Multiple sequence alignment - TraesCS6B01G106400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G106400 chr6B 100.000 3709 0 0 1 3709 86674155 86670447 0.000000e+00 6850.0
1 TraesCS6B01G106400 chr6B 96.670 2042 51 6 1000 3038 86447165 86445138 0.000000e+00 3378.0
2 TraesCS6B01G106400 chr6B 95.585 1812 72 3 1118 2929 86647184 86648987 0.000000e+00 2896.0
3 TraesCS6B01G106400 chr6B 97.140 944 27 0 1 944 101197590 101198533 0.000000e+00 1594.0
4 TraesCS6B01G106400 chr6B 88.525 1037 90 10 1636 2658 87331036 87330015 0.000000e+00 1229.0
5 TraesCS6B01G106400 chr6B 92.410 527 36 4 1005 1530 87331586 87331063 0.000000e+00 749.0
6 TraesCS6B01G106400 chr6B 95.671 231 9 1 3040 3269 301609632 301609862 1.630000e-98 370.0
7 TraesCS6B01G106400 chr6B 95.604 182 7 1 945 1126 86646122 86646302 1.300000e-74 291.0
8 TraesCS6B01G106400 chr6B 98.077 52 1 0 3291 3342 86445114 86445063 1.420000e-14 91.6
9 TraesCS6B01G106400 chr6D 92.342 1998 104 20 1003 2977 37118006 37116035 0.000000e+00 2796.0
10 TraesCS6B01G106400 chr6D 90.039 1014 70 15 1787 2792 37226543 37225553 0.000000e+00 1284.0
11 TraesCS6B01G106400 chr6D 90.886 801 57 10 1000 1792 37229162 37228370 0.000000e+00 1061.0
12 TraesCS6B01G106400 chr6D 91.931 347 25 2 1000 1344 37337733 37337388 2.000000e-132 483.0
13 TraesCS6B01G106400 chr6A 92.099 1658 107 16 1009 2655 48641956 48640312 0.000000e+00 2314.0
14 TraesCS6B01G106400 chr6A 96.610 944 32 0 1 944 84055833 84054890 0.000000e+00 1567.0
15 TraesCS6B01G106400 chr4B 97.246 944 25 1 1 944 587766650 587765708 0.000000e+00 1598.0
16 TraesCS6B01G106400 chr1B 97.046 948 27 1 1 947 508703243 508704190 0.000000e+00 1594.0
17 TraesCS6B01G106400 chr1B 97.140 944 26 1 1 944 642643798 642642856 0.000000e+00 1592.0
18 TraesCS6B01G106400 chr1B 96.398 944 30 2 1 944 538729643 538730582 0.000000e+00 1552.0
19 TraesCS6B01G106400 chr1B 79.749 1511 234 50 1145 2644 478560671 478562120 0.000000e+00 1029.0
20 TraesCS6B01G106400 chr2B 96.504 944 33 0 1 944 768031542 768030599 0.000000e+00 1561.0
21 TraesCS6B01G106400 chr2B 98.113 53 1 0 945 997 253271734 253271786 3.940000e-15 93.5
22 TraesCS6B01G106400 chr2B 96.226 53 2 0 945 997 117879673 117879725 1.840000e-13 87.9
23 TraesCS6B01G106400 chr5A 96.414 948 31 2 1 948 698883891 698882947 0.000000e+00 1559.0
24 TraesCS6B01G106400 chr5A 79.035 1493 231 59 1161 2644 617097302 617095883 0.000000e+00 948.0
25 TraesCS6B01G106400 chr5A 78.476 1496 234 63 1161 2644 617123656 617122237 0.000000e+00 898.0
26 TraesCS6B01G106400 chr4A 96.292 944 33 1 1 944 292831655 292832596 0.000000e+00 1548.0
27 TraesCS6B01G106400 chr4A 79.039 1498 231 55 1161 2644 713605992 713604564 0.000000e+00 950.0
28 TraesCS6B01G106400 chr4A 92.140 229 17 1 3043 3270 66037365 66037137 4.620000e-84 322.0
29 TraesCS6B01G106400 chr1A 80.040 1508 234 45 1145 2643 456243404 456244853 0.000000e+00 1055.0
30 TraesCS6B01G106400 chr1A 96.226 53 2 0 945 997 281365257 281365205 1.840000e-13 87.9
31 TraesCS6B01G106400 chr1D 79.947 1501 224 51 1158 2644 355668410 355669847 0.000000e+00 1033.0
32 TraesCS6B01G106400 chr1D 96.154 52 2 0 946 997 325680852 325680903 6.600000e-13 86.1
33 TraesCS6B01G106400 chr5B 79.303 1493 227 55 1161 2644 610107913 610106494 0.000000e+00 970.0
34 TraesCS6B01G106400 chr5B 79.021 1492 233 55 1161 2644 610282401 610280982 0.000000e+00 948.0
35 TraesCS6B01G106400 chr5B 78.366 1493 241 55 1161 2644 610205892 610204473 0.000000e+00 893.0
36 TraesCS6B01G106400 chr5B 77.910 1512 221 69 1145 2633 684085187 684086608 0.000000e+00 837.0
37 TraesCS6B01G106400 chr5B 89.516 372 34 3 3342 3709 503309389 503309759 2.020000e-127 466.0
38 TraesCS6B01G106400 chr5B 88.950 362 38 2 3343 3702 483004854 483004493 2.630000e-121 446.0
39 TraesCS6B01G106400 chr7D 78.786 1499 214 60 1155 2639 19399650 19401058 0.000000e+00 911.0
40 TraesCS6B01G106400 chr7D 78.279 976 160 36 1694 2636 123157318 123158274 6.900000e-162 580.0
41 TraesCS6B01G106400 chr7D 85.488 379 35 4 3350 3709 572414925 572414548 9.720000e-101 377.0
42 TraesCS6B01G106400 chr7D 85.224 379 36 3 3350 3709 572438872 572439249 4.520000e-99 372.0
43 TraesCS6B01G106400 chr7D 84.973 366 36 5 3350 3696 17218335 17217970 1.640000e-93 353.0
44 TraesCS6B01G106400 chr7D 80.702 228 27 4 3042 3269 164403936 164404146 1.070000e-35 161.0
45 TraesCS6B01G106400 chr3B 87.332 371 38 9 3343 3709 777197501 777197866 2.060000e-112 416.0
46 TraesCS6B01G106400 chr7B 86.179 369 49 2 3343 3709 620601511 620601879 7.460000e-107 398.0
47 TraesCS6B01G106400 chr7B 83.516 364 54 5 3350 3709 173065572 173065933 5.940000e-88 335.0
48 TraesCS6B01G106400 chrUn 85.596 361 49 3 3350 3709 468948075 468948433 3.500000e-100 375.0
49 TraesCS6B01G106400 chr4D 84.197 386 42 5 3343 3709 13211920 13212305 1.270000e-94 357.0
50 TraesCS6B01G106400 chr3D 88.040 301 35 1 3343 3642 179219347 179219647 4.560000e-94 355.0
51 TraesCS6B01G106400 chr3A 96.154 52 2 0 945 996 597118737 597118686 6.600000e-13 86.1
52 TraesCS6B01G106400 chr2A 94.340 53 3 0 945 997 28681711 28681659 8.540000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G106400 chr6B 86670447 86674155 3708 True 6850.0 6850 100.0000 1 3709 1 chr6B.!!$R1 3708
1 TraesCS6B01G106400 chr6B 86445063 86447165 2102 True 1734.8 3378 97.3735 1000 3342 2 chr6B.!!$R2 2342
2 TraesCS6B01G106400 chr6B 101197590 101198533 943 False 1594.0 1594 97.1400 1 944 1 chr6B.!!$F1 943
3 TraesCS6B01G106400 chr6B 86646122 86648987 2865 False 1593.5 2896 95.5945 945 2929 2 chr6B.!!$F3 1984
4 TraesCS6B01G106400 chr6B 87330015 87331586 1571 True 989.0 1229 90.4675 1005 2658 2 chr6B.!!$R3 1653
5 TraesCS6B01G106400 chr6D 37116035 37118006 1971 True 2796.0 2796 92.3420 1003 2977 1 chr6D.!!$R1 1974
6 TraesCS6B01G106400 chr6D 37225553 37229162 3609 True 1172.5 1284 90.4625 1000 2792 2 chr6D.!!$R3 1792
7 TraesCS6B01G106400 chr6A 48640312 48641956 1644 True 2314.0 2314 92.0990 1009 2655 1 chr6A.!!$R1 1646
8 TraesCS6B01G106400 chr6A 84054890 84055833 943 True 1567.0 1567 96.6100 1 944 1 chr6A.!!$R2 943
9 TraesCS6B01G106400 chr4B 587765708 587766650 942 True 1598.0 1598 97.2460 1 944 1 chr4B.!!$R1 943
10 TraesCS6B01G106400 chr1B 508703243 508704190 947 False 1594.0 1594 97.0460 1 947 1 chr1B.!!$F2 946
11 TraesCS6B01G106400 chr1B 642642856 642643798 942 True 1592.0 1592 97.1400 1 944 1 chr1B.!!$R1 943
12 TraesCS6B01G106400 chr1B 538729643 538730582 939 False 1552.0 1552 96.3980 1 944 1 chr1B.!!$F3 943
13 TraesCS6B01G106400 chr1B 478560671 478562120 1449 False 1029.0 1029 79.7490 1145 2644 1 chr1B.!!$F1 1499
14 TraesCS6B01G106400 chr2B 768030599 768031542 943 True 1561.0 1561 96.5040 1 944 1 chr2B.!!$R1 943
15 TraesCS6B01G106400 chr5A 698882947 698883891 944 True 1559.0 1559 96.4140 1 948 1 chr5A.!!$R3 947
16 TraesCS6B01G106400 chr5A 617095883 617097302 1419 True 948.0 948 79.0350 1161 2644 1 chr5A.!!$R1 1483
17 TraesCS6B01G106400 chr5A 617122237 617123656 1419 True 898.0 898 78.4760 1161 2644 1 chr5A.!!$R2 1483
18 TraesCS6B01G106400 chr4A 292831655 292832596 941 False 1548.0 1548 96.2920 1 944 1 chr4A.!!$F1 943
19 TraesCS6B01G106400 chr4A 713604564 713605992 1428 True 950.0 950 79.0390 1161 2644 1 chr4A.!!$R2 1483
20 TraesCS6B01G106400 chr1A 456243404 456244853 1449 False 1055.0 1055 80.0400 1145 2643 1 chr1A.!!$F1 1498
21 TraesCS6B01G106400 chr1D 355668410 355669847 1437 False 1033.0 1033 79.9470 1158 2644 1 chr1D.!!$F2 1486
22 TraesCS6B01G106400 chr5B 610106494 610107913 1419 True 970.0 970 79.3030 1161 2644 1 chr5B.!!$R2 1483
23 TraesCS6B01G106400 chr5B 610280982 610282401 1419 True 948.0 948 79.0210 1161 2644 1 chr5B.!!$R4 1483
24 TraesCS6B01G106400 chr5B 610204473 610205892 1419 True 893.0 893 78.3660 1161 2644 1 chr5B.!!$R3 1483
25 TraesCS6B01G106400 chr5B 684085187 684086608 1421 False 837.0 837 77.9100 1145 2633 1 chr5B.!!$F2 1488
26 TraesCS6B01G106400 chr7D 19399650 19401058 1408 False 911.0 911 78.7860 1155 2639 1 chr7D.!!$F1 1484
27 TraesCS6B01G106400 chr7D 123157318 123158274 956 False 580.0 580 78.2790 1694 2636 1 chr7D.!!$F2 942

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
146 147 0.104120 CGGATGCCACGGAGTATCAA 59.896 55.0 7.20 0.0 41.61 2.57 F
