Multiple sequence alignment - TraesCS6B01G107900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G107900 chr6B 100.000 2765 0 0 1 2765 88499503 88496739 0.000000e+00 5107.0
1 TraesCS6B01G107900 chr6B 92.969 1024 60 4 846 1858 88572990 88571968 0.000000e+00 1482.0
2 TraesCS6B01G107900 chr6B 82.759 319 49 5 194 511 576858117 576857804 2.100000e-71 279.0
3 TraesCS6B01G107900 chr6B 92.857 98 3 2 34 130 88499409 88499315 3.710000e-29 139.0
4 TraesCS6B01G107900 chr6B 92.857 98 3 2 95 189 88499470 88499374 3.710000e-29 139.0
5 TraesCS6B01G107900 chr6A 92.292 1453 79 8 846 2286 49132122 49130691 0.000000e+00 2032.0
6 TraesCS6B01G107900 chr6A 87.123 497 37 9 2286 2763 49130619 49130131 3.130000e-149 538.0
7 TraesCS6B01G107900 chr6D 93.199 1088 49 14 800 1866 37736049 37734966 0.000000e+00 1576.0
8 TraesCS6B01G107900 chr6D 91.723 1039 65 9 846 1867 37881351 37880317 0.000000e+00 1423.0
9 TraesCS6B01G107900 chr6D 91.033 1026 69 8 861 1867 37839236 37838215 0.000000e+00 1363.0
10 TraesCS6B01G107900 chr6D 92.877 716 28 8 2068 2763 37715530 37714818 0.000000e+00 1018.0
11 TraesCS6B01G107900 chr3B 87.669 665 42 16 95 746 706222142 706221505 0.000000e+00 737.0
12 TraesCS6B01G107900 chr3A 85.106 658 55 18 95 748 669777751 669777133 1.400000e-177 632.0
13 TraesCS6B01G107900 chr3A 94.000 100 5 1 4 103 669777781 669777683 1.720000e-32 150.0
14 TraesCS6B01G107900 chr2B 84.000 200 23 8 556 754 34560862 34560671 1.690000e-42 183.0
15 TraesCS6B01G107900 chr1B 82.075 212 25 7 556 765 628112964 628113164 4.740000e-38 169.0
16 TraesCS6B01G107900 chr4A 88.393 112 12 1 645 756 739160854 739160744 1.730000e-27 134.0
17 TraesCS6B01G107900 chr4B 79.839 124 23 2 644 767 366931589 366931468 3.790000e-14 89.8
18 TraesCS6B01G107900 chr5D 92.982 57 2 2 704 759 294610607 294610552 6.350000e-12 82.4
19 TraesCS6B01G107900 chr7A 92.857 56 2 2 707 761 97241502 97241556 2.280000e-11 80.5
20 TraesCS6B01G107900 chr5B 92.727 55 2 2 707 760 642936218 642936271 8.210000e-11 78.7
21 TraesCS6B01G107900 chr1D 92.593 54 2 2 704 756 442676495 442676443 2.950000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G107900 chr6B 88496739 88499503 2764 True 1795 5107 95.2380 1 2765 3 chr6B.!!$R3 2764
1 TraesCS6B01G107900 chr6B 88571968 88572990 1022 True 1482 1482 92.9690 846 1858 1 chr6B.!!$R1 1012
2 TraesCS6B01G107900 chr6A 49130131 49132122 1991 True 1285 2032 89.7075 846 2763 2 chr6A.!!$R1 1917
3 TraesCS6B01G107900 chr6D 37734966 37736049 1083 True 1576 1576 93.1990 800 1866 1 chr6D.!!$R2 1066
4 TraesCS6B01G107900 chr6D 37880317 37881351 1034 True 1423 1423 91.7230 846 1867 1 chr6D.!!$R4 1021
5 TraesCS6B01G107900 chr6D 37838215 37839236 1021 True 1363 1363 91.0330 861 1867 1 chr6D.!!$R3 1006
6 TraesCS6B01G107900 chr6D 37714818 37715530 712 True 1018 1018 92.8770 2068 2763 1 chr6D.!!$R1 695
7 TraesCS6B01G107900 chr3B 706221505 706222142 637 True 737 737 87.6690 95 746 1 chr3B.!!$R1 651
8 TraesCS6B01G107900 chr3A 669777133 669777781 648 True 391 632 89.5530 4 748 2 chr3A.!!$R1 744

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
177 181 0.031857 CCCACAAACGAATGCAAGCA 59.968 50.0 0.0 0.0 0.00 3.91 F
646 650 0.033796 AGGGACAGATACGAACCCGA 60.034 55.0 0.0 0.0 44.57 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1169 1191 0.249155 GTCGGCGTTCGGGAATATGA 60.249 55.000 6.85 0.0 39.77 2.15 R
2581 2820 1.621814 GCGGGCCCTCACTAACATATA 59.378 52.381 22.43 0.0 0.00 0.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.201921 GCAAACTCCATTACGTGCTCG 60.202 52.381 6.63 6.63 43.34 5.03
39 40 2.908626 CGTGCTCGTTTTGCTAAATTCC 59.091 45.455 0.00 0.00 0.00 3.01
40 41 3.242518 GTGCTCGTTTTGCTAAATTCCC 58.757 45.455 0.00 0.00 0.00 3.97
41 42 2.230266 TGCTCGTTTTGCTAAATTCCCC 59.770 45.455 0.00 0.00 0.00 4.81
42 43 2.230266 GCTCGTTTTGCTAAATTCCCCA 59.770 45.455 0.00 0.00 0.00 4.96
43 44 3.833442 CTCGTTTTGCTAAATTCCCCAC 58.167 45.455 0.00 0.00 0.00 4.61
44 45 3.223435 TCGTTTTGCTAAATTCCCCACA 58.777 40.909 0.00 0.00 0.00 4.17
45 46 3.637229 TCGTTTTGCTAAATTCCCCACAA 59.363 39.130 0.00 0.00 0.00 3.33
46 47 4.099573 TCGTTTTGCTAAATTCCCCACAAA 59.900 37.500 0.00 0.00 0.00 2.83
47 48 4.210328 CGTTTTGCTAAATTCCCCACAAAC 59.790 41.667 0.00 0.00 0.00 2.93
48 49 3.651803 TTGCTAAATTCCCCACAAACG 57.348 42.857 0.00 0.00 0.00 3.60
49 50 2.865079 TGCTAAATTCCCCACAAACGA 58.135 42.857 0.00 0.00 0.00 3.85
50 51 3.223435 TGCTAAATTCCCCACAAACGAA 58.777 40.909 0.00 0.00 0.00 3.85
51 52 3.004944 TGCTAAATTCCCCACAAACGAAC 59.995 43.478 0.00 0.00 0.00 3.95
52 53 3.004944 GCTAAATTCCCCACAAACGAACA 59.995 43.478 0.00 0.00 0.00 3.18
53 54 3.446310 AAATTCCCCACAAACGAACAC 57.554 42.857 0.00 0.00 0.00 3.32
54 55 2.060050 ATTCCCCACAAACGAACACA 57.940 45.000 0.00 0.00 0.00 3.72
55 56 1.835494 TTCCCCACAAACGAACACAA 58.165 45.000 0.00 0.00 0.00 3.33
56 57 1.384525 TCCCCACAAACGAACACAAG 58.615 50.000 0.00 0.00 0.00 3.16
57 58 0.248866 CCCCACAAACGAACACAAGC 60.249 55.000 0.00 0.00 0.00 4.01
58 59 0.453793 CCCACAAACGAACACAAGCA 59.546 50.000 0.00 0.00 0.00 3.91
59 60 1.533756 CCCACAAACGAACACAAGCAG 60.534 52.381 0.00 0.00 0.00 4.24
60 61 1.191096 CACAAACGAACACAAGCAGC 58.809 50.000 0.00 0.00 0.00 5.25
61 62 0.248054 ACAAACGAACACAAGCAGCG 60.248 50.000 0.00 0.00 0.00 5.18
62 63 0.929824 CAAACGAACACAAGCAGCGG 60.930 55.000 0.00 0.00 0.00 5.52
63 64 2.662091 AAACGAACACAAGCAGCGGC 62.662 55.000 0.00 0.00 41.61 6.53
64 65 4.389576 CGAACACAAGCAGCGGCC 62.390 66.667 4.82 0.00 42.56 6.13
65 66 4.389576 GAACACAAGCAGCGGCCG 62.390 66.667 24.05 24.05 42.56 6.13
76 77 3.809775 GCGGCCGCACAATAAGCA 61.810 61.111 43.55 0.00 41.49 3.91
77 78 2.874019 CGGCCGCACAATAAGCAA 59.126 55.556 14.67 0.00 0.00 3.91
78 79 1.514014 CGGCCGCACAATAAGCAAC 60.514 57.895 14.67 0.00 0.00 4.17
79 80 1.153842 GGCCGCACAATAAGCAACC 60.154 57.895 0.00 0.00 0.00 3.77
80 81 1.153842 GCCGCACAATAAGCAACCC 60.154 57.895 0.00 0.00 0.00 4.11
81 82 1.872197 GCCGCACAATAAGCAACCCA 61.872 55.000 0.00 0.00 0.00 4.51
82 83 0.600557 CCGCACAATAAGCAACCCAA 59.399 50.000 0.00 0.00 0.00 4.12
83 84 1.402720 CCGCACAATAAGCAACCCAAG 60.403 52.381 0.00 0.00 0.00 3.61
84 85 1.713597 GCACAATAAGCAACCCAAGC 58.286 50.000 0.00 0.00 0.00 4.01
85 86 1.000731 GCACAATAAGCAACCCAAGCA 59.999 47.619 0.00 0.00 0.00 3.91
86 87 2.927871 GCACAATAAGCAACCCAAGCAG 60.928 50.000 0.00 0.00 0.00 4.24
87 88 1.273327 ACAATAAGCAACCCAAGCAGC 59.727 47.619 0.00 0.00 0.00 5.25
88 89 1.273048 CAATAAGCAACCCAAGCAGCA 59.727 47.619 0.00 0.00 0.00 4.41
89 90 1.180029 ATAAGCAACCCAAGCAGCAG 58.820 50.000 0.00 0.00 0.00 4.24
90 91 1.526575 TAAGCAACCCAAGCAGCAGC 61.527 55.000 0.00 0.00 42.56 5.25
149 153 3.608662 GCAACCCAAGCAGCAGCA 61.609 61.111 3.17 0.00 45.49 4.41
161 165 1.228956 AGCAGCAGCAAATTCCCCA 60.229 52.632 3.17 0.00 45.49 4.96
162 166 1.079612 GCAGCAGCAAATTCCCCAC 60.080 57.895 0.00 0.00 41.58 4.61
163 167 1.818959 GCAGCAGCAAATTCCCCACA 61.819 55.000 0.00 0.00 41.58 4.17
164 168 0.680618 CAGCAGCAAATTCCCCACAA 59.319 50.000 0.00 0.00 0.00 3.33
165 169 1.070445 CAGCAGCAAATTCCCCACAAA 59.930 47.619 0.00 0.00 0.00 2.83
166 170 1.070601 AGCAGCAAATTCCCCACAAAC 59.929 47.619 0.00 0.00 0.00 2.93
167 171 1.782044 CAGCAAATTCCCCACAAACG 58.218 50.000 0.00 0.00 0.00 3.60
168 172 1.339610 CAGCAAATTCCCCACAAACGA 59.660 47.619 0.00 0.00 0.00 3.85
171 175 2.736192 GCAAATTCCCCACAAACGAATG 59.264 45.455 0.00 0.00 0.00 2.67
172 176 2.736192 CAAATTCCCCACAAACGAATGC 59.264 45.455 0.00 0.00 0.00 3.56
