Multiple sequence alignment - TraesCS6B01G108000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G108000 chr6B 100.000 4981 0 0 1 4981 88657286 88652306 0.000000e+00 9199.0
1 TraesCS6B01G108000 chr6B 90.020 982 81 12 4009 4981 27585395 27586368 0.000000e+00 1254.0
2 TraesCS6B01G108000 chr6B 80.512 508 61 18 1 475 43808871 43808369 6.130000e-94 355.0
3 TraesCS6B01G108000 chr6B 80.512 508 61 18 1 475 43850522 43850020 6.130000e-94 355.0
4 TraesCS6B01G108000 chr6B 80.315 508 61 18 1 475 43831074 43830573 1.030000e-91 348.0
5 TraesCS6B01G108000 chr6B 89.266 177 14 5 7 178 130298067 130297891 3.020000e-52 217.0
6 TraesCS6B01G108000 chr6A 91.695 1469 72 19 474 1904 49152459 49151003 0.000000e+00 1991.0
7 TraesCS6B01G108000 chr6A 90.174 977 82 9 4009 4976 235486120 235487091 0.000000e+00 1260.0
8 TraesCS6B01G108000 chr6A 88.407 854 52 15 3190 4009 49149815 49148975 0.000000e+00 985.0
9 TraesCS6B01G108000 chr6A 92.580 283 19 2 1901 2182 502928588 502928307 6.000000e-109 405.0
10 TraesCS6B01G108000 chr6A 88.353 249 22 6 2761 3003 49150484 49150237 4.880000e-75 292.0
11 TraesCS6B01G108000 chr6A 90.052 191 14 5 1 186 2958679 2958489 4.980000e-60 243.0
12 TraesCS6B01G108000 chr6A 89.189 185 15 5 1 180 549446164 549446348 5.020000e-55 226.0
13 TraesCS6B01G108000 chr6A 88.710 186 17 3 3000 3183 49150155 49149972 1.800000e-54 224.0
14 TraesCS6B01G108000 chr6A 86.432 199 20 7 2 195 588043272 588043468 1.400000e-50 211.0
15 TraesCS6B01G108000 chr6D 91.598 1452 81 21 477 1904 37906288 37904854 0.000000e+00 1967.0
16 TraesCS6B01G108000 chr6D 89.306 692 34 12 3212 3881 37903580 37902907 0.000000e+00 832.0
17 TraesCS6B01G108000 chr6D 86.325 702 46 24 2177 2832 37904857 37904160 0.000000e+00 719.0
18 TraesCS6B01G108000 chr6D 96.850 254 8 0 2833 3086 37904080 37903827 4.610000e-115 425.0
19 TraesCS6B01G108000 chr6D 86.400 125 8 5 3894 4009 37902926 37902802 1.460000e-25 128.0
20 TraesCS6B01G108000 chr5A 90.900 978 75 9 4008 4976 584870252 584871224 0.000000e+00 1301.0
21 TraesCS6B01G108000 chr3B 90.408 980 79 10 4005 4976 5487382 5488354 0.000000e+00 1275.0
22 TraesCS6B01G108000 chr3B 89.463 987 82 15 4008 4979 807531973 807530994 0.000000e+00 1227.0
23 TraesCS6B01G108000 chr3B 91.438 292 24 1 1901 2192 187879704 187879414 2.790000e-107 399.0
24 TraesCS6B01G108000 chr4B 90.286 978 80 10 4008 4976 5024993 5025964 0.000000e+00 1266.0
25 TraesCS6B01G108000 chr4B 93.525 278 18 0 1900 2177 357999251 357999528 9.980000e-112 414.0
26 TraesCS6B01G108000 chr2B 90.266 976 78 12 4009 4975 793046259 793045292 0.000000e+00 1260.0
27 TraesCS6B01G108000 chr2B 89.827 983 82 12 4009 4981 32134807 32135781 0.000000e+00 1245.0
28 TraesCS6B01G108000 chr2B 92.014 288 22 1 1900 2187 27587021 27587307 2.160000e-108 403.0
29 TraesCS6B01G108000 chr2B 82.474 291 41 8 201 484 671768404 671768691 3.850000e-61 246.0
30 TraesCS6B01G108000 chr4A 89.725 983 85 10 4008 4981 5766219 5765244 0.000000e+00 1242.0
31 TraesCS6B01G108000 chr7A 93.214 280 18 1 1901 2180 664244890 664245168 1.290000e-110 411.0
32 TraesCS6B01G108000 chr2A 93.214 280 18 1 1901 2180 715927166 715927444 1.290000e-110 411.0
33 TraesCS6B01G108000 chr5B 92.832 279 19 1 1901 2179 687998681 687998958 2.160000e-108 403.0
34 TraesCS6B01G108000 chr5B 87.302 189 21 3 1 186 4553966 4554154 3.910000e-51 213.0
35 TraesCS6B01G108000 chr7B 91.724 290 23 1 1901 2189 283010826 283010537 7.770000e-108 401.0
36 TraesCS6B01G108000 chr7B 90.604 298 25 3 1880 2177 21313112 21312818 4.670000e-105 392.0
37 TraesCS6B01G108000 chr1B 80.691 492 69 13 1163 1635 431449025 431448541 4.740000e-95 359.0
38 TraesCS6B01G108000 chr1B 87.097 62 6 2 2935 2995 662005492 662005552 8.950000e-08 69.4
39 TraesCS6B01G108000 chr1B 89.796 49 3 2 2933 2980 662020586 662020633 1.500000e-05 62.1
40 TraesCS6B01G108000 chr1A 80.412 485 74 9 1163 1632 404503584 404504062 2.850000e-92 350.0
41 TraesCS6B01G108000 chr1A 91.667 48 2 2 2934 2980 571725045 571725091 1.160000e-06 65.8
42 TraesCS6B01G108000 chr1A 89.583 48 3 2 2934 2980 571737790 571737836 5.380000e-05 60.2
43 TraesCS6B01G108000 chr2D 79.959 489 81 15 1 474 74159769 74159283 1.330000e-90 344.0
44 TraesCS6B01G108000 chr2D 77.485 493 74 27 1 459 55318052 55317563 1.380000e-65 261.0
45 TraesCS6B01G108000 chrUn 79.452 511 67 20 2 476 94301831 94301323 1.340000e-85 327.0
46 TraesCS6B01G108000 chrUn 83.032 277 39 7 201 474 33903713 33903442 1.390000e-60 244.0
47 TraesCS6B01G108000 chrUn 83.212 274 38 7 201 471 365856622 365856890 1.390000e-60 244.0
48 TraesCS6B01G108000 chr1D 78.854 506 85 16 3214 3704 318881899 318881401 6.220000e-84 322.0
49 TraesCS6B01G108000 chr1D 77.733 494 53 25 1163 1635 318886378 318885921 2.980000e-62 250.0
50 TraesCS6B01G108000 chr1D 85.246 61 6 3 2934 2992 475913521 475913580 5.380000e-05 60.2
51 TraesCS6B01G108000 chr5D 85.036 274 36 4 203 471 20759004 20758731 1.770000e-69 274.0
52 TraesCS6B01G108000 chr4D 83.803 284 39 7 198 476 55235296 55235577 3.820000e-66 263.0
53 TraesCS6B01G108000 chr4D 82.534 292 40 10 190 475 70997096 70997382 3.850000e-61 246.0
54 TraesCS6B01G108000 chr3A 83.219 292 38 7 193 476 471580181 471580469 1.780000e-64 257.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G108000 chr6B 88652306 88657286 4980 True 9199.0 9199 100.00000 1 4981 1 chr6B.!!$R4 4980
1 TraesCS6B01G108000 chr6B 27585395 27586368 973 False 1254.0 1254 90.02000 4009 4981 1 chr6B.!!$F1 972
2 TraesCS6B01G108000 chr6B 43808369 43808871 502 True 355.0 355 80.51200 1 475 1 chr6B.!!$R1 474
3 TraesCS6B01G108000 chr6B 43850020 43850522 502 True 355.0 355 80.51200 1 475 1 chr6B.!!$R3 474
4 TraesCS6B01G108000 chr6B 43830573 43831074 501 True 348.0 348 80.31500 1 475 1 chr6B.!!$R2 474
5 TraesCS6B01G108000 chr6A 235486120 235487091 971 False 1260.0 1260 90.17400 4009 4976 1 chr6A.!!$F1 967
6 TraesCS6B01G108000 chr6A 49148975 49152459 3484 True 873.0 1991 89.29125 474 4009 4 chr6A.!!$R3 3535
7 TraesCS6B01G108000 chr6D 37902802 37906288 3486 True 814.2 1967 90.09580 477 4009 5 chr6D.!!$R1 3532
8 TraesCS6B01G108000 chr5A 584870252 584871224 972 False 1301.0 1301 90.90000 4008 4976 1 chr5A.!!$F1 968
9 TraesCS6B01G108000 chr3B 5487382 5488354 972 False 1275.0 1275 90.40800 4005 4976 1 chr3B.!!$F1 971
10 TraesCS6B01G108000 chr3B 807530994 807531973 979 True 1227.0 1227 89.46300 4008 4979 1 chr3B.!!$R2 971
11 TraesCS6B01G108000 chr4B 5024993 5025964 971 False 1266.0 1266 90.28600 4008 4976 1 chr4B.!!$F1 968
12 TraesCS6B01G108000 chr2B 793045292 793046259 967 True 1260.0 1260 90.26600 4009 4975 1 chr2B.!!$R1 966
13 TraesCS6B01G108000 chr2B 32134807 32135781 974 False 1245.0 1245 89.82700 4009 4981 1 chr2B.!!$F2 972
14 TraesCS6B01G108000 chr4A 5765244 5766219 975 True 1242.0 1242 89.72500 4008 4981 1 chr4A.!!$R1 973
15 TraesCS6B01G108000 chrUn 94301323 94301831 508 True 327.0 327 79.45200 2 476 1 chrUn.!!$R2 474

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
471 507 0.250166 ACGTACGAGCCCTTTTGCTT 60.250 50.0 24.41 0.0 42.95 3.91 F
1126 1204 0.098200 CCTCGATCGTCGTGTAAGCA 59.902 55.0 15.94 0.0 41.35 3.91 F
2521 2803 0.038166 TTGACAGATTCAGGTGGGGC 59.962 55.0 0.00 0.0 34.94 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2170 2263 0.108207 GTCATGGATCCTCAGGCTGG 59.892 60.0 15.73 5.31 0.00 4.85 R
3105 3587 0.250640 ACTGTTGCTGCTCTCCCAAG 60.251 55.0 0.00 0.00 0.00 3.61 R
