Multiple sequence alignment - TraesCS6B01G102900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G102900 chr6B 100.000 2353 0 0 1 2353 80960361 80962713 0.000000e+00 4346.0
1 TraesCS6B01G102900 chr6B 95.536 448 15 2 1900 2346 80978850 80979293 0.000000e+00 712.0
2 TraesCS6B01G102900 chr6B 79.892 925 67 39 531 1405 80969441 80970296 3.390000e-158 568.0
3 TraesCS6B01G102900 chr6B 94.006 317 17 1 1 315 150776588 150776272 1.640000e-131 479.0
4 TraesCS6B01G102900 chr6B 93.103 319 22 0 1 319 485549643 485549325 3.540000e-128 468.0
5 TraesCS6B01G102900 chr6B 83.836 464 35 17 1465 1915 80977294 80977730 2.820000e-109 405.0
6 TraesCS6B01G102900 chrUn 88.032 752 51 24 976 1706 27022450 27023183 0.000000e+00 854.0
7 TraesCS6B01G102900 chrUn 87.947 755 52 24 976 1709 27157795 27157059 0.000000e+00 854.0
8 TraesCS6B01G102900 chrUn 88.921 343 23 5 1770 2102 27035509 27035846 2.180000e-110 409.0
9 TraesCS6B01G102900 chrUn 91.923 260 14 3 2093 2346 27037144 27037402 8.000000e-95 357.0
10 TraesCS6B01G102900 chrUn 87.192 203 12 7 530 727 27021990 27022183 3.940000e-53 219.0
11 TraesCS6B01G102900 chrUn 87.192 203 12 7 530 727 27158255 27158062 3.940000e-53 219.0
12 TraesCS6B01G102900 chrUn 92.157 51 4 0 1707 1757 27034094 27034144 3.240000e-09 73.1
13 TraesCS6B01G102900 chr2B 95.597 318 13 1 1 317 796286301 796286618 2.090000e-140 508.0
14 TraesCS6B01G102900 chr7B 94.603 315 16 1 1 315 369876600 369876913 9.780000e-134 486.0
15 TraesCS6B01G102900 chr6A 90.281 391 10 8 981 1366 46973150 46972783 9.780000e-134 486.0
16 TraesCS6B01G102900 chr6A 86.975 238 28 2 1465 1702 46972730 46972496 4.990000e-67 265.0
17 TraesCS6B01G102900 chr5B 92.722 316 21 2 3 317 388309541 388309855 2.760000e-124 455.0
18 TraesCS6B01G102900 chr3B 91.875 320 24 2 1 318 809332232 809332551 1.660000e-121 446.0
19 TraesCS6B01G102900 chr1A 91.824 318 22 4 1 316 469648376 469648691 7.720000e-120 440.0
20 TraesCS6B01G102900 chr1A 81.176 425 52 14 992 1402 32451397 32451807 1.360000e-82 316.0
21 TraesCS6B01G102900 chr1A 80.476 420 52 16 992 1398 32302214 32302616 6.360000e-76 294.0
22 TraesCS6B01G102900 chr2A 91.562 320 22 4 1 318 569287276 569287592 9.990000e-119 436.0
23 TraesCS6B01G102900 chr2A 88.268 179 19 2 347 524 540055772 540055595 1.830000e-51 213.0
24 TraesCS6B01G102900 chr1B 91.304 322 23 2 1 322 669808042 669808358 3.590000e-118 435.0
25 TraesCS6B01G102900 chr1B 78.883 573 93 23 988 1550 51590104 51590658 1.720000e-96 363.0
26 TraesCS6B01G102900 chr1B 80.430 419 59 14 992 1403 51539014 51539416 4.920000e-77 298.0
27 TraesCS6B01G102900 chr1D 81.379 435 46 23 986 1403 33663825 33664241 2.920000e-84 322.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G102900 chr6B 80960361 80962713 2352 False 4346.0 4346 100.000000 1 2353 1 chr6B.!!$F1 2352
1 TraesCS6B01G102900 chr6B 80969441 80970296 855 False 568.0 568 79.892000 531 1405 1 chr6B.!!$F2 874
2 TraesCS6B01G102900 chr6B 80977294 80979293 1999 False 558.5 712 89.686000 1465 2346 2 chr6B.!!$F3 881
3 TraesCS6B01G102900 chrUn 27021990 27023183 1193 False 536.5 854 87.612000 530 1706 2 chrUn.!!$F1 1176
4 TraesCS6B01G102900 chrUn 27157059 27158255 1196 True 536.5 854 87.569500 530 1709 2 chrUn.!!$R1 1179
5 TraesCS6B01G102900 chrUn 27034094 27037402 3308 False 279.7 409 91.000333 1707 2346 3 chrUn.!!$F2 639
6 TraesCS6B01G102900 chr6A 46972496 46973150 654 True 375.5 486 88.628000 981 1702 2 chr6A.!!$R1 721
7 TraesCS6B01G102900 chr1B 51590104 51590658 554 False 363.0 363 78.883000 988 1550 1 chr1B.!!$F2 562

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
646 648 0.03392 CAGGCAGGGAAAAAGTTGGC 59.966 55.0 0.0 0.0 36.47 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2008 4700 0.033642 GGATCCAACGGTAGGCTAGC 59.966 60.0 13.62 13.62 0.0 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 8.782137 ATTATGTTAATTATGAAACTGGGCCT 57.218 30.769 4.53 0.00 0.00 5.19
36 37 8.602472 TTATGTTAATTATGAAACTGGGCCTT 57.398 30.769 4.53 0.00 0.00 4.35
37 38 6.926630 TGTTAATTATGAAACTGGGCCTTT 57.073 33.333 4.53 0.00 0.00 3.11
38 39 7.309770 TGTTAATTATGAAACTGGGCCTTTT 57.690 32.000 4.53 4.02 0.00 2.27
39 40 8.423906 TGTTAATTATGAAACTGGGCCTTTTA 57.576 30.769 4.53 0.00 0.00 1.52
40 41 8.871125 TGTTAATTATGAAACTGGGCCTTTTAA 58.129 29.630 4.53 0.00 0.00 1.52
41 42 9.366216 GTTAATTATGAAACTGGGCCTTTTAAG 57.634 33.333 4.53 0.00 0.00 1.85
42 43 7.553504 AATTATGAAACTGGGCCTTTTAAGT 57.446 32.000 4.53 0.00 0.00 2.24
43 44 4.871933 ATGAAACTGGGCCTTTTAAGTG 57.128 40.909 4.53 0.00 0.00 3.16
44 45 2.962421 TGAAACTGGGCCTTTTAAGTGG 59.038 45.455 4.53 0.00 0.00 4.00
50 51 3.489813 GCCTTTTAAGTGGCCGTTG 57.510 52.632 0.00 0.00 43.11 4.10
51 52 0.955905 GCCTTTTAAGTGGCCGTTGA 59.044 50.000 0.00 0.00 43.11 3.18
52 53 1.338655 GCCTTTTAAGTGGCCGTTGAA 59.661 47.619 0.00 0.00 43.11 2.69
53 54 2.860971 GCCTTTTAAGTGGCCGTTGAAC 60.861 50.000 0.00 0.00 43.11 3.18
54 55 2.287970 CCTTTTAAGTGGCCGTTGAACC 60.288 50.000 0.00 0.00 0.00 3.62
55 56 2.054232 TTTAAGTGGCCGTTGAACCA 57.946 45.000 0.00 0.00 0.00 3.67
56 57 1.600023 TTAAGTGGCCGTTGAACCAG 58.400 50.000 0.00 0.00 36.38 4.00
57 58 0.250553 TAAGTGGCCGTTGAACCAGG 60.251 55.000 0.00 0.00 36.38 4.45
58 59 2.976494 AAGTGGCCGTTGAACCAGGG 62.976 60.000 0.00 0.00 36.38 4.45
62 63 4.636435 CCGTTGAACCAGGGCCGT 62.636 66.667 0.00 0.00 0.00 5.68
63 64 2.593436 CGTTGAACCAGGGCCGTT 60.593 61.111 0.00 0.00 0.00 4.44
64 65 2.190841 CGTTGAACCAGGGCCGTTT 61.191 57.895 0.00 0.00 0.00 3.60
65 66 1.730451 CGTTGAACCAGGGCCGTTTT 61.730 55.000 0.00 0.00 0.00 2.43
66 67 0.249280 GTTGAACCAGGGCCGTTTTG 60.249 55.000 0.00 0.00 0.00 2.44
67 68 0.684805 TTGAACCAGGGCCGTTTTGT 60.685 50.000 0.00 0.00 0.00 2.83
68 69 1.362355 GAACCAGGGCCGTTTTGTG 59.638 57.895 0.00 0.00 0.00 3.33
69 70 2.082629 GAACCAGGGCCGTTTTGTGG 62.083 60.000 5.74 5.74 0.00 4.17
76 77 3.666253 CCGTTTTGTGGCCGACCC 61.666 66.667 0.00 0.00 33.59 4.46
77 78 3.666253 CGTTTTGTGGCCGACCCC 61.666 66.667 0.00 0.00 33.59 4.95
78 79 2.203437 GTTTTGTGGCCGACCCCT 60.203 61.111 0.00 0.00 33.59 4.79
79 80 1.073548 GTTTTGTGGCCGACCCCTA 59.926 57.895 0.00 0.00 33.59 3.53
80 81 0.323087 GTTTTGTGGCCGACCCCTAT 60.323 55.000 0.00 0.00 33.59 2.57
81 82 1.065272 GTTTTGTGGCCGACCCCTATA 60.065 52.381 0.00 0.00 33.59 1.31
82 83 1.513858 TTTGTGGCCGACCCCTATAT 58.486 50.000 0.00 0.00 33.59 0.86
83 84 2.402182 TTGTGGCCGACCCCTATATA 57.598 50.000 0.00 0.00 33.59 0.86
84 85 2.634639 TGTGGCCGACCCCTATATAT 57.365 50.000 0.00 0.00 33.59 0.86
85 86 2.184533 TGTGGCCGACCCCTATATATG 58.815 52.381 0.00 0.00 33.59 1.78
86 87 2.185387 GTGGCCGACCCCTATATATGT 58.815 52.381 0.00 0.00 33.59 2.29
87 88 2.570302 GTGGCCGACCCCTATATATGTT 59.430 50.000 0.00 0.00 33.59 2.71
88 89 3.008704 GTGGCCGACCCCTATATATGTTT 59.991 47.826 0.00 0.00 33.59 2.83
89 90 3.653836 TGGCCGACCCCTATATATGTTTT 59.346 43.478 0.00 0.00 33.59 2.43
90 91 4.845225 TGGCCGACCCCTATATATGTTTTA 59.155 41.667 0.00 0.00 33.59 1.52
91 92 5.489637 TGGCCGACCCCTATATATGTTTTAT 59.510 40.000 0.00 0.00 33.59 1.40
92 93 5.820947 GGCCGACCCCTATATATGTTTTATG 59.179 44.000 0.00 0.00 0.00 1.90
93 94 6.412214 GCCGACCCCTATATATGTTTTATGT 58.588 40.000 0.00 0.00 0.00 2.29
94 95 6.882678 GCCGACCCCTATATATGTTTTATGTT 59.117 38.462 0.00 0.00 0.00 2.71
95 96 7.392393 GCCGACCCCTATATATGTTTTATGTTT 59.608 37.037 0.00 0.00 0.00 2.83
96 97 9.292195 CCGACCCCTATATATGTTTTATGTTTT 57.708 33.333 0.00 0.00 0.00 2.43
168 169 2.219080 TTTTTATTCCCGTCCACCCC 57.781 50.000 0.00 0.00 0.00 4.95
169 170 0.035247 TTTTATTCCCGTCCACCCCG 60.035 55.000 0.00 0.00 0.00 5.73
170 171 1.912826 TTTATTCCCGTCCACCCCGG 61.913 60.000 0.00 0.00 45.07 5.73
178 179 2.605295 TCCACCCCGGACACGATT 60.605 61.111 0.73 0.00 44.60 3.34
179 180 2.218454 TCCACCCCGGACACGATTT 61.218 57.895 0.73 0.00 44.60 2.17
180 181 2.038269 CCACCCCGGACACGATTTG 61.038 63.158 0.73 0.00 44.60 2.32
181 182 2.038269 CACCCCGGACACGATTTGG 61.038 63.158 0.73 0.00 44.60 3.28
182 183 2.437716 CCCCGGACACGATTTGGG 60.438 66.667 0.73 0.00 44.60 4.12
183 184 2.437716 CCCGGACACGATTTGGGG 60.438 66.667 0.73 0.00 44.60 4.96
184 185 2.349755 CCGGACACGATTTGGGGT 59.650 61.111 0.00 0.00 44.60 4.95
185 186 2.038269 CCGGACACGATTTGGGGTG 61.038 63.158 0.00 0.00 44.60 4.61
186 187 2.686816 CGGACACGATTTGGGGTGC 61.687 63.158 0.00 0.00 44.60 5.01
187 188 2.686816 GGACACGATTTGGGGTGCG 61.687 63.158 0.00 0.00 37.68 5.34
188 189 2.671619 ACACGATTTGGGGTGCGG 60.672 61.111 0.00 0.00 37.68 5.69
189 190 4.114997 CACGATTTGGGGTGCGGC 62.115 66.667 0.00 0.00 0.00 6.53
218 219 4.444024 CGCACGCACGACCCAATG 62.444 66.667 0.00 0.00 34.06 2.82
219 220 4.101790 GCACGCACGACCCAATGG 62.102 66.667 0.00 0.00 37.80 3.16
220 221 2.358125 CACGCACGACCCAATGGA 60.358 61.111 0.00 0.00 34.81 3.41
221 222 2.358247 ACGCACGACCCAATGGAC 60.358 61.111 0.00 0.00 34.81 4.02
222 223 2.358125 CGCACGACCCAATGGACA 60.358 61.111 0.00 0.00 34.81 4.02
223 224 2.677003 CGCACGACCCAATGGACAC 61.677 63.158 0.00 0.00 34.81 3.67
224 225 1.599518 GCACGACCCAATGGACACA 60.600 57.895 0.00 0.00 34.81 3.72