173 177 1.626686 ATTCCCCACAAACGAATGCA 58.373 45.000 0.00 0.00 0.00 3.96
174 178 1.403814 TTCCCCACAAACGAATGCAA 58.596 45.000 0.00 0.00 0.00 4.08
175 179 0.958091 TCCCCACAAACGAATGCAAG 59.042 50.000 0.00 0.00 0.00 4.01
176 180 0.667184 CCCCACAAACGAATGCAAGC 60.667 55.000 0.00 0.00 0.00 4.01
177 181 0.031857 CCCACAAACGAATGCAAGCA 59.968 50.000 0.00 0.00 0.00 3.91
179 183 0.780002 CACAAACGAATGCAAGCAGC 59.220 50.000 0.00 0.00 45.96 5.25
180 184 0.318955 ACAAACGAATGCAAGCAGCC 60.319 50.000 0.00 0.00 44.83 4.85
181 185 1.081242 AAACGAATGCAAGCAGCCG 60.081 52.632 14.36 14.36 44.83 5.52
182 186 3.615536 AACGAATGCAAGCAGCCGC 62.616 57.895 15.41 0.00 44.83 6.53
183 187 4.842091 CGAATGCAAGCAGCCGCC 62.842 66.667 0.00 0.00 44.83 6.13
184 188 3.751246 GAATGCAAGCAGCCGCCA 61.751 61.111 0.00 0.00 44.83 5.69
185 189 3.976902 GAATGCAAGCAGCCGCCAC 62.977 63.158 0.00 0.00 44.83 5.01
246 250 0.966179 TGCGTCTGTGCTTCCTTCTA 59.034 50.000 0.00 0.00 35.36 2.10
279 283 2.093973 CCAGCTAGATCCAAACTCGTGT 60.094 50.000 0.00 0.00 0.00 4.49
303 307 4.834453 CTCTCCCAGCCGCTGCAG 62.834 72.222 15.36 10.11 41.13 4.41
318 322 4.864334 CAGCCATGCCCCGACCTC 62.864 72.222 0.00 0.00 0.00 3.85
321 325 4.838152 CCATGCCCCGACCTCACG 62.838 72.222 0.00 0.00 0.00 4.35
330 334 3.681835 GACCTCACGGCGACCACT 61.682 66.667 16.62 0.00 0.00 4.00
331 335 3.628280 GACCTCACGGCGACCACTC 62.628 68.421 16.62 0.00 0.00 3.51
332 336 4.436998 CCTCACGGCGACCACTCC 62.437 72.222 16.62 0.00 0.00 3.85
333 337 3.374402 CTCACGGCGACCACTCCT 61.374 66.667 16.62 0.00 0.00 3.69
334 338 3.343788 CTCACGGCGACCACTCCTC 62.344 68.421 16.62 0.00 0.00 3.71
335 339 4.436998 CACGGCGACCACTCCTCC 62.437 72.222 16.62 0.00 0.00 4.30
338 342 3.003763 GGCGACCACTCCTCCCTT 61.004 66.667 0.00 0.00 0.00 3.95
339 343 2.579738 GCGACCACTCCTCCCTTC 59.420 66.667 0.00 0.00 0.00 3.46
340 344 1.985116 GCGACCACTCCTCCCTTCT 60.985 63.158 0.00 0.00 0.00 2.85
341 345 1.950973 GCGACCACTCCTCCCTTCTC 61.951 65.000 0.00 0.00 0.00 2.87
342 346 1.324005 CGACCACTCCTCCCTTCTCC 61.324 65.000 0.00 0.00 0.00 3.71
343 347 0.041982 GACCACTCCTCCCTTCTCCT 59.958 60.000 0.00 0.00 0.00 3.69
344 348 0.041982 ACCACTCCTCCCTTCTCCTC 59.958 60.000 0.00 0.00 0.00 3.71
345 349 0.689412 CCACTCCTCCCTTCTCCTCC 60.689 65.000 0.00 0.00 0.00 4.30
346 350 0.338120 CACTCCTCCCTTCTCCTCCT 59.662 60.000 0.00 0.00 0.00 3.69
347 351 1.097722 ACTCCTCCCTTCTCCTCCTT 58.902 55.000 0.00 0.00 0.00 3.36
348 352 1.007842 ACTCCTCCCTTCTCCTCCTTC 59.992 57.143 0.00 0.00 0.00 3.46
349 353 1.007721 CTCCTCCCTTCTCCTCCTTCA 59.992 57.143 0.00 0.00 0.00 3.02
350 354 1.653918 TCCTCCCTTCTCCTCCTTCAT 59.346 52.381 0.00 0.00 0.00 2.57
351 355 2.865809 TCCTCCCTTCTCCTCCTTCATA 59.134 50.000 0.00 0.00 0.00 2.15
352 356 3.116939 TCCTCCCTTCTCCTCCTTCATAG 60.117 52.174 0.00 0.00 0.00 2.23
353 357 3.238597 CTCCCTTCTCCTCCTTCATAGG 58.761 54.545 0.00 0.00 43.46 2.57
354 358 2.592512 TCCCTTCTCCTCCTTCATAGGT 59.407 50.000 0.00 0.00 42.60 3.08
355 359 2.703007 CCCTTCTCCTCCTTCATAGGTG 59.297 54.545 0.00 0.00 42.60 4.00
356 360 2.103941 CCTTCTCCTCCTTCATAGGTGC 59.896 54.545 0.00 0.00 42.60 5.01
357 361 1.794714 TCTCCTCCTTCATAGGTGCC 58.205 55.000 0.00 0.00 42.60 5.01
358 362 0.390860 CTCCTCCTTCATAGGTGCCG 59.609 60.000 0.00 0.00 42.60 5.69
359 363 0.325296 TCCTCCTTCATAGGTGCCGT 60.325 55.000 0.00 0.00 42.60 5.68
360 364 1.063492 TCCTCCTTCATAGGTGCCGTA 60.063 52.381 0.00 0.00 42.60 4.02
361 365 1.341531 CCTCCTTCATAGGTGCCGTAG 59.658 57.143 0.00 0.00 42.60 3.51
362 366 3.989104 CCTTCATAGGTGCCGTAGG 57.011 57.895 0.00 0.00 44.10 3.18
363 367 1.410004 CCTTCATAGGTGCCGTAGGA 58.590 55.000 0.00 0.00 44.03 2.94
364 368 1.341531 CCTTCATAGGTGCCGTAGGAG 59.658 57.143 0.00 0.00 44.03 3.69
365 369 4.488660 CCTTCATAGGTGCCGTAGGAGC 62.489 59.091 0.00 0.00 44.03 4.70
374 378 3.584052 CGTAGGAGCTCCGGACGG 61.584 72.222 36.44 25.02 42.56 4.79
375 379 3.902086 GTAGGAGCTCCGGACGGC 61.902 72.222 26.95 3.10 42.08 5.68
384 388 4.657824 CCGGACGGCGTCACACTT 62.658 66.667 37.13 2.42 33.68 3.16
385 389 3.403057 CGGACGGCGTCACACTTG 61.403 66.667 37.13 17.42 33.68 3.16
386 390 2.028484 GGACGGCGTCACACTTGA 59.972 61.111 37.13 0.00 33.68 3.02
387 391 2.022129 GGACGGCGTCACACTTGAG 61.022 63.158 37.13 0.00 33.68 3.02
388 392 2.022129 GACGGCGTCACACTTGAGG 61.022 63.158 33.07 0.00 40.08 3.86
389 393 2.738521 CGGCGTCACACTTGAGGG 60.739 66.667 0.00 0.00 37.97 4.30
390 394 2.358737 GGCGTCACACTTGAGGGG 60.359 66.667 0.00 0.00 37.97 4.79
391 395 3.050275 GCGTCACACTTGAGGGGC 61.050 66.667 0.00 0.00 37.97 5.80
392 396 2.738521 CGTCACACTTGAGGGGCG 60.739 66.667 0.00 0.00 34.54 6.13
393 397 3.050275 GTCACACTTGAGGGGCGC 61.050 66.667 0.00 0.00 30.10 6.53
394 398 4.680237 TCACACTTGAGGGGCGCG 62.680 66.667 0.00 0.00 0.00 6.86
395 399 4.680237 CACACTTGAGGGGCGCGA 62.680 66.667 12.10 0.00 0.00 5.87
396 400 4.379243 ACACTTGAGGGGCGCGAG 62.379 66.667 12.10 0.00 0.00 5.03
435 439 2.585247 CGGCGTCGGGAAGGAATC 60.585 66.667 0.00 0.00 0.00 2.52
444 448 3.819188 GAAGGAATCCAGGCAGCG 58.181 61.111 0.61 0.00 0.00 5.18
445 449 1.821332 GAAGGAATCCAGGCAGCGG 60.821 63.158 0.61 0.00 0.00 5.52
446 450 2.257409 GAAGGAATCCAGGCAGCGGA 62.257 60.000 0.61 0.00 36.84 5.54
447 451 2.203126 GGAATCCAGGCAGCGGAG 60.203 66.667 0.00 0.00 35.56 4.63
461 465 3.840831 CGGAGCTCCACATGAAGAA 57.159 52.632 31.67 0.00 35.14 2.52
462 466 1.649664 CGGAGCTCCACATGAAGAAG 58.350 55.000 31.67 8.04 35.14 2.85
463 467 1.066573 CGGAGCTCCACATGAAGAAGT 60.067 52.381 31.67 0.00 35.14 3.01
464 468 2.354259 GGAGCTCCACATGAAGAAGTG 58.646 52.381 28.43 0.00 35.64 3.16
470 474 1.442769 CACATGAAGAAGTGGGACGG 58.557 55.000 0.00 0.00 32.24 4.79
471 475 0.324943 ACATGAAGAAGTGGGACGGG 59.675 55.000 0.00 0.00 0.00 5.28
472 476 0.324943 CATGAAGAAGTGGGACGGGT 59.675 55.000 0.00 0.00 0.00 5.28
473 477 0.324943 ATGAAGAAGTGGGACGGGTG 59.675 55.000 0.00 0.00 0.00 4.61
474 478 1.003718 GAAGAAGTGGGACGGGTGG 60.004 63.158 0.00 0.00 0.00 4.61
475 479 1.460689 AAGAAGTGGGACGGGTGGA 60.461 57.895 0.00 0.00 0.00 4.02
476 480 0.840722 AAGAAGTGGGACGGGTGGAT 60.841 55.000 0.00 0.00 0.00 3.41
477 481 1.221021 GAAGTGGGACGGGTGGATC 59.779 63.158 0.00 0.00 0.00 3.36
478 482 2.253403 GAAGTGGGACGGGTGGATCC 62.253 65.000 4.20 4.20 0.00 3.36
487 491 4.388499 GGTGGATCCGGCACACGT 62.388 66.667 7.39 0.00 42.24 4.49
488 492 2.574929 GTGGATCCGGCACACGTA 59.425 61.111 7.39 0.00 42.24 3.57
489 493 1.518572 GTGGATCCGGCACACGTAG 60.519 63.158 7.39 0.00 42.24 3.51
490 494 2.585247 GGATCCGGCACACGTAGC 60.585 66.667 0.00 3.72 42.24 3.58
491 495 2.494918 GATCCGGCACACGTAGCT 59.505 61.111 11.34 0.00 42.24 3.32
492 496 1.878522 GATCCGGCACACGTAGCTG 60.879 63.158 12.66 12.66 42.24 4.24
493 497 4.735132 TCCGGCACACGTAGCTGC 62.735 66.667 13.84 9.01 42.24 5.25
494 498 4.742201 CCGGCACACGTAGCTGCT 62.742 66.667 7.57 7.57 42.24 4.24
495 499 3.181967 CGGCACACGTAGCTGCTC 61.182 66.667 4.91 0.00 37.93 4.26
496 500 3.181967 GGCACACGTAGCTGCTCG 61.182 66.667 4.91 12.43 33.63 5.03
497 501 3.181967 GCACACGTAGCTGCTCGG 61.182 66.667 19.94 11.09 0.00 4.63
498 502 2.566529 CACACGTAGCTGCTCGGA 59.433 61.111 19.94 0.00 0.00 4.55
499 503 1.139734 CACACGTAGCTGCTCGGAT 59.860 57.895 19.94 9.07 0.00 4.18
500 504 0.867753 CACACGTAGCTGCTCGGATC 60.868 60.000 19.94 0.00 0.00 3.36
501 505 1.299468 CACGTAGCTGCTCGGATCC 60.299 63.158 19.94 0.00 0.00 3.36
502 506 2.050895 CGTAGCTGCTCGGATCCG 60.051 66.667 28.62 28.62 41.35 4.18
503 507 2.835705 CGTAGCTGCTCGGATCCGT 61.836 63.158 32.15 15.54 40.74 4.69