4331 5032 0.241749 TCGGCTACATCGACAAACGT 59.758 50.0 0.00 0.00 43.13 3.99 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.668135 TGTCCATGAATTGGGAATATCCT 57.332 39.130 0.00 0.00 46.45 3.24
24 25 6.778542 TGTCCATGAATTGGGAATATCCTA 57.221 37.500 0.00 0.00 46.45 2.94
58 60 9.843334 AAAAACTGTTCGTGACTTACAAAATAA 57.157 25.926 0.00 0.00 0.00 1.40
91 94 6.509317 TCAAAAATGTTCGCTCATTCAAAC 57.491 33.333 5.62 0.00 37.09 2.93
102 105 4.206404 CGCTCATTCAAACAATGATCATGC 59.794 41.667 9.46 2.66 38.03 4.06
106 109 7.516785 GCTCATTCAAACAATGATCATGCATTC 60.517 37.037 9.46 0.00 38.03 2.67
127 132 9.810231 GCATTCAAAAATGTTCGTTAAATCAAT 57.190 25.926 0.63 0.00 43.54 2.57
181 186 6.402011 CCACCAATTTCCATAAAAATGTTCGC 60.402 38.462 0.00 0.00 0.00 4.70
186 191 4.545823 TCCATAAAAATGTTCGCCGATC 57.454 40.909 0.00 0.00 0.00 3.69
187 192 3.314080 TCCATAAAAATGTTCGCCGATCC 59.686 43.478 0.00 0.00 0.00 3.36
192 197 2.332063 AATGTTCGCCGATCCAAGAT 57.668 45.000 0.00 0.00 0.00 2.40
193 198 2.332063 ATGTTCGCCGATCCAAGATT 57.668 45.000 0.00 0.00 0.00 2.40
194 199 2.107950 TGTTCGCCGATCCAAGATTT 57.892 45.000 0.00 0.00 0.00 2.17
195 200 3.254470 TGTTCGCCGATCCAAGATTTA 57.746 42.857 0.00 0.00 0.00 1.40
196 201 3.601435 TGTTCGCCGATCCAAGATTTAA 58.399 40.909 0.00 0.00 0.00 1.52
199 229 4.875544 TCGCCGATCCAAGATTTAAAAG 57.124 40.909 0.00 0.00 0.00 2.27
301 334 6.693545 AGCGTTCACGAATTTGAAAAATGTTA 59.306 30.769 2.87 0.00 43.02 2.41
308 341 9.498433 CACGAATTTGAAAAATGTTAACGATTC 57.502 29.630 0.00 3.77 0.00 2.52
309 342 9.239002 ACGAATTTGAAAAATGTTAACGATTCA 57.761 25.926 0.00 6.17 0.00 2.57
310 343 9.712410 CGAATTTGAAAAATGTTAACGATTCAG 57.288 29.630 0.26 0.00 0.00 3.02
312 345 9.541143 AATTTGAAAAATGTTAACGATTCAGGT 57.459 25.926 0.26 0.35 0.00 4.00
315 348 9.619316 TTGAAAAATGTTAACGATTCAGGTATG 57.381 29.630 0.26 0.00 0.00 2.39
316 349 8.788806 TGAAAAATGTTAACGATTCAGGTATGT 58.211 29.630 0.26 0.00 0.00 2.29
317 350 8.964420 AAAAATGTTAACGATTCAGGTATGTG 57.036 30.769 0.26 0.00 0.00 3.21
318 351 5.734855 ATGTTAACGATTCAGGTATGTGC 57.265 39.130 0.26 0.00 0.00 4.57
319 352 4.570930 TGTTAACGATTCAGGTATGTGCA 58.429 39.130 0.26 0.00 0.00 4.57
320 353 4.390603 TGTTAACGATTCAGGTATGTGCAC 59.609 41.667 10.75 10.75 0.00 4.57
321 354 1.640428 ACGATTCAGGTATGTGCACG 58.360 50.000 13.13 0.00 0.00 5.34
322 355 1.203758 ACGATTCAGGTATGTGCACGA 59.796 47.619 13.13 0.00 0.00 4.35
323 356 1.854743 CGATTCAGGTATGTGCACGAG 59.145 52.381 13.13 0.00 0.00 4.18
331 366 5.527951 TCAGGTATGTGCACGAGTTTAAAAA 59.472 36.000 13.13 0.00 0.00 1.94
384 419 9.676861 TGATTTCATGAAATTGAGAGTGATAGT 57.323 29.630 29.44 7.83 40.77 2.12
395 430 5.133941 TGAGAGTGATAGTGTATCTGGGTC 58.866 45.833 0.00 0.00 36.17 4.46
410 445 4.790937 TCTGGGTCATGCAGCAAAATATA 58.209 39.130 0.00 0.00 0.00 0.86
424 459 5.834742 AGCAAAATATAGTCATGGCCATTGA 59.165 36.000 17.92 14.39 0.00 2.57
430 465 9.812347 AAATATAGTCATGGCCATTGAAGATTA 57.188 29.630 17.92 11.71 0.00 1.75
455 491 1.757682 TTTTTCTCCCAGTGCAACGT 58.242 45.000 0.00 0.00 45.86 3.99
459 495 1.174078 TCTCCCAGTGCAACGTACGA 61.174 55.000 24.41 0.00 45.86 3.43
460 496 0.732880 CTCCCAGTGCAACGTACGAG 60.733 60.000 24.41 14.85 45.86 4.18
471 507 0.250166 ACGTACGAGCCCTTTTGCTT 60.250 50.000 24.41 0.00 42.95 3.91
485 521 6.704050 GCCCTTTTGCTTGTAAGTTTAATTCA 59.296 34.615 0.00 0.00 0.00 2.57
586 626 5.404366 TCCTTCGTTCTAAACAAAGATCACG 59.596 40.000 0.00 0.00 33.20 4.35
596 639 5.840940 AACAAAGATCACGTTACTAGTGC 57.159 39.130 5.39 0.00 39.31 4.40
652 697 2.283086 TGCGCGAATCTTATACAAACGG 59.717 45.455 12.10 0.00 0.00 4.44
794 839 1.196911 CCATGACCCAAACCATGCAT 58.803 50.000 0.00 0.00 38.95 3.96
817 862 3.864921 GCCGTAGTGAGAAAATGACCACT 60.865 47.826 0.00 0.00 41.98 4.00
930 979 0.320946 TGCTAACCAAGTACGTGCCC 60.321 55.000 2.94 0.00 0.00 5.36
988 1041 8.095792 TCCCTCACTTATATAACTCGTCTCTAG 58.904 40.741 0.00 0.00 0.00 2.43
989 1042 7.879160 CCCTCACTTATATAACTCGTCTCTAGT 59.121 40.741 0.00 0.00 0.00 2.57
1024 1102 4.402155 TGACACAAAATCTTGCTCAACCTT 59.598 37.500 0.00 0.00 35.84 3.50
1125 1203 0.098376 ACCTCGATCGTCGTGTAAGC 59.902 55.000 15.94 0.00 41.35 3.09
1126 1204 0.098200 CCTCGATCGTCGTGTAAGCA 59.902 55.000 15.94 0.00 41.35 3.91
1130 1208 2.095617 TCGATCGTCGTGTAAGCAAAGA 60.096 45.455 15.94 0.00 41.35 2.52
1173 1251 1.773391 CCTGCCAGGAGGGATGGAT 60.773 63.158 4.15 0.00 40.51 3.41
1332 1410 3.181967 CTGCAGCACTACGGCGTC 61.182 66.667 19.21 0.93 43.16 5.19
1793 1886 1.100510 AGCGACGTATAGCCAAGTCA 58.899 50.000 6.53 0.00 33.56 3.41
1795 1888 1.787155 GCGACGTATAGCCAAGTCATG 59.213 52.381 0.00 0.00 33.56 3.07
1813 1906 4.525949 GGACGCTACGGGGAAGGC 62.526 72.222 0.00 0.00 0.00 4.35
1815 1908 4.078516 ACGCTACGGGGAAGGCAC 62.079 66.667 0.00 0.00 0.00 5.01
1818 1911 2.267961 CTACGGGGAAGGCACACC 59.732 66.667 0.00 0.00 0.00 4.16
1819 1912 2.527123 TACGGGGAAGGCACACCA 60.527 61.111 4.08 0.00 39.06 4.17
1820 1913 2.798148 CTACGGGGAAGGCACACCAC 62.798 65.000 4.08 0.00 39.06 4.16
1887 1980 4.754311 TGTCGGGTATATGGGGAGATTAA 58.246 43.478 0.00 0.00 0.00 1.40
1904 1997 7.393796 GGGAGATTAATATAAGACTCGGTGAGA 59.606 40.741 0.00 0.00 33.32 3.27
1905 1998 8.238631 GGAGATTAATATAAGACTCGGTGAGAC 58.761 40.741 0.00 0.00 33.32 3.36
1906 1999 8.927675 AGATTAATATAAGACTCGGTGAGACT 57.072 34.615 0.00 0.00 36.37 3.24
1907 2000 8.788806 AGATTAATATAAGACTCGGTGAGACTG 58.211 37.037 0.00 0.00 35.20 3.51
1908 2001 5.776173 AATATAAGACTCGGTGAGACTGG 57.224 43.478 0.00 0.00 35.20 4.00
1909 2002 2.581216 TAAGACTCGGTGAGACTGGT 57.419 50.000 0.00 0.00 35.20 4.00
1910 2003 1.249407 AAGACTCGGTGAGACTGGTC 58.751 55.000 0.00 0.00 35.20 4.02
1911 2004 0.110678 AGACTCGGTGAGACTGGTCA 59.889 55.000 0.00 0.00 33.91 4.02
1912 2005 0.241481 GACTCGGTGAGACTGGTCAC 59.759 60.000 0.00 4.35 45.30 3.67
1923 2016 2.452116 CTGGTCACAGTGGGAAGGA 58.548 57.895 0.00 0.00 39.92 3.36
1924 2017 0.764890 CTGGTCACAGTGGGAAGGAA 59.235 55.000 0.00 0.00 39.92 3.36
1925 2018 0.472471 TGGTCACAGTGGGAAGGAAC 59.528 55.000 0.00 0.00 0.00 3.62
1926 2019 3.878774 CTGGTCACAGTGGGAAGGAACT 61.879 54.545 0.00 0.00 39.60 3.01
1927 2020 5.333199 CTGGTCACAGTGGGAAGGAACTT 62.333 52.174 0.00 0.00 45.91 2.66
1928 2021 6.024982 CTGGTCACAGTGGGAAGGAACTTA 62.025 50.000 0.00 0.00 44.30 2.24
1929 2022 7.762128 CTGGTCACAGTGGGAAGGAACTTAG 62.762 52.000 0.00 0.00 44.30 2.18
1943 2036 6.038997 AGGAACTTAGGAGTAACATCACAC 57.961 41.667 0.00 0.00 34.21 3.82
1944 2037 5.542635 AGGAACTTAGGAGTAACATCACACA 59.457 40.000 0.00 0.00 34.21 3.72
1945 2038 5.638234 GGAACTTAGGAGTAACATCACACAC 59.362 44.000 0.00 0.00 34.21 3.82
1946 2039 6.420913 AACTTAGGAGTAACATCACACACT 57.579 37.500 0.00 0.00 34.21 3.55
1947 2040 6.026947 ACTTAGGAGTAACATCACACACTC 57.973 41.667 0.00 0.00 37.32 3.51
1953 2046 6.648725 GAGTAACATCACACACTCCAATAC 57.351 41.667 0.00 0.00 32.93 1.89
1954 2047 6.109156 AGTAACATCACACACTCCAATACA 57.891 37.500 0.00 0.00 0.00 2.29
1955 2048 6.530120 AGTAACATCACACACTCCAATACAA 58.470 36.000 0.00 0.00 0.00 2.41
1956 2049 5.689383 AACATCACACACTCCAATACAAC 57.311 39.130 0.00 0.00 0.00 3.32
1957 2050 4.973168 ACATCACACACTCCAATACAACT 58.027 39.130 0.00 0.00 0.00 3.16
1958 2051 5.376625 ACATCACACACTCCAATACAACTT 58.623 37.500 0.00 0.00 0.00 2.66
1959 2052 5.827797 ACATCACACACTCCAATACAACTTT 59.172 36.000 0.00 0.00 0.00 2.66
1960 2053 5.749596 TCACACACTCCAATACAACTTTG 57.250 39.130 0.00 0.00 0.00 2.77
1961 2054 4.036262 TCACACACTCCAATACAACTTTGC 59.964 41.667 0.00 0.00 0.00 3.68
1962 2055 4.036734 CACACACTCCAATACAACTTTGCT 59.963 41.667 0.00 0.00 0.00 3.91
1963 2056 4.644685 ACACACTCCAATACAACTTTGCTT 59.355 37.500 0.00 0.00 0.00 3.91
