Multiple sequence alignment - TraesCS6B01G101800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G101800 chr6B 100.000 6547 0 0 1 6547 79874900 79881446 0.000000e+00 12091.0
1 TraesCS6B01G101800 chr6B 86.311 2681 273 44 2561 5191 57417255 57419891 0.000000e+00 2832.0
2 TraesCS6B01G101800 chr6B 86.366 2281 240 36 3019 5277 57733690 57731459 0.000000e+00 2423.0
3 TraesCS6B01G101800 chr6B 84.488 2121 247 49 3242 5318 56378585 56376503 0.000000e+00 2019.0
4 TraesCS6B01G101800 chr6B 87.173 1645 148 31 2275 3898 56397767 56396165 0.000000e+00 1810.0
5 TraesCS6B01G101800 chr6B 85.571 1296 148 20 3890 5173 56396143 56394875 0.000000e+00 1321.0
6 TraesCS6B01G101800 chr6B 91.153 859 69 5 2948 3805 50409585 50408733 0.000000e+00 1158.0
7 TraesCS6B01G101800 chr6B 88.758 934 80 14 2275 3197 56379613 56378694 0.000000e+00 1120.0
8 TraesCS6B01G101800 chr6B 83.481 678 49 20 1463 2114 57416260 57416900 2.050000e-159 573.0
9 TraesCS6B01G101800 chr6B 81.320 621 45 20 1523 2114 56380283 56379705 7.790000e-119 438.0
10 TraesCS6B01G101800 chr6B 87.419 310 27 5 5109 5410 57731582 57731277 4.860000e-91 346.0
11 TraesCS6B01G101800 chr6B 81.384 419 59 11 79 480 626461973 626461557 2.280000e-84 324.0
12 TraesCS6B01G101800 chr6B 89.140 221 20 1 1656 1872 50410295 50410075 8.370000e-69 272.0
13 TraesCS6B01G101800 chr6B 78.216 482 43 21 6068 6547 57731034 57730613 1.090000e-62 252.0
14 TraesCS6B01G101800 chr6B 77.804 419 70 9 79 480 135085311 135085723 3.050000e-58 237.0
15 TraesCS6B01G101800 chr6B 87.113 194 17 4 1195 1388 57416030 57416215 5.140000e-51 213.0
16 TraesCS6B01G101800 chr6B 88.034 117 5 6 5710 5819 57420180 57420294 5.330000e-26 130.0
17 TraesCS6B01G101800 chr6B 97.222 36 1 0 6030 6065 135505595 135505630 1.970000e-05 62.1
18 TraesCS6B01G101800 chr6B 92.683 41 1 2 6029 6069 260773796 260773758 2.550000e-04 58.4
19 TraesCS6B01G101800 chrUn 95.889 4233 129 28 1177 5382 27471744 27475958 0.000000e+00 6811.0
20 TraesCS6B01G101800 chrUn 91.218 854 69 4 2948 3800 137913395 137912547 0.000000e+00 1157.0
21 TraesCS6B01G101800 chrUn 90.000 550 34 14 6008 6547 27477115 27477653 0.000000e+00 691.0
22 TraesCS6B01G101800 chrUn 80.858 862 92 29 579 1389 312455256 312454417 1.560000e-170 610.0
23 TraesCS6B01G101800 chrUn 80.626 862 94 29 579 1389 268238655 268239494 3.380000e-167 599.0
24 TraesCS6B01G101800 chrUn 87.861 519 46 9 2373 2881 137913906 137913395 1.570000e-165 593.0
25 TraesCS6B01G101800 chrUn 80.023 871 86 39 885 1716 68355464 68356285 1.230000e-156 564.0
26 TraesCS6B01G101800 chrUn 94.769 325 14 1 5626 5950 27476218 27476539 2.720000e-138 503.0
27 TraesCS6B01G101800 chrUn 83.012 518 43 22 494 1002 27471256 27471737 1.690000e-115 427.0
28 TraesCS6B01G101800 chrUn 88.938 226 20 2 1656 1876 137914128 137913903 2.330000e-69 274.0
29 TraesCS6B01G101800 chrUn 90.148 203 5 3 5379 5580 27476038 27476226 3.920000e-62 250.0
30 TraesCS6B01G101800 chrUn 80.299 335 55 8 134 465 280233809 280234135 6.560000e-60 243.0
31 TraesCS6B01G101800 chrUn 78.908 403 43 19 579 952 371098300 371098689 1.100000e-57 235.0
32 TraesCS6B01G101800 chrUn 82.517 286 24 13 1465 1731 268239923 268240201 1.840000e-55 228.0
33 TraesCS6B01G101800 chrUn 82.517 286 24 13 1465 1731 312453988 312453710 1.840000e-55 228.0
34 TraesCS6B01G101800 chrUn 83.271 269 21 12 1465 1716 68356412 68356673 6.610000e-55 226.0
35 TraesCS6B01G101800 chr6A 94.867 4072 162 27 1177 5239 46700650 46696617 0.000000e+00 6318.0
36 TraesCS6B01G101800 chr6A 85.127 3187 343 67 2275 5403 31753543 31750430 0.000000e+00 3138.0
37 TraesCS6B01G101800 chr6A 86.284 2683 275 45 2561 5192 32741298 32743938 0.000000e+00 2830.0
38 TraesCS6B01G101800 chr6A 87.357 2278 233 32 3019 5277 32812175 32809934 0.000000e+00 2560.0
39 TraesCS6B01G101800 chr6A 91.101 854 67 6 2948 3800 45354263 45355108 0.000000e+00 1147.0
40 TraesCS6B01G101800 chr6A 92.551 792 30 7 5159 5950 46696617 46695855 0.000000e+00 1109.0
41 TraesCS6B01G101800 chr6A 88.995 836 61 21 5165 5991 32883461 32882648 0.000000e+00 1005.0
42 TraesCS6B01G101800 chr6A 87.856 527 36 12 494 1002 46701173 46700657 1.570000e-165 593.0
43 TraesCS6B01G101800 chr6A 83.680 625 49 14 1463 2063 32740317 32740912 2.080000e-149 540.0
44 TraesCS6B01G101800 chr6A 90.116 344 25 2 6063 6406 46695241 46694907 7.790000e-119 438.0
45 TraesCS6B01G101800 chr6A 80.868 507 57 19 1462 1952 31754219 31753737 4.830000e-96 363.0
46 TraesCS6B01G101800 chr6A 80.376 479 47 12 6068 6544 32809510 32809077 2.950000e-83 320.0
47 TraesCS6B01G101800 chr6A 84.431 334 29 10 6214 6546 32882551 32882240 2.290000e-79 307.0
48 TraesCS6B01G101800 chr6A 80.670 388 66 5 624 1003 32887896 32887510 6.420000e-75 292.0
49 TraesCS6B01G101800 chr6A 90.222 225 18 1 1656 1876 45353532 45353756 2.310000e-74 291.0
50 TraesCS6B01G101800 chr6A 76.471 595 103 25 583 1175 32739303 32739862 8.310000e-74 289.0
51 TraesCS6B01G101800 chr6A 80.000 420 60 10 78 480 77720274 77720686 8.310000e-74 289.0
52 TraesCS6B01G101800 chr6A 87.892 223 16 7 2128 2343 32740930 32741148 1.090000e-62 252.0
53 TraesCS6B01G101800 chr6A 76.585 410 63 19 583 972 32814326 32813930 1.860000e-45 195.0
54 TraesCS6B01G101800 chr2D 84.606 3365 351 95 2976 6270 48565445 48568712 0.000000e+00 3190.0
55 TraesCS6B01G101800 chr2D 85.839 685 57 10 1462 2114 48563126 48563802 0.000000e+00 691.0
56 TraesCS6B01G101800 chr2D 77.338 834 105 42 604 1388 48562285 48563083 3.650000e-112 416.0
57 TraesCS6B01G101800 chr2D 97.222 36 1 0 6030 6065 543186062 543186027 1.970000e-05 62.1
58 TraesCS6B01G101800 chr6D 86.373 2928 300 56 2460 5340 31269924 31267049 0.000000e+00 3105.0
59 TraesCS6B01G101800 chr6D 85.183 3010 314 61 2275 5220 31471541 31474482 0.000000e+00 2966.0
60 TraesCS6B01G101800 chr6D 86.387 2718 269 38 2561 5229 30097796 30095131 0.000000e+00 2876.0
61 TraesCS6B01G101800 chr6D 86.322 2281 236 37 3019 5277 29925581 29927807 0.000000e+00 2414.0
62 TraesCS6B01G101800 chr6D 88.836 833 64 15 5165 5991 29853491 29854300 0.000000e+00 996.0
63 TraesCS6B01G101800 chr6D 82.594 879 80 31 1262 2114 31270884 31270053 0.000000e+00 708.0
64 TraesCS6B01G101800 chr6D 83.186 678 50 18 1463 2114 30098811 30098172 4.430000e-156 562.0
65 TraesCS6B01G101800 chr6D 90.750 400 30 4 2132 2530 30098187 30097794 1.620000e-145 527.0
66 TraesCS6B01G101800 chr6D 85.743 491 59 9 2396 2881 29924716 29925200 5.860000e-140 508.0
67 TraesCS6B01G101800 chr6D 80.694 663 51 21 1483 2114 31470833 31471449 1.680000e-120 444.0
68 TraesCS6B01G101800 chr6D 82.506 423 50 14 79 482 62884284 62884701 3.760000e-92 350.0
69 TraesCS6B01G101800 chr6D 80.457 481 48 13 6068 6546 29928227 29928663 6.330000e-85 326.0
70 TraesCS6B01G101800 chr6D 83.871 341 26 11 6214 6547 29854398 29854716 1.380000e-76 298.0
71 TraesCS6B01G101800 chr6D 78.876 445 77 13 579 1014 29848989 29849425 1.070000e-72 285.0
72 TraesCS6B01G101800 chr6D 87.629 194 16 4 1195 1388 30099022 30098837 1.110000e-52 219.0
73 TraesCS6B01G101800 chr6D 91.667 72 6 0 2175 2246 31270040 31269969 4.180000e-17 100.0
74 TraesCS6B01G101800 chr6D 88.235 51 1 1 5353 5403 31267017 31266972 1.000000e-03 56.5
75 TraesCS6B01G101800 chr5A 80.535 1197 135 55 579 1716 655639679 655640836 0.000000e+00 830.0
76 TraesCS6B01G101800 chr5A 78.802 835 104 27 916 1715 655641973 655642769 1.640000e-135 494.0
77 TraesCS6B01G101800 chr5A 84.407 295 25 9 1439 1716 655872843 655873133 3.010000e-68 270.0
78 TraesCS6B01G101800 chr5B 79.949 1187 129 56 579 1716 664801319 664802445 0.000000e+00 773.0
79 TraesCS6B01G101800 chr5B 79.397 1194 136 56 579 1716 664892425 664893564 0.000000e+00 741.0
80 TraesCS6B01G101800 chr5B 90.487 452 29 4 5540 5991 346850626 346851063 9.460000e-163 584.0
81 TraesCS6B01G101800 chr5B 81.317 744 96 27 2157 2881 660814400 660813681 1.230000e-156 564.0
82 TraesCS6B01G101800 chr5B 85.965 228 19 3 1493 1712 664802480 664802702 1.420000e-56 231.0
83 TraesCS6B01G101800 chr5B 97.222 36 1 0 6030 6065 405764855 405764820 1.970000e-05 62.1
84 TraesCS6B01G101800 chr4B 90.135 446 30 4 5546 5991 585761122 585760691 9.530000e-158 568.0
85 TraesCS6B01G101800 chr4B 74.937 395 60 20 94 472 270846163 270846534 1.900000e-30 145.0
86 TraesCS6B01G101800 chr2B 86.696 451 36 7 1439 1866 13182933 13183382 4.590000e-131 479.0
87 TraesCS6B01G101800 chr2B 91.489 47 3 1 6030 6075 408191266 408191312 5.480000e-06 63.9
88 TraesCS6B01G101800 chr3A 84.989 473 40 15 5546 5991 176234952 176234484 1.000000e-122 451.0
89 TraesCS6B01G101800 chr3A 84.134 479 45 15 5540 5991 413470468 413470942 1.010000e-117 435.0
90 TraesCS6B01G101800 chr3A 97.222 36 1 0 6030 6065 695909718 695909683 1.970000e-05 62.1
91 TraesCS6B01G101800 chr1A 84.551 479 43 16 5540 5991 198036089 198036563 4.660000e-121 446.0
92 TraesCS6B01G101800 chr1A 84.551 479 43 16 5540 5991 198058012 198058486 4.660000e-121 446.0
93 TraesCS6B01G101800 chr1A 80.198 404 59 12 83 472 548667993 548667597 3.860000e-72 283.0
94 TraesCS6B01G101800 chr1A 97.222 36 1 0 6030 6065 373311983 373311948 1.970000e-05 62.1
