Multiple sequence alignment - TraesCS6B01G098700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G098700 chr6B 100.000 3398 0 0 1 3398 76218603 76215206 0.000000e+00 6276.0
1 TraesCS6B01G098700 chr6B 96.684 573 19 0 2826 3398 705177028 705177600 0.000000e+00 953.0
2 TraesCS6B01G098700 chr6B 97.786 271 6 0 1 271 162602193 162602463 5.130000e-128 468.0
3 TraesCS6B01G098700 chr6B 97.786 271 6 0 1 271 664741635 664741905 5.130000e-128 468.0
4 TraesCS6B01G098700 chr6B 96.000 150 6 0 268 417 64285839 64285988 9.420000e-61 244.0
5 TraesCS6B01G098700 chr6B 86.207 174 18 6 263 433 16011569 16011739 2.080000e-42 183.0
6 TraesCS6B01G098700 chr6B 86.207 174 18 6 263 433 16039326 16039496 2.080000e-42 183.0
7 TraesCS6B01G098700 chr6B 87.500 160 15 5 268 424 49370538 49370695 2.690000e-41 180.0
8 TraesCS6B01G098700 chr6A 90.550 1418 95 13 1103 2498 40581449 40580049 0.000000e+00 1840.0
9 TraesCS6B01G098700 chr6A 89.320 206 11 4 2298 2498 40579560 40579361 7.280000e-62 248.0
10 TraesCS6B01G098700 chr6A 88.966 145 13 2 929 1073 40581584 40581443 3.480000e-40 176.0
11 TraesCS6B01G098700 chr6A 88.806 134 6 4 733 862 40581726 40581598 4.540000e-34 156.0
12 TraesCS6B01G098700 chr7A 96.690 574 19 0 2825 3398 540868424 540868997 0.000000e+00 955.0
13 TraesCS6B01G098700 chr2B 96.181 576 22 0 2823 3398 733998905 733998330 0.000000e+00 942.0
14 TraesCS6B01G098700 chr2B 87.748 302 34 2 414 714 692722904 692722605 1.940000e-92 350.0
15 TraesCS6B01G098700 chr5B 96.335 573 20 1 2826 3398 614364920 614364349 0.000000e+00 941.0
16 TraesCS6B01G098700 chr5B 96.147 571 21 1 2828 3398 403154920 403154351 0.000000e+00 931.0
17 TraesCS6B01G098700 chr5B 95.238 147 7 0 268 414 474762235 474762381 2.040000e-57 233.0
18 TraesCS6B01G098700 chr1B 96.335 573 20 1 2827 3398 532154075 532153503 0.000000e+00 941.0
19 TraesCS6B01G098700 chr1B 84.830 501 61 10 1863 2350 658439420 658439918 1.100000e-134 490.0
20 TraesCS6B01G098700 chr1B 98.155 271 5 0 1 271 669969349 669969619 1.100000e-129 473.0
21 TraesCS6B01G098700 chr1B 77.591 656 102 27 1863 2495 658190169 658190802 4.170000e-94 355.0
22 TraesCS6B01G098700 chr1B 88.601 193 19 1 1102 1291 658438767 658438959 7.330000e-57 231.0
23 TraesCS6B01G098700 chr1B 88.298 188 19 2 1108 1292 658189531 658189718 4.410000e-54 222.0
24 TraesCS6B01G098700 chr1B 77.124 153 27 6 1096 1247 660824458 660824603 7.820000e-12 82.4
25 TraesCS6B01G098700 chrUn 96.322 571 21 0 2828 3398 2576270 2576840 0.000000e+00 939.0
26 TraesCS6B01G098700 chrUn 94.156 154 8 1 268 420 43067871 43068024 2.040000e-57 233.0
27 TraesCS6B01G098700 chrUn 95.205 146 7 0 268 413 42066232 42066087 7.330000e-57 231.0
28 TraesCS6B01G098700 chrUn 86.207 174 18 6 263 433 293962195 293962365 2.080000e-42 183.0
29 TraesCS6B01G098700 chrUn 86.826 167 18 4 268 433 366686349 366686186 2.080000e-42 183.0
30 TraesCS6B01G098700 chr7B 95.841 577 23 1 2822 3398 548372488 548371913 0.000000e+00 931.0
31 TraesCS6B01G098700 chr7B 97.786 271 6 0 1 271 106591127 106591397 5.130000e-128 468.0
32 TraesCS6B01G098700 chr7B 95.238 147 7 0 268 414 106591915 106592061 2.040000e-57 233.0
33 TraesCS6B01G098700 chr4A 95.690 580 24 1 2820 3398 668795281 668795860 0.000000e+00 931.0
34 TraesCS6B01G098700 chr4A 97.786 271 6 0 1 271 645930327 645930597 5.130000e-128 468.0
35 TraesCS6B01G098700 chr1D 85.629 501 57 10 1863 2350 473518720 473519218 2.340000e-141 512.0
36 TraesCS6B01G098700 chr1D 88.779 303 28 4 414 714 463264591 463264889 1.930000e-97 366.0
37 TraesCS6B01G098700 chr1D 79.108 493 82 14 1863 2355 473338289 473338760 1.520000e-83 320.0
