Multiple sequence alignment - TraesCS6B01G109800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G109800 chr6B 100.000 8956 0 0 1 8956 91215439 91206484 0.000000e+00 16539.0
1 TraesCS6B01G109800 chr6B 97.243 2865 67 9 3873 6734 716637428 716634573 0.000000e+00 4843.0
2 TraesCS6B01G109800 chr6B 85.335 2864 382 28 3874 6734 91017128 91014300 0.000000e+00 2928.0
3 TraesCS6B01G109800 chr6B 92.497 893 58 7 8070 8956 279204703 279203814 0.000000e+00 1269.0
4 TraesCS6B01G109800 chr6B 91.240 879 72 4 8070 8945 68262335 68261459 0.000000e+00 1192.0
5 TraesCS6B01G109800 chr6B 76.364 220 42 10 3240 3454 240399564 240399778 9.510000e-20 110.0
6 TraesCS6B01G109800 chr7B 97.106 2868 71 7 3869 6734 640470693 640467836 0.000000e+00 4826.0
7 TraesCS6B01G109800 chr7B 90.223 2864 265 9 3873 6734 568016708 568013858 0.000000e+00 3723.0
8 TraesCS6B01G109800 chr7B 88.963 2863 293 18 3874 6734 14111475 14108634 0.000000e+00 3515.0
9 TraesCS6B01G109800 chr7B 91.061 895 70 3 8067 8956 608922397 608923286 0.000000e+00 1201.0
10 TraesCS6B01G109800 chr7B 90.535 898 67 11 8070 8956 406699012 406699902 0.000000e+00 1171.0
11 TraesCS6B01G109800 chr1B 96.725 2870 83 8 3868 6734 614297684 614294823 0.000000e+00 4769.0
12 TraesCS6B01G109800 chr2B 95.739 2863 101 9 3874 6734 801047892 801045049 0.000000e+00 4591.0
13 TraesCS6B01G109800 chr3B 90.893 2866 246 10 3872 6734 819627917 819625064 0.000000e+00 3832.0
14 TraesCS6B01G109800 chr3B 91.406 896 68 2 8070 8956 154434622 154435517 0.000000e+00 1219.0
15 TraesCS6B01G109800 chr3B 90.513 896 70 12 8070 8956 819548313 819549202 0.000000e+00 1170.0
16 TraesCS6B01G109800 chr3B 90.089 898 73 10 8068 8956 334641038 334640148 0.000000e+00 1151.0
17 TraesCS6B01G109800 chr3B 86.592 716 92 2 1005 1716 790494661 790495376 0.000000e+00 787.0
18 TraesCS6B01G109800 chr3B 79.586 1112 206 15 6855 7957 790496625 790497724 0.000000e+00 776.0
19 TraesCS6B01G109800 chr3B 77.661 667 126 18 6970 7627 790616371 790615719 1.410000e-102 385.0
20 TraesCS6B01G109800 chr3B 83.817 241 18 15 3870 4109 606280630 606280410 9.110000e-50 209.0
21 TraesCS6B01G109800 chr4B 89.121 2868 285 21 3870 6734 139382425 139385268 0.000000e+00 3542.0
22 TraesCS6B01G109800 chr4B 76.101 636 130 18 1072 1702 671750143 671750761 6.750000e-81 313.0
23 TraesCS6B01G109800 chr4B 73.460 633 142 18 1076 1701 667572852 667572239 1.960000e-51 215.0
24 TraesCS6B01G109800 chr6D 91.833 2559 136 33 15 2554 39573983 39571479 0.000000e+00 3500.0
25 TraesCS6B01G109800 chr6D 93.755 1265 61 10 6812 8058 39569535 39568271 0.000000e+00 1882.0
26 TraesCS6B01G109800 chr6D 94.145 854 35 5 6814 7653 39682096 39682948 0.000000e+00 1286.0
27 TraesCS6B01G109800 chr6D 86.246 698 89 5 2994 3686 39570584 39569889 0.000000e+00 750.0
28 TraesCS6B01G109800 chr6D 89.041 438 38 7 2307 2740 39571121 39570690 1.320000e-147 534.0
29 TraesCS6B01G109800 chr6D 92.742 372 18 4 7693 8058 39683122 39683490 6.160000e-146 529.0
30 TraesCS6B01G109800 chr6D 87.629 194 21 3 2908 3099 39571323 39571131 1.170000e-53 222.0
31 TraesCS6B01G109800 chr6D 90.580 138 13 0 2610 2747 39571478 39571341 5.520000e-42 183.0
32 TraesCS6B01G109800 chr6D 82.353 119 7 5 3765 3869 39569668 39569550 3.440000e-14 91.6
33 TraesCS6B01G109800 chr6A 89.190 2063 126 43 15 2018 51442975 51440951 0.000000e+00 2484.0
34 TraesCS6B01G109800 chr6A 94.099 1254 52 11 6812 8046 51438542 51437292 0.000000e+00 1886.0
35 TraesCS6B01G109800 chr6A 91.286 723 50 10 2025 2740 51440819 51440103 0.000000e+00 974.0
36 TraesCS6B01G109800 chr6A 85.544 754 99 9 2939 3686 51440094 51439345 0.000000e+00 780.0
37 TraesCS6B01G109800 chr5B 89.690 902 75 8 8068 8956 228169532 228168636 0.000000e+00 1134.0
38 TraesCS6B01G109800 chr5B 89.798 892 82 5 8070 8956 456390628 456389741 0.000000e+00 1134.0
39 TraesCS6B01G109800 chr3A 80.935 1112 191 16 6855 7957 720857613 720858712 0.000000e+00 859.0
40 TraesCS6B01G109800 chr3A 86.486 703 90 3 1006 1704 720847197 720847898 0.000000e+00 767.0
41 TraesCS6B01G109800 chr3A 82.646 703 95 9 1005 1704 720841292 720841970 1.660000e-166 597.0
42 TraesCS6B01G109800 chr1D 72.526 586 143 16 1124 1703 415535 416108 3.320000e-39 174.0
43 TraesCS6B01G109800 chr7D 73.262 374 78 20 7564 7926 531976113 531975751 5.680000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G109800 chr6B 91206484 91215439 8955 True 16539.000000 16539 100.000000 1 8956 1 chr6B.!!$R3 8955
1 TraesCS6B01G109800 chr6B 716634573 716637428 2855 True 4843.000000 4843 97.243000 3873 6734 1 chr6B.!!$R5 2861
2 TraesCS6B01G109800 chr6B 91014300 91017128 2828 True 2928.000000 2928 85.335000 3874 6734 1 chr6B.!!$R2 2860
3 TraesCS6B01G109800 chr6B 279203814 279204703 889 True 1269.000000 1269 92.497000 8070 8956 1 chr6B.!!$R4 886
4 TraesCS6B01G109800 chr6B 68261459 68262335 876 True 1192.000000 1192 91.240000 8070 8945 1 chr6B.!!$R1 875
5 TraesCS6B01G109800 chr7B 640467836 640470693 2857 True 4826.000000 4826 97.106000 3869 6734 1 chr7B.!!$R3 2865
6 TraesCS6B01G109800 chr7B 568013858 568016708 2850 True 3723.000000 3723 90.223000 3873 6734 1 chr7B.!!$R2 2861
7 TraesCS6B01G109800 chr7B 14108634 14111475 2841 True 3515.000000 3515 88.963000 3874 6734 1 chr7B.!!$R1 2860
8 TraesCS6B01G109800 chr7B 608922397 608923286 889 False 1201.000000 1201 91.061000 8067 8956 1 chr7B.!!$F2 889
9 TraesCS6B01G109800 chr7B 406699012 406699902 890 False 1171.000000 1171 90.535000 8070 8956 1 chr7B.!!$F1 886
10 TraesCS6B01G109800 chr1B 614294823 614297684 2861 True 4769.000000 4769 96.725000 3868 6734 1 chr1B.!!$R1 2866
11 TraesCS6B01G109800 chr2B 801045049 801047892 2843 True 4591.000000 4591 95.739000 3874 6734 1 chr2B.!!$R1 2860
12 TraesCS6B01G109800 chr3B 819625064 819627917 2853 True 3832.000000 3832 90.893000 3872 6734 1 chr3B.!!$R4 2862
13 TraesCS6B01G109800 chr3B 154434622 154435517 895 False 1219.000000 1219 91.406000 8070 8956 1 chr3B.!!$F1 886
14 TraesCS6B01G109800 chr3B 819548313 819549202 889 False 1170.000000 1170 90.513000 8070 8956 1 chr3B.!!$F2 886
15 TraesCS6B01G109800 chr3B 334640148 334641038 890 True 1151.000000 1151 90.089000 8068 8956 1 chr3B.!!$R1 888
16 TraesCS6B01G109800 chr3B 790494661 790497724 3063 False 781.500000 787 83.089000 1005 7957 2 chr3B.!!$F3 6952
17 TraesCS6B01G109800 chr3B 790615719 790616371 652 True 385.000000 385 77.661000 6970 7627 1 chr3B.!!$R3 657
18 TraesCS6B01G109800 chr4B 139382425 139385268 2843 False 3542.000000 3542 89.121000 3870 6734 1 chr4B.!!$F1 2864
19 TraesCS6B01G109800 chr4B 671750143 671750761 618 False 313.000000 313 76.101000 1072 1702 1 chr4B.!!$F2 630
20 TraesCS6B01G109800 chr4B 667572239 667572852 613 True 215.000000 215 73.460000 1076 1701 1 chr4B.!!$R1 625
21 TraesCS6B01G109800 chr6D 39568271 39573983 5712 True 1023.228571 3500 88.776714 15 8058 7 chr6D.!!$R1 8043
22 TraesCS6B01G109800 chr6D 39682096 39683490 1394 False 907.500000 1286 93.443500 6814 8058 2 chr6D.!!$F1 1244
23 TraesCS6B01G109800 chr6A 51437292 51442975 5683 True 1531.000000 2484 90.029750 15 8046 4 chr6A.!!$R1 8031
24 TraesCS6B01G109800 chr5B 228168636 228169532 896 True 1134.000000 1134 89.690000 8068 8956 1 chr5B.!!$R1 888
25 TraesCS6B01G109800 chr5B 456389741 456390628 887 True 1134.000000 1134 89.798000 8070 8956 1 chr5B.!!$R2 886
26 TraesCS6B01G109800 chr3A 720857613 720858712 1099 False 859.000000 859 80.935000 6855 7957 1 chr3A.!!$F3 1102
27 TraesCS6B01G109800 chr3A 720847197 720847898 701 False 767.000000 767 86.486000 1006 1704 1 chr3A.!!$F2 698
28 TraesCS6B01G109800 chr3A 720841292 720841970 678 False 597.000000 597 82.646000 1005 1704 1 chr3A.!!$F1 699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
