711 2565 2.551887 CGGACACCATTGACAATGTGAA 59.448 45.455 23.27 0.00 37.18 3.18
1712 2566 3.365264 CGGACACCATTGACAATGTGAAG 60.365 47.826 23.27 12.49 37.18 3.02
1713 2567 3.057315 GGACACCATTGACAATGTGAAGG 60.057 47.826 23.27 12.41 37.18 3.46
1714 2568 2.297033 ACACCATTGACAATGTGAAGGC 59.703 45.455 23.27 0.00 37.18 4.35
1715 2569 2.296752 CACCATTGACAATGTGAAGGCA 59.703 45.455 23.27 0.00 37.18 4.75
1716 2570 2.964464 ACCATTGACAATGTGAAGGCAA 59.036 40.909 23.27 0.00 37.18 4.52
1717 2571 3.387374 ACCATTGACAATGTGAAGGCAAA 59.613 39.130 23.27 0.00 37.18 3.68
1718 2572 3.991773 CCATTGACAATGTGAAGGCAAAG 59.008 43.478 23.27 3.92 37.18 2.77
1719 2573 4.262121 CCATTGACAATGTGAAGGCAAAGA 60.262 41.667 23.27 0.00 37.18 2.52
1720 2574 5.475719 CATTGACAATGTGAAGGCAAAGAT 58.524 37.500 18.34 0.00 34.18 2.40
1721 2575 4.771590 TGACAATGTGAAGGCAAAGATC 57.228 40.909 0.00 0.00 0.00 2.75
1722 2576 3.507233 TGACAATGTGAAGGCAAAGATCC 59.493 43.478 0.00 0.00 0.00 3.36
1723 2577 3.499338 ACAATGTGAAGGCAAAGATCCA 58.501 40.909 0.00 0.00 0.00 3.41
1724 2578 3.256631 ACAATGTGAAGGCAAAGATCCAC 59.743 43.478 0.00 0.00 0.00 4.02
1725 2579 1.522668 TGTGAAGGCAAAGATCCACG 58.477 50.000 0.00 0.00 0.00 4.94
1726 2580 1.071542 TGTGAAGGCAAAGATCCACGA 59.928 47.619 0.00 0.00 0.00 4.35
1727 2581 1.464997 GTGAAGGCAAAGATCCACGAC 59.535 52.381 0.00 0.00 0.00 4.34
1728 2582 1.071542 TGAAGGCAAAGATCCACGACA 59.928 47.619 0.00 0.00 0.00 4.35
1729 2583 2.151202 GAAGGCAAAGATCCACGACAA 58.849 47.619 0.00 0.00 0.00 3.18
1730 2584 1.813513 AGGCAAAGATCCACGACAAG 58.186 50.000 0.00 0.00 0.00 3.16
1731 2585 0.804989 GGCAAAGATCCACGACAAGG 59.195 55.000 0.00 0.00 0.00 3.61
1732 2586 1.610624 GGCAAAGATCCACGACAAGGA 60.611 52.381 0.00 0.00 39.97 3.36
1733 2587 2.151202 GCAAAGATCCACGACAAGGAA 58.849 47.619 0.00 0.00 38.93 3.36
1734 2588 2.160417 GCAAAGATCCACGACAAGGAAG 59.840 50.000 0.00 0.00 38.93 3.46
1735 2589 2.744202 CAAAGATCCACGACAAGGAAGG 59.256 50.000 0.00 0.00 38.93 3.46
1736 2590 0.250513 AGATCCACGACAAGGAAGGC 59.749 55.000 0.00 0.00 38.93 4.35
1737 2591 0.036388 GATCCACGACAAGGAAGGCA 60.036 55.000 0.00 0.00 38.93 4.75
1738 2592 0.620556 ATCCACGACAAGGAAGGCAT 59.379 50.000 0.00 0.00 38.93 4.40
1739 2593 0.036388 TCCACGACAAGGAAGGCATC 60.036 55.000 0.00 0.00 30.71 3.91
1747 2601 2.768344 GGAAGGCATCCCTCCGGA 60.768 66.667 2.93 2.93 41.90 5.14
1748 2602 2.506472 GAAGGCATCCCTCCGGAC 59.494 66.667 0.00 0.00 42.48 4.79
1749 2603 3.090532 AAGGCATCCCTCCGGACC 61.091 66.667 0.00 0.00 42.48 4.46
1871 3085 1.307097 GTGGAGGCATGCAGATCTTC 58.693 55.000 21.36 6.52 0.00 2.87
1883 3097 2.886081 CAGATCTTCGTCAAGACCCTG 58.114 52.381 0.00 4.70 41.64 4.45
1944 3158 0.948623 CCATCGACAACGTGAAGGCA 60.949 55.000 0.00 0.00 40.69 4.75
2016 3594 2.817396 GGCAAGCAGCTCGAGGAC 60.817 66.667 15.58 0.00 44.79 3.85
2118 3696 2.262471 CTGCTCATGGCGCTGTTTCC 62.262 60.000 7.64 0.00 45.43 3.13
2145 3728 0.468226 GGTTCACAGGTCTGGTGTCA 59.532 55.000 2.87 0.00 37.52 3.58
2161 3744 3.596214 GTGTCATCGGTGTACTCCAATT 58.404 45.455 14.09 0.00 0.00 2.32
2162 3745 3.617263 GTGTCATCGGTGTACTCCAATTC 59.383 47.826 14.09 0.00 0.00 2.17
2163 3746 3.513912 TGTCATCGGTGTACTCCAATTCT 59.486 43.478 14.09 0.00 0.00 2.40
2178 3780 6.037786 TCCAATTCTGTCGTGTTTCTATCT 57.962 37.500 0.00 0.00 0.00 1.98
2182 3784 5.707242 TTCTGTCGTGTTTCTATCTCTGT 57.293 39.130 0.00 0.00 0.00 3.41
2266 3869 5.313712 ACGTGATGAATAAGTGAACCCTTT 58.686 37.500 0.00 0.00 0.00 3.11
2277 3880 5.416271 AGTGAACCCTTTATATCGTGTGT 57.584 39.130 0.00 0.00 0.00 3.72
2280 3883 7.562135 AGTGAACCCTTTATATCGTGTGTAAT 58.438 34.615 0.00 0.00 0.00 1.89
2305 3908 0.109781 CGTTTGTGCCATACCTGTGC 60.110 55.000 0.00 0.00 0.00 4.57
2308 3911 1.243342 TTGTGCCATACCTGTGCTGC 61.243 55.000 0.00 0.00 0.00 5.25
2310 3913 0.107703 GTGCCATACCTGTGCTGCTA 60.108 55.000 0.00 0.00 0.00 3.49
2311 3914 0.107703 TGCCATACCTGTGCTGCTAC 60.108 55.000 0.00 0.00 0.00 3.58
2313 3916 1.412710 GCCATACCTGTGCTGCTACTA 59.587 52.381 0.00 0.00 0.00 1.82
2316 3919 3.491619 CCATACCTGTGCTGCTACTACTG 60.492 52.174 0.00 0.00 0.00 2.74
2328 3931 5.405935 TGCTACTACTGCAGATTCTTGAA 57.594 39.130 23.35 0.00 35.31 2.69
2329 3932 5.171476 TGCTACTACTGCAGATTCTTGAAC 58.829 41.667 23.35 1.68 35.31 3.18
2330 3933 5.047021 TGCTACTACTGCAGATTCTTGAACT 60.047 40.000 23.35 0.00 35.31 3.01
2331 3934 5.290643 GCTACTACTGCAGATTCTTGAACTG 59.709 44.000 23.35 0.00 35.14 3.16
2332 3935 4.573900 ACTACTGCAGATTCTTGAACTGG 58.426 43.478 23.35 0.00 33.00 4.00
2337 3940 4.401022 TGCAGATTCTTGAACTGGTCATT 58.599 39.130 0.00 0.00 35.70 2.57
2344 3947 9.965902 AGATTCTTGAACTGGTCATTAAGTATT 57.034 29.630 0.00 0.00 35.70 1.89
2348 3951 8.593679 TCTTGAACTGGTCATTAAGTATTGAGA 58.406 33.333 0.00 0.00 35.70 3.27
2375 3978 9.683069 AAATTCTAGCATTTAACTGTCTTTGTG 57.317 29.630 0.00 0.00 0.00 3.33
2377 3980 7.801716 TCTAGCATTTAACTGTCTTTGTGTT 57.198 32.000 0.00 0.00 0.00 3.32
2378 3981 7.861630 TCTAGCATTTAACTGTCTTTGTGTTC 58.138 34.615 0.00 0.00 0.00 3.18
2379 3982 6.699575 AGCATTTAACTGTCTTTGTGTTCT 57.300 33.333 0.00 0.00 0.00 3.01
2380 3983 6.498304 AGCATTTAACTGTCTTTGTGTTCTG 58.502 36.000 0.00 0.00 0.00 3.02
2381 3984 5.687285 GCATTTAACTGTCTTTGTGTTCTGG 59.313 40.000 0.00 0.00 0.00 3.86
2382 3985 5.828299 TTTAACTGTCTTTGTGTTCTGGG 57.172 39.130 0.00 0.00 0.00 4.45
2383 3986 3.366052 AACTGTCTTTGTGTTCTGGGT 57.634 42.857 0.00 0.00 0.00 4.51
2384 3987 3.366052 ACTGTCTTTGTGTTCTGGGTT 57.634 42.857 0.00 0.00 0.00 4.11
2385 3988 3.697166 ACTGTCTTTGTGTTCTGGGTTT 58.303 40.909 0.00 0.00 0.00 3.27
2387 3990 4.157840 ACTGTCTTTGTGTTCTGGGTTTTC 59.842 41.667 0.00 0.00 0.00 2.29
2388 3991 4.340617 TGTCTTTGTGTTCTGGGTTTTCT 58.659 39.130 0.00 0.00 0.00 2.52
2389 3992 4.770010 TGTCTTTGTGTTCTGGGTTTTCTT 59.230 37.500 0.00 0.00 0.00 2.52
2390 3993 5.105917 TGTCTTTGTGTTCTGGGTTTTCTTC 60.106 40.000 0.00 0.00 0.00 2.87
2391 3994 5.125578 GTCTTTGTGTTCTGGGTTTTCTTCT 59.874 40.000 0.00 0.00 0.00 2.85
2392 3995 4.981806 TTGTGTTCTGGGTTTTCTTCTG 57.018 40.909 0.00 0.00 0.00 3.02
2393 3996 4.229304 TGTGTTCTGGGTTTTCTTCTGA 57.771 40.909 0.00 0.00 0.00 3.27
2394 3997 4.594970 TGTGTTCTGGGTTTTCTTCTGAA 58.405 39.130 0.00 0.00 0.00 3.02
2395 3998 4.640201 TGTGTTCTGGGTTTTCTTCTGAAG 59.360 41.667 11.18 11.18 33.28 3.02
2396 3999 4.881850 GTGTTCTGGGTTTTCTTCTGAAGA 59.118 41.667 15.82 15.82 33.28 2.87
2397 4000 5.357032 GTGTTCTGGGTTTTCTTCTGAAGAA 59.643 40.000 24.84 24.84 45.30 2.52
2413 4016 7.571613 CTTCTGAAGAAACAGCAAGAGATCTTG 60.572 40.741 16.55 16.55 43.31 3.02
2438 4041 2.972713 TCTGGTCAGGCTTAGAACTGTT 59.027 45.455 0.00 0.00 36.17 3.16
2440 4043 4.021368 TCTGGTCAGGCTTAGAACTGTTAC 60.021 45.833 0.00 0.00 36.17 2.50
2448 4051 7.602644 TCAGGCTTAGAACTGTTACATAACTTG 59.397 37.037 3.58 0.05 37.12 3.16
2532 4136 9.507329 AAGATGTACTGCAATAAGAAAAAGAGA 57.493 29.630 0.00 0.00 0.00 3.10
2533 4137 9.507329 AGATGTACTGCAATAAGAAAAAGAGAA 57.493 29.630 0.00 0.00 0.00 2.87
2534 4138 9.548208 GATGTACTGCAATAAGAAAAAGAGAAC 57.452 33.333 0.00 0.00 0.00 3.01
2535 4139 8.677148 TGTACTGCAATAAGAAAAAGAGAACT 57.323 30.769 0.00 0.00 0.00 3.01
2536 4140 9.120538 TGTACTGCAATAAGAAAAAGAGAACTT 57.879 29.630 0.00 0.00 38.05 2.66
2537 4141 9.387123 GTACTGCAATAAGAAAAAGAGAACTTG 57.613 33.333 0.00 0.00 36.39 3.16
2538 4142 8.000780 ACTGCAATAAGAAAAAGAGAACTTGT 57.999 30.769 0.00 0.00 36.39 3.16
2539 4143 8.470002 ACTGCAATAAGAAAAAGAGAACTTGTT 58.530 29.630 0.00 0.00 36.40 2.83
2540 4144 8.633075 TGCAATAAGAAAAAGAGAACTTGTTG 57.367 30.769 0.00 0.00 41.13 3.33
2541 4145 8.250332 TGCAATAAGAAAAAGAGAACTTGTTGT 58.750 29.630 0.64 0.00 40.69 3.32
2542 4146 8.534778 GCAATAAGAAAAAGAGAACTTGTTGTG 58.465 33.333 0.64 0.00 40.69 3.33
2543 4147 9.787532 CAATAAGAAAAAGAGAACTTGTTGTGA 57.212 29.630 0.00 0.00 37.01 3.58
2553 4157 8.908786 AGAGAACTTGTTGTGAATTAGATTCA 57.091 30.769 0.00 0.00 46.30 2.57
2587 4191 8.684386 TTGTGTTGTAAGATAAAATCTGTGGA 57.316 30.769 0.00 0.00 40.13 4.02
2588 4192 8.322906 TGTGTTGTAAGATAAAATCTGTGGAG 57.677 34.615 0.00 0.00 40.13 3.86
2589 4193 7.390440 TGTGTTGTAAGATAAAATCTGTGGAGG 59.610 37.037 0.00 0.00 40.13 4.30