225 226 1.577328 GCACGACCCAATGGACACAG 61.577 60.000 0.00 0.00 34.81 3.66
226 227 0.250295 CACGACCCAATGGACACAGT 60.250 55.000 0.00 0.00 34.81 3.55
227 228 0.034896 ACGACCCAATGGACACAGTC 59.965 55.000 0.00 0.00 34.81 3.51
228 229 1.014044 CGACCCAATGGACACAGTCG 61.014 60.000 12.18 12.18 40.76 4.18
229 230 0.673644 GACCCAATGGACACAGTCGG 60.674 60.000 0.00 0.00 32.65 4.79
230 231 1.125093 ACCCAATGGACACAGTCGGA 61.125 55.000 0.00 0.00 32.65 4.55
231 232 0.673644 CCCAATGGACACAGTCGGAC 60.674 60.000 0.00 0.00 32.65 4.79
232 233 0.034756 CCAATGGACACAGTCGGACA 59.965 55.000 11.27 0.00 32.65 4.02
233 234 1.148310 CAATGGACACAGTCGGACAC 58.852 55.000 11.27 0.00 32.65 3.67
234 235 0.319555 AATGGACACAGTCGGACACG 60.320 55.000 11.27 3.49 42.74 4.49
235 236 1.461091 ATGGACACAGTCGGACACGT 61.461 55.000 11.27 4.16 41.85 4.49
236 237 1.660575 GGACACAGTCGGACACGTG 60.661 63.158 21.86 21.86 41.85 4.49
237 238 2.279252 ACACAGTCGGACACGTGC 60.279 61.111 22.84 8.51 41.85 5.34
238 239 3.394874 CACAGTCGGACACGTGCG 61.395 66.667 17.22 12.54 45.95 5.34
245 246 2.358247 GGACACGTGCGAACCCAT 60.358 61.111 17.22 0.00 0.00 4.00
246 247 2.388232 GGACACGTGCGAACCCATC 61.388 63.158 17.22 2.44 0.00 3.51
278 279 1.474330 GGACAAATTCCGGCCAATCT 58.526 50.000 2.24 0.00 33.46 2.40
279 280 1.134946 GGACAAATTCCGGCCAATCTG 59.865 52.381 2.24 0.00 33.46 2.90
280 281 1.134946 GACAAATTCCGGCCAATCTGG 59.865 52.381 2.24 0.00 42.90 3.86
287 288 2.511600 GGCCAATCTGGACGTCCG 60.512 66.667 28.70 22.28 40.96 4.79
288 289 2.264794 GCCAATCTGGACGTCCGT 59.735 61.111 28.70 15.03 40.96 4.69
289 290 1.375523 GCCAATCTGGACGTCCGTT 60.376 57.895 28.70 19.79 40.96 4.44
290 291 0.953960 GCCAATCTGGACGTCCGTTT 60.954 55.000 28.70 19.76 40.96 3.60
291 292 0.796312 CCAATCTGGACGTCCGTTTG 59.204 55.000 28.70 27.10 40.96 2.93
292 293 0.796312 CAATCTGGACGTCCGTTTGG 59.204 55.000 28.70 14.66 39.43 3.28
293 294 0.321298 AATCTGGACGTCCGTTTGGG 60.321 55.000 28.70 14.06 39.43 4.12
294 295 2.180159 ATCTGGACGTCCGTTTGGGG 62.180 60.000 28.70 12.45 39.43 4.96
295 296 3.162858 TGGACGTCCGTTTGGGGT 61.163 61.111 28.70 0.00 39.43 4.95
296 297 2.357881 GGACGTCCGTTTGGGGTC 60.358 66.667 20.85 0.00 37.97 4.46
297 298 2.735857 GACGTCCGTTTGGGGTCG 60.736 66.667 3.51 0.00 38.68 4.79
298 299 4.974989 ACGTCCGTTTGGGGTCGC 62.975 66.667 0.00 0.00 37.16 5.19
305 306 4.745751 TTTGGGGTCGCGCGGTAG 62.746 66.667 31.69 0.71 0.00 3.18
309 310 4.125695 GGGTCGCGCGGTAGAGTT 62.126 66.667 31.69 0.00 0.00 3.01
310 311 2.879462 GGTCGCGCGGTAGAGTTG 60.879 66.667 31.69 0.00 0.00 3.16
311 312 2.879462 GTCGCGCGGTAGAGTTGG 60.879 66.667 31.69 0.00 0.00 3.77
312 313 4.789075 TCGCGCGGTAGAGTTGGC 62.789 66.667 31.69 0.00 0.00 4.52
314 315 4.452733 GCGCGGTAGAGTTGGCCT 62.453 66.667 8.83 0.00 0.00 5.19
315 316 3.072486 GCGCGGTAGAGTTGGCCTA 62.072 63.158 8.83 0.00 0.00 3.93
316 317 1.514087 CGCGGTAGAGTTGGCCTAA 59.486 57.895 3.32 0.00 0.00 2.69
317 318 0.108520 CGCGGTAGAGTTGGCCTAAA 60.109 55.000 3.32 0.00 0.00 1.85
318 319 1.653151 GCGGTAGAGTTGGCCTAAAG 58.347 55.000 3.32 0.00 0.00 1.85
319 320 1.742750 GCGGTAGAGTTGGCCTAAAGG 60.743 57.143 3.32 0.00 38.53 3.11
320 321 1.829222 CGGTAGAGTTGGCCTAAAGGA 59.171 52.381 3.32 0.00 37.39 3.36
321 322 2.159085 CGGTAGAGTTGGCCTAAAGGAG 60.159 54.545 3.32 0.00 37.39 3.69
330 331 3.650647 CCTAAAGGAGGTGCTGCAA 57.349 52.632 2.77 0.00 40.98 4.08
331 332 2.134789 CCTAAAGGAGGTGCTGCAAT 57.865 50.000 2.77 0.00 40.98 3.56
332 333 2.019984 CCTAAAGGAGGTGCTGCAATC 58.980 52.381 2.77 5.69 40.98 2.67
333 334 2.356535 CCTAAAGGAGGTGCTGCAATCT 60.357 50.000 2.77 5.06 40.98 2.40
334 335 2.299326 AAAGGAGGTGCTGCAATCTT 57.701 45.000 2.77 0.00 0.00 2.40
335 336 2.299326 AAGGAGGTGCTGCAATCTTT 57.701 45.000 2.77 5.79 0.00 2.52
336 337 2.299326 AGGAGGTGCTGCAATCTTTT 57.701 45.000 2.77 0.00 0.00 2.27
337 338 1.891150 AGGAGGTGCTGCAATCTTTTG 59.109 47.619 2.77 0.00 35.85 2.44
338 339 1.888512 GGAGGTGCTGCAATCTTTTGA 59.111 47.619 2.77 0.00 34.60 2.69
339 340 2.494870 GGAGGTGCTGCAATCTTTTGAT 59.505 45.455 2.77 0.00 41.73 2.57
340 341 3.696051 GGAGGTGCTGCAATCTTTTGATA 59.304 43.478 2.77 0.00 38.40 2.15
341 342 4.201990 GGAGGTGCTGCAATCTTTTGATAG 60.202 45.833 2.77 0.00 38.40 2.08
342 343 4.338879 AGGTGCTGCAATCTTTTGATAGT 58.661 39.130 2.77 0.00 38.40 2.12
343 344 4.768968 AGGTGCTGCAATCTTTTGATAGTT 59.231 37.500 2.77 0.00 38.40 2.24
344 345 5.244626 AGGTGCTGCAATCTTTTGATAGTTT 59.755 36.000 2.77 0.00 38.40 2.66
345 346 5.928264 GGTGCTGCAATCTTTTGATAGTTTT 59.072 36.000 2.77 0.00 38.40 2.43
346 347 7.039784 AGGTGCTGCAATCTTTTGATAGTTTTA 60.040 33.333 2.77 0.00 38.40 1.52
347 348 7.274250 GGTGCTGCAATCTTTTGATAGTTTTAG 59.726 37.037 2.77 0.00 38.40 1.85
348 349 7.274250 GTGCTGCAATCTTTTGATAGTTTTAGG 59.726 37.037 2.77 0.00 38.40 2.69
349 350 6.753744 GCTGCAATCTTTTGATAGTTTTAGGG 59.246 38.462 0.00 0.00 38.40 3.53
350 351 7.577616 GCTGCAATCTTTTGATAGTTTTAGGGT 60.578 37.037 0.00 0.00 38.40 4.34
351 352 8.871629 TGCAATCTTTTGATAGTTTTAGGGTA 57.128 30.769 0.00 0.00 38.40 3.69
352 353 8.956426 TGCAATCTTTTGATAGTTTTAGGGTAG 58.044 33.333 0.00 0.00 38.40 3.18
353 354 9.174166 GCAATCTTTTGATAGTTTTAGGGTAGA 57.826 33.333 0.00 0.00 38.40 2.59
356 357 9.892130 ATCTTTTGATAGTTTTAGGGTAGAGTG 57.108 33.333 0.00 0.00 37.40 3.51
357 358 8.319146 TCTTTTGATAGTTTTAGGGTAGAGTGG 58.681 37.037 0.00 0.00 0.00 4.00
358 359 7.801893 TTTGATAGTTTTAGGGTAGAGTGGA 57.198 36.000 0.00 0.00 0.00 4.02
359 360 7.989947 TTGATAGTTTTAGGGTAGAGTGGAT 57.010 36.000 0.00 0.00 0.00 3.41
360 361 7.598759 TGATAGTTTTAGGGTAGAGTGGATC 57.401 40.000 0.00 0.00 0.00 3.36
361 362 7.130099 TGATAGTTTTAGGGTAGAGTGGATCA 58.870 38.462 0.00 0.00 0.00 2.92
362 363 5.941555 AGTTTTAGGGTAGAGTGGATCAG 57.058 43.478 0.00 0.00 0.00 2.90
363 364 4.717280 AGTTTTAGGGTAGAGTGGATCAGG 59.283 45.833 0.00 0.00 0.00 3.86
364 365 2.383442 TAGGGTAGAGTGGATCAGGC 57.617 55.000 0.00 0.00 0.00 4.85
365 366 0.757188 AGGGTAGAGTGGATCAGGCG 60.757 60.000 0.00 0.00 0.00 5.52
366 367 1.742768 GGTAGAGTGGATCAGGCGG 59.257 63.158 0.00 0.00 0.00 6.13
367 368 1.068250 GTAGAGTGGATCAGGCGGC 59.932 63.158 0.00 0.00 0.00 6.53
368 369 2.134287 TAGAGTGGATCAGGCGGCC 61.134 63.158 12.11 12.11 0.00 6.13
369 370 2.589610 TAGAGTGGATCAGGCGGCCT 62.590 60.000 17.69 17.69 0.00 5.19
377 378 2.124570 CAGGCGGCCTGCTAATGT 60.125 61.111 33.93 1.07 45.13 2.71
378 379 1.750399 CAGGCGGCCTGCTAATGTT 60.750 57.895 33.93 0.23 45.13 2.71
379 380 1.750399 AGGCGGCCTGCTAATGTTG 60.750 57.895 23.19 0.00 45.43 3.33
380 381 2.102946 GCGGCCTGCTAATGTTGC 59.897 61.111 11.61 0.00 41.73 4.17
381 382 2.800736 CGGCCTGCTAATGTTGCC 59.199 61.111 0.00 0.00 38.74 4.52
382 383 2.045708 CGGCCTGCTAATGTTGCCA 61.046 57.895 0.00 0.00 42.27 4.92
383 384 1.512694 GGCCTGCTAATGTTGCCAC 59.487 57.895 0.00 0.00 41.76 5.01
384 385 1.137404 GCCTGCTAATGTTGCCACG 59.863 57.895 0.00 0.00 0.00 4.94
385 386 1.137404 CCTGCTAATGTTGCCACGC 59.863 57.895 0.00 0.00 0.00 5.34
386 387 1.585267 CCTGCTAATGTTGCCACGCA 61.585 55.000 0.00 0.00 36.47 5.24
387 388 0.452987 CTGCTAATGTTGCCACGCAT 59.547 50.000 0.00 0.00 38.76 4.73
388 389 1.670295 CTGCTAATGTTGCCACGCATA 59.330 47.619 0.00 0.00 38.76 3.14
389 390 2.087646 TGCTAATGTTGCCACGCATAA 58.912 42.857 0.00 0.00 38.76 1.90
390 391 2.097304 TGCTAATGTTGCCACGCATAAG 59.903 45.455 0.00 0.00 38.76 1.73
391 392 2.097466 GCTAATGTTGCCACGCATAAGT 59.903 45.455 0.00 0.00 38.76 2.24
392 393 3.427503 GCTAATGTTGCCACGCATAAGTT 60.428 43.478 0.00 0.00 38.76 2.66
393 394 4.201871 GCTAATGTTGCCACGCATAAGTTA 60.202 41.667 0.00 0.00 38.76 2.24
394 395 4.355543 AATGTTGCCACGCATAAGTTAG 57.644 40.909 0.00 0.00 38.76 2.34
395 396 1.466950 TGTTGCCACGCATAAGTTAGC 59.533 47.619 0.00 0.00 38.76 3.09
396 397 1.737793 GTTGCCACGCATAAGTTAGCT 59.262 47.619 0.00 0.00 38.76 3.32
397 398 2.933906 GTTGCCACGCATAAGTTAGCTA 59.066 45.455 0.00 0.00 38.76 3.32
398 399 3.254470 TGCCACGCATAAGTTAGCTAA 57.746 42.857 0.86 0.86 31.71 3.09
399 400 3.601435 TGCCACGCATAAGTTAGCTAAA 58.399 40.909 7.99 0.00 31.71 1.85
400 401 3.621268 TGCCACGCATAAGTTAGCTAAAG 59.379 43.478 7.99 0.00 31.71 1.85
401 402 3.621715 GCCACGCATAAGTTAGCTAAAGT 59.378 43.478 7.99 1.48 0.00 2.66
402 403 4.807304 GCCACGCATAAGTTAGCTAAAGTA 59.193 41.667 7.99 3.85 0.00 2.24
403 404 5.050972 GCCACGCATAAGTTAGCTAAAGTAG 60.051 44.000 7.99 0.00 0.00 2.57
404 405 5.462398 CCACGCATAAGTTAGCTAAAGTAGG 59.538 44.000 7.99 6.38 0.00 3.18
405 406 6.040878 CACGCATAAGTTAGCTAAAGTAGGT 58.959 40.000 7.99 0.00 40.14 3.08
406 407 6.019801 CACGCATAAGTTAGCTAAAGTAGGTG 60.020 42.308 7.99 13.13 37.70 4.00
407 408 6.040878 CGCATAAGTTAGCTAAAGTAGGTGT 58.959 40.000 7.99 0.00 37.70 4.16
408 409 6.534079 CGCATAAGTTAGCTAAAGTAGGTGTT 59.466 38.462 7.99 0.00 37.70 3.32
409 410 7.464178 CGCATAAGTTAGCTAAAGTAGGTGTTG 60.464 40.741 7.99 0.35 37.70 3.33
410 411 7.201617 GCATAAGTTAGCTAAAGTAGGTGTTGG 60.202 40.741 7.99 0.00 37.70 3.77
411 412 5.820404 AGTTAGCTAAAGTAGGTGTTGGT 57.180 39.130 7.99 0.00 37.70 3.67
412 413 5.548406 AGTTAGCTAAAGTAGGTGTTGGTG 58.452 41.667 7.99 0.00 37.70 4.17