38 TraesCS6B01G098700 chr1D 88.660 194 19 1 1102 1292 473518103 473518296 2.040000e-57 233.0
39 TraesCS6B01G098700 chr1D 86.170 188 23 1 1108 1292 473337654 473337841 2.070000e-47 200.0
40 TraesCS6B01G098700 chr1D 86.709 158 21 0 268 425 472325477 472325320 3.480000e-40 176.0
41 TraesCS6B01G098700 chr1D 89.691 97 10 0 2078 2174 20874008 20874104 1.280000e-24 124.0
42 TraesCS6B01G098700 chr1A 85.542 498 60 8 1863 2350 567599254 567599749 8.410000e-141 510.0
43 TraesCS6B01G098700 chr1A 89.175 194 18 1 1102 1292 567598598 567598791 4.380000e-59 239.0
44 TraesCS6B01G098700 chr4B 98.155 271 5 0 1 271 19777913 19778183 1.100000e-129 473.0
45 TraesCS6B01G098700 chr4B 97.786 271 6 0 1 271 515037340 515037610 5.130000e-128 468.0
46 TraesCS6B01G098700 chr4B 96.575 146 5 0 268 413 662526661 662526806 3.390000e-60 243.0
47 TraesCS6B01G098700 chr3B 98.155 271 5 0 1 271 10947508 10947778 1.100000e-129 473.0
48 TraesCS6B01G098700 chr3B 94.771 153 6 2 263 413 33315759 33315911 1.580000e-58 237.0
49 TraesCS6B01G098700 chr3B 95.890 146 6 0 268 413 35089129 35088984 1.580000e-58 237.0
50 TraesCS6B01G098700 chr3B 95.890 146 6 0 268 413 35251668 35251523 1.580000e-58 237.0
51 TraesCS6B01G098700 chr2D 97.786 271 6 0 1 271 68141684 68141414 5.130000e-128 468.0
52 TraesCS6B01G098700 chr2D 89.109 303 28 4 414 714 68918324 68918623 4.140000e-99 372.0
53 TraesCS6B01G098700 chr2D 82.591 247 37 6 414 658 77121137 77121379 2.660000e-51 213.0
54 TraesCS6B01G098700 chr2D 86.875 160 17 3 268 424 620117906 620118064 3.480000e-40 176.0
55 TraesCS6B01G098700 chr6D 87.616 323 32 4 414 735 423544454 423544769 5.360000e-98 368.0
56 TraesCS6B01G098700 chr6D 84.274 248 30 9 414 658 340435236 340434995 2.040000e-57 233.0
57 TraesCS6B01G098700 chr4D 87.129 303 34 4 414 714 365414513 365414214 4.200000e-89 339.0
58 TraesCS6B01G098700 chr4D 85.714 217 26 5 414 628 97494711 97494498 1.230000e-54 224.0
59 TraesCS6B01G098700 chr7D 83.730 252 32 9 414 661 89869751 89869997 2.640000e-56 230.0
60 TraesCS6B01G098700 chr7D 86.503 163 19 3 268 429 92310138 92310298 3.480000e-40 176.0
61 TraesCS6B01G098700 chr7D 87.500 152 17 2 268 418 85568969 85569119 1.250000e-39 174.0
62 TraesCS6B01G098700 chr5D 87.500 192 24 0 2108 2299 387092244 387092053 4.410000e-54 222.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G098700 chr6B 76215206 76218603 3397 True 6276.0 6276 100.0000 1 3398 1 chr6B.!!$R1 3397
1 TraesCS6B01G098700 chr6B 705177028 705177600 572 False 953.0 953 96.6840 2826 3398 1 chr6B.!!$F7 572
2 TraesCS6B01G098700 chr6A 40579361 40581726 2365 True 605.0 1840 89.4105 733 2498 4 chr6A.!!$R1 1765
3 TraesCS6B01G098700 chr7A 540868424 540868997 573 False 955.0 955 96.6900 2825 3398 1 chr7A.!!$F1 573
4 TraesCS6B01G098700 chr2B 733998330 733998905 575 True 942.0 942 96.1810 2823 3398 1 chr2B.!!$R2 575
5 TraesCS6B01G098700 chr5B 614364349 614364920 571 True 941.0 941 96.3350 2826 3398 1 chr5B.!!$R2 572
6 TraesCS6B01G098700 chr5B 403154351 403154920 569 True 931.0 931 96.1470 2828 3398 1 chr5B.!!$R1 570
7 TraesCS6B01G098700 chr1B 532153503 532154075 572 True 941.0 941 96.3350 2827 3398 1 chr1B.!!$R1 571
8 TraesCS6B01G098700 chr1B 658438767 658439918 1151 False 360.5 490 86.7155 1102 2350 2 chr1B.!!$F4 1248
9 TraesCS6B01G098700 chr1B 658189531 658190802 1271 False 288.5 355 82.9445 1108 2495 2 chr1B.!!$F3 1387
10 TraesCS6B01G098700 chrUn 2576270 2576840 570 False 939.0 939 96.3220 2828 3398 1 chrUn.!!$F1 570
11 TraesCS6B01G098700 chr7B 548371913 548372488 575 True 931.0 931 95.8410 2822 3398 1 chr7B.!!$R1 576
12 TraesCS6B01G098700 chr7B 106591127 106592061 934 False 350.5 468 96.5120 1 414 2 chr7B.!!$F1 413