2590 4194 7.606456 GTGTTGTAAGATAAAATCTGTGGAGGA 59.394 37.037 0.00 0.00 40.13 3.71
2591 4195 7.824289 TGTTGTAAGATAAAATCTGTGGAGGAG 59.176 37.037 0.00 0.00 40.13 3.69
2592 4196 7.733773 TGTAAGATAAAATCTGTGGAGGAGA 57.266 36.000 0.00 0.00 40.13 3.71
2593 4197 8.146053 TGTAAGATAAAATCTGTGGAGGAGAA 57.854 34.615 0.00 0.00 40.13 2.87
2594 4198 8.772250 TGTAAGATAAAATCTGTGGAGGAGAAT 58.228 33.333 0.00 0.00 40.13 2.40
2655 4259 7.624360 ATTCAAAACAAAAGAAAGGGGAAAC 57.376 32.000 0.00 0.00 0.00 2.78
2656 4260 5.172205 TCAAAACAAAAGAAAGGGGAAACG 58.828 37.500 0.00 0.00 0.00 3.60
2657 4261 4.811969 AAACAAAAGAAAGGGGAAACGT 57.188 36.364 0.00 0.00 0.00 3.99
2658 4262 3.793797 ACAAAAGAAAGGGGAAACGTG 57.206 42.857 0.00 0.00 0.00 4.49
2659 4263 2.429250 ACAAAAGAAAGGGGAAACGTGG 59.571 45.455 0.00 0.00 0.00 4.94
2660 4264 2.691011 CAAAAGAAAGGGGAAACGTGGA 59.309 45.455 0.00 0.00 0.00 4.02
2661 4265 2.971901 AAGAAAGGGGAAACGTGGAT 57.028 45.000 0.00 0.00 0.00 3.41
2662 4266 2.200373 AGAAAGGGGAAACGTGGATG 57.800 50.000 0.00 0.00 0.00 3.51
2663 4267 1.702957 AGAAAGGGGAAACGTGGATGA 59.297 47.619 0.00 0.00 0.00 2.92
2664 4268 2.107552 AGAAAGGGGAAACGTGGATGAA 59.892 45.455 0.00 0.00 0.00 2.57
2665 4269 2.899303 AAGGGGAAACGTGGATGAAT 57.101 45.000 0.00 0.00 0.00 2.57
2666 4270 4.018779 AGAAAGGGGAAACGTGGATGAATA 60.019 41.667 0.00 0.00 0.00 1.75
2667 4271 3.277142 AGGGGAAACGTGGATGAATAC 57.723 47.619 0.00 0.00 0.00 1.89
2668 4272 2.844348 AGGGGAAACGTGGATGAATACT 59.156 45.455 0.00 0.00 0.00 2.12
2669 4273 3.265995 AGGGGAAACGTGGATGAATACTT 59.734 43.478 0.00 0.00 0.00 2.24
2670 4274 3.377172 GGGGAAACGTGGATGAATACTTG 59.623 47.826 0.00 0.00 0.00 3.16
2671 4275 3.181500 GGGAAACGTGGATGAATACTTGC 60.181 47.826 0.00 0.00 0.00 4.01
2672 4276 3.438781 GGAAACGTGGATGAATACTTGCA 59.561 43.478 0.00 0.00 0.00 4.08
2673 4277 4.437390 GGAAACGTGGATGAATACTTGCAG 60.437 45.833 0.00 0.00 0.00 4.41
2674 4278 3.610040 ACGTGGATGAATACTTGCAGA 57.390 42.857 0.00 0.00 0.00 4.26
2675 4279 3.937814 ACGTGGATGAATACTTGCAGAA 58.062 40.909 0.00 0.00 0.00 3.02
2676 4280 4.517285 ACGTGGATGAATACTTGCAGAAT 58.483 39.130 0.00 0.00 0.00 2.40
2677 4281 4.943705 ACGTGGATGAATACTTGCAGAATT 59.056 37.500 0.00 0.00 0.00 2.17
2678 4282 5.415701 ACGTGGATGAATACTTGCAGAATTT 59.584 36.000 0.00 0.00 0.00 1.82
2679 4283 6.071952 ACGTGGATGAATACTTGCAGAATTTT 60.072 34.615 0.00 0.00 0.00 1.82
2680 4284 6.470235 CGTGGATGAATACTTGCAGAATTTTC 59.530 38.462 0.00 0.00 0.00 2.29
2681 4285 7.542025 GTGGATGAATACTTGCAGAATTTTCT 58.458 34.615 0.00 0.00 38.25 2.52
2682 4286 8.031277 GTGGATGAATACTTGCAGAATTTTCTT 58.969 33.333 0.00 0.00 34.74 2.52
2683 4287 8.587608 TGGATGAATACTTGCAGAATTTTCTTT 58.412 29.630 0.00 0.00 34.74 2.52
2684 4288 8.866956 GGATGAATACTTGCAGAATTTTCTTTG 58.133 33.333 0.00 0.00 34.74 2.77
2685 4289 9.415544 GATGAATACTTGCAGAATTTTCTTTGT 57.584 29.630 0.00 0.00 34.74 2.83
2686 4290 9.768662 ATGAATACTTGCAGAATTTTCTTTGTT 57.231 25.926 0.00 0.00 34.74 2.83
2687 4291 9.598517 TGAATACTTGCAGAATTTTCTTTGTTT 57.401 25.926 0.00 0.00 34.74 2.83
2689 4293 6.908870 ACTTGCAGAATTTTCTTTGTTTCC 57.091 33.333 0.00 0.00 34.74 3.13
2690 4294 6.643388 ACTTGCAGAATTTTCTTTGTTTCCT 58.357 32.000 0.00 0.00 34.74 3.36
2691 4295 6.536224 ACTTGCAGAATTTTCTTTGTTTCCTG 59.464 34.615 0.00 0.00 34.74 3.86
2692 4296 5.976458 TGCAGAATTTTCTTTGTTTCCTGT 58.024 33.333 0.00 0.00 34.74 4.00
2693 4297 6.405538 TGCAGAATTTTCTTTGTTTCCTGTT 58.594 32.000 0.00 0.00 34.74 3.16
2694 4298 6.313411 TGCAGAATTTTCTTTGTTTCCTGTTG 59.687 34.615 0.00 0.00 34.74 3.33
2695 4299 6.708676 CAGAATTTTCTTTGTTTCCTGTTGC 58.291 36.000 0.00 0.00 34.74 4.17
2696 4300 6.536224 CAGAATTTTCTTTGTTTCCTGTTGCT 59.464 34.615 0.00 0.00 34.74 3.91
2697 4301 7.706179 CAGAATTTTCTTTGTTTCCTGTTGCTA 59.294 33.333 0.00 0.00 34.74 3.49
2698 4302 8.424133 AGAATTTTCTTTGTTTCCTGTTGCTAT 58.576 29.630 0.00 0.00 32.55 2.97
2699 4303 8.962884 AATTTTCTTTGTTTCCTGTTGCTATT 57.037 26.923 0.00 0.00 0.00 1.73
2700 4304 8.962884 ATTTTCTTTGTTTCCTGTTGCTATTT 57.037 26.923 0.00 0.00 0.00 1.40
2701 4305 7.769272 TTTCTTTGTTTCCTGTTGCTATTTG 57.231 32.000 0.00 0.00 0.00 2.32
2702 4306 6.463995 TCTTTGTTTCCTGTTGCTATTTGT 57.536 33.333 0.00 0.00 0.00 2.83
2703 4307 6.503524 TCTTTGTTTCCTGTTGCTATTTGTC 58.496 36.000 0.00 0.00 0.00 3.18
2704 4308 4.846779 TGTTTCCTGTTGCTATTTGTCC 57.153 40.909 0.00 0.00 0.00 4.02
2705 4309 3.572255 TGTTTCCTGTTGCTATTTGTCCC 59.428 43.478 0.00 0.00 0.00 4.46
2706 4310 3.806949 TTCCTGTTGCTATTTGTCCCT 57.193 42.857 0.00 0.00 0.00 4.20
2707 4311 4.919774 TTCCTGTTGCTATTTGTCCCTA 57.080 40.909 0.00 0.00 0.00 3.53
2708 4312 5.450818 TTCCTGTTGCTATTTGTCCCTAT 57.549 39.130 0.00 0.00 0.00 2.57
2709 4313 4.780815 TCCTGTTGCTATTTGTCCCTATG 58.219 43.478 0.00 0.00 0.00 2.23
2710 4314 4.473196 TCCTGTTGCTATTTGTCCCTATGA 59.527 41.667 0.00 0.00 0.00 2.15
2711 4315 5.132648 TCCTGTTGCTATTTGTCCCTATGAT 59.867 40.000 0.00 0.00 0.00 2.45
2712 4316 6.328934 TCCTGTTGCTATTTGTCCCTATGATA 59.671 38.462 0.00 0.00 0.00 2.15
2713 4317 7.017551 TCCTGTTGCTATTTGTCCCTATGATAT 59.982 37.037 0.00 0.00 0.00 1.63
2714 4318 7.335422 CCTGTTGCTATTTGTCCCTATGATATC 59.665 40.741 0.00 0.00 0.00 1.63
2715 4319 6.873605 TGTTGCTATTTGTCCCTATGATATCG 59.126 38.462 0.00 0.00 0.00 2.92
2716 4320 6.850752 TGCTATTTGTCCCTATGATATCGA 57.149 37.500 0.00 0.00 0.00 3.59
2717 4321 7.239763 TGCTATTTGTCCCTATGATATCGAA 57.760 36.000 0.00 0.00 0.00 3.71
2718 4322 7.676004 TGCTATTTGTCCCTATGATATCGAAA 58.324 34.615 0.00 0.00 0.00 3.46
2719 4323 7.819415 TGCTATTTGTCCCTATGATATCGAAAG 59.181 37.037 0.00 0.00 0.00 2.62
2720 4324 7.819900 GCTATTTGTCCCTATGATATCGAAAGT 59.180 37.037 0.00 0.00 0.00 2.66
2723 4327 6.585695 TGTCCCTATGATATCGAAAGTACC 57.414 41.667 0.00 0.00 0.00 3.34
2724 4328 6.312529 TGTCCCTATGATATCGAAAGTACCT 58.687 40.000 0.00 0.00 0.00 3.08
2725 4329 6.781014 TGTCCCTATGATATCGAAAGTACCTT 59.219 38.462 0.00 0.00 0.00 3.50
2726 4330 7.289317 TGTCCCTATGATATCGAAAGTACCTTT 59.711 37.037 0.00 0.00 36.29 3.11
2727 4331 7.599245 GTCCCTATGATATCGAAAGTACCTTTG 59.401 40.741 0.00 0.00 33.49 2.77
2728 4332 7.289317 TCCCTATGATATCGAAAGTACCTTTGT 59.711 37.037 0.00 0.00 33.49 2.83
2729 4333 8.582437 CCCTATGATATCGAAAGTACCTTTGTA 58.418 37.037 0.00 0.00 33.49 2.41
2730 4334 9.408069 CCTATGATATCGAAAGTACCTTTGTAC 57.592 37.037 0.00 0.00 46.36 2.90
2737 4341 3.538379 GTACCTTTGTACACCCGGG 57.462 57.895 22.25 22.25 45.50 5.73
2738 4342 0.674581 GTACCTTTGTACACCCGGGC 60.675 60.000 24.08 4.22 45.50 6.13
2739 4343 0.837260 TACCTTTGTACACCCGGGCT 60.837 55.000 24.08 8.77 0.00 5.19
2740 4344 1.376812 CCTTTGTACACCCGGGCTC 60.377 63.158 24.08 9.22 0.00 4.70
2741 4345 1.373435 CTTTGTACACCCGGGCTCA 59.627 57.895 24.08 12.02 0.00 4.26
2742 4346 0.250553 CTTTGTACACCCGGGCTCAA 60.251 55.000 24.08 17.46 0.00 3.02
2743 4347 0.183014 TTTGTACACCCGGGCTCAAA 59.817 50.000 24.08 22.00 0.00 2.69
2744 4348 0.402504 TTGTACACCCGGGCTCAAAT 59.597 50.000 24.08 0.00 0.00 2.32
2745 4349 0.322098 TGTACACCCGGGCTCAAATG 60.322 55.000 24.08 13.29 0.00 2.32
2746 4350 1.377987 TACACCCGGGCTCAAATGC 60.378 57.895 24.08 0.00 0.00 3.56
2747 4351 1.847798 TACACCCGGGCTCAAATGCT 61.848 55.000 24.08 3.75 0.00 3.79
2748 4352 2.044946 ACCCGGGCTCAAATGCTC 60.045 61.111 24.08 0.00 0.00 4.26
2749 4353 2.273449 CCCGGGCTCAAATGCTCT 59.727 61.111 8.08 0.00 0.00 4.09
2750 4354 1.379044 CCCGGGCTCAAATGCTCTT 60.379 57.895 8.08 0.00 0.00 2.85
2751 4355 1.660560 CCCGGGCTCAAATGCTCTTG 61.661 60.000 8.08 0.00 0.00 3.02
2752 4356 0.962356 CCGGGCTCAAATGCTCTTGT 60.962 55.000 0.00 0.00 0.00 3.16
2753 4357 0.883833 CGGGCTCAAATGCTCTTGTT 59.116 50.000 0.00 0.00 0.00 2.83
2754 4358 1.401931 CGGGCTCAAATGCTCTTGTTG 60.402 52.381 0.00 0.00 0.00 3.33
2755 4359 1.615392 GGGCTCAAATGCTCTTGTTGT 59.385 47.619 0.00 0.00 0.00 3.32
2756 4360 2.608752 GGGCTCAAATGCTCTTGTTGTG 60.609 50.000 0.00 0.00 0.00 3.33
2757 4361 2.294233 GGCTCAAATGCTCTTGTTGTGA 59.706 45.455 0.00 0.00 0.00 3.58
2758 4362 3.243501 GGCTCAAATGCTCTTGTTGTGAA 60.244 43.478 0.00 0.00 0.00 3.18
