Multiple sequence alignment - TraesCS6B01G107000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G107000 chr6B 100.000 2201 0 0 1 2201 87540231 87542431 0.000000e+00 4065.0
1 TraesCS6B01G107000 chr6B 96.325 381 10 3 1369 1745 132149047 132149427 6.670000e-175 623.0
2 TraesCS6B01G107000 chr6B 86.070 201 25 2 1001 1201 66741872 66741675 1.710000e-51 213.0
3 TraesCS6B01G107000 chr6D 91.080 1379 90 16 1 1370 37442167 37443521 0.000000e+00 1834.0
4 TraesCS6B01G107000 chr6A 92.559 766 41 9 613 1370 48764190 48764947 0.000000e+00 1085.0
5 TraesCS6B01G107000 chr6A 88.313 830 64 12 556 1370 48712961 48713772 0.000000e+00 965.0
6 TraesCS6B01G107000 chr6A 92.131 610 43 4 1 609 48763482 48764087 0.000000e+00 856.0
7 TraesCS6B01G107000 chr6A 97.043 372 10 1 1369 1739 543392580 543392951 1.860000e-175 625.0
8 TraesCS6B01G107000 chr6A 95.052 384 13 5 1369 1749 614655513 614655133 1.120000e-167 599.0
9 TraesCS6B01G107000 chr6A 83.747 363 41 8 1755 2108 48764982 48765335 5.860000e-86 327.0
10 TraesCS6B01G107000 chr6A 85.714 315 30 7 1 301 48708549 48708862 3.530000e-83 318.0
11 TraesCS6B01G107000 chr6A 86.070 201 25 2 1001 1201 35929295 35929098 1.710000e-51 213.0
12 TraesCS6B01G107000 chr6A 90.625 96 9 0 482 577 48708960 48709055 6.380000e-26 128.0
13 TraesCS6B01G107000 chr2B 97.581 372 8 1 1369 1739 235161705 235161334 8.570000e-179 636.0
14 TraesCS6B01G107000 chr2B 97.319 373 8 2 1362 1733 264573428 264573799 1.110000e-177 632.0
15 TraesCS6B01G107000 chr2B 96.986 365 10 1 1369 1733 787092074 787092437 1.440000e-171 612.0
16 TraesCS6B01G107000 chr4B 97.527 364 9 0 1370 1733 530463865 530463502 6.670000e-175 623.0
17 TraesCS6B01G107000 chr3B 97.527 364 9 0 1370 1733 326247031 326247394 6.670000e-175 623.0
18 TraesCS6B01G107000 chr3B 96.774 372 11 1 1369 1739 109364990 109364619 8.630000e-174 619.0
19 TraesCS6B01G107000 chr3B 89.362 47 5 0 189 235 272181066 272181112 2.360000e-05 60.2
20 TraesCS6B01G107000 chrUn 86.567 201 24 2 1001 1201 100705664 100705861 3.680000e-53 219.0
21 TraesCS6B01G107000 chrUn 85.572 201 26 2 1001 1201 100575562 100575759 7.960000e-50 207.0
22 TraesCS6B01G107000 chr5D 85.185 81 10 2 189 268 478164185 478164264 5.040000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G107000 chr6B 87540231 87542431 2200 False 4065.000000 4065 100.000000 1 2201 1 chr6B.!!$F1 2200
1 TraesCS6B01G107000 chr6D 37442167 37443521 1354 False 1834.000000 1834 91.080000 1 1370 1 chr6D.!!$F1 1369
2 TraesCS6B01G107000 chr6A 48763482 48765335 1853 False 756.000000 1085 89.479000 1 2108 3 chr6A.!!$F3 2107
3 TraesCS6B01G107000 chr6A 48708549 48713772 5223 False 470.333333 965 88.217333 1 1370 3 chr6A.!!$F2 1369

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
162 177 0.393537 GAATGAGCCCCAGACACCAG 60.394 60.0 0.0 0.0 0.0 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1484 5624 0.185175 AAAGTTGAGGGTGGGGTGAC 59.815 55.0 0.0 0.0 0.0 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 2.124695 GAGGGGGTTGCTTAGCCG 60.125 66.667 0.29 0.00 45.75 5.52
86 87 4.621797 AACTATAGGGCCGATATAGGGT 57.378 45.455 25.83 16.30 37.48 4.34
87 88 4.621797 ACTATAGGGCCGATATAGGGTT 57.378 45.455 25.83 11.44 37.48 4.11
115 129 3.024547 TGTCGATGCTCTAAGCTAGGTT 58.975 45.455 12.54 12.54 42.97 3.50
119 133 4.888239 TCGATGCTCTAAGCTAGGTTAGTT 59.112 41.667 30.89 19.01 42.97 2.24
141 155 2.069465 TTTGTGTGCACGTGCCCATC 62.069 55.000 35.72 23.79 41.18 3.51
145 159 1.965930 GTGCACGTGCCCATCAGAA 60.966 57.895 35.72 13.53 41.18 3.02
162 177 0.393537 GAATGAGCCCCAGACACCAG 60.394 60.000 0.00 0.00 0.00 4.00
341 356 7.758528 AGTTTTATGTTGTGATCCGTACTACTC 59.241 37.037 0.00 0.00 0.00 2.59
363 378 6.820656 ACTCCAGCTCACTATTTACAATTCAG 59.179 38.462 0.00 0.00 0.00 3.02
365 380 7.394016 TCCAGCTCACTATTTACAATTCAGAA 58.606 34.615 0.00 0.00 0.00 3.02
522 2864 4.644300 TCGAATGCGTGTTGACCTACAAC 61.644 47.826 0.00 0.00 45.93 3.32
590 4605 4.952262 GCACTTCTATGCACAAATCTCA 57.048 40.909 0.00 0.00 45.39 3.27
593 4608 5.106396 GCACTTCTATGCACAAATCTCAACT 60.106 40.000 0.00 0.00 45.39 3.16
686 4808 5.333339 CGACTCCGTCAATAAATGCATTAGG 60.333 44.000 13.39 7.88 32.09 2.69
692 4814 6.144402 CCGTCAATAAATGCATTAGGAATTGC 59.856 38.462 13.39 13.48 0.00 3.56
711 4833 5.878332 TTGCCATCTTAAGTACACATGTG 57.122 39.130 24.25 24.25 0.00 3.21
719 4841 7.709269 TCTTAAGTACACATGTGAACTTGAC 57.291 36.000 31.94 17.20 0.00 3.18
763 4885 5.034852 TCCAATCAAGAACAAGACACTGA 57.965 39.130 0.00 0.00 0.00 3.41
863 4993 0.737219 GTCACCCTAGACGTACGCAT 59.263 55.000 16.72 6.62 0.00 4.73
884 5014 1.009829 CTGCCTCCGCTTACATCAAC 58.990 55.000 0.00 0.00 35.36 3.18
890 5020 4.051922 CCTCCGCTTACATCAACTACATC 58.948 47.826 0.00 0.00 0.00 3.06
923 5056 7.974482 AAATACCTTACAAGACCACTTACAC 57.026 36.000 0.00 0.00 34.70 2.90
924 5057 4.347360 ACCTTACAAGACCACTTACACC 57.653 45.455 0.00 0.00 34.70 4.16
925 5058 3.712733 ACCTTACAAGACCACTTACACCA 59.287 43.478 0.00 0.00 34.70 4.17
926 5059 4.202326 ACCTTACAAGACCACTTACACCAG 60.202 45.833 0.00 0.00 34.70 4.00
927 5060 2.256117 ACAAGACCACTTACACCAGC 57.744 50.000 0.00 0.00 34.70 4.85
928 5061 1.768870 ACAAGACCACTTACACCAGCT 59.231 47.619 0.00 0.00 34.70 4.24
929 5062 2.146342 CAAGACCACTTACACCAGCTG 58.854 52.381 6.78 6.78 34.70 4.24
1014 5147 1.925185 GAACTAATGGCGAAGTCGTCC 59.075 52.381 2.42 5.19 44.42 4.79
1247 5385 5.108187 ACTCCGGTATACTAGAGTTGTCA 57.892 43.478 17.39 0.00 36.16 3.58
1309 5448 0.813184 CCCTACTTTGTACCGCGAGA 59.187 55.000 8.23 0.00 0.00 4.04
1375 5515 7.598759 AATTGTAGTCGTTCATATAGAGGGT 57.401 36.000 0.00 0.00 0.00 4.34
1376 5516 6.387041 TTGTAGTCGTTCATATAGAGGGTG 57.613 41.667 0.00 0.00 0.00 4.61
1377 5517 5.443283 TGTAGTCGTTCATATAGAGGGTGT 58.557 41.667 0.00 0.00 0.00 4.16
1378 5518 5.889853 TGTAGTCGTTCATATAGAGGGTGTT 59.110 40.000 0.00 0.00 0.00 3.32
1379 5519 5.934402 AGTCGTTCATATAGAGGGTGTTT 57.066 39.130 0.00 0.00 0.00 2.83
1380 5520 5.661458 AGTCGTTCATATAGAGGGTGTTTG 58.339 41.667 0.00 0.00 0.00 2.93
1381 5521 4.809426 GTCGTTCATATAGAGGGTGTTTGG 59.191 45.833 0.00 0.00 0.00 3.28
1382 5522 4.712829 TCGTTCATATAGAGGGTGTTTGGA 59.287 41.667 0.00 0.00 0.00 3.53
1383 5523 5.365605 TCGTTCATATAGAGGGTGTTTGGAT 59.634 40.000 0.00 0.00 0.00 3.41
1384 5524 5.696724 CGTTCATATAGAGGGTGTTTGGATC 59.303 44.000 0.00 0.00 0.00 3.36
1385 5525 6.591935 GTTCATATAGAGGGTGTTTGGATCA 58.408 40.000 0.00 0.00 0.00 2.92
1386 5526 6.174720 TCATATAGAGGGTGTTTGGATCAC 57.825 41.667 0.00 0.00 35.36 3.06
1387 5527 5.905331 TCATATAGAGGGTGTTTGGATCACT 59.095 40.000 0.00 0.00 36.25 3.41
1388 5528 7.073208 TCATATAGAGGGTGTTTGGATCACTA 58.927 38.462 0.00 0.00 36.25 2.74
1389 5529 5.878406 ATAGAGGGTGTTTGGATCACTAG 57.122 43.478 0.00 0.00 36.25 2.57
1390 5530 3.791320 AGAGGGTGTTTGGATCACTAGA 58.209 45.455 0.00 0.00 36.25 2.43
1391 5531 3.772025 AGAGGGTGTTTGGATCACTAGAG 59.228 47.826 0.00 0.00 36.25 2.43
1392 5532 3.769844 GAGGGTGTTTGGATCACTAGAGA 59.230 47.826 0.00 0.00 36.25 3.10
1393 5533 3.515901 AGGGTGTTTGGATCACTAGAGAC 59.484 47.826 0.00 0.00 36.25 3.36
1394 5534 3.515901 GGGTGTTTGGATCACTAGAGACT 59.484 47.826 0.00 0.00 36.25 3.24
1395 5535 4.710375 GGGTGTTTGGATCACTAGAGACTA 59.290 45.833 0.00 0.00 36.25 2.59
1396 5536 5.163499 GGGTGTTTGGATCACTAGAGACTAG 60.163 48.000 0.00 0.00 36.25 2.57
1397 5537 5.652891 GGTGTTTGGATCACTAGAGACTAGA 59.347 44.000 11.94 0.00 36.25 2.43
1398 5538 6.183360 GGTGTTTGGATCACTAGAGACTAGAG 60.183 46.154 11.94 5.12 36.25 2.43
1399 5539 6.600032 GTGTTTGGATCACTAGAGACTAGAGA 59.400 42.308 11.94 9.84 33.59 3.10
1400 5540 6.600032 TGTTTGGATCACTAGAGACTAGAGAC 59.400 42.308 11.94 5.51 0.00 3.36
1401 5541 6.569127 TTGGATCACTAGAGACTAGAGACT 57.431 41.667 11.94 0.00 0.00 3.24
1402 5542 7.678207 TTGGATCACTAGAGACTAGAGACTA 57.322 40.000 11.94 0.00 0.00 2.59
1403 5543 7.297936 TGGATCACTAGAGACTAGAGACTAG 57.702 44.000 11.94 8.28 38.45 2.57
1404 5544 7.070629 TGGATCACTAGAGACTAGAGACTAGA 58.929 42.308 19.76 7.19 36.72 2.43
1405 5545 7.232737 TGGATCACTAGAGACTAGAGACTAGAG 59.767 44.444 19.76 14.96 36.72 2.43
1406 5546 7.450634 GGATCACTAGAGACTAGAGACTAGAGA 59.549 44.444 19.76 17.96 37.14 3.10
1407 5547 7.578310 TCACTAGAGACTAGAGACTAGAGAC 57.422 44.000 19.76 4.37 36.72 3.36
1408 5548 7.351952 TCACTAGAGACTAGAGACTAGAGACT 58.648 42.308 19.76 8.12 36.72 3.24
1409 5549 8.496916 TCACTAGAGACTAGAGACTAGAGACTA 58.503 40.741 19.76 9.86 36.72 2.59
1410 5550 8.784994 CACTAGAGACTAGAGACTAGAGACTAG 58.215 44.444 19.76 17.34 36.72 2.57
1411 5551 8.501070 ACTAGAGACTAGAGACTAGAGACTAGT 58.499 40.741 18.98 18.98 45.07 2.57