504 508 1.008309 GTAGCTGCTCGGATCCGTC 60.008 63.158 32.15 24.13 40.74 4.79
505 509 2.194212 TAGCTGCTCGGATCCGTCC 61.194 63.158 32.15 23.31 41.40 4.79
513 517 3.184206 GGATCCGTCCGGTTTTGC 58.816 61.111 0.00 0.00 34.13 3.68
514 518 2.746803 GGATCCGTCCGGTTTTGCG 61.747 63.158 0.00 0.00 34.13 4.85
515 519 3.376914 GATCCGTCCGGTTTTGCGC 62.377 63.158 0.00 0.00 36.47 6.09
516 520 4.912485 TCCGTCCGGTTTTGCGCA 62.912 61.111 5.66 5.66 36.47 6.09
517 521 4.676586 CCGTCCGGTTTTGCGCAC 62.677 66.667 11.12 0.00 0.00 5.34
523 527 4.307908 GGTTTTGCGCACGCGACT 62.308 61.111 15.93 0.00 45.51 4.18
524 528 3.085010 GTTTTGCGCACGCGACTG 61.085 61.111 15.93 1.64 45.51 3.51
525 529 4.954680 TTTTGCGCACGCGACTGC 62.955 61.111 15.93 13.18 45.51 4.40
536 540 3.726517 CGACTGCGTTTGGGGCTG 61.727 66.667 0.00 0.00 35.72 4.85
537 541 2.594592 GACTGCGTTTGGGGCTGT 60.595 61.111 0.00 0.00 43.87 4.40
538 542 2.123897 ACTGCGTTTGGGGCTGTT 60.124 55.556 0.00 0.00 39.14 3.16
539 543 2.130073 GACTGCGTTTGGGGCTGTTC 62.130 60.000 0.00 0.00 41.72 3.18
540 544 3.254014 CTGCGTTTGGGGCTGTTCG 62.254 63.158 0.00 0.00 0.00 3.95
541 545 4.038080 GCGTTTGGGGCTGTTCGG 62.038 66.667 0.00 0.00 0.00 4.30
542 546 2.281208 CGTTTGGGGCTGTTCGGA 60.281 61.111 0.00 0.00 0.00 4.55
543 547 1.674322 CGTTTGGGGCTGTTCGGAT 60.674 57.895 0.00 0.00 0.00 4.18
544 548 1.883021 GTTTGGGGCTGTTCGGATG 59.117 57.895 0.00 0.00 0.00 3.51
545 549 1.304052 TTTGGGGCTGTTCGGATGG 60.304 57.895 0.00 0.00 0.00 3.51
546 550 1.784301 TTTGGGGCTGTTCGGATGGA 61.784 55.000 0.00 0.00 0.00 3.41
547 551 1.570857 TTGGGGCTGTTCGGATGGAT 61.571 55.000 0.00 0.00 0.00 3.41
548 552 1.227383 GGGGCTGTTCGGATGGATT 59.773 57.895 0.00 0.00 0.00 3.01
549 553 0.819666 GGGGCTGTTCGGATGGATTC 60.820 60.000 0.00 0.00 0.00 2.52
550 554 1.160329 GGGCTGTTCGGATGGATTCG 61.160 60.000 0.00 0.00 0.00 3.34
551 555 1.160329 GGCTGTTCGGATGGATTCGG 61.160 60.000 0.00 0.00 0.00 4.30
552 556 0.179084 GCTGTTCGGATGGATTCGGA 60.179 55.000 0.00 0.00 32.35 4.55
553 557 1.858091 CTGTTCGGATGGATTCGGAG 58.142 55.000 0.00 0.00 35.39 4.63
554 558 0.464036 TGTTCGGATGGATTCGGAGG 59.536 55.000 0.00 0.00 35.39 4.30
555 559 0.464452 GTTCGGATGGATTCGGAGGT 59.536 55.000 0.00 0.00 35.39 3.85
556 560 0.464036 TTCGGATGGATTCGGAGGTG 59.536 55.000 0.00 0.00 35.39 4.00
557 561 1.069765 CGGATGGATTCGGAGGTGG 59.930 63.158 0.00 0.00 0.00 4.61
558 562 1.399744 CGGATGGATTCGGAGGTGGA 61.400 60.000 0.00 0.00 0.00 4.02
559 563 1.059913 GGATGGATTCGGAGGTGGAT 58.940 55.000 0.00 0.00 0.00 3.41
560 564 1.421646 GGATGGATTCGGAGGTGGATT 59.578 52.381 0.00 0.00 0.00 3.01
561 565 2.158608 GGATGGATTCGGAGGTGGATTT 60.159 50.000 0.00 0.00 0.00 2.17
562 566 2.710096 TGGATTCGGAGGTGGATTTC 57.290 50.000 0.00 0.00 0.00 2.17
563 567 1.134521 TGGATTCGGAGGTGGATTTCG 60.135 52.381 0.00 0.00 0.00 3.46
564 568 1.134491 GGATTCGGAGGTGGATTTCGT 60.134 52.381 0.00 0.00 0.00 3.85
565 569 1.933853 GATTCGGAGGTGGATTTCGTG 59.066 52.381 0.00 0.00 0.00 4.35
566 570 0.036765 TTCGGAGGTGGATTTCGTGG 60.037 55.000 0.00 0.00 0.00 4.94
567 571 0.901114 TCGGAGGTGGATTTCGTGGA 60.901 55.000 0.00 0.00 0.00 4.02
568 572 0.460284 CGGAGGTGGATTTCGTGGAG 60.460 60.000 0.00 0.00 0.00 3.86
569 573 0.107654 GGAGGTGGATTTCGTGGAGG 60.108 60.000 0.00 0.00 0.00 4.30
570 574 0.107654 GAGGTGGATTTCGTGGAGGG 60.108 60.000 0.00 0.00 0.00 4.30
571 575 0.840722 AGGTGGATTTCGTGGAGGGT 60.841 55.000 0.00 0.00 0.00 4.34
572 576 0.676782 GGTGGATTTCGTGGAGGGTG 60.677 60.000 0.00 0.00 0.00 4.61
573 577 0.676782 GTGGATTTCGTGGAGGGTGG 60.677 60.000 0.00 0.00 0.00 4.61
574 578 1.077716 GGATTTCGTGGAGGGTGGG 60.078 63.158 0.00 0.00 0.00 4.61
575 579 1.559065 GGATTTCGTGGAGGGTGGGA 61.559 60.000 0.00 0.00 0.00 4.37
576 580 0.546598 GATTTCGTGGAGGGTGGGAT 59.453 55.000 0.00 0.00 0.00 3.85
577 581 0.546598 ATTTCGTGGAGGGTGGGATC 59.453 55.000 0.00 0.00 0.00 3.36
578 582 0.546747 TTTCGTGGAGGGTGGGATCT 60.547 55.000 0.00 0.00 0.00 2.75
579 583 0.337082 TTCGTGGAGGGTGGGATCTA 59.663 55.000 0.00 0.00 0.00 1.98
580 584 0.106167 TCGTGGAGGGTGGGATCTAG 60.106 60.000 0.00 0.00 0.00 2.43
581 585 1.115930 CGTGGAGGGTGGGATCTAGG 61.116 65.000 0.00 0.00 0.00 3.02
582 586 0.764752 GTGGAGGGTGGGATCTAGGG 60.765 65.000 0.00 0.00 0.00 3.53
583 587 0.934302 TGGAGGGTGGGATCTAGGGA 60.934 60.000 0.00 0.00 0.00 4.20
584 588 0.178918 GGAGGGTGGGATCTAGGGAG 60.179 65.000 0.00 0.00 0.00 4.30
585 589 0.861155 GAGGGTGGGATCTAGGGAGA 59.139 60.000 0.00 0.00 35.71 3.71
586 590 0.863956 AGGGTGGGATCTAGGGAGAG 59.136 60.000 0.00 0.00 34.35 3.20
587 591 0.834261 GGGTGGGATCTAGGGAGAGC 60.834 65.000 0.00 0.00 37.38 4.09
588 592 1.182385 GGTGGGATCTAGGGAGAGCG 61.182 65.000 0.00 0.00 39.11 5.03
589 593 1.153989 TGGGATCTAGGGAGAGCGG 59.846 63.158 0.00 0.00 39.11 5.52
590 594 2.279810 GGGATCTAGGGAGAGCGGC 61.280 68.421 0.00 0.00 39.11 6.53
591 595 2.631580 GGATCTAGGGAGAGCGGCG 61.632 68.421 0.51 0.51 39.11 6.46
592 596 2.598985 ATCTAGGGAGAGCGGCGG 60.599 66.667 9.78 0.00 34.35 6.13
612 616 3.717294 GTGGAGTGGTGCGGGGAT 61.717 66.667 0.00 0.00 0.00 3.85
613 617 3.716195 TGGAGTGGTGCGGGGATG 61.716 66.667 0.00 0.00 0.00 3.51
615 619 4.408821 GAGTGGTGCGGGGATGCA 62.409 66.667 0.00 0.00 43.95 3.96
621 625 3.375438 TGCGGGGATGCAAAAAGG 58.625 55.556 0.00 0.00 43.02 3.11
622 626 1.228706 TGCGGGGATGCAAAAAGGA 60.229 52.632 0.00 0.00 43.02 3.36
623 627 1.215382 GCGGGGATGCAAAAAGGAC 59.785 57.895 0.00 0.00 34.15 3.85
624 628 1.506262 CGGGGATGCAAAAAGGACG 59.494 57.895 0.00 0.00 0.00 4.79
625 629 0.958382 CGGGGATGCAAAAAGGACGA 60.958 55.000 0.00 0.00 0.00 4.20
626 630 0.811281 GGGGATGCAAAAAGGACGAG 59.189 55.000 0.00 0.00 0.00 4.18
627 631 1.613255 GGGGATGCAAAAAGGACGAGA 60.613 52.381 0.00 0.00 0.00 4.04
628 632 1.740025 GGGATGCAAAAAGGACGAGAG 59.260 52.381 0.00 0.00 0.00 3.20
629 633 1.740025 GGATGCAAAAAGGACGAGAGG 59.260 52.381 0.00 0.00 0.00 3.69
630 634 1.740025 GATGCAAAAAGGACGAGAGGG 59.260 52.381 0.00 0.00 0.00 4.30
631 635 0.762418 TGCAAAAAGGACGAGAGGGA 59.238 50.000 0.00 0.00 0.00 4.20
632 636 1.157585 GCAAAAAGGACGAGAGGGAC 58.842 55.000 0.00 0.00 0.00 4.46
633 637 1.542547 GCAAAAAGGACGAGAGGGACA 60.543 52.381 0.00 0.00 0.00 4.02
634 638 2.417719 CAAAAAGGACGAGAGGGACAG 58.582 52.381 0.00 0.00 0.00 3.51
635 639 2.011122 AAAAGGACGAGAGGGACAGA 57.989 50.000 0.00 0.00 0.00 3.41
636 640 2.239681 AAAGGACGAGAGGGACAGAT 57.760 50.000 0.00 0.00 0.00 2.90
637 641 3.383698 AAAGGACGAGAGGGACAGATA 57.616 47.619 0.00 0.00 0.00 1.98
638 642 2.351706 AGGACGAGAGGGACAGATAC 57.648 55.000 0.00 0.00 0.00 2.24
639 643 0.945813 GGACGAGAGGGACAGATACG 59.054 60.000 0.00 0.00 0.00 3.06
640 644 1.474677 GGACGAGAGGGACAGATACGA 60.475 57.143 0.00 0.00 0.00 3.43
641 645 2.286872 GACGAGAGGGACAGATACGAA 58.713 52.381 0.00 0.00 0.00 3.85
642 646 2.015587 ACGAGAGGGACAGATACGAAC 58.984 52.381 0.00 0.00 0.00 3.95
643 647 1.334243 CGAGAGGGACAGATACGAACC 59.666 57.143 0.00 0.00 0.00 3.62
644 648 1.682323 GAGAGGGACAGATACGAACCC 59.318 57.143 0.00 0.00 40.71 4.11
645 649 0.384669 GAGGGACAGATACGAACCCG 59.615 60.000 0.00 0.00 44.57 5.28
646 650 0.033796 AGGGACAGATACGAACCCGA 60.034 55.000 0.00 0.00 44.57 5.14
647 651 0.101939 GGGACAGATACGAACCCGAC 59.898 60.000 0.00 0.00 39.50 4.79
648 652 0.813184 GGACAGATACGAACCCGACA 59.187 55.000 0.00 0.00 39.50 4.35
649 653 1.203052 GGACAGATACGAACCCGACAA 59.797 52.381 0.00 0.00 39.50 3.18
650 654 2.353011 GGACAGATACGAACCCGACAAA 60.353 50.000 0.00 0.00 39.50 2.83
651 655 3.319755 GACAGATACGAACCCGACAAAA 58.680 45.455 0.00 0.00 39.50 2.44