413 414 5.306160 AGTTAGCTAAAGTAGGTGTTGGTGA 59.694 40.000 7.99 0.00 37.70 4.02
414 415 4.910458 AGCTAAAGTAGGTGTTGGTGAT 57.090 40.909 0.00 0.00 34.78 3.06
415 416 7.179694 AGTTAGCTAAAGTAGGTGTTGGTGATA 59.820 37.037 7.99 0.00 37.70 2.15
416 417 6.368779 AGCTAAAGTAGGTGTTGGTGATAA 57.631 37.500 0.00 0.00 34.78 1.75
417 418 6.958767 AGCTAAAGTAGGTGTTGGTGATAAT 58.041 36.000 0.00 0.00 34.78 1.28
418 419 7.048512 AGCTAAAGTAGGTGTTGGTGATAATC 58.951 38.462 0.00 0.00 34.78 1.75
419 420 7.048512 GCTAAAGTAGGTGTTGGTGATAATCT 58.951 38.462 0.00 0.00 0.00 2.40
420 421 7.553044 GCTAAAGTAGGTGTTGGTGATAATCTT 59.447 37.037 0.00 0.00 0.00 2.40
421 422 9.449719 CTAAAGTAGGTGTTGGTGATAATCTTT 57.550 33.333 0.00 0.00 0.00 2.52
422 423 7.687941 AAGTAGGTGTTGGTGATAATCTTTG 57.312 36.000 0.00 0.00 0.00 2.77
423 424 6.779860 AGTAGGTGTTGGTGATAATCTTTGT 58.220 36.000 0.00 0.00 0.00 2.83
424 425 7.913789 AGTAGGTGTTGGTGATAATCTTTGTA 58.086 34.615 0.00 0.00 0.00 2.41
425 426 8.380099 AGTAGGTGTTGGTGATAATCTTTGTAA 58.620 33.333 0.00 0.00 0.00 2.41
426 427 7.687941 AGGTGTTGGTGATAATCTTTGTAAG 57.312 36.000 0.00 0.00 0.00 2.34
427 428 6.659242 AGGTGTTGGTGATAATCTTTGTAAGG 59.341 38.462 0.00 0.00 0.00 2.69
428 429 6.433093 GGTGTTGGTGATAATCTTTGTAAGGT 59.567 38.462 0.00 0.00 0.00 3.50
429 430 7.039993 GGTGTTGGTGATAATCTTTGTAAGGTT 60.040 37.037 0.00 0.00 35.62 3.50
430 431 8.357402 GTGTTGGTGATAATCTTTGTAAGGTTT 58.643 33.333 0.00 0.00 33.06 3.27
431 432 8.356657 TGTTGGTGATAATCTTTGTAAGGTTTG 58.643 33.333 0.00 0.00 33.06 2.93
432 433 7.461182 TGGTGATAATCTTTGTAAGGTTTGG 57.539 36.000 0.00 0.00 33.06 3.28
433 434 7.235079 TGGTGATAATCTTTGTAAGGTTTGGA 58.765 34.615 0.00 0.00 33.06 3.53
434 435 7.893302 TGGTGATAATCTTTGTAAGGTTTGGAT 59.107 33.333 0.00 0.00 33.06 3.41
435 436 8.749354 GGTGATAATCTTTGTAAGGTTTGGATT 58.251 33.333 0.00 0.00 33.06 3.01
436 437 9.573133 GTGATAATCTTTGTAAGGTTTGGATTG 57.427 33.333 0.00 0.00 33.06 2.67
437 438 8.748412 TGATAATCTTTGTAAGGTTTGGATTGG 58.252 33.333 0.00 0.00 33.06 3.16
438 439 6.358974 AATCTTTGTAAGGTTTGGATTGGG 57.641 37.500 0.00 0.00 0.00 4.12
439 440 4.156477 TCTTTGTAAGGTTTGGATTGGGG 58.844 43.478 0.00 0.00 0.00 4.96
440 441 1.931635 TGTAAGGTTTGGATTGGGGC 58.068 50.000 0.00 0.00 0.00 5.80
441 442 1.431243 TGTAAGGTTTGGATTGGGGCT 59.569 47.619 0.00 0.00 0.00 5.19
442 443 2.100197 GTAAGGTTTGGATTGGGGCTC 58.900 52.381 0.00 0.00 0.00 4.70
443 444 0.252239 AAGGTTTGGATTGGGGCTCC 60.252 55.000 0.00 0.00 0.00 4.70
444 445 1.685765 GGTTTGGATTGGGGCTCCC 60.686 63.158 0.00 0.72 45.71 4.30
454 455 3.746957 GGGCTCCCCAGACTTCAT 58.253 61.111 0.00 0.00 44.65 2.57
455 456 2.002625 GGGCTCCCCAGACTTCATT 58.997 57.895 0.00 0.00 44.65 2.57
456 457 0.106967 GGGCTCCCCAGACTTCATTC 60.107 60.000 0.00 0.00 44.65 2.67
457 458 0.915364 GGCTCCCCAGACTTCATTCT 59.085 55.000 0.00 0.00 0.00 2.40
458 459 1.134250 GGCTCCCCAGACTTCATTCTC 60.134 57.143 0.00 0.00 0.00 2.87
459 460 1.556911 GCTCCCCAGACTTCATTCTCA 59.443 52.381 0.00 0.00 0.00 3.27
460 461 2.026822 GCTCCCCAGACTTCATTCTCAA 60.027 50.000 0.00 0.00 0.00 3.02
461 462 3.371380 GCTCCCCAGACTTCATTCTCAAT 60.371 47.826 0.00 0.00 0.00 2.57
462 463 4.197750 CTCCCCAGACTTCATTCTCAATG 58.802 47.826 0.00 0.00 40.28 2.82
463 464 3.588842 TCCCCAGACTTCATTCTCAATGT 59.411 43.478 0.00 0.00 39.87 2.71
464 465 4.782691 TCCCCAGACTTCATTCTCAATGTA 59.217 41.667 0.00 0.00 39.87 2.29
465 466 5.250543 TCCCCAGACTTCATTCTCAATGTAA 59.749 40.000 0.00 0.00 39.87 2.41
466 467 6.069440 TCCCCAGACTTCATTCTCAATGTAAT 60.069 38.462 0.00 0.00 39.87 1.89
467 468 6.604795 CCCCAGACTTCATTCTCAATGTAATT 59.395 38.462 0.00 0.00 39.87 1.40
468 469 7.123247 CCCCAGACTTCATTCTCAATGTAATTT 59.877 37.037 0.00 0.00 39.87 1.82
469 470 8.186821 CCCAGACTTCATTCTCAATGTAATTTC 58.813 37.037 0.00 0.00 39.87 2.17
470 471 7.907045 CCAGACTTCATTCTCAATGTAATTTCG 59.093 37.037 0.00 0.00 39.87 3.46
471 472 7.907045 CAGACTTCATTCTCAATGTAATTTCGG 59.093 37.037 0.00 0.00 39.87 4.30
472 473 7.824289 AGACTTCATTCTCAATGTAATTTCGGA 59.176 33.333 0.00 0.00 39.87 4.55
473 474 8.511604 ACTTCATTCTCAATGTAATTTCGGAT 57.488 30.769 0.00 0.00 39.87 4.18
474 475 8.400947 ACTTCATTCTCAATGTAATTTCGGATG 58.599 33.333 0.00 0.00 39.87 3.51
475 476 8.504812 TTCATTCTCAATGTAATTTCGGATGA 57.495 30.769 0.00 0.00 39.87 2.92
476 477 7.919690 TCATTCTCAATGTAATTTCGGATGAC 58.080 34.615 0.00 0.00 39.87 3.06
477 478 7.552330 TCATTCTCAATGTAATTTCGGATGACA 59.448 33.333 0.00 0.00 39.87 3.58
478 479 7.864108 TTCTCAATGTAATTTCGGATGACAT 57.136 32.000 0.00 0.00 31.22 3.06
479 480 7.864108 TCTCAATGTAATTTCGGATGACATT 57.136 32.000 8.69 8.69 40.46 2.71
480 481 8.279970 TCTCAATGTAATTTCGGATGACATTT 57.720 30.769 10.81 0.00 38.37 2.32
481 482 8.397906 TCTCAATGTAATTTCGGATGACATTTC 58.602 33.333 10.81 0.00 38.37 2.17
482 483 7.186128 TCAATGTAATTTCGGATGACATTTCG 58.814 34.615 10.81 5.97 38.37 3.46
483 484 6.918892 ATGTAATTTCGGATGACATTTCGA 57.081 33.333 9.71 9.71 0.00 3.71
484 485 6.344572 TGTAATTTCGGATGACATTTCGAG 57.655 37.500 12.36 0.00 33.11 4.04
485 486 3.951979 ATTTCGGATGACATTTCGAGC 57.048 42.857 12.36 0.00 33.11 5.03
486 487 2.672961 TTCGGATGACATTTCGAGCT 57.327 45.000 12.36 0.00 33.11 4.09
487 488 3.793797 TTCGGATGACATTTCGAGCTA 57.206 42.857 12.36 0.28 33.11 3.32
488 489 4.322080 TTCGGATGACATTTCGAGCTAT 57.678 40.909 12.36 0.00 33.11 2.97
489 490 3.642705 TCGGATGACATTTCGAGCTATG 58.357 45.455 9.71 0.00 0.00 2.23
490 491 2.733552 CGGATGACATTTCGAGCTATGG 59.266 50.000 6.35 0.00 0.00 2.74
491 492 3.733337 GGATGACATTTCGAGCTATGGT 58.267 45.455 8.49 0.00 0.00 3.55
492 493 4.130118 GGATGACATTTCGAGCTATGGTT 58.870 43.478 8.49 0.00 0.00 3.67
493 494 5.297547 GGATGACATTTCGAGCTATGGTTA 58.702 41.667 8.49 0.00 0.00 2.85
494 495 5.758296 GGATGACATTTCGAGCTATGGTTAA 59.242 40.000 8.49 0.00 0.00 2.01
495 496 6.260050 GGATGACATTTCGAGCTATGGTTAAA 59.740 38.462 8.49 0.00 0.00 1.52
496 497 7.041098 GGATGACATTTCGAGCTATGGTTAAAT 60.041 37.037 8.49 0.00 0.00 1.40
497 498 8.902540 ATGACATTTCGAGCTATGGTTAAATA 57.097 30.769 8.49 0.00 0.00 1.40
498 499 8.725405 TGACATTTCGAGCTATGGTTAAATAA 57.275 30.769 8.49 0.00 0.00 1.40
499 500 9.168451 TGACATTTCGAGCTATGGTTAAATAAA 57.832 29.630 8.49 0.00 0.00 1.40
500 501 9.651718 GACATTTCGAGCTATGGTTAAATAAAG 57.348 33.333 8.49 0.00 0.00 1.85
501 502 9.174166 ACATTTCGAGCTATGGTTAAATAAAGT 57.826 29.630 8.49 0.00 0.00 2.66
502 503 9.438291 CATTTCGAGCTATGGTTAAATAAAGTG 57.562 33.333 0.00 0.00 0.00 3.16
503 504 7.548196 TTCGAGCTATGGTTAAATAAAGTGG 57.452 36.000 0.00 0.00 0.00 4.00
504 505 5.526111 TCGAGCTATGGTTAAATAAAGTGGC 59.474 40.000 0.00 0.00 0.00 5.01
505 506 5.295787 CGAGCTATGGTTAAATAAAGTGGCA 59.704 40.000 0.00 0.00 0.00 4.92
506 507 6.183360 CGAGCTATGGTTAAATAAAGTGGCAA 60.183 38.462 0.00 0.00 0.00 4.52
507 508 6.863275 AGCTATGGTTAAATAAAGTGGCAAC 58.137 36.000 0.00 0.00 0.00 4.17
508 509 5.741982 GCTATGGTTAAATAAAGTGGCAACG 59.258 40.000 0.00 0.00 42.51 4.10
509 510 5.715434 ATGGTTAAATAAAGTGGCAACGT 57.285 34.783 0.00 0.00 42.51 3.99
510 511 5.517322 TGGTTAAATAAAGTGGCAACGTT 57.483 34.783 0.00 0.00 42.51 3.99
511 512 6.630444 TGGTTAAATAAAGTGGCAACGTTA 57.370 33.333 0.00 1.91 42.51 3.18
512 513 7.035840 TGGTTAAATAAAGTGGCAACGTTAA 57.964 32.000 0.00 0.00 34.56 2.01
513 514 6.916932 TGGTTAAATAAAGTGGCAACGTTAAC 59.083 34.615 0.00 6.41 34.56 2.01
514 515 6.363088 GGTTAAATAAAGTGGCAACGTTAACC 59.637 38.462 11.64 11.64 40.91 2.85
515 516 5.777850 AAATAAAGTGGCAACGTTAACCT 57.222 34.783 17.62 2.82 34.56 3.50
516 517 5.366829 AATAAAGTGGCAACGTTAACCTC 57.633 39.130 17.62 14.58 34.56 3.85
517 518 2.335316 AAGTGGCAACGTTAACCTCA 57.665 45.000 17.62 3.37 42.51 3.86
518 519 2.335316 AGTGGCAACGTTAACCTCAA 57.665 45.000 17.62 0.00 42.51 3.02
519 520 2.645802 AGTGGCAACGTTAACCTCAAA 58.354 42.857 17.62 0.00 42.51 2.69
520 521 3.018149 AGTGGCAACGTTAACCTCAAAA 58.982 40.909 17.62 0.00 42.51 2.44
521 522 3.444388 AGTGGCAACGTTAACCTCAAAAA 59.556 39.130 17.62 0.00 42.51 1.94
540 541 2.094904 AAAAACATCCCCGCGATCG 58.905 52.632 11.69 11.69 0.00 3.69
560 561 4.593864 GAGATCCACGCGCCCTCC 62.594 72.222 5.73 0.00 0.00 4.30
646 648 0.033920 CAGGCAGGGAAAAAGTTGGC 59.966 55.000 0.00 0.00 36.47 4.52
651 653 2.037641 GCAGGGAAAAAGTTGGCAGAAT 59.962 45.455 0.00 0.00 0.00 2.40
658 660 3.855689 AAAGTTGGCAGAATCCAATCG 57.144 42.857 0.00 0.00 46.64 3.34
738 772 0.310854 CAGCCACCAGTTTCGTTTCC 59.689 55.000 0.00 0.00 0.00 3.13
740 774 0.958822 GCCACCAGTTTCGTTTCCAT 59.041 50.000 0.00 0.00 0.00 3.41
759 793 3.131755 CCATGGAAATTCCTTCAAGAGGC 59.868 47.826 13.78 0.00 45.87 4.70
765 799 0.401738 TTCCTTCAAGAGGCCACTGG 59.598 55.000 5.01 0.31 45.87 4.00
768 802 1.005215 CCTTCAAGAGGCCACTGGATT 59.995 52.381 8.24 0.00 39.09 3.01
769 803 2.089980 CTTCAAGAGGCCACTGGATTG 58.910 52.381 8.24 0.53 0.00 2.67
770 804 0.322816 TCAAGAGGCCACTGGATTGC 60.323 55.000 5.01 0.00 0.00 3.56
771 805 0.323178 CAAGAGGCCACTGGATTGCT 60.323 55.000 5.01 0.00 0.00 3.91
772 806 0.034670 AAGAGGCCACTGGATTGCTC 60.035 55.000 5.01 0.00 0.00 4.26