1413 5553 8.921353 AGAGACTAGAGACTAGAGACTAGTAG 57.079 42.308 18.95 7.78 43.31 2.57
1414 5554 8.501070 AGAGACTAGAGACTAGAGACTAGTAGT 58.499 40.741 18.95 1.37 43.31 2.73
1415 5555 9.784531 GAGACTAGAGACTAGAGACTAGTAGTA 57.215 40.741 18.95 3.86 43.31 1.82
1416 5556 9.790344 AGACTAGAGACTAGAGACTAGTAGTAG 57.210 40.741 18.95 2.87 43.31 2.57
1417 5557 9.566432 GACTAGAGACTAGAGACTAGTAGTAGT 57.434 40.741 10.09 10.09 43.31 2.73
1431 5571 7.688343 ACTAGTAGTAGTCACCTTTAGTCAGT 58.312 38.462 0.00 0.00 34.00 3.41
1432 5572 8.820831 ACTAGTAGTAGTCACCTTTAGTCAGTA 58.179 37.037 0.00 0.00 34.00 2.74
1433 5573 9.664332 CTAGTAGTAGTCACCTTTAGTCAGTAA 57.336 37.037 0.00 0.00 0.00 2.24
1434 5574 8.930846 AGTAGTAGTCACCTTTAGTCAGTAAA 57.069 34.615 0.00 0.00 0.00 2.01
1435 5575 8.791675 AGTAGTAGTCACCTTTAGTCAGTAAAC 58.208 37.037 0.00 0.00 0.00 2.01
1436 5576 6.990798 AGTAGTCACCTTTAGTCAGTAAACC 58.009 40.000 0.00 0.00 0.00 3.27
1437 5577 6.781507 AGTAGTCACCTTTAGTCAGTAAACCT 59.218 38.462 0.00 0.00 0.00 3.50
1438 5578 6.099159 AGTCACCTTTAGTCAGTAAACCTC 57.901 41.667 0.00 0.00 0.00 3.85
1439 5579 5.011840 AGTCACCTTTAGTCAGTAAACCTCC 59.988 44.000 0.00 0.00 0.00 4.30
1440 5580 4.903049 TCACCTTTAGTCAGTAAACCTCCA 59.097 41.667 0.00 0.00 0.00 3.86
1441 5581 5.367352 TCACCTTTAGTCAGTAAACCTCCAA 59.633 40.000 0.00 0.00 0.00 3.53
1442 5582 6.059484 CACCTTTAGTCAGTAAACCTCCAAA 58.941 40.000 0.00 0.00 0.00 3.28
1443 5583 6.017357 CACCTTTAGTCAGTAAACCTCCAAAC 60.017 42.308 0.00 0.00 0.00 2.93
1444 5584 6.059484 CCTTTAGTCAGTAAACCTCCAAACA 58.941 40.000 0.00 0.00 0.00 2.83
1445 5585 6.017357 CCTTTAGTCAGTAAACCTCCAAACAC 60.017 42.308 0.00 0.00 0.00 3.32
1446 5586 3.816994 AGTCAGTAAACCTCCAAACACC 58.183 45.455 0.00 0.00 0.00 4.16
1447 5587 2.882761 GTCAGTAAACCTCCAAACACCC 59.117 50.000 0.00 0.00 0.00 4.61
1448 5588 2.781174 TCAGTAAACCTCCAAACACCCT 59.219 45.455 0.00 0.00 0.00 4.34
1449 5589 3.203487 TCAGTAAACCTCCAAACACCCTT 59.797 43.478 0.00 0.00 0.00 3.95
1450 5590 3.317993 CAGTAAACCTCCAAACACCCTTG 59.682 47.826 0.00 0.00 0.00 3.61
1451 5591 2.838637 AAACCTCCAAACACCCTTGA 57.161 45.000 0.00 0.00 0.00 3.02
1452 5592 2.067365 AACCTCCAAACACCCTTGAC 57.933 50.000 0.00 0.00 0.00 3.18
1453 5593 1.222567 ACCTCCAAACACCCTTGACT 58.777 50.000 0.00 0.00 0.00 3.41
1454 5594 2.414612 ACCTCCAAACACCCTTGACTA 58.585 47.619 0.00 0.00 0.00 2.59
1455 5595 2.372172 ACCTCCAAACACCCTTGACTAG 59.628 50.000 0.00 0.00 0.00 2.57
1456 5596 2.372172 CCTCCAAACACCCTTGACTAGT 59.628 50.000 0.00 0.00 0.00 2.57
1457 5597 3.403038 CTCCAAACACCCTTGACTAGTG 58.597 50.000 0.00 0.00 37.53 2.74
1458 5598 2.105821 TCCAAACACCCTTGACTAGTGG 59.894 50.000 0.00 0.00 35.79 4.00
1459 5599 2.504367 CAAACACCCTTGACTAGTGGG 58.496 52.381 13.94 13.94 46.07 4.61
1464 5604 1.645710 CCCTTGACTAGTGGGTGACT 58.354 55.000 0.00 0.00 38.88 3.41
1465 5605 2.816411 CCCTTGACTAGTGGGTGACTA 58.184 52.381 0.00 0.00 35.96 2.59
1466 5606 3.170717 CCCTTGACTAGTGGGTGACTAA 58.829 50.000 0.00 0.00 36.69 2.24
1467 5607 3.581332 CCCTTGACTAGTGGGTGACTAAA 59.419 47.826 0.00 0.00 36.69 1.85
1468 5608 4.041198 CCCTTGACTAGTGGGTGACTAAAA 59.959 45.833 0.00 0.00 36.69 1.52
1469 5609 4.995487 CCTTGACTAGTGGGTGACTAAAAC 59.005 45.833 0.00 0.00 36.69 2.43
1470 5610 5.221661 CCTTGACTAGTGGGTGACTAAAACT 60.222 44.000 0.00 0.00 36.69 2.66
1471 5611 6.014840 CCTTGACTAGTGGGTGACTAAAACTA 60.015 42.308 0.00 0.00 36.69 2.24
1472 5612 6.585695 TGACTAGTGGGTGACTAAAACTAG 57.414 41.667 0.00 6.61 43.80 2.57
1489 5629 6.602410 AAACTAGTTTAGTCCCTAGTCACC 57.398 41.667 19.26 0.00 42.26 4.02
1490 5630 4.608269 ACTAGTTTAGTCCCTAGTCACCC 58.392 47.826 0.00 0.00 39.69 4.61
1491 5631 2.830293 AGTTTAGTCCCTAGTCACCCC 58.170 52.381 0.00 0.00 0.00 4.95
1492 5632 2.113052 AGTTTAGTCCCTAGTCACCCCA 59.887 50.000 0.00 0.00 0.00 4.96
1493 5633 2.235650 GTTTAGTCCCTAGTCACCCCAC 59.764 54.545 0.00 0.00 0.00 4.61
1494 5634 0.337428 TAGTCCCTAGTCACCCCACC 59.663 60.000 0.00 0.00 0.00 4.61
1495 5635 1.993948 GTCCCTAGTCACCCCACCC 60.994 68.421 0.00 0.00 0.00 4.61
1496 5636 2.181773 TCCCTAGTCACCCCACCCT 61.182 63.158 0.00 0.00 0.00 4.34
1497 5637 1.689582 CCCTAGTCACCCCACCCTC 60.690 68.421 0.00 0.00 0.00 4.30
1498 5638 1.080354 CCTAGTCACCCCACCCTCA 59.920 63.158 0.00 0.00 0.00 3.86
1499 5639 0.546747 CCTAGTCACCCCACCCTCAA 60.547 60.000 0.00 0.00 0.00 3.02
1500 5640 0.613777 CTAGTCACCCCACCCTCAAC 59.386 60.000 0.00 0.00 0.00 3.18
1501 5641 0.192566 TAGTCACCCCACCCTCAACT 59.807 55.000 0.00 0.00 0.00 3.16
1502 5642 0.697854 AGTCACCCCACCCTCAACTT 60.698 55.000 0.00 0.00 0.00 2.66
1503 5643 0.185175 GTCACCCCACCCTCAACTTT 59.815 55.000 0.00 0.00 0.00 2.66
1504 5644 0.930726 TCACCCCACCCTCAACTTTT 59.069 50.000 0.00 0.00 0.00 2.27
1505 5645 2.136863 TCACCCCACCCTCAACTTTTA 58.863 47.619 0.00 0.00 0.00 1.52
1506 5646 2.158579 TCACCCCACCCTCAACTTTTAC 60.159 50.000 0.00 0.00 0.00 2.01
1507 5647 2.141067 ACCCCACCCTCAACTTTTACT 58.859 47.619 0.00 0.00 0.00 2.24
1508 5648 2.158519 ACCCCACCCTCAACTTTTACTG 60.159 50.000 0.00 0.00 0.00 2.74
1509 5649 2.107552 CCCCACCCTCAACTTTTACTGA 59.892 50.000 0.00 0.00 0.00 3.41
1510 5650 3.146847 CCCACCCTCAACTTTTACTGAC 58.853 50.000 0.00 0.00 0.00 3.51
1511 5651 3.181443 CCCACCCTCAACTTTTACTGACT 60.181 47.826 0.00 0.00 0.00 3.41
1512 5652 4.041198 CCCACCCTCAACTTTTACTGACTA 59.959 45.833 0.00 0.00 0.00 2.59
1513 5653 5.238583 CCACCCTCAACTTTTACTGACTAG 58.761 45.833 0.00 0.00 0.00 2.57
1514 5654 5.011738 CCACCCTCAACTTTTACTGACTAGA 59.988 44.000 0.00 0.00 0.00 2.43
1515 5655 6.159988 CACCCTCAACTTTTACTGACTAGAG 58.840 44.000 0.00 0.00 0.00 2.43
1516 5656 6.015350 CACCCTCAACTTTTACTGACTAGAGA 60.015 42.308 0.00 0.00 0.00 3.10
1517 5657 6.015265 ACCCTCAACTTTTACTGACTAGAGAC 60.015 42.308 0.00 0.00 0.00 3.36
1518 5658 6.209788 CCCTCAACTTTTACTGACTAGAGACT 59.790 42.308 0.00 0.00 0.00 3.24
1519 5659 7.393796 CCCTCAACTTTTACTGACTAGAGACTA 59.606 40.741 0.00 0.00 0.00 2.59
1520 5660 8.455682 CCTCAACTTTTACTGACTAGAGACTAG 58.544 40.741 0.00 0.00 0.00 2.57
1521 5661 8.921353 TCAACTTTTACTGACTAGAGACTAGT 57.079 34.615 10.61 10.61 0.00 2.57
1541 5681 7.688343 ACTAGTAGTAGTCACCTTTAGTCAGT 58.312 38.462 0.00 0.00 34.00 3.41
1542 5682 8.820831 ACTAGTAGTAGTCACCTTTAGTCAGTA 58.179 37.037 0.00 0.00 34.00 2.74
1543 5683 9.664332 CTAGTAGTAGTCACCTTTAGTCAGTAA 57.336 37.037 0.00 0.00 0.00 2.24
1544 5684 8.930846 AGTAGTAGTCACCTTTAGTCAGTAAA 57.069 34.615 0.00 0.00 0.00 2.01
1545 5685 8.791675 AGTAGTAGTCACCTTTAGTCAGTAAAC 58.208 37.037 0.00 0.00 0.00 2.01
1546 5686 6.990798 AGTAGTCACCTTTAGTCAGTAAACC 58.009 40.000 0.00 0.00 0.00 3.27
1547 5687 6.781507 AGTAGTCACCTTTAGTCAGTAAACCT 59.218 38.462 0.00 0.00 0.00 3.50
1548 5688 6.099159 AGTCACCTTTAGTCAGTAAACCTC 57.901 41.667 0.00 0.00 0.00 3.85
1549 5689 5.011840 AGTCACCTTTAGTCAGTAAACCTCC 59.988 44.000 0.00 0.00 0.00 4.30
1550 5690 4.903049 TCACCTTTAGTCAGTAAACCTCCA 59.097 41.667 0.00 0.00 0.00 3.86
1551 5691 5.367352 TCACCTTTAGTCAGTAAACCTCCAA 59.633 40.000 0.00 0.00 0.00 3.53
1552 5692 6.059484 CACCTTTAGTCAGTAAACCTCCAAA 58.941 40.000 0.00 0.00 0.00 3.28
1553 5693 6.017357 CACCTTTAGTCAGTAAACCTCCAAAC 60.017 42.308 0.00 0.00 0.00 2.93
1554 5694 6.059484 CCTTTAGTCAGTAAACCTCCAAACA 58.941 40.000 0.00 0.00 0.00 2.83
1555 5695 6.017357 CCTTTAGTCAGTAAACCTCCAAACAC 60.017 42.308 0.00 0.00 0.00 3.32
1556 5696 3.816994 AGTCAGTAAACCTCCAAACACC 58.183 45.455 0.00 0.00 0.00 4.16
1557 5697 2.882761 GTCAGTAAACCTCCAAACACCC 59.117 50.000 0.00 0.00 0.00 4.61
1558 5698 2.158579 TCAGTAAACCTCCAAACACCCC 60.159 50.000 0.00 0.00 0.00 4.95
1559 5699 2.141067 AGTAAACCTCCAAACACCCCT 58.859 47.619 0.00 0.00 0.00 4.79
1560 5700 2.158519 AGTAAACCTCCAAACACCCCTG 60.159 50.000 0.00 0.00 0.00 4.45
1561 5701 0.930726 AAACCTCCAAACACCCCTGA 59.069 50.000 0.00 0.00 0.00 3.86
1562 5702 0.185175 AACCTCCAAACACCCCTGAC 59.815 55.000 0.00 0.00 0.00 3.51
1563 5703 0.697854 ACCTCCAAACACCCCTGACT 60.698 55.000 0.00 0.00 0.00 3.41
1564 5704 0.478507 CCTCCAAACACCCCTGACTT 59.521 55.000 0.00 0.00 0.00 3.01
1565 5705 1.133482 CCTCCAAACACCCCTGACTTT 60.133 52.381 0.00 0.00 0.00 2.66
1566 5706 2.666317 CTCCAAACACCCCTGACTTTT 58.334 47.619 0.00 0.00 0.00 2.27
1567 5707 3.435890 CCTCCAAACACCCCTGACTTTTA 60.436 47.826 0.00 0.00 0.00 1.52
1568 5708 3.558033 TCCAAACACCCCTGACTTTTAC 58.442 45.455 0.00 0.00 0.00 2.01
1569 5709 3.203487 TCCAAACACCCCTGACTTTTACT 59.797 43.478 0.00 0.00 0.00 2.24
1570 5710 3.317993 CCAAACACCCCTGACTTTTACTG 59.682 47.826 0.00 0.00 0.00 2.74
1571 5711 4.204012 CAAACACCCCTGACTTTTACTGA 58.796 43.478 0.00 0.00 0.00 3.41