1964 2057 5.825679 ACACACTCCAATACAACTTTGCTTA 59.174 36.000 0.00 0.00 0.00 3.09
1965 2058 6.490040 ACACACTCCAATACAACTTTGCTTAT 59.510 34.615 0.00 0.00 0.00 1.73
1966 2059 6.803320 CACACTCCAATACAACTTTGCTTATG 59.197 38.462 0.00 0.00 0.00 1.90
1967 2060 6.490040 ACACTCCAATACAACTTTGCTTATGT 59.510 34.615 0.00 0.00 0.00 2.29
1968 2061 6.803320 CACTCCAATACAACTTTGCTTATGTG 59.197 38.462 0.00 0.00 0.00 3.21
1969 2062 5.708948 TCCAATACAACTTTGCTTATGTGC 58.291 37.500 0.00 0.00 0.00 4.57
1970 2063 4.864247 CCAATACAACTTTGCTTATGTGCC 59.136 41.667 0.00 0.00 0.00 5.01
1971 2064 5.468592 CAATACAACTTTGCTTATGTGCCA 58.531 37.500 0.00 0.00 0.00 4.92
1972 2065 3.369546 ACAACTTTGCTTATGTGCCAC 57.630 42.857 0.00 0.00 0.00 5.01
1973 2066 2.287547 ACAACTTTGCTTATGTGCCACG 60.288 45.455 0.00 0.00 0.00 4.94
1974 2067 1.604604 ACTTTGCTTATGTGCCACGT 58.395 45.000 0.00 0.00 0.00 4.49
1975 2068 2.773487 ACTTTGCTTATGTGCCACGTA 58.227 42.857 0.00 0.00 0.00 3.57
1976 2069 3.343617 ACTTTGCTTATGTGCCACGTAT 58.656 40.909 0.00 0.00 0.00 3.06
1977 2070 3.756434 ACTTTGCTTATGTGCCACGTATT 59.244 39.130 0.00 0.00 0.00 1.89
1978 2071 4.217550 ACTTTGCTTATGTGCCACGTATTT 59.782 37.500 0.00 0.00 0.00 1.40
1979 2072 5.413213 ACTTTGCTTATGTGCCACGTATTTA 59.587 36.000 0.00 0.00 0.00 1.40
1980 2073 5.881777 TTGCTTATGTGCCACGTATTTAA 57.118 34.783 0.00 0.00 0.00 1.52
1981 2074 6.443934 TTGCTTATGTGCCACGTATTTAAT 57.556 33.333 0.00 0.00 0.00 1.40
1982 2075 5.815850 TGCTTATGTGCCACGTATTTAATG 58.184 37.500 0.00 0.00 0.00 1.90
1983 2076 5.586643 TGCTTATGTGCCACGTATTTAATGA 59.413 36.000 0.00 0.00 0.00 2.57
1984 2077 6.262049 TGCTTATGTGCCACGTATTTAATGAT 59.738 34.615 0.00 0.00 0.00 2.45
1985 2078 7.442666 TGCTTATGTGCCACGTATTTAATGATA 59.557 33.333 0.00 0.00 0.00 2.15
1986 2079 8.286800 GCTTATGTGCCACGTATTTAATGATAA 58.713 33.333 0.00 0.00 0.00 1.75
1987 2080 9.811655 CTTATGTGCCACGTATTTAATGATAAG 57.188 33.333 0.00 0.00 0.00 1.73
1988 2081 9.549078 TTATGTGCCACGTATTTAATGATAAGA 57.451 29.630 0.00 0.00 0.00 2.10
1989 2082 7.477144 TGTGCCACGTATTTAATGATAAGAG 57.523 36.000 0.00 0.00 0.00 2.85
1990 2083 7.269316 TGTGCCACGTATTTAATGATAAGAGA 58.731 34.615 0.00 0.00 0.00 3.10
1991 2084 7.438160 TGTGCCACGTATTTAATGATAAGAGAG 59.562 37.037 0.00 0.00 0.00 3.20
1992 2085 6.929049 TGCCACGTATTTAATGATAAGAGAGG 59.071 38.462 0.00 0.00 0.00 3.69
1993 2086 6.929606 GCCACGTATTTAATGATAAGAGAGGT 59.070 38.462 0.00 0.00 0.00 3.85
1994 2087 7.095607 GCCACGTATTTAATGATAAGAGAGGTG 60.096 40.741 0.00 0.00 0.00 4.00
1995 2088 7.926555 CCACGTATTTAATGATAAGAGAGGTGT 59.073 37.037 0.00 0.00 0.00 4.16
1996 2089 9.314321 CACGTATTTAATGATAAGAGAGGTGTT 57.686 33.333 0.00 0.00 0.00 3.32
1997 2090 9.886132 ACGTATTTAATGATAAGAGAGGTGTTT 57.114 29.630 0.00 0.00 0.00 2.83
2001 2094 7.921786 TTAATGATAAGAGAGGTGTTTGTGG 57.078 36.000 0.00 0.00 0.00 4.17
2002 2095 4.974645 TGATAAGAGAGGTGTTTGTGGT 57.025 40.909 0.00 0.00 0.00 4.16
2003 2096 6.620877 ATGATAAGAGAGGTGTTTGTGGTA 57.379 37.500 0.00 0.00 0.00 3.25
2004 2097 6.428083 TGATAAGAGAGGTGTTTGTGGTAA 57.572 37.500 0.00 0.00 0.00 2.85
2005 2098 6.228258 TGATAAGAGAGGTGTTTGTGGTAAC 58.772 40.000 0.00 0.00 0.00 2.50
2006 2099 4.772886 AAGAGAGGTGTTTGTGGTAACT 57.227 40.909 0.00 0.00 37.61 2.24
2007 2100 5.881923 AAGAGAGGTGTTTGTGGTAACTA 57.118 39.130 0.00 0.00 37.61 2.24
2008 2101 5.470047 AGAGAGGTGTTTGTGGTAACTAG 57.530 43.478 0.00 0.00 37.61 2.57
2009 2102 3.995048 GAGAGGTGTTTGTGGTAACTAGC 59.005 47.826 0.00 0.00 37.61 3.42
2010 2103 3.646637 AGAGGTGTTTGTGGTAACTAGCT 59.353 43.478 0.00 0.00 37.61 3.32
2011 2104 4.836736 AGAGGTGTTTGTGGTAACTAGCTA 59.163 41.667 0.00 0.00 37.61 3.32
2012 2105 5.306160 AGAGGTGTTTGTGGTAACTAGCTAA 59.694 40.000 0.00 0.00 37.61 3.09
2013 2106 5.548406 AGGTGTTTGTGGTAACTAGCTAAG 58.452 41.667 0.00 0.00 37.61 2.18
2014 2107 5.071384 AGGTGTTTGTGGTAACTAGCTAAGT 59.929 40.000 0.00 0.00 41.49 2.24
2016 2109 6.930722 GGTGTTTGTGGTAACTAGCTAAGTTA 59.069 38.462 10.09 10.09 46.85 2.24
2028 2121 8.934507 AACTAGCTAAGTTATCAGAACATCAC 57.065 34.615 0.00 0.00 46.85 3.06
2029 2122 8.067751 ACTAGCTAAGTTATCAGAACATCACA 57.932 34.615 0.00 0.00 33.35 3.58
2030 2123 7.976734 ACTAGCTAAGTTATCAGAACATCACAC 59.023 37.037 0.00 0.00 33.35 3.82
2031 2124 6.701340 AGCTAAGTTATCAGAACATCACACA 58.299 36.000 0.00 0.00 0.00 3.72
2032 2125 6.591834 AGCTAAGTTATCAGAACATCACACAC 59.408 38.462 0.00 0.00 0.00 3.82
2033 2126 6.591834 GCTAAGTTATCAGAACATCACACACT 59.408 38.462 0.00 0.00 0.00 3.55
2034 2127 7.118390 GCTAAGTTATCAGAACATCACACACTT 59.882 37.037 0.00 0.00 0.00 3.16
2035 2128 7.426929 AAGTTATCAGAACATCACACACTTC 57.573 36.000 0.00 0.00 0.00 3.01
2036 2129 6.524734 AGTTATCAGAACATCACACACTTCA 58.475 36.000 0.00 0.00 0.00 3.02
2037 2130 6.992123 AGTTATCAGAACATCACACACTTCAA 59.008 34.615 0.00 0.00 0.00 2.69
2038 2131 7.498900 AGTTATCAGAACATCACACACTTCAAA 59.501 33.333 0.00 0.00 0.00 2.69
2039 2132 6.698008 ATCAGAACATCACACACTTCAAAA 57.302 33.333 0.00 0.00 0.00 2.44
2040 2133 6.507958 TCAGAACATCACACACTTCAAAAA 57.492 33.333 0.00 0.00 0.00 1.94
2081 2174 9.353431 ACCTAATAAATACATCATTGCATGACA 57.647 29.630 0.00 0.00 43.01 3.58
2082 2175 9.616634 CCTAATAAATACATCATTGCATGACAC 57.383 33.333 0.00 0.00 43.01 3.67
2086 2179 7.628769 AAATACATCATTGCATGACACTACA 57.371 32.000 0.00 0.00 43.01 2.74
2087 2180 7.812690 AATACATCATTGCATGACACTACAT 57.187 32.000 0.00 0.00 43.01 2.29
2088 2181 8.907222 AATACATCATTGCATGACACTACATA 57.093 30.769 0.00 0.00 43.01 2.29
2089 2182 6.856135 ACATCATTGCATGACACTACATAG 57.144 37.500 0.00 0.00 43.01 2.23
2090 2183 6.585416 ACATCATTGCATGACACTACATAGA 58.415 36.000 0.00 0.00 43.01 1.98
2091 2184 7.222161 ACATCATTGCATGACACTACATAGAT 58.778 34.615 0.00 0.00 43.01 1.98
2092 2185 7.172703 ACATCATTGCATGACACTACATAGATG 59.827 37.037 0.00 0.00 43.01 2.90
2093 2186 6.585416 TCATTGCATGACACTACATAGATGT 58.415 36.000 0.00 0.08 38.37 3.06
2094 2187 7.049754 TCATTGCATGACACTACATAGATGTT 58.950 34.615 0.00 0.00 36.98 2.71
2095 2188 7.553760 TCATTGCATGACACTACATAGATGTTT 59.446 33.333 0.00 0.00 36.98 2.83
2096 2189 6.908870 TGCATGACACTACATAGATGTTTC 57.091 37.500 0.00 0.00 41.97 2.78
2097 2190 6.643388 TGCATGACACTACATAGATGTTTCT 58.357 36.000 0.00 0.00 41.97 2.52
2098 2191 7.781056 TGCATGACACTACATAGATGTTTCTA 58.219 34.615 0.00 0.00 41.97 2.10
2099 2192 8.424133 TGCATGACACTACATAGATGTTTCTAT 58.576 33.333 0.00 0.00 44.39 1.98
2100 2193 9.265901 GCATGACACTACATAGATGTTTCTATT 57.734 33.333 0.00 0.00 41.47 1.73
2103 2196 9.803315 TGACACTACATAGATGTTTCTATTCAC 57.197 33.333 0.00 0.00 41.47 3.18
2110 2203 8.378565 ACATAGATGTTTCTATTCACTATGGGG 58.621 37.037 0.81 0.00 41.47 4.96
2111 2204 6.192970 AGATGTTTCTATTCACTATGGGGG 57.807 41.667 0.00 0.00 0.00 5.40
2112 2205 5.672194 AGATGTTTCTATTCACTATGGGGGT 59.328 40.000 0.00 0.00 0.00 4.95
2113 2206 6.849697 AGATGTTTCTATTCACTATGGGGGTA 59.150 38.462 0.00 0.00 0.00 3.69
2114 2207 6.494666 TGTTTCTATTCACTATGGGGGTAG 57.505 41.667 0.00 0.00 0.00 3.18
2115 2208 5.968167 TGTTTCTATTCACTATGGGGGTAGT 59.032 40.000 0.00 0.00 35.34 2.73
2116 2209 7.134162 TGTTTCTATTCACTATGGGGGTAGTA 58.866 38.462 0.00 0.00 33.29 1.82
2117 2210 7.624478 TGTTTCTATTCACTATGGGGGTAGTAA 59.376 37.037 0.00 0.00 33.29 2.24
2118 2211 7.607615 TTCTATTCACTATGGGGGTAGTAAC 57.392 40.000 0.00 0.00 33.29 2.50
2119 2212 6.685541 TCTATTCACTATGGGGGTAGTAACA 58.314 40.000 0.00 0.00 33.29 2.41
2120 2213 7.310634 TCTATTCACTATGGGGGTAGTAACAT 58.689 38.462 0.00 0.00 33.29 2.71
2121 2214 8.458575 TCTATTCACTATGGGGGTAGTAACATA 58.541 37.037 0.00 0.00 33.29 2.29