789 790 0.392193 CAGGCGCAATCTCAACCTCT 60.392 55.0 10.83 0.0 0.00 3.69 F
1986 4783 0.531974 AACACGAAGGCACACGTCAT 60.532 50.0 0.00 0.0 40.78 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1392 2313 1.229951 AGGTTCTCCATGCCTGGGA 60.230 57.895 8.28 1.90 43.34 4.37 R
2394 5229 0.037303 CTGACACCCACCTTGAGCAT 59.963 55.000 0.00 0.00 0.00 3.79 R
3228 6082 0.028242 CAGTTTGCCACGCGTAAACA 59.972 50.000 28.18 18.06 46.22 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 0.449388 GTGCTGGTATGCTCAAGTGC 59.551 55.000 0.00 0.00 0.00 4.40
134 135 2.431057 TCCTCTTTCTTCTACGGATGCC 59.569 50.000 0.00 0.00 0.00 4.40
146 147 0.104120 CGGATGCCACGGAGTATCAA 59.896 55.000 7.20 0.00 41.61 2.57
259 260 1.919956 GATGTGCACTGGTCTGCTGC 61.920 60.000 19.41 0.00 38.07 5.25
453 454 2.253452 CACGCAAGCAAGCCACTC 59.747 61.111 0.00 0.00 45.62 3.51
464 465 0.394565 AAGCCACTCTTTCTCGCAGT 59.605 50.000 0.00 0.00 0.00 4.40
660 661 9.399797 AGCACATTGAGATTGACTATCATTTTA 57.600 29.630 0.00 0.00 35.59 1.52
717 718 8.555729 AGATCAAGTTTATCTCCTCAAAGGATT 58.444 33.333 0.00 0.00 44.81 3.01
770 771 1.003580 TCTCCCATGTTTGAGGTCTGC 59.996 52.381 0.00 0.00 0.00 4.26
789 790 0.392193 CAGGCGCAATCTCAACCTCT 60.392 55.000 10.83 0.00 0.00 3.69
930 931 1.067060 GTTGAGCCACTTCCCACAAAC 59.933 52.381 0.00 0.00 0.00 2.93
944 945 4.776837 TCCCACAAACCCTACGTCTAATAA 59.223 41.667 0.00 0.00 0.00 1.40
987 988 8.477256 CAGATTTTAAGAATGGGCCAAATAAGA 58.523 33.333 11.89 3.63 0.00 2.10
992 993 9.665719 TTTAAGAATGGGCCAAATAAGAAATTC 57.334 29.630 11.89 6.45 0.00 2.17
1143 2057 1.449353 CTACCAGGGATGAGCAGCC 59.551 63.158 0.00 0.00 35.80 4.85
1613 2535 4.600576 TCGGCAGCAGCGTGTTCA 62.601 61.111 0.00 0.00 43.41 3.18
1986 4783 0.531974 AACACGAAGGCACACGTCAT 60.532 50.000 0.00 0.00 40.78 3.06
2007 4804 4.988598 CGACTGCCTGCGGTGGTT 62.989 66.667 8.61 0.00 35.39 3.67
2008 4805 3.357079 GACTGCCTGCGGTGGTTG 61.357 66.667 8.61 0.00 35.39 3.77
2009 4806 4.954970 ACTGCCTGCGGTGGTTGG 62.955 66.667 2.13 0.00 33.73 3.77
2010 4807 4.641645 CTGCCTGCGGTGGTTGGA 62.642 66.667 0.00 0.00 0.00 3.53
2011 4808 4.947147 TGCCTGCGGTGGTTGGAC 62.947 66.667 0.00 0.00 0.00 4.02
2013 4810 3.953775 CCTGCGGTGGTTGGACCT 61.954 66.667 0.00 0.00 39.58 3.85
2130 4927 0.979665 CCTCTCTGGCAAGGACTTCA 59.020 55.000 0.00 0.00 34.35 3.02
2616 5463 3.377656 ACGTCGGAAGGCTGATGT 58.622 55.556 0.00 0.00 43.23 3.06
2658 5505 1.000019 TCCGGAGAAGTCACCCGAT 60.000 57.895 0.00 0.00 45.58 4.18
2673 5520 2.791927 GATCGGCGAGTTTTGGCC 59.208 61.111 17.22 0.00 44.07 5.36
2836 5685 0.669318 CGTGGCATGTTGTAGGTCGT 60.669 55.000 0.00 0.00 0.00 4.34
2869 5718 0.108396 TGCTGCCAGAAGTGTTGCTA 59.892 50.000 0.00 0.00 0.00 3.49
2978 5832 1.711060 CCGTGGCGTCTCTCTCTCTC 61.711 65.000 0.00 0.00 0.00 3.20
2979 5833 0.742990 CGTGGCGTCTCTCTCTCTCT 60.743 60.000 0.00 0.00 0.00 3.10
2981 5835 0.908910 TGGCGTCTCTCTCTCTCTCT 59.091 55.000 0.00 0.00 0.00 3.10
2982 5836 1.280710 TGGCGTCTCTCTCTCTCTCTT 59.719 52.381 0.00 0.00 0.00 2.85
2983 5837 2.502130 TGGCGTCTCTCTCTCTCTCTTA 59.498 50.000 0.00 0.00 0.00 2.10
2984 5838 2.870411 GGCGTCTCTCTCTCTCTCTTAC 59.130 54.545 0.00 0.00 0.00 2.34
2985 5839 2.538449 GCGTCTCTCTCTCTCTCTTACG 59.462 54.545 0.00 0.00 0.00 3.18
3030 5884 1.063654 ACGGAAAACTCCAAGGGGGA 61.064 55.000 0.00 0.00 45.89 4.81
3031 5885 0.608308 CGGAAAACTCCAAGGGGGAC 60.608 60.000 0.00 0.00 42.15 4.46
3032 5886 0.481128 GGAAAACTCCAAGGGGGACA 59.519 55.000 0.00 0.00 42.15 4.02
3033 5887 1.077169 GGAAAACTCCAAGGGGGACAT 59.923 52.381 0.00 0.00 42.15 3.06
3034 5888 2.310647 GGAAAACTCCAAGGGGGACATA 59.689 50.000 0.00 0.00 42.15 2.29
3035 5889 3.621558 GAAAACTCCAAGGGGGACATAG 58.378 50.000 0.00 0.00 42.15 2.23
3036 5890 0.919710 AACTCCAAGGGGGACATAGC 59.080 55.000 0.00 0.00 42.15 2.97
3037 5891 1.338136 ACTCCAAGGGGGACATAGCG 61.338 60.000 0.00 0.00 42.15 4.26
3038 5892 1.002403 TCCAAGGGGGACATAGCGA 59.998 57.895 0.00 0.00 42.15 4.93
3039 5893 1.048724 TCCAAGGGGGACATAGCGAG 61.049 60.000 0.00 0.00 42.15 5.03
3040 5894 1.447643 CAAGGGGGACATAGCGAGG 59.552 63.158 0.00 0.00 0.00 4.63
3041 5895 2.444256 AAGGGGGACATAGCGAGGC 61.444 63.158 0.00 0.00 0.00 4.70
3042 5896 2.844839 GGGGGACATAGCGAGGCT 60.845 66.667 0.00 0.00 43.41 4.58
3043 5897 2.423446 GGGGACATAGCGAGGCTG 59.577 66.667 0.00 0.00 40.10 4.85
3044 5898 2.435693 GGGGACATAGCGAGGCTGT 61.436 63.158 0.00 0.00 40.10 4.40
3045 5899 1.522569 GGGACATAGCGAGGCTGTT 59.477 57.895 0.00 0.00 40.10 3.16
3046 5900 0.107654 GGGACATAGCGAGGCTGTTT 60.108 55.000 0.00 0.00 40.10 2.83
3047 5901 1.009829 GGACATAGCGAGGCTGTTTG 58.990 55.000 0.00 0.00 40.10 2.93
3048 5902 1.009829 GACATAGCGAGGCTGTTTGG 58.990 55.000 0.00 0.00 40.10 3.28
3049 5903 0.324943 ACATAGCGAGGCTGTTTGGT 59.675 50.000 0.00 0.00 40.10 3.67
3050 5904 1.271379 ACATAGCGAGGCTGTTTGGTT 60.271 47.619 0.00 0.00 40.10 3.67
3051 5905 1.131126 CATAGCGAGGCTGTTTGGTTG 59.869 52.381 0.00 0.00 40.10 3.77
3052 5906 1.234615 TAGCGAGGCTGTTTGGTTGC 61.235 55.000 0.00 0.00 40.10 4.17
3053 5907 2.644992 CGAGGCTGTTTGGTTGCC 59.355 61.111 0.00 0.00 46.42 4.52
3056 5910 2.421314 GGCTGTTTGGTTGCCACC 59.579 61.111 0.00 0.00 45.46 4.61
3057 5911 2.133641 GGCTGTTTGGTTGCCACCT 61.134 57.895 8.65 0.00 44.61 4.00
3058 5912 1.685355 GGCTGTTTGGTTGCCACCTT 61.685 55.000 8.65 0.00 44.61 3.50
3059 5913 1.036707 GCTGTTTGGTTGCCACCTTA 58.963 50.000 8.65 0.00 44.61 2.69
3060 5914 1.000274 GCTGTTTGGTTGCCACCTTAG 60.000 52.381 8.65 2.82 44.61 2.18
3061 5915 1.000274 CTGTTTGGTTGCCACCTTAGC 60.000 52.381 8.65 0.00 44.61 3.09
3062 5916 1.328279 GTTTGGTTGCCACCTTAGCT 58.672 50.000 8.65 0.00 44.61 3.32
3063 5917 2.158593 TGTTTGGTTGCCACCTTAGCTA 60.159 45.455 8.65 0.00 44.61 3.32
3064 5918 2.488153 GTTTGGTTGCCACCTTAGCTAG 59.512 50.000 8.65 0.00 44.61 3.42
3065 5919 0.035439 TGGTTGCCACCTTAGCTAGC 60.035 55.000 6.62 6.62 44.61 3.42
3066 5920 0.748367 GGTTGCCACCTTAGCTAGCC 60.748 60.000 12.13 0.00 40.44 3.93
3067 5921 0.035439 GTTGCCACCTTAGCTAGCCA 60.035 55.000 12.13 0.00 0.00 4.75
3068 5922 0.918983 TTGCCACCTTAGCTAGCCAT 59.081 50.000 12.13 0.00 0.00 4.40
3069 5923 0.181114 TGCCACCTTAGCTAGCCATG 59.819 55.000 12.13 0.00 0.00 3.66
3070 5924 0.181350 GCCACCTTAGCTAGCCATGT 59.819 55.000 12.13 0.66 0.00 3.21
3071 5925 1.811941 GCCACCTTAGCTAGCCATGTC 60.812 57.143 12.13 0.00 0.00 3.06
3072 5926 1.486310 CCACCTTAGCTAGCCATGTCA 59.514 52.381 12.13 0.00 0.00 3.58
3073 5927 2.092968 CCACCTTAGCTAGCCATGTCAA 60.093 50.000 12.13 0.00 0.00 3.18
3074 5928 3.609853 CACCTTAGCTAGCCATGTCAAA 58.390 45.455 12.13 0.00 0.00 2.69
3075 5929 3.624861 CACCTTAGCTAGCCATGTCAAAG 59.375 47.826 12.13 4.23 0.00 2.77
3076 5930 3.209410 CCTTAGCTAGCCATGTCAAAGG 58.791 50.000 12.13 9.30 0.00 3.11
3077 5931 3.370953 CCTTAGCTAGCCATGTCAAAGGT 60.371 47.826 12.13 0.00 0.00 3.50
3078 5932 2.119801 AGCTAGCCATGTCAAAGGTG 57.880 50.000 12.13 0.00 0.00 4.00
3079 5933 1.352352 AGCTAGCCATGTCAAAGGTGT 59.648 47.619 12.13 0.00 0.00 4.16
3080 5934 1.470098 GCTAGCCATGTCAAAGGTGTG 59.530 52.381 2.29 0.00 0.00 3.82
3081 5935 2.086869 CTAGCCATGTCAAAGGTGTGG 58.913 52.381 0.00 0.00 0.00 4.17
3083 5937 1.580942 CCATGTCAAAGGTGTGGCG 59.419 57.895 0.00 0.00 0.00 5.69
3084 5938 1.172180 CCATGTCAAAGGTGTGGCGT 61.172 55.000 0.00 0.00 0.00 5.68
3085 5939 0.040157 CATGTCAAAGGTGTGGCGTG 60.040 55.000 0.00 0.00 34.06 5.34
3086 5940 1.795170 ATGTCAAAGGTGTGGCGTGC 61.795 55.000 0.00 0.00 0.00 5.34
3087 5941 2.904866 TCAAAGGTGTGGCGTGCC 60.905 61.111 3.30 3.30 0.00 5.01
3088 5942 4.326766 CAAAGGTGTGGCGTGCCG 62.327 66.667 6.37 0.00 39.42 5.69
3099 5953 4.018609 CGTGCCGCATCTTCCTAG 57.981 61.111 0.00 0.00 0.00 3.02
3100 5954 1.141881 CGTGCCGCATCTTCCTAGT 59.858 57.895 0.00 0.00 0.00 2.57
3101 5955 0.460284 CGTGCCGCATCTTCCTAGTT 60.460 55.000 0.00 0.00 0.00 2.24
3102 5956 1.202371 CGTGCCGCATCTTCCTAGTTA 60.202 52.381 0.00 0.00 0.00 2.24
3103 5957 2.545952 CGTGCCGCATCTTCCTAGTTAT 60.546 50.000 0.00 0.00 0.00 1.89
3104 5958 3.305131 CGTGCCGCATCTTCCTAGTTATA 60.305 47.826 0.00 0.00 0.00 0.98
3105 5959 4.618460 CGTGCCGCATCTTCCTAGTTATAT 60.618 45.833 0.00 0.00 0.00 0.86
3106 5960 4.627467 GTGCCGCATCTTCCTAGTTATATG 59.373 45.833 0.00 0.00 0.00 1.78