777 813 0.833287 GCCACTGGATTGCTCTAGGA 59.167 55.000 0.00 0.00 34.44 2.94
796 832 4.767255 CTCGGCCTGCCTGACCAC 62.767 72.222 6.60 0.00 0.00 4.16
806 875 1.079266 CCTGACCACTGCTCTGCTC 60.079 63.158 0.00 0.00 0.00 4.26
813 909 0.034476 CACTGCTCTGCTCCTGTGAA 59.966 55.000 0.00 0.00 0.00 3.18
818 914 2.568956 TGCTCTGCTCCTGTGAACTAAT 59.431 45.455 0.00 0.00 0.00 1.73
819 915 2.935201 GCTCTGCTCCTGTGAACTAATG 59.065 50.000 0.00 0.00 0.00 1.90
821 917 2.568956 TCTGCTCCTGTGAACTAATGCT 59.431 45.455 0.00 0.00 0.00 3.79
822 918 3.769300 TCTGCTCCTGTGAACTAATGCTA 59.231 43.478 0.00 0.00 0.00 3.49
823 919 4.222810 TCTGCTCCTGTGAACTAATGCTAA 59.777 41.667 0.00 0.00 0.00 3.09
824 920 4.507710 TGCTCCTGTGAACTAATGCTAAG 58.492 43.478 0.00 0.00 0.00 2.18
826 922 3.873910 TCCTGTGAACTAATGCTAAGCC 58.126 45.455 0.00 0.00 0.00 4.35
828 924 2.609459 CTGTGAACTAATGCTAAGCCCG 59.391 50.000 0.00 0.00 0.00 6.13
830 926 0.582005 GAACTAATGCTAAGCCCGCG 59.418 55.000 0.00 0.00 0.00 6.46
831 927 0.177141 AACTAATGCTAAGCCCGCGA 59.823 50.000 8.23 0.00 0.00 5.87
832 928 0.529992 ACTAATGCTAAGCCCGCGAC 60.530 55.000 8.23 0.00 0.00 5.19
833 929 0.249489 CTAATGCTAAGCCCGCGACT 60.249 55.000 8.23 0.45 0.00 4.18
834 930 0.177141 TAATGCTAAGCCCGCGACTT 59.823 50.000 8.23 13.83 0.00 3.01
835 931 0.177141 AATGCTAAGCCCGCGACTTA 59.823 50.000 8.23 14.26 0.00 2.24
836 932 0.177141 ATGCTAAGCCCGCGACTTAA 59.823 50.000 8.23 1.68 0.00 1.85
837 933 0.037139 TGCTAAGCCCGCGACTTAAA 60.037 50.000 8.23 3.95 0.00 1.52
838 934 1.081094 GCTAAGCCCGCGACTTAAAA 58.919 50.000 8.23 0.00 0.00 1.52
839 935 1.201998 GCTAAGCCCGCGACTTAAAAC 60.202 52.381 8.23 4.33 0.00 2.43
840 936 2.070783 CTAAGCCCGCGACTTAAAACA 58.929 47.619 8.23 0.00 0.00 2.83
841 937 0.589708 AAGCCCGCGACTTAAAACAC 59.410 50.000 8.23 0.00 0.00 3.32
842 938 0.533308 AGCCCGCGACTTAAAACACA 60.533 50.000 8.23 0.00 0.00 3.72
843 939 0.519961 GCCCGCGACTTAAAACACAT 59.480 50.000 8.23 0.00 0.00 3.21
844 940 1.727857 GCCCGCGACTTAAAACACATG 60.728 52.381 8.23 0.00 0.00 3.21
845 941 1.602191 CCGCGACTTAAAACACATGC 58.398 50.000 8.23 0.00 0.00 4.06
846 942 1.196808 CCGCGACTTAAAACACATGCT 59.803 47.619 8.23 0.00 0.00 3.79
847 943 2.413796 CCGCGACTTAAAACACATGCTA 59.586 45.455 8.23 0.00 0.00 3.49
848 944 3.120477 CCGCGACTTAAAACACATGCTAA 60.120 43.478 8.23 0.00 0.00 3.09
849 945 4.081761 CGCGACTTAAAACACATGCTAAG 58.918 43.478 0.00 0.00 0.00 2.18
850 946 3.846335 GCGACTTAAAACACATGCTAAGC 59.154 43.478 0.00 0.00 0.00 3.09
851 947 4.403453 CGACTTAAAACACATGCTAAGCC 58.597 43.478 0.00 0.00 0.00 4.35
852 948 4.671766 CGACTTAAAACACATGCTAAGCCC 60.672 45.833 0.00 0.00 0.00 5.19
853 949 4.148838 ACTTAAAACACATGCTAAGCCCA 58.851 39.130 0.00 0.00 0.00 5.36
854 950 4.022329 ACTTAAAACACATGCTAAGCCCAC 60.022 41.667 0.00 0.00 0.00 4.61
855 951 0.881118 AAACACATGCTAAGCCCACG 59.119 50.000 0.00 0.00 0.00 4.94
856 952 0.036164 AACACATGCTAAGCCCACGA 59.964 50.000 0.00 0.00 0.00 4.35
857 953 0.673644 ACACATGCTAAGCCCACGAC 60.674 55.000 0.00 0.00 0.00 4.34
858 954 1.078426 ACATGCTAAGCCCACGACC 60.078 57.895 0.00 0.00 0.00 4.79
859 955 1.221840 CATGCTAAGCCCACGACCT 59.778 57.895 0.00 0.00 0.00 3.85
860 956 0.464036 CATGCTAAGCCCACGACCTA 59.536 55.000 0.00 0.00 0.00 3.08
861 957 1.134521 CATGCTAAGCCCACGACCTAA 60.135 52.381 0.00 0.00 0.00 2.69
862 958 0.978151 TGCTAAGCCCACGACCTAAA 59.022 50.000 0.00 0.00 0.00 1.85
863 959 1.338389 TGCTAAGCCCACGACCTAAAC 60.338 52.381 0.00 0.00 0.00 2.01
864 960 1.338389 GCTAAGCCCACGACCTAAACA 60.338 52.381 0.00 0.00 0.00 2.83
865 961 2.618053 CTAAGCCCACGACCTAAACAG 58.382 52.381 0.00 0.00 0.00 3.16
866 962 0.763035 AAGCCCACGACCTAAACAGT 59.237 50.000 0.00 0.00 0.00 3.55
867 963 1.636148 AGCCCACGACCTAAACAGTA 58.364 50.000 0.00 0.00 0.00 2.74
868 964 1.972795 AGCCCACGACCTAAACAGTAA 59.027 47.619 0.00 0.00 0.00 2.24
869 965 2.369532 AGCCCACGACCTAAACAGTAAA 59.630 45.455 0.00 0.00 0.00 2.01
870 966 2.481568 GCCCACGACCTAAACAGTAAAC 59.518 50.000 0.00 0.00 0.00 2.01
871 967 3.731089 CCCACGACCTAAACAGTAAACA 58.269 45.455 0.00 0.00 0.00 2.83
872 968 3.495753 CCCACGACCTAAACAGTAAACAC 59.504 47.826 0.00 0.00 0.00 3.32
873 969 3.182972 CCACGACCTAAACAGTAAACACG 59.817 47.826 0.00 0.00 0.00 4.49
874 970 3.182972 CACGACCTAAACAGTAAACACGG 59.817 47.826 0.00 0.00 0.00 4.94
875 971 3.068024 ACGACCTAAACAGTAAACACGGA 59.932 43.478 0.00 0.00 0.00 4.69
876 972 3.426525 CGACCTAAACAGTAAACACGGAC 59.573 47.826 0.00 0.00 0.00 4.79
877 973 4.370917 GACCTAAACAGTAAACACGGACA 58.629 43.478 0.00 0.00 0.00 4.02
878 974 4.122046 ACCTAAACAGTAAACACGGACAC 58.878 43.478 0.00 0.00 0.00 3.67
879 975 4.141869 ACCTAAACAGTAAACACGGACACT 60.142 41.667 0.00 0.00 0.00 3.55
880 976 5.068987 ACCTAAACAGTAAACACGGACACTA 59.931 40.000 0.00 0.00 0.00 2.74
881 977 5.984926 CCTAAACAGTAAACACGGACACTAA 59.015 40.000 0.00 0.00 0.00 2.24
882 978 6.647895 CCTAAACAGTAAACACGGACACTAAT 59.352 38.462 0.00 0.00 0.00 1.73
883 979 6.535274 AAACAGTAAACACGGACACTAATC 57.465 37.500 0.00 0.00 0.00 1.75
884 980 5.464030 ACAGTAAACACGGACACTAATCT 57.536 39.130 0.00 0.00 0.00 2.40
885 981 6.579666 ACAGTAAACACGGACACTAATCTA 57.420 37.500 0.00 0.00 0.00 1.98
886 982 6.985117 ACAGTAAACACGGACACTAATCTAA 58.015 36.000 0.00 0.00 0.00 2.10
887 983 6.865205 ACAGTAAACACGGACACTAATCTAAC 59.135 38.462 0.00 0.00 0.00 2.34
888 984 6.309737 CAGTAAACACGGACACTAATCTAACC 59.690 42.308 0.00 0.00 0.00 2.85
889 985 3.881937 ACACGGACACTAATCTAACCC 57.118 47.619 0.00 0.00 0.00 4.11
890 986 3.438183 ACACGGACACTAATCTAACCCT 58.562 45.455 0.00 0.00 0.00 4.34
891 987 3.446516 ACACGGACACTAATCTAACCCTC 59.553 47.826 0.00 0.00 0.00 4.30
892 988 2.686915 ACGGACACTAATCTAACCCTCG 59.313 50.000 0.00 0.00 0.00 4.63
893 989 2.543238 CGGACACTAATCTAACCCTCGC 60.543 54.545 0.00 0.00 0.00 5.03
894 990 2.223994 GGACACTAATCTAACCCTCGCC 60.224 54.545 0.00 0.00 0.00 5.54
895 991 1.407979 ACACTAATCTAACCCTCGCCG 59.592 52.381 0.00 0.00 0.00 6.46
896 992 0.388294 ACTAATCTAACCCTCGCCGC 59.612 55.000 0.00 0.00 0.00 6.53
897 993 0.674534 CTAATCTAACCCTCGCCGCT 59.325 55.000 0.00 0.00 0.00 5.52
918 1014 2.635915 TGTCCGCCTATATAAACCCCAG 59.364 50.000 0.00 0.00 0.00 4.45
935 1031 2.363406 GCAGCCCAGCCCATTCTT 60.363 61.111 0.00 0.00 0.00 2.52
958 1057 5.574891 TGCATCTTTACTTGTGTTGTGTT 57.425 34.783 0.00 0.00 0.00 3.32
959 1058 5.339177 TGCATCTTTACTTGTGTTGTGTTG 58.661 37.500 0.00 0.00 0.00 3.33
960 1059 5.105957 TGCATCTTTACTTGTGTTGTGTTGT 60.106 36.000 0.00 0.00 0.00 3.32
961 1060 5.229887 GCATCTTTACTTGTGTTGTGTTGTG 59.770 40.000 0.00 0.00 0.00 3.33
962 1061 5.950758 TCTTTACTTGTGTTGTGTTGTGT 57.049 34.783 0.00 0.00 0.00 3.72
964 1063 4.688511 TTACTTGTGTTGTGTTGTGTCC 57.311 40.909 0.00 0.00 0.00 4.02
965 1064 1.816224 ACTTGTGTTGTGTTGTGTCCC 59.184 47.619 0.00 0.00 0.00 4.46
968 1067 0.655733 GTGTTGTGTTGTGTCCCTCG 59.344 55.000 0.00 0.00 0.00 4.63
969 1068 0.250793 TGTTGTGTTGTGTCCCTCGT 59.749 50.000 0.00 0.00 0.00 4.18
971 1070 1.063469 GTTGTGTTGTGTCCCTCGTTG 59.937 52.381 0.00 0.00 0.00 4.10
972 1071 0.462937 TGTGTTGTGTCCCTCGTTGG 60.463 55.000 0.00 0.00 0.00 3.77
1054 1186 1.457455 CTCCTGCTCCTCCTCCTCC 60.457 68.421 0.00 0.00 0.00 4.30
1355 1496 1.115467 GCAAGAGGGTCTGCTAGCTA 58.885 55.000 17.23 0.72 0.00 3.32
1366 1508 2.338257 CTAGCTAGCCCTGCTCGC 59.662 66.667 12.13 4.59 45.71 5.03
1367 1509 3.219645 CTAGCTAGCCCTGCTCGCC 62.220 68.421 12.13 0.00 46.37 5.54
1407 1549 0.945813 GACGTCCGATGCTAGCTACT 59.054 55.000 17.23 0.01 0.00 2.57
1409 1551 0.238817 CGTCCGATGCTAGCTACTCC 59.761 60.000 17.23 0.00 0.00 3.85
1412 1554 1.032794 CCGATGCTAGCTACTCCACA 58.967 55.000 17.23 0.00 0.00 4.17
1413 1555 1.615883 CCGATGCTAGCTACTCCACAT 59.384 52.381 17.23 0.00 0.00 3.21
1414 1556 2.608998 CCGATGCTAGCTACTCCACATG 60.609 54.545 17.23 0.00 0.00 3.21
1415 1557 2.035193 CGATGCTAGCTACTCCACATGT 59.965 50.000 17.23 0.00 0.00 3.21
1416 1558 3.491619 CGATGCTAGCTACTCCACATGTT 60.492 47.826 17.23 0.00 0.00 2.71
1417 1559 3.251479 TGCTAGCTACTCCACATGTTG 57.749 47.619 17.23 0.00 0.00 3.33
1418 1560 1.936547 GCTAGCTACTCCACATGTTGC 59.063 52.381 7.70 0.00 36.66 4.17
1419 1561 2.419297 GCTAGCTACTCCACATGTTGCT 60.419 50.000 7.70 7.76 45.29 3.91
1420 1562 2.105006 AGCTACTCCACATGTTGCTG 57.895 50.000 0.00 0.00 42.77 4.41
1421 1563 1.089920 GCTACTCCACATGTTGCTGG 58.910 55.000 0.00 0.00 34.37 4.85
1422 1564 1.089920 CTACTCCACATGTTGCTGGC 58.910 55.000 0.00 0.00 0.00 4.85
1428 1571 0.455464 CACATGTTGCTGGCATCGTG 60.455 55.000 18.53 18.53 38.15 4.35
1429 1572 0.890542 ACATGTTGCTGGCATCGTGT 60.891 50.000 19.52 19.52 39.58 4.49
1437 1580 2.220615 CTGGCATCGTGTGTCCCGTA 62.221 60.000 0.00 0.00 0.00 4.02
1438 1581 1.079681 GGCATCGTGTGTCCCGTAA 60.080 57.895 0.00 0.00 0.00 3.18
1441 1584 1.735571 GCATCGTGTGTCCCGTAATTT 59.264 47.619 0.00 0.00 0.00 1.82
1444 1587 2.836262 TCGTGTGTCCCGTAATTTGTT 58.164 42.857 0.00 0.00 0.00 2.83
1445 1588 2.801679 TCGTGTGTCCCGTAATTTGTTC 59.198 45.455 0.00 0.00 0.00 3.18
1455 1598 4.628333 CCCGTAATTTGTTCGTCAGTGTAT 59.372 41.667 0.00 0.00 0.00 2.29