1572 5712 3.487120 ACACCCCTGACTTTTACTGAC 57.513 47.619 0.00 0.00 0.00 3.51
1573 5713 3.046374 ACACCCCTGACTTTTACTGACT 58.954 45.455 0.00 0.00 0.00 3.41
1574 5714 4.228824 ACACCCCTGACTTTTACTGACTA 58.771 43.478 0.00 0.00 0.00 2.59
1575 5715 4.657039 ACACCCCTGACTTTTACTGACTAA 59.343 41.667 0.00 0.00 0.00 2.24
1576 5716 5.131475 ACACCCCTGACTTTTACTGACTAAA 59.869 40.000 0.00 0.00 0.00 1.85
1577 5717 5.701290 CACCCCTGACTTTTACTGACTAAAG 59.299 44.000 0.00 0.00 37.38 1.85
1578 5718 5.368816 ACCCCTGACTTTTACTGACTAAAGT 59.631 40.000 0.00 0.00 44.78 2.66
1583 5723 5.238624 ACTTTTACTGACTAAAGTCCCCC 57.761 43.478 7.63 0.00 44.15 5.40
1584 5724 4.912133 ACTTTTACTGACTAAAGTCCCCCT 59.088 41.667 7.63 0.00 44.15 4.79
1585 5725 5.012871 ACTTTTACTGACTAAAGTCCCCCTC 59.987 44.000 7.63 0.00 44.15 4.30
1586 5726 4.415224 TTACTGACTAAAGTCCCCCTCT 57.585 45.455 7.63 0.00 44.15 3.69
1587 5727 2.822697 ACTGACTAAAGTCCCCCTCTC 58.177 52.381 7.63 0.00 44.15 3.20
1588 5728 2.384029 ACTGACTAAAGTCCCCCTCTCT 59.616 50.000 7.63 0.00 44.15 3.10
1589 5729 3.028130 CTGACTAAAGTCCCCCTCTCTC 58.972 54.545 7.63 0.00 44.15 3.20
1590 5730 2.655407 TGACTAAAGTCCCCCTCTCTCT 59.345 50.000 7.63 0.00 44.15 3.10
1591 5731 3.077695 TGACTAAAGTCCCCCTCTCTCTT 59.922 47.826 7.63 0.00 44.15 2.85
1592 5732 4.098155 GACTAAAGTCCCCCTCTCTCTTT 58.902 47.826 0.00 0.00 39.07 2.52
1593 5733 4.504382 ACTAAAGTCCCCCTCTCTCTTTT 58.496 43.478 0.00 0.00 32.01 2.27
1594 5734 4.532916 ACTAAAGTCCCCCTCTCTCTTTTC 59.467 45.833 0.00 0.00 32.01 2.29
1595 5735 3.283712 AAGTCCCCCTCTCTCTTTTCT 57.716 47.619 0.00 0.00 0.00 2.52
1596 5736 4.421574 AAGTCCCCCTCTCTCTTTTCTA 57.578 45.455 0.00 0.00 0.00 2.10
1597 5737 4.421574 AGTCCCCCTCTCTCTTTTCTAA 57.578 45.455 0.00 0.00 0.00 2.10
1598 5738 4.966611 AGTCCCCCTCTCTCTTTTCTAAT 58.033 43.478 0.00 0.00 0.00 1.73
1599 5739 5.354848 AGTCCCCCTCTCTCTTTTCTAATT 58.645 41.667 0.00 0.00 0.00 1.40
1600 5740 5.190726 AGTCCCCCTCTCTCTTTTCTAATTG 59.809 44.000 0.00 0.00 0.00 2.32
1601 5741 4.475016 TCCCCCTCTCTCTTTTCTAATTGG 59.525 45.833 0.00 0.00 0.00 3.16
1602 5742 4.228438 CCCCCTCTCTCTTTTCTAATTGGT 59.772 45.833 0.00 0.00 0.00 3.67
1603 5743 5.189180 CCCCTCTCTCTTTTCTAATTGGTG 58.811 45.833 0.00 0.00 0.00 4.17
1604 5744 5.280727 CCCCTCTCTCTTTTCTAATTGGTGT 60.281 44.000 0.00 0.00 0.00 4.16
1605 5745 6.241645 CCCTCTCTCTTTTCTAATTGGTGTT 58.758 40.000 0.00 0.00 0.00 3.32
1606 5746 6.150140 CCCTCTCTCTTTTCTAATTGGTGTTG 59.850 42.308 0.00 0.00 0.00 3.33
1607 5747 6.348868 CCTCTCTCTTTTCTAATTGGTGTTGC 60.349 42.308 0.00 0.00 0.00 4.17
1608 5748 6.061441 TCTCTCTTTTCTAATTGGTGTTGCA 58.939 36.000 0.00 0.00 0.00 4.08
1609 5749 6.017109 TCTCTCTTTTCTAATTGGTGTTGCAC 60.017 38.462 0.00 0.00 0.00 4.57
1610 5750 5.592282 TCTCTTTTCTAATTGGTGTTGCACA 59.408 36.000 1.61 0.00 35.86 4.57
1611 5751 6.096141 TCTCTTTTCTAATTGGTGTTGCACAA 59.904 34.615 1.61 0.00 35.86 3.33
1612 5752 6.634805 TCTTTTCTAATTGGTGTTGCACAAA 58.365 32.000 1.61 0.00 35.86 2.83
1613 5753 7.099764 TCTTTTCTAATTGGTGTTGCACAAAA 58.900 30.769 1.61 0.00 35.86 2.44
1614 5754 6.900568 TTTCTAATTGGTGTTGCACAAAAG 57.099 33.333 1.61 0.00 35.86 2.27
1615 5755 5.843673 TCTAATTGGTGTTGCACAAAAGA 57.156 34.783 1.61 0.00 35.86 2.52
1616 5756 5.587289 TCTAATTGGTGTTGCACAAAAGAC 58.413 37.500 1.61 0.00 35.86 3.01
1617 5757 3.883830 ATTGGTGTTGCACAAAAGACA 57.116 38.095 1.61 0.00 35.86 3.41
1618 5758 3.883830 TTGGTGTTGCACAAAAGACAT 57.116 38.095 1.61 0.00 35.86 3.06
1619 5759 3.883830 TGGTGTTGCACAAAAGACATT 57.116 38.095 1.61 0.00 35.86 2.71
1620 5760 4.199432 TGGTGTTGCACAAAAGACATTT 57.801 36.364 1.61 0.00 35.86 2.32
1621 5761 5.330455 TGGTGTTGCACAAAAGACATTTA 57.670 34.783 1.61 0.00 35.86 1.40
1622 5762 5.724328 TGGTGTTGCACAAAAGACATTTAA 58.276 33.333 1.61 0.00 35.86 1.52
1623 5763 6.344500 TGGTGTTGCACAAAAGACATTTAAT 58.656 32.000 1.61 0.00 35.86 1.40
1624 5764 7.492524 TGGTGTTGCACAAAAGACATTTAATA 58.507 30.769 1.61 0.00 35.86 0.98
1625 5765 7.436673 TGGTGTTGCACAAAAGACATTTAATAC 59.563 33.333 1.61 0.00 35.86 1.89
1626 5766 7.651704 GGTGTTGCACAAAAGACATTTAATACT 59.348 33.333 1.61 0.00 35.86 2.12
1627 5767 8.479280 GTGTTGCACAAAAGACATTTAATACTG 58.521 33.333 0.00 0.00 34.08 2.74
1628 5768 8.409371 TGTTGCACAAAAGACATTTAATACTGA 58.591 29.630 0.00 0.00 0.00 3.41
1629 5769 8.905702 GTTGCACAAAAGACATTTAATACTGAG 58.094 33.333 0.00 0.00 0.00 3.35
1630 5770 8.389779 TGCACAAAAGACATTTAATACTGAGA 57.610 30.769 0.00 0.00 0.00 3.27
1631 5771 8.289618 TGCACAAAAGACATTTAATACTGAGAC 58.710 33.333 0.00 0.00 0.00 3.36
1632 5772 8.289618 GCACAAAAGACATTTAATACTGAGACA 58.710 33.333 0.00 0.00 0.00 3.41
1645 5785 9.890629 TTAATACTGAGACATTTAATGCTGACT 57.109 29.630 4.68 0.20 0.00 3.41
1647 5787 9.539825 AATACTGAGACATTTAATGCTGACTAG 57.460 33.333 4.68 0.00 0.00 2.57
1648 5788 6.940739 ACTGAGACATTTAATGCTGACTAGT 58.059 36.000 4.68 0.00 0.00 2.57
1649 5789 8.067751 ACTGAGACATTTAATGCTGACTAGTA 57.932 34.615 4.68 0.00 0.00 1.82
1650 5790 8.194104 ACTGAGACATTTAATGCTGACTAGTAG 58.806 37.037 4.68 0.00 0.00 2.57
1651 5791 8.067751 TGAGACATTTAATGCTGACTAGTAGT 57.932 34.615 1.37 1.37 0.00 2.73
1652 5792 9.185680 TGAGACATTTAATGCTGACTAGTAGTA 57.814 33.333 1.88 0.00 0.00 1.82
1653 5793 9.672086 GAGACATTTAATGCTGACTAGTAGTAG 57.328 37.037 1.88 2.87 0.00 2.57
1654 5794 9.191479 AGACATTTAATGCTGACTAGTAGTAGT 57.809 33.333 10.09 10.09 42.59 2.73
1666 5806 6.587206 ACTAGTAGTAGTCACCTTCCAAAC 57.413 41.667 0.00 0.00 34.00 2.93
1667 5807 6.073314 ACTAGTAGTAGTCACCTTCCAAACA 58.927 40.000 0.00 0.00 34.00 2.83
1668 5808 5.470047 AGTAGTAGTCACCTTCCAAACAG 57.530 43.478 0.00 0.00 0.00 3.16
1669 5809 3.771577 AGTAGTCACCTTCCAAACAGG 57.228 47.619 0.00 0.00 37.45 4.00
1670 5810 2.372172 AGTAGTCACCTTCCAAACAGGG 59.628 50.000 0.00 0.00 38.24 4.45
1671 5811 1.222567 AGTCACCTTCCAAACAGGGT 58.777 50.000 0.00 0.00 38.24 4.34
1672 5812 1.143073 AGTCACCTTCCAAACAGGGTC 59.857 52.381 0.00 0.00 38.24 4.46
1673 5813 1.143073 GTCACCTTCCAAACAGGGTCT 59.857 52.381 0.00 0.00 38.24 3.85
1674 5814 1.142870 TCACCTTCCAAACAGGGTCTG 59.857 52.381 0.00 0.00 38.24 3.51
1675 5815 1.142870 CACCTTCCAAACAGGGTCTGA 59.857 52.381 1.59 0.00 38.24 3.27
1676 5816 1.143073 ACCTTCCAAACAGGGTCTGAC 59.857 52.381 0.00 0.00 38.24 3.51
1677 5817 1.421646 CCTTCCAAACAGGGTCTGACT 59.578 52.381 7.85 0.00 38.24 3.41
1678 5818 2.637872 CCTTCCAAACAGGGTCTGACTA 59.362 50.000 7.85 0.00 38.24 2.59
1679 5819 3.072476 CCTTCCAAACAGGGTCTGACTAA 59.928 47.826 7.85 0.00 38.24 2.24
1680 5820 4.445735 CCTTCCAAACAGGGTCTGACTAAA 60.446 45.833 7.85 0.00 38.24 1.85
1681 5821 4.781775 TCCAAACAGGGTCTGACTAAAA 57.218 40.909 7.85 0.00 38.24 1.52
1682 5822 5.118729 TCCAAACAGGGTCTGACTAAAAA 57.881 39.130 7.85 0.00 38.24 1.94
1683 5823 4.885325 TCCAAACAGGGTCTGACTAAAAAC 59.115 41.667 7.85 0.00 38.24 2.43
1684 5824 4.887655 CCAAACAGGGTCTGACTAAAAACT 59.112 41.667 7.85 0.00 35.18 2.66
1685 5825 5.359860 CCAAACAGGGTCTGACTAAAAACTT 59.640 40.000 7.85 0.00 35.18 2.66
1686 5826 6.459710 CCAAACAGGGTCTGACTAAAAACTTC 60.460 42.308 7.85 0.00 35.18 3.01
1687 5827 5.632034 ACAGGGTCTGACTAAAAACTTCT 57.368 39.130 7.85 0.00 35.18 2.85
1688 5828 6.742559 ACAGGGTCTGACTAAAAACTTCTA 57.257 37.500 7.85 0.00 35.18 2.10
1689 5829 6.760291 ACAGGGTCTGACTAAAAACTTCTAG 58.240 40.000 7.85 0.00 35.18 2.43
1690 5830 6.326843 ACAGGGTCTGACTAAAAACTTCTAGT 59.673 38.462 7.85 0.00 35.18 2.57
1691 5831 6.869388 CAGGGTCTGACTAAAAACTTCTAGTC 59.131 42.308 7.85 2.91 42.88 2.59
1692 5832 6.783482 AGGGTCTGACTAAAAACTTCTAGTCT 59.217 38.462 7.85 0.00 42.96 3.24
1693 5833 6.869388 GGGTCTGACTAAAAACTTCTAGTCTG 59.131 42.308 7.85 9.33 42.96 3.51
1694 5834 7.255871 GGGTCTGACTAAAAACTTCTAGTCTGA 60.256 40.741 7.85 12.18 44.29 3.27
1696 5836 8.466617 TCTGACTAAAAACTTCTAGTCTGACT 57.533 34.615 15.57 15.57 42.94 3.41
1697 5837 9.570468 TCTGACTAAAAACTTCTAGTCTGACTA 57.430 33.333 16.17 16.17 42.94 2.59
1698 5838 9.615295 CTGACTAAAAACTTCTAGTCTGACTAC 57.385 37.037 13.34 0.68 42.96 2.73
1699 5839 9.352191 TGACTAAAAACTTCTAGTCTGACTACT 57.648 33.333 13.34 0.00 42.96 2.57
1706 5846 9.657419 AAACTTCTAGTCTGACTACTACTAGTC 57.343 37.037 13.34 3.34 46.56 2.59
1727 5867 6.701145 GTCACATGACTAGAGAGTATCCAA 57.299 41.667 0.00 0.00 41.65 3.53
1728 5868 7.101652 GTCACATGACTAGAGAGTATCCAAA 57.898 40.000 0.00 0.00 41.65 3.28
1729 5869 6.975772 GTCACATGACTAGAGAGTATCCAAAC 59.024 42.308 0.00 0.00 41.65 2.93
1730 5870 6.663523 TCACATGACTAGAGAGTATCCAAACA 59.336 38.462 0.00 0.00 35.45 2.83
1731 5871 6.754209 CACATGACTAGAGAGTATCCAAACAC 59.246 42.308 0.00 0.00 35.45 3.32