2122 2215 6.989155 TTCACTATGGGGGTAGTAACATAG 57.011 41.667 8.52 8.52 45.07 2.23
2127 2220 7.941431 CTATGGGGGTAGTAACATAGTCTAG 57.059 44.000 0.00 0.00 38.48 2.43
2128 2221 5.070823 TGGGGGTAGTAACATAGTCTAGG 57.929 47.826 0.00 0.00 0.00 3.02
2129 2222 4.140853 TGGGGGTAGTAACATAGTCTAGGG 60.141 50.000 0.00 0.00 0.00 3.53
2130 2223 4.106987 GGGGGTAGTAACATAGTCTAGGGA 59.893 50.000 0.00 0.00 0.00 4.20
2131 2224 5.323581 GGGGTAGTAACATAGTCTAGGGAG 58.676 50.000 0.00 0.00 0.00 4.30
2132 2225 5.323581 GGGTAGTAACATAGTCTAGGGAGG 58.676 50.000 0.00 0.00 0.00 4.30
2133 2226 5.163001 GGGTAGTAACATAGTCTAGGGAGGT 60.163 48.000 0.00 0.00 0.00 3.85
2134 2227 5.769162 GGTAGTAACATAGTCTAGGGAGGTG 59.231 48.000 0.00 0.00 0.00 4.00
2135 2228 5.469210 AGTAACATAGTCTAGGGAGGTGT 57.531 43.478 0.00 0.00 0.00 4.16
2136 2229 5.202004 AGTAACATAGTCTAGGGAGGTGTG 58.798 45.833 0.00 0.00 0.00 3.82
2137 2230 3.759815 ACATAGTCTAGGGAGGTGTGT 57.240 47.619 0.00 0.00 0.00 3.72
2138 2231 4.875578 ACATAGTCTAGGGAGGTGTGTA 57.124 45.455 0.00 0.00 0.00 2.90
2139 2232 5.202746 ACATAGTCTAGGGAGGTGTGTAA 57.797 43.478 0.00 0.00 0.00 2.41
2140 2233 5.202004 ACATAGTCTAGGGAGGTGTGTAAG 58.798 45.833 0.00 0.00 0.00 2.34
2141 2234 3.829728 AGTCTAGGGAGGTGTGTAAGT 57.170 47.619 0.00 0.00 0.00 2.24
2142 2235 4.129317 AGTCTAGGGAGGTGTGTAAGTT 57.871 45.455 0.00 0.00 0.00 2.66
2143 2236 3.833070 AGTCTAGGGAGGTGTGTAAGTTG 59.167 47.826 0.00 0.00 0.00 3.16
2144 2237 2.565834 TCTAGGGAGGTGTGTAAGTTGC 59.434 50.000 0.00 0.00 0.00 4.17
2145 2238 1.435256 AGGGAGGTGTGTAAGTTGCT 58.565 50.000 0.00 0.00 0.00 3.91
2146 2239 2.616524 AGGGAGGTGTGTAAGTTGCTA 58.383 47.619 0.00 0.00 0.00 3.49
2147 2240 2.567615 AGGGAGGTGTGTAAGTTGCTAG 59.432 50.000 0.00 0.00 0.00 3.42
2148 2241 2.347731 GGAGGTGTGTAAGTTGCTAGC 58.652 52.381 8.10 8.10 0.00 3.42
2149 2242 2.028020 GGAGGTGTGTAAGTTGCTAGCT 60.028 50.000 17.23 0.00 0.00 3.32
2150 2243 3.557264 GGAGGTGTGTAAGTTGCTAGCTT 60.557 47.826 17.23 4.51 0.00 3.74
2151 2244 4.322499 GGAGGTGTGTAAGTTGCTAGCTTA 60.322 45.833 17.23 3.44 0.00 3.09
2152 2245 5.420409 GAGGTGTGTAAGTTGCTAGCTTAT 58.580 41.667 17.23 2.28 32.01 1.73
2153 2246 5.178797 AGGTGTGTAAGTTGCTAGCTTATG 58.821 41.667 17.23 0.00 32.01 1.90
2154 2247 4.935808 GGTGTGTAAGTTGCTAGCTTATGT 59.064 41.667 17.23 0.06 32.01 2.29
2155 2248 5.411669 GGTGTGTAAGTTGCTAGCTTATGTT 59.588 40.000 17.23 5.09 32.01 2.71
2156 2249 6.402226 GGTGTGTAAGTTGCTAGCTTATGTTC 60.402 42.308 17.23 2.19 32.01 3.18
2157 2250 6.369065 GTGTGTAAGTTGCTAGCTTATGTTCT 59.631 38.462 17.23 1.20 32.01 3.01
2158 2251 6.934645 TGTGTAAGTTGCTAGCTTATGTTCTT 59.065 34.615 17.23 11.23 32.01 2.52
2159 2252 7.095229 TGTGTAAGTTGCTAGCTTATGTTCTTG 60.095 37.037 17.23 0.00 32.01 3.02
2160 2253 4.954092 AGTTGCTAGCTTATGTTCTTGC 57.046 40.909 17.23 0.00 0.00 4.01
2161 2254 3.691609 AGTTGCTAGCTTATGTTCTTGCC 59.308 43.478 17.23 0.00 31.68 4.52
2162 2255 2.643551 TGCTAGCTTATGTTCTTGCCC 58.356 47.619 17.23 0.00 31.68 5.36
2163 2256 2.026356 TGCTAGCTTATGTTCTTGCCCA 60.026 45.455 17.23 0.00 31.68 5.36
2164 2257 3.217626 GCTAGCTTATGTTCTTGCCCAT 58.782 45.455 7.70 0.00 0.00 4.00
2165 2258 3.633986 GCTAGCTTATGTTCTTGCCCATT 59.366 43.478 7.70 0.00 0.00 3.16
2166 2259 4.821805 GCTAGCTTATGTTCTTGCCCATTA 59.178 41.667 7.70 0.00 0.00 1.90
2167 2260 5.474876 GCTAGCTTATGTTCTTGCCCATTAT 59.525 40.000 7.70 0.00 0.00 1.28
2168 2261 6.655003 GCTAGCTTATGTTCTTGCCCATTATA 59.345 38.462 7.70 0.00 0.00 0.98
2169 2262 7.174946 GCTAGCTTATGTTCTTGCCCATTATAA 59.825 37.037 7.70 0.00 0.00 0.98
2170 2263 7.277174 AGCTTATGTTCTTGCCCATTATAAC 57.723 36.000 0.00 0.00 0.00 1.89
2171 2264 6.265422 AGCTTATGTTCTTGCCCATTATAACC 59.735 38.462 0.00 0.00 0.00 2.85
2172 2265 6.040391 GCTTATGTTCTTGCCCATTATAACCA 59.960 38.462 0.00 0.00 0.00 3.67
2173 2266 7.581213 TTATGTTCTTGCCCATTATAACCAG 57.419 36.000 0.00 0.00 0.00 4.00
2174 2267 3.699038 TGTTCTTGCCCATTATAACCAGC 59.301 43.478 0.00 0.00 0.00 4.85
2175 2268 2.944129 TCTTGCCCATTATAACCAGCC 58.056 47.619 0.00 0.00 0.00 4.85
2176 2269 2.513738 TCTTGCCCATTATAACCAGCCT 59.486 45.455 0.00 0.00 0.00 4.58
2177 2270 2.363306 TGCCCATTATAACCAGCCTG 57.637 50.000 0.00 0.00 0.00 4.85
2178 2271 1.849692 TGCCCATTATAACCAGCCTGA 59.150 47.619 0.00 0.00 0.00 3.86
2179 2272 2.158623 TGCCCATTATAACCAGCCTGAG 60.159 50.000 0.00 0.00 0.00 3.35
2190 2283 1.129917 CAGCCTGAGGATCCATGACT 58.870 55.000 15.82 1.29 0.00 3.41
2198 2291 6.597280 GCCTGAGGATCCATGACTTTATAATC 59.403 42.308 15.82 0.00 0.00 1.75
2211 2484 4.328983 ACTTTATAATCAGTCGTGTTGGCG 59.671 41.667 0.00 0.00 0.00 5.69
2218 2491 1.531149 CAGTCGTGTTGGCGATTCTTT 59.469 47.619 0.00 0.00 43.07 2.52
2227 2500 4.022416 TGTTGGCGATTCTTTATGTGCTTT 60.022 37.500 0.00 0.00 0.00 3.51
2228 2501 4.782019 TGGCGATTCTTTATGTGCTTTT 57.218 36.364 0.00 0.00 0.00 2.27
2255 2528 1.128188 AAGGAACCAACGAGAGCCCT 61.128 55.000 0.00 0.00 0.00 5.19
2272 2545 2.294512 GCCCTGCCTTTTCATATAGTGC 59.705 50.000 0.00 0.00 0.00 4.40
2275 2548 4.037208 CCCTGCCTTTTCATATAGTGCAAG 59.963 45.833 0.00 0.00 0.00 4.01
2294 2567 4.157840 GCAAGTAAGGAATTGTACAAGGGG 59.842 45.833 14.65 0.00 0.00 4.79
2300 2573 4.810345 AGGAATTGTACAAGGGGTGAAAA 58.190 39.130 14.65 0.00 0.00 2.29
2305 2578 8.151596 GGAATTGTACAAGGGGTGAAAATTTTA 58.848 33.333 14.65 0.00 0.00 1.52
2307 2580 7.663043 TTGTACAAGGGGTGAAAATTTTAGT 57.337 32.000 3.59 0.00 0.00 2.24
2320 2593 0.458669 TTTTAGTAGGGAGCTCGCCG 59.541 55.000 25.68 0.00 0.00 6.46
2358 2632 1.651987 AATCATGCGTCGGTCGAATT 58.348 45.000 0.00 0.00 42.86 2.17
2372 2647 1.086696 CGAATTTGTGCACCTCCGAT 58.913 50.000 15.69 0.00 0.00 4.18
2456 2731 4.292178 GCGATCCGGAGCTGAGGG 62.292 72.222 19.08 2.31 0.00 4.30
2469 2744 1.007038 TGAGGGCGTACAACGTGTC 60.007 57.895 0.00 0.00 44.73 3.67
2498 2780 2.722201 GCCGGTAGTGGGGAGTCTG 61.722 68.421 1.90 0.00 0.00 3.51
2507 2789 1.416401 GTGGGGAGTCTGAAGTTGACA 59.584 52.381 0.00 0.00 36.94 3.58
2521 2803 0.038166 TTGACAGATTCAGGTGGGGC 59.962 55.000 0.00 0.00 34.94 5.80
2542 2824 2.190578 GGGAAGGGTCATCAGCGG 59.809 66.667 0.00 0.00 0.00 5.52
2556 2838 2.890474 GCGGCCGAATCATGTCGT 60.890 61.111 33.48 0.00 39.43 4.34
2573 2855 3.244422 TGTCGTGGTTAGAGGAAATGCTT 60.244 43.478 0.00 0.00 0.00 3.91
2637 2919 0.461339 GGAGCAGGCGATTTTACCGA 60.461 55.000 0.00 0.00 0.00 4.69
2653 2935 2.836360 GACATCGGAGGGCGGGTA 60.836 66.667 0.00 0.00 0.00 3.69
2685 2975 2.548480 GAGGAAGAAGAAAACCGTGGTG 59.452 50.000 0.00 0.00 0.00 4.17
2688 2978 2.702592 AGAAGAAAACCGTGGTGTGA 57.297 45.000 0.00 0.00 0.00 3.58
2689 2979 2.993937 AGAAGAAAACCGTGGTGTGAA 58.006 42.857 0.00 0.00 0.00 3.18
2690 2980 3.551846 AGAAGAAAACCGTGGTGTGAAT 58.448 40.909 0.00 0.00 0.00 2.57
2691 2981 3.951680 AGAAGAAAACCGTGGTGTGAATT 59.048 39.130 0.00 0.00 0.00 2.17
2693 2983 5.591067 AGAAGAAAACCGTGGTGTGAATTAA 59.409 36.000 0.00 0.00 0.00 1.40
2694 2984 6.264518 AGAAGAAAACCGTGGTGTGAATTAAT 59.735 34.615 0.00 0.00 0.00 1.40
2695 2985 7.446013 AGAAGAAAACCGTGGTGTGAATTAATA 59.554 33.333 0.00 0.00 0.00 0.98
2696 2986 7.513371 AGAAAACCGTGGTGTGAATTAATAA 57.487 32.000 0.00 0.00 0.00 1.40
2731 3048 2.846193 GCTCAATAGCCGACCCAATAA 58.154 47.619 0.00 0.00 43.40 1.40
2732 3049 3.211045 GCTCAATAGCCGACCCAATAAA 58.789 45.455 0.00 0.00 43.40 1.40
2734 3051 4.097286 GCTCAATAGCCGACCCAATAAAAA 59.903 41.667 0.00 0.00 43.40 1.94
2823 3141 8.608844 ATTTGTTTGAGTTTCCTAGAGTACTG 57.391 34.615 0.00 0.00 0.00 2.74
2998 3395 1.285078 GCTCCAGGTTCCCAAGGTAAT 59.715 52.381 0.00 0.00 0.00 1.89
3028 3510 6.097839 TGGCTACTTATCAACTTCCGTCTATT 59.902 38.462 0.00 0.00 0.00 1.73