3107 5961 4.283467 TGCCGCATCTTCCTAGTTATATGT 59.717 41.667 0.00 0.00 0.00 2.29
3108 5962 5.221641 TGCCGCATCTTCCTAGTTATATGTT 60.222 40.000 0.00 0.00 0.00 2.71
3109 5963 5.701290 GCCGCATCTTCCTAGTTATATGTTT 59.299 40.000 0.00 0.00 0.00 2.83
3110 5964 6.347725 GCCGCATCTTCCTAGTTATATGTTTG 60.348 42.308 0.00 0.00 0.00 2.93
3111 5965 6.147821 CCGCATCTTCCTAGTTATATGTTTGG 59.852 42.308 0.00 0.00 0.00 3.28
3112 5966 6.706270 CGCATCTTCCTAGTTATATGTTTGGT 59.294 38.462 0.00 0.00 0.00 3.67
3113 5967 7.226720 CGCATCTTCCTAGTTATATGTTTGGTT 59.773 37.037 0.00 0.00 0.00 3.67
3114 5968 8.560374 GCATCTTCCTAGTTATATGTTTGGTTC 58.440 37.037 0.00 0.00 0.00 3.62
3115 5969 9.838339 CATCTTCCTAGTTATATGTTTGGTTCT 57.162 33.333 0.00 0.00 0.00 3.01
3117 5971 9.268282 TCTTCCTAGTTATATGTTTGGTTCTCT 57.732 33.333 0.00 0.00 0.00 3.10
3120 5974 9.710818 TCCTAGTTATATGTTTGGTTCTCTACT 57.289 33.333 0.00 0.00 0.00 2.57
3129 5983 7.001099 TGTTTGGTTCTCTACTAAGGTTAGG 57.999 40.000 1.94 0.00 35.08 2.69
3130 5984 5.672421 TTGGTTCTCTACTAAGGTTAGGC 57.328 43.478 1.94 0.00 35.08 3.93
3131 5985 4.944177 TGGTTCTCTACTAAGGTTAGGCT 58.056 43.478 0.00 0.00 35.08 4.58
3132 5986 4.954826 TGGTTCTCTACTAAGGTTAGGCTC 59.045 45.833 0.00 0.00 35.08 4.70
3133 5987 4.036616 GGTTCTCTACTAAGGTTAGGCTCG 59.963 50.000 0.00 0.00 35.08 5.03
3134 5988 4.500499 TCTCTACTAAGGTTAGGCTCGT 57.500 45.455 0.00 0.00 35.08 4.18
3135 5989 4.450053 TCTCTACTAAGGTTAGGCTCGTC 58.550 47.826 0.00 0.00 35.08 4.20
3136 5990 4.080695 TCTCTACTAAGGTTAGGCTCGTCA 60.081 45.833 0.00 0.00 35.08 4.35
3137 5991 3.944015 TCTACTAAGGTTAGGCTCGTCAC 59.056 47.826 0.00 0.00 35.08 3.67
3138 5992 2.522185 ACTAAGGTTAGGCTCGTCACA 58.478 47.619 0.00 0.00 35.08 3.58
3139 5993 2.895404 ACTAAGGTTAGGCTCGTCACAA 59.105 45.455 0.00 0.00 35.08 3.33
3140 5994 3.514309 ACTAAGGTTAGGCTCGTCACAAT 59.486 43.478 0.00 0.00 35.08 2.71
3141 5995 3.418684 AAGGTTAGGCTCGTCACAATT 57.581 42.857 0.00 0.00 0.00 2.32
3142 5996 2.699954 AGGTTAGGCTCGTCACAATTG 58.300 47.619 3.24 3.24 0.00 2.32
3143 5997 2.301870 AGGTTAGGCTCGTCACAATTGA 59.698 45.455 13.59 0.00 0.00 2.57
3144 5998 3.071479 GGTTAGGCTCGTCACAATTGAA 58.929 45.455 13.59 0.00 31.90 2.69
3145 5999 3.500680 GGTTAGGCTCGTCACAATTGAAA 59.499 43.478 13.59 0.00 31.90 2.69
3146 6000 4.378459 GGTTAGGCTCGTCACAATTGAAAG 60.378 45.833 13.59 2.47 31.90 2.62
3147 6001 3.126001 AGGCTCGTCACAATTGAAAGA 57.874 42.857 13.59 6.74 31.90 2.52
3148 6002 3.070018 AGGCTCGTCACAATTGAAAGAG 58.930 45.455 13.59 16.05 39.77 2.85
3149 6003 2.160417 GGCTCGTCACAATTGAAAGAGG 59.840 50.000 13.59 11.99 38.38 3.69
3150 6004 2.413371 GCTCGTCACAATTGAAAGAGGC 60.413 50.000 13.59 5.99 38.38 4.70
3151 6005 3.070018 CTCGTCACAATTGAAAGAGGCT 58.930 45.455 13.59 0.00 36.14 4.58
3152 6006 3.476552 TCGTCACAATTGAAAGAGGCTT 58.523 40.909 13.59 0.00 31.90 4.35
3153 6007 3.882888 TCGTCACAATTGAAAGAGGCTTT 59.117 39.130 13.59 0.00 31.90 3.51
3154 6008 4.338118 TCGTCACAATTGAAAGAGGCTTTT 59.662 37.500 13.59 0.00 31.90 2.27
3155 6009 4.442073 CGTCACAATTGAAAGAGGCTTTTG 59.558 41.667 13.59 0.00 31.90 2.44
3156 6010 4.209911 GTCACAATTGAAAGAGGCTTTTGC 59.790 41.667 13.59 0.00 37.96 3.68
3157 6011 4.099881 TCACAATTGAAAGAGGCTTTTGCT 59.900 37.500 13.59 0.00 46.54 3.91
3158 6012 4.210537 CACAATTGAAAGAGGCTTTTGCTG 59.789 41.667 13.59 0.00 46.54 4.41
3159 6013 4.141869 ACAATTGAAAGAGGCTTTTGCTGT 60.142 37.500 13.59 0.00 46.54 4.40
3160 6014 5.068987 ACAATTGAAAGAGGCTTTTGCTGTA 59.931 36.000 13.59 0.00 46.54 2.74
3161 6015 4.836125 TTGAAAGAGGCTTTTGCTGTAG 57.164 40.909 0.00 0.00 46.54 2.74
3162 6016 4.085357 TGAAAGAGGCTTTTGCTGTAGA 57.915 40.909 0.00 0.00 46.54 2.59
3163 6017 4.460263 TGAAAGAGGCTTTTGCTGTAGAA 58.540 39.130 0.00 0.00 46.54 2.10
3164 6018 4.887071 TGAAAGAGGCTTTTGCTGTAGAAA 59.113 37.500 0.00 0.00 46.54 2.52
3165 6019 5.536161 TGAAAGAGGCTTTTGCTGTAGAAAT 59.464 36.000 0.00 0.00 46.54 2.17
3166 6020 6.040842 TGAAAGAGGCTTTTGCTGTAGAAATT 59.959 34.615 0.00 0.00 46.54 1.82
3167 6021 6.410942 AAGAGGCTTTTGCTGTAGAAATTT 57.589 33.333 0.00 0.00 46.54 1.82
3168 6022 6.410942 AGAGGCTTTTGCTGTAGAAATTTT 57.589 33.333 0.00 0.00 46.54 1.82
3169 6023 6.450545 AGAGGCTTTTGCTGTAGAAATTTTC 58.549 36.000 0.66 0.66 46.54 2.29
3170 6024 5.222631 AGGCTTTTGCTGTAGAAATTTTCG 58.777 37.500 3.57 0.00 46.54 3.46
3171 6025 4.143326 GGCTTTTGCTGTAGAAATTTTCGC 60.143 41.667 3.57 2.29 46.54 4.70
3172 6026 4.143326 GCTTTTGCTGTAGAAATTTTCGCC 60.143 41.667 3.57 0.00 43.35 5.54
3173 6027 4.846779 TTTGCTGTAGAAATTTTCGCCT 57.153 36.364 3.57 0.00 34.02 5.52
3174 6028 5.950758 TTTGCTGTAGAAATTTTCGCCTA 57.049 34.783 3.57 0.00 34.02 3.93
3175 6029 5.950758 TTGCTGTAGAAATTTTCGCCTAA 57.049 34.783 3.57 0.00 34.02 2.69
3176 6030 5.950758 TGCTGTAGAAATTTTCGCCTAAA 57.049 34.783 3.57 0.00 34.02 1.85
3177 6031 5.938322 TGCTGTAGAAATTTTCGCCTAAAG 58.062 37.500 3.57 0.00 34.02 1.85
3178 6032 5.472137 TGCTGTAGAAATTTTCGCCTAAAGT 59.528 36.000 3.57 0.00 34.02 2.66
3179 6033 5.795441 GCTGTAGAAATTTTCGCCTAAAGTG 59.205 40.000 3.57 0.00 34.02 3.16
3180 6034 6.567891 GCTGTAGAAATTTTCGCCTAAAGTGT 60.568 38.462 3.57 0.00 34.02 3.55
3181 6035 6.664515 TGTAGAAATTTTCGCCTAAAGTGTG 58.335 36.000 3.57 0.00 34.02 3.82
3182 6036 5.121221 AGAAATTTTCGCCTAAAGTGTGG 57.879 39.130 3.57 0.00 34.02 4.17
3183 6037 3.297830 AATTTTCGCCTAAAGTGTGGC 57.702 42.857 0.00 0.00 45.25 5.01
3188 6042 2.624169 GCCTAAAGTGTGGCGTTCA 58.376 52.632 0.00 0.00 39.71 3.18
3189 6043 1.165270 GCCTAAAGTGTGGCGTTCAT 58.835 50.000 0.00 0.00 39.71 2.57
3190 6044 1.539827 GCCTAAAGTGTGGCGTTCATT 59.460 47.619 0.00 0.00 39.71 2.57
3191 6045 2.030274 GCCTAAAGTGTGGCGTTCATTT 60.030 45.455 0.00 0.00 39.71 2.32
3192 6046 3.552068 GCCTAAAGTGTGGCGTTCATTTT 60.552 43.478 0.00 0.00 39.71 1.82
3193 6047 3.980775 CCTAAAGTGTGGCGTTCATTTTG 59.019 43.478 7.47 0.00 0.00 2.44
3194 6048 3.791973 AAAGTGTGGCGTTCATTTTGA 57.208 38.095 0.00 0.00 0.00 2.69
3195 6049 2.774439 AGTGTGGCGTTCATTTTGAC 57.226 45.000 0.00 0.00 0.00 3.18
3196 6050 1.336755 AGTGTGGCGTTCATTTTGACC 59.663 47.619 0.00 0.00 0.00 4.02
3197 6051 0.309302 TGTGGCGTTCATTTTGACCG 59.691 50.000 0.00 0.00 35.32 4.79
3200 6054 4.859784 CGTTCATTTTGACCGCCC 57.140 55.556 0.00 0.00 0.00 6.13
3201 6055 1.211709 CGTTCATTTTGACCGCCCC 59.788 57.895 0.00 0.00 0.00 5.80
3202 6056 1.519751 CGTTCATTTTGACCGCCCCA 61.520 55.000 0.00 0.00 0.00 4.96
3203 6057 0.038618 GTTCATTTTGACCGCCCCAC 60.039 55.000 0.00 0.00 0.00 4.61
3204 6058 0.178975 TTCATTTTGACCGCCCCACT 60.179 50.000 0.00 0.00 0.00 4.00
3205 6059 0.178975 TCATTTTGACCGCCCCACTT 60.179 50.000 0.00 0.00 0.00 3.16
3206 6060 0.678950 CATTTTGACCGCCCCACTTT 59.321 50.000 0.00 0.00 0.00 2.66
3207 6061 0.678950 ATTTTGACCGCCCCACTTTG 59.321 50.000 0.00 0.00 0.00 2.77
3208 6062 0.684805 TTTTGACCGCCCCACTTTGT 60.685 50.000 0.00 0.00 0.00 2.83
3209 6063 1.388065 TTTGACCGCCCCACTTTGTG 61.388 55.000 0.00 0.00 0.00 3.33
3231 6085 4.643387 GCCACACCCGCCTCTGTT 62.643 66.667 0.00 0.00 0.00 3.16
3232 6086 2.113139 CCACACCCGCCTCTGTTT 59.887 61.111 0.00 0.00 0.00 2.83
3233 6087 1.373435 CCACACCCGCCTCTGTTTA 59.627 57.895 0.00 0.00 0.00 2.01
3234 6088 0.953960 CCACACCCGCCTCTGTTTAC 60.954 60.000 0.00 0.00 0.00 2.01
3235 6089 1.005394 ACACCCGCCTCTGTTTACG 60.005 57.895 0.00 0.00 0.00 3.18
3236 6090 2.047560 ACCCGCCTCTGTTTACGC 60.048 61.111 0.00 0.00 0.00 4.42
3237 6091 3.186047 CCCGCCTCTGTTTACGCG 61.186 66.667 3.53 3.53 44.08 6.01
3238 6092 2.431942 CCGCCTCTGTTTACGCGT 60.432 61.111 19.17 19.17 42.99 6.01
3239 6093 2.726691 CCGCCTCTGTTTACGCGTG 61.727 63.158 24.59 4.25 42.99 5.34
3240 6094 2.726691 CGCCTCTGTTTACGCGTGG 61.727 63.158 24.59 13.90 39.78 4.94
3241 6095 3.023591 GCCTCTGTTTACGCGTGGC 62.024 63.158 24.59 20.34 0.00 5.01
3242 6096 1.666553 CCTCTGTTTACGCGTGGCA 60.667 57.895 24.59 16.21 0.00 4.92
3243 6097 1.225376 CCTCTGTTTACGCGTGGCAA 61.225 55.000 24.59 5.20 0.00 4.52
3244 6098 0.584396 CTCTGTTTACGCGTGGCAAA 59.416 50.000 24.59 12.14 0.00 3.68
3245 6099 0.305313 TCTGTTTACGCGTGGCAAAC 59.695 50.000 24.59 23.52 33.70 2.93
3246 6100 0.306533 CTGTTTACGCGTGGCAAACT 59.693 50.000 27.11 2.65 34.12 2.66
3247 6101 0.028242 TGTTTACGCGTGGCAAACTG 59.972 50.000 27.11 0.00 34.12 3.16
3248 6102 0.305313 GTTTACGCGTGGCAAACTGA 59.695 50.000 24.59 0.00 31.08 3.41