2759 4363 3.732721 GCTCAAATGCTCTTGTTGTGAAC 59.267 43.478 0.00 0.00 0.00 3.18
2760 4364 4.734402 GCTCAAATGCTCTTGTTGTGAACA 60.734 41.667 0.00 0.00 40.21 3.18
2761 4365 4.923893 TCAAATGCTCTTGTTGTGAACAG 58.076 39.130 0.00 0.00 43.27 3.16
2762 4366 4.398988 TCAAATGCTCTTGTTGTGAACAGT 59.601 37.500 0.00 0.00 43.27 3.55
2763 4367 3.976793 ATGCTCTTGTTGTGAACAGTG 57.023 42.857 0.00 0.00 43.27 3.66
2764 4368 2.984562 TGCTCTTGTTGTGAACAGTGA 58.015 42.857 0.00 0.00 43.27 3.41
2765 4369 3.342719 TGCTCTTGTTGTGAACAGTGAA 58.657 40.909 0.00 0.00 43.27 3.18
2766 4370 3.755905 TGCTCTTGTTGTGAACAGTGAAA 59.244 39.130 0.00 0.00 43.27 2.69
2767 4371 4.398988 TGCTCTTGTTGTGAACAGTGAAAT 59.601 37.500 0.00 0.00 43.27 2.17
2768 4372 4.736793 GCTCTTGTTGTGAACAGTGAAATG 59.263 41.667 0.00 0.00 43.27 2.32
2769 4373 5.449041 GCTCTTGTTGTGAACAGTGAAATGA 60.449 40.000 0.00 0.00 43.27 2.57
2770 4374 6.507958 TCTTGTTGTGAACAGTGAAATGAA 57.492 33.333 0.00 0.00 43.27 2.57
2771 4375 6.918626 TCTTGTTGTGAACAGTGAAATGAAA 58.081 32.000 0.00 0.00 43.27 2.69
2772 4376 7.028962 TCTTGTTGTGAACAGTGAAATGAAAG 58.971 34.615 0.00 0.00 43.27 2.62
2773 4377 6.507958 TGTTGTGAACAGTGAAATGAAAGA 57.492 33.333 0.00 0.00 36.25 2.52
2774 4378 6.918626 TGTTGTGAACAGTGAAATGAAAGAA 58.081 32.000 0.00 0.00 36.25 2.52
2775 4379 7.546358 TGTTGTGAACAGTGAAATGAAAGAAT 58.454 30.769 0.00 0.00 36.25 2.40
2776 4380 8.681806 TGTTGTGAACAGTGAAATGAAAGAATA 58.318 29.630 0.00 0.00 36.25 1.75
2777 4381 9.173939 GTTGTGAACAGTGAAATGAAAGAATAG 57.826 33.333 0.00 0.00 0.00 1.73
2778 4382 7.874940 TGTGAACAGTGAAATGAAAGAATAGG 58.125 34.615 0.00 0.00 0.00 2.57
2779 4383 7.719193 TGTGAACAGTGAAATGAAAGAATAGGA 59.281 33.333 0.00 0.00 0.00 2.94
2780 4384 8.567948 GTGAACAGTGAAATGAAAGAATAGGAA 58.432 33.333 0.00 0.00 0.00 3.36
2781 4385 9.130661 TGAACAGTGAAATGAAAGAATAGGAAA 57.869 29.630 0.00 0.00 0.00 3.13
2782 4386 9.965824 GAACAGTGAAATGAAAGAATAGGAAAA 57.034 29.630 0.00 0.00 0.00 2.29
2836 4440 8.301730 ACTTCAAGAAATATGTTTTGTGCATG 57.698 30.769 0.00 0.00 0.00 4.06
2837 4441 6.709145 TCAAGAAATATGTTTTGTGCATGC 57.291 33.333 11.82 11.82 0.00 4.06
2838 4442 6.221659 TCAAGAAATATGTTTTGTGCATGCA 58.778 32.000 18.46 18.46 0.00 3.96
2839 4443 6.704937 TCAAGAAATATGTTTTGTGCATGCAA 59.295 30.769 24.58 10.26 0.00 4.08
2840 4444 7.226128 TCAAGAAATATGTTTTGTGCATGCAAA 59.774 29.630 24.58 15.92 36.67 3.68
2841 4445 7.493743 AGAAATATGTTTTGTGCATGCAAAA 57.506 28.000 24.58 21.90 43.46 2.44
2842 4446 8.101654 AGAAATATGTTTTGTGCATGCAAAAT 57.898 26.923 23.65 11.54 46.00 1.82
2843 4447 8.569641 AGAAATATGTTTTGTGCATGCAAAATT 58.430 25.926 23.65 12.97 46.00 1.82
2844 4448 9.182933 GAAATATGTTTTGTGCATGCAAAATTT 57.817 25.926 23.65 18.44 46.00 1.82
2845 4449 9.530633 AAATATGTTTTGTGCATGCAAAATTTT 57.469 22.222 23.65 14.69 46.00 1.82
2848 4452 8.730970 ATGTTTTGTGCATGCAAAATTTTATC 57.269 26.923 23.65 8.11 46.00 1.75
2849 4453 7.700505 TGTTTTGTGCATGCAAAATTTTATCA 58.299 26.923 23.65 10.73 46.00 2.15
2850 4454 8.350722 TGTTTTGTGCATGCAAAATTTTATCAT 58.649 25.926 23.65 7.45 46.00 2.45
2851 4455 8.631695 GTTTTGTGCATGCAAAATTTTATCATG 58.368 29.630 23.65 25.63 46.00 3.07
2852 4456 7.668525 TTGTGCATGCAAAATTTTATCATGA 57.331 28.000 29.94 19.78 34.78 3.07
2853 4457 7.668525 TGTGCATGCAAAATTTTATCATGAA 57.331 28.000 29.94 23.63 34.78 2.57
2854 4458 8.095937 TGTGCATGCAAAATTTTATCATGAAA 57.904 26.923 29.94 20.98 34.78 2.69
2855 4459 8.731605 TGTGCATGCAAAATTTTATCATGAAAT 58.268 25.926 29.94 8.56 34.78 2.17
2856 4460 9.217223 GTGCATGCAAAATTTTATCATGAAATC 57.783 29.630 29.94 20.00 34.78 2.17
2857 4461 8.947115 TGCATGCAAAATTTTATCATGAAATCA 58.053 25.926 29.94 21.39 34.78 2.57
2858 4462 9.217223 GCATGCAAAATTTTATCATGAAATCAC 57.783 29.630 29.94 17.34 34.78 3.06
2877 4481 3.469008 ACATTGGTGAGAGTCGTGAAA 57.531 42.857 0.00 0.00 0.00 2.69
2878 4482 3.804036 ACATTGGTGAGAGTCGTGAAAA 58.196 40.909 0.00 0.00 0.00 2.29
2879 4483 4.196193 ACATTGGTGAGAGTCGTGAAAAA 58.804 39.130 0.00 0.00 0.00 1.94
2903 4507 5.796424 AAAATCAGAGCTCCAAAATGTGT 57.204 34.783 10.93 0.00 0.00 3.72
2904 4508 5.382618 AAATCAGAGCTCCAAAATGTGTC 57.617 39.130 10.93 0.00 0.00 3.67
2905 4509 3.777106 TCAGAGCTCCAAAATGTGTCT 57.223 42.857 10.93 0.00 0.00 3.41
2906 4510 3.405831 TCAGAGCTCCAAAATGTGTCTG 58.594 45.455 10.93 0.00 32.85 3.51
2907 4511 3.071457 TCAGAGCTCCAAAATGTGTCTGA 59.929 43.478 10.93 0.00 37.27 3.27
2908 4512 3.817084 CAGAGCTCCAAAATGTGTCTGAA 59.183 43.478 10.93 0.00 33.28 3.02
2909 4513 4.276678 CAGAGCTCCAAAATGTGTCTGAAA 59.723 41.667 10.93 0.00 33.28 2.69
2910 4514 4.889409 AGAGCTCCAAAATGTGTCTGAAAA 59.111 37.500 10.93 0.00 0.00 2.29
2911 4515 5.537674 AGAGCTCCAAAATGTGTCTGAAAAT 59.462 36.000 10.93 0.00 0.00 1.82
2912 4516 6.716628 AGAGCTCCAAAATGTGTCTGAAAATA 59.283 34.615 10.93 0.00 0.00 1.40
2913 4517 7.231317 AGAGCTCCAAAATGTGTCTGAAAATAA 59.769 33.333 10.93 0.00 0.00 1.40
2914 4518 7.147976 AGCTCCAAAATGTGTCTGAAAATAAC 58.852 34.615 0.00 0.00 0.00 1.89
2915 4519 6.922957 GCTCCAAAATGTGTCTGAAAATAACA 59.077 34.615 0.00 0.00 0.00 2.41
2916 4520 7.599998 GCTCCAAAATGTGTCTGAAAATAACAT 59.400 33.333 0.00 0.00 32.99 2.71
2917 4521 9.480053 CTCCAAAATGTGTCTGAAAATAACATT 57.520 29.630 0.00 0.00 41.85 2.71
2923 4527 7.928908 TGTGTCTGAAAATAACATTTTGAGC 57.071 32.000 6.11 3.53 0.00 4.26
2924 4528 7.487484 TGTGTCTGAAAATAACATTTTGAGCA 58.513 30.769 6.11 5.45 0.00 4.26
2925 4529 7.978414 TGTGTCTGAAAATAACATTTTGAGCAA 59.022 29.630 6.11 0.00 0.00 3.91
2926 4530 8.268738 GTGTCTGAAAATAACATTTTGAGCAAC 58.731 33.333 6.11 4.12 0.00 4.17
2927 4531 7.978414 TGTCTGAAAATAACATTTTGAGCAACA 59.022 29.630 6.11 4.49 0.00 3.33
2928 4532 8.981647 GTCTGAAAATAACATTTTGAGCAACAT 58.018 29.630 6.11 0.00 0.00 2.71
2929 4533 9.545105 TCTGAAAATAACATTTTGAGCAACATT 57.455 25.926 6.11 0.00 0.00 2.71
2938 4542 9.473640 AACATTTTGAGCAACATTTTTGTTTTT 57.526 22.222 0.00 0.00 0.00 1.94
2953 4557 3.187211 TTTTTCGCCACGCCATTTC 57.813 47.368 0.00 0.00 0.00 2.17
2954 4558 0.661780 TTTTTCGCCACGCCATTTCG 60.662 50.000 0.00 0.00 0.00 3.46
2955 4559 1.787057 TTTTCGCCACGCCATTTCGT 61.787 50.000 0.00 0.00 44.35 3.85
2984 4588 5.606348 TTTTTGCATACACTCCAAACCTT 57.394 34.783 0.00 0.00 0.00 3.50
2985 4589 6.716934 TTTTTGCATACACTCCAAACCTTA 57.283 33.333 0.00 0.00 0.00 2.69
2986 4590 6.716934 TTTTGCATACACTCCAAACCTTAA 57.283 33.333 0.00 0.00 0.00 1.85
2987 4591 6.716934 TTTGCATACACTCCAAACCTTAAA 57.283 33.333 0.00 0.00 0.00 1.52
2988 4592 6.909550 TTGCATACACTCCAAACCTTAAAT 57.090 33.333 0.00 0.00 0.00 1.40
2989 4593 6.909550 TGCATACACTCCAAACCTTAAATT 57.090 33.333 0.00 0.00 0.00 1.82
2990 4594 7.296628 TGCATACACTCCAAACCTTAAATTT 57.703 32.000 0.00 0.00 0.00 1.82
2991 4595 7.731054 TGCATACACTCCAAACCTTAAATTTT 58.269 30.769 0.00 0.00 0.00 1.82
2992 4596 7.655328 TGCATACACTCCAAACCTTAAATTTTG 59.345 33.333 0.00 2.68 33.30 2.44
2999 4603 5.799542 CAAACCTTAAATTTTGGACGTCG 57.200 39.130 9.92 0.00 0.00 5.12
3000 4604 5.512473 CAAACCTTAAATTTTGGACGTCGA 58.488 37.500 9.92 1.86 0.00 4.20
3001 4605 5.952526 AACCTTAAATTTTGGACGTCGAT 57.047 34.783 9.92 0.00 0.00 3.59
3002 4606 7.299586 CAAACCTTAAATTTTGGACGTCGATA 58.700 34.615 9.92 0.00 0.00 2.92
3003 4607 7.437793 AACCTTAAATTTTGGACGTCGATAA 57.562 32.000 9.92 7.71 0.00 1.75
3004 4608 6.834876 ACCTTAAATTTTGGACGTCGATAAC 58.165 36.000 9.92 0.00 0.00 1.89
3005 4609 6.652062 ACCTTAAATTTTGGACGTCGATAACT 59.348 34.615 9.92 0.00 0.00 2.24
3006 4610 6.959311 CCTTAAATTTTGGACGTCGATAACTG 59.041 38.462 9.92 0.00 0.00 3.16
3007 4611 4.336532 AATTTTGGACGTCGATAACTGC 57.663 40.909 9.92 0.00 0.00 4.40
3008 4612 1.717194 TTTGGACGTCGATAACTGCC 58.283 50.000 9.92 0.00 0.00 4.85
3009 4613 0.604073 TTGGACGTCGATAACTGCCA 59.396 50.000 9.92 0.00 0.00 4.92
3010 4614 0.108992 TGGACGTCGATAACTGCCAC 60.109 55.000 9.92 0.00 0.00 5.01
3011 4615 0.108992 GGACGTCGATAACTGCCACA 60.109 55.000 9.92 0.00 0.00 4.17
3012 4616 0.989890 GACGTCGATAACTGCCACAC 59.010 55.000 0.00 0.00 0.00 3.82
3013 4617 0.731514 ACGTCGATAACTGCCACACG 60.732 55.000 0.00 0.00 0.00 4.49
3014 4618 0.731514 CGTCGATAACTGCCACACGT 60.732 55.000 0.00 0.00 0.00 4.49