424 445 0.028505 GCAGCTACGCCACATGAATG 59.971 55.000 0.00 0.0 0.00 2.67 F
713 743 0.106521 TGCTTTGCTTTTCCTTGGCC 59.893 50.000 0.00 0.0 0.00 5.36 F
2098 3075 1.130054 AGGGCTGTGGCTCAAGAAGA 61.130 55.000 0.00 0.0 42.42 2.87 F
3396 5053 0.036388 TCATTCCCTTCGCAGGACAC 60.036 55.000 1.35 0.0 44.19 3.67 F
4144 6327 0.317160 CCCAGAGCGACAACACACTA 59.683 55.000 0.00 0.0 0.00 2.74 F
4307 6495 0.182299 GCAAGGAGGGCTTCAGCTAT 59.818 55.000 0.00 0.0 41.70 2.97 F
4480 6668 0.818040 AGGGAAACAGGAACACACGC 60.818 55.000 0.00 0.0 0.00 5.34 F
5712 7906 3.009253 TCTTATCAACCGGCAACCCTAAA 59.991 43.478 0.00 0.0 0.00 1.85 F
6896 9113 0.250338 AACCTCTGTTCAAGCGGTCC 60.250 55.000 0.00 0.0 43.48 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2256 3238 1.544724 ACACACAGCCTGTTTGTTGT 58.455 45.000 10.76 2.03 37.98 3.32 R
2622 3610 0.830444 TCACGTGGGCTCTACCTGTT 60.830 55.000 17.00 0.00 39.10 3.16 R
3890 6064 0.179097 GGAAATCGGAGAGAGCGCTT 60.179 55.000 13.26 0.58 43.63 4.68 R
4307 6495 0.631753 AGACTGGGAGGATCGAAGGA 59.368 55.000 0.00 0.00 34.37 3.36 R
5250 7442 1.358787 TGGCCAAACAGGGAGATTCAT 59.641 47.619 0.61 0.00 38.09 2.57 R
5556 7749 2.404559 CCCTTACAGGCATACCCTACA 58.595 52.381 0.00 0.00 44.09 2.74 R
6120 8316 2.426431 TGGAAACAGTTAGAGGGGGA 57.574 50.000 0.00 0.00 35.01 4.81 R
7466 9685 0.393944 TGAGGATGCCGTCGTAGAGT 60.394 55.000 0.00 0.00 36.95 3.24 R
8028 10421 1.053424 TCTAGCAGTTGGTCGGGTTT 58.947 50.000 0.00 0.00 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.360475 AGCTCTTCCTTTGCCGCC 60.360 61.111 0.00 0.00 0.00 6.13
34 35 2.672996 GCTCTTCCTTTGCCGCCA 60.673 61.111 0.00 0.00 0.00 5.69
53 54 2.075426 AACAGCTCGGCCACAAAAGC 62.075 55.000 2.24 3.09 34.95 3.51
55 56 1.529244 AGCTCGGCCACAAAAGCTT 60.529 52.632 2.24 0.00 42.23 3.74
56 57 1.081175 GCTCGGCCACAAAAGCTTC 60.081 57.895 2.24 0.00 0.00 3.86
60 62 0.934436 CGGCCACAAAAGCTTCAACG 60.934 55.000 2.24 0.00 0.00 4.10
68 70 2.642139 AAAGCTTCAACGCCATGATG 57.358 45.000 0.00 0.00 0.00 3.07
76 78 4.359971 TCAACGCCATGATGAAAAGATG 57.640 40.909 0.00 0.00 0.00 2.90
146 148 2.438434 CCAACACCCGCAGATCCC 60.438 66.667 0.00 0.00 0.00 3.85
164 170 1.203523 CCCGCAGCATAGAGTAGATCC 59.796 57.143 0.00 0.00 0.00 3.36
189 195 1.125093 ACCAATCCACCGAGACCACA 61.125 55.000 0.00 0.00 0.00 4.17
190 196 0.036164 CCAATCCACCGAGACCACAA 59.964 55.000 0.00 0.00 0.00 3.33
191 197 1.340017 CCAATCCACCGAGACCACAAT 60.340 52.381 0.00 0.00 0.00 2.71
222 230 2.605607 CCATCCAGCCACCACCAGA 61.606 63.158 0.00 0.00 0.00 3.86
269 277 0.037326 CACTTCAACTCCAGCCGCTA 60.037 55.000 0.00 0.00 0.00 4.26
295 304 3.460278 CACAAATTGCGTGCGCCG 61.460 61.111 14.16 9.69 41.09 6.46
322 333 4.641989 ACTTACTGCAATGGCCATCTAAAG 59.358 41.667 21.08 17.61 40.13 1.85
329 340 4.209538 CAATGGCCATCTAAAGATCCACA 58.790 43.478 21.08 0.00 33.12 4.17
330 341 3.281727 TGGCCATCTAAAGATCCACAC 57.718 47.619 0.00 0.00 31.21 3.82
331 342 2.213499 GGCCATCTAAAGATCCACACG 58.787 52.381 0.00 0.00 31.21 4.49
332 343 2.420129 GGCCATCTAAAGATCCACACGT 60.420 50.000 0.00 0.00 31.21 4.49
376 393 2.796193 CCAGCCGGTCGATGGATCA 61.796 63.158 1.90 0.00 36.09 2.92
381 398 1.270094 GCCGGTCGATGGATCATTACA 60.270 52.381 1.90 0.00 0.00 2.41
382 399 2.404215 CCGGTCGATGGATCATTACAC 58.596 52.381 0.00 0.00 0.00 2.90
383 400 2.223947 CCGGTCGATGGATCATTACACA 60.224 50.000 0.00 0.00 0.00 3.72
384 401 3.554960 CCGGTCGATGGATCATTACACAT 60.555 47.826 0.00 0.00 0.00 3.21
390 407 4.214758 CGATGGATCATTACACATGCATGT 59.785 41.667 26.61 26.61 42.84 3.21
423 444 0.392863 TGCAGCTACGCCACATGAAT 60.393 50.000 0.00 0.00 0.00 2.57
424 445 0.028505 GCAGCTACGCCACATGAATG 59.971 55.000 0.00 0.00 0.00 2.67
425 446 1.655484 CAGCTACGCCACATGAATGA 58.345 50.000 0.00 0.00 0.00 2.57
426 447 2.009051 CAGCTACGCCACATGAATGAA 58.991 47.619 0.00 0.00 0.00 2.57
427 448 2.031314 CAGCTACGCCACATGAATGAAG 59.969 50.000 0.00 0.00 0.00 3.02
547 573 1.171308 AACATGCCTTGCACTAGCTG 58.829 50.000 0.00 0.00 43.04 4.24
551 577 0.178992 TGCCTTGCACTAGCTGGTTT 60.179 50.000 0.00 0.00 42.74 3.27
552 578 0.961753 GCCTTGCACTAGCTGGTTTT 59.038 50.000 0.00 0.00 42.74 2.43
553 579 1.068264 GCCTTGCACTAGCTGGTTTTC 60.068 52.381 0.00 0.00 42.74 2.29
578 604 2.249337 TCGCATTGCACGCTAATTTTG 58.751 42.857 9.69 0.00 0.00 2.44
580 606 2.026742 CGCATTGCACGCTAATTTTGTC 59.973 45.455 9.69 0.00 0.00 3.18
582 608 3.181541 GCATTGCACGCTAATTTTGTCAC 60.182 43.478 3.15 0.00 0.00 3.67
585 611 2.096466 TGCACGCTAATTTTGTCACGAG 60.096 45.455 0.00 0.00 0.00 4.18
591 620 4.259451 CGCTAATTTTGTCACGAGACTAGC 60.259 45.833 14.15 15.31 45.20 3.42
592 621 4.865365 GCTAATTTTGTCACGAGACTAGCT 59.135 41.667 17.76 0.00 45.20 3.32
593 622 6.034591 GCTAATTTTGTCACGAGACTAGCTA 58.965 40.000 17.76 0.00 45.20 3.32
594 623 6.197468 GCTAATTTTGTCACGAGACTAGCTAG 59.803 42.308 19.44 19.44 45.20 3.42
612 641 8.681806 ACTAGCTAGTGCACTCATATATACATG 58.318 37.037 25.56 5.65 42.74 3.21
614 643 6.071165 AGCTAGTGCACTCATATATACATGCA 60.071 38.462 25.56 11.10 42.74 3.96
713 743 0.106521 TGCTTTGCTTTTCCTTGGCC 59.893 50.000 0.00 0.00 0.00 5.36
716 746 1.140652 CTTTGCTTTTCCTTGGCCCAA 59.859 47.619 0.00 0.00 0.00 4.12
722 752 2.003937 TTTCCTTGGCCCAAGTTACC 57.996 50.000 21.65 0.00 39.58 2.85
723 753 1.154430 TTCCTTGGCCCAAGTTACCT 58.846 50.000 21.65 0.00 39.58 3.08
724 754 1.154430 TCCTTGGCCCAAGTTACCTT 58.846 50.000 21.65 0.00 39.58 3.50
725 755 2.350419 TCCTTGGCCCAAGTTACCTTA 58.650 47.619 21.65 0.00 39.58 2.69
726 756 2.307686 TCCTTGGCCCAAGTTACCTTAG 59.692 50.000 21.65 4.40 39.58 2.18
803 833 7.148356 TGTGCTCAACTGCTGAAATAGAATAAG 60.148 37.037 0.00 0.00 32.17 1.73
807 837 9.160496 CTCAACTGCTGAAATAGAATAAGAACT 57.840 33.333 0.00 0.00 32.17 3.01
828 858 4.780021 ACTCAACTGTCCATATGGTTCTCT 59.220 41.667 21.28 2.41 36.34 3.10
845 875 7.551585 TGGTTCTCTATCTCATTTCTTCACTC 58.448 38.462 0.00 0.00 0.00 3.51
852 882 6.959671 ATCTCATTTCTTCACTCGAACTTC 57.040 37.500 0.00 0.00 0.00 3.01
900 930 3.432252 ACGAATGAAAGTAGCAAACTCGG 59.568 43.478 0.00 0.00 37.50 4.63
911 943 6.157211 AGTAGCAAACTCGGTGCATATATAC 58.843 40.000 0.00 0.00 44.74 1.47
972 1004 2.620251 GTGGTCATATAGCAGCCACA 57.380 50.000 7.09 0.00 46.29 4.17
999 1031 1.456923 GTTAGCCACACGTAAACCGAC 59.543 52.381 0.00 0.00 40.70 4.79
1045 1083 2.060980 CCGGTCCTCCTCCTCCTTG 61.061 68.421 0.00 0.00 0.00 3.61
1053 1091 2.962421 CCTCCTCCTCCTTGTGATACTC 59.038 54.545 0.00 0.00 0.00 2.59
1404 1445 2.125326 CAGGGCGGAGATCACGGTA 61.125 63.158 11.07 0.00 0.00 4.02
1739 1780 6.128282 CCCTTTGTTGTACACACTATGATGAC 60.128 42.308 0.00 0.00 33.98 3.06
1740 1781 6.426633 CCTTTGTTGTACACACTATGATGACA 59.573 38.462 0.00 0.00 33.98 3.58
1741 1782 6.779115 TTGTTGTACACACTATGATGACAC 57.221 37.500 0.00 0.00 33.98 3.67
1743 1784 4.776795 TGTACACACTATGATGACACGT 57.223 40.909 0.00 0.00 0.00 4.49
1744 1785 4.481463 TGTACACACTATGATGACACGTG 58.519 43.478 15.48 15.48 37.06 4.49
1745 1786 3.660501 ACACACTATGATGACACGTGT 57.339 42.857 23.64 23.64 41.37 4.49
1956 2296 6.487668 TGGTAGATAAGTATTGCGTGCTAGTA 59.512 38.462 0.00 0.00 0.00 1.82
1977 2317 3.221771 ACTTAGCAAGTGAACCATGCAA 58.778 40.909 10.37 3.89 42.45 4.08
2003 2855 6.494893 ACGTACTTGATGCAACATTTATGT 57.505 33.333 0.00 1.40 44.20 2.29
2060 3037 5.163923 CGATGAATACGTATGTAGTAGGCGA 60.164 44.000 9.24 0.00 33.17 5.54
2098 3075 1.130054 AGGGCTGTGGCTCAAGAAGA 61.130 55.000 0.00 0.00 42.42 2.87
2107 3084 1.615384 GGCTCAAGAAGAAGGCACCAT 60.615 52.381 0.00 0.00 0.00 3.55
2129 3106 3.952323 TCGGTGGAAGATACTTGGAGTAG 59.048 47.826 0.00 0.00 33.66 2.57
2138 3115 8.041323 GGAAGATACTTGGAGTAGAAAACATGA 58.959 37.037 0.00 0.00 33.66 3.07