3249 6103 0.584396 TTTACGCGTGGCAAACTGAG 59.416 50.000 24.59 0.00 0.00 3.35
3250 6104 1.837538 TTACGCGTGGCAAACTGAGC 61.838 55.000 24.59 0.00 0.00 4.26
3251 6105 4.724697 CGCGTGGCAAACTGAGCG 62.725 66.667 0.00 0.00 41.56 5.03
3253 6107 4.389576 CGTGGCAAACTGAGCGCC 62.390 66.667 2.29 1.54 46.43 6.53
3254 6108 4.043200 GTGGCAAACTGAGCGCCC 62.043 66.667 2.29 0.00 45.63 6.13
3255 6109 4.577677 TGGCAAACTGAGCGCCCA 62.578 61.111 2.29 0.00 45.63 5.36
3256 6110 3.294493 GGCAAACTGAGCGCCCAA 61.294 61.111 2.29 0.00 40.07 4.12
3257 6111 2.050077 GCAAACTGAGCGCCCAAC 60.050 61.111 2.29 0.00 0.00 3.77
3258 6112 2.644992 CAAACTGAGCGCCCAACC 59.355 61.111 2.29 0.00 0.00 3.77
3259 6113 2.192861 CAAACTGAGCGCCCAACCA 61.193 57.895 2.29 0.00 0.00 3.67
3260 6114 1.454847 AAACTGAGCGCCCAACCAA 60.455 52.632 2.29 0.00 0.00 3.67
3261 6115 1.040339 AAACTGAGCGCCCAACCAAA 61.040 50.000 2.29 0.00 0.00 3.28
3262 6116 1.734388 AACTGAGCGCCCAACCAAAC 61.734 55.000 2.29 0.00 0.00 2.93
3263 6117 2.124109 TGAGCGCCCAACCAAACA 60.124 55.556 2.29 0.00 0.00 2.83
3264 6118 2.133742 CTGAGCGCCCAACCAAACAG 62.134 60.000 2.29 0.00 0.00 3.16
3265 6119 3.558099 GAGCGCCCAACCAAACAGC 62.558 63.158 2.29 0.00 0.00 4.40
3266 6120 4.662961 GCGCCCAACCAAACAGCC 62.663 66.667 0.00 0.00 0.00 4.85
3267 6121 3.989787 CGCCCAACCAAACAGCCC 61.990 66.667 0.00 0.00 0.00 5.19
3268 6122 3.625897 GCCCAACCAAACAGCCCC 61.626 66.667 0.00 0.00 0.00 5.80
3274 6128 3.673484 CCAAACAGCCCCAGCGTG 61.673 66.667 0.00 0.00 46.67 5.34
3289 6143 1.991430 CGTGCTGTCATGCTCGTAC 59.009 57.895 0.00 0.00 42.54 3.67
3290 6144 0.456824 CGTGCTGTCATGCTCGTACT 60.457 55.000 0.00 0.00 42.54 2.73
3291 6145 1.714794 GTGCTGTCATGCTCGTACTT 58.285 50.000 0.00 0.00 0.00 2.24
3292 6146 1.391485 GTGCTGTCATGCTCGTACTTG 59.609 52.381 0.00 0.00 0.00 3.16
3293 6147 1.000843 TGCTGTCATGCTCGTACTTGT 59.999 47.619 0.00 0.00 0.00 3.16
3342 6202 0.247736 AGCTTGGTCTACCTGCTTCG 59.752 55.000 12.27 0.00 41.18 3.79
3343 6203 0.741221 GCTTGGTCTACCTGCTTCGG 60.741 60.000 0.02 0.00 36.82 4.30
3344 6204 0.741221 CTTGGTCTACCTGCTTCGGC 60.741 60.000 0.02 0.00 42.19 5.54
3356 6216 1.766069 GCTTCGGCAAATTTTCGTGT 58.234 45.000 9.58 0.00 41.33 4.49
3357 6217 2.124122 GCTTCGGCAAATTTTCGTGTT 58.876 42.857 9.58 0.00 41.33 3.32
3358 6218 2.538037 GCTTCGGCAAATTTTCGTGTTT 59.462 40.909 9.58 0.00 41.33 2.83
3359 6219 3.000825 GCTTCGGCAAATTTTCGTGTTTT 59.999 39.130 9.58 0.00 41.33 2.43
3360 6220 4.504385 CTTCGGCAAATTTTCGTGTTTTG 58.496 39.130 9.58 0.00 34.30 2.44
3361 6221 3.770666 TCGGCAAATTTTCGTGTTTTGA 58.229 36.364 9.58 0.00 33.24 2.69
3362 6222 4.174009 TCGGCAAATTTTCGTGTTTTGAA 58.826 34.783 9.58 0.00 33.24 2.69
3363 6223 4.031878 TCGGCAAATTTTCGTGTTTTGAAC 59.968 37.500 9.58 0.00 33.24 3.18
3364 6224 4.583426 GGCAAATTTTCGTGTTTTGAACC 58.417 39.130 0.00 0.00 33.24 3.62
3365 6225 4.331443 GGCAAATTTTCGTGTTTTGAACCT 59.669 37.500 0.00 0.00 33.24 3.50
3366 6226 5.163804 GGCAAATTTTCGTGTTTTGAACCTT 60.164 36.000 0.00 0.00 33.24 3.50
3367 6227 6.310960 GCAAATTTTCGTGTTTTGAACCTTT 58.689 32.000 0.00 0.00 33.24 3.11
3368 6228 6.799441 GCAAATTTTCGTGTTTTGAACCTTTT 59.201 30.769 0.00 0.00 33.24 2.27
3369 6229 7.958025 GCAAATTTTCGTGTTTTGAACCTTTTA 59.042 29.630 0.00 0.00 33.24 1.52
3370 6230 9.256715 CAAATTTTCGTGTTTTGAACCTTTTAC 57.743 29.630 0.00 0.00 33.24 2.01
3371 6231 8.766000 AATTTTCGTGTTTTGAACCTTTTACT 57.234 26.923 0.00 0.00 0.00 2.24
3372 6232 9.857957 AATTTTCGTGTTTTGAACCTTTTACTA 57.142 25.926 0.00 0.00 0.00 1.82
3394 6254 8.152023 ACTATATAAATTCAGGATCTGACCCC 57.848 38.462 0.00 0.00 40.46 4.95
3395 6255 2.717639 AAATTCAGGATCTGACCCCG 57.282 50.000 0.00 0.00 40.46 5.73
3396 6256 0.839946 AATTCAGGATCTGACCCCGG 59.160 55.000 0.00 0.00 40.46 5.73
3397 6257 0.326618 ATTCAGGATCTGACCCCGGT 60.327 55.000 0.00 0.00 40.46 5.28
3398 6258 0.546747 TTCAGGATCTGACCCCGGTT 60.547 55.000 0.00 0.00 40.46 4.44
3399 6259 1.221840 CAGGATCTGACCCCGGTTG 59.778 63.158 0.00 0.00 32.44 3.77
3400 6260 1.080354 AGGATCTGACCCCGGTTGA 59.920 57.895 0.00 0.00 0.00 3.18
3401 6261 0.546747 AGGATCTGACCCCGGTTGAA 60.547 55.000 0.00 0.00 0.00 2.69
3402 6262 0.326927 GGATCTGACCCCGGTTGAAA 59.673 55.000 0.00 0.00 0.00 2.69
3403 6263 1.271707 GGATCTGACCCCGGTTGAAAA 60.272 52.381 0.00 0.00 0.00 2.29
3404 6264 2.510613 GATCTGACCCCGGTTGAAAAA 58.489 47.619 0.00 0.00 0.00 1.94
3428 6288 8.595362 AAAAATTCGGGATAGATCCTTTTTCT 57.405 30.769 8.45 0.00 46.35 2.52
3429 6289 8.595362 AAAATTCGGGATAGATCCTTTTTCTT 57.405 30.769 8.45 0.00 46.35 2.52
3430 6290 9.695155 AAAATTCGGGATAGATCCTTTTTCTTA 57.305 29.630 8.45 0.00 46.35 2.10
3431 6291 8.678593 AATTCGGGATAGATCCTTTTTCTTAC 57.321 34.615 8.45 0.00 46.35 2.34
3432 6292 7.433537 TTCGGGATAGATCCTTTTTCTTACT 57.566 36.000 8.45 0.00 46.35 2.24
3433 6293 6.817184 TCGGGATAGATCCTTTTTCTTACTG 58.183 40.000 8.45 0.00 46.35 2.74
3434 6294 5.467063 CGGGATAGATCCTTTTTCTTACTGC 59.533 44.000 8.45 0.00 46.35 4.40
3435 6295 5.765677 GGGATAGATCCTTTTTCTTACTGCC 59.234 44.000 8.45 0.00 46.35 4.85
3436 6296 6.357367 GGATAGATCCTTTTTCTTACTGCCA 58.643 40.000 0.98 0.00 43.73 4.92
3437 6297 6.484977 GGATAGATCCTTTTTCTTACTGCCAG 59.515 42.308 0.98 0.00 43.73 4.85
3438 6298 4.593956 AGATCCTTTTTCTTACTGCCAGG 58.406 43.478 0.00 0.00 0.00 4.45
3439 6299 3.154827 TCCTTTTTCTTACTGCCAGGG 57.845 47.619 0.00 0.00 0.00 4.45
3440 6300 2.445525 TCCTTTTTCTTACTGCCAGGGT 59.554 45.455 0.00 0.00 0.00 4.34
3441 6301 3.117284 TCCTTTTTCTTACTGCCAGGGTT 60.117 43.478 0.00 0.00 0.00 4.11
3442 6302 3.641436 CCTTTTTCTTACTGCCAGGGTTT 59.359 43.478 0.00 0.00 0.00 3.27
3443 6303 4.262036 CCTTTTTCTTACTGCCAGGGTTTC 60.262 45.833 0.00 0.00 0.00 2.78
3444 6304 3.876309 TTTCTTACTGCCAGGGTTTCT 57.124 42.857 0.00 0.00 0.00 2.52
3445 6305 2.859165 TCTTACTGCCAGGGTTTCTG 57.141 50.000 0.00 0.00 43.00 3.02
3452 6312 4.617875 CAGGGTTTCTGGCGGTAG 57.382 61.111 0.00 0.00 39.76 3.18
3453 6313 1.677552 CAGGGTTTCTGGCGGTAGT 59.322 57.895 0.00 0.00 39.76 2.73
3454 6314 0.673644 CAGGGTTTCTGGCGGTAGTG 60.674 60.000 0.00 0.00 39.76 2.74
3455 6315 1.125711 AGGGTTTCTGGCGGTAGTGT 61.126 55.000 0.00 0.00 0.00 3.55
3456 6316 0.250597 GGGTTTCTGGCGGTAGTGTT 60.251 55.000 0.00 0.00 0.00 3.32
3457 6317 1.002315 GGGTTTCTGGCGGTAGTGTTA 59.998 52.381 0.00 0.00 0.00 2.41
3458 6318 2.344025 GGTTTCTGGCGGTAGTGTTAG 58.656 52.381 0.00 0.00 0.00 2.34
3459 6319 2.028748 GGTTTCTGGCGGTAGTGTTAGA 60.029 50.000 0.00 0.00 0.00 2.10
3460 6320 2.991866 GTTTCTGGCGGTAGTGTTAGAC 59.008 50.000 0.00 0.00 0.00 2.59
3461 6321 1.913778 TCTGGCGGTAGTGTTAGACA 58.086 50.000 0.00 0.00 0.00 3.41
3462 6322 1.816835 TCTGGCGGTAGTGTTAGACAG 59.183 52.381 0.00 0.00 0.00 3.51
3463 6323 0.892755 TGGCGGTAGTGTTAGACAGG 59.107 55.000 0.00 0.00 0.00 4.00
3464 6324 0.459759 GGCGGTAGTGTTAGACAGGC 60.460 60.000 0.00 0.00 0.00 4.85
3465 6325 0.531200 GCGGTAGTGTTAGACAGGCT 59.469 55.000 0.00 0.00 0.00 4.58
3466 6326 1.747355 GCGGTAGTGTTAGACAGGCTA 59.253 52.381 0.00 0.00 0.00 3.93
3467 6327 2.479219 GCGGTAGTGTTAGACAGGCTAC 60.479 54.545 0.00 0.00 31.00 3.58
3468 6328 2.098770 CGGTAGTGTTAGACAGGCTACC 59.901 54.545 13.69 13.69 41.11 3.18
3469 6329 2.098770 GGTAGTGTTAGACAGGCTACCG 59.901 54.545 10.34 0.00 37.78 4.02
3470 6330 0.531200 AGTGTTAGACAGGCTACCGC 59.469 55.000 0.00 0.00 0.00 5.68
3488 6348 3.854669 CAGGGAGGCTGGCGGTAG 61.855 72.222 0.00 0.00 0.00 3.18
3498 6358 4.773209 GGCGGTAGGGCAGTAATC 57.227 61.111 0.00 0.00 41.77 1.75
3499 6359 1.070957 GGCGGTAGGGCAGTAATCC 59.929 63.158 0.00 0.00 41.77 3.01
3500 6360 1.692173 GGCGGTAGGGCAGTAATCCA 61.692 60.000 0.00 0.00 41.77 3.41
3501 6361 0.532196 GCGGTAGGGCAGTAATCCAC 60.532 60.000 0.00 0.00 0.00 4.02
3502 6362 0.249322 CGGTAGGGCAGTAATCCACG 60.249 60.000 0.00 0.00 0.00 4.94
3503 6363 0.828677 GGTAGGGCAGTAATCCACGT 59.171 55.000 0.00 0.00 0.00 4.49
3504 6364 1.202498 GGTAGGGCAGTAATCCACGTC 60.202 57.143 0.00 0.00 0.00 4.34
3505 6365 1.479323 GTAGGGCAGTAATCCACGTCA 59.521 52.381 0.00 0.00 0.00 4.35
3506 6366 0.537188 AGGGCAGTAATCCACGTCAG 59.463 55.000 0.00 0.00 0.00 3.51
3507 6367 1.090052 GGGCAGTAATCCACGTCAGC 61.090 60.000 0.00 0.00 0.00 4.26
3508 6368 0.391130 GGCAGTAATCCACGTCAGCA 60.391 55.000 0.00 0.00 0.00 4.41
3509 6369 0.721718 GCAGTAATCCACGTCAGCAC 59.278 55.000 0.00 0.00 0.00 4.40