3099 3581 1.228154 GCTTTCTCCACCCCAACGT 60.228 57.895 0.00 0.00 0.00 3.99
3105 3587 1.571215 CTCCACCCCAACGTTTACGC 61.571 60.000 0.00 0.00 44.43 4.42
3126 3608 0.321671 TGGGAGAGCAGCAACAGTAC 59.678 55.000 0.00 0.00 0.00 2.73
3131 3615 4.054671 GGAGAGCAGCAACAGTACATATC 58.945 47.826 0.00 0.00 0.00 1.63
3167 3651 2.568062 TCAGCAACCCCGTAGTTTCATA 59.432 45.455 0.00 0.00 0.00 2.15
3173 3657 5.671493 CAACCCCGTAGTTTCATAGAAGAT 58.329 41.667 0.00 0.00 0.00 2.40
3174 3658 6.684613 GCAACCCCGTAGTTTCATAGAAGATA 60.685 42.308 0.00 0.00 0.00 1.98
3184 3668 8.443953 AGTTTCATAGAAGATAGGACATTTGC 57.556 34.615 0.00 0.00 0.00 3.68
3185 3669 8.049117 AGTTTCATAGAAGATAGGACATTTGCA 58.951 33.333 0.00 0.00 0.00 4.08
3186 3670 8.677300 GTTTCATAGAAGATAGGACATTTGCAA 58.323 33.333 0.00 0.00 0.00 4.08
3188 3672 8.985315 TCATAGAAGATAGGACATTTGCAAAT 57.015 30.769 18.99 18.99 0.00 2.32
3195 3833 8.297470 AGATAGGACATTTGCAAATTATGTGT 57.703 30.769 21.95 17.44 32.94 3.72
3196 3834 8.192774 AGATAGGACATTTGCAAATTATGTGTG 58.807 33.333 21.95 12.91 32.94 3.82
3249 3899 6.490566 TGACAATCTGAGTTTGTGATGATG 57.509 37.500 13.15 0.00 37.43 3.07
3266 3916 2.488937 TGATGAAACTGCGTGCATGATT 59.511 40.909 10.93 0.00 0.00 2.57
3267 3917 2.334971 TGAAACTGCGTGCATGATTG 57.665 45.000 10.93 0.81 0.00 2.67
3448 4116 2.436115 GCCACCGCTACCAACTCC 60.436 66.667 0.00 0.00 0.00 3.85
3454 4122 2.642254 CGCTACCAACTCCCCGACA 61.642 63.158 0.00 0.00 0.00 4.35
3576 4244 2.985847 AAGCTTCCAGGGCGTTGC 60.986 61.111 0.00 0.00 34.52 4.17
3638 4306 3.681835 AGACGAGCGTGTCCACCC 61.682 66.667 0.00 0.00 39.77 4.61
3704 4372 3.636313 TTCAACTCCGGCGGTAGCG 62.636 63.158 27.32 10.57 46.35 4.26
3743 4411 4.586421 ACGGCATCTTCTCTTCTCATCATA 59.414 41.667 0.00 0.00 0.00 2.15
3780 4448 0.947244 GACGGCCATATGCAAGGAAG 59.053 55.000 2.24 2.99 43.89 3.46
3830 4498 5.051441 CGATTACGTACGTAGAGAAGTAGCA 60.051 44.000 25.56 9.56 34.56 3.49
4027 4719 5.483811 GAAGTGTTAGAAAGGAGAGAAGGG 58.516 45.833 0.00 0.00 0.00 3.95
4032 4724 5.785423 TGTTAGAAAGGAGAGAAGGGATTGA 59.215 40.000 0.00 0.00 0.00 2.57
4040 4736 5.913534 AGGAGAGAAGGGATTGATGGAATAA 59.086 40.000 0.00 0.00 0.00 1.40
4104 4800 6.935208 GGAGTACAAAGACCAACTTGAAGTAT 59.065 38.462 0.00 0.00 38.98 2.12
4112 4808 8.974060 AAGACCAACTTGAAGTATAAGACAAA 57.026 30.769 0.00 0.00 37.45 2.83
4122 4818 4.833390 AGTATAAGACAAAGCAGGACCAC 58.167 43.478 0.00 0.00 0.00 4.16
4213 4914 1.821753 CAGACGGTGAGACTGGAGAAT 59.178 52.381 0.00 0.00 38.63 2.40
4217 4918 5.299531 CAGACGGTGAGACTGGAGAATAATA 59.700 44.000 0.00 0.00 38.63 0.98
4229 4930 4.141711 TGGAGAATAATACGAAGGCAAGCT 60.142 41.667 0.00 0.00 0.00 3.74
4233 4934 2.472695 AATACGAAGGCAAGCTGACA 57.527 45.000 0.00 0.00 0.00 3.58
4237 4938 1.294659 CGAAGGCAAGCTGACAGACC 61.295 60.000 6.65 1.38 0.00 3.85
4238 4939 0.957888 GAAGGCAAGCTGACAGACCC 60.958 60.000 6.65 0.00 0.00 4.46
4239 4940 2.360475 GGCAAGCTGACAGACCCC 60.360 66.667 6.65 0.00 0.00 4.95
4394 5098 1.210478 AGGTAGCCATGCGAAGAATGT 59.790 47.619 0.00 0.00 0.00 2.71
4399 5103 1.358877 CCATGCGAAGAATGTCGTGA 58.641 50.000 0.00 0.00 43.06 4.35
4446 5150 1.575576 CGAGGAAGTCGTCGTGGAGT 61.576 60.000 13.71 0.00 45.68 3.85
4450 5154 2.453773 GAAGTCGTCGTGGAGTCGCA 62.454 60.000 0.00 0.00 0.00 5.10
4458 5162 4.617520 TGGAGTCGCAGGCGCAAA 62.618 61.111 10.83 0.00 36.95 3.68
4461 5165 3.016474 GAGTCGCAGGCGCAAAGAC 62.016 63.158 10.83 12.85 36.95 3.01
4485 5189 1.373748 GAGTTAGTCGTGGGCGCAA 60.374 57.895 10.83 0.00 38.14 4.85
4532 5236 4.462834 AGGAAGTAGATGATGTTGACGACA 59.537 41.667 0.00 0.00 43.71 4.35
4616 5320 3.365291 GACCGGGCATGCGTAGACA 62.365 63.158 12.44 0.00 0.00 3.41
4739 5444 1.185618 ACTGGGACTTGCACGAGCTA 61.186 55.000 6.36 0.00 42.74 3.32
4798 5503 4.695231 CTCGACGACGGTTGCGGT 62.695 66.667 7.55 0.00 40.21 5.68
4853 5559 0.738975 CGGAGTAGATGAAGCGGTCA 59.261 55.000 0.00 0.00 41.67 4.02
4886 5592 1.954146 GACGCTGGCGACAAACTGA 60.954 57.895 21.77 0.00 42.06 3.41
4904 5610 1.204704 TGATGCTGGACGAAGACGAAT 59.795 47.619 0.00 0.00 42.66 3.34
4944 5650 1.453762 GCGTCTATGAGGGTAGCGGT 61.454 60.000 0.00 0.00 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 9.030301 CACGAACAGTTTTTGAATTTTTAGGAT 57.970 29.630 0.00 0.00 0.00 3.24
20 21 8.244802 TCACGAACAGTTTTTGAATTTTTAGGA 58.755 29.630 0.00 0.00 0.00 2.94
21 22 8.318167 GTCACGAACAGTTTTTGAATTTTTAGG 58.682 33.333 0.00 0.00 0.00 2.69
23 24 8.973835 AGTCACGAACAGTTTTTGAATTTTTA 57.026 26.923 0.00 0.00 0.00 1.52
24 25 7.883229 AGTCACGAACAGTTTTTGAATTTTT 57.117 28.000 0.00 0.00 0.00 1.94
58 60 9.421806 TGAGCGAACATTTTTGAATCAATAAAT 57.578 25.926 3.19 6.63 0.00 1.40
63 65 6.922407 TGAATGAGCGAACATTTTTGAATCAA 59.078 30.769 8.44 0.00 40.03 2.57
65 67 6.932901 TGAATGAGCGAACATTTTTGAATC 57.067 33.333 8.44 0.00 40.03 2.52
80 83 5.106442 TGCATGATCATTGTTTGAATGAGC 58.894 37.500 5.16 2.43 41.83 4.26
83 86 7.532682 TGAATGCATGATCATTGTTTGAATG 57.467 32.000 5.16 0.00 38.03 2.67
91 94 7.634432 CGAACATTTTTGAATGCATGATCATTG 59.366 33.333 5.16 3.21 36.85 2.82
181 186 8.986477 AACATTTCTTTTAAATCTTGGATCGG 57.014 30.769 0.00 0.00 0.00 4.18
271 304 7.507672 TTTTCAAATTCGTGAACGCTTTTAA 57.492 28.000 0.00 0.00 37.24 1.52
274 307 6.035542 ACATTTTTCAAATTCGTGAACGCTTT 59.964 30.769 0.00 0.00 37.24 3.51
278 311 7.517987 CGTTAACATTTTTCAAATTCGTGAACG 59.482 33.333 6.39 0.00 37.24 3.95
284 317 9.712410 CTGAATCGTTAACATTTTTCAAATTCG 57.288 29.630 6.39 0.00 0.00 3.34
301 334 1.999735 CGTGCACATACCTGAATCGTT 59.000 47.619 18.64 0.00 0.00 3.85
308 341 5.351233 TTTTAAACTCGTGCACATACCTG 57.649 39.130 18.64 0.00 0.00 4.00
384 419 0.911053 TGCTGCATGACCCAGATACA 59.089 50.000 0.00 0.00 32.03 2.29
395 430 4.921515 GCCATGACTATATTTTGCTGCATG 59.078 41.667 1.84 0.00 33.55 4.06
410 445 5.698104 TCATAATCTTCAATGGCCATGACT 58.302 37.500 21.63 4.31 0.00 3.41
447 483 1.226030 AAAGGGCTCGTACGTTGCAC 61.226 55.000 26.82 25.09 0.00 4.57
449 485 0.110373 CAAAAGGGCTCGTACGTTGC 60.110 55.000 16.05 19.20 0.00 4.17
455 491 2.843401 TACAAGCAAAAGGGCTCGTA 57.157 45.000 0.00 0.00 45.07 3.43
460 496 6.704050 TGAATTAAACTTACAAGCAAAAGGGC 59.296 34.615 0.00 0.00 0.00 5.19
510 547 3.194755 AGTCCAAACCAACACCAAACTTC 59.805 43.478 0.00 0.00 0.00 3.01
515 554 5.941555 AATAAAGTCCAAACCAACACCAA 57.058 34.783 0.00 0.00 0.00 3.67
586 626 2.985139 GGACGACAACAGCACTAGTAAC 59.015 50.000 0.00 0.00 0.00 2.50
613 658 3.541711 CGCAAACTAAAAAGACTGACCG 58.458 45.455 0.00 0.00 0.00 4.79
614 659 3.297472 GCGCAAACTAAAAAGACTGACC 58.703 45.455 0.30 0.00 0.00 4.02
652 697 5.390461 GGTGTTTTTGTTGTTCAGCCTTTTC 60.390 40.000 0.00 0.00 0.00 2.29
794 839 2.037902 TGGTCATTTTCTCACTACGGCA 59.962 45.455 0.00 0.00 0.00 5.69
817 862 0.323302 TGTTGGCTATTGCTGGTCGA 59.677 50.000 0.00 0.00 39.59 4.20
863 911 0.035056 GGTCATTGGTCAGTGAGGGG 60.035 60.000 0.00 0.00 0.00 4.79
930 979 3.553096 CCATAAGTAGTAGGAAGCAGCGG 60.553 52.174 0.00 0.00 0.00 5.52
988 1041 0.665068 TGTGTCACGGCATGTACGAC 60.665 55.000 16.78 8.79 34.93 4.34
989 1042 0.032267 TTGTGTCACGGCATGTACGA 59.968 50.000 16.78 0.00 34.93 3.43
1024 1102 1.629013 CGCTGAGATTTCGTGCTACA 58.371 50.000 0.00 0.00 0.00 2.74
1094 1172 0.683504 ATCGAGGTGGCCGAGTAGTT 60.684 55.000 0.00 0.00 39.55 2.24
1125 1203 1.353103 GATGGCCGCGATGTCTTTG 59.647 57.895 8.23 0.00 0.00 2.77
1126 1204 1.819632 GGATGGCCGCGATGTCTTT 60.820 57.895 8.23 0.00 0.00 2.52
1152 1230 1.997311 CATCCCTCCTGGCAGGTCA 60.997 63.158 31.60 14.02 36.53 4.02
1444 1525 3.260483 CTGCAGATGCGTCGGAGC 61.260 66.667 8.42 11.53 45.83 4.70
1757 1838 1.432514 GCTGTCGCAGAGAACATTCA 58.567 50.000 10.46 0.00 36.95 2.57