2141 3118 9.965902 AGATACTTGGAGTAGAAAACATGATTT 57.034 29.630 0.00 0.00 33.66 2.17
2171 3148 1.290955 CAAACATGCAGCCCACAGG 59.709 57.895 0.00 0.00 0.00 4.00
2202 3183 3.314913 TGTGTCGCAATCATGTCACTTTT 59.685 39.130 0.00 0.00 0.00 2.27
2203 3184 3.665409 GTGTCGCAATCATGTCACTTTTG 59.335 43.478 0.00 0.00 0.00 2.44
2256 3238 6.876610 AAGGACACCTTTGGAACAAGGTAGA 61.877 44.000 4.80 0.00 41.69 2.59
2257 3239 8.820403 AAGGACACCTTTGGAACAAGGTAGAC 62.820 46.154 4.80 0.00 41.69 2.59
2269 3251 3.214328 CAAGGTAGACAACAAACAGGCT 58.786 45.455 0.00 0.00 0.00 4.58
2355 3337 2.310233 CGACCGACACTTGCACCTG 61.310 63.158 0.00 0.00 0.00 4.00
2372 3354 5.186215 TGCACCTGAATGTCAAATGATTCAT 59.814 36.000 0.00 0.00 37.81 2.57
2470 3456 8.085296 CCCCTCTATATGCTATTTGTCGATATC 58.915 40.741 0.00 0.00 0.00 1.63
2492 3478 5.305585 TCTTGTCGCAAAGTTTAGGAGAAT 58.694 37.500 0.00 0.00 0.00 2.40
2594 3582 8.970691 ACACTTGTGTTAATTCTAATGCAATC 57.029 30.769 0.00 0.00 0.00 2.67
2595 3583 8.796475 ACACTTGTGTTAATTCTAATGCAATCT 58.204 29.630 0.00 0.00 0.00 2.40
2622 3610 4.522114 TCGATCAATTCATGGCCAAACTA 58.478 39.130 10.96 0.00 0.00 2.24
2657 3645 3.490896 CACGTGAACGCTAATATGATGCT 59.509 43.478 10.90 0.00 44.43 3.79
2665 3653 3.672808 GCTAATATGATGCTGAGGTGCT 58.327 45.455 0.00 0.00 0.00 4.40
2687 3675 3.573673 TGGACACATGCTCCACCA 58.426 55.556 8.37 1.87 32.52 4.17
2745 3733 5.906772 TCCTCCCATTTCTATCTTTACCC 57.093 43.478 0.00 0.00 0.00 3.69
2746 3734 5.548573 TCCTCCCATTTCTATCTTTACCCT 58.451 41.667 0.00 0.00 0.00 4.34
2747 3735 5.976870 TCCTCCCATTTCTATCTTTACCCTT 59.023 40.000 0.00 0.00 0.00 3.95
2748 3736 6.064717 CCTCCCATTTCTATCTTTACCCTTG 58.935 44.000 0.00 0.00 0.00 3.61
2749 3737 6.353951 CCTCCCATTTCTATCTTTACCCTTGT 60.354 42.308 0.00 0.00 0.00 3.16
2750 3738 6.659824 TCCCATTTCTATCTTTACCCTTGTC 58.340 40.000 0.00 0.00 0.00 3.18
2751 3739 5.527582 CCCATTTCTATCTTTACCCTTGTCG 59.472 44.000 0.00 0.00 0.00 4.35
2752 3740 5.007724 CCATTTCTATCTTTACCCTTGTCGC 59.992 44.000 0.00 0.00 0.00 5.19
2753 3741 3.814005 TCTATCTTTACCCTTGTCGCC 57.186 47.619 0.00 0.00 0.00 5.54
2754 3742 2.433239 TCTATCTTTACCCTTGTCGCCC 59.567 50.000 0.00 0.00 0.00 6.13
2755 3743 1.286248 ATCTTTACCCTTGTCGCCCT 58.714 50.000 0.00 0.00 0.00 5.19
2756 3744 1.941377 TCTTTACCCTTGTCGCCCTA 58.059 50.000 0.00 0.00 0.00 3.53
2757 3745 2.474112 TCTTTACCCTTGTCGCCCTAT 58.526 47.619 0.00 0.00 0.00 2.57
2758 3746 2.841881 TCTTTACCCTTGTCGCCCTATT 59.158 45.455 0.00 0.00 0.00 1.73
2759 3747 2.702592 TTACCCTTGTCGCCCTATTG 57.297 50.000 0.00 0.00 0.00 1.90
2760 3748 1.575419 TACCCTTGTCGCCCTATTGT 58.425 50.000 0.00 0.00 0.00 2.71
2761 3749 0.252197 ACCCTTGTCGCCCTATTGTC 59.748 55.000 0.00 0.00 0.00 3.18
2762 3750 0.541863 CCCTTGTCGCCCTATTGTCT 59.458 55.000 0.00 0.00 0.00 3.41
2763 3751 1.760613 CCCTTGTCGCCCTATTGTCTA 59.239 52.381 0.00 0.00 0.00 2.59
2764 3752 2.169769 CCCTTGTCGCCCTATTGTCTAA 59.830 50.000 0.00 0.00 0.00 2.10
2765 3753 3.370103 CCCTTGTCGCCCTATTGTCTAAA 60.370 47.826 0.00 0.00 0.00 1.85
2766 3754 4.258543 CCTTGTCGCCCTATTGTCTAAAA 58.741 43.478 0.00 0.00 0.00 1.52
2767 3755 4.881850 CCTTGTCGCCCTATTGTCTAAAAT 59.118 41.667 0.00 0.00 0.00 1.82
2768 3756 6.053005 CCTTGTCGCCCTATTGTCTAAAATA 58.947 40.000 0.00 0.00 0.00 1.40
2769 3757 6.540914 CCTTGTCGCCCTATTGTCTAAAATAA 59.459 38.462 0.00 0.00 0.00 1.40
2770 3758 7.254795 CCTTGTCGCCCTATTGTCTAAAATAAG 60.255 40.741 0.00 0.00 0.00 1.73
2771 3759 6.880484 TGTCGCCCTATTGTCTAAAATAAGA 58.120 36.000 0.00 0.00 0.00 2.10
2772 3760 7.506114 TGTCGCCCTATTGTCTAAAATAAGAT 58.494 34.615 0.00 0.00 0.00 2.40
2773 3761 7.441157 TGTCGCCCTATTGTCTAAAATAAGATG 59.559 37.037 0.00 0.00 0.00 2.90
2774 3762 6.934645 TCGCCCTATTGTCTAAAATAAGATGG 59.065 38.462 0.00 0.00 0.00 3.51
2775 3763 6.934645 CGCCCTATTGTCTAAAATAAGATGGA 59.065 38.462 0.00 0.00 0.00 3.41
2776 3764 7.118390 CGCCCTATTGTCTAAAATAAGATGGAG 59.882 40.741 0.00 0.00 0.00 3.86
2777 3765 7.094592 GCCCTATTGTCTAAAATAAGATGGAGC 60.095 40.741 0.00 0.00 0.00 4.70
2778 3766 8.160106 CCCTATTGTCTAAAATAAGATGGAGCT 58.840 37.037 0.00 0.00 0.00 4.09
2787 3775 9.660180 CTAAAATAAGATGGAGCTATCTAACCC 57.340 37.037 0.00 0.00 36.42 4.11
2788 3776 7.633018 AAATAAGATGGAGCTATCTAACCCA 57.367 36.000 0.00 0.00 36.42 4.51
2789 3777 4.965200 AAGATGGAGCTATCTAACCCAC 57.035 45.455 0.00 0.00 36.42 4.61
2790 3778 3.243724 AGATGGAGCTATCTAACCCACC 58.756 50.000 0.00 0.00 35.70 4.61
2791 3779 1.802553 TGGAGCTATCTAACCCACCC 58.197 55.000 0.00 0.00 0.00 4.61
2792 3780 1.009060 TGGAGCTATCTAACCCACCCA 59.991 52.381 0.00 0.00 0.00 4.51
2793 3781 1.694696 GGAGCTATCTAACCCACCCAG 59.305 57.143 0.00 0.00 0.00 4.45
2794 3782 2.679082 GAGCTATCTAACCCACCCAGA 58.321 52.381 0.00 0.00 0.00 3.86
2795 3783 3.243724 GAGCTATCTAACCCACCCAGAT 58.756 50.000 0.00 0.00 33.66 2.90
2796 3784 3.648545 GAGCTATCTAACCCACCCAGATT 59.351 47.826 0.00 0.00 31.60 2.40
2797 3785 4.047883 AGCTATCTAACCCACCCAGATTT 58.952 43.478 0.00 0.00 31.60 2.17
2798 3786 4.103311 AGCTATCTAACCCACCCAGATTTC 59.897 45.833 0.00 0.00 31.60 2.17
2799 3787 3.560636 ATCTAACCCACCCAGATTTCG 57.439 47.619 0.00 0.00 0.00 3.46
2800 3788 2.542550 TCTAACCCACCCAGATTTCGA 58.457 47.619 0.00 0.00 0.00 3.71
2801 3789 2.500098 TCTAACCCACCCAGATTTCGAG 59.500 50.000 0.00 0.00 0.00 4.04
2802 3790 1.064825 AACCCACCCAGATTTCGAGT 58.935 50.000 0.00 0.00 0.00 4.18
2803 3791 0.613777 ACCCACCCAGATTTCGAGTC 59.386 55.000 0.00 0.00 0.00 3.36
2804 3792 0.613260 CCCACCCAGATTTCGAGTCA 59.387 55.000 3.21 0.00 0.00 3.41
2805 3793 1.676014 CCCACCCAGATTTCGAGTCAC 60.676 57.143 3.21 0.00 0.00 3.67
2806 3794 1.001974 CCACCCAGATTTCGAGTCACA 59.998 52.381 3.21 0.00 0.00 3.58
2807 3795 2.341257 CACCCAGATTTCGAGTCACAG 58.659 52.381 3.21 0.00 0.00 3.66
2808 3796 2.029020 CACCCAGATTTCGAGTCACAGA 60.029 50.000 3.21 0.00 0.00 3.41
2809 3797 2.232452 ACCCAGATTTCGAGTCACAGAG 59.768 50.000 3.21 0.00 0.00 3.35
2810 3798 2.232452 CCCAGATTTCGAGTCACAGAGT 59.768 50.000 3.21 0.00 0.00 3.24
2811 3799 3.444034 CCCAGATTTCGAGTCACAGAGTA 59.556 47.826 3.21 0.00 0.00 2.59
2812 3800 4.082190 CCCAGATTTCGAGTCACAGAGTAA 60.082 45.833 3.21 0.00 0.00 2.24
2813 3801 5.394663 CCCAGATTTCGAGTCACAGAGTAAT 60.395 44.000 3.21 0.00 0.00 1.89
2814 3802 6.102663 CCAGATTTCGAGTCACAGAGTAATT 58.897 40.000 3.21 0.00 0.00 1.40
2815 3803 6.035435 CCAGATTTCGAGTCACAGAGTAATTG 59.965 42.308 3.21 0.00 0.00 2.32
2816 3804 6.587990 CAGATTTCGAGTCACAGAGTAATTGT 59.412 38.462 3.21 0.00 0.00 2.71
2817 3805 6.587990 AGATTTCGAGTCACAGAGTAATTGTG 59.412 38.462 0.00 0.00 45.61 3.33
2818 3806 4.174411 TCGAGTCACAGAGTAATTGTGG 57.826 45.455 5.64 0.00 44.63 4.17
2819 3807 3.572682 TCGAGTCACAGAGTAATTGTGGT 59.427 43.478 5.64 0.00 44.63 4.16
2820 3808 3.675225 CGAGTCACAGAGTAATTGTGGTG 59.325 47.826 5.64 0.00 44.63 4.17
2821 3809 3.403038 AGTCACAGAGTAATTGTGGTGC 58.597 45.455 5.64 0.00 44.63 5.01
2822 3810 3.071602 AGTCACAGAGTAATTGTGGTGCT 59.928 43.478 5.64 0.52 44.63 4.40
2823 3811 3.815401 GTCACAGAGTAATTGTGGTGCTT 59.185 43.478 5.64 0.00 44.63 3.91
2824 3812 4.994852 GTCACAGAGTAATTGTGGTGCTTA 59.005 41.667 5.64 0.00 44.63 3.09
2825 3813 5.120830 GTCACAGAGTAATTGTGGTGCTTAG 59.879 44.000 5.64 0.00 44.63 2.18
2826 3814 5.011635 TCACAGAGTAATTGTGGTGCTTAGA 59.988 40.000 5.64 0.00 44.63 2.10
2827 3815 5.349817 CACAGAGTAATTGTGGTGCTTAGAG 59.650 44.000 0.00 0.00 41.66 2.43
2828 3816 5.012148 ACAGAGTAATTGTGGTGCTTAGAGT 59.988 40.000 0.00 0.00 0.00 3.24
2829 3817 5.934625 CAGAGTAATTGTGGTGCTTAGAGTT 59.065 40.000 0.00 0.00 0.00 3.01
2830 3818 6.428159 CAGAGTAATTGTGGTGCTTAGAGTTT 59.572 38.462 0.00 0.00 0.00 2.66
2831 3819 6.651225 AGAGTAATTGTGGTGCTTAGAGTTTC 59.349 38.462 0.00 0.00 0.00 2.78