95 TraesCS6B01G101800 chr1A 97.222 36 1 0 6030 6065 583588278 583588243 1.970000e-05 62.1
96 TraesCS6B01G101800 chr7A 81.710 421 53 12 79 484 198475787 198476198 4.890000e-86 329.0
97 TraesCS6B01G101800 chr7A 80.096 417 62 14 79 478 167526517 167526105 2.310000e-74 291.0
98 TraesCS6B01G101800 chr5D 81.163 430 59 11 83 496 543832901 543833324 6.330000e-85 326.0
99 TraesCS6B01G101800 chr1D 81.203 399 56 9 83 465 468745231 468745626 2.970000e-78 303.0
100 TraesCS6B01G101800 chr3D 80.238 420 62 18 79 480 14238094 14238510 4.960000e-76 296.0
101 TraesCS6B01G101800 chr3D 97.727 44 1 0 394 437 307566929 307566972 7.040000e-10 76.8
102 TraesCS6B01G101800 chr1B 80.285 421 60 12 79 480 61964863 61965279 4.960000e-76 296.0
103 TraesCS6B01G101800 chr7D 80.097 412 62 11 79 472 568232696 568233105 8.310000e-74 289.0
104 TraesCS6B01G101800 chr3B 75.839 298 50 9 198 478 571810813 571810521 1.480000e-26 132.0
105 TraesCS6B01G101800 chr3B 84.810 79 12 0 394 472 413994101 413994023 5.440000e-11 80.5
106 TraesCS6B01G101800 chr4A 97.222 36 1 0 6030 6065 609823477 609823442 1.970000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G101800 chr6B 79874900 79881446 6546 False 12091.000000 12091 100.000000 1 6547 1 chr6B.!!$F1 6546
1 TraesCS6B01G101800 chr6B 56394875 56397767 2892 True 1565.500000 1810 86.372000 2275 5173 2 chr6B.!!$R5 2898
2 TraesCS6B01G101800 chr6B 56376503 56380283 3780 True 1192.333333 2019 84.855333 1523 5318 3 chr6B.!!$R4 3795
3 TraesCS6B01G101800 chr6B 57730613 57733690 3077 True 1007.000000 2423 84.000333 3019 6547 3 chr6B.!!$R6 3528
4 TraesCS6B01G101800 chr6B 57416030 57420294 4264 False 937.000000 2832 86.234750 1195 5819 4 chr6B.!!$F4 4624
5 TraesCS6B01G101800 chr6B 50408733 50410295 1562 True 715.000000 1158 90.146500 1656 3805 2 chr6B.!!$R3 2149
6 TraesCS6B01G101800 chrUn 27471256 27477653 6397 False 1736.400000 6811 90.763600 494 6547 5 chrUn.!!$F3 6053
7 TraesCS6B01G101800 chrUn 137912547 137914128 1581 True 674.666667 1157 89.339000 1656 3800 3 chrUn.!!$R1 2144
8 TraesCS6B01G101800 chrUn 312453710 312455256 1546 True 419.000000 610 81.687500 579 1731 2 chrUn.!!$R2 1152
9 TraesCS6B01G101800 chrUn 268238655 268240201 1546 False 413.500000 599 81.571500 579 1731 2 chrUn.!!$F5 1152
10 TraesCS6B01G101800 chrUn 68355464 68356673 1209 False 395.000000 564 81.647000 885 1716 2 chrUn.!!$F4 831
11 TraesCS6B01G101800 chr6A 46694907 46701173 6266 True 2114.500000 6318 91.347500 494 6406 4 chr6A.!!$R5 5912
12 TraesCS6B01G101800 chr6A 31750430 31754219 3789 True 1750.500000 3138 82.997500 1462 5403 2 chr6A.!!$R2 3941
13 TraesCS6B01G101800 chr6A 32809077 32814326 5249 True 1025.000000 2560 81.439333 583 6544 3 chr6A.!!$R3 5961
14 TraesCS6B01G101800 chr6A 32739303 32743938 4635 False 977.750000 2830 83.581750 583 5192 4 chr6A.!!$F2 4609
15 TraesCS6B01G101800 chr6A 45353532 45355108 1576 False 719.000000 1147 90.661500 1656 3800 2 chr6A.!!$F3 2144
16 TraesCS6B01G101800 chr6A 32882240 32883461 1221 True 656.000000 1005 86.713000 5165 6546 2 chr6A.!!$R4 1381
17 TraesCS6B01G101800 chr2D 48562285 48568712 6427 False 1432.333333 3190 82.594333 604 6270 3 chr2D.!!$F1 5666
18 TraesCS6B01G101800 chr6D 31470833 31474482 3649 False 1705.000000 2966 82.938500 1483 5220 2 chr6D.!!$F5 3737
19 TraesCS6B01G101800 chr6D 29924716 29928663 3947 False 1082.666667 2414 84.174000 2396 6546 3 chr6D.!!$F4 4150
20 TraesCS6B01G101800 chr6D 30095131 30099022 3891 True 1046.000000 2876 86.988000 1195 5229 4 chr6D.!!$R1 4034
21 TraesCS6B01G101800 chr6D 31266972 31270884 3912 True 992.375000 3105 87.217250 1262 5403 4 chr6D.!!$R2 4141
22 TraesCS6B01G101800 chr6D 29853491 29854716 1225 False 647.000000 996 86.353500 5165 6547 2 chr6D.!!$F3 1382
23 TraesCS6B01G101800 chr5A 655639679 655642769 3090 False 662.000000 830 79.668500 579 1716 2 chr5A.!!$F2 1137
24 TraesCS6B01G101800 chr5B 664892425 664893564 1139 False 741.000000 741 79.397000 579 1716 1 chr5B.!!$F2 1137
25 TraesCS6B01G101800 chr5B 660813681 660814400 719 True 564.000000 564 81.317000 2157 2881 1 chr5B.!!$R2 724
26 TraesCS6B01G101800 chr5B 664801319 664802702 1383 False 502.000000 773 82.957000 579 1716 2 chr5B.!!$F3 1137

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
401 402 0.030101 CCACAACAATGCGTTCGGTT 59.970 50.000 0.00 0.0 34.86 4.44 F
413 414 0.036306 GTTCGGTTGTCCATGGACCT 59.964 55.000 36.27 0.0 43.97 3.85 F
1777 4812 0.042708 CGCAAGAAATCTCGATGCCG 60.043 55.000 0.00 0.0 36.49 5.69 F
1858 4928 2.280628 GCTCGGGATTACTTGACTTGG 58.719 52.381 0.00 0.0 0.00 3.61 F
3595 8504 1.808411 TGACGAGGCAAACCATCTTC 58.192 50.000 0.00 0.0 39.06 2.87 F
4244 9206 1.275291 TCACCTCACCATTCTCGTTCC 59.725 52.381 0.00 0.0 0.00 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1758 4793 0.042708 CGGCATCGAGATTTCTTGCG 60.043 55.000 0.00 0.0 39.00 4.85 R
1898 4968 1.251251 CCAGTTTCAGCCTTTCAGGG 58.749 55.000 0.00 0.0 35.37 4.45 R
3575 8484 2.290260 TGAAGATGGTTTGCCTCGTCAT 60.290 45.455 0.00 0.0 31.46 3.06 R
3836 8757 1.673329 GCTCCGGGAAAACTCAGAGTC 60.673 57.143 2.72 0.0 0.00 3.36 R
5263 10497 1.254026 TCCGACGGAATCTGTTGACT 58.746 50.000 15.79 0.0 0.00 3.41 R
5643 11109 0.167470 CCATCAGCAGCAGAACAACG 59.833 55.000 0.00 0.0 0.00 4.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.164620 TGCATGTTGAGAGAAATAGGTCA 57.835 39.130 0.00 0.00 0.00 4.02
23 24 5.559770 TGCATGTTGAGAGAAATAGGTCAA 58.440 37.500 0.00 0.00 0.00 3.18
24 25 6.182627 TGCATGTTGAGAGAAATAGGTCAAT 58.817 36.000 0.00 0.00 31.84 2.57
25 26 7.337938 TGCATGTTGAGAGAAATAGGTCAATA 58.662 34.615 0.00 0.00 31.84 1.90
26 27 7.828717 TGCATGTTGAGAGAAATAGGTCAATAA 59.171 33.333 0.00 0.00 31.84 1.40
27 28 8.677300 GCATGTTGAGAGAAATAGGTCAATAAA 58.323 33.333 0.00 0.00 31.84 1.40
88 89 8.522178 AAAGAGTAGACACAACTTATTCTTCG 57.478 34.615 0.00 0.00 0.00 3.79
89 90 7.450124 AGAGTAGACACAACTTATTCTTCGA 57.550 36.000 0.00 0.00 0.00 3.71
90 91 7.531716 AGAGTAGACACAACTTATTCTTCGAG 58.468 38.462 0.00 0.00 0.00 4.04
91 92 7.175293 AGAGTAGACACAACTTATTCTTCGAGT 59.825 37.037 0.00 0.00 0.00 4.18
92 93 7.306953 AGTAGACACAACTTATTCTTCGAGTC 58.693 38.462 0.00 0.00 0.00 3.36
93 94 6.085555 AGACACAACTTATTCTTCGAGTCA 57.914 37.500 0.00 0.00 0.00 3.41
94 95 6.153067 AGACACAACTTATTCTTCGAGTCAG 58.847 40.000 0.00 0.00 0.00 3.51
95 96 5.844004 ACACAACTTATTCTTCGAGTCAGT 58.156 37.500 0.00 0.00 0.00 3.41
96 97 5.921408 ACACAACTTATTCTTCGAGTCAGTC 59.079 40.000 0.00 0.00 0.00 3.51
97 98 6.153067 CACAACTTATTCTTCGAGTCAGTCT 58.847 40.000 0.00 0.00 0.00 3.24
98 99 6.642950 CACAACTTATTCTTCGAGTCAGTCTT 59.357 38.462 0.00 0.00 0.00 3.01
99 100 7.169982 CACAACTTATTCTTCGAGTCAGTCTTT 59.830 37.037 0.00 0.00 0.00 2.52
100 101 7.382759 ACAACTTATTCTTCGAGTCAGTCTTTC 59.617 37.037 0.00 0.00 0.00 2.62
101 102 6.087522 ACTTATTCTTCGAGTCAGTCTTTCG 58.912 40.000 0.00 0.00 35.76 3.46
102 103 2.991434 TCTTCGAGTCAGTCTTTCGG 57.009 50.000 0.00 0.00 35.21 4.30
103 104 1.540267 TCTTCGAGTCAGTCTTTCGGG 59.460 52.381 0.00 0.00 35.21 5.14
104 105 0.038526 TTCGAGTCAGTCTTTCGGGC 60.039 55.000 0.00 0.00 35.21 6.13
105 106 0.894184 TCGAGTCAGTCTTTCGGGCT 60.894 55.000 0.00 0.00 35.21 5.19
106 107 0.456995 CGAGTCAGTCTTTCGGGCTC 60.457 60.000 0.00 0.00 39.07 4.70
107 108 0.456995 GAGTCAGTCTTTCGGGCTCG 60.457 60.000 0.00 0.00 33.89 5.03
108 109 1.446272 GTCAGTCTTTCGGGCTCGG 60.446 63.158 5.94 0.00 36.95 4.63
109 110 1.605451 TCAGTCTTTCGGGCTCGGA 60.605 57.895 5.94 0.00 36.95 4.55
110 111 0.970937 TCAGTCTTTCGGGCTCGGAT 60.971 55.000 5.94 0.00 36.95 4.18
111 112 0.528684 CAGTCTTTCGGGCTCGGATC 60.529 60.000 5.94 0.00 36.95 3.36
112 113 1.227292 GTCTTTCGGGCTCGGATCC 60.227 63.158 5.94 0.00 36.95 3.36
113 114 1.381327 TCTTTCGGGCTCGGATCCT 60.381 57.895 5.94 0.00 36.95 3.24
114 115 1.068250 CTTTCGGGCTCGGATCCTC 59.932 63.158 5.94 0.00 36.95 3.71
115 116 2.370647 CTTTCGGGCTCGGATCCTCC 62.371 65.000 5.94 8.04 36.95 4.30
116 117 2.873557 TTTCGGGCTCGGATCCTCCT 62.874 60.000 5.94 0.00 33.30 3.69
117 118 3.299190 CGGGCTCGGATCCTCCTC 61.299 72.222 10.75 0.00 33.30 3.71
118 119 2.123251 GGGCTCGGATCCTCCTCA 60.123 66.667 10.75 0.00 33.30 3.86
119 120 1.762460 GGGCTCGGATCCTCCTCAA 60.762 63.158 10.75 0.00 33.30 3.02
120 121 1.745264 GGCTCGGATCCTCCTCAAG 59.255 63.158 10.75 0.00 33.30 3.02
121 122 1.045911 GGCTCGGATCCTCCTCAAGT 61.046 60.000 10.75 0.00 33.30 3.16
122 123 0.827368 GCTCGGATCCTCCTCAAGTT 59.173 55.000 10.75 0.00 33.30 2.66
123 124 1.208293 GCTCGGATCCTCCTCAAGTTT 59.792 52.381 10.75 0.00 33.30 2.66
124 125 2.898705 CTCGGATCCTCCTCAAGTTTG 58.101 52.381 10.75 0.00 33.30 2.93
125 126 2.234908 CTCGGATCCTCCTCAAGTTTGT 59.765 50.000 10.75 0.00 33.30 2.83
126 127 2.637872 TCGGATCCTCCTCAAGTTTGTT 59.362 45.455 10.75 0.00 33.30 2.83
127 128 3.003480 CGGATCCTCCTCAAGTTTGTTC 58.997 50.000 10.75 0.00 33.30 3.18
128 129 3.003480 GGATCCTCCTCAAGTTTGTTCG 58.997 50.000 3.84 0.00 32.53 3.95
129 130 3.557264 GGATCCTCCTCAAGTTTGTTCGT 60.557 47.826 3.84 0.00 32.53 3.85
130 131 4.322499 GGATCCTCCTCAAGTTTGTTCGTA 60.322 45.833 3.84 0.00 32.53 3.43