3015 4619 0.713883 GTCGATAACTGCCACACGTG 59.286 55.000 15.48 15.48 0.00 4.49
3016 4620 0.315886 TCGATAACTGCCACACGTGT 59.684 50.000 17.22 17.22 0.00 4.49
3017 4621 0.438445 CGATAACTGCCACACGTGTG 59.562 55.000 36.13 36.13 45.23 3.82
3026 4630 3.532138 CACACGTGTGGCAGAAAAG 57.468 52.632 35.65 11.35 42.10 2.27
3027 4631 1.013596 CACACGTGTGGCAGAAAAGA 58.986 50.000 35.65 0.00 42.10 2.52
3028 4632 1.400142 CACACGTGTGGCAGAAAAGAA 59.600 47.619 35.65 0.00 42.10 2.52
3029 4633 1.670811 ACACGTGTGGCAGAAAAGAAG 59.329 47.619 22.71 0.00 34.19 2.85
3030 4634 1.939934 CACGTGTGGCAGAAAAGAAGA 59.060 47.619 7.58 0.00 0.00 2.87
3031 4635 2.549754 CACGTGTGGCAGAAAAGAAGAT 59.450 45.455 7.58 0.00 0.00 2.40
3032 4636 2.549754 ACGTGTGGCAGAAAAGAAGATG 59.450 45.455 0.00 0.00 0.00 2.90
3033 4637 2.666619 CGTGTGGCAGAAAAGAAGATGC 60.667 50.000 0.00 0.00 37.95 3.91
3034 4638 2.294233 GTGTGGCAGAAAAGAAGATGCA 59.706 45.455 0.00 0.00 40.46 3.96
3035 4639 2.294233 TGTGGCAGAAAAGAAGATGCAC 59.706 45.455 0.00 0.00 40.46 4.57
3036 4640 1.888512 TGGCAGAAAAGAAGATGCACC 59.111 47.619 0.00 0.00 40.46 5.01
3037 4641 1.888512 GGCAGAAAAGAAGATGCACCA 59.111 47.619 0.00 0.00 40.46 4.17
3038 4642 2.352127 GGCAGAAAAGAAGATGCACCAC 60.352 50.000 0.00 0.00 40.46 4.16
3039 4643 2.294233 GCAGAAAAGAAGATGCACCACA 59.706 45.455 0.00 0.00 38.54 4.17
3040 4644 3.854784 GCAGAAAAGAAGATGCACCACAC 60.855 47.826 0.00 0.00 38.54 3.82
3041 4645 2.549754 AGAAAAGAAGATGCACCACACG 59.450 45.455 0.00 0.00 0.00 4.49
3042 4646 1.967319 AAAGAAGATGCACCACACGT 58.033 45.000 0.00 0.00 0.00 4.49
3043 4647 1.512926 AAGAAGATGCACCACACGTC 58.487 50.000 0.00 0.00 0.00 4.34
3044 4648 0.681733 AGAAGATGCACCACACGTCT 59.318 50.000 0.00 0.00 34.86 4.18
3045 4649 1.071605 GAAGATGCACCACACGTCTC 58.928 55.000 0.00 0.00 32.19 3.36
3046 4650 0.681733 AAGATGCACCACACGTCTCT 59.318 50.000 0.00 0.00 32.19 3.10
3047 4651 1.545841 AGATGCACCACACGTCTCTA 58.454 50.000 0.00 0.00 0.00 2.43
3048 4652 1.893137 AGATGCACCACACGTCTCTAA 59.107 47.619 0.00 0.00 0.00 2.10
3049 4653 2.497675 AGATGCACCACACGTCTCTAAT 59.502 45.455 0.00 0.00 0.00 1.73
3050 4654 2.078849 TGCACCACACGTCTCTAATG 57.921 50.000 0.00 0.00 0.00 1.90
3051 4655 0.721718 GCACCACACGTCTCTAATGC 59.278 55.000 0.00 0.00 0.00 3.56
3052 4656 1.939381 GCACCACACGTCTCTAATGCA 60.939 52.381 0.00 0.00 0.00 3.96
3053 4657 2.412870 CACCACACGTCTCTAATGCAA 58.587 47.619 0.00 0.00 0.00 4.08
3054 4658 2.805671 CACCACACGTCTCTAATGCAAA 59.194 45.455 0.00 0.00 0.00 3.68
3055 4659 3.436704 CACCACACGTCTCTAATGCAAAT 59.563 43.478 0.00 0.00 0.00 2.32
3056 4660 4.629634 CACCACACGTCTCTAATGCAAATA 59.370 41.667 0.00 0.00 0.00 1.40
3057 4661 4.870426 ACCACACGTCTCTAATGCAAATAG 59.130 41.667 0.00 0.00 0.00 1.73
3058 4662 5.109210 CCACACGTCTCTAATGCAAATAGA 58.891 41.667 10.98 10.98 0.00 1.98
3059 4663 5.755375 CCACACGTCTCTAATGCAAATAGAT 59.245 40.000 11.67 0.00 0.00 1.98
3060 4664 6.258727 CCACACGTCTCTAATGCAAATAGATT 59.741 38.462 11.67 0.00 0.00 2.40
3061 4665 7.121911 CACACGTCTCTAATGCAAATAGATTG 58.878 38.462 11.67 9.59 42.21 2.67
3072 4676 3.865329 CAAATAGATTGCCACGTCATCG 58.135 45.455 0.00 0.00 36.24 3.84
3073 4677 1.502231 ATAGATTGCCACGTCATCGC 58.498 50.000 0.00 0.00 41.18 4.58
3074 4678 0.174617 TAGATTGCCACGTCATCGCA 59.825 50.000 0.00 0.00 41.18 5.10
3075 4679 0.462581 AGATTGCCACGTCATCGCAT 60.463 50.000 0.00 0.00 41.18 4.73
3076 4680 0.316442 GATTGCCACGTCATCGCATG 60.316 55.000 0.00 0.00 41.18 4.06
3077 4681 2.327002 ATTGCCACGTCATCGCATGC 62.327 55.000 7.91 7.91 41.18 4.06
3078 4682 3.498834 GCCACGTCATCGCATGCA 61.499 61.111 19.57 5.34 41.18 3.96
3079 4683 2.827051 GCCACGTCATCGCATGCAT 61.827 57.895 19.57 7.64 41.18 3.96
3080 4684 1.010462 CCACGTCATCGCATGCATG 60.010 57.895 22.70 22.70 41.18 4.06
3081 4685 1.430707 CCACGTCATCGCATGCATGA 61.431 55.000 30.64 20.70 41.18 3.07
3082 4686 0.374410 CACGTCATCGCATGCATGAA 59.626 50.000 30.64 17.10 41.18 2.57
3083 4687 1.003223 CACGTCATCGCATGCATGAAT 60.003 47.619 30.64 18.58 41.18 2.57
3084 4688 1.003223 ACGTCATCGCATGCATGAATG 60.003 47.619 30.64 27.38 41.18 2.67
3098 4702 3.722780 GCATGAATGCGAGAATCTTTTCG 59.277 43.478 0.00 0.00 44.67 3.46
3099 4703 4.494690 GCATGAATGCGAGAATCTTTTCGA 60.495 41.667 7.01 0.00 44.67 3.71
3100 4704 5.562917 CATGAATGCGAGAATCTTTTCGAA 58.437 37.500 7.01 0.00 39.06 3.71
3101 4705 5.801350 TGAATGCGAGAATCTTTTCGAAT 57.199 34.783 0.00 0.00 36.66 3.34
3102 4706 6.182039 TGAATGCGAGAATCTTTTCGAATT 57.818 33.333 8.38 8.38 45.27 2.17
3103 4707 6.611381 TGAATGCGAGAATCTTTTCGAATTT 58.389 32.000 9.63 0.00 43.27 1.82
3104 4708 7.083858 TGAATGCGAGAATCTTTTCGAATTTT 58.916 30.769 9.63 0.00 43.27 1.82
3105 4709 7.271223 TGAATGCGAGAATCTTTTCGAATTTTC 59.729 33.333 9.63 0.50 43.27 2.29
3106 4710 5.996219 TGCGAGAATCTTTTCGAATTTTCA 58.004 33.333 0.00 0.00 39.06 2.69
3107 4711 6.079763 TGCGAGAATCTTTTCGAATTTTCAG 58.920 36.000 0.00 1.08 39.06 3.02
3108 4712 6.080406 GCGAGAATCTTTTCGAATTTTCAGT 58.920 36.000 0.00 0.00 39.06 3.41
3109 4713 6.578919 GCGAGAATCTTTTCGAATTTTCAGTT 59.421 34.615 0.00 0.00 39.06 3.16
3110 4714 7.113544 GCGAGAATCTTTTCGAATTTTCAGTTT 59.886 33.333 0.00 0.00 39.06 2.66
3111 4715 8.958043 CGAGAATCTTTTCGAATTTTCAGTTTT 58.042 29.630 0.00 0.00 39.06 2.43
3150 4754 9.846248 ACTCTTAAATGAAAAATCCGATTGAAG 57.154 29.630 0.00 0.00 0.00 3.02
3154 4758 9.801873 TTAAATGAAAAATCCGATTGAAGATCC 57.198 29.630 0.00 0.00 0.00 3.36
3155 4759 5.484173 TGAAAAATCCGATTGAAGATCCG 57.516 39.130 0.00 0.00 0.00 4.18
3156 4760 4.941263 TGAAAAATCCGATTGAAGATCCGT 59.059 37.500 0.00 0.00 0.00 4.69
3157 4761 5.414454 TGAAAAATCCGATTGAAGATCCGTT 59.586 36.000 0.00 0.00 0.00 4.44
3158 4762 5.897377 AAAATCCGATTGAAGATCCGTTT 57.103 34.783 0.00 0.00 0.00 3.60
3159 4763 5.897377 AAATCCGATTGAAGATCCGTTTT 57.103 34.783 0.00 0.00 0.00 2.43
3160 4764 5.485662 AATCCGATTGAAGATCCGTTTTC 57.514 39.130 0.00 0.00 0.00 2.29
3161 4765 3.932822 TCCGATTGAAGATCCGTTTTCA 58.067 40.909 0.00 0.00 0.00 2.69
3162 4766 3.682858 TCCGATTGAAGATCCGTTTTCAC 59.317 43.478 0.00 0.00 33.36 3.18
3163 4767 3.181510 CCGATTGAAGATCCGTTTTCACC 60.182 47.826 0.00 0.00 33.36 4.02
3164 4768 3.435327 CGATTGAAGATCCGTTTTCACCA 59.565 43.478 0.00 0.00 33.36 4.17
3165 4769 4.094887 CGATTGAAGATCCGTTTTCACCAT 59.905 41.667 0.00 0.00 33.36 3.55
3166 4770 5.391950 CGATTGAAGATCCGTTTTCACCATT 60.392 40.000 0.00 0.00 33.36 3.16
3167 4771 6.183360 CGATTGAAGATCCGTTTTCACCATTA 60.183 38.462 0.00 0.00 33.36 1.90
3168 4772 6.885952 TTGAAGATCCGTTTTCACCATTAA 57.114 33.333 0.00 0.00 33.36 1.40
3169 4773 6.885952 TGAAGATCCGTTTTCACCATTAAA 57.114 33.333 0.00 0.00 0.00 1.52
3170 4774 7.461182 TGAAGATCCGTTTTCACCATTAAAT 57.539 32.000 0.00 0.00 0.00 1.40
3171 4775 7.535139 TGAAGATCCGTTTTCACCATTAAATC 58.465 34.615 0.00 0.00 0.00 2.17
3172 4776 7.393234 TGAAGATCCGTTTTCACCATTAAATCT 59.607 33.333 0.00 0.00 0.00 2.40
3173 4777 7.321745 AGATCCGTTTTCACCATTAAATCTC 57.678 36.000 0.00 0.00 0.00 2.75
3174 4778 7.112779 AGATCCGTTTTCACCATTAAATCTCT 58.887 34.615 0.00 0.00 0.00 3.10
3175 4779 6.737254 TCCGTTTTCACCATTAAATCTCTC 57.263 37.500 0.00 0.00 0.00 3.20
3176 4780 5.350365 TCCGTTTTCACCATTAAATCTCTCG 59.650 40.000 0.00 0.00 0.00 4.04
3177 4781 5.022021 CGTTTTCACCATTAAATCTCTCGC 58.978 41.667 0.00 0.00 0.00 5.03
3178 4782 4.857871 TTTCACCATTAAATCTCTCGCG 57.142 40.909 0.00 0.00 0.00 5.87
3179 4783 3.793797 TCACCATTAAATCTCTCGCGA 57.206 42.857 9.26 9.26 0.00 5.87
3180 4784 4.322080 TCACCATTAAATCTCTCGCGAT 57.678 40.909 10.36 0.00 0.00 4.58
3181 4785 4.051237 TCACCATTAAATCTCTCGCGATG 58.949 43.478 10.36 6.04 0.00 3.84
3182 4786 4.051237 CACCATTAAATCTCTCGCGATGA 58.949 43.478 10.36 12.06 0.00 2.92
3183 4787 4.149571 CACCATTAAATCTCTCGCGATGAG 59.850 45.833 21.94 21.94 46.72 2.90
3195 4799 3.849911 TCGCGATGAGATCTTTGAAACT 58.150 40.909 3.71 0.00 0.00 2.66
3196 4800 4.993905 TCGCGATGAGATCTTTGAAACTA 58.006 39.130 3.71 0.00 0.00 2.24
3197 4801 5.037385 TCGCGATGAGATCTTTGAAACTAG 58.963 41.667 3.71 0.00 0.00 2.57
3198 4802 5.037385 CGCGATGAGATCTTTGAAACTAGA 58.963 41.667 0.00 0.00 0.00 2.43
3199 4803 5.689514 CGCGATGAGATCTTTGAAACTAGAT 59.310 40.000 0.00 0.00 33.92 1.98