2832 3820 6.534634 AGTAATTGTGGTGCTTAGAGTTTCT 58.465 36.000 0.00 0.00 0.00 2.52
2833 3821 5.948992 AATTGTGGTGCTTAGAGTTTCTC 57.051 39.130 0.00 0.00 0.00 2.87
2834 3822 3.402628 TGTGGTGCTTAGAGTTTCTCC 57.597 47.619 0.00 0.00 0.00 3.71
2835 3823 2.972713 TGTGGTGCTTAGAGTTTCTCCT 59.027 45.455 0.00 0.00 0.00 3.69
2836 3824 4.157246 TGTGGTGCTTAGAGTTTCTCCTA 58.843 43.478 0.00 0.00 0.00 2.94
2837 3825 4.777896 TGTGGTGCTTAGAGTTTCTCCTAT 59.222 41.667 0.00 0.00 0.00 2.57
2838 3826 5.248477 TGTGGTGCTTAGAGTTTCTCCTATT 59.752 40.000 0.00 0.00 0.00 1.73
2839 3827 6.439375 TGTGGTGCTTAGAGTTTCTCCTATTA 59.561 38.462 0.00 0.00 0.00 0.98
2840 3828 7.038587 TGTGGTGCTTAGAGTTTCTCCTATTAA 60.039 37.037 0.00 0.00 0.00 1.40
2841 3829 7.822822 GTGGTGCTTAGAGTTTCTCCTATTAAA 59.177 37.037 0.00 0.00 0.00 1.52
2842 3830 8.380099 TGGTGCTTAGAGTTTCTCCTATTAAAA 58.620 33.333 0.00 0.00 0.00 1.52
2843 3831 9.397280 GGTGCTTAGAGTTTCTCCTATTAAAAT 57.603 33.333 0.00 0.00 0.00 1.82
2865 3853 7.814693 AATATATATGTGTCCAAGGGCTAGT 57.185 36.000 0.00 0.00 0.00 2.57
2866 3854 5.746990 ATATATGTGTCCAAGGGCTAGTC 57.253 43.478 0.00 0.00 0.00 2.59
2867 3855 0.912486 ATGTGTCCAAGGGCTAGTCC 59.088 55.000 4.79 4.79 0.00 3.85
2868 3856 0.472925 TGTGTCCAAGGGCTAGTCCA 60.473 55.000 17.52 0.00 36.21 4.02
2869 3857 0.250513 GTGTCCAAGGGCTAGTCCAG 59.749 60.000 17.52 7.55 36.21 3.86
2870 3858 0.909610 TGTCCAAGGGCTAGTCCAGG 60.910 60.000 17.52 16.97 36.21 4.45
2871 3859 0.617820 GTCCAAGGGCTAGTCCAGGA 60.618 60.000 20.19 20.19 36.21 3.86
2872 3860 0.343372 TCCAAGGGCTAGTCCAGGAT 59.657 55.000 20.19 0.00 36.21 3.24
2873 3861 0.471617 CCAAGGGCTAGTCCAGGATG 59.528 60.000 17.52 8.70 36.21 3.51
2874 3862 1.207791 CAAGGGCTAGTCCAGGATGT 58.792 55.000 17.52 0.00 36.21 3.06
2875 3863 1.561542 CAAGGGCTAGTCCAGGATGTT 59.438 52.381 17.52 0.00 36.21 2.71
2876 3864 1.501582 AGGGCTAGTCCAGGATGTTC 58.498 55.000 17.52 0.00 36.21 3.18
2877 3865 1.008938 AGGGCTAGTCCAGGATGTTCT 59.991 52.381 17.52 0.00 36.21 3.01
2878 3866 1.414550 GGGCTAGTCCAGGATGTTCTC 59.585 57.143 9.01 0.00 36.21 2.87
2879 3867 1.067821 GGCTAGTCCAGGATGTTCTCG 59.932 57.143 0.00 0.00 34.01 4.04
2880 3868 1.751924 GCTAGTCCAGGATGTTCTCGT 59.248 52.381 0.00 0.00 0.00 4.18
2881 3869 2.166664 GCTAGTCCAGGATGTTCTCGTT 59.833 50.000 0.00 0.00 0.00 3.85
2882 3870 3.368531 GCTAGTCCAGGATGTTCTCGTTT 60.369 47.826 0.00 0.00 0.00 3.60
2883 3871 3.771577 AGTCCAGGATGTTCTCGTTTT 57.228 42.857 0.00 0.00 0.00 2.43
2884 3872 4.086706 AGTCCAGGATGTTCTCGTTTTT 57.913 40.909 0.00 0.00 0.00 1.94
2910 3898 1.145571 ATCTCTACCCTCGCCTCTCT 58.854 55.000 0.00 0.00 0.00 3.10
2915 3903 0.470766 TACCCTCGCCTCTCTCTCTC 59.529 60.000 0.00 0.00 0.00 3.20
2918 3906 0.469917 CCTCGCCTCTCTCTCTCTCT 59.530 60.000 0.00 0.00 0.00 3.10
2923 3911 2.546795 CGCCTCTCTCTCTCTCTCTCTC 60.547 59.091 0.00 0.00 0.00 3.20
2926 3914 3.963374 CCTCTCTCTCTCTCTCTCTCTCA 59.037 52.174 0.00 0.00 0.00 3.27
2927 3915 4.592351 CCTCTCTCTCTCTCTCTCTCTCAT 59.408 50.000 0.00 0.00 0.00 2.90
2928 3916 5.279406 CCTCTCTCTCTCTCTCTCTCTCATC 60.279 52.000 0.00 0.00 0.00 2.92
2929 3917 5.211201 TCTCTCTCTCTCTCTCTCTCATCA 58.789 45.833 0.00 0.00 0.00 3.07
2930 3918 5.662657 TCTCTCTCTCTCTCTCTCTCATCAA 59.337 44.000 0.00 0.00 0.00 2.57
2932 3920 5.189539 TCTCTCTCTCTCTCTCTCATCAACA 59.810 44.000 0.00 0.00 0.00 3.33
2934 3922 4.269183 TCTCTCTCTCTCTCATCAACACC 58.731 47.826 0.00 0.00 0.00 4.16
2935 3923 3.013219 TCTCTCTCTCTCATCAACACCG 58.987 50.000 0.00 0.00 0.00 4.94
2938 3926 2.752354 CTCTCTCTCATCAACACCGACT 59.248 50.000 0.00 0.00 0.00 4.18
2939 3927 3.942115 CTCTCTCTCATCAACACCGACTA 59.058 47.826 0.00 0.00 0.00 2.59
2940 3928 4.527944 TCTCTCTCATCAACACCGACTAT 58.472 43.478 0.00 0.00 0.00 2.12
2942 3930 4.017126 TCTCTCATCAACACCGACTATGT 58.983 43.478 0.00 0.00 0.00 2.29
2967 3966 0.252103 TCGTAGAAAGGGCAGAGGGT 60.252 55.000 0.00 0.00 0.00 4.34
3070 4072 1.831736 CTTCCTTCTACATCCACCGGT 59.168 52.381 0.00 0.00 0.00 5.28
3071 4073 1.191535 TCCTTCTACATCCACCGGTG 58.808 55.000 28.26 28.26 0.00 4.94
3091 4746 2.127118 CCGTTGCGAGCAAAGCTG 60.127 61.111 12.41 3.30 39.88 4.24
3098 4753 2.669569 GAGCAAAGCTGGTCGCCA 60.670 61.111 0.00 0.00 39.88 5.69
3142 4797 3.703556 TGAGCAACCTTGTTGAAATCCAA 59.296 39.130 10.94 0.00 0.00 3.53
3161 4816 5.300752 TCCAACAGCTTCTAGAAAGAACAG 58.699 41.667 6.63 0.00 36.80 3.16
3162 4817 5.059833 CCAACAGCTTCTAGAAAGAACAGT 58.940 41.667 6.63 0.00 36.80 3.55
3163 4818 5.529060 CCAACAGCTTCTAGAAAGAACAGTT 59.471 40.000 6.63 3.61 36.80 3.16
3167 4822 4.103311 AGCTTCTAGAAAGAACAGTTGGGT 59.897 41.667 6.63 0.00 36.80 4.51
3172 4827 5.836898 TCTAGAAAGAACAGTTGGGTAGTCA 59.163 40.000 0.00 0.00 0.00 3.41
3175 4830 4.974645 AAGAACAGTTGGGTAGTCATCA 57.025 40.909 0.00 0.00 0.00 3.07
3176 4831 5.505181 AAGAACAGTTGGGTAGTCATCAT 57.495 39.130 0.00 0.00 0.00 2.45
3221 4876 4.084849 CGTGAAATGGATAGATCGCAACTC 60.085 45.833 0.00 0.00 0.00 3.01
3224 4879 4.944619 AATGGATAGATCGCAACTCAGA 57.055 40.909 0.00 0.00 0.00 3.27
3229 4884 5.105351 TGGATAGATCGCAACTCAGAAGAAA 60.105 40.000 0.00 0.00 0.00 2.52
3250 4905 1.204941 CCGACACTAAGAAGGACCAGG 59.795 57.143 0.00 0.00 0.00 4.45
3255 4910 5.202004 GACACTAAGAAGGACCAGGAGATA 58.798 45.833 0.00 0.00 0.00 1.98
3266 4921 4.039852 GGACCAGGAGATAATCTCAACTCC 59.960 50.000 0.00 0.00 45.12 3.85
3277 4934 1.694150 TCTCAACTCCAACCAGACAGG 59.306 52.381 0.00 0.00 45.67 4.00
3381 5038 5.237815 ACAGACACATATCACAACGTCATT 58.762 37.500 0.00 0.00 0.00 2.57
3396 5053 0.036388 TCATTCCCTTCGCAGGACAC 60.036 55.000 1.35 0.00 44.19 3.67
3422 5080 5.323900 CGTCATGAACAAACGCTAATCATT 58.676 37.500 0.00 0.00 0.00 2.57
3423 5081 5.794945 CGTCATGAACAAACGCTAATCATTT 59.205 36.000 0.00 0.00 0.00 2.32
3436 5094 4.024809 GCTAATCATTTTAGACCGAGTGCC 60.025 45.833 0.00 0.00 0.00 5.01
3438 5096 3.247006 TCATTTTAGACCGAGTGCCTC 57.753 47.619 0.00 0.00 0.00 4.70
3456 5114 2.113807 CTCAGATCACACCATCCTCCA 58.886 52.381 0.00 0.00 0.00 3.86
3466 5124 0.747255 CCATCCTCCAACTCGTCGAT 59.253 55.000 0.00 0.00 0.00 3.59
3474 5132 1.269166 CAACTCGTCGATGCCACTAC 58.731 55.000 0.00 0.00 0.00 2.73
3488 5146 3.010420 GCCACTACAATGAAGGACTTCC 58.990 50.000 9.39 0.00 38.77 3.46
3502 5160 1.771255 GACTTCCACATGGGGATAGCT 59.229 52.381 19.80 8.81 36.67 3.32
3511 5169 1.048724 TGGGGATAGCTGAGGAACCG 61.049 60.000 0.00 0.00 0.00 4.44
3530 5188 3.756434 ACCGTTATTCCAATTGTCACCAG 59.244 43.478 4.43 0.00 0.00 4.00
3553 5211 2.943036 ACCAACTTTACCGGTGATGT 57.057 45.000 19.93 15.12 0.00 3.06
3564 5222 4.196626 ACCGGTGATGTAGAATTCGAAA 57.803 40.909 6.12 0.00 0.00 3.46
3567 5225 4.630069 CCGGTGATGTAGAATTCGAAAACT 59.370 41.667 0.00 7.31 0.00 2.66
3580 5238 9.774742 AGAATTCGAAAACTCTACAAAATATGC 57.225 29.630 0.00 0.00 0.00 3.14
3597 5256 2.105128 CATCGGACTGGTCGAGGC 59.895 66.667 0.00 0.00 40.09 4.70
3613 5272 3.124921 GCGAAAAGCTAGCCGCCA 61.125 61.111 20.94 0.00 44.04 5.69
3628 5287 2.539081 GCCACTTGGTCCCCTCCTT 61.539 63.158 0.00 0.00 37.57 3.36
3718 5401 4.202050 GCAAGTTGTGAGATCAACCAAGTT 60.202 41.667 4.48 0.85 45.90 2.66
3726 5409 6.375736 TGTGAGATCAACCAAGTTAACACAAA 59.624 34.615 8.61 0.00 32.90 2.83
3762 5445 5.293569 CACACGTAGGGAATTTCCTATCAAC 59.706 44.000 15.89 4.60 41.03 3.18
3764 5447 6.381994 ACACGTAGGGAATTTCCTATCAACTA 59.618 38.462 15.89 4.40 41.03 2.24
3765 5448 7.070821 ACACGTAGGGAATTTCCTATCAACTAT 59.929 37.037 15.89 0.00 41.03 2.12
3766 5449 8.582437 CACGTAGGGAATTTCCTATCAACTATA 58.418 37.037 15.89 0.00 41.03 1.31
3819 5980 6.795098 ACTATTAGTTTCGAAATGTGCACA 57.205 33.333 24.08 24.08 0.00 4.57
3838 6012 3.246226 CACATAAATCTGTGCGTAGGAGC 59.754 47.826 0.00 0.00 40.03 4.70
3849 6023 1.512926 CGTAGGAGCAAGTGCAGTTT 58.487 50.000 3.38 0.00 45.16 2.66