3546 6406 3.834799 CCCTCCGTCGCACCCTAC 61.835 72.222 0.00 0.00 0.00 3.18
3547 6407 3.834799 CCTCCGTCGCACCCTACC 61.835 72.222 0.00 0.00 0.00 3.18
3548 6408 4.189188 CTCCGTCGCACCCTACCG 62.189 72.222 0.00 0.00 0.00 4.02
3552 6412 4.814294 GTCGCACCCTACCGCCAG 62.814 72.222 0.00 0.00 0.00 4.85
3578 6438 2.202810 GCGGTAGCCTGTCTGAGC 60.203 66.667 0.00 0.00 37.42 4.26
3579 6439 2.496817 CGGTAGCCTGTCTGAGCC 59.503 66.667 0.00 0.00 0.00 4.70
3580 6440 2.055042 CGGTAGCCTGTCTGAGCCT 61.055 63.158 0.00 0.00 0.00 4.58
3581 6441 0.752009 CGGTAGCCTGTCTGAGCCTA 60.752 60.000 0.00 0.00 0.00 3.93
3582 6442 0.747852 GGTAGCCTGTCTGAGCCTAC 59.252 60.000 0.00 0.00 0.00 3.18
3583 6443 0.747852 GTAGCCTGTCTGAGCCTACC 59.252 60.000 0.00 0.00 0.00 3.18
3584 6444 0.752009 TAGCCTGTCTGAGCCTACCG 60.752 60.000 0.00 0.00 0.00 4.02
3585 6445 2.496817 CCTGTCTGAGCCTACCGC 59.503 66.667 0.00 0.00 37.98 5.68
3586 6446 2.496817 CTGTCTGAGCCTACCGCC 59.503 66.667 0.00 0.00 38.78 6.13
3587 6447 2.283604 TGTCTGAGCCTACCGCCA 60.284 61.111 0.00 0.00 38.78 5.69
3588 6448 2.290122 CTGTCTGAGCCTACCGCCAG 62.290 65.000 0.00 0.00 38.78 4.85
3589 6449 3.461773 TCTGAGCCTACCGCCAGC 61.462 66.667 0.00 0.00 38.78 4.85
3590 6450 4.880537 CTGAGCCTACCGCCAGCG 62.881 72.222 4.75 4.75 38.78 5.18
3592 6452 4.874977 GAGCCTACCGCCAGCGTC 62.875 72.222 11.55 0.00 38.78 5.19
3609 6469 4.143333 CCGTGGCGGTAGGGTCAG 62.143 72.222 0.00 0.00 42.73 3.51
3610 6470 4.143333 CGTGGCGGTAGGGTCAGG 62.143 72.222 0.00 0.00 0.00 3.86
3611 6471 3.782443 GTGGCGGTAGGGTCAGGG 61.782 72.222 0.00 0.00 0.00 4.45
3614 6474 3.712907 GCGGTAGGGTCAGGGCAA 61.713 66.667 0.00 0.00 0.00 4.52
3615 6475 3.043999 GCGGTAGGGTCAGGGCAAT 62.044 63.158 0.00 0.00 0.00 3.56
3616 6476 1.607612 CGGTAGGGTCAGGGCAATT 59.392 57.895 0.00 0.00 0.00 2.32
3617 6477 0.834612 CGGTAGGGTCAGGGCAATTA 59.165 55.000 0.00 0.00 0.00 1.40
3618 6478 1.420138 CGGTAGGGTCAGGGCAATTAT 59.580 52.381 0.00 0.00 0.00 1.28
3619 6479 2.158667 CGGTAGGGTCAGGGCAATTATT 60.159 50.000 0.00 0.00 0.00 1.40
3620 6480 3.687264 CGGTAGGGTCAGGGCAATTATTT 60.687 47.826 0.00 0.00 0.00 1.40
3621 6481 3.889538 GGTAGGGTCAGGGCAATTATTTC 59.110 47.826 0.00 0.00 0.00 2.17
3622 6482 2.654863 AGGGTCAGGGCAATTATTTCG 58.345 47.619 0.00 0.00 0.00 3.46
3623 6483 1.067060 GGGTCAGGGCAATTATTTCGC 59.933 52.381 0.00 0.00 0.00 4.70
3624 6484 1.067060 GGTCAGGGCAATTATTTCGCC 59.933 52.381 0.00 0.00 45.47 5.54
3629 6489 2.570442 GGCAATTATTTCGCCCGAAA 57.430 45.000 16.85 16.85 46.37 3.46
3630 6490 2.190161 GGCAATTATTTCGCCCGAAAC 58.810 47.619 16.87 4.69 45.34 2.78
3631 6491 2.190161 GCAATTATTTCGCCCGAAACC 58.810 47.619 16.87 0.62 45.34 3.27
3632 6492 2.804647 CAATTATTTCGCCCGAAACCC 58.195 47.619 16.87 0.00 45.34 4.11
3633 6493 1.395635 ATTATTTCGCCCGAAACCCC 58.604 50.000 16.87 0.00 45.34 4.95
3634 6494 1.025647 TTATTTCGCCCGAAACCCCG 61.026 55.000 16.87 0.00 45.34 5.73
3642 6502 4.653888 CGAAACCCCGCACCCCTT 62.654 66.667 0.00 0.00 0.00 3.95
3643 6503 2.675423 GAAACCCCGCACCCCTTC 60.675 66.667 0.00 0.00 0.00 3.46
3644 6504 4.295199 AAACCCCGCACCCCTTCC 62.295 66.667 0.00 0.00 0.00 3.46
3666 6526 4.323477 CCCCCGTCGGCAGTTTCA 62.323 66.667 5.50 0.00 0.00 2.69
3667 6527 2.046314 CCCCGTCGGCAGTTTCAT 60.046 61.111 5.50 0.00 0.00 2.57
3668 6528 2.106683 CCCCGTCGGCAGTTTCATC 61.107 63.158 5.50 0.00 0.00 2.92
3669 6529 1.079127 CCCGTCGGCAGTTTCATCT 60.079 57.895 5.50 0.00 0.00 2.90
3670 6530 0.673644 CCCGTCGGCAGTTTCATCTT 60.674 55.000 5.50 0.00 0.00 2.40
3671 6531 1.156736 CCGTCGGCAGTTTCATCTTT 58.843 50.000 0.00 0.00 0.00 2.52
3672 6532 1.535462 CCGTCGGCAGTTTCATCTTTT 59.465 47.619 0.00 0.00 0.00 2.27
3673 6533 2.574322 CGTCGGCAGTTTCATCTTTTG 58.426 47.619 0.00 0.00 0.00 2.44
3674 6534 2.032030 CGTCGGCAGTTTCATCTTTTGT 60.032 45.455 0.00 0.00 0.00 2.83
3675 6535 3.548014 CGTCGGCAGTTTCATCTTTTGTT 60.548 43.478 0.00 0.00 0.00 2.83
3676 6536 3.975035 GTCGGCAGTTTCATCTTTTGTTC 59.025 43.478 0.00 0.00 0.00 3.18
3677 6537 3.004315 TCGGCAGTTTCATCTTTTGTTCC 59.996 43.478 0.00 0.00 0.00 3.62
3678 6538 3.653344 GGCAGTTTCATCTTTTGTTCCC 58.347 45.455 0.00 0.00 0.00 3.97
3679 6539 3.554960 GGCAGTTTCATCTTTTGTTCCCC 60.555 47.826 0.00 0.00 0.00 4.81
3680 6540 3.069443 GCAGTTTCATCTTTTGTTCCCCA 59.931 43.478 0.00 0.00 0.00 4.96
3681 6541 4.442753 GCAGTTTCATCTTTTGTTCCCCAA 60.443 41.667 0.00 0.00 0.00 4.12
3682 6542 5.049828 CAGTTTCATCTTTTGTTCCCCAAC 58.950 41.667 0.00 0.00 31.20 3.77
3683 6543 4.962362 AGTTTCATCTTTTGTTCCCCAACT 59.038 37.500 0.00 0.00 33.17 3.16
3684 6544 5.069119 AGTTTCATCTTTTGTTCCCCAACTC 59.931 40.000 0.00 0.00 33.17 3.01
3685 6545 3.146066 TCATCTTTTGTTCCCCAACTCG 58.854 45.455 0.00 0.00 33.17 4.18
3686 6546 1.314730 TCTTTTGTTCCCCAACTCGC 58.685 50.000 0.00 0.00 33.17 5.03
3687 6547 0.313987 CTTTTGTTCCCCAACTCGCC 59.686 55.000 0.00 0.00 33.17 5.54
3688 6548 1.110518 TTTTGTTCCCCAACTCGCCC 61.111 55.000 0.00 0.00 33.17 6.13
3689 6549 2.987355 TTTGTTCCCCAACTCGCCCC 62.987 60.000 0.00 0.00 33.17 5.80
3690 6550 3.647771 GTTCCCCAACTCGCCCCT 61.648 66.667 0.00 0.00 0.00 4.79
3691 6551 3.327404 TTCCCCAACTCGCCCCTC 61.327 66.667 0.00 0.00 0.00 4.30
3692 6552 3.864983 TTCCCCAACTCGCCCCTCT 62.865 63.158 0.00 0.00 0.00 3.69
3693 6553 3.787001 CCCCAACTCGCCCCTCTC 61.787 72.222 0.00 0.00 0.00 3.20
3694 6554 2.685380 CCCAACTCGCCCCTCTCT 60.685 66.667 0.00 0.00 0.00 3.10
3695 6555 2.726351 CCCAACTCGCCCCTCTCTC 61.726 68.421 0.00 0.00 0.00 3.20
3696 6556 2.726351 CCAACTCGCCCCTCTCTCC 61.726 68.421 0.00 0.00 0.00 3.71
3697 6557 2.364448 AACTCGCCCCTCTCTCCC 60.364 66.667 0.00 0.00 0.00 4.30
3698 6558 2.937285 AACTCGCCCCTCTCTCCCT 61.937 63.158 0.00 0.00 0.00 4.20
3699 6559 2.520741 CTCGCCCCTCTCTCCCTC 60.521 72.222 0.00 0.00 0.00 4.30
3700 6560 3.024356 TCGCCCCTCTCTCCCTCT 61.024 66.667 0.00 0.00 0.00 3.69
3701 6561 2.520741 CGCCCCTCTCTCCCTCTC 60.521 72.222 0.00 0.00 0.00 3.20
3702 6562 3.024217 GCCCCTCTCTCCCTCTCT 58.976 66.667 0.00 0.00 0.00 3.10
3703 6563 1.152546 GCCCCTCTCTCCCTCTCTC 60.153 68.421 0.00 0.00 0.00 3.20
3704 6564 1.943730 GCCCCTCTCTCCCTCTCTCA 61.944 65.000 0.00 0.00 0.00 3.27
3705 6565 0.859760 CCCCTCTCTCCCTCTCTCAT 59.140 60.000 0.00 0.00 0.00 2.90
3706 6566 1.203050 CCCCTCTCTCCCTCTCTCATC 60.203 61.905 0.00 0.00 0.00 2.92
3707 6567 1.782752 CCCTCTCTCCCTCTCTCATCT 59.217 57.143 0.00 0.00 0.00 2.90
3708 6568 2.224867 CCCTCTCTCCCTCTCTCATCTC 60.225 59.091 0.00 0.00 0.00 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
134 135 5.642063 ACCAACAATACTTTGATACTCCGTG 59.358 40.000 0.00 0.00 36.64 4.94
146 147 2.297033 CTGCAAGCCACCAACAATACTT 59.703 45.455 0.00 0.00 0.00 2.24
453 454 2.257894 CTCTGTGCTACTGCGAGAAAG 58.742 52.381 0.00 0.00 43.34 2.62
464 465 2.215942 TGTACTCAGCCTCTGTGCTA 57.784 50.000 0.00 0.00 40.32 3.49
494 495 2.959507 TAAGCTCAGCAGTCGCATTA 57.040 45.000 0.00 0.00 42.27 1.90
660 661 0.179032 TGTGCAACACGTTCCCTCAT 60.179 50.000 0.00 0.00 45.67 2.90
717 718 2.037902 TGGTGAAGATGTCGGCAAGTTA 59.962 45.455 0.00 0.00 0.00 2.24
770 771 0.392193 AGAGGTTGAGATTGCGCCTG 60.392 55.000 4.18 0.00 0.00 4.85
789 790 4.467438 TCAACTCACTCCTGATGCATCTAA 59.533 41.667 26.32 11.37 0.00 2.10
919 920 1.346722 AGACGTAGGGTTTGTGGGAAG 59.653 52.381 0.00 0.00 0.00 3.46
944 945 0.631212 CTGGTTCCCTATTTGGCCCT 59.369 55.000 0.00 0.00 0.00 5.19
974 975 4.640201 CGAGAGAATTTCTTATTTGGCCCA 59.360 41.667 0.00 0.00 35.87 5.36
977 978 6.422776 TGACGAGAGAATTTCTTATTTGGC 57.577 37.500 0.00 0.00 35.87 4.52
987 988 6.042777 TCGAGCAATAATGACGAGAGAATTT 58.957 36.000 0.00 0.00 34.09 1.82
991 992 4.517075 AGATCGAGCAATAATGACGAGAGA 59.483 41.667 2.38 0.00 39.08 3.10
992 993 4.616381 CAGATCGAGCAATAATGACGAGAG 59.384 45.833 2.38 0.00 39.08 3.20
1392 2313 1.229951 AGGTTCTCCATGCCTGGGA 60.230 57.895 8.28 1.90 43.34 4.37
2007 4804 1.896660 GCTTTGCGTCCAAGGTCCA 60.897 57.895 0.00 0.00 31.27 4.02
2008 4805 2.954611 GCTTTGCGTCCAAGGTCC 59.045 61.111 0.00 0.00 31.27 4.46
2100 4897 4.390556 AGAGAGGTCCAGGCCGCT 62.391 66.667 0.00 5.97 41.37 5.52
2353 5188 0.807496 GTAGAACTGGTCCGCGTACT 59.193 55.000 4.92 0.00 0.00 2.73
2394 5229 0.037303 CTGACACCCACCTTGAGCAT 59.963 55.000 0.00 0.00 0.00 3.79
2574 5421 1.136500 GTACGAAGATCCGCCCTTCTT 59.864 52.381 0.00 0.00 38.23 2.52