652 656 3.731089 ACAGATACGAACCCGACAAAAA 58.269 40.909 0.00 0.00 39.50 1.94
668 672 2.622064 AAAAAGCACCTGACTCTCGT 57.378 45.000 0.00 0.00 0.00 4.18
669 673 1.871080 AAAAGCACCTGACTCTCGTG 58.129 50.000 0.00 0.00 0.00 4.35
670 674 0.034059 AAAGCACCTGACTCTCGTGG 59.966 55.000 0.00 0.00 0.00 4.94
671 675 1.821061 AAGCACCTGACTCTCGTGGG 61.821 60.000 0.00 0.00 0.00 4.61
672 676 2.262915 CACCTGACTCTCGTGGGC 59.737 66.667 0.00 0.00 0.00 5.36
673 677 2.997897 ACCTGACTCTCGTGGGCC 60.998 66.667 0.00 0.00 0.00 5.80
674 678 4.135153 CCTGACTCTCGTGGGCCG 62.135 72.222 0.00 0.00 38.13 6.13
675 679 3.374402 CTGACTCTCGTGGGCCGT 61.374 66.667 0.00 0.00 37.94 5.68
676 680 2.034532 TGACTCTCGTGGGCCGTA 59.965 61.111 0.00 0.00 37.94 4.02
677 681 1.994507 CTGACTCTCGTGGGCCGTAG 61.995 65.000 0.00 0.00 37.94 3.51
690 694 2.499205 CGTAGGATGCGCAGGGAA 59.501 61.111 18.32 0.00 37.41 3.97
691 695 1.592669 CGTAGGATGCGCAGGGAAG 60.593 63.158 18.32 1.34 37.41 3.46
692 696 1.227674 GTAGGATGCGCAGGGAAGG 60.228 63.158 18.32 0.00 0.00 3.46
693 697 1.382557 TAGGATGCGCAGGGAAGGA 60.383 57.895 18.32 0.00 0.00 3.36
694 698 1.402896 TAGGATGCGCAGGGAAGGAG 61.403 60.000 18.32 0.00 0.00 3.69
695 699 2.586792 GATGCGCAGGGAAGGAGT 59.413 61.111 18.32 0.00 0.00 3.85
696 700 1.817099 GATGCGCAGGGAAGGAGTG 60.817 63.158 18.32 0.00 0.00 3.51
697 701 3.335356 ATGCGCAGGGAAGGAGTGG 62.335 63.158 18.32 0.00 0.00 4.00
698 702 4.021925 GCGCAGGGAAGGAGTGGT 62.022 66.667 0.30 0.00 0.00 4.16
699 703 2.266055 CGCAGGGAAGGAGTGGTC 59.734 66.667 0.00 0.00 0.00 4.02
700 704 2.266055 GCAGGGAAGGAGTGGTCG 59.734 66.667 0.00 0.00 0.00 4.79
701 705 2.283529 GCAGGGAAGGAGTGGTCGA 61.284 63.158 0.00 0.00 0.00 4.20
702 706 1.893786 CAGGGAAGGAGTGGTCGAG 59.106 63.158 0.00 0.00 0.00 4.04
703 707 1.305381 AGGGAAGGAGTGGTCGAGG 60.305 63.158 0.00 0.00 0.00 4.63
704 708 2.579738 GGAAGGAGTGGTCGAGGC 59.420 66.667 0.00 0.00 0.00 4.70
705 709 2.182030 GAAGGAGTGGTCGAGGCG 59.818 66.667 0.00 0.00 0.00 5.52
706 710 3.991536 GAAGGAGTGGTCGAGGCGC 62.992 68.421 0.00 0.00 0.00 6.53
724 728 3.818787 GGCCGCTCGGTTCGACTA 61.819 66.667 10.24 0.00 37.65 2.59
725 729 2.180017 GCCGCTCGGTTCGACTAA 59.820 61.111 10.24 0.00 37.65 2.24
726 730 1.444895 GCCGCTCGGTTCGACTAAA 60.445 57.895 10.24 0.00 37.65 1.85
727 731 0.804933 GCCGCTCGGTTCGACTAAAT 60.805 55.000 10.24 0.00 37.65 1.40
728 732 1.534595 GCCGCTCGGTTCGACTAAATA 60.535 52.381 10.24 0.00 37.65 1.40
729 733 2.382519 CCGCTCGGTTCGACTAAATAG 58.617 52.381 0.00 0.00 0.00 1.73
730 734 2.223433 CCGCTCGGTTCGACTAAATAGT 60.223 50.000 0.00 0.00 39.71 2.12
731 735 2.782192 CGCTCGGTTCGACTAAATAGTG 59.218 50.000 0.00 0.00 36.50 2.74
732 736 2.534757 GCTCGGTTCGACTAAATAGTGC 59.465 50.000 0.00 0.00 36.50 4.40
733 737 2.782192 CTCGGTTCGACTAAATAGTGCG 59.218 50.000 0.00 2.63 36.50 5.34
734 738 1.254570 CGGTTCGACTAAATAGTGCGC 59.745 52.381 0.00 0.00 36.50 6.09
735 739 1.254570 GGTTCGACTAAATAGTGCGCG 59.745 52.381 0.00 0.00 36.50 6.86
736 740 1.916000 GTTCGACTAAATAGTGCGCGT 59.084 47.619 8.43 0.00 36.50 6.01
737 741 1.541475 TCGACTAAATAGTGCGCGTG 58.459 50.000 8.43 0.00 36.50 5.34
738 742 0.044161 CGACTAAATAGTGCGCGTGC 60.044 55.000 15.48 15.48 43.20 5.34
749 753 3.676091 GCGCGTGCACTTTTAAGAT 57.324 47.368 17.66 0.00 42.15 2.40
750 754 1.963747 GCGCGTGCACTTTTAAGATT 58.036 45.000 17.66 0.00 42.15 2.40
751 755 2.315901 GCGCGTGCACTTTTAAGATTT 58.684 42.857 17.66 0.00 42.15 2.17
752 756 2.724174 GCGCGTGCACTTTTAAGATTTT 59.276 40.909 17.66 0.00 42.15 1.82
753 757 3.909574 GCGCGTGCACTTTTAAGATTTTA 59.090 39.130 17.66 0.00 42.15 1.52
754 758 4.029087 GCGCGTGCACTTTTAAGATTTTAG 59.971 41.667 17.66 0.00 42.15 1.85
755 759 4.553429 CGCGTGCACTTTTAAGATTTTAGG 59.447 41.667 16.19 0.00 0.00 2.69
756 760 5.615984 CGCGTGCACTTTTAAGATTTTAGGA 60.616 40.000 16.19 0.00 0.00 2.94
757 761 6.146898 GCGTGCACTTTTAAGATTTTAGGAA 58.853 36.000 16.19 0.00 0.00 3.36
758 762 6.639279 GCGTGCACTTTTAAGATTTTAGGAAA 59.361 34.615 16.19 0.00 0.00 3.13
759 763 7.168469 GCGTGCACTTTTAAGATTTTAGGAAAA 59.832 33.333 16.19 0.00 34.41 2.29
760 764 9.026074 CGTGCACTTTTAAGATTTTAGGAAAAA 57.974 29.630 16.19 0.00 38.87 1.94
782 786 5.356882 AAATATTCATGCCAATACGTCCG 57.643 39.130 0.00 0.00 0.00 4.79
783 787 2.613026 ATTCATGCCAATACGTCCGA 57.387 45.000 0.00 0.00 0.00 4.55
784 788 2.388310 TTCATGCCAATACGTCCGAA 57.612 45.000 0.00 0.00 0.00 4.30
785 789 2.388310 TCATGCCAATACGTCCGAAA 57.612 45.000 0.00 0.00 0.00 3.46
786 790 2.276201 TCATGCCAATACGTCCGAAAG 58.724 47.619 0.00 0.00 0.00 2.62
787 791 1.014352 ATGCCAATACGTCCGAAAGC 58.986 50.000 0.00 0.00 0.00 3.51
788 792 0.320858 TGCCAATACGTCCGAAAGCA 60.321 50.000 0.00 0.00 0.00 3.91
789 793 0.373716 GCCAATACGTCCGAAAGCAG 59.626 55.000 0.00 0.00 0.00 4.24
790 794 1.006832 CCAATACGTCCGAAAGCAGG 58.993 55.000 0.00 0.00 0.00 4.85
791 795 1.404986 CCAATACGTCCGAAAGCAGGA 60.405 52.381 0.00 0.00 34.99 3.86
792 796 1.927174 CAATACGTCCGAAAGCAGGAG 59.073 52.381 0.00 0.00 38.65 3.69
793 797 1.471119 ATACGTCCGAAAGCAGGAGA 58.529 50.000 0.00 0.00 38.65 3.71
794 798 1.471119 TACGTCCGAAAGCAGGAGAT 58.529 50.000 0.00 0.00 38.65 2.75
795 799 0.608640 ACGTCCGAAAGCAGGAGATT 59.391 50.000 0.00 0.00 38.65 2.40
796 800 1.002087 ACGTCCGAAAGCAGGAGATTT 59.998 47.619 0.00 0.00 38.65 2.17
797 801 1.661112 CGTCCGAAAGCAGGAGATTTC 59.339 52.381 0.00 0.00 44.50 2.17
805 809 1.895798 AGCAGGAGATTTCGAGACACA 59.104 47.619 0.00 0.00 0.00 3.72
832 836 4.217118 ACACAGCAGCTTCCTAATTCTTTG 59.783 41.667 0.00 0.00 0.00 2.77
835 839 4.021916 AGCAGCTTCCTAATTCTTTGCAT 58.978 39.130 0.00 0.00 33.00 3.96
836 840 4.097589 AGCAGCTTCCTAATTCTTTGCATC 59.902 41.667 0.00 0.00 33.00 3.91
841 845 5.105997 GCTTCCTAATTCTTTGCATCACAGT 60.106 40.000 0.00 0.00 0.00 3.55
842 846 6.571150 GCTTCCTAATTCTTTGCATCACAGTT 60.571 38.462 0.00 0.00 0.00 3.16
843 847 6.899393 TCCTAATTCTTTGCATCACAGTTT 57.101 33.333 0.00 0.00 0.00 2.66
927 935 1.521681 CGGATCCGTTTCAGGCTCC 60.522 63.158 26.35 0.00 41.83 4.70
928 936 1.602237 GGATCCGTTTCAGGCTCCA 59.398 57.895 0.00 0.00 44.02 3.86
1180 1202 1.185618 CCTCCGCCTCATATTCCCGA 61.186 60.000 0.00 0.00 0.00 5.14
1190 1212 1.397390 ATATTCCCGAACGCCGACCT 61.397 55.000 0.00 0.00 41.76 3.85
1258 1280 4.673298 CCGTGCAGGCGTACCACA 62.673 66.667 0.00 0.00 39.06 4.17
1384 1481 4.675029 CCGACGCCAAGAACCGGT 62.675 66.667 0.00 0.00 35.83 5.28
1389 1486 2.029964 GCCAAGAACCGGTCGACA 59.970 61.111 18.91 0.00 0.00 4.35
1420 1517 1.079405 GTGATCAGGAACGCCGGAA 60.079 57.895 5.05 0.00 41.77 4.30
1464 1561 3.003173 ACGGAGCTGGCAAGGCTA 61.003 61.111 0.73 0.00 40.40 3.93
1703 1825 3.506096 CTACGCGCTCGGACTCCA 61.506 66.667 5.73 0.00 40.69 3.86
1806 1936 9.177608 TGTTTTGATTCCAAGATCGATTTAGAT 57.822 29.630 0.00 0.00 33.23 1.98
1809 1939 9.830975 TTTGATTCCAAGATCGATTTAGATACA 57.169 29.630 0.00 0.00 33.23 2.29
1810 1940 9.830975 TTGATTCCAAGATCGATTTAGATACAA 57.169 29.630 0.00 2.71 0.00 2.41
1874 2014 9.173939 GAATTTAATGCAATAGTTCGATTCCAG 57.826 33.333 0.00 0.00 0.00 3.86
1880 2020 0.102481 TAGTTCGATTCCAGCCGAGC 59.898 55.000 0.00 0.00 36.11 5.03
1899 2039 4.033243 CGAGCAGATTTGATGTTTGATCGA 59.967 41.667 4.66 0.00 46.80 3.59
1907 2047 9.177608 AGATTTGATGTTTGATCGATTTCCTAA 57.822 29.630 0.00 0.00 0.00 2.69
1910 2050 9.787532 TTTGATGTTTGATCGATTTCCTAATTC 57.212 29.630 0.00 0.00 0.00 2.17
2004 2144 2.044123 AAAGAGGTTGGATCGGATGC 57.956 50.000 2.14 2.14 0.00 3.91
2005 2145 0.911769 AAGAGGTTGGATCGGATGCA 59.088 50.000 8.20 8.20 0.00 3.96