3865 6039 3.187432 GCAGTTTTACAGCTTCAGACCTC 59.813 47.826 0.00 0.00 0.00 3.85
4144 6327 0.317160 CCCAGAGCGACAACACACTA 59.683 55.000 0.00 0.00 0.00 2.74
4175 6358 2.339769 ACAGAGGCTACAAGGGAAACT 58.660 47.619 0.00 0.00 0.00 2.66
4307 6495 0.182299 GCAAGGAGGGCTTCAGCTAT 59.818 55.000 0.00 0.00 41.70 2.97
4478 6666 2.052782 ACAGGGAAACAGGAACACAC 57.947 50.000 0.00 0.00 0.00 3.82
4480 6668 0.818040 AGGGAAACAGGAACACACGC 60.818 55.000 0.00 0.00 0.00 5.34
4933 7122 9.668497 AACAGTATAAACTCCCTTCTTATCAAC 57.332 33.333 0.00 0.00 31.97 3.18
5290 7482 3.065095 CCAAAACATTGCCCACACTTTTG 59.935 43.478 0.00 0.00 31.09 2.44
5485 7677 4.511527 TCTTCTGATCATCTTCTTGCCAC 58.488 43.478 0.00 0.00 0.00 5.01
5556 7749 5.045286 GGAGCCCATAGAAGGACATCATAAT 60.045 44.000 0.00 0.00 0.00 1.28
5712 7906 3.009253 TCTTATCAACCGGCAACCCTAAA 59.991 43.478 0.00 0.00 0.00 1.85
5798 7992 3.735237 TGCCGCACCAAATAAGAAAAA 57.265 38.095 0.00 0.00 0.00 1.94
6120 8316 8.062065 TCTCATTAACCTTGACACAAACTTTT 57.938 30.769 0.00 0.00 0.00 2.27
6241 8437 6.544038 AGGCCTTTTCAAAATCAATTTTCG 57.456 33.333 0.00 0.00 37.86 3.46
6302 8498 1.562942 AGCCTCATGCAAGATCAGGAA 59.437 47.619 0.00 0.00 44.83 3.36
6609 8805 2.825836 GCCGTGAAGCCATCTGGG 60.826 66.667 0.00 0.00 40.85 4.45
6786 8983 7.913674 TTTTTGTGCAAGGTCTAACATTTTT 57.086 28.000 0.00 0.00 0.00 1.94
6813 9010 5.606348 TTTTTGTGCAAGGTCTACCAAAT 57.394 34.783 1.26 0.00 38.89 2.32
6814 9011 5.606348 TTTTGTGCAAGGTCTACCAAATT 57.394 34.783 1.26 0.00 38.89 1.82
6815 9012 5.606348 TTTGTGCAAGGTCTACCAAATTT 57.394 34.783 1.26 0.00 38.89 1.82
6816 9013 4.846779 TGTGCAAGGTCTACCAAATTTC 57.153 40.909 1.26 0.00 38.89 2.17
6817 9014 3.572255 TGTGCAAGGTCTACCAAATTTCC 59.428 43.478 1.26 0.00 38.89 3.13
6818 9015 3.056821 GTGCAAGGTCTACCAAATTTCCC 60.057 47.826 1.26 0.00 38.89 3.97
6896 9113 0.250338 AACCTCTGTTCAAGCGGTCC 60.250 55.000 0.00 0.00 43.48 4.46
6950 9167 0.535102 CGGAGCAGGTGACCAAGTTT 60.535 55.000 3.63 0.00 0.00 2.66
6980 9197 3.607987 GAGTTCGCCGACATCGCG 61.608 66.667 0.00 0.00 39.11 5.87
7312 9531 0.900647 CTGACTGGGAAGGAGGACGT 60.901 60.000 0.00 0.00 0.00 4.34
7466 9685 4.135153 GCTCTCTGCGGGCTCGAA 62.135 66.667 12.03 0.00 39.00 3.71
7782 10162 2.604686 ACGGCCTCTTCTCCAGCA 60.605 61.111 0.00 0.00 0.00 4.41
7810 10190 1.129251 CAACATGATGCTCGGTGTCAC 59.871 52.381 0.00 0.00 0.00 3.67
7811 10191 0.737367 ACATGATGCTCGGTGTCACG 60.737 55.000 0.00 0.00 0.00 4.35
7973 10362 5.297278 AGTGTAGTAGTCGTCCATCTGAATC 59.703 44.000 0.00 0.00 0.00 2.52
7998 10391 5.826737 ACAGAAAGAATGATAGAATGGGCTG 59.173 40.000 0.00 0.00 0.00 4.85
8007 10400 1.915141 AGAATGGGCTGGACACAAAG 58.085 50.000 0.00 0.00 0.00 2.77
8028 10421 2.030363 GCACACATTGGGTCGAATTTGA 60.030 45.455 0.00 0.00 0.00 2.69
8058 10455 6.313744 ACCAACTGCTAGAATTTACACAAC 57.686 37.500 0.00 0.00 0.00 3.32
8059 10456 5.825679 ACCAACTGCTAGAATTTACACAACA 59.174 36.000 0.00 0.00 0.00 3.33
8060 10457 6.320164 ACCAACTGCTAGAATTTACACAACAA 59.680 34.615 0.00 0.00 0.00 2.83
8061 10458 7.014230 ACCAACTGCTAGAATTTACACAACAAT 59.986 33.333 0.00 0.00 0.00 2.71
8062 10459 7.867403 CCAACTGCTAGAATTTACACAACAATT 59.133 33.333 0.00 0.00 0.00 2.32
8063 10460 9.248291 CAACTGCTAGAATTTACACAACAATTT 57.752 29.630 0.00 0.00 0.00 1.82
8064 10461 8.801715 ACTGCTAGAATTTACACAACAATTTG 57.198 30.769 0.00 0.00 38.83 2.32
8137 10534 4.408821 GGCGTGCCCATCACCAGA 62.409 66.667 0.00 0.00 42.69 3.86
8174 10571 4.383861 CTGACTCCAGCAGCCGCA 62.384 66.667 0.00 0.00 42.27 5.69
8225 10628 1.134487 GCACTAAAATGCAGCGCGA 59.866 52.632 12.10 0.00 45.39 5.87
8288 10699 6.629128 ACACATTCACAAAACAAAGACATGA 58.371 32.000 0.00 0.00 0.00 3.07
8429 10851 8.035984 ACAACATCAATTGCACAAATCATGATA 58.964 29.630 9.04 0.00 32.47 2.15
8499 10921 1.163420 AGTTCATTGTGCGTTGCCGA 61.163 50.000 0.00 0.00 35.63 5.54
8500 10922 0.109781 GTTCATTGTGCGTTGCCGAT 60.110 50.000 0.00 0.00 35.63 4.18
8614 11037 1.267121 AGTCTACATCTTGGCCACGT 58.733 50.000 3.88 2.81 0.00 4.49
8699 11122 2.222027 GATCCCAAAATCTAGCCGGTG 58.778 52.381 1.90 0.00 0.00 4.94
8724 11147 5.260424 TCTCACAATAGCAAATTGGGCTTA 58.740 37.500 9.83 0.00 42.62 3.09
8749 11172 1.734655 TCCCAAAAGCTCTCTCCACT 58.265 50.000 0.00 0.00 0.00 4.00
8842 11267 3.196469 TCACAAATGTTTGCCACTTTGGA 59.804 39.130 5.44 0.00 41.79 3.53
8867 11292 2.821991 GCCATCCGCAAGATAGTAGT 57.178 50.000 0.00 0.00 43.02 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 1.311651 GGCAAAGGAAGAGCTGGAGC 61.312 60.000 0.00 0.00 42.49 4.70
12 13 1.023513 CGGCAAAGGAAGAGCTGGAG 61.024 60.000 0.00 0.00 0.00 3.86
13 14 1.003355 CGGCAAAGGAAGAGCTGGA 60.003 57.895 0.00 0.00 0.00 3.86
21 22 2.855514 GCTGTTGGCGGCAAAGGAA 61.856 57.895 27.23 11.31 45.96 3.36
22 23 3.294493 GCTGTTGGCGGCAAAGGA 61.294 61.111 27.23 12.20 45.96 3.36
33 34 0.318107 CTTTTGTGGCCGAGCTGTTG 60.318 55.000 0.00 0.00 0.00 3.33
34 35 2.032981 CTTTTGTGGCCGAGCTGTT 58.967 52.632 0.00 0.00 0.00 3.16
44 45 0.102120 TGGCGTTGAAGCTTTTGTGG 59.898 50.000 0.00 0.00 37.29 4.17
46 47 1.680735 TCATGGCGTTGAAGCTTTTGT 59.319 42.857 0.00 0.00 37.29 2.83
48 49 2.557924 TCATCATGGCGTTGAAGCTTTT 59.442 40.909 0.00 0.00 37.29 2.27
53 54 4.424061 TCTTTTCATCATGGCGTTGAAG 57.576 40.909 0.00 0.00 35.32 3.02
55 56 3.758023 ACATCTTTTCATCATGGCGTTGA 59.242 39.130 0.00 0.00 0.00 3.18
56 57 3.855379 CACATCTTTTCATCATGGCGTTG 59.145 43.478 0.00 0.00 0.00 4.10
60 62 3.444916 CTGCACATCTTTTCATCATGGC 58.555 45.455 0.00 0.00 0.00 4.40
146 148 3.650070 TTGGATCTACTCTATGCTGCG 57.350 47.619 0.00 0.00 0.00 5.18
164 170 1.003118 TCTCGGTGGATTGGTCCTTTG 59.997 52.381 0.00 0.00 45.32 2.77
189 195 6.068676 TGGCTGGATGGATGGATATGATTATT 60.069 38.462 0.00 0.00 0.00 1.40
190 196 5.434044 TGGCTGGATGGATGGATATGATTAT 59.566 40.000 0.00 0.00 0.00 1.28
191 197 4.789702 TGGCTGGATGGATGGATATGATTA 59.210 41.667 0.00 0.00 0.00 1.75
390 407 1.682867 GCTGCACGCGCGCATATATA 61.683 55.000 32.58 10.64 42.06 0.86
423 444 6.715280 AGACTTGAAGCATTATCTTCCTTCA 58.285 36.000 0.00 0.00 41.23 3.02
424 445 7.622893 AAGACTTGAAGCATTATCTTCCTTC 57.377 36.000 0.00 0.00 41.23 3.46
425 446 9.336171 GATAAGACTTGAAGCATTATCTTCCTT 57.664 33.333 16.56 0.00 41.23 3.36
426 447 8.713036 AGATAAGACTTGAAGCATTATCTTCCT 58.287 33.333 19.01 8.19 39.14 3.36
427 448 8.900983 AGATAAGACTTGAAGCATTATCTTCC 57.099 34.615 19.01 6.66 39.14 3.46
445 466 4.442893 CGGTGGACAATTGGCTAGATAAGA 60.443 45.833 11.97 0.00 0.00 2.10
547 573 2.663119 GTGCAATGCGATGAAGAAAACC 59.337 45.455 0.00 0.00 0.00 3.27
551 577 0.179192 GCGTGCAATGCGATGAAGAA 60.179 50.000 0.00 0.00 40.15 2.52
552 578 1.425031 GCGTGCAATGCGATGAAGA 59.575 52.632 0.00 0.00 40.15 2.87
553 579 3.972537 GCGTGCAATGCGATGAAG 58.027 55.556 0.00 0.00 40.15 3.02
578 604 1.738350 TGCACTAGCTAGTCTCGTGAC 59.262 52.381 23.68 9.57 39.95 3.67
580 606 1.740585 AGTGCACTAGCTAGTCTCGTG 59.259 52.381 23.68 13.88 40.37 4.35
582 608 2.010497 TGAGTGCACTAGCTAGTCTCG 58.990 52.381 23.68 13.78 42.74 4.04
585 611 8.270080 TGTATATATGAGTGCACTAGCTAGTC 57.730 38.462 23.68 17.52 42.74 2.59
591 620 7.318893 ACTGCATGTATATATGAGTGCACTAG 58.681 38.462 21.73 10.56 37.63 2.57
592 621 7.232118 ACTGCATGTATATATGAGTGCACTA 57.768 36.000 21.73 4.46 37.63 2.74
593 622 6.106648 ACTGCATGTATATATGAGTGCACT 57.893 37.500 21.88 21.88 37.63 4.40
594 623 7.889589 TTACTGCATGTATATATGAGTGCAC 57.110 36.000 9.40 9.40 37.63 4.57
624 653 3.250040 AGGTTGGAACTGAACGAATTTCG 59.750 43.478 16.84 16.84 46.93 3.46
687 717 5.159209 CAAGGAAAAGCAAAGCATCTAGTG 58.841 41.667 0.00 0.00 0.00 2.74
688 718 4.219288 CCAAGGAAAAGCAAAGCATCTAGT 59.781 41.667 0.00 0.00 0.00 2.57
689 719 4.741342 CCAAGGAAAAGCAAAGCATCTAG 58.259 43.478 0.00 0.00 0.00 2.43
690 720 3.056607 GCCAAGGAAAAGCAAAGCATCTA 60.057 43.478 0.00 0.00 0.00 1.98