1732 5872 5.916661 TGACTAGAGAGTATCCAAACACC 57.083 43.478 0.00 0.00 35.45 4.16
1733 5873 5.580998 TGACTAGAGAGTATCCAAACACCT 58.419 41.667 0.00 0.00 35.45 4.00
1734 5874 5.652891 TGACTAGAGAGTATCCAAACACCTC 59.347 44.000 0.00 0.00 35.45 3.85
1735 5875 5.580998 ACTAGAGAGTATCCAAACACCTCA 58.419 41.667 0.00 0.00 32.65 3.86
1736 5876 6.198639 ACTAGAGAGTATCCAAACACCTCAT 58.801 40.000 0.00 0.00 32.65 2.90
1737 5877 7.355101 ACTAGAGAGTATCCAAACACCTCATA 58.645 38.462 0.00 0.00 32.65 2.15
1749 5889 6.319405 CCAAACACCTCATATGATCATCACAA 59.681 38.462 12.53 0.00 0.00 3.33
1758 5916 8.302965 TCATATGATCATCACAAGAATTCGAC 57.697 34.615 12.53 0.00 0.00 4.20
1760 5918 9.415544 CATATGATCATCACAAGAATTCGACTA 57.584 33.333 12.53 0.00 0.00 2.59
1777 5935 6.085555 TCGACTAATGCTTATAGAGGTTGG 57.914 41.667 0.00 0.00 0.00 3.77
1778 5936 5.010719 TCGACTAATGCTTATAGAGGTTGGG 59.989 44.000 0.00 0.00 0.00 4.12
1781 5939 3.864789 ATGCTTATAGAGGTTGGGGTG 57.135 47.619 0.00 0.00 0.00 4.61
1794 5952 0.038166 TGGGGTGAGAGCAACATTCC 59.962 55.000 0.00 0.00 31.69 3.01
1796 5954 1.272147 GGGGTGAGAGCAACATTCCTT 60.272 52.381 0.00 0.00 31.69 3.36
1797 5955 2.519013 GGGTGAGAGCAACATTCCTTT 58.481 47.619 0.00 0.00 31.69 3.11
1798 5956 2.893489 GGGTGAGAGCAACATTCCTTTT 59.107 45.455 0.00 0.00 31.69 2.27
1799 5957 3.321968 GGGTGAGAGCAACATTCCTTTTT 59.678 43.478 0.00 0.00 31.69 1.94
1800 5958 4.522789 GGGTGAGAGCAACATTCCTTTTTA 59.477 41.667 0.00 0.00 31.69 1.52
1801 5959 5.461526 GGTGAGAGCAACATTCCTTTTTAC 58.538 41.667 0.00 0.00 0.00 2.01
1802 5960 5.461526 GTGAGAGCAACATTCCTTTTTACC 58.538 41.667 0.00 0.00 0.00 2.85
1837 5995 4.016838 ATGCAATGAACCACCGGG 57.983 55.556 6.32 0.00 41.29 5.73
1859 6017 3.564511 GATCACACCCAAATTTGACACG 58.435 45.455 19.86 7.41 0.00 4.49
1861 6019 2.098280 TCACACCCAAATTTGACACGTG 59.902 45.455 19.86 15.48 0.00 4.49
1862 6020 2.096248 ACACCCAAATTTGACACGTGT 58.904 42.857 23.64 23.64 0.00 4.49
1863 6021 2.159310 ACACCCAAATTTGACACGTGTG 60.159 45.455 28.82 10.71 32.10 3.82
1879 6037 3.247442 CGTGTGTGACTTATAAAGGCGA 58.753 45.455 0.00 0.00 40.34 5.54
1892 6050 8.560374 ACTTATAAAGGCGAAATATTCTTCAGC 58.440 33.333 0.00 0.00 0.00 4.26
1893 6051 3.951979 AAGGCGAAATATTCTTCAGCG 57.048 42.857 0.00 0.00 0.00 5.18
1897 6055 2.221981 GCGAAATATTCTTCAGCGGGAG 59.778 50.000 0.00 0.00 0.00 4.30
1899 6057 3.491267 CGAAATATTCTTCAGCGGGAGAC 59.509 47.826 0.00 0.00 0.00 3.36
1915 6073 3.305471 GGGAGACGACATTCTATAGGTGC 60.305 52.174 0.00 0.00 0.00 5.01
1917 6075 3.567397 AGACGACATTCTATAGGTGCCT 58.433 45.455 0.00 0.00 0.00 4.75
1940 6098 7.118971 GCCTATGATGACTTTGTCAATCTATCC 59.881 40.741 4.46 0.00 45.96 2.59
1942 6100 5.977635 TGATGACTTTGTCAATCTATCCGT 58.022 37.500 4.46 0.00 45.96 4.69
1963 6121 4.034163 CGTCAGCTTAGTCTCTCGAATGTA 59.966 45.833 0.00 0.00 0.00 2.29
1971 6129 7.429920 GCTTAGTCTCTCGAATGTACTTGTAAG 59.570 40.741 0.00 0.00 0.00 2.34
1977 6135 5.359009 TCTCGAATGTACTTGTAAGGGTAGG 59.641 44.000 0.00 0.00 0.00 3.18
1983 6141 5.592795 TGTACTTGTAAGGGTAGGGTATGT 58.407 41.667 0.00 0.00 0.00 2.29
1988 6146 4.028131 TGTAAGGGTAGGGTATGTGTGAG 58.972 47.826 0.00 0.00 0.00 3.51
1991 6149 1.134491 GGGTAGGGTATGTGTGAGTGC 60.134 57.143 0.00 0.00 0.00 4.40
1992 6150 1.553248 GGTAGGGTATGTGTGAGTGCA 59.447 52.381 0.00 0.00 0.00 4.57
1999 6157 4.512944 GGGTATGTGTGAGTGCATTCATAG 59.487 45.833 15.51 0.00 0.00 2.23
2006 6164 2.107031 TGAGTGCATTCATAGGGGATGG 59.893 50.000 7.97 0.00 36.08 3.51
2026 6193 7.099764 GGATGGGTGTATGTACAGAATCTATG 58.900 42.308 0.33 0.00 36.78 2.23
2077 6244 7.116948 CACTATACATGATTTGGGATTCGAGAC 59.883 40.741 0.00 0.00 0.00 3.36
2078 6245 4.220693 ACATGATTTGGGATTCGAGACA 57.779 40.909 0.00 0.00 0.00 3.41
2122 6289 9.342308 TCTTCTTCTTTAAATCTTTCTCTTGCA 57.658 29.630 0.00 0.00 0.00 4.08
2123 6290 9.956720 CTTCTTCTTTAAATCTTTCTCTTGCAA 57.043 29.630 0.00 0.00 0.00 4.08
2128 6295 9.696917 TCTTTAAATCTTTCTCTTGCAATTTCC 57.303 29.630 0.00 0.00 0.00 3.13
2129 6296 9.480053 CTTTAAATCTTTCTCTTGCAATTTCCA 57.520 29.630 0.00 0.00 0.00 3.53
2130 6297 9.480053 TTTAAATCTTTCTCTTGCAATTTCCAG 57.520 29.630 0.00 0.00 0.00 3.86
2131 6298 6.906157 AATCTTTCTCTTGCAATTTCCAGA 57.094 33.333 0.00 0.00 0.00 3.86
2132 6299 5.954296 TCTTTCTCTTGCAATTTCCAGAG 57.046 39.130 0.00 1.51 0.00 3.35
2133 6300 4.217118 TCTTTCTCTTGCAATTTCCAGAGC 59.783 41.667 0.00 0.00 0.00 4.09
2134 6301 3.430042 TCTCTTGCAATTTCCAGAGCT 57.570 42.857 0.00 0.00 0.00 4.09
2135 6302 3.341823 TCTCTTGCAATTTCCAGAGCTC 58.658 45.455 5.27 5.27 0.00 4.09
2136 6303 3.008813 TCTCTTGCAATTTCCAGAGCTCT 59.991 43.478 11.45 11.45 0.00 4.09
2137 6304 3.341823 TCTTGCAATTTCCAGAGCTCTC 58.658 45.455 14.96 0.00 0.00 3.20
2138 6305 1.730501 TGCAATTTCCAGAGCTCTCG 58.269 50.000 14.96 7.85 34.09 4.04
2139 6306 1.002430 TGCAATTTCCAGAGCTCTCGT 59.998 47.619 14.96 0.00 34.09 4.18
2140 6307 2.079925 GCAATTTCCAGAGCTCTCGTT 58.920 47.619 14.96 1.57 34.09 3.85
2141 6308 2.095053 GCAATTTCCAGAGCTCTCGTTC 59.905 50.000 14.96 0.00 34.09 3.95
2142 6309 2.285827 ATTTCCAGAGCTCTCGTTCG 57.714 50.000 14.96 1.61 34.09 3.95
2143 6310 0.959553 TTTCCAGAGCTCTCGTTCGT 59.040 50.000 14.96 0.00 34.09 3.85
2144 6311 0.959553 TTCCAGAGCTCTCGTTCGTT 59.040 50.000 14.96 0.00 34.09 3.85
2145 6312 1.817357 TCCAGAGCTCTCGTTCGTTA 58.183 50.000 14.96 0.00 34.09 3.18
2146 6313 2.366533 TCCAGAGCTCTCGTTCGTTAT 58.633 47.619 14.96 0.00 34.09 1.89
2147 6314 2.097629 TCCAGAGCTCTCGTTCGTTATG 59.902 50.000 14.96 0.00 34.09 1.90
2148 6315 2.159366 CCAGAGCTCTCGTTCGTTATGT 60.159 50.000 14.96 0.00 34.09 2.29
2149 6316 3.102276 CAGAGCTCTCGTTCGTTATGTC 58.898 50.000 14.96 0.00 34.09 3.06
2150 6317 3.011119 AGAGCTCTCGTTCGTTATGTCT 58.989 45.455 11.45 0.00 34.09 3.41
2151 6318 3.064271 AGAGCTCTCGTTCGTTATGTCTC 59.936 47.826 11.45 0.00 34.09 3.36
2152 6319 2.747989 AGCTCTCGTTCGTTATGTCTCA 59.252 45.455 0.00 0.00 0.00 3.27
2153 6320 3.190744 AGCTCTCGTTCGTTATGTCTCAA 59.809 43.478 0.00 0.00 0.00 3.02
2154 6321 3.544285 GCTCTCGTTCGTTATGTCTCAAG 59.456 47.826 0.00 0.00 0.00 3.02
2155 6322 3.499048 TCTCGTTCGTTATGTCTCAAGC 58.501 45.455 0.00 0.00 0.00 4.01
2156 6323 3.057806 TCTCGTTCGTTATGTCTCAAGCA 60.058 43.478 0.00 0.00 0.00 3.91
2157 6324 3.644823 TCGTTCGTTATGTCTCAAGCAA 58.355 40.909 0.00 0.00 0.00 3.91
2158 6325 3.673338 TCGTTCGTTATGTCTCAAGCAAG 59.327 43.478 0.00 0.00 0.00 4.01
2159 6326 3.722082 CGTTCGTTATGTCTCAAGCAAGC 60.722 47.826 0.00 0.00 0.00 4.01
2160 6327 3.038788 TCGTTATGTCTCAAGCAAGCA 57.961 42.857 0.00 0.00 0.00 3.91
2161 6328 2.736721 TCGTTATGTCTCAAGCAAGCAC 59.263 45.455 0.00 0.00 0.00 4.40
2162 6329 2.738846 CGTTATGTCTCAAGCAAGCACT 59.261 45.455 0.00 0.00 0.00 4.40
2163 6330 3.926527 CGTTATGTCTCAAGCAAGCACTA 59.073 43.478 0.00 0.00 0.00 2.74
2164 6331 4.201628 CGTTATGTCTCAAGCAAGCACTAC 60.202 45.833 0.00 0.00 0.00 2.73
2165 6332 3.692257 ATGTCTCAAGCAAGCACTACT 57.308 42.857 0.00 0.00 0.00 2.57
2166 6333 4.808414 ATGTCTCAAGCAAGCACTACTA 57.192 40.909 0.00 0.00 0.00 1.82
2167 6334 4.179926 TGTCTCAAGCAAGCACTACTAG 57.820 45.455 0.00 0.00 0.00 2.57
2168 6335 3.056536 TGTCTCAAGCAAGCACTACTAGG 60.057 47.826 0.00 0.00 0.00 3.02
2169 6336 3.193691 GTCTCAAGCAAGCACTACTAGGA 59.806 47.826 0.00 0.00 0.00 2.94
2170 6337 3.832490 TCTCAAGCAAGCACTACTAGGAA 59.168 43.478 0.00 0.00 0.00 3.36
2171 6338 4.283467 TCTCAAGCAAGCACTACTAGGAAA 59.717 41.667 0.00 0.00 0.00 3.13
2172 6339 4.968259 TCAAGCAAGCACTACTAGGAAAA 58.032 39.130 0.00 0.00 0.00 2.29
2173 6340 5.560724 TCAAGCAAGCACTACTAGGAAAAT 58.439 37.500 0.00 0.00 0.00 1.82
2174 6341 5.643777 TCAAGCAAGCACTACTAGGAAAATC 59.356 40.000 0.00 0.00 0.00 2.17
2175 6342 4.518249 AGCAAGCACTACTAGGAAAATCC 58.482 43.478 0.00 0.00 36.58 3.01
2177 6344 4.944317 GCAAGCACTACTAGGAAAATCCTT 59.056 41.667 3.90 0.00 46.91 3.36
2178 6345 6.070194 AGCAAGCACTACTAGGAAAATCCTTA 60.070 38.462 3.90 0.00 46.91 2.69
2179 6346 6.768381 GCAAGCACTACTAGGAAAATCCTTAT 59.232 38.462 3.90 0.00 46.91 1.73
2180 6347 7.931948 GCAAGCACTACTAGGAAAATCCTTATA 59.068 37.037 3.90 0.00 46.91 0.98
2181 6348 9.482627 CAAGCACTACTAGGAAAATCCTTATAG 57.517 37.037 3.90 9.08 46.91 1.31
2182 6349 7.672240 AGCACTACTAGGAAAATCCTTATAGC 58.328 38.462 3.90 2.85 46.91 2.97
2183 6350 6.874664 GCACTACTAGGAAAATCCTTATAGCC 59.125 42.308 3.90 0.05 46.91 3.93
2184 6351 7.091443 CACTACTAGGAAAATCCTTATAGCCG 58.909 42.308 3.90 0.00 46.91 5.52
2185 6352 6.781507 ACTACTAGGAAAATCCTTATAGCCGT 59.218 38.462 3.90 0.00 46.91 5.68
2186 6353 6.496144 ACTAGGAAAATCCTTATAGCCGTT 57.504 37.500 3.90 0.00 46.91 4.44