13 TraesCS6B01G098700 chr4A 668795281 668795860 579 False 931.0 931 95.6900 2820 3398 1 chr4A.!!$F2 578
14 TraesCS6B01G098700 chr1D 473518103 473519218 1115 False 372.5 512 87.1445 1102 2350 2 chr1D.!!$F4 1248
15 TraesCS6B01G098700 chr1D 473337654 473338760 1106 False 260.0 320 82.6390 1108 2355 2 chr1D.!!$F3 1247
16 TraesCS6B01G098700 chr1A 567598598 567599749 1151 False 374.5 510 87.3585 1102 2350 2 chr1A.!!$F1 1248

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
571 1093 0.033504 TCGAGGGAGAAACAGTGTGC 59.966 55.0 0.0 0.0 0.00 4.57 F
1481 2022 0.039527 GCGGCTTGTGTTTACCAAGG 60.040 55.0 0.0 0.0 39.72 3.61 F
1591 2174 1.792757 TTCCCCAGCAGCAATGGACT 61.793 55.0 2.1 0.0 40.51 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2262 2872 0.028110 GGATTTCGTCCATCGCTTGC 59.972 55.0 0.00 0.0 46.96 4.01 R
2284 2894 0.034863 GGGTTCTGGAACGCCCATAA 60.035 55.0 16.33 0.0 45.57 1.90 R
2558 3204 0.107654 GCCCAGCCTTACTACACCAG 60.108 60.0 0.00 0.0 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.778299 CGGGATTCTTTCTTGACCACA 58.222 47.619 0.00 0.00 0.00 4.17
44 45 4.598022 TGACCACATCATCAATAAAGCCA 58.402 39.130 0.00 0.00 29.99 4.75
170 171 3.744238 TGTTGTTCGACCAATCTCTCA 57.256 42.857 0.00 0.00 0.00 3.27
213 214 3.447229 TCACTTCTCTCGGTATGCATGAA 59.553 43.478 10.16 1.19 0.00 2.57
220 221 4.832248 TCTCGGTATGCATGAAGAACTTT 58.168 39.130 10.16 0.00 0.00 2.66
278 800 3.998672 GTCGAGGGCCACGTGGAA 61.999 66.667 38.30 12.05 37.39 3.53
297 819 2.590092 CCCATCTGTCCCGGTTCC 59.410 66.667 0.00 0.00 0.00 3.62
299 821 0.689745 CCCATCTGTCCCGGTTCCTA 60.690 60.000 0.00 0.00 0.00 2.94
306 828 4.553678 TCTGTCCCGGTTCCTATTAGAAT 58.446 43.478 0.00 0.00 0.00 2.40
323 845 7.909485 ATTAGAATCGGGACTAAAGGTCTAA 57.091 36.000 0.00 0.00 43.97 2.10
380 902 1.595093 CGGGACAAAATGCCCTCACC 61.595 60.000 0.00 0.00 42.40 4.02
414 936 9.330220 ACTAATAGGGGTTTTTCTACTAGTGAA 57.670 33.333 5.39 4.72 30.43 3.18
417 939 9.871175 AATAGGGGTTTTTCTACTAGTGAAAAA 57.129 29.630 25.49 25.49 45.36 1.94
435 957 3.756933 AAAACATGGCAAATGACAGCT 57.243 38.095 5.69 0.00 35.91 4.24
436 958 3.756933 AAACATGGCAAATGACAGCTT 57.243 38.095 5.69 0.00 35.91 3.74
437 959 2.736144 ACATGGCAAATGACAGCTTG 57.264 45.000 5.69 0.00 35.91 4.01
438 960 1.274167 ACATGGCAAATGACAGCTTGG 59.726 47.619 5.69 0.00 35.91 3.61
439 961 1.546923 CATGGCAAATGACAGCTTGGA 59.453 47.619 0.00 0.00 35.91 3.53
440 962 1.927487 TGGCAAATGACAGCTTGGAT 58.073 45.000 0.00 0.00 0.00 3.41
441 963 1.546923 TGGCAAATGACAGCTTGGATG 59.453 47.619 0.00 0.00 0.00 3.51
442 964 1.547372 GGCAAATGACAGCTTGGATGT 59.453 47.619 0.00 0.00 0.00 3.06
443 965 2.602878 GCAAATGACAGCTTGGATGTG 58.397 47.619 0.00 0.00 0.00 3.21
444 966 2.673043 GCAAATGACAGCTTGGATGTGG 60.673 50.000 0.00 0.00 0.00 4.17
445 967 1.843368 AATGACAGCTTGGATGTGGG 58.157 50.000 0.00 0.00 0.00 4.61
446 968 0.994247 ATGACAGCTTGGATGTGGGA 59.006 50.000 0.00 0.00 0.00 4.37
447 969 0.325933 TGACAGCTTGGATGTGGGAG 59.674 55.000 0.00 0.00 0.00 4.30
448 970 0.615331 GACAGCTTGGATGTGGGAGA 59.385 55.000 0.00 0.00 0.00 3.71
449 971 0.617413 ACAGCTTGGATGTGGGAGAG 59.383 55.000 0.00 0.00 0.00 3.20
450 972 0.617413 CAGCTTGGATGTGGGAGAGT 59.383 55.000 0.00 0.00 0.00 3.24
451 973 0.617413 AGCTTGGATGTGGGAGAGTG 59.383 55.000 0.00 0.00 0.00 3.51
452 974 0.393537 GCTTGGATGTGGGAGAGTGG 60.394 60.000 0.00 0.00 0.00 4.00
453 975 0.254178 CTTGGATGTGGGAGAGTGGG 59.746 60.000 0.00 0.00 0.00 4.61
454 976 0.178876 TTGGATGTGGGAGAGTGGGA 60.179 55.000 0.00 0.00 0.00 4.37
455 977 0.178876 TGGATGTGGGAGAGTGGGAA 60.179 55.000 0.00 0.00 0.00 3.97
456 978 0.991920 GGATGTGGGAGAGTGGGAAA 59.008 55.000 0.00 0.00 0.00 3.13