1783 1864 1.220749 GCGTCCCATGACTTGGCTA 59.779 57.895 0.00 0.00 44.97 3.93
1784 1865 1.264749 TAGCGTCCCATGACTTGGCT 61.265 55.000 0.00 0.00 44.97 4.75
1793 1886 2.364579 TTCCCCGTAGCGTCCCAT 60.365 61.111 0.00 0.00 0.00 4.00
1795 1888 3.846430 CCTTCCCCGTAGCGTCCC 61.846 72.222 0.00 0.00 0.00 4.46
1798 1891 4.078516 GTGCCTTCCCCGTAGCGT 62.079 66.667 0.00 0.00 0.00 5.07
1813 1906 0.746563 AAACCCTCGTGTGTGGTGTG 60.747 55.000 0.00 0.00 31.32 3.82
1815 1908 1.223187 GTAAACCCTCGTGTGTGGTG 58.777 55.000 0.00 0.00 31.32 4.17
1818 1911 0.856641 CGTGTAAACCCTCGTGTGTG 59.143 55.000 0.00 0.00 0.00 3.82
1819 1912 0.249573 CCGTGTAAACCCTCGTGTGT 60.250 55.000 0.00 0.00 0.00 3.72
1820 1913 1.562575 GCCGTGTAAACCCTCGTGTG 61.563 60.000 0.00 0.00 0.00 3.82
1887 1980 4.794334 ACCAGTCTCACCGAGTCTTATAT 58.206 43.478 0.00 0.00 0.00 0.86
1905 1998 0.764890 TTCCTTCCCACTGTGACCAG 59.235 55.000 9.86 1.48 44.68 4.00
1906 1999 0.472471 GTTCCTTCCCACTGTGACCA 59.528 55.000 9.86 0.00 0.00 4.02
1907 2000 0.765510 AGTTCCTTCCCACTGTGACC 59.234 55.000 9.86 0.00 0.00 4.02
1908 2001 2.640316 AAGTTCCTTCCCACTGTGAC 57.360 50.000 9.86 0.00 0.00 3.67
1909 2002 2.637872 CCTAAGTTCCTTCCCACTGTGA 59.362 50.000 9.86 0.00 0.00 3.58
1910 2003 2.637872 TCCTAAGTTCCTTCCCACTGTG 59.362 50.000 0.00 0.00 0.00 3.66
1911 2004 2.907042 CTCCTAAGTTCCTTCCCACTGT 59.093 50.000 0.00 0.00 0.00 3.55
1912 2005 2.907042 ACTCCTAAGTTCCTTCCCACTG 59.093 50.000 0.00 0.00 28.74 3.66
1913 2006 3.277416 ACTCCTAAGTTCCTTCCCACT 57.723 47.619 0.00 0.00 28.74 4.00
1914 2007 4.285260 TGTTACTCCTAAGTTCCTTCCCAC 59.715 45.833 0.00 0.00 36.92 4.61
1915 2008 4.495565 TGTTACTCCTAAGTTCCTTCCCA 58.504 43.478 0.00 0.00 36.92 4.37
1916 2009 5.189145 TGATGTTACTCCTAAGTTCCTTCCC 59.811 44.000 0.00 0.00 36.92 3.97
1917 2010 6.107343 GTGATGTTACTCCTAAGTTCCTTCC 58.893 44.000 0.00 0.00 36.92 3.46
1918 2011 6.590677 GTGTGATGTTACTCCTAAGTTCCTTC 59.409 42.308 0.00 0.00 36.92 3.46
1919 2012 6.042781 TGTGTGATGTTACTCCTAAGTTCCTT 59.957 38.462 0.00 0.00 36.92 3.36
1920 2013 5.542635 TGTGTGATGTTACTCCTAAGTTCCT 59.457 40.000 0.00 0.00 36.92 3.36
1921 2014 5.638234 GTGTGTGATGTTACTCCTAAGTTCC 59.362 44.000 0.00 0.00 36.92 3.62
1922 2015 6.456501 AGTGTGTGATGTTACTCCTAAGTTC 58.543 40.000 0.00 0.00 36.92 3.01
1923 2016 6.420913 AGTGTGTGATGTTACTCCTAAGTT 57.579 37.500 0.00 0.00 36.92 2.66
1924 2017 6.026947 GAGTGTGTGATGTTACTCCTAAGT 57.973 41.667 0.00 0.00 39.66 2.24
1930 2023 6.163476 TGTATTGGAGTGTGTGATGTTACTC 58.837 40.000 0.00 0.00 38.98 2.59
1931 2024 6.109156 TGTATTGGAGTGTGTGATGTTACT 57.891 37.500 0.00 0.00 0.00 2.24
1932 2025 6.426937 AGTTGTATTGGAGTGTGTGATGTTAC 59.573 38.462 0.00 0.00 0.00 2.50
1933 2026 6.530120 AGTTGTATTGGAGTGTGTGATGTTA 58.470 36.000 0.00 0.00 0.00 2.41
1934 2027 5.376625 AGTTGTATTGGAGTGTGTGATGTT 58.623 37.500 0.00 0.00 0.00 2.71
1935 2028 4.973168 AGTTGTATTGGAGTGTGTGATGT 58.027 39.130 0.00 0.00 0.00 3.06
1936 2029 5.947228 AAGTTGTATTGGAGTGTGTGATG 57.053 39.130 0.00 0.00 0.00 3.07
1937 2030 5.278463 GCAAAGTTGTATTGGAGTGTGTGAT 60.278 40.000 0.00 0.00 0.00 3.06
1938 2031 4.036262 GCAAAGTTGTATTGGAGTGTGTGA 59.964 41.667 0.00 0.00 0.00 3.58
1939 2032 4.036734 AGCAAAGTTGTATTGGAGTGTGTG 59.963 41.667 0.00 0.00 0.00 3.82
1940 2033 4.207165 AGCAAAGTTGTATTGGAGTGTGT 58.793 39.130 0.00 0.00 0.00 3.72
1941 2034 4.836125 AGCAAAGTTGTATTGGAGTGTG 57.164 40.909 0.00 0.00 0.00 3.82
1942 2035 6.490040 ACATAAGCAAAGTTGTATTGGAGTGT 59.510 34.615 0.00 0.00 0.00 3.55
1943 2036 6.803320 CACATAAGCAAAGTTGTATTGGAGTG 59.197 38.462 0.00 0.00 0.00 3.51
1944 2037 6.570378 GCACATAAGCAAAGTTGTATTGGAGT 60.570 38.462 0.00 0.00 0.00 3.85
1945 2038 5.801947 GCACATAAGCAAAGTTGTATTGGAG 59.198 40.000 0.00 0.00 0.00 3.86
1946 2039 5.336372 GGCACATAAGCAAAGTTGTATTGGA 60.336 40.000 0.00 0.00 35.83 3.53
1947 2040 4.864247 GGCACATAAGCAAAGTTGTATTGG 59.136 41.667 0.00 0.00 35.83 3.16
1948 2041 5.345741 GTGGCACATAAGCAAAGTTGTATTG 59.654 40.000 13.86 0.00 44.52 1.90
1949 2042 5.469479 GTGGCACATAAGCAAAGTTGTATT 58.531 37.500 13.86 0.00 44.52 1.89
1950 2043 4.379394 CGTGGCACATAAGCAAAGTTGTAT 60.379 41.667 19.09 0.00 44.52 2.29
1951 2044 3.058570 CGTGGCACATAAGCAAAGTTGTA 60.059 43.478 19.09 0.00 44.52 2.41
1952 2045 2.287547 CGTGGCACATAAGCAAAGTTGT 60.288 45.455 19.09 0.00 44.52 3.32
1953 2046 2.287547 ACGTGGCACATAAGCAAAGTTG 60.288 45.455 19.09 0.00 44.52 3.16
1954 2047 1.953686 ACGTGGCACATAAGCAAAGTT 59.046 42.857 19.09 0.00 44.52 2.66
1955 2048 1.604604 ACGTGGCACATAAGCAAAGT 58.395 45.000 19.09 0.55 44.52 2.66
1956 2049 4.355543 AATACGTGGCACATAAGCAAAG 57.644 40.909 19.09 0.00 44.52 2.77
1957 2050 4.775058 AAATACGTGGCACATAAGCAAA 57.225 36.364 19.09 0.00 44.52 3.68
1958 2051 5.881777 TTAAATACGTGGCACATAAGCAA 57.118 34.783 19.09 1.60 44.52 3.91
1959 2052 5.586643 TCATTAAATACGTGGCACATAAGCA 59.413 36.000 19.09 0.00 44.52 3.91
1960 2053 6.055231 TCATTAAATACGTGGCACATAAGC 57.945 37.500 19.09 0.00 44.52 3.09
1961 2054 9.811655 CTTATCATTAAATACGTGGCACATAAG 57.188 33.333 19.09 13.86 44.52 1.73
1962 2055 9.549078 TCTTATCATTAAATACGTGGCACATAA 57.451 29.630 19.09 8.65 44.52 1.90
1963 2056 9.203421 CTCTTATCATTAAATACGTGGCACATA 57.797 33.333 19.09 7.26 44.52 2.29
1964 2057 7.931407 TCTCTTATCATTAAATACGTGGCACAT 59.069 33.333 19.09 4.55 44.52 3.21
1965 2058 7.269316 TCTCTTATCATTAAATACGTGGCACA 58.731 34.615 19.09 0.00 0.00 4.57
1966 2059 7.095607 CCTCTCTTATCATTAAATACGTGGCAC 60.096 40.741 7.79 7.79 0.00 5.01
1967 2060 6.929049 CCTCTCTTATCATTAAATACGTGGCA 59.071 38.462 0.00 0.00 0.00 4.92
1968 2061 6.929606 ACCTCTCTTATCATTAAATACGTGGC 59.070 38.462 0.00 0.00 0.00 5.01
1969 2062 7.926555 ACACCTCTCTTATCATTAAATACGTGG 59.073 37.037 0.00 0.00 0.00 4.94
1970 2063 8.873215 ACACCTCTCTTATCATTAAATACGTG 57.127 34.615 0.00 0.00 0.00 4.49
1971 2064 9.886132 AAACACCTCTCTTATCATTAAATACGT 57.114 29.630 0.00 0.00 0.00 3.57
1975 2068 8.960591 CCACAAACACCTCTCTTATCATTAAAT 58.039 33.333 0.00 0.00 0.00 1.40
1976 2069 7.942341 ACCACAAACACCTCTCTTATCATTAAA 59.058 33.333 0.00 0.00 0.00 1.52
1977 2070 7.458397 ACCACAAACACCTCTCTTATCATTAA 58.542 34.615 0.00 0.00 0.00 1.40
1978 2071 7.016153 ACCACAAACACCTCTCTTATCATTA 57.984 36.000 0.00 0.00 0.00 1.90
1979 2072 5.880901 ACCACAAACACCTCTCTTATCATT 58.119 37.500 0.00 0.00 0.00 2.57
1980 2073 5.505181 ACCACAAACACCTCTCTTATCAT 57.495 39.130 0.00 0.00 0.00 2.45
1981 2074 4.974645 ACCACAAACACCTCTCTTATCA 57.025 40.909 0.00 0.00 0.00 2.15
1982 2075 6.465084 AGTTACCACAAACACCTCTCTTATC 58.535 40.000 0.00 0.00 0.00 1.75
1983 2076 6.435292 AGTTACCACAAACACCTCTCTTAT 57.565 37.500 0.00 0.00 0.00 1.73
1984 2077 5.881923 AGTTACCACAAACACCTCTCTTA 57.118 39.130 0.00 0.00 0.00 2.10
1985 2078 4.772886 AGTTACCACAAACACCTCTCTT 57.227 40.909 0.00 0.00 0.00 2.85
1986 2079 4.262506 GCTAGTTACCACAAACACCTCTCT 60.263 45.833 0.00 0.00 0.00 3.10
1987 2080 3.995048 GCTAGTTACCACAAACACCTCTC 59.005 47.826 0.00 0.00 0.00 3.20
1988 2081 3.646637 AGCTAGTTACCACAAACACCTCT 59.353 43.478 0.00 0.00 0.00 3.69
1989 2082 4.004196 AGCTAGTTACCACAAACACCTC 57.996 45.455 0.00 0.00 0.00 3.85
1990 2083 5.071384 ACTTAGCTAGTTACCACAAACACCT 59.929 40.000 0.00 0.00 31.29 4.00
1991 2084 5.303165 ACTTAGCTAGTTACCACAAACACC 58.697 41.667 0.00 0.00 31.29 4.16
1992 2085 6.856135 AACTTAGCTAGTTACCACAAACAC 57.144 37.500 6.75 0.00 45.22 3.32
2004 2097 7.976734 GTGTGATGTTCTGATAACTTAGCTAGT 59.023 37.037 0.00 0.00 39.32 2.57
2005 2098 7.976175 TGTGTGATGTTCTGATAACTTAGCTAG 59.024 37.037 0.00 0.00 0.00 3.42