131 132 4.252971 TCCTCCTCAAGTTTGTTCGTAG 57.747 45.455 0.00 0.00 0.00 3.51
132 133 3.006537 TCCTCCTCAAGTTTGTTCGTAGG 59.993 47.826 0.00 0.00 0.00 3.18
133 134 3.326747 CTCCTCAAGTTTGTTCGTAGGG 58.673 50.000 0.00 0.00 0.00 3.53
134 135 2.967201 TCCTCAAGTTTGTTCGTAGGGA 59.033 45.455 0.00 0.00 0.00 4.20
135 136 3.064931 CCTCAAGTTTGTTCGTAGGGAC 58.935 50.000 0.00 0.00 0.00 4.46
145 146 3.465990 CGTAGGGACGGACTAGACA 57.534 57.895 0.00 0.00 45.63 3.41
146 147 1.297664 CGTAGGGACGGACTAGACAG 58.702 60.000 0.00 0.00 45.63 3.51
147 148 1.134580 CGTAGGGACGGACTAGACAGA 60.135 57.143 0.00 0.00 45.63 3.41
148 149 2.563702 GTAGGGACGGACTAGACAGAG 58.436 57.143 0.00 0.00 0.00 3.35
149 150 0.394625 AGGGACGGACTAGACAGAGC 60.395 60.000 0.00 0.00 0.00 4.09
150 151 0.394625 GGGACGGACTAGACAGAGCT 60.395 60.000 0.00 0.00 0.00 4.09
151 152 1.018910 GGACGGACTAGACAGAGCTC 58.981 60.000 5.27 5.27 0.00 4.09
152 153 1.018910 GACGGACTAGACAGAGCTCC 58.981 60.000 10.93 0.00 0.00 4.70
153 154 0.745128 ACGGACTAGACAGAGCTCCG 60.745 60.000 10.93 12.64 41.68 4.63
154 155 1.440938 CGGACTAGACAGAGCTCCGG 61.441 65.000 10.93 5.71 36.92 5.14
155 156 1.730451 GGACTAGACAGAGCTCCGGC 61.730 65.000 10.93 1.06 39.06 6.13
156 157 2.054140 GACTAGACAGAGCTCCGGCG 62.054 65.000 10.93 0.00 44.37 6.46
157 158 2.045242 TAGACAGAGCTCCGGCGT 60.045 61.111 10.93 2.46 44.37 5.68
158 159 0.814410 CTAGACAGAGCTCCGGCGTA 60.814 60.000 10.93 0.00 44.37 4.42
159 160 0.814410 TAGACAGAGCTCCGGCGTAG 60.814 60.000 10.93 0.00 44.37 3.51
160 161 2.045242 ACAGAGCTCCGGCGTAGA 60.045 61.111 10.93 0.00 44.37 2.59
161 162 1.448922 GACAGAGCTCCGGCGTAGAT 61.449 60.000 10.93 0.00 44.37 1.98
162 163 1.038130 ACAGAGCTCCGGCGTAGATT 61.038 55.000 10.93 0.00 44.37 2.40
163 164 0.103208 CAGAGCTCCGGCGTAGATTT 59.897 55.000 10.93 0.00 44.37 2.17
164 165 0.386113 AGAGCTCCGGCGTAGATTTC 59.614 55.000 10.93 0.00 44.37 2.17
165 166 0.386113 GAGCTCCGGCGTAGATTTCT 59.614 55.000 2.79 0.00 44.37 2.52
166 167 0.103208 AGCTCCGGCGTAGATTTCTG 59.897 55.000 2.79 0.00 44.37 3.02
167 168 1.491505 GCTCCGGCGTAGATTTCTGC 61.492 60.000 2.79 0.00 0.00 4.26
168 169 0.876342 CTCCGGCGTAGATTTCTGCC 60.876 60.000 6.01 0.02 44.09 4.85
171 172 2.017752 GGCGTAGATTTCTGCCAGC 58.982 57.895 4.51 0.00 46.76 4.85
172 173 0.462759 GGCGTAGATTTCTGCCAGCT 60.463 55.000 4.51 0.00 46.76 4.24
173 174 0.933796 GCGTAGATTTCTGCCAGCTC 59.066 55.000 0.00 0.00 0.00 4.09
174 175 1.576356 CGTAGATTTCTGCCAGCTCC 58.424 55.000 0.00 0.00 0.00 4.70
175 176 1.137872 CGTAGATTTCTGCCAGCTCCT 59.862 52.381 0.00 0.00 0.00 3.69
176 177 2.801342 CGTAGATTTCTGCCAGCTCCTC 60.801 54.545 0.00 0.00 0.00 3.71
177 178 0.177604 AGATTTCTGCCAGCTCCTCG 59.822 55.000 0.00 0.00 0.00 4.63
178 179 0.813210 GATTTCTGCCAGCTCCTCGG 60.813 60.000 0.00 0.00 0.00 4.63
179 180 1.267574 ATTTCTGCCAGCTCCTCGGA 61.268 55.000 0.00 0.00 0.00 4.55
180 181 1.892819 TTTCTGCCAGCTCCTCGGAG 61.893 60.000 8.62 8.62 44.56 4.63
209 210 2.741211 GGGGGTTTCTCGTCGTGC 60.741 66.667 0.00 0.00 0.00 5.34
210 211 2.029964 GGGGTTTCTCGTCGTGCA 59.970 61.111 0.00 0.00 0.00 4.57
211 212 1.375523 GGGGTTTCTCGTCGTGCAT 60.376 57.895 0.00 0.00 0.00 3.96
212 213 0.108520 GGGGTTTCTCGTCGTGCATA 60.109 55.000 0.00 0.00 0.00 3.14
213 214 0.997196 GGGTTTCTCGTCGTGCATAC 59.003 55.000 0.00 0.00 0.00 2.39
214 215 1.670674 GGGTTTCTCGTCGTGCATACA 60.671 52.381 0.00 0.00 0.00 2.29
215 216 1.389106 GGTTTCTCGTCGTGCATACAC 59.611 52.381 0.00 0.00 43.76 2.90
227 228 4.864916 GTGCATACACAATGACGAGATT 57.135 40.909 0.00 0.00 46.61 2.40
228 229 5.221891 GTGCATACACAATGACGAGATTT 57.778 39.130 0.00 0.00 46.61 2.17
229 230 5.023920 GTGCATACACAATGACGAGATTTG 58.976 41.667 0.00 0.00 46.61 2.32
230 231 4.094739 TGCATACACAATGACGAGATTTGG 59.905 41.667 0.00 0.00 37.86 3.28
231 232 4.094887 GCATACACAATGACGAGATTTGGT 59.905 41.667 0.00 0.00 37.86 3.67
232 233 5.562917 CATACACAATGACGAGATTTGGTG 58.437 41.667 0.00 0.00 37.86 4.17
233 234 3.476552 ACACAATGACGAGATTTGGTGT 58.523 40.909 0.00 0.00 0.00 4.16
234 235 3.498397 ACACAATGACGAGATTTGGTGTC 59.502 43.478 0.00 0.00 0.00 3.67
235 236 3.498018 CACAATGACGAGATTTGGTGTCA 59.502 43.478 0.00 0.00 44.58 3.58
236 237 3.748048 ACAATGACGAGATTTGGTGTCAG 59.252 43.478 0.00 0.00 43.80 3.51
237 238 3.961480 ATGACGAGATTTGGTGTCAGA 57.039 42.857 0.00 0.00 43.80 3.27
238 239 3.961480 TGACGAGATTTGGTGTCAGAT 57.039 42.857 0.00 0.00 36.50 2.90
239 240 4.271696 TGACGAGATTTGGTGTCAGATT 57.728 40.909 0.00 0.00 36.50 2.40
240 241 4.245660 TGACGAGATTTGGTGTCAGATTC 58.754 43.478 0.00 0.00 36.50 2.52
241 242 4.021104 TGACGAGATTTGGTGTCAGATTCT 60.021 41.667 0.00 0.00 36.50 2.40
242 243 4.899502 ACGAGATTTGGTGTCAGATTCTT 58.100 39.130 0.00 0.00 0.00 2.52
243 244 4.932200 ACGAGATTTGGTGTCAGATTCTTC 59.068 41.667 0.00 0.00 0.00 2.87
244 245 4.931601 CGAGATTTGGTGTCAGATTCTTCA 59.068 41.667 0.00 0.00 0.00 3.02
245 246 5.583854 CGAGATTTGGTGTCAGATTCTTCAT 59.416 40.000 0.00 0.00 0.00 2.57
246 247 6.758416 CGAGATTTGGTGTCAGATTCTTCATA 59.242 38.462 0.00 0.00 0.00 2.15
247 248 7.440556 CGAGATTTGGTGTCAGATTCTTCATAT 59.559 37.037 0.00 0.00 0.00 1.78
248 249 9.118300 GAGATTTGGTGTCAGATTCTTCATATT 57.882 33.333 0.00 0.00 0.00 1.28
249 250 8.900781 AGATTTGGTGTCAGATTCTTCATATTG 58.099 33.333 0.00 0.00 0.00 1.90
250 251 8.812513 ATTTGGTGTCAGATTCTTCATATTGA 57.187 30.769 0.00 0.00 0.00 2.57
251 252 8.812513 TTTGGTGTCAGATTCTTCATATTGAT 57.187 30.769 0.00 0.00 0.00 2.57
252 253 8.812513 TTGGTGTCAGATTCTTCATATTGATT 57.187 30.769 0.00 0.00 0.00 2.57
253 254 8.442632 TGGTGTCAGATTCTTCATATTGATTC 57.557 34.615 0.00 0.00 0.00 2.52
254 255 8.048514 TGGTGTCAGATTCTTCATATTGATTCA 58.951 33.333 0.00 0.00 0.00 2.57
255 256 9.064706 GGTGTCAGATTCTTCATATTGATTCAT 57.935 33.333 0.00 0.00 0.00 2.57
272 273 8.865590 TTGATTCATAGATTTAATGACGACGA 57.134 30.769 0.00 0.00 33.18 4.20
273 274 8.282124 TGATTCATAGATTTAATGACGACGAC 57.718 34.615 0.00 0.00 33.18 4.34
274 275 8.135529 TGATTCATAGATTTAATGACGACGACT 58.864 33.333 0.00 0.00 33.18 4.18
275 276 7.679659 TTCATAGATTTAATGACGACGACTG 57.320 36.000 0.00 0.00 33.18 3.51
276 277 5.685954 TCATAGATTTAATGACGACGACTGC 59.314 40.000 0.00 0.00 0.00 4.40
277 278 2.852413 AGATTTAATGACGACGACTGCG 59.148 45.455 0.00 0.00 44.79 5.18
278 279 1.342555 TTTAATGACGACGACTGCGG 58.657 50.000 0.00 0.00 43.17 5.69
279 280 1.074319 TTAATGACGACGACTGCGGC 61.074 55.000 0.00 0.00 43.80 6.53
280 281 1.929806 TAATGACGACGACTGCGGCT 61.930 55.000 0.00 0.00 45.51 5.52
281 282 3.685214 ATGACGACGACTGCGGCTC 62.685 63.158 0.00 0.00 45.51 4.70
296 297 3.691342 CTCCCGAACGCTGGTCCA 61.691 66.667 0.00 0.00 0.00 4.02
297 298 3.000819 TCCCGAACGCTGGTCCAT 61.001 61.111 0.00 0.00 0.00 3.41
298 299 1.672854 CTCCCGAACGCTGGTCCATA 61.673 60.000 0.00 0.00 0.00 2.74
299 300 1.227263 CCCGAACGCTGGTCCATAG 60.227 63.158 0.00 0.00 0.00 2.23
300 301 1.227263 CCGAACGCTGGTCCATAGG 60.227 63.158 0.00 0.00 0.00 2.57
301 302 1.227263 CGAACGCTGGTCCATAGGG 60.227 63.158 0.00 0.00 0.00 3.53
302 303 1.146263 GAACGCTGGTCCATAGGGG 59.854 63.158 0.00 0.00 38.37 4.79
303 304 2.942648 GAACGCTGGTCCATAGGGGC 62.943 65.000 0.00 0.00 38.40 5.80
304 305 3.479203 CGCTGGTCCATAGGGGCA 61.479 66.667 0.00 0.00 42.08 5.36
305 306 2.193248 GCTGGTCCATAGGGGCAC 59.807 66.667 0.00 0.00 42.08 5.01
306 307 2.505982 CTGGTCCATAGGGGCACG 59.494 66.667 0.00 0.00 42.08 5.34
307 308 2.285069 TGGTCCATAGGGGCACGT 60.285 61.111 0.00 0.00 42.08 4.49
308 309 2.189521 GGTCCATAGGGGCACGTG 59.810 66.667 12.28 12.28 42.08 4.49
309 310 2.513897 GTCCATAGGGGCACGTGC 60.514 66.667 32.15 32.15 39.19 5.34
310 311 3.006133 TCCATAGGGGCACGTGCA 61.006 61.111 38.60 21.26 44.36 4.57
311 312 2.824041 CCATAGGGGCACGTGCAC 60.824 66.667 38.60 36.67 45.53 4.57
317 318 3.712881 GGGCACGTGCACGAAGAC 61.713 66.667 42.94 33.69 44.36 3.01
318 319 2.661866 GGCACGTGCACGAAGACT 60.662 61.111 42.94 19.98 44.36 3.24
319 320 2.244651 GGCACGTGCACGAAGACTT 61.245 57.895 42.94 19.18 44.36 3.01
320 321 1.201825 GCACGTGCACGAAGACTTC 59.798 57.895 42.94 19.21 43.02 3.01
321 322 1.853319 CACGTGCACGAAGACTTCC 59.147 57.895 42.94 0.00 43.02 3.46
322 323 1.300697 ACGTGCACGAAGACTTCCC 60.301 57.895 42.94 0.00 43.02 3.97
323 324 1.300620 CGTGCACGAAGACTTCCCA 60.301 57.895 34.93 2.19 43.02 4.37
324 325 1.284982 CGTGCACGAAGACTTCCCAG 61.285 60.000 34.93 0.00 43.02 4.45
325 326 0.249911 GTGCACGAAGACTTCCCAGT 60.250 55.000 9.63 0.00 35.17 4.00
326 327 0.468226 TGCACGAAGACTTCCCAGTT 59.532 50.000 9.63 0.00 31.22 3.16
327 328 1.134220 TGCACGAAGACTTCCCAGTTT 60.134 47.619 9.63 0.00 31.22 2.66
328 329 1.947456 GCACGAAGACTTCCCAGTTTT 59.053 47.619 9.63 0.00 31.22 2.43
329 330 2.031944 GCACGAAGACTTCCCAGTTTTC 60.032 50.000 9.63 0.00 39.66 2.29
333 334 2.150397 AGACTTCCCAGTTTTCGTCG 57.850 50.000 0.00 0.00 31.22 5.12
334 335 1.684983 AGACTTCCCAGTTTTCGTCGA 59.315 47.619 0.00 0.00 31.22 4.20
335 336 1.791204 GACTTCCCAGTTTTCGTCGAC 59.209 52.381 5.18 5.18 31.22 4.20
336 337 1.137479 ACTTCCCAGTTTTCGTCGACA 59.863 47.619 17.16 0.00 0.00 4.35
337 338 2.206750 CTTCCCAGTTTTCGTCGACAA 58.793 47.619 17.16 6.36 0.00 3.18
338 339 1.860676 TCCCAGTTTTCGTCGACAAG 58.139 50.000 17.16 0.00 0.00 3.16