3200 4804 6.129221 CGCGATGAGATCTTTGAAACTAGATC 60.129 42.308 0.00 0.00 44.54 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
983 1039 9.890629 AGATCTGCATCTGTAAATACAAAGTAA 57.109 29.630 0.00 0.00 38.03 2.24
1058 1488 3.019933 TGACATTGTCGATCGTGTCAA 57.980 42.857 27.20 22.79 45.50 3.18
1159 1589 1.414866 TTGTAGTCAGCCAGGGTGCA 61.415 55.000 14.37 3.11 0.00 4.57
1683 2537 0.895530 TCAATGGTGTCCGAGGACTC 59.104 55.000 21.35 17.63 44.80 3.36
1684 2538 0.608640 GTCAATGGTGTCCGAGGACT 59.391 55.000 21.35 0.10 44.80 3.85
1685 2539 0.320374 TGTCAATGGTGTCCGAGGAC 59.680 55.000 14.98 14.98 44.77 3.85
1686 2540 1.052617 TTGTCAATGGTGTCCGAGGA 58.947 50.000 0.00 0.00 0.00 3.71
1687 2541 1.739466 CATTGTCAATGGTGTCCGAGG 59.261 52.381 16.53 0.00 35.23 4.63
1688 2542 2.160219 CACATTGTCAATGGTGTCCGAG 59.840 50.000 25.59 2.01 43.21 4.63
1689 2543 2.150390 CACATTGTCAATGGTGTCCGA 58.850 47.619 25.59 0.00 43.21 4.55
1690 2544 2.150390 TCACATTGTCAATGGTGTCCG 58.850 47.619 25.59 9.70 43.21 4.79
1691 2545 3.057315 CCTTCACATTGTCAATGGTGTCC 60.057 47.826 25.59 0.00 43.21 4.02
1692 2546 3.612479 GCCTTCACATTGTCAATGGTGTC 60.612 47.826 25.59 9.00 43.21 3.67
1693 2547 2.297033 GCCTTCACATTGTCAATGGTGT 59.703 45.455 25.59 7.41 43.21 4.16
1694 2548 2.296752 TGCCTTCACATTGTCAATGGTG 59.703 45.455 25.59 20.21 43.21 4.17
1695 2549 2.596346 TGCCTTCACATTGTCAATGGT 58.404 42.857 25.59 11.41 43.21 3.55
1696 2550 3.663995 TTGCCTTCACATTGTCAATGG 57.336 42.857 25.59 16.02 43.21 3.16
1697 2551 4.873817 TCTTTGCCTTCACATTGTCAATG 58.126 39.130 21.55 21.55 44.48 2.82
1698 2552 5.337009 GGATCTTTGCCTTCACATTGTCAAT 60.337 40.000 0.00 0.00 0.00 2.57
1699 2553 4.022068 GGATCTTTGCCTTCACATTGTCAA 60.022 41.667 0.00 0.00 0.00 3.18
1700 2554 3.507233 GGATCTTTGCCTTCACATTGTCA 59.493 43.478 0.00 0.00 0.00 3.58
1701 2555 3.507233 TGGATCTTTGCCTTCACATTGTC 59.493 43.478 0.00 0.00 0.00 3.18
1702 2556 3.256631 GTGGATCTTTGCCTTCACATTGT 59.743 43.478 0.00 0.00 0.00 2.71
1703 2557 3.671433 CGTGGATCTTTGCCTTCACATTG 60.671 47.826 0.00 0.00 0.00 2.82
1704 2558 2.489329 CGTGGATCTTTGCCTTCACATT 59.511 45.455 0.00 0.00 0.00 2.71
1705 2559 2.086869 CGTGGATCTTTGCCTTCACAT 58.913 47.619 0.00 0.00 0.00 3.21
1706 2560 1.071542 TCGTGGATCTTTGCCTTCACA 59.928 47.619 0.00 0.00 0.00 3.58
1707 2561 1.464997 GTCGTGGATCTTTGCCTTCAC 59.535 52.381 0.00 0.00 0.00 3.18
1708 2562 1.071542 TGTCGTGGATCTTTGCCTTCA 59.928 47.619 0.00 0.00 0.00 3.02
1709 2563 1.808411 TGTCGTGGATCTTTGCCTTC 58.192 50.000 0.00 0.00 0.00 3.46
1710 2564 2.154462 CTTGTCGTGGATCTTTGCCTT 58.846 47.619 0.00 0.00 0.00 4.35
1711 2565 1.611673 CCTTGTCGTGGATCTTTGCCT 60.612 52.381 0.00 0.00 0.00 4.75
1712 2566 0.804989 CCTTGTCGTGGATCTTTGCC 59.195 55.000 0.00 0.00 0.00 4.52
1713 2567 1.808411 TCCTTGTCGTGGATCTTTGC 58.192 50.000 0.00 0.00 0.00 3.68
1714 2568 2.744202 CCTTCCTTGTCGTGGATCTTTG 59.256 50.000 0.00 0.00 33.09 2.77
1715 2569 2.876079 GCCTTCCTTGTCGTGGATCTTT 60.876 50.000 0.00 0.00 33.09 2.52
1716 2570 1.339151 GCCTTCCTTGTCGTGGATCTT 60.339 52.381 0.00 0.00 33.09 2.40
1717 2571 0.250513 GCCTTCCTTGTCGTGGATCT 59.749 55.000 0.00 0.00 33.09 2.75
1718 2572 0.036388 TGCCTTCCTTGTCGTGGATC 60.036 55.000 0.00 0.00 33.09 3.36
1719 2573 0.620556 ATGCCTTCCTTGTCGTGGAT 59.379 50.000 0.00 0.00 33.09 3.41
1720 2574 0.036388 GATGCCTTCCTTGTCGTGGA 60.036 55.000 0.00 0.00 0.00 4.02
1721 2575 1.026718 GGATGCCTTCCTTGTCGTGG 61.027 60.000 0.00 0.00 41.78 4.94
1722 2576 1.026718 GGGATGCCTTCCTTGTCGTG 61.027 60.000 0.00 0.00 44.75 4.35
1723 2577 1.201429 AGGGATGCCTTCCTTGTCGT 61.201 55.000 0.00 0.00 44.75 4.34
1724 2578 0.462759 GAGGGATGCCTTCCTTGTCG 60.463 60.000 7.42 0.00 44.75 4.35
1725 2579 0.106967 GGAGGGATGCCTTCCTTGTC 60.107 60.000 7.42 0.00 45.08 3.18
1726 2580 1.915078 CGGAGGGATGCCTTCCTTGT 61.915 60.000 7.42 0.00 46.15 3.16
1727 2581 1.153086 CGGAGGGATGCCTTCCTTG 60.153 63.158 7.42 0.00 46.15 3.61
1728 2582 2.378634 CCGGAGGGATGCCTTCCTT 61.379 63.158 7.42 0.00 46.15 3.36
1729 2583 2.770048 CCGGAGGGATGCCTTCCT 60.770 66.667 7.42 0.00 46.15 3.36
1745 2599 4.479993 ATGAGGCGCTGCTGGTCC 62.480 66.667 7.64 0.00 0.00 4.46
1746 2600 2.866085 AAGATGAGGCGCTGCTGGTC 62.866 60.000 7.64 0.00 0.00 4.02
1747 2601 2.866085 GAAGATGAGGCGCTGCTGGT 62.866 60.000 7.64 0.00 0.00 4.00
1748 2602 2.124819 AAGATGAGGCGCTGCTGG 60.125 61.111 7.64 0.00 0.00 4.85
1749 2603 2.523507 CGAAGATGAGGCGCTGCTG 61.524 63.158 7.64 0.00 0.00 4.41
1769 2983 3.729965 ATCCTCGAGCTGCTTGCCG 62.730 63.158 12.16 7.44 44.23 5.69
1802 3016 3.193691 ACTCCTTCTGGATGTTGTAGTCG 59.806 47.826 0.00 0.00 42.29 4.18
1883 3097 1.745489 GGTGATGGTCTTGCCCGTC 60.745 63.158 0.00 0.00 40.37 4.79
1886 3100 0.967380 CCAAGGTGATGGTCTTGCCC 60.967 60.000 0.00 0.00 39.07 5.36
1944 3158 1.918957 CCCTCCTTGTCCTGGATCTTT 59.081 52.381 0.00 0.00 32.56 2.52
1989 3203 2.817423 CTGCTTGCCGGCGAAGATC 61.817 63.158 30.45 19.21 34.52 2.75
1998 3212 4.441695 TCCTCGAGCTGCTTGCCG 62.442 66.667 12.16 7.44 44.23 5.69
2109 3687 1.738099 CCCAGAGACGGAAACAGCG 60.738 63.158 0.00 0.00 0.00 5.18
2114 3692 1.070134 CTGTGAACCCAGAGACGGAAA 59.930 52.381 0.00 0.00 35.87 3.13
2118 3696 0.038159 GACCTGTGAACCCAGAGACG 60.038 60.000 0.00 0.00 35.87 4.18
2145 3728 3.428999 CGACAGAATTGGAGTACACCGAT 60.429 47.826 6.26 6.26 35.73 4.18
2161 3744 5.707242 AACAGAGATAGAAACACGACAGA 57.293 39.130 0.00 0.00 0.00 3.41
2162 3745 7.030165 ACATAACAGAGATAGAAACACGACAG 58.970 38.462 0.00 0.00 0.00 3.51
2163 3746 6.920817 ACATAACAGAGATAGAAACACGACA 58.079 36.000 0.00 0.00 0.00 4.35
2178 3780 9.692749 TTTGTAAACACAAACAAACATAACAGA 57.307 25.926 0.00 0.00 39.88 3.41
2266 3869 9.955208 ACAAACGATAGAATTACACACGATATA 57.045 29.630 0.00 0.00 41.38 0.86
2308 3911 5.809562 CCAGTTCAAGAATCTGCAGTAGTAG 59.190 44.000 14.67 1.18 0.00 2.57
2310 3913 4.040952 ACCAGTTCAAGAATCTGCAGTAGT 59.959 41.667 14.67 0.00 0.00 2.73
2311 3914 4.573900 ACCAGTTCAAGAATCTGCAGTAG 58.426 43.478 14.67 0.00 0.00 2.57
2313 3916 3.181451 TGACCAGTTCAAGAATCTGCAGT 60.181 43.478 14.67 0.00 0.00 4.40
2316 3919 6.150140 ACTTAATGACCAGTTCAAGAATCTGC 59.850 38.462 0.00 0.00 37.92 4.26
2344 3947 9.507329 AGACAGTTAAATGCTAGAATTTTCTCA 57.493 29.630 14.04 0.00 38.70 3.27
2357 3960 5.687285 CCAGAACACAAAGACAGTTAAATGC 59.313 40.000 2.17 0.00 0.00 3.56
2362 3965 4.497291 ACCCAGAACACAAAGACAGTTA 57.503 40.909 0.00 0.00 0.00 2.24
2363 3966 3.366052 ACCCAGAACACAAAGACAGTT 57.634 42.857 0.00 0.00 0.00 3.16
2364 3967 3.366052 AACCCAGAACACAAAGACAGT 57.634 42.857 0.00 0.00 0.00 3.55
2368 3971 5.125417 CAGAAGAAAACCCAGAACACAAAGA 59.875 40.000 0.00 0.00 0.00 2.52
2369 3972 5.125417 TCAGAAGAAAACCCAGAACACAAAG 59.875 40.000 0.00 0.00 0.00 2.77
2372 3975 4.229304 TCAGAAGAAAACCCAGAACACA 57.771 40.909 0.00 0.00 0.00 3.72
2373 3976 4.881850 TCTTCAGAAGAAAACCCAGAACAC 59.118 41.667 10.68 0.00 33.83 3.32
2374 3977 5.110814 TCTTCAGAAGAAAACCCAGAACA 57.889 39.130 10.68 0.00 33.83 3.18
2385 3988 5.674525 TCTCTTGCTGTTTCTTCAGAAGAA 58.325 37.500 19.96 19.96 45.30 2.52
2387 3990 5.933463 AGATCTCTTGCTGTTTCTTCAGAAG 59.067 40.000 3.45 3.45 37.61 2.85
2388 3991 5.862845 AGATCTCTTGCTGTTTCTTCAGAA 58.137 37.500 0.00 0.00 37.61 3.02
2389 3992 5.480642 AGATCTCTTGCTGTTTCTTCAGA 57.519 39.130 0.00 0.00 37.61 3.27
2390 3993 5.929278 CAAGATCTCTTGCTGTTTCTTCAG 58.071 41.667 6.98 0.00 45.59 3.02
2391 3994 5.936686 CAAGATCTCTTGCTGTTTCTTCA 57.063 39.130 6.98 0.00 45.59 3.02
2403 4006 4.222588 CCTGACCAGAAGACAAGATCTCTT 59.777 45.833 0.00 0.00 36.27 2.85
2404 4007 3.768757 CCTGACCAGAAGACAAGATCTCT 59.231 47.826 0.00 0.00 36.27 3.10
2405 4008 3.678529 GCCTGACCAGAAGACAAGATCTC 60.679 52.174 0.00 0.00 36.27 2.75
2406 4009 2.235898 GCCTGACCAGAAGACAAGATCT 59.764 50.000 0.00 0.00 40.46 2.75
2413 4016 3.259625 AGTTCTAAGCCTGACCAGAAGAC 59.740 47.826 0.00 0.00 0.00 3.01
2438 4041 3.263170 TCAAGCTCAGGCCAAGTTATGTA 59.737 43.478 5.01 0.00 39.73 2.29
2440 4043 2.715046 TCAAGCTCAGGCCAAGTTATG 58.285 47.619 5.01 3.39 39.73 1.90
2506 4110 9.507329 TCTCTTTTTCTTATTGCAGTACATCTT 57.493 29.630 0.00 0.00 0.00 2.40