691 721 2.289257 GCCAAGGAAAAGCAAAGCATCT 60.289 45.455 0.00 0.00 0.00 2.90
692 722 2.071540 GCCAAGGAAAAGCAAAGCATC 58.928 47.619 0.00 0.00 0.00 3.91
693 723 1.271001 GGCCAAGGAAAAGCAAAGCAT 60.271 47.619 0.00 0.00 0.00 3.79
694 724 0.106521 GGCCAAGGAAAAGCAAAGCA 59.893 50.000 0.00 0.00 0.00 3.91
696 726 0.758123 TGGGCCAAGGAAAAGCAAAG 59.242 50.000 2.13 0.00 0.00 2.77
697 727 1.140652 CTTGGGCCAAGGAAAAGCAAA 59.859 47.619 34.03 1.95 37.77 3.68
698 728 0.758123 CTTGGGCCAAGGAAAAGCAA 59.242 50.000 34.03 2.52 37.77 3.91
803 833 5.491982 AGAACCATATGGACAGTTGAGTTC 58.508 41.667 28.77 16.55 38.94 3.01
807 837 6.841229 AGATAGAGAACCATATGGACAGTTGA 59.159 38.462 28.77 7.92 38.94 3.18
828 858 7.036220 GGAAGTTCGAGTGAAGAAATGAGATA 58.964 38.462 0.00 0.00 33.98 1.98
845 875 2.028020 GGGCCTATAGGATGGAAGTTCG 60.028 54.545 23.61 0.00 37.39 3.95
852 882 3.054361 GGTAACATGGGCCTATAGGATGG 60.054 52.174 23.61 8.64 37.39 3.51
900 930 3.343617 ACGCAATGGGGTATATATGCAC 58.656 45.455 1.62 0.00 38.58 4.57
911 943 3.263425 AGGTATTATAGGACGCAATGGGG 59.737 47.826 1.62 0.00 0.00 4.96
972 1004 1.081641 CGTGTGGCTAACGACGTCT 60.082 57.895 14.70 0.00 43.68 4.18
999 1031 2.418976 CACTGGACTCATCTTGCACATG 59.581 50.000 0.00 0.00 0.00 3.21
1739 1780 4.864806 AGCTGATAAATGTACTCACACGTG 59.135 41.667 15.48 15.48 37.54 4.49
1740 1781 4.864806 CAGCTGATAAATGTACTCACACGT 59.135 41.667 8.42 0.00 37.54 4.49
1741 1782 5.004821 GTCAGCTGATAAATGTACTCACACG 59.995 44.000 21.47 0.00 37.54 4.49
1743 1784 5.187772 AGGTCAGCTGATAAATGTACTCACA 59.812 40.000 21.47 0.00 39.52 3.58
1744 1785 5.665459 AGGTCAGCTGATAAATGTACTCAC 58.335 41.667 21.47 2.02 0.00 3.51
1745 1786 5.939764 AGGTCAGCTGATAAATGTACTCA 57.060 39.130 21.47 0.00 0.00 3.41
1781 1830 8.367911 AGACAGTGTGATCTTCTAACAAACATA 58.632 33.333 0.00 0.00 0.00 2.29
1956 2296 2.862541 TGCATGGTTCACTTGCTAAGT 58.137 42.857 0.00 0.00 46.99 2.24
1977 2317 7.333423 ACATAAATGTTGCATCAAGTACGTACT 59.667 33.333 22.45 22.45 37.90 2.73
2003 2855 6.976349 GCTTTGAAATGCATACTCATGATCAA 59.024 34.615 11.16 0.00 34.31 2.57
2022 2874 4.944962 ATTCATCGACATTTCGCTTTGA 57.055 36.364 0.00 0.00 45.46 2.69
2042 3019 3.809832 ACGTTCGCCTACTACATACGTAT 59.190 43.478 1.14 1.14 38.76 3.06
2060 3037 2.713967 CCGGTGGATCGGGTACGTT 61.714 63.158 0.00 0.00 45.78 3.99
2107 3084 2.816411 ACTCCAAGTATCTTCCACCGA 58.184 47.619 0.00 0.00 0.00 4.69
2115 3092 9.965902 AAATCATGTTTTCTACTCCAAGTATCT 57.034 29.630 0.00 0.00 29.08 1.98
2138 3115 7.465781 GCTGCATGTTTGTACTTTTTGACAAAT 60.466 33.333 0.50 0.00 44.81 2.32
2141 3118 4.803088 GCTGCATGTTTGTACTTTTTGACA 59.197 37.500 0.00 0.00 0.00 3.58
2171 3148 4.927782 TGCGACACACACCCCAGC 62.928 66.667 0.00 0.00 0.00 4.85
2172 3149 1.577328 GATTGCGACACACACCCCAG 61.577 60.000 0.00 0.00 0.00 4.45
2173 3150 1.599518 GATTGCGACACACACCCCA 60.600 57.895 0.00 0.00 0.00 4.96
2202 3183 7.040062 AGTGTAAACTATAATGCCAAAACAGCA 60.040 33.333 0.00 0.00 45.94 4.41
2203 3184 7.312899 AGTGTAAACTATAATGCCAAAACAGC 58.687 34.615 0.00 0.00 0.00 4.40
2256 3238 1.544724 ACACACAGCCTGTTTGTTGT 58.455 45.000 10.76 2.03 37.98 3.32
2257 3239 2.652941 AACACACAGCCTGTTTGTTG 57.347 45.000 24.34 9.22 45.96 3.33
2269 3251 1.547820 TGAAGGCAAGCAAAACACACA 59.452 42.857 0.00 0.00 0.00 3.72
2470 3456 5.409826 AGATTCTCCTAAACTTTGCGACAAG 59.590 40.000 0.00 0.00 0.00 3.16
2589 3577 7.148853 GCCATGAATTGATCGATTTTAGATTGC 60.149 37.037 9.62 4.60 0.00 3.56
2594 3582 6.075762 TGGCCATGAATTGATCGATTTTAG 57.924 37.500 0.00 3.12 0.00 1.85
2595 3583 6.462552 TTGGCCATGAATTGATCGATTTTA 57.537 33.333 6.09 3.28 0.00 1.52
2599 3587 3.956199 AGTTTGGCCATGAATTGATCGAT 59.044 39.130 6.09 0.00 0.00 3.59
2601 3589 3.788333 AGTTTGGCCATGAATTGATCG 57.212 42.857 6.09 0.00 0.00 3.69
2608 3596 3.237268 ACCTGTTAGTTTGGCCATGAA 57.763 42.857 6.09 0.00 0.00 2.57
2622 3610 0.830444 TCACGTGGGCTCTACCTGTT 60.830 55.000 17.00 0.00 39.10 3.16
2657 3645 1.459348 TGTCCACCTCAGCACCTCA 60.459 57.895 0.00 0.00 0.00 3.86
2665 3653 1.126948 TGGAGCATGTGTCCACCTCA 61.127 55.000 13.31 0.00 39.28 3.86
2687 3675 5.048224 CACAAAAAGAGATGTGGAAGATGCT 60.048 40.000 0.00 0.00 42.46 3.79
2740 3728 1.910671 ACAATAGGGCGACAAGGGTAA 59.089 47.619 0.00 0.00 0.00 2.85
2742 3730 0.252197 GACAATAGGGCGACAAGGGT 59.748 55.000 0.00 0.00 0.00 4.34
2745 3733 7.494625 TCTTATTTTAGACAATAGGGCGACAAG 59.505 37.037 0.00 0.00 0.00 3.16
2746 3734 7.332557 TCTTATTTTAGACAATAGGGCGACAA 58.667 34.615 0.00 0.00 0.00 3.18
2747 3735 6.880484 TCTTATTTTAGACAATAGGGCGACA 58.120 36.000 0.00 0.00 0.00 4.35
2748 3736 7.095187 CCATCTTATTTTAGACAATAGGGCGAC 60.095 40.741 0.00 0.00 0.00 5.19
2749 3737 6.934645 CCATCTTATTTTAGACAATAGGGCGA 59.065 38.462 0.00 0.00 0.00 5.54
2750 3738 6.934645 TCCATCTTATTTTAGACAATAGGGCG 59.065 38.462 0.00 0.00 0.00 6.13
2751 3739 7.094592 GCTCCATCTTATTTTAGACAATAGGGC 60.095 40.741 0.00 0.00 0.00 5.19
2752 3740 8.160106 AGCTCCATCTTATTTTAGACAATAGGG 58.840 37.037 0.00 0.00 0.00 3.53
2761 3749 9.660180 GGGTTAGATAGCTCCATCTTATTTTAG 57.340 37.037 4.34 0.00 36.63 1.85
2762 3750 9.166222 TGGGTTAGATAGCTCCATCTTATTTTA 57.834 33.333 4.34 0.00 36.63 1.52
2763 3751 7.939588 GTGGGTTAGATAGCTCCATCTTATTTT 59.060 37.037 4.34 0.00 36.63 1.82
2764 3752 7.454225 GTGGGTTAGATAGCTCCATCTTATTT 58.546 38.462 4.34 0.00 36.63 1.40
2765 3753 6.013293 GGTGGGTTAGATAGCTCCATCTTATT 60.013 42.308 4.34 0.00 36.63 1.40
2766 3754 5.485708 GGTGGGTTAGATAGCTCCATCTTAT 59.514 44.000 4.34 0.00 36.63 1.73
2767 3755 4.838986 GGTGGGTTAGATAGCTCCATCTTA 59.161 45.833 4.34 0.00 36.63 2.10
2768 3756 3.648545 GGTGGGTTAGATAGCTCCATCTT 59.351 47.826 4.34 0.00 36.63 2.40
2769 3757 3.243724 GGTGGGTTAGATAGCTCCATCT 58.756 50.000 4.45 4.45 38.76 2.90
2770 3758 2.303311 GGGTGGGTTAGATAGCTCCATC 59.697 54.545 0.00 0.00 0.00 3.51
2771 3759 2.339769 GGGTGGGTTAGATAGCTCCAT 58.660 52.381 0.00 0.00 0.00 3.41
2772 3760 1.009060 TGGGTGGGTTAGATAGCTCCA 59.991 52.381 0.00 0.00 0.00 3.86
2773 3761 1.694696 CTGGGTGGGTTAGATAGCTCC 59.305 57.143 0.00 0.00 0.00 4.70
2774 3762 2.679082 TCTGGGTGGGTTAGATAGCTC 58.321 52.381 0.00 0.00 0.00 4.09
2775 3763 2.868964 TCTGGGTGGGTTAGATAGCT 57.131 50.000 0.00 0.00 0.00 3.32
2776 3764 4.390264 GAAATCTGGGTGGGTTAGATAGC 58.610 47.826 0.00 0.00 31.30 2.97
2777 3765 4.344102 TCGAAATCTGGGTGGGTTAGATAG 59.656 45.833 0.00 0.00 31.30 2.08
2778 3766 4.291792 TCGAAATCTGGGTGGGTTAGATA 58.708 43.478 0.00 0.00 31.30 1.98
2779 3767 3.112263 TCGAAATCTGGGTGGGTTAGAT 58.888 45.455 0.00 0.00 32.80 1.98
2780 3768 2.500098 CTCGAAATCTGGGTGGGTTAGA 59.500 50.000 0.00 0.00 0.00 2.10
2781 3769 2.236395 ACTCGAAATCTGGGTGGGTTAG 59.764 50.000 0.00 0.00 0.00 2.34
2782 3770 2.235402 GACTCGAAATCTGGGTGGGTTA 59.765 50.000 0.00 0.00 0.00 2.85
2783 3771 1.003233 GACTCGAAATCTGGGTGGGTT 59.997 52.381 0.00 0.00 0.00 4.11
2784 3772 0.613777 GACTCGAAATCTGGGTGGGT 59.386 55.000 0.00 0.00 0.00 4.51
2785 3773 0.613260 TGACTCGAAATCTGGGTGGG 59.387 55.000 0.00 0.00 0.00 4.61
2786 3774 1.001974 TGTGACTCGAAATCTGGGTGG 59.998 52.381 0.00 0.00 0.00 4.61
2787 3775 2.029020 TCTGTGACTCGAAATCTGGGTG 60.029 50.000 0.00 0.00 0.00 4.61
2788 3776 2.232452 CTCTGTGACTCGAAATCTGGGT 59.768 50.000 0.00 0.00 0.00 4.51
2789 3777 2.232452 ACTCTGTGACTCGAAATCTGGG 59.768 50.000 0.00 0.00 0.00 4.45
2790 3778 3.584406 ACTCTGTGACTCGAAATCTGG 57.416 47.619 0.00 0.00 0.00 3.86
2791 3779 6.587990 ACAATTACTCTGTGACTCGAAATCTG 59.412 38.462 0.00 0.00 0.00 2.90
2792 3780 6.587990 CACAATTACTCTGTGACTCGAAATCT 59.412 38.462 0.00 0.00 45.80 2.40
2793 3781 6.183360 CCACAATTACTCTGTGACTCGAAATC 60.183 42.308 4.57 0.00 45.80 2.17
2794 3782 5.639506 CCACAATTACTCTGTGACTCGAAAT 59.360 40.000 4.57 0.00 45.80 2.17