1456 1599 5.445407 CCCGTAATTTGTTCGTCAGTGTATG 60.445 44.000 0.00 0.00 0.00 2.39
1457 1600 5.346551 CCGTAATTTGTTCGTCAGTGTATGA 59.653 40.000 0.00 0.00 34.79 2.15
1463 1606 5.134202 TGTTCGTCAGTGTATGAGTTCAT 57.866 39.130 0.00 0.00 39.07 2.57
1489 1662 1.065709 ACTTGTTCTTGTGTGTCCCGT 60.066 47.619 0.00 0.00 0.00 5.28
1490 1663 1.330521 CTTGTTCTTGTGTGTCCCGTG 59.669 52.381 0.00 0.00 0.00 4.94
1565 1742 4.326009 TCGTGTTTTTCTTTTGCTGCTTTC 59.674 37.500 0.00 0.00 0.00 2.62
1576 1757 0.029834 GCTGCTTTCTGTGTGTGTGG 59.970 55.000 0.00 0.00 0.00 4.17
1577 1758 0.664761 CTGCTTTCTGTGTGTGTGGG 59.335 55.000 0.00 0.00 0.00 4.61
1578 1759 0.751277 TGCTTTCTGTGTGTGTGGGG 60.751 55.000 0.00 0.00 0.00 4.96
1579 1760 1.455383 GCTTTCTGTGTGTGTGGGGG 61.455 60.000 0.00 0.00 0.00 5.40
1599 1780 2.011947 GGGGTAATGTAACAAGGTCGC 58.988 52.381 0.00 0.00 0.00 5.19
1638 1821 2.943690 ACATGTGCAATGCATCTCTCTC 59.056 45.455 12.38 0.00 41.91 3.20
1640 1823 4.141779 ACATGTGCAATGCATCTCTCTCTA 60.142 41.667 12.38 0.00 41.91 2.43
1650 1833 6.822667 TGCATCTCTCTCTATCTCTGATTC 57.177 41.667 0.00 0.00 0.00 2.52
1671 1862 4.053295 TCGTCTGTTTGGTGCTACTAAAC 58.947 43.478 15.95 15.95 45.87 2.01
1712 1903 3.184382 TGTGACTCCTACATCTTCCCA 57.816 47.619 0.00 0.00 0.00 4.37
1758 3299 0.108138 TTGCTTCGAGGAGCTAAGGC 60.108 55.000 10.30 0.00 43.11 4.35
1760 3301 1.681486 GCTTCGAGGAGCTAAGGCCT 61.681 60.000 0.00 0.00 39.57 5.19
1761 3302 1.693627 CTTCGAGGAGCTAAGGCCTA 58.306 55.000 5.16 0.00 39.73 3.93
1762 3303 2.032620 CTTCGAGGAGCTAAGGCCTAA 58.967 52.381 5.16 0.00 39.73 2.69
1764 3305 0.676736 CGAGGAGCTAAGGCCTAAGG 59.323 60.000 5.16 0.00 39.73 2.69
1788 3335 4.462834 CCCTGTTTCTCTTTTCAATACCCC 59.537 45.833 0.00 0.00 0.00 4.95
1856 3404 3.804193 GCACAGCGGCCAGTAAGC 61.804 66.667 2.24 0.00 0.00 3.09
1869 3417 2.921754 CCAGTAAGCTACACGTGTAAGC 59.078 50.000 27.16 27.63 0.00 3.09
2007 4699 0.040058 TAACAGGGGAGGAGCGTACA 59.960 55.000 0.00 0.00 0.00 2.90
2008 4700 1.258445 AACAGGGGAGGAGCGTACAG 61.258 60.000 0.00 0.00 0.00 2.74
2047 4739 1.742411 CGTACAAGAATGGGCGGTCAT 60.742 52.381 0.00 0.00 0.00 3.06
2196 6201 0.031994 GCAACGGCCACTTGTTCATT 59.968 50.000 2.24 0.00 0.00 2.57
2352 6357 4.792528 AACAATTGCCAAACATTTGTCG 57.207 36.364 5.05 0.00 46.77 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.875708 AGGCCCAGTTTCATAATTAACATAATA 57.124 29.630 0.00 0.00 0.00 0.98
10 11 8.782137 AGGCCCAGTTTCATAATTAACATAAT 57.218 30.769 0.00 0.00 0.00 1.28
11 12 8.602472 AAGGCCCAGTTTCATAATTAACATAA 57.398 30.769 0.00 0.00 0.00 1.90
12 13 8.602472 AAAGGCCCAGTTTCATAATTAACATA 57.398 30.769 0.00 0.00 0.00 2.29
13 14 7.494922 AAAGGCCCAGTTTCATAATTAACAT 57.505 32.000 0.00 0.00 0.00 2.71
14 15 6.926630 AAAGGCCCAGTTTCATAATTAACA 57.073 33.333 0.00 0.00 0.00 2.41
15 16 9.366216 CTTAAAAGGCCCAGTTTCATAATTAAC 57.634 33.333 0.00 0.00 0.00 2.01
16 17 9.095700 ACTTAAAAGGCCCAGTTTCATAATTAA 57.904 29.630 0.00 0.00 0.00 1.40
17 18 8.527810 CACTTAAAAGGCCCAGTTTCATAATTA 58.472 33.333 0.00 0.00 0.00 1.40
18 19 7.386059 CACTTAAAAGGCCCAGTTTCATAATT 58.614 34.615 0.00 0.00 0.00 1.40
19 20 6.070824 CCACTTAAAAGGCCCAGTTTCATAAT 60.071 38.462 0.00 0.00 0.00 1.28
20 21 5.245075 CCACTTAAAAGGCCCAGTTTCATAA 59.755 40.000 0.00 0.00 0.00 1.90
21 22 4.770010 CCACTTAAAAGGCCCAGTTTCATA 59.230 41.667 0.00 0.00 0.00 2.15
22 23 3.578282 CCACTTAAAAGGCCCAGTTTCAT 59.422 43.478 0.00 0.00 0.00 2.57
23 24 2.962421 CCACTTAAAAGGCCCAGTTTCA 59.038 45.455 0.00 0.00 0.00 2.69
24 25 2.288825 GCCACTTAAAAGGCCCAGTTTC 60.289 50.000 0.00 0.00 45.18 2.78
25 26 1.691976 GCCACTTAAAAGGCCCAGTTT 59.308 47.619 0.00 0.00 45.18 2.66
26 27 1.338107 GCCACTTAAAAGGCCCAGTT 58.662 50.000 0.00 0.00 45.18 3.16
27 28 3.051617 GCCACTTAAAAGGCCCAGT 57.948 52.632 0.00 0.00 45.18 4.00
33 34 2.287970 GGTTCAACGGCCACTTAAAAGG 60.288 50.000 2.24 0.00 0.00 3.11
34 35 2.359531 TGGTTCAACGGCCACTTAAAAG 59.640 45.455 2.24 0.00 0.00 2.27
35 36 2.359531 CTGGTTCAACGGCCACTTAAAA 59.640 45.455 2.24 0.00 0.00 1.52
36 37 1.950909 CTGGTTCAACGGCCACTTAAA 59.049 47.619 2.24 0.00 0.00 1.52
37 38 1.600023 CTGGTTCAACGGCCACTTAA 58.400 50.000 2.24 0.00 0.00 1.85
38 39 0.250553 CCTGGTTCAACGGCCACTTA 60.251 55.000 2.24 0.00 0.00 2.24
39 40 1.528309 CCTGGTTCAACGGCCACTT 60.528 57.895 2.24 0.00 0.00 3.16
40 41 2.113139 CCTGGTTCAACGGCCACT 59.887 61.111 2.24 0.00 0.00 4.00
41 42 2.983592 CCCTGGTTCAACGGCCAC 60.984 66.667 2.24 0.00 0.00 5.01
42 43 4.966787 GCCCTGGTTCAACGGCCA 62.967 66.667 2.24 0.00 35.23 5.36
45 46 4.636435 ACGGCCCTGGTTCAACGG 62.636 66.667 0.00 0.00 0.00 4.44
46 47 1.730451 AAAACGGCCCTGGTTCAACG 61.730 55.000 0.00 0.00 0.00 4.10
47 48 0.249280 CAAAACGGCCCTGGTTCAAC 60.249 55.000 0.00 0.00 0.00 3.18
48 49 0.684805 ACAAAACGGCCCTGGTTCAA 60.685 50.000 0.00 0.00 0.00 2.69
49 50 1.076632 ACAAAACGGCCCTGGTTCA 60.077 52.632 0.00 0.00 0.00 3.18
50 51 1.362355 CACAAAACGGCCCTGGTTC 59.638 57.895 0.00 0.00 0.00 3.62
51 52 2.131067 CCACAAAACGGCCCTGGTT 61.131 57.895 0.00 0.00 0.00 3.67
52 53 2.520741 CCACAAAACGGCCCTGGT 60.521 61.111 0.00 0.00 0.00 4.00
53 54 3.989787 GCCACAAAACGGCCCTGG 61.990 66.667 0.00 0.00 44.22 4.45
59 60 3.666253 GGGTCGGCCACAAAACGG 61.666 66.667 9.07 0.00 36.17 4.44
60 61 2.734948 TAGGGGTCGGCCACAAAACG 62.735 60.000 12.87 0.00 41.86 3.60
61 62 0.323087 ATAGGGGTCGGCCACAAAAC 60.323 55.000 12.87 0.00 41.86 2.43
62 63 1.287217 TATAGGGGTCGGCCACAAAA 58.713 50.000 12.87 0.00 41.86 2.44
63 64 1.513858 ATATAGGGGTCGGCCACAAA 58.486 50.000 12.87 0.00 41.86 2.83
64 65 2.402182 TATATAGGGGTCGGCCACAA 57.598 50.000 12.87 0.00 41.86 3.33
65 66 2.184533 CATATATAGGGGTCGGCCACA 58.815 52.381 12.87 0.00 41.86 4.17
66 67 2.185387 ACATATATAGGGGTCGGCCAC 58.815 52.381 9.07 3.04 38.88 5.01
67 68 2.634639 ACATATATAGGGGTCGGCCA 57.365 50.000 9.07 0.00 36.17 5.36
68 69 3.994931 AAACATATATAGGGGTCGGCC 57.005 47.619 0.00 0.00 0.00 6.13
69 70 6.412214 ACATAAAACATATATAGGGGTCGGC 58.588 40.000 0.00 0.00 0.00 5.54
70 71 8.857694 AAACATAAAACATATATAGGGGTCGG 57.142 34.615 0.00 0.00 0.00 4.79
149 150 1.613785 CGGGGTGGACGGGAATAAAAA 60.614 52.381 0.00 0.00 0.00 1.94
150 151 0.035247 CGGGGTGGACGGGAATAAAA 60.035 55.000 0.00 0.00 0.00 1.52
151 152 1.603306 CGGGGTGGACGGGAATAAA 59.397 57.895 0.00 0.00 0.00 1.40
152 153 3.311725 CGGGGTGGACGGGAATAA 58.688 61.111 0.00 0.00 0.00 1.40
162 163 2.038269 CAAATCGTGTCCGGGGTGG 61.038 63.158 0.00 0.00 40.09 4.61
163 164 2.038269 CCAAATCGTGTCCGGGGTG 61.038 63.158 0.00 0.00 33.95 4.61
164 165 2.349755 CCAAATCGTGTCCGGGGT 59.650 61.111 0.00 0.00 33.95 4.95
165 166 2.437716 CCCAAATCGTGTCCGGGG 60.438 66.667 0.00 0.00 32.88 5.73
166 167 2.437716 CCCCAAATCGTGTCCGGG 60.438 66.667 0.00 0.00 36.59 5.73
167 168 2.038269 CACCCCAAATCGTGTCCGG 61.038 63.158 0.00 0.00 33.95 5.14
168 169 2.686816 GCACCCCAAATCGTGTCCG 61.687 63.158 0.00 0.00 32.40 4.79
169 170 2.686816 CGCACCCCAAATCGTGTCC 61.687 63.158 0.00 0.00 32.40 4.02
170 171 2.686816 CCGCACCCCAAATCGTGTC 61.687 63.158 0.00 0.00 32.40 3.67
171 172 2.671619 CCGCACCCCAAATCGTGT 60.672 61.111 0.00 0.00 32.40 4.49
172 173 4.114997 GCCGCACCCCAAATCGTG 62.115 66.667 0.00 0.00 0.00 4.35
201 202 4.444024 CATTGGGTCGTGCGTGCG 62.444 66.667 0.00 0.00 0.00 5.34
202 203 4.101790 CCATTGGGTCGTGCGTGC 62.102 66.667 0.00 0.00 0.00 5.34
203 204 2.358125 TCCATTGGGTCGTGCGTG 60.358 61.111 2.09 0.00 34.93 5.34
204 205 2.358247 GTCCATTGGGTCGTGCGT 60.358 61.111 2.09 0.00 34.93 5.24
205 206 2.358125 TGTCCATTGGGTCGTGCG 60.358 61.111 2.09 0.00 34.93 5.34
206 207 1.577328 CTGTGTCCATTGGGTCGTGC 61.577 60.000 2.09 0.00 34.93 5.34
207 208 0.250295 ACTGTGTCCATTGGGTCGTG 60.250 55.000 2.09 0.00 34.93 4.35
208 209 0.034896 GACTGTGTCCATTGGGTCGT 59.965 55.000 2.09 0.00 34.93 4.34
209 210 1.014044 CGACTGTGTCCATTGGGTCG 61.014 60.000 14.25 14.25 39.95 4.79
210 211 0.673644 CCGACTGTGTCCATTGGGTC 60.674 60.000 2.09 1.08 34.93 4.46
211 212 1.125093 TCCGACTGTGTCCATTGGGT 61.125 55.000 2.09 0.00 34.93 4.51
212 213 0.673644 GTCCGACTGTGTCCATTGGG 60.674 60.000 2.09 0.00 0.00 4.12
213 214 0.034756 TGTCCGACTGTGTCCATTGG 59.965 55.000 0.00 0.00 0.00 3.16
214 215 1.148310 GTGTCCGACTGTGTCCATTG 58.852 55.000 0.00 0.00 0.00 2.82
215 216 0.319555 CGTGTCCGACTGTGTCCATT 60.320 55.000 0.00 0.00 35.63 3.16
216 217 1.289066 CGTGTCCGACTGTGTCCAT 59.711 57.895 0.00 0.00 35.63 3.41
217 218 2.122797 ACGTGTCCGACTGTGTCCA 61.123 57.895 0.00 0.00 37.88 4.02
218 219 1.660575 CACGTGTCCGACTGTGTCC 60.661 63.158 7.58 0.00 37.88 4.02
219 220 2.300787 GCACGTGTCCGACTGTGTC 61.301 63.158 18.38 11.63 37.88 3.67
220 221 2.279252 GCACGTGTCCGACTGTGT 60.279 61.111 18.38 5.93 37.88 3.72
221 222 3.394874 CGCACGTGTCCGACTGTG 61.395 66.667 18.38 15.84 37.88 3.66
222 223 3.128632 TTCGCACGTGTCCGACTGT 62.129 57.895 18.38 0.00 37.88 3.55
223 224 2.354188 TTCGCACGTGTCCGACTG 60.354 61.111 18.38 0.00 37.88 3.51
224 225 2.354305 GTTCGCACGTGTCCGACT 60.354 61.111 18.38 0.00 37.88 4.18
225 226 3.400590 GGTTCGCACGTGTCCGAC 61.401 66.667 18.38 12.09 37.88 4.79
226 227 4.651008 GGGTTCGCACGTGTCCGA 62.651 66.667 18.38 15.51 37.88 4.55