2507 4111 9.507329 TTCTCTTTTTCTTATTGCAGTACATCT 57.493 29.630 0.00 0.00 0.00 2.90
2508 4112 9.548208 GTTCTCTTTTTCTTATTGCAGTACATC 57.452 33.333 0.00 0.00 0.00 3.06
2509 4113 9.289782 AGTTCTCTTTTTCTTATTGCAGTACAT 57.710 29.630 0.00 0.00 0.00 2.29
2510 4114 8.677148 AGTTCTCTTTTTCTTATTGCAGTACA 57.323 30.769 0.00 0.00 0.00 2.90
2511 4115 9.387123 CAAGTTCTCTTTTTCTTATTGCAGTAC 57.613 33.333 0.00 0.00 0.00 2.73
2512 4116 9.120538 ACAAGTTCTCTTTTTCTTATTGCAGTA 57.879 29.630 0.00 0.00 0.00 2.74
2513 4117 8.000780 ACAAGTTCTCTTTTTCTTATTGCAGT 57.999 30.769 0.00 0.00 0.00 4.40
2514 4118 8.749499 CAACAAGTTCTCTTTTTCTTATTGCAG 58.251 33.333 0.00 0.00 0.00 4.41
2515 4119 8.250332 ACAACAAGTTCTCTTTTTCTTATTGCA 58.750 29.630 0.00 0.00 30.53 4.08
2516 4120 8.534778 CACAACAAGTTCTCTTTTTCTTATTGC 58.465 33.333 0.00 0.00 30.53 3.56
2517 4121 9.787532 TCACAACAAGTTCTCTTTTTCTTATTG 57.212 29.630 0.00 0.00 32.72 1.90
2527 4131 9.342308 TGAATCTAATTCACAACAAGTTCTCTT 57.658 29.630 0.00 0.00 43.84 2.85
2528 4132 8.908786 TGAATCTAATTCACAACAAGTTCTCT 57.091 30.769 0.00 0.00 43.84 3.10
2561 4165 9.295825 TCCACAGATTTTATCTTACAACACAAT 57.704 29.630 0.00 0.00 37.58 2.71
2562 4166 8.684386 TCCACAGATTTTATCTTACAACACAA 57.316 30.769 0.00 0.00 37.58 3.33
2563 4167 7.390440 CCTCCACAGATTTTATCTTACAACACA 59.610 37.037 0.00 0.00 37.58 3.72
2564 4168 7.606456 TCCTCCACAGATTTTATCTTACAACAC 59.394 37.037 0.00 0.00 37.58 3.32
2565 4169 7.685481 TCCTCCACAGATTTTATCTTACAACA 58.315 34.615 0.00 0.00 37.58 3.33
2566 4170 8.041323 TCTCCTCCACAGATTTTATCTTACAAC 58.959 37.037 0.00 0.00 37.58 3.32
2567 4171 8.146053 TCTCCTCCACAGATTTTATCTTACAA 57.854 34.615 0.00 0.00 37.58 2.41
2568 4172 7.733773 TCTCCTCCACAGATTTTATCTTACA 57.266 36.000 0.00 0.00 37.58 2.41
2629 4233 9.337396 GTTTCCCCTTTCTTTTGTTTTGAATAT 57.663 29.630 0.00 0.00 0.00 1.28
2630 4234 7.492994 CGTTTCCCCTTTCTTTTGTTTTGAATA 59.507 33.333 0.00 0.00 0.00 1.75
2631 4235 6.315144 CGTTTCCCCTTTCTTTTGTTTTGAAT 59.685 34.615 0.00 0.00 0.00 2.57
2632 4236 5.639931 CGTTTCCCCTTTCTTTTGTTTTGAA 59.360 36.000 0.00 0.00 0.00 2.69
2633 4237 5.172205 CGTTTCCCCTTTCTTTTGTTTTGA 58.828 37.500 0.00 0.00 0.00 2.69
2634 4238 4.932799 ACGTTTCCCCTTTCTTTTGTTTTG 59.067 37.500 0.00 0.00 0.00 2.44
2635 4239 4.932799 CACGTTTCCCCTTTCTTTTGTTTT 59.067 37.500 0.00 0.00 0.00 2.43
2636 4240 4.500127 CACGTTTCCCCTTTCTTTTGTTT 58.500 39.130 0.00 0.00 0.00 2.83
2637 4241 3.118920 CCACGTTTCCCCTTTCTTTTGTT 60.119 43.478 0.00 0.00 0.00 2.83
2638 4242 2.429250 CCACGTTTCCCCTTTCTTTTGT 59.571 45.455 0.00 0.00 0.00 2.83
2639 4243 2.691011 TCCACGTTTCCCCTTTCTTTTG 59.309 45.455 0.00 0.00 0.00 2.44
2640 4244 3.021177 TCCACGTTTCCCCTTTCTTTT 57.979 42.857 0.00 0.00 0.00 2.27
2641 4245 2.740506 TCCACGTTTCCCCTTTCTTT 57.259 45.000 0.00 0.00 0.00 2.52
2642 4246 2.107552 TCATCCACGTTTCCCCTTTCTT 59.892 45.455 0.00 0.00 0.00 2.52
2643 4247 1.702957 TCATCCACGTTTCCCCTTTCT 59.297 47.619 0.00 0.00 0.00 2.52
2644 4248 2.194201 TCATCCACGTTTCCCCTTTC 57.806 50.000 0.00 0.00 0.00 2.62
2645 4249 2.668144 TTCATCCACGTTTCCCCTTT 57.332 45.000 0.00 0.00 0.00 3.11
2646 4250 2.899303 ATTCATCCACGTTTCCCCTT 57.101 45.000 0.00 0.00 0.00 3.95
2647 4251 2.844348 AGTATTCATCCACGTTTCCCCT 59.156 45.455 0.00 0.00 0.00 4.79
2648 4252 3.277142 AGTATTCATCCACGTTTCCCC 57.723 47.619 0.00 0.00 0.00 4.81
2649 4253 3.181500 GCAAGTATTCATCCACGTTTCCC 60.181 47.826 0.00 0.00 0.00 3.97
2650 4254 3.438781 TGCAAGTATTCATCCACGTTTCC 59.561 43.478 0.00 0.00 0.00 3.13
2651 4255 4.391830 TCTGCAAGTATTCATCCACGTTTC 59.608 41.667 0.00 0.00 33.76 2.78
2652 4256 4.323417 TCTGCAAGTATTCATCCACGTTT 58.677 39.130 0.00 0.00 33.76 3.60
2653 4257 3.937814 TCTGCAAGTATTCATCCACGTT 58.062 40.909 0.00 0.00 33.76 3.99
2654 4258 3.610040 TCTGCAAGTATTCATCCACGT 57.390 42.857 0.00 0.00 33.76 4.49
2655 4259 5.490139 AATTCTGCAAGTATTCATCCACG 57.510 39.130 0.00 0.00 26.46 4.94
2656 4260 7.542025 AGAAAATTCTGCAAGTATTCATCCAC 58.458 34.615 0.00 0.00 32.42 4.02
2657 4261 7.707624 AGAAAATTCTGCAAGTATTCATCCA 57.292 32.000 0.00 0.00 32.42 3.41
2658 4262 8.866956 CAAAGAAAATTCTGCAAGTATTCATCC 58.133 33.333 0.00 0.00 32.42 3.51
2659 4263 9.415544 ACAAAGAAAATTCTGCAAGTATTCATC 57.584 29.630 0.00 0.00 32.42 2.92
2660 4264 9.768662 AACAAAGAAAATTCTGCAAGTATTCAT 57.231 25.926 0.00 0.00 32.42 2.57
2661 4265 9.598517 AAACAAAGAAAATTCTGCAAGTATTCA 57.401 25.926 0.00 0.00 32.42 2.57
2663 4267 9.045223 GGAAACAAAGAAAATTCTGCAAGTATT 57.955 29.630 0.00 0.00 35.30 1.89
2664 4268 8.424133 AGGAAACAAAGAAAATTCTGCAAGTAT 58.576 29.630 0.00 0.00 37.65 2.12
2665 4269 7.706179 CAGGAAACAAAGAAAATTCTGCAAGTA 59.294 33.333 0.00 0.00 37.65 2.24
2666 4270 6.536224 CAGGAAACAAAGAAAATTCTGCAAGT 59.464 34.615 0.00 0.00 37.65 3.16
2667 4271 6.536224 ACAGGAAACAAAGAAAATTCTGCAAG 59.464 34.615 0.00 0.00 37.65 4.01
2668 4272 6.405538 ACAGGAAACAAAGAAAATTCTGCAA 58.594 32.000 0.00 0.00 37.65 4.08
2669 4273 5.976458 ACAGGAAACAAAGAAAATTCTGCA 58.024 33.333 0.00 0.00 37.65 4.41
2670 4274 6.708676 CAACAGGAAACAAAGAAAATTCTGC 58.291 36.000 0.00 0.00 37.65 4.26
2671 4275 6.536224 AGCAACAGGAAACAAAGAAAATTCTG 59.464 34.615 0.00 0.00 37.65 3.02
2672 4276 6.643388 AGCAACAGGAAACAAAGAAAATTCT 58.357 32.000 0.00 0.00 39.74 2.40
2673 4277 6.908870 AGCAACAGGAAACAAAGAAAATTC 57.091 33.333 0.00 0.00 0.00 2.17
2674 4278 8.962884 AATAGCAACAGGAAACAAAGAAAATT 57.037 26.923 0.00 0.00 0.00 1.82
2675 4279 8.829612 CAAATAGCAACAGGAAACAAAGAAAAT 58.170 29.630 0.00 0.00 0.00 1.82
2676 4280 7.821846 ACAAATAGCAACAGGAAACAAAGAAAA 59.178 29.630 0.00 0.00 0.00 2.29
2677 4281 7.327214 ACAAATAGCAACAGGAAACAAAGAAA 58.673 30.769 0.00 0.00 0.00 2.52
2678 4282 6.872920 ACAAATAGCAACAGGAAACAAAGAA 58.127 32.000 0.00 0.00 0.00 2.52
2679 4283 6.460953 GGACAAATAGCAACAGGAAACAAAGA 60.461 38.462 0.00 0.00 0.00 2.52
2680 4284 5.691754 GGACAAATAGCAACAGGAAACAAAG 59.308 40.000 0.00 0.00 0.00 2.77
2681 4285 5.452636 GGGACAAATAGCAACAGGAAACAAA 60.453 40.000 0.00 0.00 0.00 2.83
2682 4286 4.038642 GGGACAAATAGCAACAGGAAACAA 59.961 41.667 0.00 0.00 0.00 2.83
2683 4287 3.572255 GGGACAAATAGCAACAGGAAACA 59.428 43.478 0.00 0.00 0.00 2.83
2684 4288 3.826729 AGGGACAAATAGCAACAGGAAAC 59.173 43.478 0.00 0.00 0.00 2.78
2685 4289 4.112634 AGGGACAAATAGCAACAGGAAA 57.887 40.909 0.00 0.00 0.00 3.13
2686 4290 3.806949 AGGGACAAATAGCAACAGGAA 57.193 42.857 0.00 0.00 0.00 3.36
2687 4291 4.473196 TCATAGGGACAAATAGCAACAGGA 59.527 41.667 0.00 0.00 0.00 3.86
2688 4292 4.780815 TCATAGGGACAAATAGCAACAGG 58.219 43.478 0.00 0.00 0.00 4.00
2689 4293 7.063898 CGATATCATAGGGACAAATAGCAACAG 59.936 40.741 3.12 0.00 0.00 3.16
2690 4294 6.873605 CGATATCATAGGGACAAATAGCAACA 59.126 38.462 3.12 0.00 0.00 3.33
2691 4295 7.097192 TCGATATCATAGGGACAAATAGCAAC 58.903 38.462 3.12 0.00 0.00 4.17
2692 4296 7.239763 TCGATATCATAGGGACAAATAGCAA 57.760 36.000 3.12 0.00 0.00 3.91
2693 4297 6.850752 TCGATATCATAGGGACAAATAGCA 57.149 37.500 3.12 0.00 0.00 3.49
2694 4298 7.819900 ACTTTCGATATCATAGGGACAAATAGC 59.180 37.037 3.12 0.00 0.00 2.97
2697 4301 8.095169 GGTACTTTCGATATCATAGGGACAAAT 58.905 37.037 3.12 0.00 0.00 2.32
2698 4302 7.289317 AGGTACTTTCGATATCATAGGGACAAA 59.711 37.037 3.12 0.00 27.25 2.83
2699 4303 6.781014 AGGTACTTTCGATATCATAGGGACAA 59.219 38.462 3.12 0.00 27.25 3.18
2700 4304 6.312529 AGGTACTTTCGATATCATAGGGACA 58.687 40.000 3.12 0.00 27.25 4.02
2701 4305 6.837471 AGGTACTTTCGATATCATAGGGAC 57.163 41.667 3.12 0.00 27.25 4.46
2720 4324 0.837260 AGCCCGGGTGTACAAAGGTA 60.837 55.000 24.63 0.00 0.00 3.08
2721 4325 2.120737 GAGCCCGGGTGTACAAAGGT 62.121 60.000 24.63 0.00 0.00 3.50
2722 4326 1.376812 GAGCCCGGGTGTACAAAGG 60.377 63.158 24.63 1.00 0.00 3.11
2723 4327 0.250553 TTGAGCCCGGGTGTACAAAG 60.251 55.000 24.63 0.00 0.00 2.77
2724 4328 0.183014 TTTGAGCCCGGGTGTACAAA 59.817 50.000 24.63 23.14 0.00 2.83
2725 4329 0.402504 ATTTGAGCCCGGGTGTACAA 59.597 50.000 24.63 19.03 0.00 2.41
2726 4330 0.322098 CATTTGAGCCCGGGTGTACA 60.322 55.000 24.63 14.17 0.00 2.90
2727 4331 1.654023 GCATTTGAGCCCGGGTGTAC 61.654 60.000 24.63 11.62 0.00 2.90