2795 3783 4.988540 CCACAATTACTCTGTGACTCGAAA 59.011 41.667 4.57 0.00 45.80 3.46
2796 3784 4.038763 ACCACAATTACTCTGTGACTCGAA 59.961 41.667 4.57 0.00 45.80 3.71
2797 3785 3.572682 ACCACAATTACTCTGTGACTCGA 59.427 43.478 4.57 0.00 45.80 4.04
2798 3786 3.675225 CACCACAATTACTCTGTGACTCG 59.325 47.826 4.57 0.00 45.80 4.18
2799 3787 3.433615 GCACCACAATTACTCTGTGACTC 59.566 47.826 4.57 0.00 45.80 3.36
2800 3788 3.071602 AGCACCACAATTACTCTGTGACT 59.928 43.478 4.57 0.00 45.80 3.41
2801 3789 3.403038 AGCACCACAATTACTCTGTGAC 58.597 45.455 4.57 0.00 45.80 3.67
2802 3790 3.769739 AGCACCACAATTACTCTGTGA 57.230 42.857 4.57 0.00 45.80 3.58
2803 3791 5.237815 TCTAAGCACCACAATTACTCTGTG 58.762 41.667 0.00 0.00 43.15 3.66
2804 3792 5.012148 ACTCTAAGCACCACAATTACTCTGT 59.988 40.000 0.00 0.00 0.00 3.41
2805 3793 5.482908 ACTCTAAGCACCACAATTACTCTG 58.517 41.667 0.00 0.00 0.00 3.35
2806 3794 5.746990 ACTCTAAGCACCACAATTACTCT 57.253 39.130 0.00 0.00 0.00 3.24
2807 3795 6.651225 AGAAACTCTAAGCACCACAATTACTC 59.349 38.462 0.00 0.00 0.00 2.59
2808 3796 6.534634 AGAAACTCTAAGCACCACAATTACT 58.465 36.000 0.00 0.00 0.00 2.24
2809 3797 6.128254 GGAGAAACTCTAAGCACCACAATTAC 60.128 42.308 0.00 0.00 0.00 1.89
2810 3798 5.938125 GGAGAAACTCTAAGCACCACAATTA 59.062 40.000 0.00 0.00 0.00 1.40
2811 3799 4.762251 GGAGAAACTCTAAGCACCACAATT 59.238 41.667 0.00 0.00 0.00 2.32
2812 3800 4.042187 AGGAGAAACTCTAAGCACCACAAT 59.958 41.667 0.00 0.00 0.00 2.71
2813 3801 3.391296 AGGAGAAACTCTAAGCACCACAA 59.609 43.478 0.00 0.00 0.00 3.33
2814 3802 2.972713 AGGAGAAACTCTAAGCACCACA 59.027 45.455 0.00 0.00 0.00 4.17
2815 3803 3.686916 AGGAGAAACTCTAAGCACCAC 57.313 47.619 0.00 0.00 0.00 4.16
2816 3804 7.490657 TTAATAGGAGAAACTCTAAGCACCA 57.509 36.000 0.00 0.00 0.00 4.17
2817 3805 8.788325 TTTTAATAGGAGAAACTCTAAGCACC 57.212 34.615 0.00 0.00 0.00 5.01
2839 3827 8.669571 ACTAGCCCTTGGACACATATATATTTT 58.330 33.333 0.00 0.00 0.00 1.82
2840 3828 8.219660 ACTAGCCCTTGGACACATATATATTT 57.780 34.615 0.00 0.00 0.00 1.40
2841 3829 7.092846 GGACTAGCCCTTGGACACATATATATT 60.093 40.741 0.00 0.00 0.00 1.28
2842 3830 6.384305 GGACTAGCCCTTGGACACATATATAT 59.616 42.308 0.00 0.00 0.00 0.86
2843 3831 5.720041 GGACTAGCCCTTGGACACATATATA 59.280 44.000 0.00 0.00 0.00 0.86
2844 3832 4.532521 GGACTAGCCCTTGGACACATATAT 59.467 45.833 0.00 0.00 0.00 0.86
2845 3833 3.901844 GGACTAGCCCTTGGACACATATA 59.098 47.826 0.00 0.00 0.00 0.86
2846 3834 2.706190 GGACTAGCCCTTGGACACATAT 59.294 50.000 0.00 0.00 0.00 1.78
2847 3835 2.116238 GGACTAGCCCTTGGACACATA 58.884 52.381 0.00 0.00 0.00 2.29
2848 3836 0.912486 GGACTAGCCCTTGGACACAT 59.088 55.000 0.00 0.00 0.00 3.21
2849 3837 0.472925 TGGACTAGCCCTTGGACACA 60.473 55.000 0.00 0.00 34.97 3.72
2850 3838 0.250513 CTGGACTAGCCCTTGGACAC 59.749 60.000 0.00 0.00 34.97 3.67
2851 3839 0.909610 CCTGGACTAGCCCTTGGACA 60.910 60.000 0.00 0.00 34.97 4.02
2852 3840 0.617820 TCCTGGACTAGCCCTTGGAC 60.618 60.000 6.36 0.00 34.97 4.02
2853 3841 0.343372 ATCCTGGACTAGCCCTTGGA 59.657 55.000 11.39 11.39 35.36 3.53
2854 3842 0.471617 CATCCTGGACTAGCCCTTGG 59.528 60.000 0.00 0.00 34.97 3.61
2855 3843 1.207791 ACATCCTGGACTAGCCCTTG 58.792 55.000 0.00 0.00 34.97 3.61
2856 3844 1.840635 GAACATCCTGGACTAGCCCTT 59.159 52.381 0.00 0.00 34.97 3.95
2857 3845 1.008938 AGAACATCCTGGACTAGCCCT 59.991 52.381 0.00 0.00 34.97 5.19
2858 3846 1.414550 GAGAACATCCTGGACTAGCCC 59.585 57.143 0.00 0.00 34.97 5.19
2859 3847 1.067821 CGAGAACATCCTGGACTAGCC 59.932 57.143 0.00 0.00 37.10 3.93
2860 3848 1.751924 ACGAGAACATCCTGGACTAGC 59.248 52.381 0.00 0.00 0.00 3.42
2861 3849 4.457834 AAACGAGAACATCCTGGACTAG 57.542 45.455 0.00 0.00 0.00 2.57
2862 3850 4.884668 AAAACGAGAACATCCTGGACTA 57.115 40.909 0.00 0.00 0.00 2.59
2863 3851 3.771577 AAAACGAGAACATCCTGGACT 57.228 42.857 0.00 0.00 0.00 3.85
2881 3869 6.553852 AGGCGAGGGTAGAGATAGAATAAAAA 59.446 38.462 0.00 0.00 0.00 1.94
2882 3870 6.075984 AGGCGAGGGTAGAGATAGAATAAAA 58.924 40.000 0.00 0.00 0.00 1.52
2883 3871 5.642165 AGGCGAGGGTAGAGATAGAATAAA 58.358 41.667 0.00 0.00 0.00 1.40
2884 3872 5.014333 AGAGGCGAGGGTAGAGATAGAATAA 59.986 44.000 0.00 0.00 0.00 1.40
2885 3873 4.536888 AGAGGCGAGGGTAGAGATAGAATA 59.463 45.833 0.00 0.00 0.00 1.75
2886 3874 3.332485 AGAGGCGAGGGTAGAGATAGAAT 59.668 47.826 0.00 0.00 0.00 2.40
2887 3875 2.712087 AGAGGCGAGGGTAGAGATAGAA 59.288 50.000 0.00 0.00 0.00 2.10
2888 3876 2.303600 GAGAGGCGAGGGTAGAGATAGA 59.696 54.545 0.00 0.00 0.00 1.98
2889 3877 2.304761 AGAGAGGCGAGGGTAGAGATAG 59.695 54.545 0.00 0.00 0.00 2.08
2903 3891 2.703007 AGAGAGAGAGAGAGAGAGAGGC 59.297 54.545 0.00 0.00 0.00 4.70
2910 3898 5.185454 GTGTTGATGAGAGAGAGAGAGAGA 58.815 45.833 0.00 0.00 0.00 3.10
2915 3903 3.013219 TCGGTGTTGATGAGAGAGAGAG 58.987 50.000 0.00 0.00 0.00 3.20
2918 3906 2.796557 AGTCGGTGTTGATGAGAGAGA 58.203 47.619 0.00 0.00 0.00 3.10
2923 3911 5.862924 AAAACATAGTCGGTGTTGATGAG 57.137 39.130 0.00 0.00 39.57 2.90
2987 3987 6.928979 TCTTGTTTGGAAATTCTTGTACGA 57.071 33.333 0.00 0.00 0.00 3.43
3077 4079 2.606961 CGACCAGCTTTGCTCGCAA 61.607 57.895 0.00 0.00 36.40 4.85
3078 4080 3.043713 CGACCAGCTTTGCTCGCA 61.044 61.111 0.00 0.00 36.40 5.10
3107 4762 0.471780 TTGCTCAGGTGAGACAGGGA 60.472 55.000 11.29 0.00 44.74 4.20
3109 4764 0.321122 GGTTGCTCAGGTGAGACAGG 60.321 60.000 11.29 0.00 44.74 4.00
3142 4797 5.059833 CCAACTGTTCTTTCTAGAAGCTGT 58.940 41.667 5.12 5.48 40.95 4.40
3149 4804 6.097915 TGACTACCCAACTGTTCTTTCTAG 57.902 41.667 0.00 0.00 0.00 2.43
3161 4816 5.116882 GGTCTACAATGATGACTACCCAAC 58.883 45.833 9.26 0.00 0.00 3.77
3162 4817 4.780554 TGGTCTACAATGATGACTACCCAA 59.219 41.667 9.26 0.00 0.00 4.12
3163 4818 4.358214 TGGTCTACAATGATGACTACCCA 58.642 43.478 9.26 0.00 0.00 4.51
3167 4822 6.183360 CGTCTTCTGGTCTACAATGATGACTA 60.183 42.308 9.26 4.20 32.93 2.59
3172 4827 3.430929 GGCGTCTTCTGGTCTACAATGAT 60.431 47.826 0.00 0.00 0.00 2.45
3175 4830 1.135083 CGGCGTCTTCTGGTCTACAAT 60.135 52.381 0.00 0.00 0.00 2.71
3176 4831 0.242825 CGGCGTCTTCTGGTCTACAA 59.757 55.000 0.00 0.00 0.00 2.41
3200 4855 5.022282 TGAGTTGCGATCTATCCATTTCA 57.978 39.130 0.00 0.00 0.00 2.69
3204 4859 4.586421 TCTTCTGAGTTGCGATCTATCCAT 59.414 41.667 0.00 0.00 0.00 3.41
3215 4870 2.032808 GTGTCGGTTTCTTCTGAGTTGC 60.033 50.000 0.00 0.00 0.00 4.17
3217 4872 3.821421 AGTGTCGGTTTCTTCTGAGTT 57.179 42.857 0.00 0.00 0.00 3.01
3218 4873 4.583489 TCTTAGTGTCGGTTTCTTCTGAGT 59.417 41.667 0.00 0.00 0.00 3.41
3221 4876 4.686554 CCTTCTTAGTGTCGGTTTCTTCTG 59.313 45.833 0.00 0.00 0.00 3.02
3224 4879 4.502777 GGTCCTTCTTAGTGTCGGTTTCTT 60.503 45.833 0.00 0.00 0.00 2.52
3229 4884 1.893801 CTGGTCCTTCTTAGTGTCGGT 59.106 52.381 0.00 0.00 0.00 4.69
3250 4905 6.045955 GTCTGGTTGGAGTTGAGATTATCTC 58.954 44.000 14.79 14.79 43.65 2.75
3255 4910 3.244700 CCTGTCTGGTTGGAGTTGAGATT 60.245 47.826 0.00 0.00 0.00 2.40
3266 4921 1.538876 TCCCTCCCCTGTCTGGTTG 60.539 63.158 0.00 0.00 0.00 3.77
3267 4922 1.229658 CTCCCTCCCCTGTCTGGTT 60.230 63.158 0.00 0.00 0.00 3.67
3277 4934 2.170817 GTGAGGTTTATGTCTCCCTCCC 59.829 54.545 0.00 0.00 42.33 4.30
3361 5018 4.034048 GGGAATGACGTTGTGATATGTGTC 59.966 45.833 0.00 0.00 0.00 3.67
3363 5020 4.191544 AGGGAATGACGTTGTGATATGTG 58.808 43.478 0.00 0.00 0.00 3.21
3368 5025 2.346803 CGAAGGGAATGACGTTGTGAT 58.653 47.619 0.00 0.00 0.00 3.06
3381 5038 3.691342 CGGTGTCCTGCGAAGGGA 61.691 66.667 10.39 0.00 0.00 4.20
3396 5053 4.415490 CGTTTGTTCATGACGCGG 57.585 55.556 12.47 0.00 0.00 6.46
3436 5094 2.113807 TGGAGGATGGTGTGATCTGAG 58.886 52.381 0.00 0.00 0.00 3.35
3438 5096 2.238144 AGTTGGAGGATGGTGTGATCTG 59.762 50.000 0.00 0.00 0.00 2.90
3456 5114 0.885879 TGTAGTGGCATCGACGAGTT 59.114 50.000 3.01 0.00 0.00 3.01