2187 6354 7.607615 ACTAGGAAAATCCTTATAGCCGTTA 57.392 36.000 3.90 0.00 46.91 3.18
2188 6355 7.440198 ACTAGGAAAATCCTTATAGCCGTTAC 58.560 38.462 3.90 0.00 46.91 2.50
2189 6356 5.618236 AGGAAAATCCTTATAGCCGTTACC 58.382 41.667 0.00 0.00 46.91 2.85
2190 6357 5.368816 AGGAAAATCCTTATAGCCGTTACCT 59.631 40.000 0.00 0.00 46.91 3.08
2191 6358 6.060136 GGAAAATCCTTATAGCCGTTACCTT 58.940 40.000 0.00 0.00 32.53 3.50
2192 6359 7.071572 AGGAAAATCCTTATAGCCGTTACCTTA 59.928 37.037 0.00 0.00 46.91 2.69
2193 6360 7.172190 GGAAAATCCTTATAGCCGTTACCTTAC 59.828 40.741 0.00 0.00 32.53 2.34
2194 6361 5.735285 ATCCTTATAGCCGTTACCTTACC 57.265 43.478 0.00 0.00 0.00 2.85
2195 6362 3.897505 TCCTTATAGCCGTTACCTTACCC 59.102 47.826 0.00 0.00 0.00 3.69
2196 6363 3.007290 CCTTATAGCCGTTACCTTACCCC 59.993 52.174 0.00 0.00 0.00 4.95
2197 6364 1.427809 ATAGCCGTTACCTTACCCCC 58.572 55.000 0.00 0.00 0.00 5.40
2198 6365 0.042431 TAGCCGTTACCTTACCCCCA 59.958 55.000 0.00 0.00 0.00 4.96
2199 6366 0.841594 AGCCGTTACCTTACCCCCAA 60.842 55.000 0.00 0.00 0.00 4.12
2200 6367 0.038021 GCCGTTACCTTACCCCCAAA 59.962 55.000 0.00 0.00 0.00 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.306482 CCCCCTCTCTCCTGCTCAA 60.306 63.158 0.00 0.00 0.00 3.02
57 58 2.750712 TCGGCCCTATAGTTTGTTTTGC 59.249 45.455 0.00 0.00 0.00 3.68
86 87 1.447838 GAGCATCGACAGCCGGAAA 60.448 57.895 5.05 0.00 39.14 3.13
87 88 1.035385 TAGAGCATCGACAGCCGGAA 61.035 55.000 5.05 0.00 42.67 4.30
115 129 3.304123 GGCACGTGCACACAAAATAACTA 60.304 43.478 38.60 0.00 44.36 2.24
119 133 0.312416 GGGCACGTGCACACAAAATA 59.688 50.000 38.60 0.00 45.57 1.40
141 155 0.393537 GGTGTCTGGGGCTCATTCTG 60.394 60.000 0.00 0.00 0.00 3.02
145 159 2.976490 GCTGGTGTCTGGGGCTCAT 61.976 63.158 0.00 0.00 0.00 2.90
150 164 1.488705 TAGGTTGCTGGTGTCTGGGG 61.489 60.000 0.00 0.00 0.00 4.96
243 258 7.176340 GCTACTCCCTCCGTCTCTTAATATAAA 59.824 40.741 0.00 0.00 0.00 1.40
254 269 1.867363 AAATGCTACTCCCTCCGTCT 58.133 50.000 0.00 0.00 0.00 4.18
341 356 7.550551 TCTTCTGAATTGTAAATAGTGAGCTGG 59.449 37.037 0.00 0.00 0.00 4.85
452 467 2.860735 CGCCACAACAAAATCGGAAAAA 59.139 40.909 0.00 0.00 0.00 1.94
457 472 1.003262 CTGCGCCACAACAAAATCGG 61.003 55.000 4.18 0.00 0.00 4.18
564 2906 0.692476 TGTGCATAGAAGTGCCACCT 59.308 50.000 0.00 0.00 44.43 4.00
567 2909 3.689347 AGATTTGTGCATAGAAGTGCCA 58.311 40.909 0.00 0.00 44.43 4.92
570 4585 6.492007 AGTTGAGATTTGTGCATAGAAGTG 57.508 37.500 0.00 0.00 0.00 3.16
609 4624 6.142480 CGCACCTATGTTTTTCTATCTACGAG 59.858 42.308 0.00 0.00 0.00 4.18
611 4626 5.747197 ACGCACCTATGTTTTTCTATCTACG 59.253 40.000 0.00 0.00 0.00 3.51
624 4738 1.078426 GAAGCCCACGCACCTATGT 60.078 57.895 0.00 0.00 37.52 2.29
686 4808 6.968904 CACATGTGTACTTAAGATGGCAATTC 59.031 38.462 18.03 0.00 0.00 2.17
692 4814 7.387673 TCAAGTTCACATGTGTACTTAAGATGG 59.612 37.037 35.67 26.21 45.28 3.51
719 4841 5.395103 GGATCATATAGCTAGCTTGACCAGG 60.395 48.000 24.88 6.80 0.00 4.45
861 4991 0.107456 ATGTAAGCGGAGGCAGGATG 59.893 55.000 0.00 0.00 43.41 3.51
863 4993 0.975556 TGATGTAAGCGGAGGCAGGA 60.976 55.000 0.00 0.00 43.41 3.86
890 5020 8.269317 TGGTCTTGTAAGGTATTTATAGGGTTG 58.731 37.037 0.00 0.00 0.00 3.77
909 5039 2.146342 CAGCTGGTGTAAGTGGTCTTG 58.854 52.381 5.57 0.00 35.36 3.02
910 5040 2.047061 TCAGCTGGTGTAAGTGGTCTT 58.953 47.619 15.13 0.00 37.65 3.01
927 5060 3.320879 ATCAGGGCACGCTGGTCAG 62.321 63.158 13.94 0.00 0.00 3.51
928 5061 3.315142 GATCAGGGCACGCTGGTCA 62.315 63.158 19.68 0.77 36.96 4.02
929 5062 2.512515 GATCAGGGCACGCTGGTC 60.513 66.667 11.61 11.61 31.74 4.02
1086 5219 1.299541 GCATGTAGAACCCCACATCG 58.700 55.000 0.00 0.00 33.12 3.84
1176 5309 1.153628 GATGACGGGGGTCTTGACG 60.154 63.158 0.00 0.00 0.00 4.35
1201 5334 9.811995 AGTACGAGTTGCAAATATAGTGAATAA 57.188 29.630 0.00 0.00 0.00 1.40
1223 5361 6.051717 TGACAACTCTAGTATACCGGAGTAC 58.948 44.000 21.10 10.76 37.97 2.73
1272 5410 1.401018 GGGAAACACGCATACAGTTGC 60.401 52.381 0.00 0.00 39.29 4.17
1309 5448 1.103803 CAAGAGCAGATTGCCAGCAT 58.896 50.000 0.00 0.00 46.52 3.79
1370 5510 3.769844 TCTCTAGTGATCCAAACACCCTC 59.230 47.826 0.00 0.00 38.82 4.30
1371 5511 3.515901 GTCTCTAGTGATCCAAACACCCT 59.484 47.826 0.00 0.00 38.82 4.34
1372 5512 3.515901 AGTCTCTAGTGATCCAAACACCC 59.484 47.826 0.00 0.00 38.82 4.61
1373 5513 4.810191 AGTCTCTAGTGATCCAAACACC 57.190 45.455 0.00 0.00 38.82 4.16
1374 5514 6.600032 TCTCTAGTCTCTAGTGATCCAAACAC 59.400 42.308 0.00 0.00 38.38 3.32
1375 5515 6.600032 GTCTCTAGTCTCTAGTGATCCAAACA 59.400 42.308 10.35 0.00 0.00 2.83
1376 5516 6.826741 AGTCTCTAGTCTCTAGTGATCCAAAC 59.173 42.308 10.35 0.00 0.00 2.93
1377 5517 6.964464 AGTCTCTAGTCTCTAGTGATCCAAA 58.036 40.000 10.35 0.00 0.00 3.28
1378 5518 6.569127 AGTCTCTAGTCTCTAGTGATCCAA 57.431 41.667 10.35 0.00 0.00 3.53
1379 5519 7.070629 TCTAGTCTCTAGTCTCTAGTGATCCA 58.929 42.308 10.35 1.89 33.72 3.41
1380 5520 7.450634 TCTCTAGTCTCTAGTCTCTAGTGATCC 59.549 44.444 10.35 2.10 32.14 3.36
1381 5521 8.298140 GTCTCTAGTCTCTAGTCTCTAGTGATC 58.702 44.444 16.66 0.00 36.30 2.92
1382 5522 8.005388 AGTCTCTAGTCTCTAGTCTCTAGTGAT 58.995 40.741 16.66 4.92 36.30 3.06
1383 5523 7.351952 AGTCTCTAGTCTCTAGTCTCTAGTGA 58.648 42.308 13.18 13.13 33.58 3.41
1384 5524 7.584122 AGTCTCTAGTCTCTAGTCTCTAGTG 57.416 44.000 13.18 11.79 33.72 2.74
1385 5525 8.501070 ACTAGTCTCTAGTCTCTAGTCTCTAGT 58.499 40.741 18.30 18.30 38.76 2.57
1386 5526 8.921353 ACTAGTCTCTAGTCTCTAGTCTCTAG 57.079 42.308 13.40 17.62 38.76 2.43
1388 5528 8.501070 ACTACTAGTCTCTAGTCTCTAGTCTCT 58.499 40.741 18.66 7.39 41.78 3.10
1389 5529 8.688747 ACTACTAGTCTCTAGTCTCTAGTCTC 57.311 42.308 18.66 0.00 41.78 3.36
1390 5530 9.790344 CTACTACTAGTCTCTAGTCTCTAGTCT 57.210 40.741 18.66 12.09 41.78 3.24
1391 5531 9.566432 ACTACTACTAGTCTCTAGTCTCTAGTC 57.434 40.741 18.66 0.00 41.78 2.59
1392 5532 9.566432 GACTACTACTAGTCTCTAGTCTCTAGT 57.434 40.741 18.66 18.91 44.02 2.57
1393 5533 9.565090 TGACTACTACTAGTCTCTAGTCTCTAG 57.435 40.741 22.69 10.54 46.53 2.43
1394 5534 9.342308 GTGACTACTACTAGTCTCTAGTCTCTA 57.658 40.741 22.69 10.09 46.53 2.43
1395 5535 7.286316 GGTGACTACTACTAGTCTCTAGTCTCT 59.714 44.444 22.69 3.28 46.53 3.10
1396 5536 7.286316 AGGTGACTACTACTAGTCTCTAGTCTC 59.714 44.444 22.69 20.28 46.53 3.36
1397 5537 7.128077 AGGTGACTACTACTAGTCTCTAGTCT 58.872 42.308 22.69 10.09 46.53 3.24
1398 5538 7.352079 AGGTGACTACTACTAGTCTCTAGTC 57.648 44.000 18.91 18.91 46.53 2.59
1399 5539 7.738437 AAGGTGACTACTACTAGTCTCTAGT 57.262 40.000 0.00 12.91 46.53 2.57
1400 5540 9.754382 CTAAAGGTGACTACTACTAGTCTCTAG 57.246 40.741 0.00 0.00 46.53 2.43
1401 5541 9.265862 ACTAAAGGTGACTACTACTAGTCTCTA 57.734 37.037 0.00 0.00 46.53 2.43
1402 5542 8.149631 ACTAAAGGTGACTACTACTAGTCTCT 57.850 38.462 0.00 5.95 46.53 3.10
1403 5543 8.040132 TGACTAAAGGTGACTACTACTAGTCTC 58.960 40.741 0.00 6.95 46.53 3.36
1404 5544 7.915930 TGACTAAAGGTGACTACTACTAGTCT 58.084 38.462 0.00 0.00 46.53 3.24
1405 5545 7.823799 ACTGACTAAAGGTGACTACTACTAGTC 59.176 40.741 0.00 3.34 46.56 2.59
1406 5546 7.688343 ACTGACTAAAGGTGACTACTACTAGT 58.312 38.462 0.00 0.00 42.68 2.57
1407 5547 9.664332 TTACTGACTAAAGGTGACTACTACTAG 57.336 37.037 0.00 0.00 42.68 2.57
1409 5549 8.791675 GTTTACTGACTAAAGGTGACTACTACT 58.208 37.037 0.00 0.00 42.68 2.57
1410 5550 8.026026 GGTTTACTGACTAAAGGTGACTACTAC 58.974 40.741 0.00 0.00 42.68 2.73
1411 5551 7.946776 AGGTTTACTGACTAAAGGTGACTACTA 59.053 37.037 0.00 0.00 42.68 1.82
1412 5552 6.781507 AGGTTTACTGACTAAAGGTGACTACT 59.218 38.462 0.00 0.00 42.68 2.57
1413 5553 6.990798 AGGTTTACTGACTAAAGGTGACTAC 58.009 40.000 0.00 0.00 42.68 2.73
1414 5554 6.210185 GGAGGTTTACTGACTAAAGGTGACTA 59.790 42.308 0.00 0.00 42.68 2.59
1416 5556 5.221581 TGGAGGTTTACTGACTAAAGGTGAC 60.222 44.000 0.00 0.00 0.00 3.67
1417 5557 4.903049 TGGAGGTTTACTGACTAAAGGTGA 59.097 41.667 0.00 0.00 0.00 4.02
1418 5558 5.223449 TGGAGGTTTACTGACTAAAGGTG 57.777 43.478 0.00 0.00 0.00 4.00
1419 5559 5.899631 TTGGAGGTTTACTGACTAAAGGT 57.100 39.130 0.00 0.00 0.00 3.50
1420 5560 6.017357 GTGTTTGGAGGTTTACTGACTAAAGG 60.017 42.308 0.00 0.00 0.00 3.11
1421 5561 6.017357 GGTGTTTGGAGGTTTACTGACTAAAG 60.017 42.308 0.00 0.00 0.00 1.85
1422 5562 5.824097 GGTGTTTGGAGGTTTACTGACTAAA 59.176 40.000 0.00 0.00 0.00 1.85
1423 5563 5.370679 GGTGTTTGGAGGTTTACTGACTAA 58.629 41.667 0.00 0.00 0.00 2.24
1424 5564 4.202388 GGGTGTTTGGAGGTTTACTGACTA 60.202 45.833 0.00 0.00 0.00 2.59
1425 5565 3.434596 GGGTGTTTGGAGGTTTACTGACT 60.435 47.826 0.00 0.00 0.00 3.41
1426 5566 2.882761 GGGTGTTTGGAGGTTTACTGAC 59.117 50.000 0.00 0.00 0.00 3.51