457 979 1.354368 GGATGTGGGAGAGTGGGAAAA 59.646 52.381 0.00 0.00 0.00 2.29
458 980 2.024941 GGATGTGGGAGAGTGGGAAAAT 60.025 50.000 0.00 0.00 0.00 1.82
459 981 2.584835 TGTGGGAGAGTGGGAAAATG 57.415 50.000 0.00 0.00 0.00 2.32
460 982 1.075374 TGTGGGAGAGTGGGAAAATGG 59.925 52.381 0.00 0.00 0.00 3.16
461 983 0.704076 TGGGAGAGTGGGAAAATGGG 59.296 55.000 0.00 0.00 0.00 4.00
462 984 0.684479 GGGAGAGTGGGAAAATGGGC 60.684 60.000 0.00 0.00 0.00 5.36
463 985 0.039618 GGAGAGTGGGAAAATGGGCA 59.960 55.000 0.00 0.00 0.00 5.36
464 986 1.467920 GAGAGTGGGAAAATGGGCAG 58.532 55.000 0.00 0.00 0.00 4.85
465 987 0.779997 AGAGTGGGAAAATGGGCAGT 59.220 50.000 0.00 0.00 0.00 4.40
466 988 1.177401 GAGTGGGAAAATGGGCAGTC 58.823 55.000 0.00 0.00 0.00 3.51
467 989 0.609131 AGTGGGAAAATGGGCAGTCG 60.609 55.000 0.00 0.00 0.00 4.18
468 990 0.893727 GTGGGAAAATGGGCAGTCGT 60.894 55.000 0.00 0.00 0.00 4.34
469 991 0.893270 TGGGAAAATGGGCAGTCGTG 60.893 55.000 0.00 0.00 0.00 4.35
470 992 1.595093 GGGAAAATGGGCAGTCGTGG 61.595 60.000 0.00 0.00 0.00 4.94
471 993 0.608035 GGAAAATGGGCAGTCGTGGA 60.608 55.000 0.00 0.00 0.00 4.02
472 994 1.243902 GAAAATGGGCAGTCGTGGAA 58.756 50.000 0.00 0.00 0.00 3.53
473 995 1.200020 GAAAATGGGCAGTCGTGGAAG 59.800 52.381 0.00 0.00 0.00 3.46
474 996 0.400213 AAATGGGCAGTCGTGGAAGA 59.600 50.000 0.00 0.00 0.00 2.87
475 997 0.620556 AATGGGCAGTCGTGGAAGAT 59.379 50.000 0.00 0.00 0.00 2.40
476 998 0.107508 ATGGGCAGTCGTGGAAGATG 60.108 55.000 0.00 0.00 0.00 2.90
477 999 1.450312 GGGCAGTCGTGGAAGATGG 60.450 63.158 0.00 0.00 0.00 3.51
478 1000 1.450312 GGCAGTCGTGGAAGATGGG 60.450 63.158 0.00 0.00 0.00 4.00
479 1001 1.450312 GCAGTCGTGGAAGATGGGG 60.450 63.158 0.00 0.00 0.00 4.96
480 1002 1.899437 GCAGTCGTGGAAGATGGGGA 61.899 60.000 0.00 0.00 0.00 4.81
481 1003 0.613260 CAGTCGTGGAAGATGGGGAA 59.387 55.000 0.00 0.00 0.00 3.97
482 1004 0.613777 AGTCGTGGAAGATGGGGAAC 59.386 55.000 0.00 0.00 0.00 3.62
483 1005 0.323629 GTCGTGGAAGATGGGGAACA 59.676 55.000 0.00 0.00 0.00 3.18
484 1006 0.613260 TCGTGGAAGATGGGGAACAG 59.387 55.000 0.00 0.00 0.00 3.16
485 1007 0.613260 CGTGGAAGATGGGGAACAGA 59.387 55.000 0.00 0.00 0.00 3.41
486 1008 1.003118 CGTGGAAGATGGGGAACAGAA 59.997 52.381 0.00 0.00 0.00 3.02
487 1009 2.716217 GTGGAAGATGGGGAACAGAAG 58.284 52.381 0.00 0.00 0.00 2.85
488 1010 2.040412 GTGGAAGATGGGGAACAGAAGT 59.960 50.000 0.00 0.00 0.00 3.01
489 1011 2.305927 TGGAAGATGGGGAACAGAAGTC 59.694 50.000 0.00 0.00 0.00 3.01
490 1012 2.622436 GAAGATGGGGAACAGAAGTCG 58.378 52.381 0.00 0.00 0.00 4.18
491 1013 1.645710 AGATGGGGAACAGAAGTCGT 58.354 50.000 0.00 0.00 0.00 4.34
492 1014 1.276421 AGATGGGGAACAGAAGTCGTG 59.724 52.381 0.00 0.00 0.00 4.35
493 1015 0.321653 ATGGGGAACAGAAGTCGTGC 60.322 55.000 0.00 0.00 0.00 5.34
494 1016 2.027625 GGGGAACAGAAGTCGTGCG 61.028 63.158 0.00 0.00 0.00 5.34
495 1017 2.668280 GGGAACAGAAGTCGTGCGC 61.668 63.158 0.00 0.00 0.00 6.09
496 1018 2.465920 GAACAGAAGTCGTGCGCG 59.534 61.111 14.79 14.79 39.92 6.86
497 1019 3.615562 GAACAGAAGTCGTGCGCGC 62.616 63.158 27.26 27.26 38.14 6.86
530 1052 3.712881 GCAGTTCCACCGCACGTC 61.713 66.667 0.00 0.00 0.00 4.34
531 1053 3.041940 CAGTTCCACCGCACGTCC 61.042 66.667 0.00 0.00 0.00 4.79
532 1054 4.309950 AGTTCCACCGCACGTCCC 62.310 66.667 0.00 0.00 0.00 4.46
550 1072 4.373116 GGCTCGCAACCGGTCTCA 62.373 66.667 8.04 0.00 34.56 3.27
551 1073 2.125512 GCTCGCAACCGGTCTCAT 60.126 61.111 8.04 0.00 34.56 2.90
552 1074 1.741770 GCTCGCAACCGGTCTCATT 60.742 57.895 8.04 0.00 34.56 2.57
553 1075 1.696832 GCTCGCAACCGGTCTCATTC 61.697 60.000 8.04 0.00 34.56 2.67
554 1076 1.413767 CTCGCAACCGGTCTCATTCG 61.414 60.000 8.04 0.00 34.56 3.34