3466 5124 3.559171 GGAAGTCCTTCATTGTAGTGGCA 60.559 47.826 9.12 0.00 41.20 4.92
3474 5132 2.756760 CCCATGTGGAAGTCCTTCATTG 59.243 50.000 9.12 0.86 41.20 2.82
3488 5146 1.427809 TCCTCAGCTATCCCCATGTG 58.572 55.000 0.00 0.00 0.00 3.21
3502 5160 4.658063 ACAATTGGAATAACGGTTCCTCA 58.342 39.130 10.83 5.28 46.32 3.86
3511 5169 5.705609 ACACTGGTGACAATTGGAATAAC 57.294 39.130 10.83 0.49 42.06 1.89
3519 5177 4.164843 AGTTGGTACACTGGTGACAATT 57.835 40.909 7.78 4.36 42.06 2.32
3530 5188 3.110447 TCACCGGTAAAGTTGGTACAC 57.890 47.619 6.87 0.00 39.29 2.90
3564 5222 6.258727 CAGTCCGATGCATATTTTGTAGAGTT 59.741 38.462 0.00 0.00 0.00 3.01
3567 5225 5.056480 CCAGTCCGATGCATATTTTGTAGA 58.944 41.667 0.00 0.00 0.00 2.59
3572 5230 2.872245 CGACCAGTCCGATGCATATTTT 59.128 45.455 0.00 0.00 0.00 1.82
3575 5233 1.270826 CTCGACCAGTCCGATGCATAT 59.729 52.381 0.00 0.00 35.35 1.78
3578 5236 2.710902 CCTCGACCAGTCCGATGCA 61.711 63.158 0.00 0.00 35.35 3.96
3579 5237 2.105128 CCTCGACCAGTCCGATGC 59.895 66.667 0.00 0.00 35.35 3.91
3580 5238 2.105128 GCCTCGACCAGTCCGATG 59.895 66.667 0.00 0.00 35.35 3.84
3628 5287 8.053026 TGTTACTTTTGTAGGTTTTGCTACAA 57.947 30.769 0.00 0.00 42.21 2.41
3746 5429 9.014297 CCACAATATAGTTGATAGGAAATTCCC 57.986 37.037 8.66 0.00 37.19 3.97
3762 5445 2.698797 ACACCCTCCGTCCACAATATAG 59.301 50.000 0.00 0.00 0.00 1.31
3764 5447 1.580059 ACACCCTCCGTCCACAATAT 58.420 50.000 0.00 0.00 0.00 1.28
3765 5448 1.826720 GTACACCCTCCGTCCACAATA 59.173 52.381 0.00 0.00 0.00 1.90
3766 5449 0.611714 GTACACCCTCCGTCCACAAT 59.388 55.000 0.00 0.00 0.00 2.71
3768 5451 0.759812 TTGTACACCCTCCGTCCACA 60.760 55.000 0.00 0.00 0.00 4.17
3769 5452 0.611714 ATTGTACACCCTCCGTCCAC 59.388 55.000 0.00 0.00 0.00 4.02
3807 5968 5.920085 CACAGATTTATGTGCACATTTCG 57.080 39.130 35.45 23.53 43.69 3.46
3819 5980 3.819564 TGCTCCTACGCACAGATTTAT 57.180 42.857 0.00 0.00 34.44 1.40
3829 6003 0.951040 AACTGCACTTGCTCCTACGC 60.951 55.000 2.33 0.00 42.66 4.42
3838 6012 4.035558 TCTGAAGCTGTAAAACTGCACTTG 59.964 41.667 10.85 0.60 44.20 3.16
3842 6016 2.878406 GGTCTGAAGCTGTAAAACTGCA 59.122 45.455 10.85 0.00 44.20 4.41
3849 6023 5.489792 AAGATTGAGGTCTGAAGCTGTAA 57.510 39.130 0.00 0.00 32.07 2.41
3877 6051 6.175712 AGAGAGCGCTTTCTTTTATCAAAG 57.824 37.500 23.73 0.00 40.91 2.77
3890 6064 0.179097 GGAAATCGGAGAGAGCGCTT 60.179 55.000 13.26 0.58 43.63 4.68
3949 6123 4.062293 GGTTGTTATGTTGCTTTTTCCCC 58.938 43.478 0.00 0.00 0.00 4.81
3950 6124 4.062293 GGGTTGTTATGTTGCTTTTTCCC 58.938 43.478 0.00 0.00 0.00 3.97
3951 6125 4.062293 GGGGTTGTTATGTTGCTTTTTCC 58.938 43.478 0.00 0.00 0.00 3.13
3952 6126 4.062293 GGGGGTTGTTATGTTGCTTTTTC 58.938 43.478 0.00 0.00 0.00 2.29
4144 6327 7.275920 CCTTGTAGCCTCTGTTCTTATAACAT 58.724 38.462 0.00 0.00 0.00 2.71
4307 6495 0.631753 AGACTGGGAGGATCGAAGGA 59.368 55.000 0.00 0.00 34.37 3.36
4478 6666 3.378112 ACAACAATAGGGTGAATGATGCG 59.622 43.478 0.00 0.00 0.00 4.73
4480 6668 6.513806 TTGACAACAATAGGGTGAATGATG 57.486 37.500 0.00 0.00 0.00 3.07
4526 6714 1.611006 GCGATCTGCTGGACTATCTGA 59.389 52.381 0.00 0.00 41.73 3.27
4933 7122 6.185114 AGAGGGATGAGATTAAATGGACTG 57.815 41.667 0.00 0.00 0.00 3.51
5000 7189 7.609097 ACTAGGAGATGCAAGAGAATTATGA 57.391 36.000 0.00 0.00 0.00 2.15
5250 7442 1.358787 TGGCCAAACAGGGAGATTCAT 59.641 47.619 0.61 0.00 38.09 2.57
5556 7749 2.404559 CCCTTACAGGCATACCCTACA 58.595 52.381 0.00 0.00 44.09 2.74
5700 7894 5.335661 GCCTATGAAATATTTAGGGTTGCCG 60.336 44.000 14.58 0.00 34.32 5.69
5712 7906 3.395607 TGGGTGCTCTGCCTATGAAATAT 59.604 43.478 0.00 0.00 0.00 1.28
6120 8316 2.426431 TGGAAACAGTTAGAGGGGGA 57.574 50.000 0.00 0.00 35.01 4.81
6302 8498 3.118531 GGCAGATATATCATGGAGGGGT 58.881 50.000 15.08 0.00 0.00 4.95
6409 8605 8.877779 GCCTATCTGTCTATTAAATGTATGCTG 58.122 37.037 0.00 0.00 0.00 4.41
6609 8805 2.099756 GGCACACAATAAATCTCCTGGC 59.900 50.000 0.00 0.00 0.00 4.85
6762 8959 7.913674 AAAAATGTTAGACCTTGCACAAAAA 57.086 28.000 0.00 0.00 0.00 1.94
6791 8988 5.606348 ATTTGGTAGACCTTGCACAAAAA 57.394 34.783 0.00 0.00 36.82 1.94
6792 8989 5.606348 AATTTGGTAGACCTTGCACAAAA 57.394 34.783 0.00 0.00 36.82 2.44
6793 8990 5.452636 GGAAATTTGGTAGACCTTGCACAAA 60.453 40.000 0.00 0.00 36.82 2.83
6794 8991 4.038642 GGAAATTTGGTAGACCTTGCACAA 59.961 41.667 0.00 0.00 36.82 3.33
6795 8992 3.572255 GGAAATTTGGTAGACCTTGCACA 59.428 43.478 0.00 0.00 36.82 4.57
6796 8993 3.056821 GGGAAATTTGGTAGACCTTGCAC 60.057 47.826 0.00 0.00 36.82 4.57
6797 8994 3.161866 GGGAAATTTGGTAGACCTTGCA 58.838 45.455 0.00 0.00 36.82 4.08
6798 8995 3.431415 AGGGAAATTTGGTAGACCTTGC 58.569 45.455 0.00 0.00 36.82 4.01
6799 8996 6.419484 AAAAGGGAAATTTGGTAGACCTTG 57.581 37.500 0.00 0.00 36.98 3.61
6839 9039 4.165779 CCTGCAAACCATCGTACAAATTC 58.834 43.478 0.00 0.00 0.00 2.17
6896 9113 3.458579 CGCTCCGTGAACGTCGTG 61.459 66.667 0.00 0.00 37.74 4.35
6950 9167 1.669440 GAACTCGTGCTGGTACCCA 59.331 57.895 10.07 0.00 0.00 4.51
7298 9517 2.203788 AGCACGTCCTCCTTCCCA 60.204 61.111 0.00 0.00 0.00 4.37
7439 9658 1.743252 GCAGAGAGCCTTCGGGTTG 60.743 63.158 0.00 0.00 37.23 3.77
7460 9679 1.583194 GCCGTCGTAGAGTTCGAGC 60.583 63.158 0.00 0.00 36.95 5.03
7466 9685 0.393944 TGAGGATGCCGTCGTAGAGT 60.394 55.000 0.00 0.00 36.95 3.24
7782 10162 2.490165 GCATCATGTTGCTCCAGCT 58.510 52.632 19.34 0.00 42.66 4.24
7791 10171 1.442769 GTGACACCGAGCATCATGTT 58.557 50.000 0.00 0.00 34.56 2.71
7957 10346 3.092301 TCTGTGATTCAGATGGACGACT 58.908 45.455 0.00 0.00 46.77 4.18
7958 10347 3.510388 TCTGTGATTCAGATGGACGAC 57.490 47.619 0.00 0.00 46.77 4.34
7973 10362 5.826737 AGCCCATTCTATCATTCTTTCTGTG 59.173 40.000 0.00 0.00 0.00 3.66
7986 10379 3.624777 CTTTGTGTCCAGCCCATTCTAT 58.375 45.455 0.00 0.00 0.00 1.98
7998 10391 1.269726 CCCAATGTGTGCTTTGTGTCC 60.270 52.381 0.00 0.00 0.00 4.02
8007 10400 2.030363 TCAAATTCGACCCAATGTGTGC 60.030 45.455 0.00 0.00 0.00 4.57
8028 10421 1.053424 TCTAGCAGTTGGTCGGGTTT 58.947 50.000 0.00 0.00 0.00 3.27
8033 10426 4.688879 TGTGTAAATTCTAGCAGTTGGTCG 59.311 41.667 0.00 0.00 0.00 4.79
8034 10427 6.017440 TGTTGTGTAAATTCTAGCAGTTGGTC 60.017 38.462 0.00 0.00 0.00 4.02
8058 10455 7.587629 TGTTGAAGATGCTCTTAGACAAATTG 58.412 34.615 0.00 0.00 36.73 2.32
8059 10456 7.094463 CCTGTTGAAGATGCTCTTAGACAAATT 60.094 37.037 11.35 0.00 36.73 1.82
8060 10457 6.373774 CCTGTTGAAGATGCTCTTAGACAAAT 59.626 38.462 11.35 0.00 36.73 2.32
8061 10458 5.702670 CCTGTTGAAGATGCTCTTAGACAAA 59.297 40.000 11.35 0.00 36.73 2.83
8062 10459 5.240891 CCTGTTGAAGATGCTCTTAGACAA 58.759 41.667 11.35 0.00 36.73 3.18
8063 10460 4.825422 CCTGTTGAAGATGCTCTTAGACA 58.175 43.478 0.00 6.22 36.73 3.41
8064 10461 3.620821 GCCTGTTGAAGATGCTCTTAGAC 59.379 47.826 0.00 2.84 36.73 2.59
8065 10462 3.677148 CGCCTGTTGAAGATGCTCTTAGA 60.677 47.826 0.00 0.00 36.73 2.10
8100 10497 2.477694 CCGCAAATCAGATTTTAGCGCA 60.478 45.455 24.88 0.00 36.11 6.09
8156 10553 4.385405 GCGGCTGCTGGAGTCAGT 62.385 66.667 11.21 0.00 42.78 3.41
8160 10557 2.111999 TTTAGTGCGGCTGCTGGAGT 62.112 55.000 20.27 14.85 43.34 3.85
8174 10571 1.154225 GCGCGCACTGCATTTTAGT 60.154 52.632 29.10 0.00 46.97 2.24
8413 10835 6.623486 CCAAAGAGTATCATGATTTGTGCAA 58.377 36.000 14.65 0.00 37.82 4.08
8429 10851 1.678970 GGAATGGCCGCCAAAGAGT 60.679 57.895 18.00 0.00 36.95 3.24
8499 10921 4.082517 CCTCCTATCATGTCATTCGACGAT 60.083 45.833 0.00 0.00 45.80 3.73
8500 10922 3.253432 CCTCCTATCATGTCATTCGACGA 59.747 47.826 0.00 0.00 45.80 4.20
8614 11037 8.805918 ATGCACAACATGATCATCGAGAATGAA 61.806 37.037 4.86 0.00 41.90 2.57
8699 11122 3.736126 GCCCAATTTGCTATTGTGAGAGC 60.736 47.826 10.03 0.00 40.51 4.09
8724 11147 3.829026 GGAGAGAGCTTTTGGGATTTTGT 59.171 43.478 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.