2616 5463 1.375908 GGCGAGCCATCAACTCACA 60.376 57.895 9.58 0.00 33.58 3.58
2673 5520 3.417275 CTAGTCAGTCGGCAGGCGG 62.417 68.421 17.49 4.62 0.00 6.13
2713 5562 6.821665 GCCACCTCATGTTGAAATAACTACTA 59.178 38.462 0.00 0.00 0.00 1.82
2724 5573 2.161855 GATGTTGCCACCTCATGTTGA 58.838 47.619 0.00 0.00 0.00 3.18
2869 5718 1.852067 GCCACGGCGTTTCATCAGTT 61.852 55.000 11.19 0.00 0.00 3.16
2978 5832 7.763172 ATATTTTTGCTGAGAGACGTAAGAG 57.237 36.000 0.00 0.00 43.62 2.85
2979 5833 9.647797 TTTATATTTTTGCTGAGAGACGTAAGA 57.352 29.630 0.00 0.00 43.62 2.10
2981 5835 9.647797 TCTTTATATTTTTGCTGAGAGACGTAA 57.352 29.630 0.00 0.00 0.00 3.18
2982 5836 9.647797 TTCTTTATATTTTTGCTGAGAGACGTA 57.352 29.630 0.00 0.00 0.00 3.57
2983 5837 8.547967 TTCTTTATATTTTTGCTGAGAGACGT 57.452 30.769 0.00 0.00 0.00 4.34
2984 5838 9.267096 GTTTCTTTATATTTTTGCTGAGAGACG 57.733 33.333 0.00 0.00 0.00 4.18
3030 5884 0.324943 ACCAAACAGCCTCGCTATGT 59.675 50.000 0.00 0.00 36.40 2.29
3031 5885 1.131126 CAACCAAACAGCCTCGCTATG 59.869 52.381 0.00 0.00 36.40 2.23
3032 5886 1.453155 CAACCAAACAGCCTCGCTAT 58.547 50.000 0.00 0.00 36.40 2.97
3033 5887 1.234615 GCAACCAAACAGCCTCGCTA 61.235 55.000 0.00 0.00 36.40 4.26
3034 5888 2.555547 GCAACCAAACAGCCTCGCT 61.556 57.895 0.00 0.00 40.77 4.93
3035 5889 2.050077 GCAACCAAACAGCCTCGC 60.050 61.111 0.00 0.00 0.00 5.03
3036 5890 2.644992 GGCAACCAAACAGCCTCG 59.355 61.111 0.00 0.00 44.92 4.63
3039 5893 2.421314 GGTGGCAACCAAACAGCC 59.579 61.111 5.00 0.00 46.75 4.85
3048 5902 0.035439 TGGCTAGCTAAGGTGGCAAC 60.035 55.000 15.72 0.00 39.21 4.17
3049 5903 0.918983 ATGGCTAGCTAAGGTGGCAA 59.081 50.000 15.72 0.00 39.21 4.52
3050 5904 0.181114 CATGGCTAGCTAAGGTGGCA 59.819 55.000 15.72 9.03 39.21 4.92
3051 5905 0.181350 ACATGGCTAGCTAAGGTGGC 59.819 55.000 15.72 0.00 36.82 5.01
3052 5906 1.486310 TGACATGGCTAGCTAAGGTGG 59.514 52.381 15.72 0.38 0.00 4.61
3053 5907 2.988010 TGACATGGCTAGCTAAGGTG 57.012 50.000 15.72 6.65 0.00 4.00
3054 5908 3.370953 CCTTTGACATGGCTAGCTAAGGT 60.371 47.826 15.72 11.48 0.00 3.50
3055 5909 3.209410 CCTTTGACATGGCTAGCTAAGG 58.791 50.000 15.72 7.27 0.00 2.69
3056 5910 3.624861 CACCTTTGACATGGCTAGCTAAG 59.375 47.826 15.72 8.39 0.00 2.18
3057 5911 3.009033 ACACCTTTGACATGGCTAGCTAA 59.991 43.478 15.72 3.70 0.00 3.09
3058 5912 2.571653 ACACCTTTGACATGGCTAGCTA 59.428 45.455 15.72 9.47 0.00 3.32
3059 5913 1.352352 ACACCTTTGACATGGCTAGCT 59.648 47.619 15.72 0.00 0.00 3.32
3060 5914 1.470098 CACACCTTTGACATGGCTAGC 59.530 52.381 6.04 6.04 0.00 3.42
3061 5915 2.086869 CCACACCTTTGACATGGCTAG 58.913 52.381 0.00 0.00 0.00 3.42
3062 5916 2.198827 CCACACCTTTGACATGGCTA 57.801 50.000 0.00 0.00 0.00 3.93
3063 5917 3.040965 CCACACCTTTGACATGGCT 57.959 52.632 0.00 0.00 0.00 4.75
3065 5919 1.172180 ACGCCACACCTTTGACATGG 61.172 55.000 0.00 0.00 0.00 3.66
3066 5920 0.040157 CACGCCACACCTTTGACATG 60.040 55.000 0.00 0.00 0.00 3.21
3067 5921 1.795170 GCACGCCACACCTTTGACAT 61.795 55.000 0.00 0.00 0.00 3.06
3068 5922 2.477176 GCACGCCACACCTTTGACA 61.477 57.895 0.00 0.00 0.00 3.58
3069 5923 2.331451 GCACGCCACACCTTTGAC 59.669 61.111 0.00 0.00 0.00 3.18
3070 5924 2.904866 GGCACGCCACACCTTTGA 60.905 61.111 2.36 0.00 35.81 2.69
3083 5937 2.596904 TAACTAGGAAGATGCGGCAC 57.403 50.000 4.03 0.00 0.00 5.01
3084 5938 4.283467 ACATATAACTAGGAAGATGCGGCA 59.717 41.667 4.58 4.58 0.00 5.69
3085 5939 4.822026 ACATATAACTAGGAAGATGCGGC 58.178 43.478 0.00 0.00 0.00 6.53
3086 5940 6.147821 CCAAACATATAACTAGGAAGATGCGG 59.852 42.308 0.00 0.00 0.00 5.69
3087 5941 6.706270 ACCAAACATATAACTAGGAAGATGCG 59.294 38.462 0.00 0.00 0.00 4.73
3088 5942 8.451908 AACCAAACATATAACTAGGAAGATGC 57.548 34.615 0.00 0.00 0.00 3.91
3089 5943 9.838339 AGAACCAAACATATAACTAGGAAGATG 57.162 33.333 0.00 0.00 0.00 2.90
3091 5945 9.268282 AGAGAACCAAACATATAACTAGGAAGA 57.732 33.333 0.00 0.00 0.00 2.87
3094 5948 9.710818 AGTAGAGAACCAAACATATAACTAGGA 57.289 33.333 0.00 0.00 0.00 2.94
3103 5957 8.755977 CCTAACCTTAGTAGAGAACCAAACATA 58.244 37.037 0.00 0.00 0.00 2.29
3104 5958 7.621796 CCTAACCTTAGTAGAGAACCAAACAT 58.378 38.462 0.00 0.00 0.00 2.71
3105 5959 6.519551 GCCTAACCTTAGTAGAGAACCAAACA 60.520 42.308 0.00 0.00 0.00 2.83
3106 5960 5.873712 GCCTAACCTTAGTAGAGAACCAAAC 59.126 44.000 0.00 0.00 0.00 2.93
3107 5961 5.783875 AGCCTAACCTTAGTAGAGAACCAAA 59.216 40.000 0.00 0.00 0.00 3.28
3108 5962 5.339477 AGCCTAACCTTAGTAGAGAACCAA 58.661 41.667 0.00 0.00 0.00 3.67
3109 5963 4.944177 AGCCTAACCTTAGTAGAGAACCA 58.056 43.478 0.00 0.00 0.00 3.67
3110 5964 4.036616 CGAGCCTAACCTTAGTAGAGAACC 59.963 50.000 0.00 0.00 0.00 3.62
3111 5965 4.639755 ACGAGCCTAACCTTAGTAGAGAAC 59.360 45.833 0.00 0.00 0.00 3.01
3112 5966 4.853007 ACGAGCCTAACCTTAGTAGAGAA 58.147 43.478 0.00 0.00 0.00 2.87
3113 5967 4.080695 TGACGAGCCTAACCTTAGTAGAGA 60.081 45.833 0.00 0.00 0.00 3.10
3114 5968 4.035441 GTGACGAGCCTAACCTTAGTAGAG 59.965 50.000 0.00 0.00 0.00 2.43
3115 5969 3.944015 GTGACGAGCCTAACCTTAGTAGA 59.056 47.826 0.00 0.00 0.00 2.59
3116 5970 3.693085 TGTGACGAGCCTAACCTTAGTAG 59.307 47.826 0.00 0.00 0.00 2.57
3117 5971 3.689347 TGTGACGAGCCTAACCTTAGTA 58.311 45.455 0.00 0.00 0.00 1.82
3118 5972 2.522185 TGTGACGAGCCTAACCTTAGT 58.478 47.619 0.00 0.00 0.00 2.24
3119 5973 3.587797 TTGTGACGAGCCTAACCTTAG 57.412 47.619 0.00 0.00 0.00 2.18
3120 5974 4.020928 TCAATTGTGACGAGCCTAACCTTA 60.021 41.667 5.13 0.00 0.00 2.69
3121 5975 3.074412 CAATTGTGACGAGCCTAACCTT 58.926 45.455 0.00 0.00 0.00 3.50
3122 5976 2.301870 TCAATTGTGACGAGCCTAACCT 59.698 45.455 5.13 0.00 0.00 3.50
3123 5977 2.695359 TCAATTGTGACGAGCCTAACC 58.305 47.619 5.13 0.00 0.00 2.85
3124 5978 4.451096 TCTTTCAATTGTGACGAGCCTAAC 59.549 41.667 5.13 0.00 31.90 2.34
3125 5979 4.637276 TCTTTCAATTGTGACGAGCCTAA 58.363 39.130 5.13 0.00 31.90 2.69
3126 5980 4.245660 CTCTTTCAATTGTGACGAGCCTA 58.754 43.478 5.13 0.00 31.90 3.93
3127 5981 3.070018 CTCTTTCAATTGTGACGAGCCT 58.930 45.455 5.13 0.00 31.90 4.58
3128 5982 2.160417 CCTCTTTCAATTGTGACGAGCC 59.840 50.000 5.13 0.00 33.32 4.70
3129 5983 2.413371 GCCTCTTTCAATTGTGACGAGC 60.413 50.000 5.13 0.25 33.32 5.03
3130 5984 3.070018 AGCCTCTTTCAATTGTGACGAG 58.930 45.455 5.13 7.94 33.96 4.18
3131 5985 3.126001 AGCCTCTTTCAATTGTGACGA 57.874 42.857 5.13 0.00 31.90 4.20
3132 5986 3.904136 AAGCCTCTTTCAATTGTGACG 57.096 42.857 5.13 0.00 31.90 4.35
3133 5987 4.209911 GCAAAAGCCTCTTTCAATTGTGAC 59.790 41.667 5.13 0.00 31.90 3.67
3134 5988 4.099881 AGCAAAAGCCTCTTTCAATTGTGA 59.900 37.500 5.13 2.31 0.00 3.58
3135 5989 4.210537 CAGCAAAAGCCTCTTTCAATTGTG 59.789 41.667 5.13 0.00 0.00 3.33
3136 5990 4.141869 ACAGCAAAAGCCTCTTTCAATTGT 60.142 37.500 5.13 0.00 0.00 2.71
3137 5991 4.374399 ACAGCAAAAGCCTCTTTCAATTG 58.626 39.130 0.00 0.00 0.00 2.32
3138 5992 4.677673 ACAGCAAAAGCCTCTTTCAATT 57.322 36.364 0.00 0.00 0.00 2.32
3139 5993 5.072741 TCTACAGCAAAAGCCTCTTTCAAT 58.927 37.500 0.00 0.00 0.00 2.57
3140 5994 4.460263 TCTACAGCAAAAGCCTCTTTCAA 58.540 39.130 0.00 0.00 0.00 2.69
3141 5995 4.085357 TCTACAGCAAAAGCCTCTTTCA 57.915 40.909 0.00 0.00 0.00 2.69
3142 5996 5.438761 TTTCTACAGCAAAAGCCTCTTTC 57.561 39.130 0.00 0.00 0.00 2.62
3143 5997 6.410942 AATTTCTACAGCAAAAGCCTCTTT 57.589 33.333 0.00 0.00 0.00 2.52
3144 5998 6.410942 AAATTTCTACAGCAAAAGCCTCTT 57.589 33.333 0.00 0.00 0.00 2.85
3145 5999 6.410942 AAAATTTCTACAGCAAAAGCCTCT 57.589 33.333 0.00 0.00 0.00 3.69
3146 6000 5.343325 CGAAAATTTCTACAGCAAAAGCCTC 59.657 40.000 4.09 0.00 0.00 4.70
3147 6001 5.222631 CGAAAATTTCTACAGCAAAAGCCT 58.777 37.500 4.09 0.00 0.00 4.58
3148 6002 4.143326 GCGAAAATTTCTACAGCAAAAGCC 60.143 41.667 4.09 0.00 0.00 4.35
3149 6003 4.143326 GGCGAAAATTTCTACAGCAAAAGC 60.143 41.667 4.09 0.00 0.00 3.51
3150 6004 5.222631 AGGCGAAAATTTCTACAGCAAAAG 58.777 37.500 4.09 0.00 0.00 2.27
3151 6005 5.195001 AGGCGAAAATTTCTACAGCAAAA 57.805 34.783 4.09 0.00 0.00 2.44
3152 6006 4.846779 AGGCGAAAATTTCTACAGCAAA 57.153 36.364 4.09 0.00 0.00 3.68
3153 6007 5.950758 TTAGGCGAAAATTTCTACAGCAA 57.049 34.783 4.09 0.00 0.00 3.91
3154 6008 5.472137 ACTTTAGGCGAAAATTTCTACAGCA 59.528 36.000 4.09 0.00 0.00 4.41
3155 6009 5.795441 CACTTTAGGCGAAAATTTCTACAGC 59.205 40.000 4.09 0.00 0.00 4.40