2006 2099 7.759886 GTGTGTGATGTTCTGATAACTTAGCTA 59.240 37.037 0.00 0.00 0.00 3.32
2007 2100 6.591834 GTGTGTGATGTTCTGATAACTTAGCT 59.408 38.462 0.00 0.00 0.00 3.32
2008 2101 6.591834 AGTGTGTGATGTTCTGATAACTTAGC 59.408 38.462 0.00 0.00 0.00 3.09
2009 2102 8.539770 AAGTGTGTGATGTTCTGATAACTTAG 57.460 34.615 0.00 0.00 0.00 2.18
2010 2103 8.147704 TGAAGTGTGTGATGTTCTGATAACTTA 58.852 33.333 0.00 0.00 0.00 2.24
2011 2104 6.992123 TGAAGTGTGTGATGTTCTGATAACTT 59.008 34.615 0.00 0.00 0.00 2.66
2012 2105 6.524734 TGAAGTGTGTGATGTTCTGATAACT 58.475 36.000 0.00 0.00 0.00 2.24
2013 2106 6.785488 TGAAGTGTGTGATGTTCTGATAAC 57.215 37.500 0.00 0.00 0.00 1.89
2014 2107 7.800155 TTTGAAGTGTGTGATGTTCTGATAA 57.200 32.000 0.00 0.00 0.00 1.75
2015 2108 7.800155 TTTTGAAGTGTGTGATGTTCTGATA 57.200 32.000 0.00 0.00 0.00 2.15
2016 2109 6.698008 TTTTGAAGTGTGTGATGTTCTGAT 57.302 33.333 0.00 0.00 0.00 2.90
2017 2110 6.507958 TTTTTGAAGTGTGTGATGTTCTGA 57.492 33.333 0.00 0.00 0.00 3.27
2069 2162 6.585416 ACATCTATGTAGTGTCATGCAATGA 58.415 36.000 0.00 0.00 45.34 2.57
2070 2163 6.856135 ACATCTATGTAGTGTCATGCAATG 57.144 37.500 0.00 0.00 42.25 2.82
2071 2164 7.772292 AGAAACATCTATGTAGTGTCATGCAAT 59.228 33.333 0.00 0.00 40.80 3.56
2072 2165 7.105588 AGAAACATCTATGTAGTGTCATGCAA 58.894 34.615 0.00 0.00 40.80 4.08
2073 2166 6.643388 AGAAACATCTATGTAGTGTCATGCA 58.357 36.000 0.00 0.00 40.80 3.96
2074 2167 8.824159 ATAGAAACATCTATGTAGTGTCATGC 57.176 34.615 0.00 0.00 40.80 4.06
2077 2170 9.803315 GTGAATAGAAACATCTATGTAGTGTCA 57.197 33.333 0.00 0.00 40.80 3.58
2084 2177 8.378565 CCCCATAGTGAATAGAAACATCTATGT 58.621 37.037 0.00 0.00 44.20 2.29
2085 2178 7.826252 CCCCCATAGTGAATAGAAACATCTATG 59.174 40.741 0.00 0.00 33.59 2.23
2086 2179 7.517604 ACCCCCATAGTGAATAGAAACATCTAT 59.482 37.037 0.00 0.00 34.65 1.98
2087 2180 6.849697 ACCCCCATAGTGAATAGAAACATCTA 59.150 38.462 0.00 0.00 0.00 1.98
2088 2181 5.672194 ACCCCCATAGTGAATAGAAACATCT 59.328 40.000 0.00 0.00 0.00 2.90
2089 2182 5.941788 ACCCCCATAGTGAATAGAAACATC 58.058 41.667 0.00 0.00 0.00 3.06
2090 2183 5.994416 ACCCCCATAGTGAATAGAAACAT 57.006 39.130 0.00 0.00 0.00 2.71
2091 2184 5.968167 ACTACCCCCATAGTGAATAGAAACA 59.032 40.000 0.00 0.00 34.02 2.83
2092 2185 6.496144 ACTACCCCCATAGTGAATAGAAAC 57.504 41.667 0.00 0.00 34.02 2.78
2093 2186 7.624478 TGTTACTACCCCCATAGTGAATAGAAA 59.376 37.037 0.00 0.00 36.09 2.52
2094 2187 7.134162 TGTTACTACCCCCATAGTGAATAGAA 58.866 38.462 0.00 0.00 36.09 2.10
2095 2188 6.685541 TGTTACTACCCCCATAGTGAATAGA 58.314 40.000 0.00 0.00 36.09 1.98
2096 2189 6.989155 TGTTACTACCCCCATAGTGAATAG 57.011 41.667 0.00 0.00 36.09 1.73
2097 2190 8.236643 ACTATGTTACTACCCCCATAGTGAATA 58.763 37.037 9.63 0.00 44.96 1.75
2098 2191 7.080353 ACTATGTTACTACCCCCATAGTGAAT 58.920 38.462 9.63 0.00 44.96 2.57
2099 2192 6.446451 ACTATGTTACTACCCCCATAGTGAA 58.554 40.000 9.63 0.00 44.96 3.18
2100 2193 6.034442 ACTATGTTACTACCCCCATAGTGA 57.966 41.667 9.63 0.00 44.96 3.41
2101 2194 6.075984 AGACTATGTTACTACCCCCATAGTG 58.924 44.000 14.01 0.00 46.02 2.74
2103 2196 6.890814 CCTAGACTATGTTACTACCCCCATAG 59.109 46.154 0.00 0.00 41.50 2.23
2104 2197 6.240674 CCCTAGACTATGTTACTACCCCCATA 60.241 46.154 0.00 0.00 0.00 2.74
2105 2198 5.460720 CCCTAGACTATGTTACTACCCCCAT 60.461 48.000 0.00 0.00 0.00 4.00
2106 2199 4.140853 CCCTAGACTATGTTACTACCCCCA 60.141 50.000 0.00 0.00 0.00 4.96
2107 2200 4.106987 TCCCTAGACTATGTTACTACCCCC 59.893 50.000 0.00 0.00 0.00 5.40
2108 2201 5.323581 CTCCCTAGACTATGTTACTACCCC 58.676 50.000 0.00 0.00 0.00 4.95
2109 2202 5.163001 ACCTCCCTAGACTATGTTACTACCC 60.163 48.000 0.00 0.00 0.00 3.69
2110 2203 5.769162 CACCTCCCTAGACTATGTTACTACC 59.231 48.000 0.00 0.00 0.00 3.18
2111 2204 6.262720 CACACCTCCCTAGACTATGTTACTAC 59.737 46.154 0.00 0.00 0.00 2.73
2112 2205 6.069206 ACACACCTCCCTAGACTATGTTACTA 60.069 42.308 0.00 0.00 0.00 1.82
2113 2206 5.202004 CACACCTCCCTAGACTATGTTACT 58.798 45.833 0.00 0.00 0.00 2.24
2114 2207 4.954826 ACACACCTCCCTAGACTATGTTAC 59.045 45.833 0.00 0.00 0.00 2.50
2115 2208 5.202746 ACACACCTCCCTAGACTATGTTA 57.797 43.478 0.00 0.00 0.00 2.41
2116 2209 4.062490 ACACACCTCCCTAGACTATGTT 57.938 45.455 0.00 0.00 0.00 2.71
2117 2210 3.759815 ACACACCTCCCTAGACTATGT 57.240 47.619 0.00 0.00 0.00 2.29
2118 2211 5.202004 ACTTACACACCTCCCTAGACTATG 58.798 45.833 0.00 0.00 0.00 2.23
2119 2212 5.469210 ACTTACACACCTCCCTAGACTAT 57.531 43.478 0.00 0.00 0.00 2.12
2120 2213 4.942363 ACTTACACACCTCCCTAGACTA 57.058 45.455 0.00 0.00 0.00 2.59
2121 2214 3.829728 ACTTACACACCTCCCTAGACT 57.170 47.619 0.00 0.00 0.00 3.24
2122 2215 3.616802 GCAACTTACACACCTCCCTAGAC 60.617 52.174 0.00 0.00 0.00 2.59
2123 2216 2.565834 GCAACTTACACACCTCCCTAGA 59.434 50.000 0.00 0.00 0.00 2.43
2124 2217 2.567615 AGCAACTTACACACCTCCCTAG 59.432 50.000 0.00 0.00 0.00 3.02
2125 2218 2.616524 AGCAACTTACACACCTCCCTA 58.383 47.619 0.00 0.00 0.00 3.53
2126 2219 1.435256 AGCAACTTACACACCTCCCT 58.565 50.000 0.00 0.00 0.00 4.20
2127 2220 2.935676 GCTAGCAACTTACACACCTCCC 60.936 54.545 10.63 0.00 0.00 4.30
2128 2221 2.028020 AGCTAGCAACTTACACACCTCC 60.028 50.000 18.83 0.00 0.00 4.30
2129 2222 3.320673 AGCTAGCAACTTACACACCTC 57.679 47.619 18.83 0.00 0.00 3.85
2130 2223 3.771577 AAGCTAGCAACTTACACACCT 57.228 42.857 18.83 0.00 0.00 4.00
2131 2224 4.935808 ACATAAGCTAGCAACTTACACACC 59.064 41.667 18.83 0.00 32.67 4.16
2132 2225 6.369065 AGAACATAAGCTAGCAACTTACACAC 59.631 38.462 18.83 0.00 32.67 3.82
2133 2226 6.464222 AGAACATAAGCTAGCAACTTACACA 58.536 36.000 18.83 0.00 32.67 3.72
2134 2227 6.969828 AGAACATAAGCTAGCAACTTACAC 57.030 37.500 18.83 2.05 32.67 2.90
2135 2228 6.128282 GCAAGAACATAAGCTAGCAACTTACA 60.128 38.462 18.83 0.00 32.67 2.41
2136 2229 6.251549 GCAAGAACATAAGCTAGCAACTTAC 58.748 40.000 18.83 2.71 32.67 2.34
2137 2230 5.354234 GGCAAGAACATAAGCTAGCAACTTA 59.646 40.000 18.83 7.44 34.29 2.24
2138 2231 4.156739 GGCAAGAACATAAGCTAGCAACTT 59.843 41.667 18.83 5.14 0.00 2.66
2139 2232 3.691609 GGCAAGAACATAAGCTAGCAACT 59.308 43.478 18.83 3.21 0.00 3.16
2140 2233 3.181496 GGGCAAGAACATAAGCTAGCAAC 60.181 47.826 18.83 0.00 0.00 4.17
2141 2234 3.016736 GGGCAAGAACATAAGCTAGCAA 58.983 45.455 18.83 4.69 0.00 3.91
2142 2235 2.026356 TGGGCAAGAACATAAGCTAGCA 60.026 45.455 18.83 0.00 0.00 3.49
2143 2236 2.643551 TGGGCAAGAACATAAGCTAGC 58.356 47.619 6.62 6.62 0.00 3.42
2144 2237 8.507249 GTTATAATGGGCAAGAACATAAGCTAG 58.493 37.037 0.00 0.00 0.00 3.42
2145 2238 7.447238 GGTTATAATGGGCAAGAACATAAGCTA 59.553 37.037 0.00 0.00 0.00 3.32
2146 2239 6.265422 GGTTATAATGGGCAAGAACATAAGCT 59.735 38.462 0.00 0.00 0.00 3.74
2147 2240 6.040391 TGGTTATAATGGGCAAGAACATAAGC 59.960 38.462 0.00 0.00 0.00 3.09
2148 2241 7.581213 TGGTTATAATGGGCAAGAACATAAG 57.419 36.000 0.00 0.00 0.00 1.73
2149 2242 6.040391 GCTGGTTATAATGGGCAAGAACATAA 59.960 38.462 0.00 0.00 0.00 1.90
2150 2243 5.534654 GCTGGTTATAATGGGCAAGAACATA 59.465 40.000 0.00 0.00 0.00 2.29
2151 2244 4.342092 GCTGGTTATAATGGGCAAGAACAT 59.658 41.667 0.00 0.00 0.00 2.71
2152 2245 3.699038 GCTGGTTATAATGGGCAAGAACA 59.301 43.478 0.00 0.00 0.00 3.18
2153 2246 3.068165 GGCTGGTTATAATGGGCAAGAAC 59.932 47.826 0.00 0.00 0.00 3.01
2154 2247 3.052944 AGGCTGGTTATAATGGGCAAGAA 60.053 43.478 0.00 0.00 0.00 2.52
2155 2248 2.513738 AGGCTGGTTATAATGGGCAAGA 59.486 45.455 0.00 0.00 0.00 3.02
2156 2249 2.624838 CAGGCTGGTTATAATGGGCAAG 59.375 50.000 6.61 0.00 0.00 4.01
2157 2250 2.243478 TCAGGCTGGTTATAATGGGCAA 59.757 45.455 15.73 0.00 0.00 4.52
2158 2251 1.849692 TCAGGCTGGTTATAATGGGCA 59.150 47.619 15.73 0.00 0.00 5.36