339 340 0.865769 CCCAGTTTTCGTCGACAAGG 59.134 55.000 17.16 5.73 0.00 3.61
340 341 1.578583 CCAGTTTTCGTCGACAAGGT 58.421 50.000 17.16 0.00 0.00 3.50
341 342 1.525619 CCAGTTTTCGTCGACAAGGTC 59.474 52.381 17.16 2.77 0.00 3.85
342 343 2.198406 CAGTTTTCGTCGACAAGGTCA 58.802 47.619 17.16 0.00 32.09 4.02
343 344 2.605818 CAGTTTTCGTCGACAAGGTCAA 59.394 45.455 17.16 0.00 32.09 3.18
344 345 3.062909 CAGTTTTCGTCGACAAGGTCAAA 59.937 43.478 17.16 1.93 32.09 2.69
345 346 3.875134 AGTTTTCGTCGACAAGGTCAAAT 59.125 39.130 17.16 0.00 32.09 2.32
346 347 4.025145 AGTTTTCGTCGACAAGGTCAAATC 60.025 41.667 17.16 3.87 32.09 2.17
347 348 1.693467 TCGTCGACAAGGTCAAATCG 58.307 50.000 17.16 0.00 35.91 3.34
348 349 0.713883 CGTCGACAAGGTCAAATCGG 59.286 55.000 17.16 0.00 35.31 4.18
349 350 0.442699 GTCGACAAGGTCAAATCGGC 59.557 55.000 11.55 0.00 35.31 5.54
350 351 0.320374 TCGACAAGGTCAAATCGGCT 59.680 50.000 0.00 0.00 35.31 5.52
351 352 0.721718 CGACAAGGTCAAATCGGCTC 59.278 55.000 0.00 0.00 32.09 4.70
352 353 1.087501 GACAAGGTCAAATCGGCTCC 58.912 55.000 0.00 0.00 32.09 4.70
353 354 0.693049 ACAAGGTCAAATCGGCTCCT 59.307 50.000 0.00 0.00 0.00 3.69
354 355 1.089920 CAAGGTCAAATCGGCTCCTG 58.910 55.000 0.00 0.00 0.00 3.86
355 356 0.693049 AAGGTCAAATCGGCTCCTGT 59.307 50.000 0.00 0.00 0.00 4.00
356 357 1.568504 AGGTCAAATCGGCTCCTGTA 58.431 50.000 0.00 0.00 0.00 2.74
357 358 2.119495 AGGTCAAATCGGCTCCTGTAT 58.881 47.619 0.00 0.00 0.00 2.29
358 359 2.158900 AGGTCAAATCGGCTCCTGTATG 60.159 50.000 0.00 0.00 0.00 2.39
359 360 2.213499 GTCAAATCGGCTCCTGTATGG 58.787 52.381 0.00 0.00 37.10 2.74
360 361 1.140852 TCAAATCGGCTCCTGTATGGG 59.859 52.381 0.00 0.00 36.20 4.00
361 362 1.140852 CAAATCGGCTCCTGTATGGGA 59.859 52.381 0.00 0.00 36.20 4.37
366 367 2.423446 CTCCTGTATGGGAGCGGC 59.577 66.667 0.00 0.00 45.07 6.53
367 368 3.506059 CTCCTGTATGGGAGCGGCG 62.506 68.421 0.51 0.51 45.07 6.46
368 369 3.536917 CCTGTATGGGAGCGGCGA 61.537 66.667 12.98 0.00 0.00 5.54
369 370 2.279517 CTGTATGGGAGCGGCGAC 60.280 66.667 12.98 3.05 0.00 5.19
381 382 3.027292 GGCGACGGCTTGTTTTGA 58.973 55.556 15.00 0.00 39.81 2.69
382 383 1.370051 GGCGACGGCTTGTTTTGAC 60.370 57.895 15.00 0.00 39.81 3.18
383 384 1.370051 GCGACGGCTTGTTTTGACC 60.370 57.895 0.00 0.00 35.83 4.02
384 385 2.018544 CGACGGCTTGTTTTGACCA 58.981 52.632 0.00 0.00 0.00 4.02
385 386 0.316689 CGACGGCTTGTTTTGACCAC 60.317 55.000 0.00 0.00 0.00 4.16
386 387 0.736053 GACGGCTTGTTTTGACCACA 59.264 50.000 0.00 0.00 0.00 4.17
387 388 1.133407 GACGGCTTGTTTTGACCACAA 59.867 47.619 0.00 0.00 33.09 3.33
388 389 1.135228 ACGGCTTGTTTTGACCACAAC 60.135 47.619 0.00 0.00 35.63 3.32
389 390 1.135257 CGGCTTGTTTTGACCACAACA 60.135 47.619 0.00 0.00 35.63 3.33
390 391 2.672478 CGGCTTGTTTTGACCACAACAA 60.672 45.455 12.20 12.20 35.63 2.83
391 392 3.530535 GGCTTGTTTTGACCACAACAAT 58.469 40.909 12.92 0.00 35.63 2.71
392 393 3.309410 GGCTTGTTTTGACCACAACAATG 59.691 43.478 12.92 9.41 35.63 2.82
393 394 3.242381 GCTTGTTTTGACCACAACAATGC 60.242 43.478 12.92 13.65 35.63 3.56
394 395 2.534298 TGTTTTGACCACAACAATGCG 58.466 42.857 0.00 0.00 35.63 4.73
395 396 2.094494 TGTTTTGACCACAACAATGCGT 60.094 40.909 0.00 0.00 35.63 5.24
396 397 2.926838 GTTTTGACCACAACAATGCGTT 59.073 40.909 0.00 0.00 38.83 4.84
397 398 2.483583 TTGACCACAACAATGCGTTC 57.516 45.000 0.00 0.00 34.86 3.95
398 399 0.306228 TGACCACAACAATGCGTTCG 59.694 50.000 0.00 0.00 34.86 3.95
399 400 0.385473 GACCACAACAATGCGTTCGG 60.385 55.000 0.00 0.00 34.86 4.30
400 401 1.098712 ACCACAACAATGCGTTCGGT 61.099 50.000 0.00 0.00 36.16 4.69
401 402 0.030101 CCACAACAATGCGTTCGGTT 59.970 50.000 0.00 0.00 34.86 4.44
402 403 1.119635 CACAACAATGCGTTCGGTTG 58.880 50.000 16.33 16.33 44.57 3.77
403 404 0.736053 ACAACAATGCGTTCGGTTGT 59.264 45.000 17.36 17.36 46.37 3.32
404 405 1.394697 CAACAATGCGTTCGGTTGTC 58.605 50.000 11.76 0.00 34.86 3.18
405 406 0.309612 AACAATGCGTTCGGTTGTCC 59.690 50.000 0.00 0.00 35.19 4.02
406 407 0.816018 ACAATGCGTTCGGTTGTCCA 60.816 50.000 0.00 0.00 30.78 4.02
407 408 0.521291 CAATGCGTTCGGTTGTCCAT 59.479 50.000 0.00 0.00 0.00 3.41
408 409 0.521291 AATGCGTTCGGTTGTCCATG 59.479 50.000 0.00 0.00 0.00 3.66
409 410 1.305219 ATGCGTTCGGTTGTCCATGG 61.305 55.000 4.97 4.97 0.00 3.66
410 411 1.669760 GCGTTCGGTTGTCCATGGA 60.670 57.895 11.44 11.44 0.00 3.41
411 412 1.908066 GCGTTCGGTTGTCCATGGAC 61.908 60.000 33.97 33.97 44.77 4.02
412 413 1.296056 CGTTCGGTTGTCCATGGACC 61.296 60.000 36.27 23.74 43.97 4.46
413 414 0.036306 GTTCGGTTGTCCATGGACCT 59.964 55.000 36.27 0.00 43.97 3.85
414 415 0.323629 TTCGGTTGTCCATGGACCTC 59.676 55.000 36.27 27.91 43.97 3.85
415 416 1.447838 CGGTTGTCCATGGACCTCG 60.448 63.158 36.27 30.36 43.97 4.63
416 417 1.884075 CGGTTGTCCATGGACCTCGA 61.884 60.000 36.27 19.15 43.97 4.04
417 418 0.541863 GGTTGTCCATGGACCTCGAT 59.458 55.000 36.27 0.00 43.97 3.59
418 419 1.656652 GTTGTCCATGGACCTCGATG 58.343 55.000 36.27 0.00 43.97 3.84
419 420 0.107703 TTGTCCATGGACCTCGATGC 60.108 55.000 36.27 14.29 43.97 3.91
420 421 1.264045 TGTCCATGGACCTCGATGCA 61.264 55.000 36.27 16.70 43.97 3.96
421 422 0.107703 GTCCATGGACCTCGATGCAA 60.108 55.000 31.37 0.00 39.08 4.08
422 423 0.839277 TCCATGGACCTCGATGCAAT 59.161 50.000 11.44 0.00 31.78 3.56
423 424 1.212688 TCCATGGACCTCGATGCAATT 59.787 47.619 11.44 0.00 31.78 2.32
424 425 2.026641 CCATGGACCTCGATGCAATTT 58.973 47.619 5.56 0.00 31.78 1.82
425 426 2.428171 CCATGGACCTCGATGCAATTTT 59.572 45.455 5.56 0.00 31.78 1.82
426 427 3.119029 CCATGGACCTCGATGCAATTTTT 60.119 43.478 5.56 0.00 31.78 1.94
427 428 4.097741 CCATGGACCTCGATGCAATTTTTA 59.902 41.667 5.56 0.00 31.78 1.52
428 429 5.221303 CCATGGACCTCGATGCAATTTTTAT 60.221 40.000 5.56 0.00 31.78 1.40
429 430 5.913137 TGGACCTCGATGCAATTTTTATT 57.087 34.783 0.00 0.00 0.00 1.40
430 431 7.424803 CATGGACCTCGATGCAATTTTTATTA 58.575 34.615 0.00 0.00 0.00 0.98
431 432 7.581213 TGGACCTCGATGCAATTTTTATTAT 57.419 32.000 0.00 0.00 0.00 1.28
432 433 7.424803 TGGACCTCGATGCAATTTTTATTATG 58.575 34.615 0.00 0.00 0.00 1.90
433 434 7.068103 TGGACCTCGATGCAATTTTTATTATGT 59.932 33.333 0.00 0.00 0.00 2.29
434 435 7.920682 GGACCTCGATGCAATTTTTATTATGTT 59.079 33.333 0.00 0.00 0.00 2.71
435 436 9.301153 GACCTCGATGCAATTTTTATTATGTTT 57.699 29.630 0.00 0.00 0.00 2.83
436 437 9.086336 ACCTCGATGCAATTTTTATTATGTTTG 57.914 29.630 0.00 0.00 0.00 2.93
437 438 8.542132 CCTCGATGCAATTTTTATTATGTTTGG 58.458 33.333 0.00 0.00 0.00 3.28
438 439 9.299963 CTCGATGCAATTTTTATTATGTTTGGA 57.700 29.630 0.00 0.00 0.00 3.53
439 440 9.299963 TCGATGCAATTTTTATTATGTTTGGAG 57.700 29.630 0.00 0.00 0.00 3.86
440 441 9.086336 CGATGCAATTTTTATTATGTTTGGAGT 57.914 29.630 0.00 0.00 0.00 3.85
442 443 9.723601 ATGCAATTTTTATTATGTTTGGAGTGT 57.276 25.926 0.00 0.00 0.00 3.55
443 444 9.553064 TGCAATTTTTATTATGTTTGGAGTGTT 57.447 25.926 0.00 0.00 0.00 3.32
453 454 9.744468 ATTATGTTTGGAGTGTTTTGTACTTTC 57.256 29.630 0.00 0.00 0.00 2.62
454 455 6.576662 TGTTTGGAGTGTTTTGTACTTTCA 57.423 33.333 0.00 0.00 0.00 2.69
455 456 6.982852 TGTTTGGAGTGTTTTGTACTTTCAA 58.017 32.000 0.00 0.00 0.00 2.69
456 457 7.607250 TGTTTGGAGTGTTTTGTACTTTCAAT 58.393 30.769 0.00 0.00 0.00 2.57
457 458 7.543868 TGTTTGGAGTGTTTTGTACTTTCAATG 59.456 33.333 0.00 0.00 0.00 2.82
458 459 7.397892 TTGGAGTGTTTTGTACTTTCAATGA 57.602 32.000 0.00 0.00 0.00 2.57
459 460 7.397892 TGGAGTGTTTTGTACTTTCAATGAA 57.602 32.000 0.00 0.00 0.00 2.57
460 461 8.006298 TGGAGTGTTTTGTACTTTCAATGAAT 57.994 30.769 0.00 0.00 0.00 2.57
461 462 8.134895 TGGAGTGTTTTGTACTTTCAATGAATC 58.865 33.333 0.00 0.00 0.00 2.52
462 463 8.352942 GGAGTGTTTTGTACTTTCAATGAATCT 58.647 33.333 0.00 0.00 0.00 2.40
463 464 9.736023 GAGTGTTTTGTACTTTCAATGAATCTT 57.264 29.630 0.00 0.00 0.00 2.40
466 467 9.868277 TGTTTTGTACTTTCAATGAATCTTTGT 57.132 25.926 8.43 0.00 0.00 2.83
510 512 8.553459 TTTTAGAAAAACTCATTGCCACAAAA 57.447 26.923 0.00 0.00 0.00 2.44
511 513 8.729805 TTTAGAAAAACTCATTGCCACAAAAT 57.270 26.923 0.00 0.00 0.00 1.82
512 514 9.823647 TTTAGAAAAACTCATTGCCACAAAATA 57.176 25.926 0.00 0.00 0.00 1.40
514 516 8.907222 AGAAAAACTCATTGCCACAAAATATT 57.093 26.923 0.00 0.00 0.00 1.28
515 517 8.992073 AGAAAAACTCATTGCCACAAAATATTC 58.008 29.630 0.00 0.00 0.00 1.75
517 519 8.674263 AAAACTCATTGCCACAAAATATTCAA 57.326 26.923 0.00 0.00 0.00 2.69
518 520 8.851541 AAACTCATTGCCACAAAATATTCAAT 57.148 26.923 0.00 0.00 0.00 2.57
519 521 8.483307 AACTCATTGCCACAAAATATTCAATC 57.517 30.769 0.00 0.00 0.00 2.67
520 522 7.613585 ACTCATTGCCACAAAATATTCAATCA 58.386 30.769 0.00 0.00 0.00 2.57
521 523 8.262227 ACTCATTGCCACAAAATATTCAATCAT 58.738 29.630 0.00 0.00 0.00 2.45
522 524 8.426881 TCATTGCCACAAAATATTCAATCATG 57.573 30.769 0.00 0.00 0.00 3.07
523 525 7.496263 TCATTGCCACAAAATATTCAATCATGG 59.504 33.333 0.00 0.00 0.00 3.66
524 526 6.541934 TGCCACAAAATATTCAATCATGGA 57.458 33.333 0.00 0.00 0.00 3.41
525 527 6.944096 TGCCACAAAATATTCAATCATGGAA 58.056 32.000 0.00 0.00 0.00 3.53
606 609 4.216472 GCAAAACAGGAACTTCTAAGGGAG 59.784 45.833 0.00 0.00 34.60 4.30
616 619 1.198759 TCTAAGGGAGCAAACCGCCT 61.199 55.000 0.00 0.00 44.04 5.52