2027 2167 5.630680 GCATGAACCTTTGTAAACACATGAG 59.369 40.000 0.00 0.00 36.87 2.90
2090 2230 5.885230 TTTAGGTTGATGCAATGACTCTG 57.115 39.130 0.00 0.00 0.00 3.35
2091 2231 3.430042 AGGTTGATGCAATGACTCTGT 57.570 42.857 0.00 0.00 0.00 3.41
2098 2240 6.036577 TGATGCAATGACTCTGTAAGTGTA 57.963 37.500 0.00 0.00 41.37 2.90
2099 2241 6.643388 TGATGCAATGACTCTGTAAGTGTAT 58.357 36.000 0.00 0.00 41.37 2.29
2154 2296 9.107177 GCAGCTTTATCATCAGCATACTAATAT 57.893 33.333 0.00 0.00 38.61 1.28
2256 2398 6.103997 AGCATGCAATTTAATCTCAACCTTG 58.896 36.000 21.98 0.00 0.00 3.61
2388 2614 6.688073 ATATGAAACTAGATGATTCCCCGT 57.312 37.500 0.00 0.00 0.00 5.28
2527 2766 1.177401 GGGCCTTTGATGTTGAGGTC 58.823 55.000 0.84 0.00 34.42 3.85
2537 2776 4.893608 TGATGTTGAGGTCGATCTTTTCA 58.106 39.130 0.00 0.00 0.00 2.69
2581 2820 1.718396 CATGTGTGCATGTCGAGAGT 58.282 50.000 0.00 0.00 45.48 3.24
2599 2839 4.161102 AGAGTATATGTTAGTGAGGGCCC 58.839 47.826 16.46 16.46 0.00 5.80
2654 2895 9.014297 CAACCTTGGTTTCTCATTTTCTATAGT 57.986 33.333 1.76 0.00 0.00 2.12
2683 2925 9.613957 TTTTTGGTTGTACAAATATATGACACG 57.386 29.630 10.51 0.00 39.80 4.49
2741 2983 9.254133 CAACGACATTCAGATCATTACTTATCT 57.746 33.333 0.00 0.00 32.63 1.98
2764 3006 9.653287 ATCTCGAGTATAATTTTCAACAAGTCA 57.347 29.630 13.13 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.096976 CGTAATGGAGTTTGCCGCTG 59.903 55.000 0.00 0.00 0.00 5.18
1 2 0.321298 ACGTAATGGAGTTTGCCGCT 60.321 50.000 0.00 0.00 0.00 5.52
2 3 0.179200 CACGTAATGGAGTTTGCCGC 60.179 55.000 0.00 0.00 0.00 6.53
25 26 4.210328 CGTTTGTGGGGAATTTAGCAAAAC 59.790 41.667 0.00 0.00 0.00 2.43
38 39 0.248866 GCTTGTGTTCGTTTGTGGGG 60.249 55.000 0.00 0.00 0.00 4.96
39 40 0.453793 TGCTTGTGTTCGTTTGTGGG 59.546 50.000 0.00 0.00 0.00 4.61
40 41 1.826327 CTGCTTGTGTTCGTTTGTGG 58.174 50.000 0.00 0.00 0.00 4.17
41 42 1.191096 GCTGCTTGTGTTCGTTTGTG 58.809 50.000 0.00 0.00 0.00 3.33
42 43 0.248054 CGCTGCTTGTGTTCGTTTGT 60.248 50.000 0.00 0.00 0.00 2.83
43 44 0.929824 CCGCTGCTTGTGTTCGTTTG 60.930 55.000 0.00 0.00 0.00 2.93
44 45 1.355210 CCGCTGCTTGTGTTCGTTT 59.645 52.632 0.00 0.00 0.00 3.60
45 46 3.022287 CCGCTGCTTGTGTTCGTT 58.978 55.556 0.00 0.00 0.00 3.85
46 47 3.649986 GCCGCTGCTTGTGTTCGT 61.650 61.111 0.00 0.00 33.53 3.85
47 48 4.389576 GGCCGCTGCTTGTGTTCG 62.390 66.667 0.00 0.00 37.74 3.95
48 49 4.389576 CGGCCGCTGCTTGTGTTC 62.390 66.667 14.67 0.00 37.74 3.18
55 56 4.776322 TATTGTGCGGCCGCTGCT 62.776 61.111 45.79 30.08 42.51 4.24
56 57 3.739782 CTTATTGTGCGGCCGCTGC 62.740 63.158 45.79 36.67 42.51 5.25
57 58 2.404789 CTTATTGTGCGGCCGCTG 59.595 61.111 45.79 24.04 42.51 5.18
58 59 3.508840 GCTTATTGTGCGGCCGCT 61.509 61.111 45.79 30.82 42.51 5.52
59 60 3.335306 TTGCTTATTGTGCGGCCGC 62.335 57.895 42.35 42.35 42.35 6.53
60 61 1.514014 GTTGCTTATTGTGCGGCCG 60.514 57.895 24.05 24.05 0.00 6.13
61 62 1.153842 GGTTGCTTATTGTGCGGCC 60.154 57.895 0.00 0.00 0.00 6.13
62 63 1.153842 GGGTTGCTTATTGTGCGGC 60.154 57.895 0.00 0.00 0.00 6.53
63 64 0.600557 TTGGGTTGCTTATTGTGCGG 59.399 50.000 0.00 0.00 0.00 5.69
64 65 1.981254 CTTGGGTTGCTTATTGTGCG 58.019 50.000 0.00 0.00 0.00 5.34
65 66 1.000731 TGCTTGGGTTGCTTATTGTGC 59.999 47.619 0.00 0.00 0.00 4.57
66 67 2.927871 GCTGCTTGGGTTGCTTATTGTG 60.928 50.000 0.00 0.00 0.00 3.33
67 68 1.273327 GCTGCTTGGGTTGCTTATTGT 59.727 47.619 0.00 0.00 0.00 2.71
68 69 1.273048 TGCTGCTTGGGTTGCTTATTG 59.727 47.619 0.00 0.00 0.00 1.90
69 70 1.547372 CTGCTGCTTGGGTTGCTTATT 59.453 47.619 0.00 0.00 0.00 1.40
70 71 1.180029 CTGCTGCTTGGGTTGCTTAT 58.820 50.000 0.00 0.00 0.00 1.73
71 72 1.526575 GCTGCTGCTTGGGTTGCTTA 61.527 55.000 8.53 0.00 36.03 3.09
72 73 2.864471 GCTGCTGCTTGGGTTGCTT 61.864 57.895 8.53 0.00 36.03 3.91
73 74 3.300765 GCTGCTGCTTGGGTTGCT 61.301 61.111 8.53 0.00 36.03 3.91
74 75 4.712425 CGCTGCTGCTTGGGTTGC 62.712 66.667 14.03 0.00 36.97 4.17
75 76 4.047059 CCGCTGCTGCTTGGGTTG 62.047 66.667 14.03 0.00 36.97 3.77
79 80 2.775032 AATTTGCCGCTGCTGCTTGG 62.775 55.000 16.81 9.38 38.71 3.61
80 81 1.349259 GAATTTGCCGCTGCTGCTTG 61.349 55.000 16.81 5.86 38.71 4.01
81 82 1.080298 GAATTTGCCGCTGCTGCTT 60.080 52.632 16.81 3.32 38.71 3.91
82 83 2.570181 GAATTTGCCGCTGCTGCT 59.430 55.556 16.81 0.00 38.71 4.24
83 84 2.507769 GGAATTTGCCGCTGCTGC 60.508 61.111 9.23 9.23 38.71 5.25
84 85 2.182537 GGGAATTTGCCGCTGCTG 59.817 61.111 0.70 0.00 38.71 4.41
85 86 3.070576 GGGGAATTTGCCGCTGCT 61.071 61.111 0.70 0.00 37.84 4.24
86 87 3.381136 TGGGGAATTTGCCGCTGC 61.381 61.111 0.42 0.00 41.16 5.25
87 88 1.814772 TTGTGGGGAATTTGCCGCTG 61.815 55.000 0.42 0.00 41.16 5.18
88 89 1.118356 TTTGTGGGGAATTTGCCGCT 61.118 50.000 0.42 0.00 41.16 5.52
89 90 0.948623 GTTTGTGGGGAATTTGCCGC 60.949 55.000 0.42 0.00 40.97 6.53
90 91 0.665972 CGTTTGTGGGGAATTTGCCG 60.666 55.000 0.42 0.00 0.00 5.69
91 92 0.676736 TCGTTTGTGGGGAATTTGCC 59.323 50.000 0.00 0.00 0.00 4.52
92 93 2.131972 GTTCGTTTGTGGGGAATTTGC 58.868 47.619 0.00 0.00 0.00 3.68
93 94 2.389998 CGTTCGTTTGTGGGGAATTTG 58.610 47.619 0.00 0.00 0.00 2.32
94 95 1.269361 GCGTTCGTTTGTGGGGAATTT 60.269 47.619 0.00 0.00 0.00 1.82
95 96 0.312729 GCGTTCGTTTGTGGGGAATT 59.687 50.000 0.00 0.00 0.00 2.17
96 97 0.820074 TGCGTTCGTTTGTGGGGAAT 60.820 50.000 0.00 0.00 0.00 3.01
97 98 1.030488 TTGCGTTCGTTTGTGGGGAA 61.030 50.000 0.00 0.00 0.00 3.97
98 99 1.440938 CTTGCGTTCGTTTGTGGGGA 61.441 55.000 0.00 0.00 0.00 4.81
99 100 1.008995 CTTGCGTTCGTTTGTGGGG 60.009 57.895 0.00 0.00 0.00 4.96
149 153 1.698506 TCGTTTGTGGGGAATTTGCT 58.301 45.000 0.00 0.00 0.00 3.91
161 165 0.318955 GGCTGCTTGCATTCGTTTGT 60.319 50.000 0.00 0.00 45.15 2.83
162 166 1.339235 CGGCTGCTTGCATTCGTTTG 61.339 55.000 0.00 0.00 45.15 2.93
163 167 1.081242 CGGCTGCTTGCATTCGTTT 60.081 52.632 0.00 0.00 45.15 3.60
164 168 2.562912 CGGCTGCTTGCATTCGTT 59.437 55.556 0.00 0.00 45.15 3.85
165 169 4.107051 GCGGCTGCTTGCATTCGT 62.107 61.111 11.21 0.00 45.15 3.85
166 170 4.842091 GGCGGCTGCTTGCATTCG 62.842 66.667 18.85 11.33 45.15 3.34
167 171 3.751246 TGGCGGCTGCTTGCATTC 61.751 61.111 18.85 0.00 45.15 2.67
168 172 4.060038 GTGGCGGCTGCTTGCATT 62.060 61.111 18.85 0.00 45.15 3.56
171 175 3.976902 GATTGTGGCGGCTGCTTGC 62.977 63.158 18.85 8.44 42.25 4.01
172 176 1.870055 AAGATTGTGGCGGCTGCTTG 61.870 55.000 18.85 0.00 42.25 4.01
173 177 1.604593 AAGATTGTGGCGGCTGCTT 60.605 52.632 18.85 0.00 42.25 3.91
174 178 2.034687 AAGATTGTGGCGGCTGCT 59.965 55.556 18.85 0.00 42.25 4.24
175 179 2.180017 CAAGATTGTGGCGGCTGC 59.820 61.111 9.72 9.72 41.71 5.25
176 180 2.180017 GCAAGATTGTGGCGGCTG 59.820 61.111 11.43 0.00 0.00 4.85
177 181 2.034687 AGCAAGATTGTGGCGGCT 59.965 55.556 11.43 0.00 0.00 5.52
179 183 1.651240 CTGGAGCAAGATTGTGGCGG 61.651 60.000 0.00 0.00 0.00 6.13
180 184 0.674581 TCTGGAGCAAGATTGTGGCG 60.675 55.000 0.00 0.00 0.00 5.69
181 185 1.674962 GATCTGGAGCAAGATTGTGGC 59.325 52.381 0.00 0.00 37.03 5.01
182 186 1.938577 CGATCTGGAGCAAGATTGTGG 59.061 52.381 0.00 0.00 37.03 4.17
183 187 2.606725 GTCGATCTGGAGCAAGATTGTG 59.393 50.000 9.77 0.98 38.66 3.33
184 188 2.736719 CGTCGATCTGGAGCAAGATTGT 60.737 50.000 9.77 0.00 38.66 2.71
185 189 1.857217 CGTCGATCTGGAGCAAGATTG 59.143 52.381 0.00 5.39 37.03 2.67
186 190 1.751351 TCGTCGATCTGGAGCAAGATT 59.249 47.619 0.00 0.00 37.03 2.40
187 191 1.066303 GTCGTCGATCTGGAGCAAGAT 59.934 52.381 0.00 0.00 39.66 2.40
279 283 1.990060 CGGCTGGGAGAGGAGGAAA 60.990 63.158 0.00 0.00 0.00 3.13
304 308 4.838152 CGTGAGGTCGGGGCATGG 62.838 72.222 0.00 0.00 0.00 3.66
316 320 3.343788 GAGGAGTGGTCGCCGTGAG 62.344 68.421 0.00 0.00 38.56 3.51