1427 5567 2.781174 AGGGTGTTTGGAGGTTTACTGA 59.219 45.455 0.00 0.00 0.00 3.41
1428 5568 3.223674 AGGGTGTTTGGAGGTTTACTG 57.776 47.619 0.00 0.00 0.00 2.74
1429 5569 3.203487 TCAAGGGTGTTTGGAGGTTTACT 59.797 43.478 0.00 0.00 0.00 2.24
1430 5570 3.317149 GTCAAGGGTGTTTGGAGGTTTAC 59.683 47.826 0.00 0.00 0.00 2.01
1431 5571 3.203487 AGTCAAGGGTGTTTGGAGGTTTA 59.797 43.478 0.00 0.00 0.00 2.01
1432 5572 2.024369 AGTCAAGGGTGTTTGGAGGTTT 60.024 45.455 0.00 0.00 0.00 3.27
1433 5573 1.569072 AGTCAAGGGTGTTTGGAGGTT 59.431 47.619 0.00 0.00 0.00 3.50
1434 5574 1.222567 AGTCAAGGGTGTTTGGAGGT 58.777 50.000 0.00 0.00 0.00 3.85
1435 5575 2.372172 ACTAGTCAAGGGTGTTTGGAGG 59.628 50.000 0.00 0.00 0.00 4.30
1436 5576 3.403038 CACTAGTCAAGGGTGTTTGGAG 58.597 50.000 0.00 0.00 0.00 3.86
1437 5577 2.105821 CCACTAGTCAAGGGTGTTTGGA 59.894 50.000 0.00 0.00 0.00 3.53
1438 5578 2.504367 CCACTAGTCAAGGGTGTTTGG 58.496 52.381 0.00 0.00 0.00 3.28
1439 5579 2.504367 CCCACTAGTCAAGGGTGTTTG 58.496 52.381 8.36 0.00 37.81 2.93
1440 5580 2.951229 CCCACTAGTCAAGGGTGTTT 57.049 50.000 8.36 0.00 37.81 2.83
1446 5586 4.884668 TTTAGTCACCCACTAGTCAAGG 57.115 45.455 0.00 0.00 38.90 3.61
1447 5587 5.855045 AGTTTTAGTCACCCACTAGTCAAG 58.145 41.667 0.00 0.00 38.90 3.02
1448 5588 5.881923 AGTTTTAGTCACCCACTAGTCAA 57.118 39.130 0.00 0.00 38.90 3.18
1449 5589 6.073314 ACTAGTTTTAGTCACCCACTAGTCA 58.927 40.000 4.77 0.00 44.42 3.41
1450 5590 6.587206 ACTAGTTTTAGTCACCCACTAGTC 57.413 41.667 4.77 0.00 44.42 2.59
1452 5592 8.983307 CTAAACTAGTTTTAGTCACCCACTAG 57.017 38.462 25.07 8.57 41.30 2.57
1469 5609 3.959449 GGGGTGACTAGGGACTAAACTAG 59.041 52.174 0.00 0.00 42.17 2.57
1470 5610 3.337605 TGGGGTGACTAGGGACTAAACTA 59.662 47.826 0.00 0.00 42.17 2.24
1471 5611 2.113052 TGGGGTGACTAGGGACTAAACT 59.887 50.000 0.00 0.00 42.17 2.66
1472 5612 2.235650 GTGGGGTGACTAGGGACTAAAC 59.764 54.545 0.00 0.00 42.17 2.01
1473 5613 2.543635 GTGGGGTGACTAGGGACTAAA 58.456 52.381 0.00 0.00 42.17 1.85
1474 5614 1.273438 GGTGGGGTGACTAGGGACTAA 60.273 57.143 0.00 0.00 42.17 2.24
1475 5615 0.337428 GGTGGGGTGACTAGGGACTA 59.663 60.000 0.00 0.00 41.75 2.59
1476 5616 1.080538 GGTGGGGTGACTAGGGACT 59.919 63.158 0.00 0.00 46.37 3.85
1477 5617 1.993948 GGGTGGGGTGACTAGGGAC 60.994 68.421 0.00 0.00 0.00 4.46
1478 5618 2.177529 GAGGGTGGGGTGACTAGGGA 62.178 65.000 0.00 0.00 0.00 4.20
1479 5619 1.689582 GAGGGTGGGGTGACTAGGG 60.690 68.421 0.00 0.00 0.00 3.53
1480 5620 0.546747 TTGAGGGTGGGGTGACTAGG 60.547 60.000 0.00 0.00 0.00 3.02
1481 5621 0.613777 GTTGAGGGTGGGGTGACTAG 59.386 60.000 0.00 0.00 0.00 2.57
1482 5622 0.192566 AGTTGAGGGTGGGGTGACTA 59.807 55.000 0.00 0.00 0.00 2.59
1483 5623 0.697854 AAGTTGAGGGTGGGGTGACT 60.698 55.000 0.00 0.00 0.00 3.41
1484 5624 0.185175 AAAGTTGAGGGTGGGGTGAC 59.815 55.000 0.00 0.00 0.00 3.67
1485 5625 0.930726 AAAAGTTGAGGGTGGGGTGA 59.069 50.000 0.00 0.00 0.00 4.02
1486 5626 2.158519 AGTAAAAGTTGAGGGTGGGGTG 60.159 50.000 0.00 0.00 0.00 4.61
1487 5627 2.141067 AGTAAAAGTTGAGGGTGGGGT 58.859 47.619 0.00 0.00 0.00 4.95
1488 5628 2.107552 TCAGTAAAAGTTGAGGGTGGGG 59.892 50.000 0.00 0.00 0.00 4.96
1489 5629 3.146847 GTCAGTAAAAGTTGAGGGTGGG 58.853 50.000 0.00 0.00 0.00 4.61
1490 5630 4.086706 AGTCAGTAAAAGTTGAGGGTGG 57.913 45.455 0.00 0.00 0.00 4.61
1491 5631 6.015350 TCTCTAGTCAGTAAAAGTTGAGGGTG 60.015 42.308 0.00 0.00 0.00 4.61
1492 5632 6.015265 GTCTCTAGTCAGTAAAAGTTGAGGGT 60.015 42.308 0.00 0.00 0.00 4.34
1493 5633 6.209788 AGTCTCTAGTCAGTAAAAGTTGAGGG 59.790 42.308 0.00 0.00 0.00 4.30
1494 5634 7.222000 AGTCTCTAGTCAGTAAAAGTTGAGG 57.778 40.000 0.00 0.00 0.00 3.86
1495 5635 9.005777 ACTAGTCTCTAGTCAGTAAAAGTTGAG 57.994 37.037 3.91 0.00 0.00 3.02
1496 5636 8.921353 ACTAGTCTCTAGTCAGTAAAAGTTGA 57.079 34.615 3.91 0.00 0.00 3.18
1503 5643 9.473007 TGACTACTACTAGTCTCTAGTCAGTAA 57.527 37.037 21.95 9.07 46.53 2.24
1504 5644 8.902806 GTGACTACTACTAGTCTCTAGTCAGTA 58.097 40.741 24.28 13.91 46.53 2.74
1505 5645 7.147846 GGTGACTACTACTAGTCTCTAGTCAGT 60.148 44.444 24.28 13.61 46.53 3.41
1506 5646 7.069085 AGGTGACTACTACTAGTCTCTAGTCAG 59.931 44.444 24.28 13.34 46.53 3.51
1507 5647 6.896860 AGGTGACTACTACTAGTCTCTAGTCA 59.103 42.308 21.95 21.95 46.53 3.41
1508 5648 7.352079 AGGTGACTACTACTAGTCTCTAGTC 57.648 44.000 18.91 18.91 46.53 2.59
1509 5649 7.738437 AAGGTGACTACTACTAGTCTCTAGT 57.262 40.000 0.00 12.91 46.53 2.57
1510 5650 9.754382 CTAAAGGTGACTACTACTAGTCTCTAG 57.246 40.741 0.00 0.00 46.53 2.43
1511 5651 9.265862 ACTAAAGGTGACTACTACTAGTCTCTA 57.734 37.037 0.00 0.00 46.53 2.43
1512 5652 8.149631 ACTAAAGGTGACTACTACTAGTCTCT 57.850 38.462 0.00 5.95 46.53 3.10
1513 5653 8.040132 TGACTAAAGGTGACTACTACTAGTCTC 58.960 40.741 0.00 6.95 46.53 3.36
1514 5654 7.915930 TGACTAAAGGTGACTACTACTAGTCT 58.084 38.462 0.00 0.00 46.53 3.24
1515 5655 7.823799 ACTGACTAAAGGTGACTACTACTAGTC 59.176 40.741 0.00 3.34 46.56 2.59
1516 5656 7.688343 ACTGACTAAAGGTGACTACTACTAGT 58.312 38.462 0.00 0.00 42.68 2.57
1517 5657 9.664332 TTACTGACTAAAGGTGACTACTACTAG 57.336 37.037 0.00 0.00 42.68 2.57
1519 5659 8.791675 GTTTACTGACTAAAGGTGACTACTACT 58.208 37.037 0.00 0.00 42.68 2.57
1520 5660 8.026026 GGTTTACTGACTAAAGGTGACTACTAC 58.974 40.741 0.00 0.00 42.68 2.73
1521 5661 7.946776 AGGTTTACTGACTAAAGGTGACTACTA 59.053 37.037 0.00 0.00 42.68 1.82
1522 5662 6.781507 AGGTTTACTGACTAAAGGTGACTACT 59.218 38.462 0.00 0.00 42.68 2.57
1523 5663 6.990798 AGGTTTACTGACTAAAGGTGACTAC 58.009 40.000 0.00 0.00 42.68 2.73
1524 5664 6.210185 GGAGGTTTACTGACTAAAGGTGACTA 59.790 42.308 0.00 0.00 42.68 2.59
1526 5666 5.221581 TGGAGGTTTACTGACTAAAGGTGAC 60.222 44.000 0.00 0.00 0.00 3.67
1527 5667 4.903049 TGGAGGTTTACTGACTAAAGGTGA 59.097 41.667 0.00 0.00 0.00 4.02
1528 5668 5.223449 TGGAGGTTTACTGACTAAAGGTG 57.777 43.478 0.00 0.00 0.00 4.00
1529 5669 5.899631 TTGGAGGTTTACTGACTAAAGGT 57.100 39.130 0.00 0.00 0.00 3.50
1530 5670 6.017357 GTGTTTGGAGGTTTACTGACTAAAGG 60.017 42.308 0.00 0.00 0.00 3.11
1531 5671 6.017357 GGTGTTTGGAGGTTTACTGACTAAAG 60.017 42.308 0.00 0.00 0.00 1.85
1532 5672 5.824097 GGTGTTTGGAGGTTTACTGACTAAA 59.176 40.000 0.00 0.00 0.00 1.85
1533 5673 5.370679 GGTGTTTGGAGGTTTACTGACTAA 58.629 41.667 0.00 0.00 0.00 2.24
1534 5674 4.202388 GGGTGTTTGGAGGTTTACTGACTA 60.202 45.833 0.00 0.00 0.00 2.59
1535 5675 3.434596 GGGTGTTTGGAGGTTTACTGACT 60.435 47.826 0.00 0.00 0.00 3.41
1536 5676 2.882761 GGGTGTTTGGAGGTTTACTGAC 59.117 50.000 0.00 0.00 0.00 3.51
1537 5677 2.158579 GGGGTGTTTGGAGGTTTACTGA 60.159 50.000 0.00 0.00 0.00 3.41
1538 5678 2.158519 AGGGGTGTTTGGAGGTTTACTG 60.159 50.000 0.00 0.00 0.00 2.74
1539 5679 2.141067 AGGGGTGTTTGGAGGTTTACT 58.859 47.619 0.00 0.00 0.00 2.24
1540 5680 2.158579 TCAGGGGTGTTTGGAGGTTTAC 60.159 50.000 0.00 0.00 0.00 2.01
1541 5681 2.136863 TCAGGGGTGTTTGGAGGTTTA 58.863 47.619 0.00 0.00 0.00 2.01
1542 5682 0.930726 TCAGGGGTGTTTGGAGGTTT 59.069 50.000 0.00 0.00 0.00 3.27
1543 5683 0.185175 GTCAGGGGTGTTTGGAGGTT 59.815 55.000 0.00 0.00 0.00 3.50
1544 5684 0.697854 AGTCAGGGGTGTTTGGAGGT 60.698 55.000 0.00 0.00 0.00 3.85
1545 5685 0.478507 AAGTCAGGGGTGTTTGGAGG 59.521 55.000 0.00 0.00 0.00 4.30
1546 5686 2.364972 AAAGTCAGGGGTGTTTGGAG 57.635 50.000 0.00 0.00 0.00 3.86
1547 5687 2.838637 AAAAGTCAGGGGTGTTTGGA 57.161 45.000 0.00 0.00 0.00 3.53
1548 5688 3.317993 CAGTAAAAGTCAGGGGTGTTTGG 59.682 47.826 0.00 0.00 0.00 3.28
1549 5689 4.036380 GTCAGTAAAAGTCAGGGGTGTTTG 59.964 45.833 0.00 0.00 0.00 2.93
1550 5690 4.079958 AGTCAGTAAAAGTCAGGGGTGTTT 60.080 41.667 0.00 0.00 0.00 2.83
1551 5691 3.458487 AGTCAGTAAAAGTCAGGGGTGTT 59.542 43.478 0.00 0.00 0.00 3.32
1552 5692 3.046374 AGTCAGTAAAAGTCAGGGGTGT 58.954 45.455 0.00 0.00 0.00 4.16
1553 5693 3.771577 AGTCAGTAAAAGTCAGGGGTG 57.228 47.619 0.00 0.00 0.00 4.61
1554 5694 5.368816 ACTTTAGTCAGTAAAAGTCAGGGGT 59.631 40.000 0.00 0.00 40.96 4.95
1555 5695 5.866207 ACTTTAGTCAGTAAAAGTCAGGGG 58.134 41.667 0.00 0.00 40.96 4.79
1561 5701 4.912133 AGGGGGACTTTAGTCAGTAAAAGT 59.088 41.667 11.67 0.00 45.99 2.66
1562 5702 5.248705 AGAGGGGGACTTTAGTCAGTAAAAG 59.751 44.000 11.67 0.00 46.47 2.27
1563 5703 5.160386 AGAGGGGGACTTTAGTCAGTAAAA 58.840 41.667 11.67 0.00 46.47 1.52
1564 5704 4.759953 AGAGGGGGACTTTAGTCAGTAAA 58.240 43.478 11.67 0.00 46.47 2.01
1565 5705 4.045590 AGAGAGGGGGACTTTAGTCAGTAA 59.954 45.833 11.67 0.00 46.47 2.24
1566 5706 3.596956 AGAGAGGGGGACTTTAGTCAGTA 59.403 47.826 11.67 0.00 46.47 2.74
1567 5707 2.384029 AGAGAGGGGGACTTTAGTCAGT 59.616 50.000 11.67 0.00 46.47 3.41
1568 5708 3.028130 GAGAGAGGGGGACTTTAGTCAG 58.972 54.545 11.67 0.00 46.47 3.51