555 1077 1.445410 CGCAACCGGTCTCATTCGA 60.445 57.895 8.04 0.00 0.00 3.71
556 1078 1.413767 CGCAACCGGTCTCATTCGAG 61.414 60.000 8.04 0.00 40.98 4.04
557 1079 1.084370 GCAACCGGTCTCATTCGAGG 61.084 60.000 8.04 0.00 39.95 4.63
558 1080 0.460284 CAACCGGTCTCATTCGAGGG 60.460 60.000 8.04 0.00 39.95 4.30
559 1081 0.613853 AACCGGTCTCATTCGAGGGA 60.614 55.000 8.04 0.00 39.95 4.20
560 1082 1.038130 ACCGGTCTCATTCGAGGGAG 61.038 60.000 0.00 8.64 39.95 4.30
561 1083 0.752009 CCGGTCTCATTCGAGGGAGA 60.752 60.000 12.48 12.48 39.95 3.71
562 1084 1.103803 CGGTCTCATTCGAGGGAGAA 58.896 55.000 16.68 2.83 41.48 2.87
563 1085 1.476891 CGGTCTCATTCGAGGGAGAAA 59.523 52.381 16.68 0.00 41.48 2.52
564 1086 2.735762 CGGTCTCATTCGAGGGAGAAAC 60.736 54.545 16.68 12.62 41.48 2.78
565 1087 2.233922 GGTCTCATTCGAGGGAGAAACA 59.766 50.000 16.68 0.00 41.48 2.83
566 1088 3.516615 GTCTCATTCGAGGGAGAAACAG 58.483 50.000 16.68 0.00 41.48 3.16
567 1089 3.056465 GTCTCATTCGAGGGAGAAACAGT 60.056 47.826 16.68 0.00 41.48 3.55
568 1090 3.056536 TCTCATTCGAGGGAGAAACAGTG 60.057 47.826 13.72 0.00 39.95 3.66
569 1091 2.632996 TCATTCGAGGGAGAAACAGTGT 59.367 45.455 0.00 0.00 33.43 3.55
570 1092 2.526304 TTCGAGGGAGAAACAGTGTG 57.474 50.000 0.00 0.00 0.00 3.82
571 1093 0.033504 TCGAGGGAGAAACAGTGTGC 59.966 55.000 0.00 0.00 0.00 4.57
572 1094 1.284982 CGAGGGAGAAACAGTGTGCG 61.285 60.000 0.00 0.00 0.00 5.34
573 1095 0.951040 GAGGGAGAAACAGTGTGCGG 60.951 60.000 0.00 0.00 0.00 5.69
574 1096 2.617274 GGGAGAAACAGTGTGCGGC 61.617 63.158 0.00 0.00 0.00 6.53
575 1097 2.551270 GAGAAACAGTGTGCGGCG 59.449 61.111 0.51 0.51 0.00 6.46
576 1098 1.954146 GAGAAACAGTGTGCGGCGA 60.954 57.895 12.98 0.00 0.00 5.54
577 1099 1.495584 GAGAAACAGTGTGCGGCGAA 61.496 55.000 12.98 0.00 0.00 4.70
578 1100 1.368850 GAAACAGTGTGCGGCGAAC 60.369 57.895 12.09 12.09 0.00 3.95
579 1101 1.772063 GAAACAGTGTGCGGCGAACT 61.772 55.000 20.38 11.84 0.00 3.01
580 1102 0.531090 AAACAGTGTGCGGCGAACTA 60.531 50.000 20.38 2.59 0.00 2.24
581 1103 1.219522 AACAGTGTGCGGCGAACTAC 61.220 55.000 20.38 15.07 0.00 2.73
582 1104 2.048503 AGTGTGCGGCGAACTACC 60.049 61.111 20.38 7.17 0.00 3.18
583 1105 2.048503 GTGTGCGGCGAACTACCT 60.049 61.111 20.38 0.00 0.00 3.08
584 1106 1.213537 GTGTGCGGCGAACTACCTA 59.786 57.895 20.38 0.00 0.00 3.08
585 1107 1.074872 GTGTGCGGCGAACTACCTAC 61.075 60.000 20.38 4.49 0.00 3.18
586 1108 1.213537 GTGCGGCGAACTACCTACA 59.786 57.895 12.98 0.00 0.00 2.74
587 1109 0.179119 GTGCGGCGAACTACCTACAT 60.179 55.000 12.98 0.00 0.00 2.29
588 1110 1.066002 GTGCGGCGAACTACCTACATA 59.934 52.381 12.98 0.00 0.00 2.29
589 1111 1.066002 TGCGGCGAACTACCTACATAC 59.934 52.381 12.98 0.00 0.00 2.39
590 1112 1.601412 GCGGCGAACTACCTACATACC 60.601 57.143 12.98 0.00 0.00 2.73
591 1113 1.677576 CGGCGAACTACCTACATACCA 59.322 52.381 0.00 0.00 0.00 3.25
592 1114 2.542411 CGGCGAACTACCTACATACCAC 60.542 54.545 0.00 0.00 0.00 4.16
593 1115 2.428171 GGCGAACTACCTACATACCACA 59.572 50.000 0.00 0.00 0.00 4.17
594 1116 3.442100 GCGAACTACCTACATACCACAC 58.558 50.000 0.00 0.00 0.00 3.82
595 1117 3.119388 GCGAACTACCTACATACCACACA 60.119 47.826 0.00 0.00 0.00 3.72
596 1118 4.418392 CGAACTACCTACATACCACACAC 58.582 47.826 0.00 0.00 0.00 3.82
597 1119 4.082625 CGAACTACCTACATACCACACACA 60.083 45.833 0.00 0.00 0.00 3.72
598 1120 4.796038 ACTACCTACATACCACACACAC 57.204 45.455 0.00 0.00 0.00 3.82
599 1121 3.512724 ACTACCTACATACCACACACACC 59.487 47.826 0.00 0.00 0.00 4.16
600 1122 1.274167 ACCTACATACCACACACACCG 59.726 52.381 0.00 0.00 0.00 4.94
601 1123 1.404986 CCTACATACCACACACACCGG 60.405 57.143 0.00 0.00 0.00 5.28
602 1124 0.609151 TACATACCACACACACCGGG 59.391 55.000 6.32 0.00 0.00 5.73