317 321 3.371063 GAGGAGTGGTCGCCGTGA 61.371 66.667 0.00 0.00 38.56 4.35
318 322 4.436998 GGAGGAGTGGTCGCCGTG 62.437 72.222 0.00 0.00 38.56 4.94
321 325 3.003763 AAGGGAGGAGTGGTCGCC 61.004 66.667 0.00 0.00 0.00 5.54
322 326 1.950973 GAGAAGGGAGGAGTGGTCGC 61.951 65.000 0.00 0.00 0.00 5.19
323 327 1.324005 GGAGAAGGGAGGAGTGGTCG 61.324 65.000 0.00 0.00 0.00 4.79
324 328 0.041982 AGGAGAAGGGAGGAGTGGTC 59.958 60.000 0.00 0.00 0.00 4.02
325 329 0.041982 GAGGAGAAGGGAGGAGTGGT 59.958 60.000 0.00 0.00 0.00 4.16
326 330 0.689412 GGAGGAGAAGGGAGGAGTGG 60.689 65.000 0.00 0.00 0.00 4.00
327 331 0.338120 AGGAGGAGAAGGGAGGAGTG 59.662 60.000 0.00 0.00 0.00 3.51
328 332 1.007842 GAAGGAGGAGAAGGGAGGAGT 59.992 57.143 0.00 0.00 0.00 3.85
329 333 1.007721 TGAAGGAGGAGAAGGGAGGAG 59.992 57.143 0.00 0.00 0.00 3.69
330 334 1.093408 TGAAGGAGGAGAAGGGAGGA 58.907 55.000 0.00 0.00 0.00 3.71
331 335 2.188818 ATGAAGGAGGAGAAGGGAGG 57.811 55.000 0.00 0.00 0.00 4.30
345 349 1.269831 GCTCCTACGGCACCTATGAAG 60.270 57.143 0.00 0.00 0.00 3.02
346 350 0.750850 GCTCCTACGGCACCTATGAA 59.249 55.000 0.00 0.00 0.00 2.57
347 351 0.106167 AGCTCCTACGGCACCTATGA 60.106 55.000 0.00 0.00 0.00 2.15
348 352 0.315568 GAGCTCCTACGGCACCTATG 59.684 60.000 0.87 0.00 0.00 2.23
349 353 0.828343 GGAGCTCCTACGGCACCTAT 60.828 60.000 26.25 0.00 37.44 2.57
350 354 1.455217 GGAGCTCCTACGGCACCTA 60.455 63.158 26.25 0.00 37.44 3.08
351 355 2.760385 GGAGCTCCTACGGCACCT 60.760 66.667 26.25 0.00 37.44 4.00
352 356 4.208686 CGGAGCTCCTACGGCACC 62.209 72.222 29.73 1.36 33.64 5.01
357 361 3.584052 CCGTCCGGAGCTCCTACG 61.584 72.222 33.76 33.76 40.48 3.51
358 362 3.902086 GCCGTCCGGAGCTCCTAC 61.902 72.222 29.73 24.25 37.50 3.18
367 371 4.657824 AAGTGTGACGCCGTCCGG 62.658 66.667 15.60 0.24 42.52 5.14
368 372 3.403057 CAAGTGTGACGCCGTCCG 61.403 66.667 15.60 0.00 44.21 4.79
369 373 2.022129 CTCAAGTGTGACGCCGTCC 61.022 63.158 15.60 6.78 0.00 4.79
370 374 2.022129 CCTCAAGTGTGACGCCGTC 61.022 63.158 10.96 10.96 0.00 4.79
371 375 2.029073 CCTCAAGTGTGACGCCGT 59.971 61.111 0.00 0.00 0.00 5.68
372 376 2.738521 CCCTCAAGTGTGACGCCG 60.739 66.667 0.00 0.00 0.00 6.46
373 377 2.358737 CCCCTCAAGTGTGACGCC 60.359 66.667 0.00 0.00 0.00 5.68
374 378 3.050275 GCCCCTCAAGTGTGACGC 61.050 66.667 0.00 0.00 0.00 5.19
375 379 2.738521 CGCCCCTCAAGTGTGACG 60.739 66.667 0.00 0.00 0.00 4.35
376 380 3.050275 GCGCCCCTCAAGTGTGAC 61.050 66.667 0.00 0.00 0.00 3.67
377 381 4.680237 CGCGCCCCTCAAGTGTGA 62.680 66.667 0.00 0.00 0.00 3.58
378 382 4.680237 TCGCGCCCCTCAAGTGTG 62.680 66.667 0.00 0.00 0.00 3.82
379 383 4.379243 CTCGCGCCCCTCAAGTGT 62.379 66.667 0.00 0.00 0.00 3.55
418 422 2.585247 GATTCCTTCCCGACGCCG 60.585 66.667 0.00 0.00 0.00 6.46
419 423 2.203029 GGATTCCTTCCCGACGCC 60.203 66.667 0.00 0.00 38.75 5.68
420 424 1.521681 CTGGATTCCTTCCCGACGC 60.522 63.158 3.95 0.00 44.77 5.19
421 425 1.144057 CCTGGATTCCTTCCCGACG 59.856 63.158 3.95 0.00 44.77 5.12
422 426 1.153147 GCCTGGATTCCTTCCCGAC 60.153 63.158 3.95 0.00 44.77 4.79
423 427 1.615124 TGCCTGGATTCCTTCCCGA 60.615 57.895 3.95 0.00 44.77 5.14
424 428 1.153086 CTGCCTGGATTCCTTCCCG 60.153 63.158 3.95 0.00 44.77 5.14
425 429 1.454663 GCTGCCTGGATTCCTTCCC 60.455 63.158 3.95 0.00 44.77 3.97
426 430 1.821332 CGCTGCCTGGATTCCTTCC 60.821 63.158 3.95 0.00 45.69 3.46
427 431 1.821332 CCGCTGCCTGGATTCCTTC 60.821 63.158 3.95 0.00 0.00 3.46
428 432 2.262774 CTCCGCTGCCTGGATTCCTT 62.263 60.000 3.95 0.00 34.32 3.36
429 433 2.688666 TCCGCTGCCTGGATTCCT 60.689 61.111 3.95 0.00 0.00 3.36
430 434 2.203126 CTCCGCTGCCTGGATTCC 60.203 66.667 0.00 0.00 34.32 3.01
431 435 2.899339 GCTCCGCTGCCTGGATTC 60.899 66.667 0.00 0.00 34.32 2.52
432 436 3.397613 GAGCTCCGCTGCCTGGATT 62.398 63.158 0.87 0.00 39.88 3.01
433 437 3.859414 GAGCTCCGCTGCCTGGAT 61.859 66.667 0.87 0.00 39.88 3.41
438 442 4.479993 ATGTGGAGCTCCGCTGCC 62.480 66.667 38.64 19.95 46.33 4.85
440 444 1.078918 TTCATGTGGAGCTCCGCTG 60.079 57.895 38.64 32.02 46.36 5.18
441 445 1.220206 CTTCATGTGGAGCTCCGCT 59.780 57.895 38.64 24.96 46.36 5.52
442 446 0.391661 TTCTTCATGTGGAGCTCCGC 60.392 55.000 34.82 34.82 46.40 5.54
443 447 1.066573 ACTTCTTCATGTGGAGCTCCG 60.067 52.381 27.43 13.45 39.43 4.63
444 448 2.354259 CACTTCTTCATGTGGAGCTCC 58.646 52.381 26.78 26.78 0.00 4.70
451 455 1.442769 CCGTCCCACTTCTTCATGTG 58.557 55.000 0.00 0.00 0.00 3.21
452 456 0.324943 CCCGTCCCACTTCTTCATGT 59.675 55.000 0.00 0.00 0.00 3.21
453 457 0.324943 ACCCGTCCCACTTCTTCATG 59.675 55.000 0.00 0.00 0.00 3.07
454 458 0.324943 CACCCGTCCCACTTCTTCAT 59.675 55.000 0.00 0.00 0.00 2.57
455 459 1.752198 CACCCGTCCCACTTCTTCA 59.248 57.895 0.00 0.00 0.00 3.02
456 460 1.003718 CCACCCGTCCCACTTCTTC 60.004 63.158 0.00 0.00 0.00 2.87
457 461 0.840722 ATCCACCCGTCCCACTTCTT 60.841 55.000 0.00 0.00 0.00 2.52
458 462 1.229529 ATCCACCCGTCCCACTTCT 60.230 57.895 0.00 0.00 0.00 2.85
459 463 1.221021 GATCCACCCGTCCCACTTC 59.779 63.158 0.00 0.00 0.00 3.01
460 464 2.298661 GGATCCACCCGTCCCACTT 61.299 63.158 6.95 0.00 0.00 3.16
461 465 2.687566 GGATCCACCCGTCCCACT 60.688 66.667 6.95 0.00 0.00 4.00
462 466 4.157120 CGGATCCACCCGTCCCAC 62.157 72.222 13.41 0.00 44.23 4.61
470 474 2.901051 CTACGTGTGCCGGATCCACC 62.901 65.000 13.41 1.81 42.24 4.61
471 475 1.518572 CTACGTGTGCCGGATCCAC 60.519 63.158 13.41 4.34 42.24 4.02
472 476 2.889617 CTACGTGTGCCGGATCCA 59.110 61.111 13.41 0.00 42.24 3.41
473 477 2.585247 GCTACGTGTGCCGGATCC 60.585 66.667 5.05 0.00 42.24 3.36
474 478 1.878522 CAGCTACGTGTGCCGGATC 60.879 63.158 5.05 0.00 42.24 3.36
475 479 2.184322 CAGCTACGTGTGCCGGAT 59.816 61.111 5.05 0.00 42.24 4.18
476 480 4.735132 GCAGCTACGTGTGCCGGA 62.735 66.667 5.05 0.00 42.24 5.14
477 481 4.742201 AGCAGCTACGTGTGCCGG 62.742 66.667 13.78 0.00 40.81 6.13
478 482 3.181967 GAGCAGCTACGTGTGCCG 61.182 66.667 13.78 5.27 40.81 5.69
479 483 3.181967 CGAGCAGCTACGTGTGCC 61.182 66.667 13.78 6.72 40.81 5.01
480 484 2.890847 ATCCGAGCAGCTACGTGTGC 62.891 60.000 10.45 10.45 40.17 4.57
481 485 0.867753 GATCCGAGCAGCTACGTGTG 60.868 60.000 0.00 0.00 0.00 3.82
482 486 1.433879 GATCCGAGCAGCTACGTGT 59.566 57.895 0.00 0.00 0.00 4.49
483 487 1.299468 GGATCCGAGCAGCTACGTG 60.299 63.158 0.00 0.00 0.00 4.49
484 488 2.835705 CGGATCCGAGCAGCTACGT 61.836 63.158 30.62 0.00 42.83 3.57
485 489 2.050895 CGGATCCGAGCAGCTACG 60.051 66.667 30.62 0.64 42.83 3.51
486 490 1.008309 GACGGATCCGAGCAGCTAC 60.008 63.158 39.55 15.23 42.83 3.58
487 491 2.194212 GGACGGATCCGAGCAGCTA 61.194 63.158 39.55 0.00 42.83 3.32
488 492 3.532155 GGACGGATCCGAGCAGCT 61.532 66.667 39.55 17.21 42.83 4.24
496 500 2.746803 CGCAAAACCGGACGGATCC 61.747 63.158 18.80 0.00 42.28 3.36
497 501 2.782615 CGCAAAACCGGACGGATC 59.217 61.111 18.80 0.70 38.96 3.36
498 502 3.428282 GCGCAAAACCGGACGGAT 61.428 61.111 18.80 1.95 38.96 4.18
499 503 4.912485 TGCGCAAAACCGGACGGA 62.912 61.111 18.80 1.61 38.96 4.69
500 504 4.676586 GTGCGCAAAACCGGACGG 62.677 66.667 14.00 9.56 39.61 4.79
506 510 4.307908 AGTCGCGTGCGCAAAACC 62.308 61.111 14.00 0.00 42.06 3.27
507 511 3.085010 CAGTCGCGTGCGCAAAAC 61.085 61.111 14.00 8.21 42.06 2.43
508 512 4.954680 GCAGTCGCGTGCGCAAAA 62.955 61.111 14.00 0.00 42.06 2.44
519 523 3.726517 CAGCCCCAAACGCAGTCG 61.727 66.667 0.00 0.00 45.00 4.18
520 524 2.130073 GAACAGCCCCAAACGCAGTC 62.130 60.000 0.00 0.00 45.00 3.51
522 526 2.644992 GAACAGCCCCAAACGCAG 59.355 61.111 0.00 0.00 0.00 5.18
523 527 3.283684 CGAACAGCCCCAAACGCA 61.284 61.111 0.00 0.00 0.00 5.24