227 228 4.953868 TGGGTTCGCACGTGTCCG 62.954 66.667 18.38 13.26 40.83 4.79
228 229 2.358247 ATGGGTTCGCACGTGTCC 60.358 61.111 18.38 13.85 0.00 4.02
229 230 2.726691 CGATGGGTTCGCACGTGTC 61.727 63.158 18.38 8.63 41.69 3.67
230 231 2.736995 CGATGGGTTCGCACGTGT 60.737 61.111 18.38 0.00 41.69 4.49
231 232 3.487202 CCGATGGGTTCGCACGTG 61.487 66.667 12.28 12.28 46.71 4.49
252 253 0.894835 CCGGAATTTGTCCCTTTGGG 59.105 55.000 0.00 0.00 44.60 4.12
253 254 0.246360 GCCGGAATTTGTCCCTTTGG 59.754 55.000 5.05 0.00 44.60 3.28
254 255 0.246360 GGCCGGAATTTGTCCCTTTG 59.754 55.000 5.05 0.00 44.60 2.77
255 256 0.178947 TGGCCGGAATTTGTCCCTTT 60.179 50.000 5.05 0.00 44.60 3.11
256 257 0.178947 TTGGCCGGAATTTGTCCCTT 60.179 50.000 5.05 0.00 44.60 3.95
257 258 0.041090 ATTGGCCGGAATTTGTCCCT 59.959 50.000 5.05 0.00 44.60 4.20
258 259 0.459899 GATTGGCCGGAATTTGTCCC 59.540 55.000 5.05 0.00 44.60 4.46
259 260 1.134946 CAGATTGGCCGGAATTTGTCC 59.865 52.381 5.05 0.00 43.90 4.02
260 261 1.134946 CCAGATTGGCCGGAATTTGTC 59.865 52.381 5.05 0.00 0.00 3.18
261 262 1.185315 CCAGATTGGCCGGAATTTGT 58.815 50.000 5.05 0.00 0.00 2.83
262 263 1.134946 GTCCAGATTGGCCGGAATTTG 59.865 52.381 5.05 2.17 37.47 2.32
263 264 1.474330 GTCCAGATTGGCCGGAATTT 58.526 50.000 5.05 0.00 37.47 1.82
264 265 0.748005 CGTCCAGATTGGCCGGAATT 60.748 55.000 5.05 0.00 34.91 2.17
265 266 1.153168 CGTCCAGATTGGCCGGAAT 60.153 57.895 5.05 0.00 34.91 3.01
266 267 2.267642 CGTCCAGATTGGCCGGAA 59.732 61.111 5.05 0.00 34.91 4.30
267 268 3.000819 ACGTCCAGATTGGCCGGA 61.001 61.111 5.05 0.00 44.12 5.14
268 269 2.511600 GACGTCCAGATTGGCCGG 60.512 66.667 3.51 0.00 44.12 6.13
269 270 2.511600 GGACGTCCAGATTGGCCG 60.512 66.667 29.75 0.00 45.50 6.13
270 271 2.511600 CGGACGTCCAGATTGGCC 60.512 66.667 32.80 4.66 37.47 5.36
271 272 0.953960 AAACGGACGTCCAGATTGGC 60.954 55.000 32.80 4.76 37.47 4.52
272 273 0.796312 CAAACGGACGTCCAGATTGG 59.204 55.000 32.80 18.20 39.43 3.16
273 274 0.796312 CCAAACGGACGTCCAGATTG 59.204 55.000 32.80 29.08 35.14 2.67
274 275 0.321298 CCCAAACGGACGTCCAGATT 60.321 55.000 32.80 21.85 35.14 2.40
275 276 1.295423 CCCAAACGGACGTCCAGAT 59.705 57.895 32.80 17.63 35.14 2.90
276 277 2.738480 CCCAAACGGACGTCCAGA 59.262 61.111 32.80 0.00 35.14 3.86
277 278 2.358247 CCCCAAACGGACGTCCAG 60.358 66.667 32.80 25.84 35.14 3.86
278 279 3.162858 ACCCCAAACGGACGTCCA 61.163 61.111 32.80 0.00 35.14 4.02
279 280 2.357881 GACCCCAAACGGACGTCC 60.358 66.667 25.28 25.28 0.00 4.79
280 281 2.735857 CGACCCCAAACGGACGTC 60.736 66.667 7.13 7.13 0.00 4.34
281 282 4.974989 GCGACCCCAAACGGACGT 62.975 66.667 0.00 0.00 34.99 4.34
288 289 4.745751 CTACCGCGCGACCCCAAA 62.746 66.667 34.63 6.92 0.00 3.28
292 293 4.125695 AACTCTACCGCGCGACCC 62.126 66.667 34.63 0.00 0.00 4.46
293 294 2.879462 CAACTCTACCGCGCGACC 60.879 66.667 34.63 0.00 0.00 4.79
294 295 2.879462 CCAACTCTACCGCGCGAC 60.879 66.667 34.63 0.00 0.00 5.19
295 296 4.789075 GCCAACTCTACCGCGCGA 62.789 66.667 34.63 11.99 0.00 5.87
297 298 2.567564 TTAGGCCAACTCTACCGCGC 62.568 60.000 5.01 0.00 0.00 6.86
298 299 0.108520 TTTAGGCCAACTCTACCGCG 60.109 55.000 5.01 0.00 0.00 6.46
299 300 1.653151 CTTTAGGCCAACTCTACCGC 58.347 55.000 5.01 0.00 0.00 5.68
300 301 1.829222 TCCTTTAGGCCAACTCTACCG 59.171 52.381 5.01 0.00 34.44 4.02
301 302 2.170817 CCTCCTTTAGGCCAACTCTACC 59.829 54.545 5.01 0.00 38.97 3.18
302 303 3.545366 CCTCCTTTAGGCCAACTCTAC 57.455 52.381 5.01 0.00 38.97 2.59
313 314 2.996631 AGATTGCAGCACCTCCTTTAG 58.003 47.619 0.00 0.00 0.00 1.85
314 315 3.439857 AAGATTGCAGCACCTCCTTTA 57.560 42.857 0.00 0.00 0.00 1.85
315 316 2.299326 AAGATTGCAGCACCTCCTTT 57.701 45.000 0.00 0.00 0.00 3.11
316 317 2.298163 CAAAAGATTGCAGCACCTCCTT 59.702 45.455 0.00 0.00 0.00 3.36
317 318 1.891150 CAAAAGATTGCAGCACCTCCT 59.109 47.619 0.00 0.00 0.00 3.69
318 319 1.888512 TCAAAAGATTGCAGCACCTCC 59.111 47.619 0.00 0.00 36.45 4.30
319 320 3.863142 ATCAAAAGATTGCAGCACCTC 57.137 42.857 0.00 0.00 36.45 3.85
320 321 4.338879 ACTATCAAAAGATTGCAGCACCT 58.661 39.130 0.00 0.00 36.45 4.00
321 322 4.708726 ACTATCAAAAGATTGCAGCACC 57.291 40.909 0.00 0.00 36.45 5.01
322 323 7.274250 CCTAAAACTATCAAAAGATTGCAGCAC 59.726 37.037 0.00 0.00 36.45 4.40
323 324 7.315142 CCTAAAACTATCAAAAGATTGCAGCA 58.685 34.615 0.00 0.00 36.45 4.41
324 325 6.753744 CCCTAAAACTATCAAAAGATTGCAGC 59.246 38.462 0.00 0.00 36.45 5.25
325 326 7.830739 ACCCTAAAACTATCAAAAGATTGCAG 58.169 34.615 0.00 0.00 36.45 4.41
326 327 7.775053 ACCCTAAAACTATCAAAAGATTGCA 57.225 32.000 0.00 0.00 36.45 4.08
327 328 9.174166 TCTACCCTAAAACTATCAAAAGATTGC 57.826 33.333 0.00 0.00 36.45 3.56
330 331 9.892130 CACTCTACCCTAAAACTATCAAAAGAT 57.108 33.333 0.00 0.00 0.00 2.40
331 332 8.319146 CCACTCTACCCTAAAACTATCAAAAGA 58.681 37.037 0.00 0.00 0.00 2.52
332 333 8.319146 TCCACTCTACCCTAAAACTATCAAAAG 58.681 37.037 0.00 0.00 0.00 2.27
333 334 8.209802 TCCACTCTACCCTAAAACTATCAAAA 57.790 34.615 0.00 0.00 0.00 2.44
334 335 7.801893 TCCACTCTACCCTAAAACTATCAAA 57.198 36.000 0.00 0.00 0.00 2.69
335 336 7.622081 TGATCCACTCTACCCTAAAACTATCAA 59.378 37.037 0.00 0.00 0.00 2.57
336 337 7.130099 TGATCCACTCTACCCTAAAACTATCA 58.870 38.462 0.00 0.00 0.00 2.15
337 338 7.256012 CCTGATCCACTCTACCCTAAAACTATC 60.256 44.444 0.00 0.00 0.00 2.08
338 339 6.555360 CCTGATCCACTCTACCCTAAAACTAT 59.445 42.308 0.00 0.00 0.00 2.12
339 340 5.897824 CCTGATCCACTCTACCCTAAAACTA 59.102 44.000 0.00 0.00 0.00 2.24
340 341 4.717280 CCTGATCCACTCTACCCTAAAACT 59.283 45.833 0.00 0.00 0.00 2.66
341 342 4.683671 GCCTGATCCACTCTACCCTAAAAC 60.684 50.000 0.00 0.00 0.00 2.43
342 343 3.454812 GCCTGATCCACTCTACCCTAAAA 59.545 47.826 0.00 0.00 0.00 1.52
343 344 3.039011 GCCTGATCCACTCTACCCTAAA 58.961 50.000 0.00 0.00 0.00 1.85
344 345 2.679082 GCCTGATCCACTCTACCCTAA 58.321 52.381 0.00 0.00 0.00 2.69
345 346 1.478837 CGCCTGATCCACTCTACCCTA 60.479 57.143 0.00 0.00 0.00 3.53
346 347 0.757188 CGCCTGATCCACTCTACCCT 60.757 60.000 0.00 0.00 0.00 4.34
347 348 1.742768 CGCCTGATCCACTCTACCC 59.257 63.158 0.00 0.00 0.00 3.69
348 349 1.742768 CCGCCTGATCCACTCTACC 59.257 63.158 0.00 0.00 0.00 3.18
349 350 1.068250 GCCGCCTGATCCACTCTAC 59.932 63.158 0.00 0.00 0.00 2.59
350 351 2.134287 GGCCGCCTGATCCACTCTA 61.134 63.158 0.71 0.00 0.00 2.43
351 352 3.474570 GGCCGCCTGATCCACTCT 61.475 66.667 0.71 0.00 0.00 3.24
352 353 3.474570 AGGCCGCCTGATCCACTC 61.475 66.667 12.38 0.00 29.57 3.51
361 362 1.750399 CAACATTAGCAGGCCGCCT 60.750 57.895 5.94 5.94 44.04 5.52
362 363 2.800736 CAACATTAGCAGGCCGCC 59.199 61.111 14.64 0.00 44.04 6.13
363 364 2.102946 GCAACATTAGCAGGCCGC 59.897 61.111 11.02 11.02 42.91 6.53
364 365 2.800736 GGCAACATTAGCAGGCCG 59.199 61.111 0.00 0.00 34.56 6.13
365 366 4.016838 TGGCAACATTAGCAGGCC 57.983 55.556 0.00 0.00 46.17 5.19
376 377 1.737793 AGCTAACTTATGCGTGGCAAC 59.262 47.619 0.00 0.00 43.62 4.17
377 378 2.107950 AGCTAACTTATGCGTGGCAA 57.892 45.000 0.00 0.00 43.62 4.52
378 379 2.971660 TAGCTAACTTATGCGTGGCA 57.028 45.000 0.00 0.00 44.86 4.92
379 380 3.621715 ACTTTAGCTAACTTATGCGTGGC 59.378 43.478 5.45 0.00 0.00 5.01
380 381 5.462398 CCTACTTTAGCTAACTTATGCGTGG 59.538 44.000 5.45 0.00 0.00 4.94
381 382 6.019801 CACCTACTTTAGCTAACTTATGCGTG 60.020 42.308 5.45 3.68 0.00 5.34
382 383 6.040878 CACCTACTTTAGCTAACTTATGCGT 58.959 40.000 5.45 0.00 0.00 5.24
383 384 6.040878 ACACCTACTTTAGCTAACTTATGCG 58.959 40.000 5.45 0.00 0.00 4.73
384 385 7.201617 CCAACACCTACTTTAGCTAACTTATGC 60.202 40.741 5.45 0.00 0.00 3.14
385 386 7.822822 ACCAACACCTACTTTAGCTAACTTATG 59.177 37.037 5.45 3.22 0.00 1.90
386 387 7.822822 CACCAACACCTACTTTAGCTAACTTAT 59.177 37.037 5.45 0.00 0.00 1.73
387 388 7.015487 TCACCAACACCTACTTTAGCTAACTTA 59.985 37.037 5.45 0.00 0.00 2.24
388 389 5.995897 CACCAACACCTACTTTAGCTAACTT 59.004 40.000 5.45 0.00 0.00 2.66
389 390 5.306160 TCACCAACACCTACTTTAGCTAACT 59.694 40.000 5.45 0.00 0.00 2.24
390 391 5.544650 TCACCAACACCTACTTTAGCTAAC 58.455 41.667 5.45 0.00 0.00 2.34
391 392 5.811796 TCACCAACACCTACTTTAGCTAA 57.188 39.130 0.86 0.86 0.00 3.09
392 393 7.484993 TTATCACCAACACCTACTTTAGCTA 57.515 36.000 0.00 0.00 0.00 3.32
393 394 4.910458 ATCACCAACACCTACTTTAGCT 57.090 40.909 0.00 0.00 0.00 3.32
394 395 7.048512 AGATTATCACCAACACCTACTTTAGC 58.951 38.462 0.00 0.00 0.00 3.09
395 396 9.449719 AAAGATTATCACCAACACCTACTTTAG 57.550 33.333 0.00 0.00 0.00 1.85
396 397 9.226606 CAAAGATTATCACCAACACCTACTTTA 57.773 33.333 0.00 0.00 0.00 1.85
397 398 7.724061 ACAAAGATTATCACCAACACCTACTTT 59.276 33.333 0.00 0.00 0.00 2.66
398 399 7.231467 ACAAAGATTATCACCAACACCTACTT 58.769 34.615 0.00 0.00 0.00 2.24
399 400 6.779860 ACAAAGATTATCACCAACACCTACT 58.220 36.000 0.00 0.00 0.00 2.57
400 401 8.556213 TTACAAAGATTATCACCAACACCTAC 57.444 34.615 0.00 0.00 0.00 3.18
401 402 7.827236 CCTTACAAAGATTATCACCAACACCTA 59.173 37.037 0.00 0.00 0.00 3.08
402 403 6.659242 CCTTACAAAGATTATCACCAACACCT 59.341 38.462 0.00 0.00 0.00 4.00
403 404 6.433093 ACCTTACAAAGATTATCACCAACACC 59.567 38.462 0.00 0.00 0.00 4.16
404 405 7.448748 ACCTTACAAAGATTATCACCAACAC 57.551 36.000 0.00 0.00 0.00 3.32