692 700 1.528586 CTGCACACGTTTCTTCTCCAG 59.471 52.381 0.00 0.00 0.00 3.86
706 715 4.394712 CCAGGCCCTCGCGAGTTT 62.395 66.667 32.41 13.43 35.02 2.66
720 729 0.313672 GAGTTTGCGGAATTGCCACA 59.686 50.000 0.00 0.00 35.94 4.17
812 856 2.046285 CCAAGAACCGGCCCATGAC 61.046 63.158 0.00 0.00 0.00 3.06
1075 1185 4.426313 GGCCTTCGGAGTTGGGGG 62.426 72.222 0.00 0.00 0.00 5.40
1078 1188 2.269241 CTTCGGAGTTGGGGGAGC 59.731 66.667 0.00 0.00 0.00 4.70
1082 1192 4.097361 GGAGTTGGGGGAGCCGAC 62.097 72.222 0.00 0.00 0.00 4.79
1222 1516 2.747855 CGGCAAGGAGAACAGGCC 60.748 66.667 0.00 0.00 41.20 5.19
1251 1584 1.105759 GCAGGTGATGATTGGCCTCC 61.106 60.000 3.32 0.00 0.00 4.30
1407 1767 1.588861 GGTCTTATTGTTCGCTCGCTC 59.411 52.381 0.00 0.00 0.00 5.03
1452 1855 3.081061 TCTGTTCGGAATGTGGAATTGG 58.919 45.455 0.00 0.00 0.00 3.16
1466 1869 6.202331 TGTGGAATTGGGATCTCTAAGTCTA 58.798 40.000 0.00 0.00 0.00 2.59
1514 2553 9.582431 TGATTTAGTAGTAGAAACGGAATCAAG 57.418 33.333 0.00 0.00 33.83 3.02
1526 3348 6.827586 AACGGAATCAAGTTTAGGCAAATA 57.172 33.333 0.00 0.00 0.00 1.40
1575 3399 8.398665 GCATTTTCCTGATTATTACTCGAGTTT 58.601 33.333 25.44 14.28 0.00 2.66
1625 3457 7.556844 AGAGGTATCTTGTTGTGATTATTCGT 58.443 34.615 0.00 0.00 28.57 3.85
1636 3468 8.065407 TGTTGTGATTATTCGTAACTGTTCAAC 58.935 33.333 0.00 1.74 0.00 3.18
1777 4812 0.042708 CGCAAGAAATCTCGATGCCG 60.043 55.000 0.00 0.00 36.49 5.69
1832 4889 4.375272 GTTATAGGGGAAGTTAAGCCGAC 58.625 47.826 0.00 0.00 0.00 4.79
1858 4928 2.280628 GCTCGGGATTACTTGACTTGG 58.719 52.381 0.00 0.00 0.00 3.61
1898 4968 4.301628 CTTTTGCCTTTGGTCATCTGTTC 58.698 43.478 0.00 0.00 0.00 3.18
1982 5053 6.109359 AGAGTGAAAGGATTTGGATAACTCG 58.891 40.000 0.00 0.00 39.27 4.18
1985 5056 6.540189 AGTGAAAGGATTTGGATAACTCGATG 59.460 38.462 0.00 0.00 39.27 3.84
2226 5299 6.267699 TGAATCTTGTCCACTCTTCTCACTTA 59.732 38.462 0.00 0.00 0.00 2.24
2302 6355 4.286032 TGTGCATAGAAAGTAGAACTGGGT 59.714 41.667 0.00 0.00 0.00 4.51
2391 6469 7.041508 GGCATGAAATCTTGGTTAGAGTGATAG 60.042 40.741 0.00 0.00 36.02 2.08
2392 6470 7.497249 GCATGAAATCTTGGTTAGAGTGATAGT 59.503 37.037 0.00 0.00 36.02 2.12
2557 6640 3.785325 TGTGGGGAAATCATGAGGTCATA 59.215 43.478 0.09 0.00 34.26 2.15
2620 6770 7.831193 AGTTGAATGTATGAGCTTCCTTTGTAT 59.169 33.333 0.00 0.00 0.00 2.29
2624 6774 9.109393 GAATGTATGAGCTTCCTTTGTATACAA 57.891 33.333 14.35 14.35 34.44 2.41
2795 6955 3.454447 TGGAACTGGTTCAGAAGTCTCAA 59.546 43.478 14.25 0.00 41.20 3.02
3138 7635 3.866910 GCCTAATGTCATGCACAAAATGG 59.133 43.478 0.00 4.75 38.97 3.16
3140 7637 5.722263 CCTAATGTCATGCACAAAATGGAA 58.278 37.500 0.00 0.00 38.97 3.53
3141 7638 5.808540 CCTAATGTCATGCACAAAATGGAAG 59.191 40.000 0.00 0.00 38.97 3.46
3142 7639 4.877378 ATGTCATGCACAAAATGGAAGT 57.123 36.364 0.00 0.00 38.97 3.01
3143 7640 3.979948 TGTCATGCACAAAATGGAAGTG 58.020 40.909 0.00 0.00 36.39 3.16
3222 7739 7.824289 CCTGTACAATCAACTATTCAGAAGGAA 59.176 37.037 0.00 0.00 40.46 3.36
3298 8191 4.346127 TCTGATGGGACCTGAATCATACTG 59.654 45.833 5.78 0.00 30.31 2.74
3308 8206 6.644347 ACCTGAATCATACTGTTACTCTTGG 58.356 40.000 0.00 0.00 0.00 3.61
3443 8347 8.100164 ACATGGAAACCCGAAAATTTGAATAAT 58.900 29.630 0.00 0.00 0.00 1.28
3494 8403 9.906660 GATATGTTGTTTCCATGTTTAACTCAA 57.093 29.630 0.00 0.00 0.00 3.02
3575 8484 7.342284 AGTCAGAAGGCACTATAAGCTTACTTA 59.658 37.037 8.70 0.00 39.69 2.24
3595 8504 1.808411 TGACGAGGCAAACCATCTTC 58.192 50.000 0.00 0.00 39.06 2.87
3696 8605 2.093606 CGTCCTCCCCTCTTTTCCTTAC 60.094 54.545 0.00 0.00 0.00 2.34
3836 8757 2.988493 CAACGTGCAAATCTTCAATGGG 59.012 45.455 0.00 0.00 0.00 4.00
3898 8851 5.877564 CCTTCTCCATACTTGGTTCTTTCTC 59.122 44.000 0.00 0.00 44.06 2.87
3955 8916 9.436957 CTATTCAGGTTACATTACACTTCAAGT 57.563 33.333 0.00 0.00 0.00 3.16
4076 9037 7.598493 GGCACAAACTCAAATTTGAAGCTTATA 59.402 33.333 20.82 0.00 41.28 0.98
4244 9206 1.275291 TCACCTCACCATTCTCGTTCC 59.725 52.381 0.00 0.00 0.00 3.62
4305 9284 3.764434 CTCAGGGAGTTGTCTTAGCTGTA 59.236 47.826 0.00 0.00 0.00 2.74
4522 9519 7.611467 TCCATCAAAGTATTGTAACTGAATGCT 59.389 33.333 0.00 0.00 37.79 3.79
4683 9682 8.216453 GCAATTCATGTTTCTGACACATTTTAC 58.784 33.333 6.70 0.00 42.04 2.01
4884 9903 3.432252 CACGACACTCATTTTACCTGACC 59.568 47.826 0.00 0.00 0.00 4.02
5145 10164 1.915078 AAGTCATCGGGCTTCCCAGG 61.915 60.000 2.47 0.00 45.83 4.45
5263 10497 4.259356 CATCCTGCTGATCAGAGTTCAAA 58.741 43.478 27.04 6.16 45.72 2.69
5278 10557 4.451900 AGTTCAAAGTCAACAGATTCCGT 58.548 39.130 0.00 0.00 0.00 4.69
5553 11016 1.774254 TGGACATGTCTCTTTGGTGGT 59.226 47.619 24.50 0.00 0.00 4.16
5643 11109 3.990318 AACAAGGCTGAGTTAAGTTGC 57.010 42.857 4.01 1.92 0.00 4.17
5919 11397 6.291648 TGTGATTCTTTCTATCTCTGCTGT 57.708 37.500 0.00 0.00 0.00 4.40
5952 11430 6.036517 GCTTGTGTCTGAACCTGTATGATAAG 59.963 42.308 0.00 0.00 0.00 1.73
5985 11463 2.981302 GCAATGGCTTGGGGAACC 59.019 61.111 0.00 0.00 44.67 3.62
5986 11464 1.610379 GCAATGGCTTGGGGAACCT 60.610 57.895 0.00 0.00 44.70 3.50
5987 11465 1.891722 GCAATGGCTTGGGGAACCTG 61.892 60.000 0.00 0.00 44.70 4.00
6035 12051 6.503589 TTTGCTTTATATTGCGGTGTACTT 57.496 33.333 0.00 0.00 0.00 2.24
6039 12061 5.050295 GCTTTATATTGCGGTGTACTTCCTC 60.050 44.000 0.00 0.00 0.00 3.71
6045 12067 1.067635 GCGGTGTACTTCCTCCGTAAA 60.068 52.381 0.00 0.00 44.07 2.01
6046 12068 2.872370 CGGTGTACTTCCTCCGTAAAG 58.128 52.381 0.00 0.00 38.45 1.85
6047 12069 2.489329 CGGTGTACTTCCTCCGTAAAGA 59.511 50.000 0.00 0.00 38.45 2.52
6048 12070 3.057315 CGGTGTACTTCCTCCGTAAAGAA 60.057 47.826 0.00 0.00 38.45 2.52
6050 12072 5.485620 GGTGTACTTCCTCCGTAAAGAAAT 58.514 41.667 0.00 0.00 0.00 2.17
6051 12073 6.625740 CGGTGTACTTCCTCCGTAAAGAAATA 60.626 42.308 0.00 0.00 38.45 1.40
6052 12074 7.270779 GGTGTACTTCCTCCGTAAAGAAATAT 58.729 38.462 0.00 0.00 0.00 1.28
6053 12075 8.416329 GGTGTACTTCCTCCGTAAAGAAATATA 58.584 37.037 0.00 0.00 0.00 0.86
6054 12076 9.807649 GTGTACTTCCTCCGTAAAGAAATATAA 57.192 33.333 0.00 0.00 0.00 0.98
6059 12081 9.130312 CTTCCTCCGTAAAGAAATATAAGATCG 57.870 37.037 0.00 0.00 0.00 3.69
6062 12084 9.257651 CCTCCGTAAAGAAATATAAGATCGTTT 57.742 33.333 0.00 0.00 0.00 3.60
6130 12154 7.786178 TGAAGAAGATGAACATTTATACCCG 57.214 36.000 0.00 0.00 0.00 5.28
6142 12166 6.514947 ACATTTATACCCGTTCGCTTACATA 58.485 36.000 0.00 0.00 0.00 2.29
6187 12212 6.440647 ACAATCTTTAGTAGTGTCATCCAGGA 59.559 38.462 0.00 0.00 0.00 3.86
6195 12220 3.458831 AGTGTCATCCAGGAAAGGATCT 58.541 45.455 0.00 0.00 45.16 2.75
6206 12232 4.163078 CAGGAAAGGATCTAGCTCTGGAAA 59.837 45.833 0.00 0.00 0.00 3.13
6221 12247 3.044986 CTGGAAAAACGTTGCAGACATG 58.955 45.455 0.00 0.00 39.78 3.21
6229 12255 2.096268 ACGTTGCAGACATGAACATTCG 60.096 45.455 0.00 0.00 0.00 3.34
6302 12334 6.120378 CAGACATCAACATCTGGAATTCTG 57.880 41.667 5.23 0.00 38.97 3.02
6303 12335 5.066117 CAGACATCAACATCTGGAATTCTGG 59.934 44.000 5.23 0.00 38.97 3.86
6304 12336 5.045359 AGACATCAACATCTGGAATTCTGGA 60.045 40.000 5.23 4.54 0.00 3.86
6310 12342 3.782523 ACATCTGGAATTCTGGAGGCTTA 59.217 43.478 5.23 0.00 0.00 3.09
6314 12350 4.536090 TCTGGAATTCTGGAGGCTTAAGAA 59.464 41.667 6.67 13.23 34.61 2.52
6334 12370 2.680312 TTGCTGCAGTCCTGAGATAC 57.320 50.000 16.64 0.00 0.00 2.24
6371 12414 8.548880 AATTCATCTTCAGATTGGATTGGATT 57.451 30.769 0.00 0.00 31.21 3.01
6400 12443 7.928706 AGTGAAAGGATTCGAGGTATCATTTAG 59.071 37.037 7.88 0.00 36.48 1.85
6415 12458 4.610333 TCATTTAGAGAGTGGGACAGCTA 58.390 43.478 0.00 0.00 41.80 3.32
6426 12469 0.179124 GGACAGCTACCTGAAGAGCG 60.179 60.000 0.00 0.00 43.72 5.03
6499 12542 6.408662 GGAAGAAACTACTGGGATAGAGCAAT 60.409 42.308 0.00 0.00 0.00 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.164620 TGACCTATTTCTCTCAACATGCA 57.835 39.130 0.00 0.00 0.00 3.96
1 2 6.690194 ATTGACCTATTTCTCTCAACATGC 57.310 37.500 0.00 0.00 0.00 4.06
62 63 9.622004 CGAAGAATAAGTTGTGTCTACTCTTTA 57.378 33.333 0.00 0.00 0.00 1.85
63 64 8.358148 TCGAAGAATAAGTTGTGTCTACTCTTT 58.642 33.333 0.00 0.00 0.00 2.52
64 65 7.883217 TCGAAGAATAAGTTGTGTCTACTCTT 58.117 34.615 0.00 0.00 0.00 2.85
65 66 7.175293 ACTCGAAGAATAAGTTGTGTCTACTCT 59.825 37.037 0.00 0.00 34.09 3.24
66 67 7.306953 ACTCGAAGAATAAGTTGTGTCTACTC 58.693 38.462 0.00 0.00 34.09 2.59
67 68 7.040617 TGACTCGAAGAATAAGTTGTGTCTACT 60.041 37.037 0.00 0.00 34.09 2.57
68 69 7.082602 TGACTCGAAGAATAAGTTGTGTCTAC 58.917 38.462 0.00 0.00 34.09 2.59
69 70 7.040617 ACTGACTCGAAGAATAAGTTGTGTCTA 60.041 37.037 0.00 0.00 34.09 2.59
70 71 6.085555 TGACTCGAAGAATAAGTTGTGTCT 57.914 37.500 0.00 0.00 34.09 3.41
71 72 5.921408 ACTGACTCGAAGAATAAGTTGTGTC 59.079 40.000 0.00 0.00 34.09 3.67
72 73 5.844004 ACTGACTCGAAGAATAAGTTGTGT 58.156 37.500 0.00 0.00 34.09 3.72
73 74 6.153067 AGACTGACTCGAAGAATAAGTTGTG 58.847 40.000 0.00 0.00 34.09 3.33
74 75 6.334102 AGACTGACTCGAAGAATAAGTTGT 57.666 37.500 0.00 0.00 34.09 3.32
75 76 7.409874 CGAAAGACTGACTCGAAGAATAAGTTG 60.410 40.741 0.00 0.00 34.09 3.16
76 77 6.583050 CGAAAGACTGACTCGAAGAATAAGTT 59.417 38.462 0.00 0.00 34.09 2.66
77 78 6.087522 CGAAAGACTGACTCGAAGAATAAGT 58.912 40.000 0.00 0.00 34.09 2.24
78 79 5.513495 CCGAAAGACTGACTCGAAGAATAAG 59.487 44.000 4.01 0.00 34.09 1.73