603 1125 2.038269 CATACCACACACACCGGGC 61.038 63.158 6.32 0.00 0.00 6.13
604 1126 2.221299 ATACCACACACACCGGGCT 61.221 57.895 6.32 0.00 0.00 5.19
605 1127 1.774894 ATACCACACACACCGGGCTT 61.775 55.000 6.32 0.00 0.00 4.35
606 1128 2.668185 TACCACACACACCGGGCTTG 62.668 60.000 6.32 1.40 0.00 4.01
607 1129 2.515991 CACACACACCGGGCTTGT 60.516 61.111 6.32 2.16 0.00 3.16
608 1130 2.203153 ACACACACCGGGCTTGTC 60.203 61.111 6.32 0.00 0.00 3.18
609 1131 2.978010 CACACACCGGGCTTGTCC 60.978 66.667 6.32 0.00 0.00 4.02
610 1132 3.168528 ACACACCGGGCTTGTCCT 61.169 61.111 6.32 0.00 34.39 3.85
611 1133 1.839747 ACACACCGGGCTTGTCCTA 60.840 57.895 6.32 0.00 34.39 2.94
612 1134 1.375523 CACACCGGGCTTGTCCTAC 60.376 63.158 6.32 0.00 34.39 3.18
613 1135 2.125673 CACCGGGCTTGTCCTACG 60.126 66.667 6.32 0.00 34.39 3.51
614 1136 2.602568 ACCGGGCTTGTCCTACGT 60.603 61.111 6.32 0.00 34.39 3.57
615 1137 1.304381 ACCGGGCTTGTCCTACGTA 60.304 57.895 6.32 0.00 34.39 3.57
616 1138 0.899717 ACCGGGCTTGTCCTACGTAA 60.900 55.000 6.32 0.00 34.39 3.18
617 1139 0.459063 CCGGGCTTGTCCTACGTAAC 60.459 60.000 0.00 0.00 34.39 2.50
618 1140 0.244450 CGGGCTTGTCCTACGTAACA 59.756 55.000 0.00 0.00 34.39 2.41
619 1141 1.718396 GGGCTTGTCCTACGTAACAC 58.282 55.000 0.00 0.00 34.39 3.32
620 1142 1.001181 GGGCTTGTCCTACGTAACACA 59.999 52.381 0.00 1.29 34.39 3.72
621 1143 2.548493 GGGCTTGTCCTACGTAACACAA 60.548 50.000 14.95 14.95 34.39 3.33
622 1144 3.332034 GGCTTGTCCTACGTAACACAAT 58.668 45.455 15.73 0.00 0.00 2.71
623 1145 4.497300 GGCTTGTCCTACGTAACACAATA 58.503 43.478 15.73 0.57 0.00 1.90
624 1146 4.931002 GGCTTGTCCTACGTAACACAATAA 59.069 41.667 15.73 0.01 0.00 1.40
625 1147 5.409214 GGCTTGTCCTACGTAACACAATAAA 59.591 40.000 15.73 0.00 0.00 1.40
626 1148 6.093082 GGCTTGTCCTACGTAACACAATAAAT 59.907 38.462 15.73 0.00 0.00 1.40
627 1149 7.178074 GCTTGTCCTACGTAACACAATAAATC 58.822 38.462 15.73 4.43 0.00 2.17
628 1150 7.599630 TTGTCCTACGTAACACAATAAATCC 57.400 36.000 12.73 0.00 0.00 3.01
629 1151 6.699366 TGTCCTACGTAACACAATAAATCCA 58.301 36.000 0.00 0.00 0.00 3.41
630 1152 7.332557 TGTCCTACGTAACACAATAAATCCAT 58.667 34.615 0.00 0.00 0.00 3.41
631 1153 7.825270 TGTCCTACGTAACACAATAAATCCATT 59.175 33.333 0.00 0.00 0.00 3.16
632 1154 8.671028 GTCCTACGTAACACAATAAATCCATTT 58.329 33.333 0.00 0.00 0.00 2.32
633 1155 9.233649 TCCTACGTAACACAATAAATCCATTTT 57.766 29.630 0.00 0.00 0.00 1.82
634 1156 9.849166 CCTACGTAACACAATAAATCCATTTTT 57.151 29.630 0.00 0.00 0.00 1.94
653 1175 3.454042 TTTGATGTCAAGATTCGTGCG 57.546 42.857 0.00 0.00 37.15 5.34
654 1176 2.362169 TGATGTCAAGATTCGTGCGA 57.638 45.000 0.00 0.00 0.00 5.10
655 1177 2.682836 TGATGTCAAGATTCGTGCGAA 58.317 42.857 9.50 9.50 38.59 4.70
656 1178 3.063485 TGATGTCAAGATTCGTGCGAAA 58.937 40.909 11.09 0.00 37.69 3.46
657 1179 3.496507 TGATGTCAAGATTCGTGCGAAAA 59.503 39.130 11.09 0.00 37.69 2.29
658 1180 3.953874 TGTCAAGATTCGTGCGAAAAA 57.046 38.095 11.09 0.00 37.69 1.94
659 1181 3.613563 TGTCAAGATTCGTGCGAAAAAC 58.386 40.909 11.09 6.33 37.69 2.43
660 1182 3.064134 TGTCAAGATTCGTGCGAAAAACA 59.936 39.130 11.09 8.30 37.69 2.83
661 1183 4.032355 GTCAAGATTCGTGCGAAAAACAA 58.968 39.130 11.09 0.00 37.69 2.83
662 1184 4.032355 TCAAGATTCGTGCGAAAAACAAC 58.968 39.130 11.09 0.54 37.69 3.32
663 1185 2.994849 AGATTCGTGCGAAAAACAACC 58.005 42.857 11.09 0.00 37.69 3.77
664 1186 2.356382 AGATTCGTGCGAAAAACAACCA 59.644 40.909 11.09 0.00 37.69 3.67
665 1187 2.631418 TTCGTGCGAAAAACAACCAA 57.369 40.000 4.43 0.00 0.00 3.67
666 1188 1.897641 TCGTGCGAAAAACAACCAAC 58.102 45.000 0.00 0.00 0.00 3.77
667 1189 0.563857 CGTGCGAAAAACAACCAACG 59.436 50.000 0.00 0.00 0.00 4.10
668 1190 1.790838 CGTGCGAAAAACAACCAACGA 60.791 47.619 0.00 0.00 0.00 3.85