2728 4332 1.377987 GCATTTGAGCCCGGGTGTA 60.378 57.895 24.63 5.36 0.00 2.90
2729 4333 2.676471 GCATTTGAGCCCGGGTGT 60.676 61.111 24.63 10.28 0.00 4.16
2730 4334 2.361610 AGCATTTGAGCCCGGGTG 60.362 61.111 24.63 12.63 34.23 4.61
2731 4335 2.044946 GAGCATTTGAGCCCGGGT 60.045 61.111 24.63 9.10 34.23 5.28
2732 4336 1.379044 AAGAGCATTTGAGCCCGGG 60.379 57.895 19.09 19.09 34.23 5.73
2733 4337 0.962356 ACAAGAGCATTTGAGCCCGG 60.962 55.000 0.00 0.00 34.23 5.73
2734 4338 0.883833 AACAAGAGCATTTGAGCCCG 59.116 50.000 7.14 0.00 34.23 6.13
2735 4339 1.615392 ACAACAAGAGCATTTGAGCCC 59.385 47.619 7.14 0.00 34.23 5.19
2736 4340 2.294233 TCACAACAAGAGCATTTGAGCC 59.706 45.455 7.14 0.00 34.23 4.70
2737 4341 3.631145 TCACAACAAGAGCATTTGAGC 57.369 42.857 7.14 0.00 0.00 4.26
2738 4342 4.923893 TGTTCACAACAAGAGCATTTGAG 58.076 39.130 7.14 2.70 38.72 3.02
2739 4343 4.398988 ACTGTTCACAACAAGAGCATTTGA 59.601 37.500 7.14 0.00 41.61 2.69
2740 4344 4.501559 CACTGTTCACAACAAGAGCATTTG 59.498 41.667 0.00 0.00 41.61 2.32
2741 4345 4.398988 TCACTGTTCACAACAAGAGCATTT 59.601 37.500 0.00 0.00 41.61 2.32
2742 4346 3.947196 TCACTGTTCACAACAAGAGCATT 59.053 39.130 0.00 0.00 41.61 3.56
2743 4347 3.544684 TCACTGTTCACAACAAGAGCAT 58.455 40.909 0.00 0.00 41.61 3.79
2744 4348 2.984562 TCACTGTTCACAACAAGAGCA 58.015 42.857 0.00 0.00 41.61 4.26
2745 4349 4.355543 TTTCACTGTTCACAACAAGAGC 57.644 40.909 0.00 0.00 41.61 4.09
2746 4350 6.122850 TCATTTCACTGTTCACAACAAGAG 57.877 37.500 0.00 0.00 41.61 2.85
2747 4351 6.507958 TTCATTTCACTGTTCACAACAAGA 57.492 33.333 0.00 0.00 41.61 3.02
2748 4352 7.028962 TCTTTCATTTCACTGTTCACAACAAG 58.971 34.615 0.00 0.00 41.61 3.16
2749 4353 6.918626 TCTTTCATTTCACTGTTCACAACAA 58.081 32.000 0.00 0.00 41.61 2.83
2750 4354 6.507958 TCTTTCATTTCACTGTTCACAACA 57.492 33.333 0.00 0.00 39.52 3.33
2751 4355 7.992180 ATTCTTTCATTTCACTGTTCACAAC 57.008 32.000 0.00 0.00 0.00 3.32
2752 4356 8.352201 CCTATTCTTTCATTTCACTGTTCACAA 58.648 33.333 0.00 0.00 0.00 3.33
2753 4357 7.719193 TCCTATTCTTTCATTTCACTGTTCACA 59.281 33.333 0.00 0.00 0.00 3.58
2754 4358 8.099364 TCCTATTCTTTCATTTCACTGTTCAC 57.901 34.615 0.00 0.00 0.00 3.18
2755 4359 8.690203 TTCCTATTCTTTCATTTCACTGTTCA 57.310 30.769 0.00 0.00 0.00 3.18
2756 4360 9.965824 TTTTCCTATTCTTTCATTTCACTGTTC 57.034 29.630 0.00 0.00 0.00 3.18
2810 4414 9.409312 CATGCACAAAACATATTTCTTGAAGTA 57.591 29.630 0.00 0.00 0.00 2.24
2811 4415 7.095523 GCATGCACAAAACATATTTCTTGAAGT 60.096 33.333 14.21 0.00 0.00 3.01
2812 4416 7.095565 TGCATGCACAAAACATATTTCTTGAAG 60.096 33.333 18.46 0.00 0.00 3.02
2813 4417 6.704937 TGCATGCACAAAACATATTTCTTGAA 59.295 30.769 18.46 0.00 0.00 2.69
2814 4418 6.221659 TGCATGCACAAAACATATTTCTTGA 58.778 32.000 18.46 0.00 0.00 3.02
2815 4419 6.469139 TGCATGCACAAAACATATTTCTTG 57.531 33.333 18.46 0.00 0.00 3.02
2816 4420 7.493743 TTTGCATGCACAAAACATATTTCTT 57.506 28.000 22.58 0.00 36.62 2.52
2817 4421 7.493743 TTTTGCATGCACAAAACATATTTCT 57.506 28.000 22.58 0.00 42.88 2.52
2827 4431 8.095937 TCATGATAAAATTTTGCATGCACAAA 57.904 26.923 26.99 22.08 37.74 2.83
2828 4432 7.668525 TCATGATAAAATTTTGCATGCACAA 57.331 28.000 26.99 21.53 35.80 3.33
2829 4433 7.668525 TTCATGATAAAATTTTGCATGCACA 57.331 28.000 26.99 12.14 35.80 4.57
2830 4434 9.217223 GATTTCATGATAAAATTTTGCATGCAC 57.783 29.630 26.99 18.91 35.80 4.57
2831 4435 8.947115 TGATTTCATGATAAAATTTTGCATGCA 58.053 25.926 26.99 18.46 35.80 3.96
2832 4436 9.217223 GTGATTTCATGATAAAATTTTGCATGC 57.783 29.630 26.99 11.82 35.80 4.06
2856 4460 2.438868 TCACGACTCTCACCAATGTG 57.561 50.000 0.00 0.00 44.18 3.21
2857 4461 3.469008 TTTCACGACTCTCACCAATGT 57.531 42.857 0.00 0.00 0.00 2.71
2858 4462 4.811555 TTTTTCACGACTCTCACCAATG 57.188 40.909 0.00 0.00 0.00 2.82
2880 4484 6.041296 AGACACATTTTGGAGCTCTGATTTTT 59.959 34.615 14.64 0.00 0.00 1.94
2881 4485 5.537674 AGACACATTTTGGAGCTCTGATTTT 59.462 36.000 14.64 0.00 0.00 1.82
2882 4486 5.048224 CAGACACATTTTGGAGCTCTGATTT 60.048 40.000 14.64 0.00 0.00 2.17
2883 4487 4.458295 CAGACACATTTTGGAGCTCTGATT 59.542 41.667 14.64 0.00 0.00 2.57
2884 4488 4.008330 CAGACACATTTTGGAGCTCTGAT 58.992 43.478 14.64 0.00 0.00 2.90
2885 4489 3.071457 TCAGACACATTTTGGAGCTCTGA 59.929 43.478 14.64 1.59 32.25 3.27
2886 4490 3.405831 TCAGACACATTTTGGAGCTCTG 58.594 45.455 14.64 6.00 0.00 3.35
2887 4491 3.777106 TCAGACACATTTTGGAGCTCT 57.223 42.857 14.64 0.00 0.00 4.09
2888 4492 4.836125 TTTCAGACACATTTTGGAGCTC 57.164 40.909 4.71 4.71 0.00 4.09
2889 4493 5.796424 ATTTTCAGACACATTTTGGAGCT 57.204 34.783 0.00 0.00 0.00 4.09
2890 4494 6.922957 TGTTATTTTCAGACACATTTTGGAGC 59.077 34.615 0.00 0.00 0.00 4.70
2891 4495 9.480053 AATGTTATTTTCAGACACATTTTGGAG 57.520 29.630 0.00 0.00 35.05 3.86
2892 4496 9.829507 AAATGTTATTTTCAGACACATTTTGGA 57.170 25.926 3.32 0.00 42.63 3.53
2897 4501 8.981647 GCTCAAAATGTTATTTTCAGACACATT 58.018 29.630 2.69 0.00 39.26 2.71
2898 4502 8.143193 TGCTCAAAATGTTATTTTCAGACACAT 58.857 29.630 2.69 0.00 0.00 3.21
2899 4503 7.487484 TGCTCAAAATGTTATTTTCAGACACA 58.513 30.769 2.69 0.00 0.00 3.72
2900 4504 7.928908 TGCTCAAAATGTTATTTTCAGACAC 57.071 32.000 2.69 0.00 0.00 3.67
2901 4505 7.978414 TGTTGCTCAAAATGTTATTTTCAGACA 59.022 29.630 2.69 0.00 0.00 3.41
2902 4506 8.351495 TGTTGCTCAAAATGTTATTTTCAGAC 57.649 30.769 2.69 0.00 0.00 3.51
2903 4507 9.545105 AATGTTGCTCAAAATGTTATTTTCAGA 57.455 25.926 2.69 0.00 0.00 3.27
2912 4516 9.473640 AAAAACAAAAATGTTGCTCAAAATGTT 57.526 22.222 0.00 0.00 31.64 2.71
2935 4539 0.661780 CGAAATGGCGTGGCGAAAAA 60.662 50.000 0.00 0.00 0.00 1.94
2936 4540 1.081774 CGAAATGGCGTGGCGAAAA 60.082 52.632 0.00 0.00 0.00 2.29
2937 4541 2.255172 ACGAAATGGCGTGGCGAAA 61.255 52.632 8.23 0.00 43.79 3.46
2938 4542 2.666862 ACGAAATGGCGTGGCGAA 60.667 55.556 8.23 0.00 43.79 4.70
2964 4568 6.716934 TTTAAGGTTTGGAGTGTATGCAAA 57.283 33.333 0.00 0.00 45.75 3.68
2965 4569 6.909550 ATTTAAGGTTTGGAGTGTATGCAA 57.090 33.333 0.00 0.00 37.48 4.08
2966 4570 6.909550 AATTTAAGGTTTGGAGTGTATGCA 57.090 33.333 0.00 0.00 0.00 3.96
2967 4571 8.017587 CAAAATTTAAGGTTTGGAGTGTATGC 57.982 34.615 0.00 0.00 32.26 3.14
2977 4581 5.512473 TCGACGTCCAAAATTTAAGGTTTG 58.488 37.500 10.58 6.13 35.03 2.93
2978 4582 5.754543 TCGACGTCCAAAATTTAAGGTTT 57.245 34.783 10.58 0.00 0.00 3.27
2979 4583 5.952526 ATCGACGTCCAAAATTTAAGGTT 57.047 34.783 10.58 0.00 0.00 3.50
2980 4584 6.652062 AGTTATCGACGTCCAAAATTTAAGGT 59.348 34.615 10.58 2.44 0.00 3.50
2981 4585 6.959311 CAGTTATCGACGTCCAAAATTTAAGG 59.041 38.462 10.58 0.00 0.00 2.69
2982 4586 6.464834 GCAGTTATCGACGTCCAAAATTTAAG 59.535 38.462 10.58 0.00 0.00 1.85
2983 4587 6.308675 GCAGTTATCGACGTCCAAAATTTAA 58.691 36.000 10.58 0.00 0.00 1.52
2984 4588 5.163834 GGCAGTTATCGACGTCCAAAATTTA 60.164 40.000 10.58 0.00 0.00 1.40
2985 4589 4.379082 GGCAGTTATCGACGTCCAAAATTT 60.379 41.667 10.58 0.00 0.00 1.82
2986 4590 3.126343 GGCAGTTATCGACGTCCAAAATT 59.874 43.478 10.58 0.00 0.00 1.82
2987 4591 2.676342 GGCAGTTATCGACGTCCAAAAT 59.324 45.455 10.58 1.47 0.00 1.82
2988 4592 2.070783 GGCAGTTATCGACGTCCAAAA 58.929 47.619 10.58 0.00 0.00 2.44
2989 4593 1.001068 TGGCAGTTATCGACGTCCAAA 59.999 47.619 10.58 0.00 33.60 3.28
2990 4594 0.604073 TGGCAGTTATCGACGTCCAA 59.396 50.000 10.58 0.00 33.60 3.53
2991 4595 0.108992 GTGGCAGTTATCGACGTCCA 60.109 55.000 10.58 0.00 33.94 4.02
2992 4596 0.108992 TGTGGCAGTTATCGACGTCC 60.109 55.000 10.58 0.00 0.00 4.79
2993 4597 0.989890 GTGTGGCAGTTATCGACGTC 59.010 55.000 5.18 5.18 0.00 4.34
2994 4598 0.731514 CGTGTGGCAGTTATCGACGT 60.732 55.000 0.00 0.00 0.00 4.34
2995 4599 0.731514 ACGTGTGGCAGTTATCGACG 60.732 55.000 0.00 0.00 0.00 5.12
2996 4600 0.713883 CACGTGTGGCAGTTATCGAC 59.286 55.000 7.58 0.00 0.00 4.20
2997 4601 0.315886 ACACGTGTGGCAGTTATCGA 59.684 50.000 22.71 0.00 34.19 3.59
2998 4602 0.438445 CACACGTGTGGCAGTTATCG 59.562 55.000 35.65 10.61 42.10 2.92
3008 4612 1.013596 TCTTTTCTGCCACACGTGTG 58.986 50.000 36.13 36.13 45.23 3.82
3009 4613 1.670811 CTTCTTTTCTGCCACACGTGT 59.329 47.619 17.22 17.22 0.00 4.49
3010 4614 1.939934 TCTTCTTTTCTGCCACACGTG 59.060 47.619 15.48 15.48 0.00 4.49
3011 4615 2.325583 TCTTCTTTTCTGCCACACGT 57.674 45.000 0.00 0.00 0.00 4.49