405 406 8.356657 CAAACCTTACAAAGATTATCACCAACA 58.643 33.333 0.00 0.00 0.00 3.33
406 407 7.812669 CCAAACCTTACAAAGATTATCACCAAC 59.187 37.037 0.00 0.00 0.00 3.77
407 408 7.726291 TCCAAACCTTACAAAGATTATCACCAA 59.274 33.333 0.00 0.00 0.00 3.67
408 409 7.235079 TCCAAACCTTACAAAGATTATCACCA 58.765 34.615 0.00 0.00 0.00 4.17
409 410 7.696992 TCCAAACCTTACAAAGATTATCACC 57.303 36.000 0.00 0.00 0.00 4.02
410 411 9.573133 CAATCCAAACCTTACAAAGATTATCAC 57.427 33.333 0.00 0.00 0.00 3.06
411 412 8.748412 CCAATCCAAACCTTACAAAGATTATCA 58.252 33.333 0.00 0.00 0.00 2.15
412 413 8.197439 CCCAATCCAAACCTTACAAAGATTATC 58.803 37.037 0.00 0.00 0.00 1.75
413 414 7.125659 CCCCAATCCAAACCTTACAAAGATTAT 59.874 37.037 0.00 0.00 0.00 1.28
414 415 6.439058 CCCCAATCCAAACCTTACAAAGATTA 59.561 38.462 0.00 0.00 0.00 1.75
415 416 5.248248 CCCCAATCCAAACCTTACAAAGATT 59.752 40.000 0.00 0.00 0.00 2.40
416 417 4.777366 CCCCAATCCAAACCTTACAAAGAT 59.223 41.667 0.00 0.00 0.00 2.40
417 418 4.156477 CCCCAATCCAAACCTTACAAAGA 58.844 43.478 0.00 0.00 0.00 2.52
418 419 3.306710 GCCCCAATCCAAACCTTACAAAG 60.307 47.826 0.00 0.00 0.00 2.77
419 420 2.635427 GCCCCAATCCAAACCTTACAAA 59.365 45.455 0.00 0.00 0.00 2.83
420 421 2.158234 AGCCCCAATCCAAACCTTACAA 60.158 45.455 0.00 0.00 0.00 2.41
421 422 1.431243 AGCCCCAATCCAAACCTTACA 59.569 47.619 0.00 0.00 0.00 2.41
422 423 2.100197 GAGCCCCAATCCAAACCTTAC 58.900 52.381 0.00 0.00 0.00 2.34
423 424 1.006639 GGAGCCCCAATCCAAACCTTA 59.993 52.381 0.00 0.00 36.79 2.69
424 425 0.252239 GGAGCCCCAATCCAAACCTT 60.252 55.000 0.00 0.00 36.79 3.50
425 426 1.388133 GGAGCCCCAATCCAAACCT 59.612 57.895 0.00 0.00 36.79 3.50
426 427 1.685765 GGGAGCCCCAATCCAAACC 60.686 63.158 5.45 0.00 44.65 3.27
427 428 4.034246 GGGAGCCCCAATCCAAAC 57.966 61.111 5.45 0.00 44.65 2.93
437 438 0.106967 GAATGAAGTCTGGGGAGCCC 60.107 60.000 0.00 0.00 45.71 5.19
438 439 0.915364 AGAATGAAGTCTGGGGAGCC 59.085 55.000 0.00 0.00 0.00 4.70
439 440 1.556911 TGAGAATGAAGTCTGGGGAGC 59.443 52.381 0.00 0.00 0.00 4.70
440 441 3.988976 TTGAGAATGAAGTCTGGGGAG 57.011 47.619 0.00 0.00 0.00 4.30
441 442 3.588842 ACATTGAGAATGAAGTCTGGGGA 59.411 43.478 3.35 0.00 41.46 4.81
442 443 3.960571 ACATTGAGAATGAAGTCTGGGG 58.039 45.455 3.35 0.00 41.46 4.96
443 444 7.636150 AATTACATTGAGAATGAAGTCTGGG 57.364 36.000 3.35 0.00 41.46 4.45
444 445 7.907045 CGAAATTACATTGAGAATGAAGTCTGG 59.093 37.037 3.35 0.00 41.46 3.86
445 446 7.907045 CCGAAATTACATTGAGAATGAAGTCTG 59.093 37.037 3.35 0.00 41.46 3.51
446 447 7.824289 TCCGAAATTACATTGAGAATGAAGTCT 59.176 33.333 3.35 0.00 41.46 3.24
447 448 7.974675 TCCGAAATTACATTGAGAATGAAGTC 58.025 34.615 3.35 0.00 41.46 3.01
448 449 7.921786 TCCGAAATTACATTGAGAATGAAGT 57.078 32.000 3.35 0.00 41.46 3.01
449 450 8.615211 TCATCCGAAATTACATTGAGAATGAAG 58.385 33.333 3.35 0.00 41.46 3.02
450 451 8.397906 GTCATCCGAAATTACATTGAGAATGAA 58.602 33.333 3.35 0.00 41.46 2.57
451 452 7.552330 TGTCATCCGAAATTACATTGAGAATGA 59.448 33.333 3.35 0.00 41.46 2.57
452 453 7.696755 TGTCATCCGAAATTACATTGAGAATG 58.303 34.615 0.00 0.00 44.48 2.67
453 454 7.864108 TGTCATCCGAAATTACATTGAGAAT 57.136 32.000 0.00 0.00 0.00 2.40
454 455 7.864108 ATGTCATCCGAAATTACATTGAGAA 57.136 32.000 0.00 0.00 0.00 2.87
455 456 7.864108 AATGTCATCCGAAATTACATTGAGA 57.136 32.000 8.56 0.00 38.85 3.27
456 457 7.374228 CGAAATGTCATCCGAAATTACATTGAG 59.626 37.037 9.58 5.47 39.88 3.02
457 458 7.065204 TCGAAATGTCATCCGAAATTACATTGA 59.935 33.333 9.58 3.96 39.88 2.57
458 459 7.186128 TCGAAATGTCATCCGAAATTACATTG 58.814 34.615 9.58 2.34 39.88 2.82
459 460 7.315247 TCGAAATGTCATCCGAAATTACATT 57.685 32.000 7.54 0.00 41.29 2.71
460 461 6.511767 GCTCGAAATGTCATCCGAAATTACAT 60.512 38.462 10.28 0.00 28.33 2.29
461 462 5.220586 GCTCGAAATGTCATCCGAAATTACA 60.221 40.000 10.28 0.00 28.33 2.41
462 463 5.006746 AGCTCGAAATGTCATCCGAAATTAC 59.993 40.000 10.28 0.00 28.33 1.89
463 464 5.116180 AGCTCGAAATGTCATCCGAAATTA 58.884 37.500 10.28 0.00 28.33 1.40
464 465 3.941483 AGCTCGAAATGTCATCCGAAATT 59.059 39.130 10.28 0.00 29.68 1.82
465 466 3.535561 AGCTCGAAATGTCATCCGAAAT 58.464 40.909 10.28 2.02 0.00 2.17
466 467 2.972625 AGCTCGAAATGTCATCCGAAA 58.027 42.857 10.28 0.00 0.00 3.46
467 468 2.672961 AGCTCGAAATGTCATCCGAA 57.327 45.000 10.28 0.00 0.00 4.30
468 469 3.552890 CCATAGCTCGAAATGTCATCCGA 60.553 47.826 0.00 9.13 0.00 4.55
469 470 2.733552 CCATAGCTCGAAATGTCATCCG 59.266 50.000 0.00 2.25 0.00 4.18
470 471 3.733337 ACCATAGCTCGAAATGTCATCC 58.267 45.455 0.00 0.00 0.00 3.51
471 472 6.844696 TTAACCATAGCTCGAAATGTCATC 57.155 37.500 0.00 0.00 0.00 2.92
472 473 7.807977 ATTTAACCATAGCTCGAAATGTCAT 57.192 32.000 0.00 0.00 0.00 3.06
473 474 8.725405 TTATTTAACCATAGCTCGAAATGTCA 57.275 30.769 0.00 0.00 0.00 3.58
474 475 9.651718 CTTTATTTAACCATAGCTCGAAATGTC 57.348 33.333 0.00 0.00 0.00 3.06
475 476 9.174166 ACTTTATTTAACCATAGCTCGAAATGT 57.826 29.630 0.00 0.00 0.00 2.71
476 477 9.438291 CACTTTATTTAACCATAGCTCGAAATG 57.562 33.333 0.00 0.00 0.00 2.32
477 478 8.621286 CCACTTTATTTAACCATAGCTCGAAAT 58.379 33.333 0.00 0.00 0.00 2.17
478 479 7.414762 GCCACTTTATTTAACCATAGCTCGAAA 60.415 37.037 0.00 0.00 0.00 3.46
479 480 6.037830 GCCACTTTATTTAACCATAGCTCGAA 59.962 38.462 0.00 0.00 0.00 3.71
480 481 5.526111 GCCACTTTATTTAACCATAGCTCGA 59.474 40.000 0.00 0.00 0.00 4.04
481 482 5.295787 TGCCACTTTATTTAACCATAGCTCG 59.704 40.000 0.00 0.00 0.00 5.03
482 483 6.693315 TGCCACTTTATTTAACCATAGCTC 57.307 37.500 0.00 0.00 0.00 4.09
483 484 6.404293 CGTTGCCACTTTATTTAACCATAGCT 60.404 38.462 0.00 0.00 0.00 3.32
484 485 5.741982 CGTTGCCACTTTATTTAACCATAGC 59.258 40.000 0.00 0.00 0.00 2.97
485 486 6.848451 ACGTTGCCACTTTATTTAACCATAG 58.152 36.000 0.00 0.00 0.00 2.23
486 487 6.821031 ACGTTGCCACTTTATTTAACCATA 57.179 33.333 0.00 0.00 0.00 2.74
487 488 5.715434 ACGTTGCCACTTTATTTAACCAT 57.285 34.783 0.00 0.00 0.00 3.55
488 489 5.517322 AACGTTGCCACTTTATTTAACCA 57.483 34.783 0.00 0.00 0.00 3.67
489 490 6.363088 GGTTAACGTTGCCACTTTATTTAACC 59.637 38.462 11.99 7.98 39.73 2.85
490 491 7.140705 AGGTTAACGTTGCCACTTTATTTAAC 58.859 34.615 20.71 9.11 0.00 2.01
491 492 7.013083 TGAGGTTAACGTTGCCACTTTATTTAA 59.987 33.333 20.71 0.00 0.00 1.52
492 493 6.485984 TGAGGTTAACGTTGCCACTTTATTTA 59.514 34.615 20.71 0.81 0.00 1.40
493 494 5.299782 TGAGGTTAACGTTGCCACTTTATTT 59.700 36.000 20.71 3.09 0.00 1.40
494 495 4.822896 TGAGGTTAACGTTGCCACTTTATT 59.177 37.500 20.71 3.67 0.00 1.40
495 496 4.391155 TGAGGTTAACGTTGCCACTTTAT 58.609 39.130 20.71 4.25 0.00 1.40
496 497 3.806380 TGAGGTTAACGTTGCCACTTTA 58.194 40.909 20.71 3.85 0.00 1.85
497 498 2.645802 TGAGGTTAACGTTGCCACTTT 58.354 42.857 20.71 5.13 0.00 2.66
498 499 2.335316 TGAGGTTAACGTTGCCACTT 57.665 45.000 20.71 8.47 0.00 3.16
499 500 2.335316 TTGAGGTTAACGTTGCCACT 57.665 45.000 20.71 10.36 0.00 4.00
500 501 3.423996 TTTTGAGGTTAACGTTGCCAC 57.576 42.857 20.71 16.30 0.00 5.01
522 523 0.391927 TCGATCGCGGGGATGTTTTT 60.392 50.000 11.09 0.00 34.82 1.94
523 524 1.087771 GTCGATCGCGGGGATGTTTT 61.088 55.000 11.09 0.00 34.82 2.43
524 525 1.520787 GTCGATCGCGGGGATGTTT 60.521 57.895 11.09 0.00 34.82 2.83
525 526 2.106332 GTCGATCGCGGGGATGTT 59.894 61.111 11.09 0.00 34.82 2.71
526 527 4.266070 CGTCGATCGCGGGGATGT 62.266 66.667 19.53 0.00 34.82 3.06
527 528 3.881092 CTCGTCGATCGCGGGGATG 62.881 68.421 24.29 7.05 39.67 3.51
528 529 3.661131 CTCGTCGATCGCGGGGAT 61.661 66.667 24.29 7.33 39.67 3.85
572 573 0.171903 ACGTACCTACACATGCCGAC 59.828 55.000 0.00 0.00 0.00 4.79
605 606 3.181503 GCCTAGTCATTTCAGTACGACGA 60.182 47.826 0.00 0.00 33.56 4.20
646 648 2.358957 TGCTGGAACGATTGGATTCTG 58.641 47.619 0.00 0.00 0.00 3.02
651 653 2.221169 GCATATGCTGGAACGATTGGA 58.779 47.619 20.64 0.00 38.21 3.53
658 660 3.879912 GCATGGCATATGCTGGAAC 57.120 52.632 26.12 10.51 41.52 3.62
681 683 1.999735 TCGGACGCAAAACTCATGATC 59.000 47.619 0.00 0.00 0.00 2.92
727 734 4.832823 AGGAATTTCCATGGAAACGAAACT 59.167 37.500 36.31 26.02 45.34 2.66
759 793 1.139853 GGTCCTAGAGCAATCCAGTGG 59.860 57.143 1.40 1.40 0.00 4.00
765 799 0.032815 GCCGAGGTCCTAGAGCAATC 59.967 60.000 0.00 0.00 31.89 2.67
768 802 2.442272 GGCCGAGGTCCTAGAGCA 60.442 66.667 0.00 0.00 31.89 4.26
769 803 2.123640 AGGCCGAGGTCCTAGAGC 60.124 66.667 0.00 2.58 30.79 4.09
770 804 2.494530 GCAGGCCGAGGTCCTAGAG 61.495 68.421 0.00 0.00 31.52 2.43
771 805 2.442272 GCAGGCCGAGGTCCTAGA 60.442 66.667 0.00 0.00 31.52 2.43
772 806 3.541713 GGCAGGCCGAGGTCCTAG 61.542 72.222 0.00 0.00 31.52 3.02
796 832 0.321021 AGTTCACAGGAGCAGAGCAG 59.679 55.000 0.00 0.00 0.00 4.24
806 875 2.945668 GGGCTTAGCATTAGTTCACAGG 59.054 50.000 6.53 0.00 0.00 4.00
813 909 0.529992 GTCGCGGGCTTAGCATTAGT 60.530 55.000 6.13 0.00 34.19 2.24
818 914 0.037139 TTTAAGTCGCGGGCTTAGCA 60.037 50.000 18.22 10.54 31.13 3.49
819 915 1.081094 TTTTAAGTCGCGGGCTTAGC 58.919 50.000 18.22 0.00 31.13 3.09
821 917 1.799994 GTGTTTTAAGTCGCGGGCTTA 59.200 47.619 6.13 12.80 0.00 3.09
822 918 0.589708 GTGTTTTAAGTCGCGGGCTT 59.410 50.000 17.82 17.82 0.00 4.35
823 919 0.533308 TGTGTTTTAAGTCGCGGGCT 60.533 50.000 6.13 1.59 0.00 5.19