79 80 5.399858 CCGAAAGACTGACTCGAAGAATAA 58.600 41.667 4.01 0.00 34.09 1.40
80 81 4.142447 CCCGAAAGACTGACTCGAAGAATA 60.142 45.833 4.01 0.00 34.09 1.75
81 82 3.367498 CCCGAAAGACTGACTCGAAGAAT 60.367 47.826 4.01 0.00 34.09 2.40
82 83 2.030185 CCCGAAAGACTGACTCGAAGAA 60.030 50.000 4.01 0.00 34.09 2.52
83 84 1.540267 CCCGAAAGACTGACTCGAAGA 59.460 52.381 4.01 0.00 34.52 2.87
84 85 1.983972 CCCGAAAGACTGACTCGAAG 58.016 55.000 4.01 0.00 34.52 3.79
85 86 0.038526 GCCCGAAAGACTGACTCGAA 60.039 55.000 4.01 0.00 34.52 3.71
86 87 0.894184 AGCCCGAAAGACTGACTCGA 60.894 55.000 4.01 0.00 34.52 4.04
87 88 0.456995 GAGCCCGAAAGACTGACTCG 60.457 60.000 0.00 0.00 0.00 4.18
88 89 0.456995 CGAGCCCGAAAGACTGACTC 60.457 60.000 0.00 0.00 38.22 3.36
89 90 1.587054 CGAGCCCGAAAGACTGACT 59.413 57.895 0.00 0.00 38.22 3.41
90 91 1.446272 CCGAGCCCGAAAGACTGAC 60.446 63.158 0.00 0.00 38.22 3.51
91 92 0.970937 ATCCGAGCCCGAAAGACTGA 60.971 55.000 0.00 0.00 38.22 3.41
92 93 0.528684 GATCCGAGCCCGAAAGACTG 60.529 60.000 0.00 0.00 38.22 3.51
93 94 1.677637 GGATCCGAGCCCGAAAGACT 61.678 60.000 0.00 0.00 38.22 3.24
94 95 1.227292 GGATCCGAGCCCGAAAGAC 60.227 63.158 0.00 0.00 38.22 3.01
95 96 1.381327 AGGATCCGAGCCCGAAAGA 60.381 57.895 5.98 0.00 38.22 2.52
96 97 1.068250 GAGGATCCGAGCCCGAAAG 59.932 63.158 5.98 0.00 38.22 2.62
97 98 3.217231 GAGGATCCGAGCCCGAAA 58.783 61.111 5.98 0.00 38.22 3.46
108 109 3.665190 ACGAACAAACTTGAGGAGGATC 58.335 45.455 0.00 0.00 0.00 3.36
109 110 3.771577 ACGAACAAACTTGAGGAGGAT 57.228 42.857 0.00 0.00 0.00 3.24
110 111 3.006537 CCTACGAACAAACTTGAGGAGGA 59.993 47.826 8.76 0.00 35.42 3.71
111 112 3.326747 CCTACGAACAAACTTGAGGAGG 58.673 50.000 0.00 0.00 0.00 4.30
112 113 3.006537 TCCCTACGAACAAACTTGAGGAG 59.993 47.826 0.00 0.00 0.00 3.69
113 114 2.967201 TCCCTACGAACAAACTTGAGGA 59.033 45.455 0.00 0.00 0.00 3.71
114 115 3.064931 GTCCCTACGAACAAACTTGAGG 58.935 50.000 0.00 0.00 0.00 3.86
128 129 2.563702 CTCTGTCTAGTCCGTCCCTAC 58.436 57.143 0.00 0.00 0.00 3.18
129 130 1.134159 GCTCTGTCTAGTCCGTCCCTA 60.134 57.143 0.00 0.00 0.00 3.53
130 131 0.394625 GCTCTGTCTAGTCCGTCCCT 60.395 60.000 0.00 0.00 0.00 4.20
131 132 0.394625 AGCTCTGTCTAGTCCGTCCC 60.395 60.000 0.00 0.00 0.00 4.46
132 133 1.018910 GAGCTCTGTCTAGTCCGTCC 58.981 60.000 6.43 0.00 0.00 4.79
133 134 1.018910 GGAGCTCTGTCTAGTCCGTC 58.981 60.000 14.64 0.00 0.00 4.79
134 135 0.745128 CGGAGCTCTGTCTAGTCCGT 60.745 60.000 14.84 0.00 44.18 4.69
135 136 2.018544 CGGAGCTCTGTCTAGTCCG 58.981 63.158 14.84 2.39 43.82 4.79
136 137 1.730451 GCCGGAGCTCTGTCTAGTCC 61.730 65.000 21.06 0.00 35.50 3.85
137 138 1.731093 GCCGGAGCTCTGTCTAGTC 59.269 63.158 21.06 0.00 35.50 2.59
138 139 2.115911 CGCCGGAGCTCTGTCTAGT 61.116 63.158 21.06 0.00 36.60 2.57
139 140 0.814410 TACGCCGGAGCTCTGTCTAG 60.814 60.000 21.06 11.18 36.60 2.43
140 141 0.814410 CTACGCCGGAGCTCTGTCTA 60.814 60.000 21.06 6.39 36.60 2.59
141 142 2.045242 TACGCCGGAGCTCTGTCT 60.045 61.111 21.06 5.55 36.60 3.41
142 143 1.448922 ATCTACGCCGGAGCTCTGTC 61.449 60.000 21.06 7.75 36.60 3.51
143 144 1.038130 AATCTACGCCGGAGCTCTGT 61.038 55.000 21.06 12.99 36.60 3.41
144 145 0.103208 AAATCTACGCCGGAGCTCTG 59.897 55.000 16.14 16.14 36.60 3.35
145 146 0.386113 GAAATCTACGCCGGAGCTCT 59.614 55.000 14.64 0.00 36.60 4.09
146 147 0.386113 AGAAATCTACGCCGGAGCTC 59.614 55.000 5.05 4.71 36.60 4.09
147 148 0.103208 CAGAAATCTACGCCGGAGCT 59.897 55.000 5.05 0.00 36.60 4.09
148 149 1.491505 GCAGAAATCTACGCCGGAGC 61.492 60.000 5.05 0.00 0.00 4.70
149 150 0.876342 GGCAGAAATCTACGCCGGAG 60.876 60.000 5.05 3.72 34.26 4.63
150 151 1.143183 GGCAGAAATCTACGCCGGA 59.857 57.895 5.05 0.00 34.26 5.14
151 152 3.719214 GGCAGAAATCTACGCCGG 58.281 61.111 0.00 0.00 34.26 6.13
153 154 0.462759 AGCTGGCAGAAATCTACGCC 60.463 55.000 20.86 5.13 45.11 5.68
154 155 0.933796 GAGCTGGCAGAAATCTACGC 59.066 55.000 20.86 0.00 0.00 4.42
155 156 1.137872 AGGAGCTGGCAGAAATCTACG 59.862 52.381 20.86 0.00 0.00 3.51
156 157 2.801342 CGAGGAGCTGGCAGAAATCTAC 60.801 54.545 20.86 6.31 0.00 2.59
157 158 1.410517 CGAGGAGCTGGCAGAAATCTA 59.589 52.381 20.86 0.00 0.00 1.98
158 159 0.177604 CGAGGAGCTGGCAGAAATCT 59.822 55.000 20.86 5.22 0.00 2.40
159 160 0.813210 CCGAGGAGCTGGCAGAAATC 60.813 60.000 20.86 12.21 0.00 2.17
160 161 1.222936 CCGAGGAGCTGGCAGAAAT 59.777 57.895 20.86 2.34 0.00 2.17
161 162 1.892819 CTCCGAGGAGCTGGCAGAAA 61.893 60.000 20.86 0.00 35.31 2.52
162 163 2.283894 TCCGAGGAGCTGGCAGAA 60.284 61.111 20.86 0.00 0.00 3.02
163 164 2.757508 CTCCGAGGAGCTGGCAGA 60.758 66.667 20.86 0.00 35.31 4.26
192 193 2.741211 GCACGACGAGAAACCCCC 60.741 66.667 0.00 0.00 0.00 5.40
193 194 0.108520 TATGCACGACGAGAAACCCC 60.109 55.000 0.00 0.00 0.00 4.95
194 195 0.997196 GTATGCACGACGAGAAACCC 59.003 55.000 0.00 0.00 0.00 4.11
195 196 1.389106 GTGTATGCACGACGAGAAACC 59.611 52.381 0.00 0.00 35.75 3.27
196 197 2.763930 GTGTATGCACGACGAGAAAC 57.236 50.000 0.00 0.00 35.75 2.78
206 207 4.864916 AATCTCGTCATTGTGTATGCAC 57.135 40.909 7.03 7.03 45.44 4.57
207 208 4.094739 CCAAATCTCGTCATTGTGTATGCA 59.905 41.667 0.00 0.00 34.06 3.96
208 209 4.094887 ACCAAATCTCGTCATTGTGTATGC 59.905 41.667 0.00 0.00 34.06 3.14
209 210 5.122239 ACACCAAATCTCGTCATTGTGTATG 59.878 40.000 0.00 0.00 35.45 2.39
210 211 5.245531 ACACCAAATCTCGTCATTGTGTAT 58.754 37.500 0.00 0.00 0.00 2.29
211 212 4.637276 ACACCAAATCTCGTCATTGTGTA 58.363 39.130 0.00 0.00 0.00 2.90
212 213 3.476552 ACACCAAATCTCGTCATTGTGT 58.523 40.909 0.00 0.00 0.00 3.72
213 214 3.498018 TGACACCAAATCTCGTCATTGTG 59.502 43.478 0.00 0.00 33.61 3.33
214 215 3.738982 TGACACCAAATCTCGTCATTGT 58.261 40.909 0.00 0.00 33.61 2.71
215 216 3.996363 TCTGACACCAAATCTCGTCATTG 59.004 43.478 0.00 0.00 37.72 2.82
216 217 4.271696 TCTGACACCAAATCTCGTCATT 57.728 40.909 0.00 0.00 37.72 2.57
217 218 3.961480 TCTGACACCAAATCTCGTCAT 57.039 42.857 0.00 0.00 37.72 3.06
218 219 3.961480 ATCTGACACCAAATCTCGTCA 57.039 42.857 0.00 0.00 36.92 4.35
219 220 4.499183 AGAATCTGACACCAAATCTCGTC 58.501 43.478 0.00 0.00 0.00 4.20
220 221 4.543590 AGAATCTGACACCAAATCTCGT 57.456 40.909 0.00 0.00 0.00 4.18
221 222 4.931601 TGAAGAATCTGACACCAAATCTCG 59.068 41.667 0.00 0.00 0.00 4.04
222 223 6.998968 ATGAAGAATCTGACACCAAATCTC 57.001 37.500 0.00 0.00 0.00 2.75
223 224 8.900781 CAATATGAAGAATCTGACACCAAATCT 58.099 33.333 0.00 0.00 0.00 2.40
224 225 8.896744 TCAATATGAAGAATCTGACACCAAATC 58.103 33.333 0.00 0.00 0.00 2.17
225 226 8.812513 TCAATATGAAGAATCTGACACCAAAT 57.187 30.769 0.00 0.00 0.00 2.32
226 227 8.812513 ATCAATATGAAGAATCTGACACCAAA 57.187 30.769 0.00 0.00 0.00 3.28
227 228 8.812513 AATCAATATGAAGAATCTGACACCAA 57.187 30.769 0.00 0.00 0.00 3.67
228 229 8.048514 TGAATCAATATGAAGAATCTGACACCA 58.951 33.333 0.00 0.00 0.00 4.17
229 230 8.442632 TGAATCAATATGAAGAATCTGACACC 57.557 34.615 0.00 0.00 0.00 4.16
246 247 9.476202 TCGTCGTCATTAAATCTATGAATCAAT 57.524 29.630 0.00 0.00 34.06 2.57
247 248 8.752254 GTCGTCGTCATTAAATCTATGAATCAA 58.248 33.333 0.00 0.00 34.06 2.57
248 249 8.135529 AGTCGTCGTCATTAAATCTATGAATCA 58.864 33.333 0.00 0.00 34.06 2.57
249 250 8.420945 CAGTCGTCGTCATTAAATCTATGAATC 58.579 37.037 0.00 0.00 34.06 2.52
250 251 7.096023 GCAGTCGTCGTCATTAAATCTATGAAT 60.096 37.037 0.00 0.00 34.06 2.57
251 252 6.198403 GCAGTCGTCGTCATTAAATCTATGAA 59.802 38.462 0.00 0.00 34.06 2.57
252 253 5.685954 GCAGTCGTCGTCATTAAATCTATGA 59.314 40.000 0.00 0.00 0.00 2.15
253 254 5.386424 CGCAGTCGTCGTCATTAAATCTATG 60.386 44.000 0.00 0.00 0.00 2.23
254 255 4.675565 CGCAGTCGTCGTCATTAAATCTAT 59.324 41.667 0.00 0.00 0.00 1.98
255 256 4.033019 CGCAGTCGTCGTCATTAAATCTA 58.967 43.478 0.00 0.00 0.00 1.98
256 257 2.852413 CGCAGTCGTCGTCATTAAATCT 59.148 45.455 0.00 0.00 0.00 2.40
257 258 2.034842 CCGCAGTCGTCGTCATTAAATC 60.035 50.000 0.00 0.00 0.00 2.17
258 259 1.924524 CCGCAGTCGTCGTCATTAAAT 59.075 47.619 0.00 0.00 0.00 1.40
259 260 1.342555 CCGCAGTCGTCGTCATTAAA 58.657 50.000 0.00 0.00 0.00 1.52
260 261 1.074319 GCCGCAGTCGTCGTCATTAA 61.074 55.000 0.00 0.00 0.00 1.40
261 262 1.515519 GCCGCAGTCGTCGTCATTA 60.516 57.895 0.00 0.00 0.00 1.90
262 263 2.809601 GCCGCAGTCGTCGTCATT 60.810 61.111 0.00 0.00 0.00 2.57
263 264 3.685214 GAGCCGCAGTCGTCGTCAT 62.685 63.158 0.00 0.00 0.00 3.06
264 265 4.400109 GAGCCGCAGTCGTCGTCA 62.400 66.667 0.00 0.00 0.00 4.35
279 280 1.672854 TATGGACCAGCGTTCGGGAG 61.673 60.000 0.00 0.00 0.00 4.30
280 281 1.672854 CTATGGACCAGCGTTCGGGA 61.673 60.000 0.00 0.00 0.00 5.14
281 282 1.227263 CTATGGACCAGCGTTCGGG 60.227 63.158 0.00 0.00 0.00 5.14
282 283 1.227263 CCTATGGACCAGCGTTCGG 60.227 63.158 0.00 0.00 0.00 4.30
283 284 1.227263 CCCTATGGACCAGCGTTCG 60.227 63.158 0.00 0.00 0.00 3.95
284 285 1.146263 CCCCTATGGACCAGCGTTC 59.854 63.158 0.00 0.00 35.39 3.95
285 286 3.043999 GCCCCTATGGACCAGCGTT 62.044 63.158 0.00 0.00 35.39 4.84
286 287 3.480133 GCCCCTATGGACCAGCGT 61.480 66.667 0.00 0.00 35.39 5.07
287 288 3.479203 TGCCCCTATGGACCAGCG 61.479 66.667 0.00 0.00 35.39 5.18
288 289 2.193248 GTGCCCCTATGGACCAGC 59.807 66.667 0.00 0.00 35.39 4.85
289 290 2.367202 ACGTGCCCCTATGGACCAG 61.367 63.158 0.00 0.00 35.39 4.00