3012 4616 2.666619 GCATCTTCTTTTCTGCCACACG 60.667 50.000 0.00 0.00 0.00 4.49
3013 4617 2.294233 TGCATCTTCTTTTCTGCCACAC 59.706 45.455 0.00 0.00 33.70 3.82
3014 4618 2.294233 GTGCATCTTCTTTTCTGCCACA 59.706 45.455 0.00 0.00 33.70 4.17
3015 4619 2.352127 GGTGCATCTTCTTTTCTGCCAC 60.352 50.000 0.00 0.00 33.70 5.01
3016 4620 1.888512 GGTGCATCTTCTTTTCTGCCA 59.111 47.619 0.00 0.00 33.70 4.92
3017 4621 1.888512 TGGTGCATCTTCTTTTCTGCC 59.111 47.619 0.00 0.00 33.70 4.85
3018 4622 2.294233 TGTGGTGCATCTTCTTTTCTGC 59.706 45.455 0.00 0.00 35.21 4.26
3019 4623 3.607775 CGTGTGGTGCATCTTCTTTTCTG 60.608 47.826 0.00 0.00 0.00 3.02
3020 4624 2.549754 CGTGTGGTGCATCTTCTTTTCT 59.450 45.455 0.00 0.00 0.00 2.52
3021 4625 2.290641 ACGTGTGGTGCATCTTCTTTTC 59.709 45.455 0.00 0.00 0.00 2.29
3022 4626 2.290641 GACGTGTGGTGCATCTTCTTTT 59.709 45.455 0.00 0.00 0.00 2.27
3023 4627 1.873591 GACGTGTGGTGCATCTTCTTT 59.126 47.619 0.00 0.00 0.00 2.52
3024 4628 1.070758 AGACGTGTGGTGCATCTTCTT 59.929 47.619 0.00 0.00 0.00 2.52
3025 4629 0.681733 AGACGTGTGGTGCATCTTCT 59.318 50.000 0.00 0.00 0.00 2.85
3026 4630 1.071605 GAGACGTGTGGTGCATCTTC 58.928 55.000 0.00 0.00 0.00 2.87
3027 4631 0.681733 AGAGACGTGTGGTGCATCTT 59.318 50.000 0.00 0.00 0.00 2.40
3028 4632 1.545841 TAGAGACGTGTGGTGCATCT 58.454 50.000 0.00 0.00 0.00 2.90
3029 4633 2.363788 TTAGAGACGTGTGGTGCATC 57.636 50.000 0.00 0.00 0.00 3.91
3030 4634 2.621338 CATTAGAGACGTGTGGTGCAT 58.379 47.619 0.00 0.00 0.00 3.96
3031 4635 1.939381 GCATTAGAGACGTGTGGTGCA 60.939 52.381 0.00 0.00 0.00 4.57
3032 4636 0.721718 GCATTAGAGACGTGTGGTGC 59.278 55.000 0.00 0.00 0.00 5.01
3033 4637 2.078849 TGCATTAGAGACGTGTGGTG 57.921 50.000 0.00 0.00 0.00 4.17
3034 4638 2.831685 TTGCATTAGAGACGTGTGGT 57.168 45.000 0.00 0.00 0.00 4.16
3035 4639 5.109210 TCTATTTGCATTAGAGACGTGTGG 58.891 41.667 0.00 0.00 0.00 4.17
3036 4640 6.834959 ATCTATTTGCATTAGAGACGTGTG 57.165 37.500 0.00 0.00 0.00 3.82
3037 4641 7.239166 CAATCTATTTGCATTAGAGACGTGT 57.761 36.000 0.00 0.00 0.00 4.49
3046 4650 9.566723 CGATGACGTGGCAATCTATTTGCATTA 62.567 40.741 11.91 0.00 46.83 1.90
3047 4651 8.851333 CGATGACGTGGCAATCTATTTGCATT 62.851 42.308 11.91 0.00 46.83 3.56
3048 4652 7.482937 CGATGACGTGGCAATCTATTTGCAT 62.483 44.000 11.91 0.00 46.83 3.96
3049 4653 6.254750 CGATGACGTGGCAATCTATTTGCA 62.255 45.833 11.91 0.00 46.83 4.08
3050 4654 3.846023 CGATGACGTGGCAATCTATTTGC 60.846 47.826 0.00 1.76 45.66 3.68
3051 4655 3.846023 GCGATGACGTGGCAATCTATTTG 60.846 47.826 0.00 0.00 41.98 2.32
3052 4656 2.287915 GCGATGACGTGGCAATCTATTT 59.712 45.455 0.00 0.00 41.98 1.40
3053 4657 1.867233 GCGATGACGTGGCAATCTATT 59.133 47.619 0.00 0.00 41.98 1.73
3054 4658 1.202521 TGCGATGACGTGGCAATCTAT 60.203 47.619 1.38 0.00 38.70 1.98
3055 4659 0.174617 TGCGATGACGTGGCAATCTA 59.825 50.000 1.38 0.00 38.70 1.98
3056 4660 0.462581 ATGCGATGACGTGGCAATCT 60.463 50.000 8.50 0.00 44.94 2.40
3057 4661 0.316442 CATGCGATGACGTGGCAATC 60.316 55.000 8.50 0.00 44.94 2.67
3058 4662 1.723273 CATGCGATGACGTGGCAAT 59.277 52.632 8.50 0.00 44.94 3.56
3059 4663 3.037992 GCATGCGATGACGTGGCAA 62.038 57.895 8.50 0.00 44.94 4.52
3060 4664 3.498834 GCATGCGATGACGTGGCA 61.499 61.111 0.00 6.82 45.88 4.92
3061 4665 2.827051 ATGCATGCGATGACGTGGC 61.827 57.895 14.09 0.00 41.98 5.01
3062 4666 1.010462 CATGCATGCGATGACGTGG 60.010 57.895 14.93 0.00 41.98 4.94
3063 4667 0.374410 TTCATGCATGCGATGACGTG 59.626 50.000 22.25 10.85 41.98 4.49
3064 4668 1.003223 CATTCATGCATGCGATGACGT 60.003 47.619 26.04 16.13 41.98 4.34
3065 4669 1.670326 CATTCATGCATGCGATGACG 58.330 50.000 26.04 16.96 42.93 4.35
3072 4676 8.179367 GAAAAGATTCTCGCATTCATGCATGC 62.179 42.308 22.25 18.92 41.84 4.06
3073 4677 5.173312 GAAAAGATTCTCGCATTCATGCATG 59.827 40.000 21.07 21.07 41.84 4.06
3074 4678 5.279384 GAAAAGATTCTCGCATTCATGCAT 58.721 37.500 12.20 0.00 41.84 3.96
3075 4679 4.665212 GAAAAGATTCTCGCATTCATGCA 58.335 39.130 12.20 0.00 41.84 3.96
3076 4680 3.722780 CGAAAAGATTCTCGCATTCATGC 59.277 43.478 1.33 1.33 40.63 4.06
3077 4681 5.147767 TCGAAAAGATTCTCGCATTCATG 57.852 39.130 0.00 0.00 35.04 3.07
3078 4682 5.801350 TTCGAAAAGATTCTCGCATTCAT 57.199 34.783 0.00 0.00 35.04 2.57
3079 4683 5.801350 ATTCGAAAAGATTCTCGCATTCA 57.199 34.783 0.00 0.00 35.04 2.57
3080 4684 7.271223 TGAAAATTCGAAAAGATTCTCGCATTC 59.729 33.333 0.00 0.00 31.28 2.67
3081 4685 7.083858 TGAAAATTCGAAAAGATTCTCGCATT 58.916 30.769 0.00 0.00 33.36 3.56
3082 4686 6.611381 TGAAAATTCGAAAAGATTCTCGCAT 58.389 32.000 0.00 0.00 35.04 4.73
3083 4687 5.996219 TGAAAATTCGAAAAGATTCTCGCA 58.004 33.333 0.00 0.00 35.04 5.10
3084 4688 6.080406 ACTGAAAATTCGAAAAGATTCTCGC 58.920 36.000 0.00 0.00 35.04 5.03
3085 4689 8.494236 AAACTGAAAATTCGAAAAGATTCTCG 57.506 30.769 0.00 3.69 36.39 4.04
3124 4728 9.846248 CTTCAATCGGATTTTTCATTTAAGAGT 57.154 29.630 0.00 0.00 0.00 3.24
3128 4732 9.801873 GGATCTTCAATCGGATTTTTCATTTAA 57.198 29.630 0.00 0.00 0.00 1.52
3129 4733 8.128582 CGGATCTTCAATCGGATTTTTCATTTA 58.871 33.333 0.00 0.00 0.00 1.40
3130 4734 6.974622 CGGATCTTCAATCGGATTTTTCATTT 59.025 34.615 0.00 0.00 0.00 2.32
3131 4735 6.095440 ACGGATCTTCAATCGGATTTTTCATT 59.905 34.615 0.00 0.00 0.00 2.57
3132 4736 5.590259 ACGGATCTTCAATCGGATTTTTCAT 59.410 36.000 0.00 0.00 0.00 2.57
3133 4737 4.941263 ACGGATCTTCAATCGGATTTTTCA 59.059 37.500 0.00 0.00 0.00 2.69
3134 4738 5.485662 ACGGATCTTCAATCGGATTTTTC 57.514 39.130 0.00 0.00 0.00 2.29
3135 4739 5.897377 AACGGATCTTCAATCGGATTTTT 57.103 34.783 0.00 0.00 0.00 1.94
3136 4740 5.897377 AAACGGATCTTCAATCGGATTTT 57.103 34.783 0.00 0.00 0.00 1.82
3137 4741 5.414454 TGAAAACGGATCTTCAATCGGATTT 59.586 36.000 0.00 1.34 0.00 2.17
3138 4742 4.941263 TGAAAACGGATCTTCAATCGGATT 59.059 37.500 0.00 0.00 0.00 3.01
3139 4743 4.332819 GTGAAAACGGATCTTCAATCGGAT 59.667 41.667 0.00 0.00 33.52 4.18
3140 4744 3.682858 GTGAAAACGGATCTTCAATCGGA 59.317 43.478 0.00 0.00 33.52 4.55
3141 4745 3.181510 GGTGAAAACGGATCTTCAATCGG 60.182 47.826 0.00 0.00 33.52 4.18
3142 4746 3.435327 TGGTGAAAACGGATCTTCAATCG 59.565 43.478 0.00 0.00 33.52 3.34
3143 4747 5.567138 ATGGTGAAAACGGATCTTCAATC 57.433 39.130 0.00 0.00 33.52 2.67
3144 4748 5.982890 AATGGTGAAAACGGATCTTCAAT 57.017 34.783 0.00 0.00 33.52 2.57
3145 4749 6.885952 TTAATGGTGAAAACGGATCTTCAA 57.114 33.333 0.00 0.00 33.52 2.69
3146 4750 6.885952 TTTAATGGTGAAAACGGATCTTCA 57.114 33.333 0.00 0.00 0.00 3.02
3147 4751 7.762382 AGATTTAATGGTGAAAACGGATCTTC 58.238 34.615 0.00 0.00 0.00 2.87
3148 4752 7.611855 AGAGATTTAATGGTGAAAACGGATCTT 59.388 33.333 0.00 0.00 0.00 2.40
3149 4753 7.112779 AGAGATTTAATGGTGAAAACGGATCT 58.887 34.615 0.00 0.00 0.00 2.75
3150 4754 7.321745 AGAGATTTAATGGTGAAAACGGATC 57.678 36.000 0.00 0.00 0.00 3.36
3151 4755 6.037172 CGAGAGATTTAATGGTGAAAACGGAT 59.963 38.462 0.00 0.00 0.00 4.18
3152 4756 5.350365 CGAGAGATTTAATGGTGAAAACGGA 59.650 40.000 0.00 0.00 0.00 4.69
3153 4757 5.560148 CGAGAGATTTAATGGTGAAAACGG 58.440 41.667 0.00 0.00 0.00 4.44
3154 4758 5.022021 GCGAGAGATTTAATGGTGAAAACG 58.978 41.667 0.00 0.00 0.00 3.60
3155 4759 5.022021 CGCGAGAGATTTAATGGTGAAAAC 58.978 41.667 0.00 0.00 0.00 2.43
3156 4760 4.932799 TCGCGAGAGATTTAATGGTGAAAA 59.067 37.500 3.71 0.00 34.84 2.29
3157 4761 4.500127 TCGCGAGAGATTTAATGGTGAAA 58.500 39.130 3.71 0.00 34.84 2.69
3158 4762 4.118093 TCGCGAGAGATTTAATGGTGAA 57.882 40.909 3.71 0.00 34.84 3.18
3159 4763 3.793797 TCGCGAGAGATTTAATGGTGA 57.206 42.857 3.71 0.00 34.84 4.02
3160 4764 4.149571 CTCATCGCGAGAGATTTAATGGTG 59.850 45.833 22.93 9.77 45.45 4.17
3161 4765 4.038042 TCTCATCGCGAGAGATTTAATGGT 59.962 41.667 24.76 0.00 46.18 3.55
3162 4766 4.550422 TCTCATCGCGAGAGATTTAATGG 58.450 43.478 24.76 9.86 46.18 3.16
3173 4777 3.862267 AGTTTCAAAGATCTCATCGCGAG 59.138 43.478 16.66 7.11 43.80 5.03
3174 4778 3.849911 AGTTTCAAAGATCTCATCGCGA 58.150 40.909 13.09 13.09 0.00 5.87
3175 4779 5.037385 TCTAGTTTCAAAGATCTCATCGCG 58.963 41.667 0.00 0.00 0.00 5.87
3176 4780 7.104326 GATCTAGTTTCAAAGATCTCATCGC 57.896 40.000 0.00 0.00 43.14 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.