824 920 0.519961 ATGTGTTTTAAGTCGCGGGC 59.480 50.000 6.13 0.00 0.00 6.13
826 922 1.196808 AGCATGTGTTTTAAGTCGCGG 59.803 47.619 6.13 0.00 0.00 6.46
828 924 3.846335 GCTTAGCATGTGTTTTAAGTCGC 59.154 43.478 0.00 0.00 0.00 5.19
830 926 4.217550 TGGGCTTAGCATGTGTTTTAAGTC 59.782 41.667 6.53 0.00 0.00 3.01
831 927 4.022329 GTGGGCTTAGCATGTGTTTTAAGT 60.022 41.667 6.53 0.00 0.00 2.24
832 928 4.485163 GTGGGCTTAGCATGTGTTTTAAG 58.515 43.478 6.53 0.00 0.00 1.85
833 929 3.057876 CGTGGGCTTAGCATGTGTTTTAA 60.058 43.478 6.53 0.00 0.00 1.52
834 930 2.486203 CGTGGGCTTAGCATGTGTTTTA 59.514 45.455 6.53 0.00 0.00 1.52
835 931 1.269448 CGTGGGCTTAGCATGTGTTTT 59.731 47.619 6.53 0.00 0.00 2.43
836 932 0.881118 CGTGGGCTTAGCATGTGTTT 59.119 50.000 6.53 0.00 0.00 2.83
837 933 0.036164 TCGTGGGCTTAGCATGTGTT 59.964 50.000 6.53 0.00 0.00 3.32
838 934 0.673644 GTCGTGGGCTTAGCATGTGT 60.674 55.000 6.53 0.00 0.00 3.72
839 935 1.369091 GGTCGTGGGCTTAGCATGTG 61.369 60.000 6.53 0.00 0.00 3.21
840 936 1.078426 GGTCGTGGGCTTAGCATGT 60.078 57.895 6.53 0.00 0.00 3.21
841 937 0.464036 TAGGTCGTGGGCTTAGCATG 59.536 55.000 6.53 0.00 0.00 4.06
842 938 1.200519 TTAGGTCGTGGGCTTAGCAT 58.799 50.000 6.53 0.00 0.00 3.79
843 939 0.978151 TTTAGGTCGTGGGCTTAGCA 59.022 50.000 6.53 0.00 0.00 3.49
844 940 1.338389 TGTTTAGGTCGTGGGCTTAGC 60.338 52.381 0.00 0.00 0.00 3.09
845 941 2.028385 ACTGTTTAGGTCGTGGGCTTAG 60.028 50.000 0.00 0.00 0.00 2.18
846 942 1.972795 ACTGTTTAGGTCGTGGGCTTA 59.027 47.619 0.00 0.00 0.00 3.09
847 943 0.763035 ACTGTTTAGGTCGTGGGCTT 59.237 50.000 0.00 0.00 0.00 4.35
848 944 1.636148 TACTGTTTAGGTCGTGGGCT 58.364 50.000 0.00 0.00 0.00 5.19
849 945 2.460757 TTACTGTTTAGGTCGTGGGC 57.539 50.000 0.00 0.00 0.00 5.36
850 946 3.495753 GTGTTTACTGTTTAGGTCGTGGG 59.504 47.826 0.00 0.00 0.00 4.61
851 947 3.182972 CGTGTTTACTGTTTAGGTCGTGG 59.817 47.826 0.00 0.00 0.00 4.94
852 948 3.182972 CCGTGTTTACTGTTTAGGTCGTG 59.817 47.826 0.00 0.00 0.00 4.35
853 949 3.068024 TCCGTGTTTACTGTTTAGGTCGT 59.932 43.478 0.00 0.00 0.00 4.34
854 950 3.426525 GTCCGTGTTTACTGTTTAGGTCG 59.573 47.826 0.00 0.00 0.00 4.79
855 951 4.209911 GTGTCCGTGTTTACTGTTTAGGTC 59.790 45.833 0.00 0.00 0.00 3.85
856 952 4.122046 GTGTCCGTGTTTACTGTTTAGGT 58.878 43.478 0.00 0.00 0.00 3.08
857 953 4.374399 AGTGTCCGTGTTTACTGTTTAGG 58.626 43.478 0.00 0.00 0.00 2.69
858 954 7.597743 AGATTAGTGTCCGTGTTTACTGTTTAG 59.402 37.037 0.00 0.00 0.00 1.85
859 955 7.436118 AGATTAGTGTCCGTGTTTACTGTTTA 58.564 34.615 0.00 0.00 0.00 2.01
860 956 6.285990 AGATTAGTGTCCGTGTTTACTGTTT 58.714 36.000 0.00 0.00 0.00 2.83
861 957 5.850614 AGATTAGTGTCCGTGTTTACTGTT 58.149 37.500 0.00 0.00 0.00 3.16
862 958 5.464030 AGATTAGTGTCCGTGTTTACTGT 57.536 39.130 0.00 0.00 0.00 3.55
863 959 6.309737 GGTTAGATTAGTGTCCGTGTTTACTG 59.690 42.308 0.00 0.00 0.00 2.74
864 960 6.393171 GGTTAGATTAGTGTCCGTGTTTACT 58.607 40.000 0.00 0.00 0.00 2.24
865 961 5.578336 GGGTTAGATTAGTGTCCGTGTTTAC 59.422 44.000 0.00 0.00 0.00 2.01
866 962 5.481473 AGGGTTAGATTAGTGTCCGTGTTTA 59.519 40.000 0.00 0.00 0.00 2.01
867 963 4.285260 AGGGTTAGATTAGTGTCCGTGTTT 59.715 41.667 0.00 0.00 0.00 2.83
868 964 3.836562 AGGGTTAGATTAGTGTCCGTGTT 59.163 43.478 0.00 0.00 0.00 3.32
869 965 3.438183 AGGGTTAGATTAGTGTCCGTGT 58.562 45.455 0.00 0.00 0.00 4.49
870 966 3.488721 CGAGGGTTAGATTAGTGTCCGTG 60.489 52.174 0.00 0.00 0.00 4.94
871 967 2.686915 CGAGGGTTAGATTAGTGTCCGT 59.313 50.000 0.00 0.00 0.00 4.69
872 968 2.543238 GCGAGGGTTAGATTAGTGTCCG 60.543 54.545 0.00 0.00 0.00 4.79
873 969 2.223994 GGCGAGGGTTAGATTAGTGTCC 60.224 54.545 0.00 0.00 0.00 4.02
874 970 2.543238 CGGCGAGGGTTAGATTAGTGTC 60.543 54.545 0.00 0.00 0.00 3.67
875 971 1.407979 CGGCGAGGGTTAGATTAGTGT 59.592 52.381 0.00 0.00 0.00 3.55
876 972 1.868519 GCGGCGAGGGTTAGATTAGTG 60.869 57.143 12.98 0.00 0.00 2.74
877 973 0.388294 GCGGCGAGGGTTAGATTAGT 59.612 55.000 12.98 0.00 0.00 2.24
878 974 0.674534 AGCGGCGAGGGTTAGATTAG 59.325 55.000 12.98 0.00 0.00 1.73
879 975 0.387929 CAGCGGCGAGGGTTAGATTA 59.612 55.000 12.98 0.00 0.00 1.75
880 976 1.144057 CAGCGGCGAGGGTTAGATT 59.856 57.895 12.98 0.00 0.00 2.40
881 977 2.017559 GACAGCGGCGAGGGTTAGAT 62.018 60.000 12.98 0.00 0.00 1.98
882 978 2.678934 ACAGCGGCGAGGGTTAGA 60.679 61.111 12.98 0.00 0.00 2.10
883 979 2.202756 GACAGCGGCGAGGGTTAG 60.203 66.667 12.98 0.00 0.00 2.34
884 980 3.766691 GGACAGCGGCGAGGGTTA 61.767 66.667 12.98 0.00 0.00 2.85
896 992 2.635915 TGGGGTTTATATAGGCGGACAG 59.364 50.000 0.00 0.00 0.00 3.51
897 993 2.635915 CTGGGGTTTATATAGGCGGACA 59.364 50.000 0.00 0.00 0.00 4.02
918 1014 1.986210 AAAGAATGGGCTGGGCTGC 60.986 57.895 0.00 0.00 0.00 5.25
935 1031 5.574891 ACACAACACAAGTAAAGATGCAA 57.425 34.783 0.00 0.00 0.00 4.08
1045 1177 2.363018 TGTGGCGAGGAGGAGGAG 60.363 66.667 0.00 0.00 0.00 3.69
1079 1214 2.046217 GAAGAGCGGGGTTGGGAC 60.046 66.667 0.00 0.00 0.00 4.46
1080 1215 3.327404 GGAAGAGCGGGGTTGGGA 61.327 66.667 0.00 0.00 0.00 4.37
1407 1549 1.307355 CGATGCCAGCAACATGTGGA 61.307 55.000 3.77 0.00 35.67 4.02
1409 1551 0.455464 CACGATGCCAGCAACATGTG 60.455 55.000 0.00 0.00 0.00 3.21
1412 1554 0.890542 ACACACGATGCCAGCAACAT 60.891 50.000 0.00 0.00 0.00 2.71
1413 1555 1.506309 GACACACGATGCCAGCAACA 61.506 55.000 0.00 0.00 0.00 3.33
1414 1556 1.207593 GACACACGATGCCAGCAAC 59.792 57.895 0.00 0.00 0.00 4.17
1415 1557 1.965930 GGACACACGATGCCAGCAA 60.966 57.895 0.00 0.00 0.00 3.91
1416 1558 2.358615 GGACACACGATGCCAGCA 60.359 61.111 0.00 0.00 0.00 4.41
1417 1559 3.127533 GGGACACACGATGCCAGC 61.128 66.667 0.00 0.00 0.00 4.85
1418 1560 2.220615 TACGGGACACACGATGCCAG 62.221 60.000 0.00 0.00 34.93 4.85
1419 1561 1.817911 TTACGGGACACACGATGCCA 61.818 55.000 0.00 0.00 34.93 4.92
1420 1562 0.461339 ATTACGGGACACACGATGCC 60.461 55.000 0.00 0.00 34.93 4.40
1421 1563 1.365699 AATTACGGGACACACGATGC 58.634 50.000 0.00 0.00 34.93 3.91
1422 1564 2.739913 ACAAATTACGGGACACACGATG 59.260 45.455 0.00 0.00 34.93 3.84
1428 1571 2.801679 TGACGAACAAATTACGGGACAC 59.198 45.455 0.00 0.00 0.00 3.67
1429 1572 3.061322 CTGACGAACAAATTACGGGACA 58.939 45.455 0.00 0.00 0.00 4.02
1437 1580 6.481976 TGAACTCATACACTGACGAACAAATT 59.518 34.615 0.00 0.00 0.00 1.82
1438 1581 5.989168 TGAACTCATACACTGACGAACAAAT 59.011 36.000 0.00 0.00 0.00 2.32
1441 1584 4.577834 TGAACTCATACACTGACGAACA 57.422 40.909 0.00 0.00 0.00 3.18
1444 1587 5.048013 ACTGAATGAACTCATACACTGACGA 60.048 40.000 0.00 0.00 35.10 4.20
1445 1588 5.164233 ACTGAATGAACTCATACACTGACG 58.836 41.667 0.00 0.00 35.10 4.35
1455 1598 7.011389 CACAAGAACAAGTACTGAATGAACTCA 59.989 37.037 0.00 0.00 0.00 3.41
1456 1599 7.011482 ACACAAGAACAAGTACTGAATGAACTC 59.989 37.037 0.00 0.00 0.00 3.01
1457 1600 6.823689 ACACAAGAACAAGTACTGAATGAACT 59.176 34.615 0.00 0.00 0.00 3.01
1463 1606 4.873827 GGACACACAAGAACAAGTACTGAA 59.126 41.667 0.00 0.00 0.00 3.02
1489 1662 9.929180 CCCGATTGATTCTCTACTTTATTATCA 57.071 33.333 0.00 0.00 0.00 2.15
1490 1663 9.372369 CCCCGATTGATTCTCTACTTTATTATC 57.628 37.037 0.00 0.00 0.00 1.75
1578 1759 2.635714 CGACCTTGTTACATTACCCCC 58.364 52.381 0.00 0.00 0.00 5.40
1579 1760 2.011947 GCGACCTTGTTACATTACCCC 58.988 52.381 0.00 0.00 0.00 4.95
1599 1780 0.798776 GTCCGTCCATGCTGAAACAG 59.201 55.000 0.00 0.00 34.12 3.16
1638 1821 5.518128 CACCAAACAGACGAATCAGAGATAG 59.482 44.000 0.00 0.00 0.00 2.08
1640 1823 4.248859 CACCAAACAGACGAATCAGAGAT 58.751 43.478 0.00 0.00 0.00 2.75
1650 1833 3.805422 TGTTTAGTAGCACCAAACAGACG 59.195 43.478 8.21 0.00 37.27 4.18
1671 1862 7.113965 GTCACAACAATAGCATTTCTCTTTGTG 59.886 37.037 0.00 0.00 33.89 3.33
1672 1863 7.013655 AGTCACAACAATAGCATTTCTCTTTGT 59.986 33.333 0.00 0.00 34.59 2.83
1758 3299 3.441500 AAAGAGAAACAGGGCCTTAGG 57.558 47.619 1.32 0.00 0.00 2.69
1760 3301 4.447138 TGAAAAGAGAAACAGGGCCTTA 57.553 40.909 1.32 0.00 0.00 2.69
1761 3302 3.312736 TGAAAAGAGAAACAGGGCCTT 57.687 42.857 1.32 0.00 0.00 4.35
1762 3303 3.312736 TTGAAAAGAGAAACAGGGCCT 57.687 42.857 0.00 0.00 0.00 5.19
1764 3305 4.082190 GGGTATTGAAAAGAGAAACAGGGC 60.082 45.833 0.00 0.00 0.00 5.19
1765 3306 4.462834 GGGGTATTGAAAAGAGAAACAGGG 59.537 45.833 0.00 0.00 0.00 4.45
1766 3307 5.183904 CAGGGGTATTGAAAAGAGAAACAGG 59.816 44.000 0.00 0.00 0.00 4.00
1767 3308 5.770162 ACAGGGGTATTGAAAAGAGAAACAG 59.230 40.000 0.00 0.00 0.00 3.16
1768 3309 5.701224 ACAGGGGTATTGAAAAGAGAAACA 58.299 37.500 0.00 0.00 0.00 2.83
1805 3353 3.419759 GTGAAACGACGGCCGCAT 61.420 61.111 28.58 6.48 43.32 4.73
1869 3417 9.559958 GATGTATTTCAAAACAGAGGTGTATTG 57.440 33.333 0.00 0.00 35.08 1.90
2007 4699 1.041437 GATCCAACGGTAGGCTAGCT 58.959 55.000 20.35 3.22 0.00 3.32
2008 4700 0.033642 GGATCCAACGGTAGGCTAGC 59.966 60.000 13.62 13.62 0.00 3.42
2009 4701 0.314302 CGGATCCAACGGTAGGCTAG 59.686 60.000 13.41 0.00 0.00 3.42
2010 4702 0.396139 ACGGATCCAACGGTAGGCTA 60.396 55.000 13.41 0.00 35.23 3.93
2047 4739 0.687757 CTCTCCCCGGATCAAGACCA 60.688 60.000 0.73 0.00 0.00 4.02
2124 6123 4.666402 CGGCAAAATCCAAAAATTTCGAGC 60.666 41.667 0.00 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.