524 528 4.038080 CCGAACAGCCCCAAACGC 62.038 66.667 0.00 0.00 0.00 4.84
525 529 1.674322 ATCCGAACAGCCCCAAACG 60.674 57.895 0.00 0.00 0.00 3.60
526 530 1.595093 CCATCCGAACAGCCCCAAAC 61.595 60.000 0.00 0.00 0.00 2.93
527 531 1.304052 CCATCCGAACAGCCCCAAA 60.304 57.895 0.00 0.00 0.00 3.28
528 532 1.570857 ATCCATCCGAACAGCCCCAA 61.571 55.000 0.00 0.00 0.00 4.12
529 533 1.570857 AATCCATCCGAACAGCCCCA 61.571 55.000 0.00 0.00 0.00 4.96
530 534 0.819666 GAATCCATCCGAACAGCCCC 60.820 60.000 0.00 0.00 0.00 5.80
531 535 1.160329 CGAATCCATCCGAACAGCCC 61.160 60.000 0.00 0.00 0.00 5.19
532 536 1.160329 CCGAATCCATCCGAACAGCC 61.160 60.000 0.00 0.00 0.00 4.85
533 537 0.179084 TCCGAATCCATCCGAACAGC 60.179 55.000 0.00 0.00 0.00 4.40
534 538 1.539065 CCTCCGAATCCATCCGAACAG 60.539 57.143 0.00 0.00 0.00 3.16
535 539 0.464036 CCTCCGAATCCATCCGAACA 59.536 55.000 0.00 0.00 0.00 3.18
536 540 0.464452 ACCTCCGAATCCATCCGAAC 59.536 55.000 0.00 0.00 0.00 3.95
537 541 0.464036 CACCTCCGAATCCATCCGAA 59.536 55.000 0.00 0.00 0.00 4.30
538 542 1.399744 CCACCTCCGAATCCATCCGA 61.400 60.000 0.00 0.00 0.00 4.55
539 543 1.069765 CCACCTCCGAATCCATCCG 59.930 63.158 0.00 0.00 0.00 4.18
540 544 1.059913 ATCCACCTCCGAATCCATCC 58.940 55.000 0.00 0.00 0.00 3.51
541 545 2.938956 AATCCACCTCCGAATCCATC 57.061 50.000 0.00 0.00 0.00 3.51
542 546 2.485479 CGAAATCCACCTCCGAATCCAT 60.485 50.000 0.00 0.00 0.00 3.41
543 547 1.134521 CGAAATCCACCTCCGAATCCA 60.135 52.381 0.00 0.00 0.00 3.41
544 548 1.134491 ACGAAATCCACCTCCGAATCC 60.134 52.381 0.00 0.00 0.00 3.01
545 549 1.933853 CACGAAATCCACCTCCGAATC 59.066 52.381 0.00 0.00 0.00 2.52
546 550 1.406887 CCACGAAATCCACCTCCGAAT 60.407 52.381 0.00 0.00 0.00 3.34
547 551 0.036765 CCACGAAATCCACCTCCGAA 60.037 55.000 0.00 0.00 0.00 4.30
548 552 0.901114 TCCACGAAATCCACCTCCGA 60.901 55.000 0.00 0.00 0.00 4.55
549 553 0.460284 CTCCACGAAATCCACCTCCG 60.460 60.000 0.00 0.00 0.00 4.63
550 554 0.107654 CCTCCACGAAATCCACCTCC 60.108 60.000 0.00 0.00 0.00 4.30
551 555 0.107654 CCCTCCACGAAATCCACCTC 60.108 60.000 0.00 0.00 0.00 3.85
552 556 0.840722 ACCCTCCACGAAATCCACCT 60.841 55.000 0.00 0.00 0.00 4.00
553 557 0.676782 CACCCTCCACGAAATCCACC 60.677 60.000 0.00 0.00 0.00 4.61
554 558 0.676782 CCACCCTCCACGAAATCCAC 60.677 60.000 0.00 0.00 0.00 4.02
555 559 1.682849 CCACCCTCCACGAAATCCA 59.317 57.895 0.00 0.00 0.00 3.41
556 560 1.077716 CCCACCCTCCACGAAATCC 60.078 63.158 0.00 0.00 0.00 3.01
557 561 0.546598 ATCCCACCCTCCACGAAATC 59.453 55.000 0.00 0.00 0.00 2.17
558 562 0.546598 GATCCCACCCTCCACGAAAT 59.453 55.000 0.00 0.00 0.00 2.17
559 563 0.546747 AGATCCCACCCTCCACGAAA 60.547 55.000 0.00 0.00 0.00 3.46
560 564 0.337082 TAGATCCCACCCTCCACGAA 59.663 55.000 0.00 0.00 0.00 3.85
561 565 0.106167 CTAGATCCCACCCTCCACGA 60.106 60.000 0.00 0.00 0.00 4.35
562 566 1.115930 CCTAGATCCCACCCTCCACG 61.116 65.000 0.00 0.00 0.00 4.94
563 567 0.764752 CCCTAGATCCCACCCTCCAC 60.765 65.000 0.00 0.00 0.00 4.02
564 568 0.934302 TCCCTAGATCCCACCCTCCA 60.934 60.000 0.00 0.00 0.00 3.86
565 569 0.178918 CTCCCTAGATCCCACCCTCC 60.179 65.000 0.00 0.00 0.00 4.30
566 570 0.861155 TCTCCCTAGATCCCACCCTC 59.139 60.000 0.00 0.00 0.00 4.30
567 571 0.863956 CTCTCCCTAGATCCCACCCT 59.136 60.000 0.00 0.00 0.00 4.34
568 572 0.834261 GCTCTCCCTAGATCCCACCC 60.834 65.000 0.00 0.00 0.00 4.61
569 573 1.182385 CGCTCTCCCTAGATCCCACC 61.182 65.000 0.00 0.00 0.00 4.61
570 574 1.182385 CCGCTCTCCCTAGATCCCAC 61.182 65.000 0.00 0.00 0.00 4.61
571 575 1.153989 CCGCTCTCCCTAGATCCCA 59.846 63.158 0.00 0.00 0.00 4.37
572 576 2.279810 GCCGCTCTCCCTAGATCCC 61.280 68.421 0.00 0.00 0.00 3.85
573 577 2.631580 CGCCGCTCTCCCTAGATCC 61.632 68.421 0.00 0.00 0.00 3.36
574 578 2.631580 CCGCCGCTCTCCCTAGATC 61.632 68.421 0.00 0.00 0.00 2.75
575 579 2.598985 CCGCCGCTCTCCCTAGAT 60.599 66.667 0.00 0.00 0.00 1.98
595 599 3.717294 ATCCCCGCACCACTCCAC 61.717 66.667 0.00 0.00 0.00 4.02
596 600 3.716195 CATCCCCGCACCACTCCA 61.716 66.667 0.00 0.00 0.00 3.86
598 602 3.918253 TTGCATCCCCGCACCACTC 62.918 63.158 0.00 0.00 42.87 3.51
599 603 2.992817 TTTTGCATCCCCGCACCACT 62.993 55.000 0.00 0.00 42.87 4.00
600 604 2.093537 TTTTTGCATCCCCGCACCAC 62.094 55.000 0.00 0.00 42.87 4.16
601 605 1.814772 CTTTTTGCATCCCCGCACCA 61.815 55.000 0.00 0.00 42.87 4.17
602 606 1.079888 CTTTTTGCATCCCCGCACC 60.080 57.895 0.00 0.00 42.87 5.01
603 607 1.079888 CCTTTTTGCATCCCCGCAC 60.080 57.895 0.00 0.00 42.87 5.34
604 608 1.228706 TCCTTTTTGCATCCCCGCA 60.229 52.632 0.00 0.00 41.03 5.69
605 609 1.215382 GTCCTTTTTGCATCCCCGC 59.785 57.895 0.00 0.00 0.00 6.13
606 610 0.958382 TCGTCCTTTTTGCATCCCCG 60.958 55.000 0.00 0.00 0.00 5.73
607 611 0.811281 CTCGTCCTTTTTGCATCCCC 59.189 55.000 0.00 0.00 0.00 4.81
608 612 1.740025 CTCTCGTCCTTTTTGCATCCC 59.260 52.381 0.00 0.00 0.00 3.85
609 613 1.740025 CCTCTCGTCCTTTTTGCATCC 59.260 52.381 0.00 0.00 0.00 3.51
610 614 1.740025 CCCTCTCGTCCTTTTTGCATC 59.260 52.381 0.00 0.00 0.00 3.91
611 615 1.351017 TCCCTCTCGTCCTTTTTGCAT 59.649 47.619 0.00 0.00 0.00 3.96
612 616 0.762418 TCCCTCTCGTCCTTTTTGCA 59.238 50.000 0.00 0.00 0.00 4.08
613 617 1.157585 GTCCCTCTCGTCCTTTTTGC 58.842 55.000 0.00 0.00 0.00 3.68
614 618 2.037251 TCTGTCCCTCTCGTCCTTTTTG 59.963 50.000 0.00 0.00 0.00 2.44
615 619 2.326428 TCTGTCCCTCTCGTCCTTTTT 58.674 47.619 0.00 0.00 0.00 1.94
616 620 2.011122 TCTGTCCCTCTCGTCCTTTT 57.989 50.000 0.00 0.00 0.00 2.27
617 621 2.239681 ATCTGTCCCTCTCGTCCTTT 57.760 50.000 0.00 0.00 0.00 3.11
618 622 2.657143 GTATCTGTCCCTCTCGTCCTT 58.343 52.381 0.00 0.00 0.00 3.36
619 623 1.475392 CGTATCTGTCCCTCTCGTCCT 60.475 57.143 0.00 0.00 0.00 3.85
620 624 0.945813 CGTATCTGTCCCTCTCGTCC 59.054 60.000 0.00 0.00 0.00 4.79
621 625 1.950828 TCGTATCTGTCCCTCTCGTC 58.049 55.000 0.00 0.00 0.00 4.20
622 626 2.015587 GTTCGTATCTGTCCCTCTCGT 58.984 52.381 0.00 0.00 0.00 4.18
623 627 1.334243 GGTTCGTATCTGTCCCTCTCG 59.666 57.143 0.00 0.00 0.00 4.04
624 628 1.682323 GGGTTCGTATCTGTCCCTCTC 59.318 57.143 0.00 0.00 35.63 3.20
625 629 1.777941 GGGTTCGTATCTGTCCCTCT 58.222 55.000 0.00 0.00 35.63 3.69
626 630 0.384669 CGGGTTCGTATCTGTCCCTC 59.615 60.000 0.00 0.00 36.30 4.30
627 631 0.033796 TCGGGTTCGTATCTGTCCCT 60.034 55.000 0.00 0.00 36.30 4.20
628 632 0.101939 GTCGGGTTCGTATCTGTCCC 59.898 60.000 0.00 0.00 37.69 4.46
629 633 0.813184 TGTCGGGTTCGTATCTGTCC 59.187 55.000 0.00 0.00 37.69 4.02
630 634 2.642139 TTGTCGGGTTCGTATCTGTC 57.358 50.000 0.00 0.00 37.69 3.51
631 635 3.389925 TTTTGTCGGGTTCGTATCTGT 57.610 42.857 0.00 0.00 37.69 3.41
649 653 2.622064 ACGAGAGTCAGGTGCTTTTT 57.378 45.000 0.00 0.00 44.19 1.94
672 676 2.978452 CTTCCCTGCGCATCCTACGG 62.978 65.000 12.24 7.45 0.00 4.02
673 677 1.592669 CTTCCCTGCGCATCCTACG 60.593 63.158 12.24 0.00 0.00 3.51
674 678 1.227674 CCTTCCCTGCGCATCCTAC 60.228 63.158 12.24 0.00 0.00 3.18
675 679 1.382557 TCCTTCCCTGCGCATCCTA 60.383 57.895 12.24 0.00 0.00 2.94
676 680 2.688666 TCCTTCCCTGCGCATCCT 60.689 61.111 12.24 0.00 0.00 3.24
677 681 2.203126 CTCCTTCCCTGCGCATCC 60.203 66.667 12.24 0.00 0.00 3.51
678 682 1.817099 CACTCCTTCCCTGCGCATC 60.817 63.158 12.24 0.00 0.00 3.91
679 683 2.270205 CACTCCTTCCCTGCGCAT 59.730 61.111 12.24 0.00 0.00 4.73
680 684 4.020617 CCACTCCTTCCCTGCGCA 62.021 66.667 10.98 10.98 0.00 6.09
681 685 3.959991 GACCACTCCTTCCCTGCGC 62.960 68.421 0.00 0.00 0.00 6.09
682 686 2.266055 GACCACTCCTTCCCTGCG 59.734 66.667 0.00 0.00 0.00 5.18
683 687 2.232298 CTCGACCACTCCTTCCCTGC 62.232 65.000 0.00 0.00 0.00 4.85