2159 2252 2.508526 CTCAGGCTGGTTATAATGGGC 58.491 52.381 15.73 0.00 0.00 5.36
2160 2253 2.711009 TCCTCAGGCTGGTTATAATGGG 59.289 50.000 15.73 3.83 0.00 4.00
2161 2254 4.566488 GGATCCTCAGGCTGGTTATAATGG 60.566 50.000 15.73 4.81 0.00 3.16
2162 2255 4.042062 TGGATCCTCAGGCTGGTTATAATG 59.958 45.833 15.73 0.00 0.00 1.90
2163 2256 4.242811 TGGATCCTCAGGCTGGTTATAAT 58.757 43.478 15.73 0.27 0.00 1.28
2164 2257 3.664320 TGGATCCTCAGGCTGGTTATAA 58.336 45.455 15.73 0.00 0.00 0.98
2165 2258 3.344535 TGGATCCTCAGGCTGGTTATA 57.655 47.619 15.73 0.00 0.00 0.98
2166 2259 2.196742 TGGATCCTCAGGCTGGTTAT 57.803 50.000 15.73 5.39 0.00 1.89
2167 2260 1.770658 CATGGATCCTCAGGCTGGTTA 59.229 52.381 15.73 0.02 0.00 2.85
2168 2261 0.549950 CATGGATCCTCAGGCTGGTT 59.450 55.000 15.73 0.00 0.00 3.67
2169 2262 0.326904 TCATGGATCCTCAGGCTGGT 60.327 55.000 15.73 0.00 0.00 4.00
2170 2263 0.108207 GTCATGGATCCTCAGGCTGG 59.892 60.000 15.73 5.31 0.00 4.85
2171 2264 1.129917 AGTCATGGATCCTCAGGCTG 58.870 55.000 14.23 8.58 0.00 4.85
2172 2265 1.890552 AAGTCATGGATCCTCAGGCT 58.109 50.000 14.23 6.63 0.00 4.58
2173 2266 2.725221 AAAGTCATGGATCCTCAGGC 57.275 50.000 14.23 4.20 0.00 4.85
2174 2267 7.683578 TGATTATAAAGTCATGGATCCTCAGG 58.316 38.462 14.23 0.00 0.00 3.86
2175 2268 8.373981 ACTGATTATAAAGTCATGGATCCTCAG 58.626 37.037 14.23 14.14 0.00 3.35
2176 2269 8.267620 ACTGATTATAAAGTCATGGATCCTCA 57.732 34.615 14.23 2.37 0.00 3.86
2177 2270 7.543868 CGACTGATTATAAAGTCATGGATCCTC 59.456 40.741 14.23 1.17 42.45 3.71
2178 2271 7.015682 ACGACTGATTATAAAGTCATGGATCCT 59.984 37.037 14.23 0.00 42.45 3.24
2179 2272 7.116948 CACGACTGATTATAAAGTCATGGATCC 59.883 40.741 4.20 4.20 42.45 3.36
2190 2283 4.496360 TCGCCAACACGACTGATTATAAA 58.504 39.130 0.00 0.00 37.09 1.40
2198 2291 1.148310 AAGAATCGCCAACACGACTG 58.852 50.000 0.00 0.00 46.28 3.51
2232 2505 2.218603 GCTCTCGTTGGTTCCTTCAAA 58.781 47.619 0.00 0.00 0.00 2.69
2235 2508 0.673956 GGGCTCTCGTTGGTTCCTTC 60.674 60.000 0.00 0.00 0.00 3.46
2236 2509 1.128188 AGGGCTCTCGTTGGTTCCTT 61.128 55.000 0.00 0.00 0.00 3.36
2255 2528 6.318648 CCTTACTTGCACTATATGAAAAGGCA 59.681 38.462 0.00 0.00 31.14 4.75
2272 2545 5.183140 CACCCCTTGTACAATTCCTTACTTG 59.817 44.000 9.13 0.00 0.00 3.16
2275 2548 4.913784 TCACCCCTTGTACAATTCCTTAC 58.086 43.478 9.13 0.00 0.00 2.34
2294 2567 5.447413 GCGAGCTCCCTACTAAAATTTTCAC 60.447 44.000 6.72 0.00 0.00 3.18
2300 2573 1.068741 CGGCGAGCTCCCTACTAAAAT 59.931 52.381 8.47 0.00 0.00 1.82
2305 2578 1.681327 TTTCGGCGAGCTCCCTACT 60.681 57.895 10.46 0.00 0.00 2.57
2307 2580 2.718073 GGTTTCGGCGAGCTCCCTA 61.718 63.158 10.46 0.00 0.00 3.53
2344 2618 1.856688 CACAAATTCGACCGACGCA 59.143 52.632 0.00 0.00 42.26 5.24
2358 2632 2.741985 CGCATCGGAGGTGCACAA 60.742 61.111 20.43 0.00 42.62 3.33
2390 2665 0.899717 TTCTCACCAATGCTTGCCCC 60.900 55.000 0.00 0.00 0.00 5.80
2480 2755 2.363925 AGACTCCCCACTACCGGC 60.364 66.667 0.00 0.00 0.00 6.13
2498 2780 3.077359 CCCACCTGAATCTGTCAACTTC 58.923 50.000 0.00 0.00 35.22 3.01
2507 2789 2.311854 CCCAGCCCCACCTGAATCT 61.312 63.158 0.00 0.00 34.77 2.40
2521 2803 1.918253 CTGATGACCCTTCCCCCAG 59.082 63.158 0.00 0.00 0.00 4.45
2542 2824 1.593006 CTAACCACGACATGATTCGGC 59.407 52.381 10.11 0.00 43.58 5.54
2556 2838 2.883888 GCCCAAGCATTTCCTCTAACCA 60.884 50.000 0.00 0.00 39.53 3.67
2573 2855 3.266686 AATGTGTAGCCGCTGCCCA 62.267 57.895 2.16 0.00 38.69 5.36
2579 2861 2.406616 CCCACCAATGTGTAGCCGC 61.407 63.158 0.00 0.00 41.09 6.53
2637 2919 2.838225 CTACCCGCCCTCCGATGT 60.838 66.667 0.00 0.00 40.02 3.06
2653 2935 4.581309 TCTTCTTCCTCATTCAATGCCT 57.419 40.909 0.00 0.00 0.00 4.75
2657 2939 5.770162 ACGGTTTTCTTCTTCCTCATTCAAT 59.230 36.000 0.00 0.00 0.00 2.57
2712 3029 5.828299 TTTTTATTGGGTCGGCTATTGAG 57.172 39.130 0.00 0.00 0.00 3.02
2759 3077 7.674240 GCACAAACTAGCTAATTAGGTCTTTCG 60.674 40.741 19.99 14.03 35.39 3.46
2998 3395 5.584649 CGGAAGTTGATAAGTAGCCATTTGA 59.415 40.000 0.00 0.00 0.00 2.69
3099 3581 0.673644 GCTGCTCTCCCAAGCGTAAA 60.674 55.000 0.00 0.00 45.54 2.01
3105 3587 0.250640 ACTGTTGCTGCTCTCCCAAG 60.251 55.000 0.00 0.00 0.00 3.61
3126 3608 5.219343 TGACTAATCAGGCAGTGGATATG 57.781 43.478 0.00 0.00 33.67 1.78
3167 3651 9.193806 ACATAATTTGCAAATGTCCTATCTTCT 57.806 29.630 24.74 7.53 0.00 2.85
3173 3657 7.089538 CACACACATAATTTGCAAATGTCCTA 58.910 34.615 24.74 13.70 31.60 2.94
3174 3658 5.927689 CACACACATAATTTGCAAATGTCCT 59.072 36.000 24.74 11.92 31.60 3.85
3188 3672 9.926751 CAAAAATATTTGCAAACACACACATAA 57.073 25.926 15.41 0.00 39.50 1.90
3208 3853 8.418662 AGATTGTCATGTATGCTATGCAAAAAT 58.581 29.630 0.00 0.00 43.62 1.82
3209 3854 7.703197 CAGATTGTCATGTATGCTATGCAAAAA 59.297 33.333 0.00 0.00 43.62 1.94
3210 3855 7.067251 TCAGATTGTCATGTATGCTATGCAAAA 59.933 33.333 0.00 0.00 43.62 2.44
3249 3899 2.617250 TCAATCATGCACGCAGTTTC 57.383 45.000 0.00 0.00 41.61 2.78
3266 3916 2.565834 GGTAGTAGCTCCTGTTGGTTCA 59.434 50.000 0.00 0.00 34.23 3.18
3267 3917 2.416972 CGGTAGTAGCTCCTGTTGGTTC 60.417 54.545 0.00 0.00 34.23 3.62
3490 4158 1.375396 CTCGGTCGGTGCCATGAAA 60.375 57.895 0.00 0.00 0.00 2.69
3638 4306 0.251916 TAATCCGTGTCCCTTGCTGG 59.748 55.000 0.00 0.00 0.00 4.85
3676 4344 1.068474 CGGAGTTGAACATGACGTCC 58.932 55.000 14.12 0.00 0.00 4.79
3709 4377 3.993614 GATGCCGTCCATGCCCACA 62.994 63.158 0.00 0.00 33.29 4.17
3712 4380 2.124151 AAGATGCCGTCCATGCCC 60.124 61.111 0.00 0.00 33.29 5.36
3743 4411 3.886505 CCGTCCTTCTAGCTATCACTTCT 59.113 47.826 0.00 0.00 0.00 2.85
3780 4448 7.607250 ACTATGAGAACGAATAATCCAGATCC 58.393 38.462 0.00 0.00 0.00 3.36
3830 4498 4.517285 ACGAGCAACCAGACATAAATCAT 58.483 39.130 0.00 0.00 0.00 2.45
3905 4577 5.952947 AGTCTAACAGAGGCTACAACTATGT 59.047 40.000 0.00 0.00 38.80 2.29
3977 4657 8.663025 CGCATATAAGATCAACATTTCTAGCAT 58.337 33.333 0.00 0.00 0.00 3.79
3988 4671 6.604735 AACACTTCCGCATATAAGATCAAC 57.395 37.500 0.00 0.00 0.00 3.18
4040 4736 7.148018 CCATGAGGCTCAAGTAATACAACAAAT 60.148 37.037 22.84 0.00 0.00 2.32
4072 4768 9.530633 CAAGTTGGTCTTTGTACTCCTATATAC 57.469 37.037 0.00 0.00 33.63 1.47
4104 4800 3.559171 GGATGTGGTCCTGCTTTGTCTTA 60.559 47.826 0.00 0.00 44.16 2.10
4154 4851 3.181465 ACTGCGGGGATGTTGAGTATAAG 60.181 47.826 0.00 0.00 0.00 1.73
4213 4914 3.194755 TCTGTCAGCTTGCCTTCGTATTA 59.805 43.478 0.00 0.00 0.00 0.98
4217 4918 0.601311 GTCTGTCAGCTTGCCTTCGT 60.601 55.000 0.00 0.00 0.00 3.85
4247 4948 1.138047 GCATCGACCGTTACGACTGG 61.138 60.000 6.24 0.00 42.37 4.00
4331 5032 0.241749 TCGGCTACATCGACAAACGT 59.758 50.000 0.00 0.00 43.13 3.99
4458 5162 2.484203 GACTAACTCGGCGCGTCT 59.516 61.111 9.90 0.00 0.00 4.18
4485 5189 1.337823 GCACCACTACTTCGACACCAT 60.338 52.381 0.00 0.00 0.00 3.55
4598 5302 2.585247 GTCTACGCATGCCCGGTC 60.585 66.667 13.15 0.00 0.00 4.79
4616 5320 1.600957 TCGTCAACTTCGTCTTCGTCT 59.399 47.619 0.00 0.00 38.33 4.18
4713 5417 1.448013 GCAAGTCCCAGTCTACGCC 60.448 63.158 0.00 0.00 0.00 5.68
4739 5444 2.810650 GACTTCTTCGACATGGCGTAT 58.189 47.619 22.59 0.00 0.00 3.06
4827 5533 2.094182 GCTTCATCTACTCCGACAACCA 60.094 50.000 0.00 0.00 0.00 3.67
4853 5559 2.005960 GCGTCGCTGTCATCTACCCT 62.006 60.000 10.68 0.00 0.00 4.34
4865 5571 4.961511 TTTGTCGCCAGCGTCGCT 62.962 61.111 15.47 15.47 40.77 4.93
4880 5586 2.417719 GTCTTCGTCCAGCATCAGTTT 58.582 47.619 0.00 0.00 0.00 2.66
4886 5592 1.645034 CATTCGTCTTCGTCCAGCAT 58.355 50.000 0.00 0.00 38.33 3.79
4923 5629 1.452953 CGCTACCCTCATAGACGCCA 61.453 60.000 0.00 0.00 0.00 5.69
4928 5634 1.113517 GCCACCGCTACCCTCATAGA 61.114 60.000 0.00 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.