290 291 2.285069 ACGTGCCCCTATGGACCA 60.285 61.111 0.00 0.00 35.39 4.02
291 292 2.189521 CACGTGCCCCTATGGACC 59.810 66.667 0.82 0.00 35.39 4.46
292 293 2.513897 GCACGTGCCCCTATGGAC 60.514 66.667 30.12 0.00 35.39 4.02
293 294 3.006133 TGCACGTGCCCCTATGGA 61.006 61.111 35.72 13.53 41.18 3.41
294 295 2.824041 GTGCACGTGCCCCTATGG 60.824 66.667 35.72 0.00 41.18 2.74
295 296 3.195002 CGTGCACGTGCCCCTATG 61.195 66.667 35.72 19.51 41.18 2.23
296 297 2.852495 CTTCGTGCACGTGCCCCTAT 62.852 60.000 35.72 0.00 41.18 2.57
297 298 3.583276 CTTCGTGCACGTGCCCCTA 62.583 63.158 35.72 16.34 41.18 3.53
298 299 4.988598 CTTCGTGCACGTGCCCCT 62.989 66.667 35.72 0.00 41.18 4.79
299 300 4.980805 TCTTCGTGCACGTGCCCC 62.981 66.667 35.72 24.77 41.18 5.80
300 301 3.712881 GTCTTCGTGCACGTGCCC 61.713 66.667 35.72 25.39 41.18 5.36
301 302 2.159272 GAAGTCTTCGTGCACGTGCC 62.159 60.000 35.72 25.12 41.18 5.01
302 303 1.201825 GAAGTCTTCGTGCACGTGC 59.798 57.895 35.74 33.11 40.80 5.34
303 304 1.557443 GGGAAGTCTTCGTGCACGTG 61.557 60.000 35.74 28.05 40.80 4.49
304 305 1.300697 GGGAAGTCTTCGTGCACGT 60.301 57.895 35.74 18.16 40.80 4.49
305 306 1.284982 CTGGGAAGTCTTCGTGCACG 61.285 60.000 32.76 32.76 41.45 5.34
306 307 0.249911 ACTGGGAAGTCTTCGTGCAC 60.250 55.000 6.82 6.82 0.00 4.57
307 308 0.468226 AACTGGGAAGTCTTCGTGCA 59.532 50.000 6.50 0.00 0.00 4.57
308 309 1.594331 AAACTGGGAAGTCTTCGTGC 58.406 50.000 6.50 0.00 0.00 5.34
309 310 2.221055 CGAAAACTGGGAAGTCTTCGTG 59.779 50.000 6.50 2.23 32.98 4.35
310 311 2.159000 ACGAAAACTGGGAAGTCTTCGT 60.159 45.455 12.74 12.74 42.73 3.85
311 312 2.475487 GACGAAAACTGGGAAGTCTTCG 59.525 50.000 11.60 11.60 40.96 3.79
312 313 2.475487 CGACGAAAACTGGGAAGTCTTC 59.525 50.000 3.80 3.80 0.00 2.87
313 314 2.101917 TCGACGAAAACTGGGAAGTCTT 59.898 45.455 0.00 0.00 0.00 3.01
314 315 1.684983 TCGACGAAAACTGGGAAGTCT 59.315 47.619 0.00 0.00 0.00 3.24
315 316 1.791204 GTCGACGAAAACTGGGAAGTC 59.209 52.381 0.00 0.00 0.00 3.01
316 317 1.137479 TGTCGACGAAAACTGGGAAGT 59.863 47.619 11.62 0.00 0.00 3.01
317 318 1.860676 TGTCGACGAAAACTGGGAAG 58.139 50.000 11.62 0.00 0.00 3.46
318 319 2.206750 CTTGTCGACGAAAACTGGGAA 58.793 47.619 11.62 0.00 0.00 3.97
319 320 1.539496 CCTTGTCGACGAAAACTGGGA 60.539 52.381 11.62 0.00 0.00 4.37
320 321 0.865769 CCTTGTCGACGAAAACTGGG 59.134 55.000 11.62 1.44 0.00 4.45
321 322 1.525619 GACCTTGTCGACGAAAACTGG 59.474 52.381 11.62 8.69 0.00 4.00
322 323 2.198406 TGACCTTGTCGACGAAAACTG 58.802 47.619 11.62 0.00 34.95 3.16
323 324 2.589798 TGACCTTGTCGACGAAAACT 57.410 45.000 11.62 0.00 34.95 2.66
324 325 3.661758 TTTGACCTTGTCGACGAAAAC 57.338 42.857 11.62 3.16 34.95 2.43
325 326 3.060138 CGATTTGACCTTGTCGACGAAAA 60.060 43.478 11.62 6.94 36.25 2.29
326 327 2.473609 CGATTTGACCTTGTCGACGAAA 59.526 45.455 11.62 0.00 36.25 3.46
327 328 2.055838 CGATTTGACCTTGTCGACGAA 58.944 47.619 11.62 5.72 36.25 3.85
328 329 1.667756 CCGATTTGACCTTGTCGACGA 60.668 52.381 11.62 8.40 36.25 4.20
329 330 0.713883 CCGATTTGACCTTGTCGACG 59.286 55.000 11.62 0.00 36.25 5.12
330 331 0.442699 GCCGATTTGACCTTGTCGAC 59.557 55.000 9.11 9.11 36.25 4.20
331 332 0.320374 AGCCGATTTGACCTTGTCGA 59.680 50.000 0.00 0.00 36.25 4.20
332 333 0.721718 GAGCCGATTTGACCTTGTCG 59.278 55.000 0.00 0.00 34.95 4.35
333 334 1.087501 GGAGCCGATTTGACCTTGTC 58.912 55.000 0.00 0.00 0.00 3.18
334 335 0.693049 AGGAGCCGATTTGACCTTGT 59.307 50.000 0.00 0.00 0.00 3.16
335 336 1.089920 CAGGAGCCGATTTGACCTTG 58.910 55.000 0.00 0.00 0.00 3.61
336 337 0.693049 ACAGGAGCCGATTTGACCTT 59.307 50.000 0.00 0.00 0.00 3.50
337 338 1.568504 TACAGGAGCCGATTTGACCT 58.431 50.000 0.00 0.00 0.00 3.85
338 339 2.213499 CATACAGGAGCCGATTTGACC 58.787 52.381 0.00 0.00 0.00 4.02
339 340 2.213499 CCATACAGGAGCCGATTTGAC 58.787 52.381 0.00 0.00 41.22 3.18
340 341 1.140852 CCCATACAGGAGCCGATTTGA 59.859 52.381 0.00 0.00 41.22 2.69
341 342 1.140852 TCCCATACAGGAGCCGATTTG 59.859 52.381 0.00 0.00 41.22 2.32
342 343 1.417890 CTCCCATACAGGAGCCGATTT 59.582 52.381 0.00 0.00 46.76 2.17
343 344 1.051812 CTCCCATACAGGAGCCGATT 58.948 55.000 0.00 0.00 46.76 3.34
344 345 2.751991 CTCCCATACAGGAGCCGAT 58.248 57.895 0.00 0.00 46.76 4.18
345 346 4.277552 CTCCCATACAGGAGCCGA 57.722 61.111 0.00 0.00 46.76 5.54
350 351 3.536917 CGCCGCTCCCATACAGGA 61.537 66.667 0.00 0.00 41.22 3.86
351 352 3.536917 TCGCCGCTCCCATACAGG 61.537 66.667 0.00 0.00 37.03 4.00
352 353 2.279517 GTCGCCGCTCCCATACAG 60.280 66.667 0.00 0.00 0.00 2.74
353 354 4.201679 CGTCGCCGCTCCCATACA 62.202 66.667 0.00 0.00 0.00 2.29
354 355 4.944372 CCGTCGCCGCTCCCATAC 62.944 72.222 0.00 0.00 0.00 2.39
362 363 4.322385 AAAACAAGCCGTCGCCGC 62.322 61.111 0.00 0.00 34.57 6.53
363 364 2.426752 CAAAACAAGCCGTCGCCG 60.427 61.111 0.00 0.00 34.57 6.46
364 365 1.370051 GTCAAAACAAGCCGTCGCC 60.370 57.895 0.00 0.00 34.57 5.54
365 366 1.370051 GGTCAAAACAAGCCGTCGC 60.370 57.895 0.00 0.00 0.00 5.19
366 367 0.316689 GTGGTCAAAACAAGCCGTCG 60.317 55.000 0.00 0.00 0.00 5.12
367 368 0.736053 TGTGGTCAAAACAAGCCGTC 59.264 50.000 0.00 0.00 0.00 4.79
368 369 1.135228 GTTGTGGTCAAAACAAGCCGT 60.135 47.619 0.00 0.00 38.17 5.68
369 370 1.135257 TGTTGTGGTCAAAACAAGCCG 60.135 47.619 4.38 0.00 38.17 5.52
370 371 2.663826 TGTTGTGGTCAAAACAAGCC 57.336 45.000 4.38 0.00 38.17 4.35
371 372 3.242381 GCATTGTTGTGGTCAAAACAAGC 60.242 43.478 19.96 18.30 46.28 4.01
372 373 3.000122 CGCATTGTTGTGGTCAAAACAAG 60.000 43.478 19.96 14.32 46.28 3.16
373 374 2.926200 CGCATTGTTGTGGTCAAAACAA 59.074 40.909 18.27 18.27 46.90 2.83
374 375 2.094494 ACGCATTGTTGTGGTCAAAACA 60.094 40.909 2.81 2.81 37.69 2.83
375 376 2.535331 ACGCATTGTTGTGGTCAAAAC 58.465 42.857 0.00 0.00 37.69 2.43
376 377 2.949451 ACGCATTGTTGTGGTCAAAA 57.051 40.000 0.00 0.00 37.69 2.44
377 378 2.949451 AACGCATTGTTGTGGTCAAA 57.051 40.000 0.00 0.00 40.00 2.69
380 381 0.385473 CCGAACGCATTGTTGTGGTC 60.385 55.000 0.00 0.00 44.88 4.02
381 382 1.098712 ACCGAACGCATTGTTGTGGT 61.099 50.000 0.00 0.00 42.09 4.16
382 383 0.030101 AACCGAACGCATTGTTGTGG 59.970 50.000 0.00 0.00 42.09 4.17
383 384 1.119635 CAACCGAACGCATTGTTGTG 58.880 50.000 0.00 0.00 42.09 3.33
384 385 0.736053 ACAACCGAACGCATTGTTGT 59.264 45.000 11.55 11.55 44.61 3.32
385 386 1.394697 GACAACCGAACGCATTGTTG 58.605 50.000 13.26 11.94 42.09 3.33
386 387 0.309612 GGACAACCGAACGCATTGTT 59.690 50.000 13.26 0.41 45.61 2.83
387 388 0.816018 TGGACAACCGAACGCATTGT 60.816 50.000 12.36 12.36 39.23 2.71
388 389 0.521291 ATGGACAACCGAACGCATTG 59.479 50.000 0.00 0.00 39.42 2.82
389 390 0.521291 CATGGACAACCGAACGCATT 59.479 50.000 0.00 0.00 39.42 3.56
390 391 1.305219 CCATGGACAACCGAACGCAT 61.305 55.000 5.56 0.00 39.42 4.73
391 392 1.963855 CCATGGACAACCGAACGCA 60.964 57.895 5.56 0.00 39.42 5.24
392 393 1.669760 TCCATGGACAACCGAACGC 60.670 57.895 11.44 0.00 39.42 4.84
393 394 1.296056 GGTCCATGGACAACCGAACG 61.296 60.000 38.83 0.00 46.20 3.95
394 395 0.036306 AGGTCCATGGACAACCGAAC 59.964 55.000 38.83 23.12 46.20 3.95
395 396 0.323629 GAGGTCCATGGACAACCGAA 59.676 55.000 38.83 4.18 46.20 4.30
396 397 1.884075 CGAGGTCCATGGACAACCGA 61.884 60.000 38.83 4.99 46.20 4.69
397 398 1.447838 CGAGGTCCATGGACAACCG 60.448 63.158 38.83 32.05 46.20 4.44
398 399 0.541863 ATCGAGGTCCATGGACAACC 59.458 55.000 38.83 26.31 46.20 3.77
399 400 1.656652 CATCGAGGTCCATGGACAAC 58.343 55.000 38.83 29.93 46.20 3.32
400 401 0.107703 GCATCGAGGTCCATGGACAA 60.108 55.000 38.83 24.07 46.20 3.18
401 402 1.264045 TGCATCGAGGTCCATGGACA 61.264 55.000 38.83 23.40 46.20 4.02
402 403 0.107703 TTGCATCGAGGTCCATGGAC 60.108 55.000 33.14 33.14 43.87 4.02
403 404 0.839277 ATTGCATCGAGGTCCATGGA 59.161 50.000 11.44 11.44 0.00 3.41
404 405 1.683943 AATTGCATCGAGGTCCATGG 58.316 50.000 4.97 4.97 0.00 3.66
405 406 3.788333 AAAATTGCATCGAGGTCCATG 57.212 42.857 0.00 0.00 0.00 3.66
406 407 6.469782 AATAAAAATTGCATCGAGGTCCAT 57.530 33.333 0.00 0.00 0.00 3.41
407 408 5.913137 AATAAAAATTGCATCGAGGTCCA 57.087 34.783 0.00 0.00 0.00 4.02
408 409 7.425606 ACATAATAAAAATTGCATCGAGGTCC 58.574 34.615 0.00 0.00 0.00 4.46
409 410 8.856490 AACATAATAAAAATTGCATCGAGGTC 57.144 30.769 0.00 0.00 0.00 3.85
410 411 9.086336 CAAACATAATAAAAATTGCATCGAGGT 57.914 29.630 0.00 0.00 0.00 3.85
411 412 8.542132 CCAAACATAATAAAAATTGCATCGAGG 58.458 33.333 0.00 0.00 0.00 4.63
412 413 9.299963 TCCAAACATAATAAAAATTGCATCGAG 57.700 29.630 0.00 0.00 0.00 4.04
413 414 9.299963 CTCCAAACATAATAAAAATTGCATCGA 57.700 29.630 0.00 0.00 0.00 3.59
414 415 9.086336 ACTCCAAACATAATAAAAATTGCATCG 57.914 29.630 0.00 0.00 0.00 3.84
416 417 9.723601 ACACTCCAAACATAATAAAAATTGCAT 57.276 25.926 0.00 0.00 0.00 3.96
417 418 9.553064 AACACTCCAAACATAATAAAAATTGCA 57.447 25.926 0.00 0.00 0.00 4.08
427 428 9.744468 GAAAGTACAAAACACTCCAAACATAAT 57.256 29.630 0.00 0.00 0.00 1.28
428 429 8.740906 TGAAAGTACAAAACACTCCAAACATAA 58.259 29.630 0.00 0.00 0.00 1.90
429 430 8.282455 TGAAAGTACAAAACACTCCAAACATA 57.718 30.769 0.00 0.00 0.00 2.29
430 431 7.164230 TGAAAGTACAAAACACTCCAAACAT 57.836 32.000 0.00 0.00 0.00 2.71
431 432 6.576662 TGAAAGTACAAAACACTCCAAACA 57.423 33.333 0.00 0.00 0.00 2.83
432 433 7.757624 TCATTGAAAGTACAAAACACTCCAAAC 59.242 33.333 0.00 0.00 33.44 2.93