684 688 1.608717 CCTCGACCACTCCTTCCCTG 61.609 65.000 0.00 0.00 0.00 4.45
685 689 1.305381 CCTCGACCACTCCTTCCCT 60.305 63.158 0.00 0.00 0.00 4.20
686 690 3.020237 GCCTCGACCACTCCTTCCC 62.020 68.421 0.00 0.00 0.00 3.97
687 691 2.579738 GCCTCGACCACTCCTTCC 59.420 66.667 0.00 0.00 0.00 3.46
688 692 2.182030 CGCCTCGACCACTCCTTC 59.818 66.667 0.00 0.00 0.00 3.46
689 693 4.070552 GCGCCTCGACCACTCCTT 62.071 66.667 0.00 0.00 0.00 3.36
707 711 2.824071 TTTAGTCGAACCGAGCGGCC 62.824 60.000 9.14 0.00 36.23 6.13
708 712 0.804933 ATTTAGTCGAACCGAGCGGC 60.805 55.000 9.14 0.00 36.23 6.53
709 713 2.223433 ACTATTTAGTCGAACCGAGCGG 60.223 50.000 7.48 7.48 36.23 5.52
710 714 2.782192 CACTATTTAGTCGAACCGAGCG 59.218 50.000 0.00 0.00 36.23 5.03
711 715 2.534757 GCACTATTTAGTCGAACCGAGC 59.465 50.000 0.00 0.00 36.23 5.03
712 716 2.782192 CGCACTATTTAGTCGAACCGAG 59.218 50.000 0.00 0.00 36.23 4.63
713 717 2.789208 CGCACTATTTAGTCGAACCGA 58.211 47.619 0.00 0.00 33.46 4.69
714 718 1.254570 GCGCACTATTTAGTCGAACCG 59.745 52.381 0.30 0.00 33.46 4.44
715 719 1.254570 CGCGCACTATTTAGTCGAACC 59.745 52.381 8.75 0.00 33.46 3.62
716 720 1.916000 ACGCGCACTATTTAGTCGAAC 59.084 47.619 5.73 0.00 33.46 3.95
717 721 1.915350 CACGCGCACTATTTAGTCGAA 59.085 47.619 5.73 0.00 33.46 3.71
718 722 1.541475 CACGCGCACTATTTAGTCGA 58.459 50.000 5.73 0.00 33.46 4.20
719 723 0.044161 GCACGCGCACTATTTAGTCG 60.044 55.000 5.73 5.69 38.36 4.18
720 724 0.996462 TGCACGCGCACTATTTAGTC 59.004 50.000 5.73 0.00 45.36 2.59
721 725 3.131326 TGCACGCGCACTATTTAGT 57.869 47.368 5.73 0.00 45.36 2.24
731 735 1.963747 AATCTTAAAAGTGCACGCGC 58.036 45.000 12.01 0.00 39.24 6.86
732 736 4.553429 CCTAAAATCTTAAAAGTGCACGCG 59.447 41.667 12.01 3.53 0.00 6.01
733 737 5.695818 TCCTAAAATCTTAAAAGTGCACGC 58.304 37.500 12.01 0.00 0.00 5.34
734 738 8.568732 TTTTCCTAAAATCTTAAAAGTGCACG 57.431 30.769 12.01 0.00 0.00 5.34
758 762 6.038825 TCGGACGTATTGGCATGAATATTTTT 59.961 34.615 0.00 0.00 0.00 1.94
759 763 5.529430 TCGGACGTATTGGCATGAATATTTT 59.471 36.000 0.00 0.00 0.00 1.82
760 764 5.060506 TCGGACGTATTGGCATGAATATTT 58.939 37.500 0.00 0.00 0.00 1.40
761 765 4.637276 TCGGACGTATTGGCATGAATATT 58.363 39.130 0.00 0.00 0.00 1.28
762 766 4.265904 TCGGACGTATTGGCATGAATAT 57.734 40.909 0.00 0.00 0.00 1.28
763 767 3.737032 TCGGACGTATTGGCATGAATA 57.263 42.857 0.00 0.00 0.00 1.75
764 768 2.613026 TCGGACGTATTGGCATGAAT 57.387 45.000 0.00 0.00 0.00 2.57
765 769 2.388310 TTCGGACGTATTGGCATGAA 57.612 45.000 0.00 0.00 0.00 2.57
766 770 2.276201 CTTTCGGACGTATTGGCATGA 58.724 47.619 0.00 0.00 0.00 3.07
767 771 1.268032 GCTTTCGGACGTATTGGCATG 60.268 52.381 0.00 0.00 0.00 4.06
768 772 1.014352 GCTTTCGGACGTATTGGCAT 58.986 50.000 0.00 0.00 0.00 4.40
769 773 0.320858 TGCTTTCGGACGTATTGGCA 60.321 50.000 0.00 0.00 0.00 4.92
770 774 0.373716 CTGCTTTCGGACGTATTGGC 59.626 55.000 0.00 0.00 0.00 4.52
771 775 1.006832 CCTGCTTTCGGACGTATTGG 58.993 55.000 0.00 0.00 0.00 3.16
772 776 1.927174 CTCCTGCTTTCGGACGTATTG 59.073 52.381 0.00 0.00 0.00 1.90
773 777 1.822990 TCTCCTGCTTTCGGACGTATT 59.177 47.619 0.00 0.00 0.00 1.89
774 778 1.471119 TCTCCTGCTTTCGGACGTAT 58.529 50.000 0.00 0.00 0.00 3.06
775 779 1.471119 ATCTCCTGCTTTCGGACGTA 58.529 50.000 0.00 0.00 0.00 3.57
776 780 0.608640 AATCTCCTGCTTTCGGACGT 59.391 50.000 0.00 0.00 0.00 4.34
777 781 1.661112 GAAATCTCCTGCTTTCGGACG 59.339 52.381 0.00 0.00 0.00 4.79
778 782 1.661112 CGAAATCTCCTGCTTTCGGAC 59.339 52.381 8.03 0.00 46.04 4.79
779 783 2.010145 CGAAATCTCCTGCTTTCGGA 57.990 50.000 8.03 0.00 46.04 4.55
782 786 3.369451 GTGTCTCGAAATCTCCTGCTTTC 59.631 47.826 0.00 0.00 0.00 2.62
783 787 3.244215 TGTGTCTCGAAATCTCCTGCTTT 60.244 43.478 0.00 0.00 0.00 3.51
784 788 2.300152 TGTGTCTCGAAATCTCCTGCTT 59.700 45.455 0.00 0.00 0.00 3.91
785 789 1.895798 TGTGTCTCGAAATCTCCTGCT 59.104 47.619 0.00 0.00 0.00 4.24
786 790 2.266554 CTGTGTCTCGAAATCTCCTGC 58.733 52.381 0.00 0.00 0.00 4.85
787 791 2.886081 CCTGTGTCTCGAAATCTCCTG 58.114 52.381 0.00 0.00 0.00 3.86
788 792 1.205893 GCCTGTGTCTCGAAATCTCCT 59.794 52.381 0.00 0.00 0.00 3.69
789 793 1.066858 TGCCTGTGTCTCGAAATCTCC 60.067 52.381 0.00 0.00 0.00 3.71
790 794 1.996191 GTGCCTGTGTCTCGAAATCTC 59.004 52.381 0.00 0.00 0.00 2.75
791 795 1.344438 TGTGCCTGTGTCTCGAAATCT 59.656 47.619 0.00 0.00 0.00 2.40
792 796 1.461127 GTGTGCCTGTGTCTCGAAATC 59.539 52.381 0.00 0.00 0.00 2.17
793 797 1.202639 TGTGTGCCTGTGTCTCGAAAT 60.203 47.619 0.00 0.00 0.00 2.17
794 798 0.176910 TGTGTGCCTGTGTCTCGAAA 59.823 50.000 0.00 0.00 0.00 3.46
795 799 0.249447 CTGTGTGCCTGTGTCTCGAA 60.249 55.000 0.00 0.00 0.00 3.71
796 800 1.363807 CTGTGTGCCTGTGTCTCGA 59.636 57.895 0.00 0.00 0.00 4.04
797 801 2.313172 GCTGTGTGCCTGTGTCTCG 61.313 63.158 0.00 0.00 35.15 4.04
798 802 1.226686 CTGCTGTGTGCCTGTGTCTC 61.227 60.000 0.00 0.00 42.00 3.36
805 809 1.483595 TAGGAAGCTGCTGTGTGCCT 61.484 55.000 1.35 8.08 42.00 4.75
832 836 4.207019 CGAACCAAAGAAAAACTGTGATGC 59.793 41.667 0.00 0.00 35.98 3.91
835 839 6.238538 GGATACGAACCAAAGAAAAACTGTGA 60.239 38.462 0.00 0.00 35.98 3.58
836 840 5.912955 GGATACGAACCAAAGAAAAACTGTG 59.087 40.000 0.00 0.00 33.84 3.66
874 878 1.010419 CCAAGTTTACGTCGGTCGGG 61.010 60.000 0.00 0.00 44.69 5.14
1169 1191 0.249155 GTCGGCGTTCGGGAATATGA 60.249 55.000 6.85 0.00 39.77 2.15
1258 1280 2.971598 CGTCCTTGGCCAGATGGGT 61.972 63.158 17.73 0.00 39.65 4.51
1384 1481 2.745308 CCCCCAGCATCCATGTCGA 61.745 63.158 0.00 0.00 0.00 4.20
1389 1486 0.995132 TGATCACCCCCAGCATCCAT 60.995 55.000 0.00 0.00 0.00 3.41
1446 1543 3.315142 TAGCCTTGCCAGCTCCGTG 62.315 63.158 0.00 0.00 41.83 4.94
1806 1936 9.531942 TTACAATCGTTTTACAAGAGAGTTGTA 57.468 29.630 0.00 0.00 34.11 2.41
1807 1937 6.920569 ACAATCGTTTTACAAGAGAGTTGT 57.079 33.333 0.00 0.00 36.49 3.32
1808 1938 9.878599 ATTTACAATCGTTTTACAAGAGAGTTG 57.121 29.630 0.00 0.00 0.00 3.16
1810 1940 8.718734 GGATTTACAATCGTTTTACAAGAGAGT 58.281 33.333 0.00 0.00 0.00 3.24
1853 1993 4.515191 GGCTGGAATCGAACTATTGCATTA 59.485 41.667 0.00 0.00 36.72 1.90
1874 2014 2.162208 TCAAACATCAAATCTGCTCGGC 59.838 45.455 0.00 0.00 0.00 5.54
1880 2020 7.478322 AGGAAATCGATCAAACATCAAATCTG 58.522 34.615 0.00 0.00 0.00 2.90
1899 2039 9.331282 CATCTTAGAACCGAAGAATTAGGAAAT 57.669 33.333 0.00 0.00 44.37 2.17
1907 2047 7.338710 TCAAATCCATCTTAGAACCGAAGAAT 58.661 34.615 0.00 0.00 36.54 2.40
1910 2050 6.455646 CGTTCAAATCCATCTTAGAACCGAAG 60.456 42.308 0.00 0.00 33.65 3.79
2004 2144 6.738114 ACTCATGTGTTTACAAAGGTTCATG 58.262 36.000 0.00 0.00 40.84 3.07
2005 2145 6.959639 ACTCATGTGTTTACAAAGGTTCAT 57.040 33.333 0.00 0.00 40.84 2.57
2027 2167 8.142994 TCTCACAACTCTTTTATTCTCACAAC 57.857 34.615 0.00 0.00 0.00 3.32
2090 2230 5.699097 TGGTTTTCTGCCAATACACTTAC 57.301 39.130 0.00 0.00 32.29 2.34
2091 2231 8.588290 AATATGGTTTTCTGCCAATACACTTA 57.412 30.769 0.00 0.00 39.72 2.24
2154 2296 4.678256 ACCAGACTTCCACTAAGATCTGA 58.322 43.478 0.00 0.00 41.23 3.27
2171 2313 8.370940 CCTCTTATAAATCAGCTTCATACCAGA 58.629 37.037 0.00 0.00 0.00 3.86
2318 2539 3.104512 ACCCATCAAGTCGTCTTATCCA 58.895 45.455 0.00 0.00 32.07 3.41
2388 2614 1.905843 CAACCAATTCCCACCCGCA 60.906 57.895 0.00 0.00 0.00 5.69
2394 2620 3.540314 GCATATTGCAACCAATTCCCA 57.460 42.857 0.00 0.00 44.26 4.37
2527 2766 8.862074 TCATTAAAACATGCATTGAAAAGATCG 58.138 29.630 0.00 0.00 0.00 3.69
2537 2776 7.147863 TGCTACCTCATCATTAAAACATGCATT 60.148 33.333 0.00 0.00 0.00 3.56
2581 2820 1.621814 GCGGGCCCTCACTAACATATA 59.378 52.381 22.43 0.00 0.00 0.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.