669 1191 1.580256 GTGCGAAAAACAACCAACGAC 59.420 47.619 0.00 0.00 0.00 4.34
670 1192 0.835120 GCGAAAAACAACCAACGACG 59.165 50.000 0.00 0.00 0.00 5.12
671 1193 1.529418 GCGAAAAACAACCAACGACGA 60.529 47.619 0.00 0.00 0.00 4.20
672 1194 2.851764 GCGAAAAACAACCAACGACGAT 60.852 45.455 0.00 0.00 0.00 3.73
673 1195 3.356145 CGAAAAACAACCAACGACGATT 58.644 40.909 0.00 0.00 0.00 3.34
674 1196 3.416352 CGAAAAACAACCAACGACGATTC 59.584 43.478 0.00 0.00 0.00 2.52
675 1197 4.344448 GAAAAACAACCAACGACGATTCA 58.656 39.130 0.00 0.00 0.00 2.57
676 1198 4.561735 AAAACAACCAACGACGATTCAT 57.438 36.364 0.00 0.00 0.00 2.57
677 1199 3.536158 AACAACCAACGACGATTCATG 57.464 42.857 0.00 0.00 0.00 3.07
678 1200 1.196808 ACAACCAACGACGATTCATGC 59.803 47.619 0.00 0.00 0.00 4.06
679 1201 0.442310 AACCAACGACGATTCATGCG 59.558 50.000 0.00 0.00 0.00 4.73
680 1202 0.669318 ACCAACGACGATTCATGCGT 60.669 50.000 0.00 0.00 45.79 5.24
681 1203 0.247262 CCAACGACGATTCATGCGTG 60.247 55.000 0.00 0.00 42.77 5.34
682 1204 0.438445 CAACGACGATTCATGCGTGT 59.562 50.000 5.68 0.00 42.77 4.49
683 1205 0.438445 AACGACGATTCATGCGTGTG 59.562 50.000 5.68 0.00 42.77 3.82
684 1206 1.344837 CGACGATTCATGCGTGTGG 59.655 57.895 5.68 0.00 42.77 4.17
685 1207 1.075979 CGACGATTCATGCGTGTGGA 61.076 55.000 5.68 0.00 42.77 4.02
686 1208 0.370273 GACGATTCATGCGTGTGGAC 59.630 55.000 5.68 0.00 42.77 4.02
700 1222 4.048820 GTGTGGACGAATTAAAGACGTG 57.951 45.455 0.00 0.00 40.29 4.49
701 1223 2.477375 TGTGGACGAATTAAAGACGTGC 59.523 45.455 13.53 13.53 45.46 5.34
702 1224 2.070783 TGGACGAATTAAAGACGTGCC 58.929 47.619 16.12 13.09 44.87 5.01
703 1225 2.070783 GGACGAATTAAAGACGTGCCA 58.929 47.619 0.00 0.00 41.09 4.92
704 1226 2.159747 GGACGAATTAAAGACGTGCCAC 60.160 50.000 0.00 0.00 41.09 5.01
705 1227 2.477375 GACGAATTAAAGACGTGCCACA 59.523 45.455 0.00 0.00 40.29 4.17
706 1228 2.222445 ACGAATTAAAGACGTGCCACAC 59.778 45.455 0.00 0.00 38.79 3.82
721 1243 4.579384 CACGTGTGGGTGGGCCTT 62.579 66.667 7.58 0.00 34.27 4.35
722 1244 2.850130 ACGTGTGGGTGGGCCTTA 60.850 61.111 4.53 0.00 34.45 2.69
723 1245 2.046314 CGTGTGGGTGGGCCTTAG 60.046 66.667 4.53 0.00 34.45 2.18
724 1246 2.890766 CGTGTGGGTGGGCCTTAGT 61.891 63.158 4.53 0.00 34.45 2.24
725 1247 1.303317 GTGTGGGTGGGCCTTAGTG 60.303 63.158 4.53 0.00 34.45 2.74
726 1248 1.772567 TGTGGGTGGGCCTTAGTGT 60.773 57.895 4.53 0.00 34.45 3.55
727 1249 1.357272 TGTGGGTGGGCCTTAGTGTT 61.357 55.000 4.53 0.00 34.45 3.32
728 1250 0.178973 GTGGGTGGGCCTTAGTGTTT 60.179 55.000 4.53 0.00 34.45 2.83
729 1251 0.111639 TGGGTGGGCCTTAGTGTTTC 59.888 55.000 4.53 0.00 34.45 2.78
730 1252 0.958876 GGGTGGGCCTTAGTGTTTCG 60.959 60.000 4.53 0.00 34.45 3.46
731 1253 0.958876 GGTGGGCCTTAGTGTTTCGG 60.959 60.000 4.53 0.00 0.00 4.30
750 1272 3.056393 TCGGAAATTTTACTCCAGCTCGA 60.056 43.478 0.00 0.00 0.00 4.04
751 1273 3.871594 CGGAAATTTTACTCCAGCTCGAT 59.128 43.478 0.00 0.00 0.00 3.59
752 1274 4.025647 CGGAAATTTTACTCCAGCTCGATC 60.026 45.833 0.00 0.00 0.00 3.69
753 1275 4.025647 GGAAATTTTACTCCAGCTCGATCG 60.026 45.833 9.36 9.36 0.00 3.69
754 1276 2.579207 TTTTACTCCAGCTCGATCGG 57.421 50.000 16.41 7.26 0.00 4.18
755 1277 1.758936 TTTACTCCAGCTCGATCGGA 58.241 50.000 16.41 2.91 0.00 4.55
756 1278 1.982660 TTACTCCAGCTCGATCGGAT 58.017 50.000 16.41 1.49 0.00 4.18
757 1279 1.982660 TACTCCAGCTCGATCGGATT 58.017 50.000 16.41 0.95 0.00 3.01
758 1280 1.982660 ACTCCAGCTCGATCGGATTA 58.017 50.000 16.41 0.00 0.00 1.75
759 1281 1.609555 ACTCCAGCTCGATCGGATTAC 59.390 52.381 16.41 0.51 0.00 1.89
760 1282 1.609072 CTCCAGCTCGATCGGATTACA 59.391 52.381 16.41 0.00 0.00 2.41
775 1297 2.232756 TTACAACTTCTCGCAGCACA 57.767 45.000 0.00 0.00 0.00 4.57