433 434 7.831753 TCATTGAAAGTACAAAACACTCCAAA 58.168 30.769 0.00 0.00 33.44 3.28
434 435 7.397892 TCATTGAAAGTACAAAACACTCCAA 57.602 32.000 0.00 0.00 33.44 3.53
435 436 7.397892 TTCATTGAAAGTACAAAACACTCCA 57.602 32.000 0.00 0.00 33.44 3.86
436 437 8.352942 AGATTCATTGAAAGTACAAAACACTCC 58.647 33.333 2.68 0.00 33.44 3.85
437 438 9.736023 AAGATTCATTGAAAGTACAAAACACTC 57.264 29.630 2.68 0.00 33.44 3.51
440 441 9.868277 ACAAAGATTCATTGAAAGTACAAAACA 57.132 25.926 8.51 0.00 33.44 2.83
484 485 8.553459 TTTGTGGCAATGAGTTTTTCTAAAAA 57.447 26.923 0.00 0.00 35.67 1.94
485 486 8.553459 TTTTGTGGCAATGAGTTTTTCTAAAA 57.447 26.923 0.00 0.00 0.00 1.52
486 487 8.729805 ATTTTGTGGCAATGAGTTTTTCTAAA 57.270 26.923 0.00 0.00 0.00 1.85
487 488 9.995003 ATATTTTGTGGCAATGAGTTTTTCTAA 57.005 25.926 0.00 0.00 0.00 2.10
488 489 9.995003 AATATTTTGTGGCAATGAGTTTTTCTA 57.005 25.926 0.00 0.00 0.00 2.10
489 490 8.907222 AATATTTTGTGGCAATGAGTTTTTCT 57.093 26.923 0.00 0.00 0.00 2.52
490 491 8.772705 TGAATATTTTGTGGCAATGAGTTTTTC 58.227 29.630 0.00 0.00 0.00 2.29
491 492 8.674263 TGAATATTTTGTGGCAATGAGTTTTT 57.326 26.923 0.00 0.00 0.00 1.94
492 493 8.674263 TTGAATATTTTGTGGCAATGAGTTTT 57.326 26.923 0.00 0.00 0.00 2.43
496 497 8.547894 CATGATTGAATATTTTGTGGCAATGAG 58.452 33.333 0.00 0.00 0.00 2.90
506 508 9.880157 AGTTTCCTTCCATGATTGAATATTTTG 57.120 29.630 0.00 0.00 0.00 2.44
554 557 1.269309 CCCGTGGAAAACAAAATGCGA 60.269 47.619 0.00 0.00 0.00 5.10
563 566 0.464916 ACACAGGTCCCGTGGAAAAC 60.465 55.000 10.05 0.00 38.74 2.43
616 619 4.403113 GGCTATTTATTTGGAAACCCCGAA 59.597 41.667 0.00 0.00 42.38 4.30
1035 1145 2.741985 TCTCAATGCCGTGGCGTG 60.742 61.111 6.33 7.19 45.51 5.34
1207 1501 1.318158 CCATGGCCTGTTCTCCTTGC 61.318 60.000 3.32 0.00 0.00 4.01
1222 1516 0.750546 CATCACCTGCTGTCCCCATG 60.751 60.000 0.00 0.00 0.00 3.66
1357 1716 1.337635 CCTTCCTATGCATCGCCTCTC 60.338 57.143 0.19 0.00 0.00 3.20
1466 1869 4.427956 TCCCCAACCCCAAGATTTTAAT 57.572 40.909 0.00 0.00 0.00 1.40
1514 2553 4.709886 ACTGTCCCCAATATTTGCCTAAAC 59.290 41.667 0.00 0.00 0.00 2.01
1526 3348 2.879103 ATCGTCAAACTGTCCCCAAT 57.121 45.000 0.00 0.00 0.00 3.16
1575 3399 0.672091 TGATAGCACGCCGCAAGAAA 60.672 50.000 0.00 0.00 46.13 2.52
1625 3457 6.358178 TGGACACCTAAATGTTGAACAGTTA 58.642 36.000 16.04 16.04 37.58 2.24
1636 3468 2.489329 CACAAGCCTGGACACCTAAATG 59.511 50.000 0.00 0.00 0.00 2.32
1758 4793 0.042708 CGGCATCGAGATTTCTTGCG 60.043 55.000 0.00 0.00 39.00 4.85
1770 4805 1.651987 ACTGGTACATTTCGGCATCG 58.348 50.000 0.00 0.00 38.20 3.84
1777 4812 6.228258 TCTACACTGGAAACTGGTACATTTC 58.772 40.000 0.00 1.75 38.20 2.17
1832 4889 3.125316 GTCAAGTAATCCCGAGCAAACAG 59.875 47.826 0.00 0.00 0.00 3.16
1858 4928 5.560953 GCAAAAGGATCCAGATAATGTACGC 60.561 44.000 15.82 0.00 0.00 4.42
1898 4968 1.251251 CCAGTTTCAGCCTTTCAGGG 58.749 55.000 0.00 0.00 35.37 4.45
1982 5053 9.248291 TGAAAAAGCTAACAAGATTGAAACATC 57.752 29.630 0.00 0.00 0.00 3.06
1985 5056 7.706607 AGGTGAAAAAGCTAACAAGATTGAAAC 59.293 33.333 0.00 0.00 33.90 2.78
2226 5299 2.158813 GGTCATACCACCCACGAATCAT 60.159 50.000 0.00 0.00 38.42 2.45
2391 6469 3.594603 ATATGCTAGGATGCCACGTAC 57.405 47.619 7.05 0.00 0.00 3.67
2392 6470 4.953579 TCATATATGCTAGGATGCCACGTA 59.046 41.667 7.05 0.00 0.00 3.57
2557 6640 7.902920 ACCAAAATATTGCAGTAATCAGGAT 57.097 32.000 0.00 0.00 35.10 3.24
2620 6770 7.870509 AAAGATTCTGATAGCAGCATTTGTA 57.129 32.000 2.24 0.00 42.01 2.41
2624 6774 8.921353 AGATTAAAGATTCTGATAGCAGCATT 57.079 30.769 2.24 0.00 42.01 3.56
2891 7067 3.989056 ACCAGTCCTTTTTCCTTTTCCA 58.011 40.909 0.00 0.00 0.00 3.53
3138 7635 5.633830 TGATCCTGATTTTCTTGCACTTC 57.366 39.130 0.00 0.00 0.00 3.01
3140 7637 5.566230 GCTTTGATCCTGATTTTCTTGCACT 60.566 40.000 0.00 0.00 0.00 4.40
3141 7638 4.624452 GCTTTGATCCTGATTTTCTTGCAC 59.376 41.667 0.00 0.00 0.00 4.57
3142 7639 4.322198 GGCTTTGATCCTGATTTTCTTGCA 60.322 41.667 0.00 0.00 0.00 4.08
3143 7640 4.179298 GGCTTTGATCCTGATTTTCTTGC 58.821 43.478 0.00 0.00 0.00 4.01
3144 7641 4.465305 AGGGCTTTGATCCTGATTTTCTTG 59.535 41.667 0.00 0.00 31.11 3.02
3146 7643 4.328118 AGGGCTTTGATCCTGATTTTCT 57.672 40.909 0.00 0.00 31.11 2.52
3147 7644 7.667219 TGATATAGGGCTTTGATCCTGATTTTC 59.333 37.037 0.00 0.00 34.75 2.29
3575 8484 2.290260 TGAAGATGGTTTGCCTCGTCAT 60.290 45.455 0.00 0.00 31.46 3.06
3595 8504 5.178252 CCGGTCTACATTCTGAATAAGCATG 59.822 44.000 1.98 0.00 35.82 4.06
3836 8757 1.673329 GCTCCGGGAAAACTCAGAGTC 60.673 57.143 2.72 0.00 0.00 3.36
3898 8851 3.376859 TCCCTTGCAAGCATGTTTATACG 59.623 43.478 21.43 2.56 0.00 3.06
3955 8916 6.370186 AAGATAATGAGATGCCAGATGCTA 57.630 37.500 0.00 0.00 42.00 3.49
3972 8933 7.014134 TCTCCTGCAAATGACAAACAAAGATAA 59.986 33.333 0.00 0.00 0.00 1.75
4076 9037 3.074412 CAATCGGGTTGTTAGCTTCACT 58.926 45.455 0.00 0.00 33.01 3.41
4305 9284 8.945195 TGATCAATGGCAAGATATAAAGGAAT 57.055 30.769 5.88 0.00 0.00 3.01
4513 9510 4.008330 CAGTGAGATGGAAAGCATTCAGT 58.992 43.478 3.82 0.00 37.29 3.41
4522 9519 6.764560 CACATATCATGTCAGTGAGATGGAAA 59.235 38.462 25.33 14.01 46.71 3.13
4634 9633 5.447818 GCGATGAACAGAAGGAAATGTAAGG 60.448 44.000 0.00 0.00 0.00 2.69
4683 9682 6.795399 TCTGAGGAAAACAAAAACTAAGCAG 58.205 36.000 0.00 0.00 0.00 4.24
5145 10164 2.768527 TCTGATCACCAGGATGTTCTCC 59.231 50.000 0.00 0.00 45.33 3.71
5263 10497 1.254026 TCCGACGGAATCTGTTGACT 58.746 50.000 15.79 0.00 0.00 3.41
5278 10557 3.078837 GCCCAACTCAACTTTAATCCGA 58.921 45.455 0.00 0.00 0.00 4.55
5614 11080 2.224548 ACTCAGCCTTGTTTAGGTGACC 60.225 50.000 0.00 0.00 46.61 4.02
5620 11086 5.452777 GCAACTTAACTCAGCCTTGTTTAG 58.547 41.667 0.00 0.00 0.00 1.85
5633 11099 2.943033 AGCAGAACAACGCAACTTAACT 59.057 40.909 0.00 0.00 0.00 2.24
5643 11109 0.167470 CCATCAGCAGCAGAACAACG 59.833 55.000 0.00 0.00 0.00 4.10
5668 11134 5.732528 GCATGTGAGATCTATTGGCTTGTTG 60.733 44.000 0.00 0.00 0.00 3.33
5669 11135 4.337555 GCATGTGAGATCTATTGGCTTGTT 59.662 41.667 0.00 0.00 0.00 2.83
5670 11136 3.881688 GCATGTGAGATCTATTGGCTTGT 59.118 43.478 0.00 0.00 0.00 3.16
5919 11397 3.211045 GTTCAGACACAAGCAGGGTAAA 58.789 45.455 0.00 0.00 30.42 2.01
5969 11447 0.542702 ACAGGTTCCCCAAGCCATTG 60.543 55.000 0.00 0.00 36.09 2.82
6028 12044 9.807649 TTATATTTCTTTACGGAGGAAGTACAC 57.192 33.333 0.00 0.00 0.00 2.90
6035 12051 8.174733 ACGATCTTATATTTCTTTACGGAGGA 57.825 34.615 0.00 0.00 0.00 3.71
6053 12075 9.214957 TGACATGTAAAATCACTAAACGATCTT 57.785 29.630 0.00 0.00 0.00 2.40
6054 12076 8.771920 TGACATGTAAAATCACTAAACGATCT 57.228 30.769 0.00 0.00 0.00 2.75
6055 12077 9.425893 CATGACATGTAAAATCACTAAACGATC 57.574 33.333 7.31 0.00 0.00 3.69
6057 12079 7.095017 TGCATGACATGTAAAATCACTAAACGA 60.095 33.333 16.62 0.00 0.00 3.85
6059 12081 7.273381 GGTGCATGACATGTAAAATCACTAAAC 59.727 37.037 16.62 0.16 0.00 2.01
6062 12084 6.179756 AGGTGCATGACATGTAAAATCACTA 58.820 36.000 16.62 0.00 0.00 2.74
6063 12085 5.012239 AGGTGCATGACATGTAAAATCACT 58.988 37.500 16.62 2.69 0.00 3.41
6065 12087 5.981088 AAGGTGCATGACATGTAAAATCA 57.019 34.783 16.62 2.49 0.00 2.57
6066 12088 5.577945 CCAAAGGTGCATGACATGTAAAATC 59.422 40.000 16.62 0.76 0.00 2.17
6067 12089 5.245751 TCCAAAGGTGCATGACATGTAAAAT 59.754 36.000 16.62 0.00 0.00 1.82
6068 12090 4.586421 TCCAAAGGTGCATGACATGTAAAA 59.414 37.500 16.62 0.00 0.00 1.52
6071 12093 3.081061 GTCCAAAGGTGCATGACATGTA 58.919 45.455 16.62 9.75 0.00 2.29
6130 12154 5.609088 CAACTTGTGACTATGTAAGCGAAC 58.391 41.667 0.00 0.00 0.00 3.95
6142 12166 2.423538 GTGGTTTCTGCAACTTGTGACT 59.576 45.455 0.00 0.00 35.46 3.41
6187 12212 4.938226 CGTTTTTCCAGAGCTAGATCCTTT 59.062 41.667 3.92 0.00 0.00 3.11
6195 12220 2.548057 CTGCAACGTTTTTCCAGAGCTA 59.452 45.455 0.00 0.00 0.00 3.32
6206 12232 3.988379 ATGTTCATGTCTGCAACGTTT 57.012 38.095 0.00 0.00 0.00 3.60
6229 12255 1.268899 TCTTCTCCTTCGTCGTTGTCC 59.731 52.381 0.00 0.00 0.00 4.02
6297 12329 4.643784 CAGCAATTCTTAAGCCTCCAGAAT 59.356 41.667 0.00 0.00 38.63 2.40
6298 12330 4.012374 CAGCAATTCTTAAGCCTCCAGAA 58.988 43.478 0.00 0.00 0.00 3.02
6299 12331 3.614092 CAGCAATTCTTAAGCCTCCAGA 58.386 45.455 0.00 0.00 0.00 3.86
6300 12332 2.098770 GCAGCAATTCTTAAGCCTCCAG 59.901 50.000 0.00 0.00 0.00 3.86
6301 12333 2.094675 GCAGCAATTCTTAAGCCTCCA 58.905 47.619 0.00 0.00 0.00 3.86
6302 12334 2.094675 TGCAGCAATTCTTAAGCCTCC 58.905 47.619 0.00 0.00 0.00 4.30
6303 12335 2.751806 ACTGCAGCAATTCTTAAGCCTC 59.248 45.455 15.27 0.00 0.00 4.70
6304 12336 2.751806 GACTGCAGCAATTCTTAAGCCT 59.248 45.455 15.27 0.00 0.00 4.58
6310 12342 2.039480 TCTCAGGACTGCAGCAATTCTT 59.961 45.455 15.27 0.00 0.00 2.52
6314 12350 2.482664 CGTATCTCAGGACTGCAGCAAT 60.483 50.000 15.27 0.00 0.00 3.56
6334 12370 7.582352 TCTGAAGATGAATTATACGTACTCCG 58.418 38.462 0.00 0.00 44.03 4.63
6371 12414 5.186992 TGATACCTCGAATCCTTTCACTTGA 59.813 40.000 0.00 0.00 0.00 3.02
6400 12443 0.820871 CAGGTAGCTGTCCCACTCTC 59.179 60.000 13.89 0.00 0.00 3.20
6415 12458 0.243095 GGAACGTACGCTCTTCAGGT 59.757 55.000 16.72 0.00 0.00 4.00
6426 12469 6.781138 TGAGCAATGATTTATTGGAACGTAC 58.219 36.000 3.65 0.00 45.09 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.