1569 5709 2.655407 AGAGAGAGGGGGACTTTAGTCA 59.345 50.000 11.67 0.00 46.47 3.41
1570 5710 3.391799 AGAGAGAGGGGGACTTTAGTC 57.608 52.381 1.18 1.18 44.04 2.59
1571 5711 3.856747 AAGAGAGAGGGGGACTTTAGT 57.143 47.619 0.00 0.00 0.00 2.24
1572 5712 4.780554 AGAAAAGAGAGAGGGGGACTTTAG 59.219 45.833 0.00 0.00 31.86 1.85
1573 5713 4.764491 AGAAAAGAGAGAGGGGGACTTTA 58.236 43.478 0.00 0.00 31.86 1.85
1574 5714 3.603697 AGAAAAGAGAGAGGGGGACTTT 58.396 45.455 0.00 0.00 33.18 2.66
1575 5715 3.283712 AGAAAAGAGAGAGGGGGACTT 57.716 47.619 0.00 0.00 0.00 3.01
1576 5716 4.421574 TTAGAAAAGAGAGAGGGGGACT 57.578 45.455 0.00 0.00 0.00 3.85
1577 5717 5.432645 CAATTAGAAAAGAGAGAGGGGGAC 58.567 45.833 0.00 0.00 0.00 4.46
1578 5718 4.475016 CCAATTAGAAAAGAGAGAGGGGGA 59.525 45.833 0.00 0.00 0.00 4.81
1579 5719 4.228438 ACCAATTAGAAAAGAGAGAGGGGG 59.772 45.833 0.00 0.00 0.00 5.40
1580 5720 5.189180 CACCAATTAGAAAAGAGAGAGGGG 58.811 45.833 0.00 0.00 0.00 4.79
1581 5721 5.810095 ACACCAATTAGAAAAGAGAGAGGG 58.190 41.667 0.00 0.00 0.00 4.30
1582 5722 6.348868 GCAACACCAATTAGAAAAGAGAGAGG 60.349 42.308 0.00 0.00 0.00 3.69
1583 5723 6.205464 TGCAACACCAATTAGAAAAGAGAGAG 59.795 38.462 0.00 0.00 0.00 3.20
1584 5724 6.017109 GTGCAACACCAATTAGAAAAGAGAGA 60.017 38.462 0.00 0.00 36.32 3.10
1585 5725 6.145535 GTGCAACACCAATTAGAAAAGAGAG 58.854 40.000 0.00 0.00 36.32 3.20
1586 5726 5.592282 TGTGCAACACCAATTAGAAAAGAGA 59.408 36.000 0.00 0.00 45.67 3.10
1587 5727 5.830912 TGTGCAACACCAATTAGAAAAGAG 58.169 37.500 0.00 0.00 45.67 2.85
1588 5728 5.843673 TGTGCAACACCAATTAGAAAAGA 57.156 34.783 0.00 0.00 45.67 2.52
1603 5743 8.795786 TCAGTATTAAATGTCTTTTGTGCAAC 57.204 30.769 0.00 0.00 37.35 4.17
1604 5744 8.845227 TCTCAGTATTAAATGTCTTTTGTGCAA 58.155 29.630 0.00 0.00 0.00 4.08
1605 5745 8.289618 GTCTCAGTATTAAATGTCTTTTGTGCA 58.710 33.333 0.00 0.00 0.00 4.57
1606 5746 8.289618 TGTCTCAGTATTAAATGTCTTTTGTGC 58.710 33.333 0.00 0.00 0.00 4.57
1619 5759 9.890629 AGTCAGCATTAAATGTCTCAGTATTAA 57.109 29.630 0.00 0.00 0.00 1.40
1621 5761 9.539825 CTAGTCAGCATTAAATGTCTCAGTATT 57.460 33.333 0.00 0.00 0.00 1.89
1622 5762 8.700051 ACTAGTCAGCATTAAATGTCTCAGTAT 58.300 33.333 0.00 0.00 0.00 2.12
1623 5763 8.067751 ACTAGTCAGCATTAAATGTCTCAGTA 57.932 34.615 0.00 0.00 0.00 2.74
1624 5764 6.940739 ACTAGTCAGCATTAAATGTCTCAGT 58.059 36.000 0.00 0.00 0.00 3.41
1625 5765 8.194104 ACTACTAGTCAGCATTAAATGTCTCAG 58.806 37.037 0.00 0.00 0.00 3.35
1626 5766 8.067751 ACTACTAGTCAGCATTAAATGTCTCA 57.932 34.615 0.00 0.00 0.00 3.27
1627 5767 9.672086 CTACTACTAGTCAGCATTAAATGTCTC 57.328 37.037 0.00 0.00 0.00 3.36
1628 5768 9.191479 ACTACTACTAGTCAGCATTAAATGTCT 57.809 33.333 0.00 0.00 0.00 3.41
1629 5769 9.453325 GACTACTACTAGTCAGCATTAAATGTC 57.547 37.037 0.00 0.00 45.92 3.06
1642 5782 6.208204 TGTTTGGAAGGTGACTACTACTAGTC 59.792 42.308 0.00 3.34 46.56 2.59
1643 5783 6.073314 TGTTTGGAAGGTGACTACTACTAGT 58.927 40.000 0.00 0.00 42.68 2.57
1644 5784 6.350277 CCTGTTTGGAAGGTGACTACTACTAG 60.350 46.154 0.00 0.00 42.68 2.57
1645 5785 5.479375 CCTGTTTGGAAGGTGACTACTACTA 59.521 44.000 0.00 0.00 42.68 1.82
1646 5786 4.283722 CCTGTTTGGAAGGTGACTACTACT 59.716 45.833 0.00 0.00 42.68 2.57
1647 5787 4.562963 CCCTGTTTGGAAGGTGACTACTAC 60.563 50.000 0.00 0.00 42.68 2.73
1648 5788 3.581332 CCCTGTTTGGAAGGTGACTACTA 59.419 47.826 0.00 0.00 42.68 1.82
1649 5789 2.372172 CCCTGTTTGGAAGGTGACTACT 59.628 50.000 0.00 0.00 42.68 2.57
1650 5790 2.105993 ACCCTGTTTGGAAGGTGACTAC 59.894 50.000 0.00 0.00 42.68 2.73
1651 5791 2.370849 GACCCTGTTTGGAAGGTGACTA 59.629 50.000 0.00 0.00 42.68 2.59
1653 5793 1.143073 AGACCCTGTTTGGAAGGTGAC 59.857 52.381 0.00 0.00 38.35 3.67
1654 5794 1.142870 CAGACCCTGTTTGGAAGGTGA 59.857 52.381 0.00 0.00 38.35 4.02
1655 5795 1.142870 TCAGACCCTGTTTGGAAGGTG 59.857 52.381 0.00 0.00 38.35 4.00
1656 5796 1.143073 GTCAGACCCTGTTTGGAAGGT 59.857 52.381 0.00 0.00 38.35 3.50
1657 5797 1.421646 AGTCAGACCCTGTTTGGAAGG 59.578 52.381 0.00 0.00 38.35 3.46
1658 5798 2.938956 AGTCAGACCCTGTTTGGAAG 57.061 50.000 0.00 0.00 38.35 3.46
1659 5799 4.781775 TTTAGTCAGACCCTGTTTGGAA 57.218 40.909 0.00 0.00 38.35 3.53
1660 5800 4.781775 TTTTAGTCAGACCCTGTTTGGA 57.218 40.909 0.00 0.00 38.35 3.53
1661 5801 4.887655 AGTTTTTAGTCAGACCCTGTTTGG 59.112 41.667 0.00 0.00 32.61 3.28
1662 5802 6.318900 AGAAGTTTTTAGTCAGACCCTGTTTG 59.681 38.462 0.00 0.00 32.61 2.93
1663 5803 6.424032 AGAAGTTTTTAGTCAGACCCTGTTT 58.576 36.000 0.00 0.00 32.61 2.83
1664 5804 6.002653 AGAAGTTTTTAGTCAGACCCTGTT 57.997 37.500 0.00 0.00 32.61 3.16
1665 5805 5.632034 AGAAGTTTTTAGTCAGACCCTGT 57.368 39.130 0.00 0.00 32.61 4.00
1666 5806 6.760291 ACTAGAAGTTTTTAGTCAGACCCTG 58.240 40.000 0.00 0.00 0.00 4.45
1667 5807 6.783482 AGACTAGAAGTTTTTAGTCAGACCCT 59.217 38.462 21.15 5.95 45.20 4.34
1668 5808 6.869388 CAGACTAGAAGTTTTTAGTCAGACCC 59.131 42.308 21.15 4.21 45.20 4.46
1669 5809 7.595875 GTCAGACTAGAAGTTTTTAGTCAGACC 59.404 40.741 24.69 15.82 46.58 3.85
1670 5810 8.510132 GTCAGACTAGAAGTTTTTAGTCAGAC 57.490 38.462 22.96 22.96 46.46 3.51
1671 5811 8.466617 AGTCAGACTAGAAGTTTTTAGTCAGA 57.533 34.615 21.15 17.72 45.20 3.27
1672 5812 9.615295 GTAGTCAGACTAGAAGTTTTTAGTCAG 57.385 37.037 21.15 16.38 45.20 3.51
1673 5813 9.352191 AGTAGTCAGACTAGAAGTTTTTAGTCA 57.648 33.333 21.15 7.40 45.20 3.41
1702 5842 7.138054 TGGATACTCTCTAGTCATGTGACTA 57.862 40.000 18.83 18.83 45.93 2.59
1704 5844 6.701145 TTGGATACTCTCTAGTCATGTGAC 57.299 41.667 5.01 5.01 40.95 3.67
1705 5845 6.663523 TGTTTGGATACTCTCTAGTCATGTGA 59.336 38.462 0.00 0.00 37.15 3.58
1706 5846 6.754209 GTGTTTGGATACTCTCTAGTCATGTG 59.246 42.308 0.00 0.00 37.15 3.21
1707 5847 6.127310 GGTGTTTGGATACTCTCTAGTCATGT 60.127 42.308 0.00 0.00 37.15 3.21
1708 5848 6.097554 AGGTGTTTGGATACTCTCTAGTCATG 59.902 42.308 0.00 0.00 37.15 3.07
1709 5849 6.198639 AGGTGTTTGGATACTCTCTAGTCAT 58.801 40.000 0.00 0.00 37.15 3.06
1710 5850 5.580998 AGGTGTTTGGATACTCTCTAGTCA 58.419 41.667 0.00 0.00 37.15 3.41
1711 5851 5.652891 TGAGGTGTTTGGATACTCTCTAGTC 59.347 44.000 0.00 0.00 37.15 2.59
1712 5852 5.580998 TGAGGTGTTTGGATACTCTCTAGT 58.419 41.667 0.00 0.00 39.91 2.57
1713 5853 6.723298 ATGAGGTGTTTGGATACTCTCTAG 57.277 41.667 0.00 0.00 37.61 2.43
1714 5854 8.004801 TCATATGAGGTGTTTGGATACTCTCTA 58.995 37.037 0.00 0.00 37.61 2.43
1715 5855 6.841229 TCATATGAGGTGTTTGGATACTCTCT 59.159 38.462 0.00 0.00 37.61 3.10
1716 5856 7.055667 TCATATGAGGTGTTTGGATACTCTC 57.944 40.000 0.00 0.00 37.61 3.20
1717 5857 7.290948 TGATCATATGAGGTGTTTGGATACTCT 59.709 37.037 11.78 0.00 37.61 3.24
1718 5858 7.445121 TGATCATATGAGGTGTTTGGATACTC 58.555 38.462 11.78 0.00 37.61 2.59
1719 5859 7.379059 TGATCATATGAGGTGTTTGGATACT 57.621 36.000 11.78 0.00 37.61 2.12
1720 5860 7.879677 TGATGATCATATGAGGTGTTTGGATAC 59.120 37.037 8.54 0.00 0.00 2.24
1721 5861 7.879677 GTGATGATCATATGAGGTGTTTGGATA 59.120 37.037 8.54 0.00 0.00 2.59
1722 5862 6.713903 GTGATGATCATATGAGGTGTTTGGAT 59.286 38.462 8.54 0.00 0.00 3.41
1723 5863 6.057533 GTGATGATCATATGAGGTGTTTGGA 58.942 40.000 8.54 0.00 0.00 3.53
1724 5864 5.824097 TGTGATGATCATATGAGGTGTTTGG 59.176 40.000 8.54 0.00 0.00 3.28
1725 5865 6.930667 TGTGATGATCATATGAGGTGTTTG 57.069 37.500 8.54 0.00 0.00 2.93
1726 5866 7.341030 TCTTGTGATGATCATATGAGGTGTTT 58.659 34.615 8.54 0.00 0.00 2.83
1727 5867 6.892485 TCTTGTGATGATCATATGAGGTGTT 58.108 36.000 8.54 0.00 0.00 3.32
1728 5868 6.490241 TCTTGTGATGATCATATGAGGTGT 57.510 37.500 8.54 0.00 0.00 4.16
1729 5869 7.981102 ATTCTTGTGATGATCATATGAGGTG 57.019 36.000 8.54 0.00 0.00 4.00
1730 5870 7.387122 CGAATTCTTGTGATGATCATATGAGGT 59.613 37.037 8.54 0.00 0.00 3.85
1731 5871 7.601508 TCGAATTCTTGTGATGATCATATGAGG 59.398 37.037 8.54 0.00 0.00 3.86
1732 5872 8.433893 GTCGAATTCTTGTGATGATCATATGAG 58.566 37.037 8.54 5.00 0.00 2.90
1733 5873 8.146412 AGTCGAATTCTTGTGATGATCATATGA 58.854 33.333 8.54 8.10 0.00 2.15
1734 5874 8.307921 AGTCGAATTCTTGTGATGATCATATG 57.692 34.615 8.54 0.00 0.00 1.78
1735 5875 9.987272 TTAGTCGAATTCTTGTGATGATCATAT 57.013 29.630 8.54 0.00 0.00 1.78
1736 5876 9.987272 ATTAGTCGAATTCTTGTGATGATCATA 57.013 29.630 8.54 0.00 0.00 2.15
1737 5877 8.771766 CATTAGTCGAATTCTTGTGATGATCAT 58.228 33.333 8.25 8.25 0.00 2.45
1749 5889 8.184304 ACCTCTATAAGCATTAGTCGAATTCT 57.816 34.615 3.52 0.00 31.76 2.40
1758 5916 5.071788 TCACCCCAACCTCTATAAGCATTAG 59.928 44.000 0.00 0.00 31.76 1.73
1760 5918 3.785887 TCACCCCAACCTCTATAAGCATT 59.214 43.478 0.00 0.00 0.00 3.56
1777 5935 2.206576 AAGGAATGTTGCTCTCACCC 57.793 50.000 0.00 0.00 0.00 4.61