3156 6010 6.797033 CACACTTTAGGCGAAAATTTCTACAG 59.203 38.462 4.09 0.00 0.00 2.74
3157 6011 6.293735 CCACACTTTAGGCGAAAATTTCTACA 60.294 38.462 4.09 0.00 0.00 2.74
3158 6012 6.084277 CCACACTTTAGGCGAAAATTTCTAC 58.916 40.000 4.09 0.00 0.00 2.59
3159 6013 5.335348 GCCACACTTTAGGCGAAAATTTCTA 60.335 40.000 4.09 0.00 41.70 2.10
3160 6014 4.558697 GCCACACTTTAGGCGAAAATTTCT 60.559 41.667 4.09 0.00 41.70 2.52
3161 6015 3.673338 GCCACACTTTAGGCGAAAATTTC 59.327 43.478 0.00 0.00 41.70 2.17
3162 6016 3.649073 GCCACACTTTAGGCGAAAATTT 58.351 40.909 0.00 0.00 41.70 1.82
3163 6017 3.297830 GCCACACTTTAGGCGAAAATT 57.702 42.857 0.00 0.00 41.70 1.82
3171 6025 3.915437 AAATGAACGCCACACTTTAGG 57.085 42.857 0.00 0.00 0.00 2.69
3172 6026 4.675114 GTCAAAATGAACGCCACACTTTAG 59.325 41.667 0.00 0.00 0.00 1.85
3173 6027 4.498345 GGTCAAAATGAACGCCACACTTTA 60.498 41.667 0.00 0.00 0.00 1.85
3174 6028 3.443976 GTCAAAATGAACGCCACACTTT 58.556 40.909 0.00 0.00 0.00 2.66
3175 6029 2.223711 GGTCAAAATGAACGCCACACTT 60.224 45.455 0.00 0.00 0.00 3.16
3176 6030 1.336755 GGTCAAAATGAACGCCACACT 59.663 47.619 0.00 0.00 0.00 3.55
3177 6031 1.766069 GGTCAAAATGAACGCCACAC 58.234 50.000 0.00 0.00 0.00 3.82
3184 6038 0.038618 GTGGGGCGGTCAAAATGAAC 60.039 55.000 0.00 0.00 0.00 3.18
3185 6039 0.178975 AGTGGGGCGGTCAAAATGAA 60.179 50.000 0.00 0.00 0.00 2.57
3186 6040 0.178975 AAGTGGGGCGGTCAAAATGA 60.179 50.000 0.00 0.00 0.00 2.57
3187 6041 0.678950 AAAGTGGGGCGGTCAAAATG 59.321 50.000 0.00 0.00 0.00 2.32
3188 6042 0.678950 CAAAGTGGGGCGGTCAAAAT 59.321 50.000 0.00 0.00 0.00 1.82
3189 6043 0.684805 ACAAAGTGGGGCGGTCAAAA 60.685 50.000 0.00 0.00 0.00 2.44
3190 6044 1.076632 ACAAAGTGGGGCGGTCAAA 60.077 52.632 0.00 0.00 0.00 2.69
3191 6045 1.826054 CACAAAGTGGGGCGGTCAA 60.826 57.895 0.00 0.00 0.00 3.18
3192 6046 2.203280 CACAAAGTGGGGCGGTCA 60.203 61.111 0.00 0.00 0.00 4.02
3214 6068 2.741486 TAAACAGAGGCGGGTGTGGC 62.741 60.000 0.00 0.00 0.00 5.01
3215 6069 0.953960 GTAAACAGAGGCGGGTGTGG 60.954 60.000 0.00 0.00 0.00 4.17
3216 6070 1.289109 CGTAAACAGAGGCGGGTGTG 61.289 60.000 0.00 0.00 0.00 3.82
3217 6071 1.005394 CGTAAACAGAGGCGGGTGT 60.005 57.895 0.00 0.00 0.00 4.16
3218 6072 2.388232 GCGTAAACAGAGGCGGGTG 61.388 63.158 0.00 0.00 0.00 4.61
3219 6073 2.047560 GCGTAAACAGAGGCGGGT 60.048 61.111 0.00 0.00 0.00 5.28
3220 6074 3.186047 CGCGTAAACAGAGGCGGG 61.186 66.667 0.00 0.00 46.85 6.13
3223 6077 3.023591 GCCACGCGTAAACAGAGGC 62.024 63.158 13.44 15.75 0.00 4.70
3224 6078 1.225376 TTGCCACGCGTAAACAGAGG 61.225 55.000 13.44 8.52 0.00 3.69
3225 6079 0.584396 TTTGCCACGCGTAAACAGAG 59.416 50.000 13.44 0.00 0.00 3.35
3226 6080 0.305313 GTTTGCCACGCGTAAACAGA 59.695 50.000 24.06 11.52 44.04 3.41
3227 6081 0.306533 AGTTTGCCACGCGTAAACAG 59.693 50.000 28.18 11.79 46.22 3.16
3228 6082 0.028242 CAGTTTGCCACGCGTAAACA 59.972 50.000 28.18 18.06 46.22 2.83
3229 6083 0.305313 TCAGTTTGCCACGCGTAAAC 59.695 50.000 22.39 22.39 44.71 2.01
3230 6084 0.584396 CTCAGTTTGCCACGCGTAAA 59.416 50.000 13.44 6.49 0.00 2.01
3231 6085 1.837538 GCTCAGTTTGCCACGCGTAA 61.838 55.000 13.44 0.00 0.00 3.18
3232 6086 2.314647 GCTCAGTTTGCCACGCGTA 61.315 57.895 13.44 0.00 0.00 4.42
3233 6087 3.649986 GCTCAGTTTGCCACGCGT 61.650 61.111 5.58 5.58 0.00 6.01
3234 6088 4.724697 CGCTCAGTTTGCCACGCG 62.725 66.667 3.53 3.53 34.50 6.01
3240 6094 2.050077 GTTGGGCGCTCAGTTTGC 60.050 61.111 11.23 0.00 0.00 3.68
3241 6095 1.733402 TTGGTTGGGCGCTCAGTTTG 61.733 55.000 11.23 0.00 0.00 2.93
3242 6096 1.040339 TTTGGTTGGGCGCTCAGTTT 61.040 50.000 11.23 0.00 0.00 2.66
3243 6097 1.454847 TTTGGTTGGGCGCTCAGTT 60.455 52.632 11.23 0.00 0.00 3.16
3244 6098 2.193536 GTTTGGTTGGGCGCTCAGT 61.194 57.895 11.23 0.00 0.00 3.41
3245 6099 2.133742 CTGTTTGGTTGGGCGCTCAG 62.134 60.000 11.23 0.00 0.00 3.35
3246 6100 2.124109 TGTTTGGTTGGGCGCTCA 60.124 55.556 5.44 5.44 0.00 4.26
3247 6101 2.644992 CTGTTTGGTTGGGCGCTC 59.355 61.111 7.64 2.47 0.00 5.03
3248 6102 3.605664 GCTGTTTGGTTGGGCGCT 61.606 61.111 7.64 0.00 0.00 5.92
3249 6103 4.662961 GGCTGTTTGGTTGGGCGC 62.663 66.667 0.00 0.00 0.00 6.53
3250 6104 3.989787 GGGCTGTTTGGTTGGGCG 61.990 66.667 0.00 0.00 0.00 6.13
3251 6105 3.625897 GGGGCTGTTTGGTTGGGC 61.626 66.667 0.00 0.00 0.00 5.36
3252 6106 2.123077 TGGGGCTGTTTGGTTGGG 60.123 61.111 0.00 0.00 0.00 4.12
3253 6107 2.871253 GCTGGGGCTGTTTGGTTGG 61.871 63.158 0.00 0.00 35.22 3.77
3254 6108 2.736531 GCTGGGGCTGTTTGGTTG 59.263 61.111 0.00 0.00 35.22 3.77
3255 6109 2.912025 CGCTGGGGCTGTTTGGTT 60.912 61.111 0.00 0.00 36.09 3.67
3256 6110 4.204028 ACGCTGGGGCTGTTTGGT 62.204 61.111 0.00 0.00 36.09 3.67
3257 6111 3.673484 CACGCTGGGGCTGTTTGG 61.673 66.667 0.00 0.00 36.09 3.28
3258 6112 4.347453 GCACGCTGGGGCTGTTTG 62.347 66.667 0.00 0.00 36.09 2.93
3259 6113 4.586235 AGCACGCTGGGGCTGTTT 62.586 61.111 6.85 0.00 39.30 2.83
3267 6121 2.745100 AGCATGACAGCACGCTGG 60.745 61.111 22.22 6.34 42.75 4.85
3268 6122 2.783275 GAGCATGACAGCACGCTG 59.217 61.111 17.29 17.29 44.64 5.18
3274 6128 1.391485 CACAAGTACGAGCATGACAGC 59.609 52.381 0.00 0.00 0.00 4.40
3281 6135 0.673333 CATGGGCACAAGTACGAGCA 60.673 55.000 0.00 0.00 0.00 4.26
3342 6202 4.331443 AGGTTCAAAACACGAAAATTTGCC 59.669 37.500 0.00 0.00 34.77 4.52
3343 6203 5.463499 AGGTTCAAAACACGAAAATTTGC 57.537 34.783 0.00 0.00 34.77 3.68
3344 6204 9.256715 GTAAAAGGTTCAAAACACGAAAATTTG 57.743 29.630 0.00 0.00 35.81 2.32
3345 6205 9.210329 AGTAAAAGGTTCAAAACACGAAAATTT 57.790 25.926 0.00 0.00 0.00 1.82
3346 6206 8.766000 AGTAAAAGGTTCAAAACACGAAAATT 57.234 26.923 0.00 0.00 0.00 1.82
3368 6228 9.268282 GGGGTCAGATCCTGAATTTATATAGTA 57.732 37.037 0.00 0.00 42.46 1.82
3369 6229 7.093289 CGGGGTCAGATCCTGAATTTATATAGT 60.093 40.741 1.58 0.00 42.46 2.12
3370 6230 7.268586 CGGGGTCAGATCCTGAATTTATATAG 58.731 42.308 1.58 0.00 42.46 1.31
3371 6231 6.156256 CCGGGGTCAGATCCTGAATTTATATA 59.844 42.308 10.57 0.00 42.46 0.86
3372 6232 5.045578 CCGGGGTCAGATCCTGAATTTATAT 60.046 44.000 10.57 0.00 42.46 0.86
3373 6233 4.286032 CCGGGGTCAGATCCTGAATTTATA 59.714 45.833 10.57 0.00 42.46 0.98
3374 6234 3.073062 CCGGGGTCAGATCCTGAATTTAT 59.927 47.826 10.57 0.00 42.46 1.40
3375 6235 2.438021 CCGGGGTCAGATCCTGAATTTA 59.562 50.000 10.57 0.00 42.46 1.40
3376 6236 1.212935 CCGGGGTCAGATCCTGAATTT 59.787 52.381 10.57 0.00 42.46 1.82
3377 6237 0.839946 CCGGGGTCAGATCCTGAATT 59.160 55.000 10.57 0.00 42.46 2.17
3378 6238 0.326618 ACCGGGGTCAGATCCTGAAT 60.327 55.000 10.57 0.00 42.46 2.57
3379 6239 0.546747 AACCGGGGTCAGATCCTGAA 60.547 55.000 10.57 0.00 42.46 3.02
3380 6240 1.080354 AACCGGGGTCAGATCCTGA 59.920 57.895 10.57 0.00 38.25 3.86
3381 6241 1.221840 CAACCGGGGTCAGATCCTG 59.778 63.158 6.32 0.68 0.00 3.86
3382 6242 0.546747 TTCAACCGGGGTCAGATCCT 60.547 55.000 6.32 0.00 0.00 3.24
3383 6243 0.326927 TTTCAACCGGGGTCAGATCC 59.673 55.000 6.32 0.00 0.00 3.36
3384 6244 2.194201 TTTTCAACCGGGGTCAGATC 57.806 50.000 6.32 0.00 0.00 2.75
3385 6245 2.668144 TTTTTCAACCGGGGTCAGAT 57.332 45.000 6.32 0.00 0.00 2.90
3413 6273 6.484977 CCTGGCAGTAAGAAAAAGGATCTATC 59.515 42.308 14.43 0.00 0.00 2.08
3414 6274 6.360618 CCTGGCAGTAAGAAAAAGGATCTAT 58.639 40.000 14.43 0.00 0.00 1.98
3415 6275 5.339200 CCCTGGCAGTAAGAAAAAGGATCTA 60.339 44.000 14.43 0.00 0.00 1.98
3416 6276 4.568592 CCCTGGCAGTAAGAAAAAGGATCT 60.569 45.833 14.43 0.00 0.00 2.75
3417 6277 3.696548 CCCTGGCAGTAAGAAAAAGGATC 59.303 47.826 14.43 0.00 0.00 3.36
3418 6278 3.076032 ACCCTGGCAGTAAGAAAAAGGAT 59.924 43.478 14.43 0.00 0.00 3.24
3419 6279 2.445525 ACCCTGGCAGTAAGAAAAAGGA 59.554 45.455 14.43 0.00 0.00 3.36
3420 6280 2.876581 ACCCTGGCAGTAAGAAAAAGG 58.123 47.619 14.43 6.43 0.00 3.11
3421 6281 4.584743 AGAAACCCTGGCAGTAAGAAAAAG 59.415 41.667 14.43 0.00 0.00 2.27
3422 6282 4.340950 CAGAAACCCTGGCAGTAAGAAAAA 59.659 41.667 14.43 0.00 39.23 1.94
3423 6283 3.888930 CAGAAACCCTGGCAGTAAGAAAA 59.111 43.478 14.43 0.00 39.23 2.29
3424 6284 3.486383 CAGAAACCCTGGCAGTAAGAAA 58.514 45.455 14.43 0.00 39.23 2.52
3425 6285 3.140325 CAGAAACCCTGGCAGTAAGAA 57.860 47.619 14.43 0.00 39.23 2.52
3426 6286 2.859165 CAGAAACCCTGGCAGTAAGA 57.141 50.000 14.43 0.00 39.23 2.10
3435 6295 0.673644 CACTACCGCCAGAAACCCTG 60.674 60.000 0.00 0.00 42.55 4.45
3436 6296 1.125711 ACACTACCGCCAGAAACCCT 61.126 55.000 0.00 0.00 0.00 4.34
3437 6297 0.250597 AACACTACCGCCAGAAACCC 60.251 55.000 0.00 0.00 0.00 4.11
3438 6298 2.028748 TCTAACACTACCGCCAGAAACC 60.029 50.000 0.00 0.00 0.00 3.27
3439 6299 2.991866 GTCTAACACTACCGCCAGAAAC 59.008 50.000 0.00 0.00 0.00 2.78
3440 6300 2.629137 TGTCTAACACTACCGCCAGAAA 59.371 45.455 0.00 0.00 0.00 2.52
3441 6301 2.230508 CTGTCTAACACTACCGCCAGAA 59.769 50.000 0.00 0.00 0.00 3.02
3442 6302 1.816835 CTGTCTAACACTACCGCCAGA 59.183 52.381 0.00 0.00 0.00 3.86
3443 6303 1.135083 CCTGTCTAACACTACCGCCAG 60.135 57.143 0.00 0.00 0.00 4.85
3444 6304 0.892755 CCTGTCTAACACTACCGCCA 59.107 55.000 0.00 0.00 0.00 5.69
3445 6305 0.459759 GCCTGTCTAACACTACCGCC 60.460 60.000 0.00 0.00 0.00 6.13
3446 6306 0.531200 AGCCTGTCTAACACTACCGC 59.469 55.000 0.00 0.00 0.00 5.68
3447 6307 2.098770 GGTAGCCTGTCTAACACTACCG 59.901 54.545 9.72 0.00 37.78 4.02
3448 6308 2.098770 CGGTAGCCTGTCTAACACTACC 59.901 54.545 13.16 13.16 41.11 3.18
3449 6309 2.479219 GCGGTAGCCTGTCTAACACTAC 60.479 54.545 0.00 0.00 34.60 2.73
3450 6310 1.747355 GCGGTAGCCTGTCTAACACTA 59.253 52.381 0.00 0.00 34.60 2.74
3451 6311 0.531200 GCGGTAGCCTGTCTAACACT 59.469 55.000 0.00 0.00 34.60 3.55
3452 6312 3.046280 GCGGTAGCCTGTCTAACAC 57.954 57.895 0.00 0.00 34.60 3.32
3471 6331 3.854669 CTACCGCCAGCCTCCCTG 61.855 72.222 0.00 0.00 41.41 4.45
3478 6338 2.325393 ATTACTGCCCTACCGCCAGC 62.325 60.000 0.00 0.00 0.00 4.85
3479 6339 0.249911 GATTACTGCCCTACCGCCAG 60.250 60.000 0.00 0.00 0.00 4.85
3480 6340 1.692173 GGATTACTGCCCTACCGCCA 61.692 60.000 0.00 0.00 0.00 5.69
3481 6341 1.070957 GGATTACTGCCCTACCGCC 59.929 63.158 0.00 0.00 0.00 6.13
3482 6342 0.532196 GTGGATTACTGCCCTACCGC 60.532 60.000 0.00 0.00 0.00 5.68
3483 6343 0.249322 CGTGGATTACTGCCCTACCG 60.249 60.000 0.00 0.00 0.00 4.02
3484 6344 0.828677 ACGTGGATTACTGCCCTACC 59.171 55.000 0.00 0.00 0.00 3.18
3485 6345 1.479323 TGACGTGGATTACTGCCCTAC 59.521 52.381 0.00 0.00 0.00 3.18
3486 6346 1.754803 CTGACGTGGATTACTGCCCTA 59.245 52.381 0.00 0.00 0.00 3.53
3487 6347 0.537188 CTGACGTGGATTACTGCCCT 59.463 55.000 0.00 0.00 0.00 5.19
3488 6348 1.090052 GCTGACGTGGATTACTGCCC 61.090 60.000 0.00 0.00 0.00 5.36
3489 6349 0.391130 TGCTGACGTGGATTACTGCC 60.391 55.000 0.00 0.00 0.00 4.85
3490 6350 0.721718 GTGCTGACGTGGATTACTGC 59.278 55.000 0.00 0.00 0.00 4.40
3491 6351 0.992072 CGTGCTGACGTGGATTACTG 59.008 55.000 0.00 0.00 40.91 2.74
3492 6352 3.418675 CGTGCTGACGTGGATTACT 57.581 52.632 0.00 0.00 40.91 2.24
3529 6389 3.834799 GTAGGGTGCGACGGAGGG 61.835 72.222 0.00 0.00 0.00 4.30
3530 6390 3.834799 GGTAGGGTGCGACGGAGG 61.835 72.222 0.00 0.00 0.00 4.30
3531 6391 4.189188 CGGTAGGGTGCGACGGAG 62.189 72.222 0.00 0.00 0.00 4.63
3535 6395 4.814294 CTGGCGGTAGGGTGCGAC 62.814 72.222 0.00 0.00 0.00 5.19
3561 6421 2.202810 GCTCAGACAGGCTACCGC 60.203 66.667 0.00 0.00 0.00 5.68
3562 6422 2.496817 GGCTCAGACAGGCTACCG 59.503 66.667 0.00 0.00 44.64 4.02
3568 6428 2.496817 GCGGTAGGCTCAGACAGG 59.503 66.667 0.00 0.00 39.11 4.00
3569 6429 2.290122 CTGGCGGTAGGCTCAGACAG 62.290 65.000 5.45 5.45 40.35 3.51
3570 6430 2.283604 TGGCGGTAGGCTCAGACA 60.284 61.111 0.00 0.00 44.18 3.41
3571 6431 2.496817 CTGGCGGTAGGCTCAGAC 59.503 66.667 0.00 0.00 40.35 3.51
3572 6432 3.461773 GCTGGCGGTAGGCTCAGA 61.462 66.667 4.48 0.00 40.35 3.27
3573 6433 4.880537 CGCTGGCGGTAGGCTCAG 62.881 72.222 7.12 0.00 44.18 3.35
3575 6435 4.874977 GACGCTGGCGGTAGGCTC 62.875 72.222 18.99 2.87 44.69 4.70
3593 6453 4.143333 CCTGACCCTACCGCCACG 62.143 72.222 0.00 0.00 0.00 4.94
3594 6454 3.782443 CCCTGACCCTACCGCCAC 61.782 72.222 0.00 0.00 0.00 5.01
3597 6457 2.552231 AATTGCCCTGACCCTACCGC 62.552 60.000 0.00 0.00 0.00 5.68
3598 6458 0.834612 TAATTGCCCTGACCCTACCG 59.165 55.000 0.00 0.00 0.00 4.02
3599 6459 3.595190 AATAATTGCCCTGACCCTACC 57.405 47.619 0.00 0.00 0.00 3.18
3600 6460 3.564225 CGAAATAATTGCCCTGACCCTAC 59.436 47.826 0.00 0.00 0.00 3.18
3601 6461 3.815809 CGAAATAATTGCCCTGACCCTA 58.184 45.455 0.00 0.00 0.00 3.53
3602 6462 2.654863 CGAAATAATTGCCCTGACCCT 58.345 47.619 0.00 0.00 0.00 4.34
3603 6463 1.067060 GCGAAATAATTGCCCTGACCC 59.933 52.381 0.00 0.00 0.00 4.46
3604 6464 1.067060 GGCGAAATAATTGCCCTGACC 59.933 52.381 0.00 0.00 43.06 4.02
3605 6465 2.492019 GGCGAAATAATTGCCCTGAC 57.508 50.000 0.00 0.00 43.06 3.51
3610 6470 2.190161 GTTTCGGGCGAAATAATTGCC 58.810 47.619 0.00 0.00 44.52 4.52
3611 6471 2.190161 GGTTTCGGGCGAAATAATTGC 58.810 47.619 0.00 0.00 44.52 3.56
3612 6472 2.480587 GGGGTTTCGGGCGAAATAATTG 60.481 50.000 0.00 0.00 44.52 2.32
3613 6473 1.752498 GGGGTTTCGGGCGAAATAATT 59.248 47.619 0.00 0.00 44.52 1.40
3614 6474 1.395635 GGGGTTTCGGGCGAAATAAT 58.604 50.000 0.00 0.00 44.52 1.28
3615 6475 1.025647 CGGGGTTTCGGGCGAAATAA 61.026 55.000 0.00 0.00 44.52 1.40
3616 6476 1.449956 CGGGGTTTCGGGCGAAATA 60.450 57.895 0.00 0.00 44.52 1.40
3617 6477 2.748647 CGGGGTTTCGGGCGAAAT 60.749 61.111 0.00 0.00 44.52 2.17
3625 6485 4.653888 AAGGGGTGCGGGGTTTCG 62.654 66.667 0.00 0.00 0.00 3.46
3626 6486 2.675423 GAAGGGGTGCGGGGTTTC 60.675 66.667 0.00 0.00 0.00 2.78
3627 6487 4.295199 GGAAGGGGTGCGGGGTTT 62.295 66.667 0.00 0.00 0.00 3.27
3649 6509 3.622060 ATGAAACTGCCGACGGGGG 62.622 63.158 17.22 0.00 35.78 5.40
3650 6510 2.046314 ATGAAACTGCCGACGGGG 60.046 61.111 17.22 0.00 39.58 5.73
3651 6511 0.673644 AAGATGAAACTGCCGACGGG 60.674 55.000 17.22 1.81 0.00 5.28
3652 6512 1.156736 AAAGATGAAACTGCCGACGG 58.843 50.000 10.29 10.29 0.00 4.79
3653 6513 2.032030 ACAAAAGATGAAACTGCCGACG 60.032 45.455 0.00 0.00 0.00 5.12
3654 6514 3.626028 ACAAAAGATGAAACTGCCGAC 57.374 42.857 0.00 0.00 0.00 4.79
3655 6515 3.004315 GGAACAAAAGATGAAACTGCCGA 59.996 43.478 0.00 0.00 0.00 5.54
3656 6516 3.308530 GGAACAAAAGATGAAACTGCCG 58.691 45.455 0.00 0.00 0.00 5.69
3657 6517 3.554960 GGGGAACAAAAGATGAAACTGCC 60.555 47.826 0.00 0.00 0.00 4.85
3658 6518 3.069443 TGGGGAACAAAAGATGAAACTGC 59.931 43.478 0.00 0.00 0.00 4.40
3659 6519 4.935352 TGGGGAACAAAAGATGAAACTG 57.065 40.909 0.00 0.00 0.00 3.16
3660 6520 4.962362 AGTTGGGGAACAAAAGATGAAACT 59.038 37.500 0.00 0.00 41.58 2.66
3661 6521 5.276461 AGTTGGGGAACAAAAGATGAAAC 57.724 39.130 0.00 0.00 41.58 2.78
3662 6522 4.037446 CGAGTTGGGGAACAAAAGATGAAA 59.963 41.667 0.00 0.00 41.58 2.69
3663 6523 3.568007 CGAGTTGGGGAACAAAAGATGAA 59.432 43.478 0.00 0.00 41.58 2.57
3664 6524 3.146066 CGAGTTGGGGAACAAAAGATGA 58.854 45.455 0.00 0.00 41.58 2.92
3665 6525 2.351738 GCGAGTTGGGGAACAAAAGATG 60.352 50.000 0.00 0.00 41.58 2.90
3666 6526 1.886542 GCGAGTTGGGGAACAAAAGAT 59.113 47.619 0.00 0.00 41.58 2.40
3667 6527 1.314730 GCGAGTTGGGGAACAAAAGA 58.685 50.000 0.00 0.00 41.58 2.52
3668 6528 0.313987 GGCGAGTTGGGGAACAAAAG 59.686 55.000 0.00 0.00 41.58 2.27
3669 6529 1.110518 GGGCGAGTTGGGGAACAAAA 61.111 55.000 0.00 0.00 41.58 2.44
3670 6530 1.529713 GGGCGAGTTGGGGAACAAA 60.530 57.895 0.00 0.00 41.58 2.83
3671 6531 2.114411 GGGCGAGTTGGGGAACAA 59.886 61.111 0.00 0.00 36.54 2.83
3672 6532 3.961414 GGGGCGAGTTGGGGAACA 61.961 66.667 0.00 0.00 0.00 3.18
3673 6533 3.623703 GAGGGGCGAGTTGGGGAAC 62.624 68.421 0.00 0.00 0.00 3.62
3674 6534 3.327404 GAGGGGCGAGTTGGGGAA 61.327 66.667 0.00 0.00 0.00 3.97
3675 6535 4.332543 AGAGGGGCGAGTTGGGGA 62.333 66.667 0.00 0.00 0.00 4.81
3676 6536 3.787001 GAGAGGGGCGAGTTGGGG 61.787 72.222 0.00 0.00 0.00 4.96
3677 6537 2.685380 AGAGAGGGGCGAGTTGGG 60.685 66.667 0.00 0.00 0.00 4.12
3678 6538 2.726351 GGAGAGAGGGGCGAGTTGG 61.726 68.421 0.00 0.00 0.00 3.77
3679 6539 2.726351 GGGAGAGAGGGGCGAGTTG 61.726 68.421 0.00 0.00 0.00 3.16
3680 6540 2.364448 GGGAGAGAGGGGCGAGTT 60.364 66.667 0.00 0.00 0.00 3.01
3681 6541 3.351885 AGGGAGAGAGGGGCGAGT 61.352 66.667 0.00 0.00 0.00 4.18
3682 6542 2.520741 GAGGGAGAGAGGGGCGAG 60.521 72.222 0.00 0.00 0.00 5.03
3683 6543 3.024356 AGAGGGAGAGAGGGGCGA 61.024 66.667 0.00 0.00 0.00 5.54
3684 6544 2.520741 GAGAGGGAGAGAGGGGCG 60.521 72.222 0.00 0.00 0.00 6.13
3685 6545 1.152546 GAGAGAGGGAGAGAGGGGC 60.153 68.421 0.00 0.00 0.00 5.80
3686 6546 0.859760 ATGAGAGAGGGAGAGAGGGG 59.140 60.000 0.00 0.00 0.00 4.79
3687 6547 1.782752 AGATGAGAGAGGGAGAGAGGG 59.217 57.143 0.00 0.00 0.00 4.30
3688 6548 3.146104 GAGATGAGAGAGGGAGAGAGG 57.854 57.143 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.