1778 5936 4.590850 AAAAAGGAATGTTGCTCTCACC 57.409 40.909 0.00 0.00 0.00 4.02
1781 5939 4.522789 TGGGTAAAAAGGAATGTTGCTCTC 59.477 41.667 0.00 0.00 0.00 3.20
1794 5952 6.092259 GTCTACTGTACATGCTGGGTAAAAAG 59.908 42.308 0.00 0.00 0.00 2.27
1796 5954 5.012251 TGTCTACTGTACATGCTGGGTAAAA 59.988 40.000 0.00 0.00 0.00 1.52
1797 5955 4.528987 TGTCTACTGTACATGCTGGGTAAA 59.471 41.667 0.00 0.00 0.00 2.01
1798 5956 4.090819 TGTCTACTGTACATGCTGGGTAA 58.909 43.478 0.00 0.00 0.00 2.85
1799 5957 3.703921 TGTCTACTGTACATGCTGGGTA 58.296 45.455 0.00 0.00 0.00 3.69
1800 5958 2.536066 TGTCTACTGTACATGCTGGGT 58.464 47.619 0.00 0.00 0.00 4.51
1801 5959 3.461061 CATGTCTACTGTACATGCTGGG 58.539 50.000 9.93 0.00 45.43 4.45
1837 5995 3.611530 CGTGTCAAATTTGGGTGTGATCC 60.612 47.826 17.90 0.00 0.00 3.36
1859 6017 5.600908 TTTCGCCTTTATAAGTCACACAC 57.399 39.130 0.00 0.00 0.00 3.82
1861 6019 8.827677 AGAATATTTCGCCTTTATAAGTCACAC 58.172 33.333 0.00 0.00 34.02 3.82
1862 6020 8.958119 AGAATATTTCGCCTTTATAAGTCACA 57.042 30.769 0.00 0.00 34.02 3.58
1863 6021 9.865484 GAAGAATATTTCGCCTTTATAAGTCAC 57.135 33.333 0.00 0.00 34.02 3.67
1866 6024 8.560374 GCTGAAGAATATTTCGCCTTTATAAGT 58.440 33.333 0.00 0.00 34.02 2.24
1868 6026 7.307751 CCGCTGAAGAATATTTCGCCTTTATAA 60.308 37.037 0.00 0.00 34.02 0.98
1876 6034 2.210116 TCCCGCTGAAGAATATTTCGC 58.790 47.619 0.00 0.00 34.02 4.70
1879 6037 3.132289 TCGTCTCCCGCTGAAGAATATTT 59.868 43.478 0.00 0.00 36.19 1.40
1892 6050 3.058155 CACCTATAGAATGTCGTCTCCCG 60.058 52.174 0.00 0.00 38.13 5.14
1893 6051 3.305471 GCACCTATAGAATGTCGTCTCCC 60.305 52.174 0.00 0.00 0.00 4.30
1897 6055 5.183331 TCATAGGCACCTATAGAATGTCGTC 59.817 44.000 8.88 0.00 37.16 4.20
1899 6057 5.644977 TCATAGGCACCTATAGAATGTCG 57.355 43.478 8.88 0.00 37.16 4.35
1902 6060 7.180322 AGTCATCATAGGCACCTATAGAATG 57.820 40.000 8.88 12.22 37.16 2.67
1903 6061 7.805083 AAGTCATCATAGGCACCTATAGAAT 57.195 36.000 8.88 4.89 37.16 2.40
1905 6063 6.554982 ACAAAGTCATCATAGGCACCTATAGA 59.445 38.462 8.88 9.37 37.16 1.98
1915 6073 7.330454 CGGATAGATTGACAAAGTCATCATAGG 59.670 40.741 0.12 0.00 42.40 2.57
1917 6075 7.726216 ACGGATAGATTGACAAAGTCATCATA 58.274 34.615 0.12 0.00 42.40 2.15
1940 6098 3.181505 ACATTCGAGAGACTAAGCTGACG 60.182 47.826 0.00 0.00 41.84 4.35
1942 6100 5.186942 AGTACATTCGAGAGACTAAGCTGA 58.813 41.667 0.00 0.00 41.84 4.26
1963 6121 4.224370 CACACATACCCTACCCTTACAAGT 59.776 45.833 0.00 0.00 0.00 3.16
1971 6129 1.134491 GCACTCACACATACCCTACCC 60.134 57.143 0.00 0.00 0.00 3.69
1977 6135 4.512944 CCTATGAATGCACTCACACATACC 59.487 45.833 0.00 0.00 0.00 2.73
1983 6141 2.195727 TCCCCTATGAATGCACTCACA 58.804 47.619 0.00 0.00 0.00 3.58
1988 6146 1.145738 ACCCATCCCCTATGAATGCAC 59.854 52.381 0.00 0.00 37.86 4.57
1991 6149 4.043310 ACATACACCCATCCCCTATGAATG 59.957 45.833 0.00 0.00 37.86 2.67
1992 6150 4.251169 ACATACACCCATCCCCTATGAAT 58.749 43.478 0.00 0.00 37.86 2.57
1999 6157 2.404559 TCTGTACATACACCCATCCCC 58.595 52.381 0.00 0.00 31.93 4.81
2053 6220 7.154656 TGTCTCGAATCCCAAATCATGTATAG 58.845 38.462 0.00 0.00 0.00 1.31
2055 6222 5.928976 TGTCTCGAATCCCAAATCATGTAT 58.071 37.500 0.00 0.00 0.00 2.29
2057 6224 4.220693 TGTCTCGAATCCCAAATCATGT 57.779 40.909 0.00 0.00 0.00 3.21
2059 6226 5.760253 GTGTATGTCTCGAATCCCAAATCAT 59.240 40.000 0.00 0.00 0.00 2.45
2062 6229 5.097742 TGTGTATGTCTCGAATCCCAAAT 57.902 39.130 0.00 0.00 0.00 2.32
2108 6275 6.571925 GCTCTGGAAATTGCAAGAGAAAGATT 60.572 38.462 20.79 0.00 0.00 2.40
2109 6276 5.105837 GCTCTGGAAATTGCAAGAGAAAGAT 60.106 40.000 20.79 0.00 0.00 2.40
2110 6277 4.217118 GCTCTGGAAATTGCAAGAGAAAGA 59.783 41.667 20.79 8.82 0.00 2.52
2111 6278 4.217983 AGCTCTGGAAATTGCAAGAGAAAG 59.782 41.667 20.79 5.22 0.00 2.62
2112 6279 4.147321 AGCTCTGGAAATTGCAAGAGAAA 58.853 39.130 20.79 0.00 0.00 2.52
2113 6280 3.755378 GAGCTCTGGAAATTGCAAGAGAA 59.245 43.478 20.79 0.00 0.00 2.87
2114 6281 3.008813 AGAGCTCTGGAAATTGCAAGAGA 59.991 43.478 20.79 0.88 0.00 3.10
2115 6282 3.345414 AGAGCTCTGGAAATTGCAAGAG 58.655 45.455 17.42 13.12 0.00 2.85
2116 6283 3.341823 GAGAGCTCTGGAAATTGCAAGA 58.658 45.455 23.91 0.00 0.00 3.02
2117 6284 2.095532 CGAGAGCTCTGGAAATTGCAAG 59.904 50.000 23.91 0.00 0.00 4.01
2118 6285 2.079158 CGAGAGCTCTGGAAATTGCAA 58.921 47.619 23.91 0.00 0.00 4.08
2119 6286 1.002430 ACGAGAGCTCTGGAAATTGCA 59.998 47.619 29.80 0.00 0.00 4.08
2120 6287 1.731720 ACGAGAGCTCTGGAAATTGC 58.268 50.000 29.80 8.61 0.00 3.56
2121 6288 2.346847 CGAACGAGAGCTCTGGAAATTG 59.653 50.000 29.80 15.57 0.00 2.32
2122 6289 2.028930 ACGAACGAGAGCTCTGGAAATT 60.029 45.455 29.80 15.17 0.00 1.82
2123 6290 1.546476 ACGAACGAGAGCTCTGGAAAT 59.454 47.619 29.80 16.03 0.00 2.17
2124 6291 0.959553 ACGAACGAGAGCTCTGGAAA 59.040 50.000 29.80 0.00 0.00 3.13
2125 6292 0.959553 AACGAACGAGAGCTCTGGAA 59.040 50.000 29.80 0.00 0.00 3.53
2126 6293 1.817357 TAACGAACGAGAGCTCTGGA 58.183 50.000 29.80 5.63 0.00 3.86
2127 6294 2.159366 ACATAACGAACGAGAGCTCTGG 60.159 50.000 23.91 23.21 0.00 3.86
2128 6295 3.102276 GACATAACGAACGAGAGCTCTG 58.898 50.000 23.91 15.72 0.00 3.35
2129 6296 3.011119 AGACATAACGAACGAGAGCTCT 58.989 45.455 18.28 18.28 0.00 4.09
2130 6297 3.181509 TGAGACATAACGAACGAGAGCTC 60.182 47.826 5.27 5.27 0.00 4.09
2131 6298 2.747989 TGAGACATAACGAACGAGAGCT 59.252 45.455 0.14 0.00 0.00 4.09
2132 6299 3.132629 TGAGACATAACGAACGAGAGC 57.867 47.619 0.14 0.00 0.00 4.09
2133 6300 3.544285 GCTTGAGACATAACGAACGAGAG 59.456 47.826 0.14 0.00 0.00 3.20
2134 6301 3.057806 TGCTTGAGACATAACGAACGAGA 60.058 43.478 0.14 0.00 0.00 4.04
2135 6302 3.242518 TGCTTGAGACATAACGAACGAG 58.757 45.455 0.14 0.00 0.00 4.18
2136 6303 3.291809 TGCTTGAGACATAACGAACGA 57.708 42.857 0.14 0.00 0.00 3.85
2137 6304 3.722082 GCTTGCTTGAGACATAACGAACG 60.722 47.826 0.00 0.00 0.00 3.95
2138 6305 3.186409 TGCTTGCTTGAGACATAACGAAC 59.814 43.478 0.00 0.00 0.00 3.95
2139 6306 3.186409 GTGCTTGCTTGAGACATAACGAA 59.814 43.478 0.00 0.00 0.00 3.85
2140 6307 2.736721 GTGCTTGCTTGAGACATAACGA 59.263 45.455 0.00 0.00 0.00 3.85
2141 6308 2.738846 AGTGCTTGCTTGAGACATAACG 59.261 45.455 0.00 0.00 0.00 3.18
2142 6309 4.932200 AGTAGTGCTTGCTTGAGACATAAC 59.068 41.667 0.00 0.00 0.00 1.89
2143 6310 5.152623 AGTAGTGCTTGCTTGAGACATAA 57.847 39.130 0.00 0.00 0.00 1.90
2144 6311 4.808414 AGTAGTGCTTGCTTGAGACATA 57.192 40.909 0.00 0.00 0.00 2.29
2145 6312 3.692257 AGTAGTGCTTGCTTGAGACAT 57.308 42.857 0.00 0.00 0.00 3.06
2146 6313 3.056536 CCTAGTAGTGCTTGCTTGAGACA 60.057 47.826 0.00 0.00 0.00 3.41
2147 6314 3.193691 TCCTAGTAGTGCTTGCTTGAGAC 59.806 47.826 0.00 0.00 0.00 3.36
2148 6315 3.431415 TCCTAGTAGTGCTTGCTTGAGA 58.569 45.455 0.00 0.00 0.00 3.27
2149 6316 3.876274 TCCTAGTAGTGCTTGCTTGAG 57.124 47.619 0.00 0.00 0.00 3.02
2150 6317 4.617253 TTTCCTAGTAGTGCTTGCTTGA 57.383 40.909 0.00 0.00 0.00 3.02
2151 6318 5.163713 GGATTTTCCTAGTAGTGCTTGCTTG 60.164 44.000 0.00 0.00 32.53 4.01
2152 6319 4.944317 GGATTTTCCTAGTAGTGCTTGCTT 59.056 41.667 0.00 0.00 32.53 3.91
2153 6320 4.518249 GGATTTTCCTAGTAGTGCTTGCT 58.482 43.478 0.00 0.00 32.53 3.91
2154 6321 4.884458 GGATTTTCCTAGTAGTGCTTGC 57.116 45.455 0.00 0.00 32.53 4.01
2164 6331 7.256225 AGGTAACGGCTATAAGGATTTTCCTAG 60.256 40.741 0.00 0.00 45.65 3.02
2165 6332 6.556116 AGGTAACGGCTATAAGGATTTTCCTA 59.444 38.462 0.00 0.00 45.65 2.94
2167 6334 5.618236 AGGTAACGGCTATAAGGATTTTCC 58.382 41.667 0.00 0.00 46.39 3.13
2168 6335 7.172190 GGTAAGGTAACGGCTATAAGGATTTTC 59.828 40.741 0.00 0.00 46.39 2.29
2169 6336 6.994496 GGTAAGGTAACGGCTATAAGGATTTT 59.006 38.462 0.00 0.00 46.39 1.82
2170 6337 6.464892 GGGTAAGGTAACGGCTATAAGGATTT 60.465 42.308 0.00 0.00 46.39 2.17
2171 6338 5.012458 GGGTAAGGTAACGGCTATAAGGATT 59.988 44.000 0.00 0.00 46.39 3.01
2172 6339 4.529769 GGGTAAGGTAACGGCTATAAGGAT 59.470 45.833 0.00 0.00 46.39 3.24
2173 6340 3.897505 GGGTAAGGTAACGGCTATAAGGA 59.102 47.826 0.00 0.00 46.39 3.36
2174 6341 3.007290 GGGGTAAGGTAACGGCTATAAGG 59.993 52.174 0.00 0.00 46.39 2.69
2175 6342 3.007290 GGGGGTAAGGTAACGGCTATAAG 59.993 52.174 0.00 0.00 46.39 1.73
2176 6343 2.972021 GGGGGTAAGGTAACGGCTATAA 59.028 50.000 0.00 0.00 46.39 0.98
2177 6344 2.090831 TGGGGGTAAGGTAACGGCTATA 60.091 50.000 0.00 0.00 46.39 1.31
2178 6345 1.344291 TGGGGGTAAGGTAACGGCTAT 60.344 52.381 0.00 0.00 46.39 2.97
2179 6346 0.042431 TGGGGGTAAGGTAACGGCTA 59.958 55.000 0.00 0.00 46.39 3.93
2180 6347 0.841594 TTGGGGGTAAGGTAACGGCT 60.842 55.000 0.00 0.00 46.39 5.52
2181 6348 0.038021 TTTGGGGGTAAGGTAACGGC 59.962 55.000 0.00 0.00 46.39 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.