790 1316 2.080693 AGCACAAACACTTGAACACGA 58.919 42.857 0.00 0.00 36.33 4.35
791 1317 2.095853 AGCACAAACACTTGAACACGAG 59.904 45.455 0.00 0.00 36.33 4.18
805 1331 4.477975 CGAGCGGGAGACGGACAC 62.478 72.222 0.00 0.00 44.51 3.67
808 1334 4.436998 GCGGGAGACGGACACCAG 62.437 72.222 0.00 0.00 44.51 4.00
815 1341 2.597805 ACGGACACCAGCGAGTCT 60.598 61.111 0.00 0.00 35.18 3.24
849 1375 4.160252 CCAAATGGGAATCCGAGTTCATTT 59.840 41.667 7.37 7.37 40.01 2.32
862 1388 2.030007 AGTTCATTTTGCACACGGATGG 60.030 45.455 0.00 0.00 0.00 3.51
864 1390 1.072116 CATTTTGCACACGGATGGCG 61.072 55.000 0.00 0.00 0.00 5.69
865 1391 1.523154 ATTTTGCACACGGATGGCGT 61.523 50.000 0.00 0.00 0.00 5.68
866 1392 0.885150 TTTTGCACACGGATGGCGTA 60.885 50.000 0.00 0.00 0.00 4.42
867 1393 1.570347 TTTGCACACGGATGGCGTAC 61.570 55.000 0.00 0.00 0.00 3.67
868 1394 3.550992 GCACACGGATGGCGTACG 61.551 66.667 11.84 11.84 41.06 3.67
873 1399 4.126164 CGGATGGCGTACGTATCG 57.874 61.111 17.90 10.16 0.00 2.92
880 1406 2.724721 CGTACGTATCGCAGGCGG 60.725 66.667 14.24 0.00 40.25 6.13
881 1407 2.410469 GTACGTATCGCAGGCGGT 59.590 61.111 14.24 9.54 40.25 5.68
882 1408 1.648720 GTACGTATCGCAGGCGGTA 59.351 57.895 14.24 8.35 40.25 4.02
883 1409 0.239347 GTACGTATCGCAGGCGGTAT 59.761 55.000 14.24 3.50 37.37 2.73
884 1410 0.518636 TACGTATCGCAGGCGGTATC 59.481 55.000 14.24 5.33 37.37 2.24
885 1411 1.443872 CGTATCGCAGGCGGTATCC 60.444 63.158 14.24 0.00 37.37 2.59
886 1412 1.080025 GTATCGCAGGCGGTATCCC 60.080 63.158 14.24 0.00 37.37 3.85
896 1422 2.416260 GGTATCCCGTCGCCTGAC 59.584 66.667 0.00 0.00 41.91 3.51
897 1423 2.125961 GGTATCCCGTCGCCTGACT 61.126 63.158 0.00 0.00 43.21 3.41
898 1424 1.359475 GTATCCCGTCGCCTGACTC 59.641 63.158 0.00 0.00 43.21 3.36
899 1425 1.102222 GTATCCCGTCGCCTGACTCT 61.102 60.000 0.00 0.00 43.21 3.24
900 1426 0.471191 TATCCCGTCGCCTGACTCTA 59.529 55.000 0.00 0.00 43.21 2.43
901 1427 0.178987 ATCCCGTCGCCTGACTCTAT 60.179 55.000 0.00 0.00 43.21 1.98
902 1428 0.395311 TCCCGTCGCCTGACTCTATT 60.395 55.000 0.00 0.00 43.21 1.73
903 1429 0.249073 CCCGTCGCCTGACTCTATTG 60.249 60.000 0.00 0.00 43.21 1.90
904 1430 0.249073 CCGTCGCCTGACTCTATTGG 60.249 60.000 0.00 0.00 43.21 3.16
905 1431 0.872021 CGTCGCCTGACTCTATTGGC 60.872 60.000 0.00 0.00 43.21 4.52
906 1432 0.461961 GTCGCCTGACTCTATTGGCT 59.538 55.000 0.00 0.00 42.90 4.75
907 1433 0.461548 TCGCCTGACTCTATTGGCTG 59.538 55.000 0.00 0.00 42.90 4.85
908 1434 0.531532 CGCCTGACTCTATTGGCTGG 60.532 60.000 0.00 0.00 42.90 4.85
909 1435 0.833287 GCCTGACTCTATTGGCTGGA 59.167 55.000 0.00 0.00 41.92 3.86
910 1436 1.202627 GCCTGACTCTATTGGCTGGAG 60.203 57.143 0.00 0.00 41.92 3.86
912 1438 3.300388 CCTGACTCTATTGGCTGGAGTA 58.700 50.000 0.00 0.00 44.92 2.59
913 1439 3.068873 CCTGACTCTATTGGCTGGAGTAC 59.931 52.174 0.00 0.00 44.92 2.73
914 1440 3.957497 CTGACTCTATTGGCTGGAGTACT 59.043 47.826 0.00 0.00 44.92 2.73
915 1441 5.125367 TGACTCTATTGGCTGGAGTACTA 57.875 43.478 0.00 0.00 44.92 1.82
916 1442 5.706447 TGACTCTATTGGCTGGAGTACTAT 58.294 41.667 0.00 0.00 44.92 2.12
917 1443 6.849151 TGACTCTATTGGCTGGAGTACTATA 58.151 40.000 0.00 0.00 44.92 1.31
918 1444 7.471041 TGACTCTATTGGCTGGAGTACTATAT 58.529 38.462 0.00 0.00 44.92 0.86
919 1445 8.612145 TGACTCTATTGGCTGGAGTACTATATA 58.388 37.037 0.00 0.00 44.92 0.86
920 1446 9.635404 GACTCTATTGGCTGGAGTACTATATAT 57.365 37.037 0.00 0.00 44.92 0.86
921 1447 9.998752 ACTCTATTGGCTGGAGTACTATATATT 57.001 33.333 0.00 0.00 43.28 1.28
927 1453 8.951614 TGGCTGGAGTACTATATATTTACAGT 57.048 34.615 0.00 0.00 0.00 3.55
950 1476 4.946160 TTACACCCCAAGAGGAATCAAT 57.054 40.909 0.00 0.00 38.24 2.57
952 1478 2.292267 CACCCCAAGAGGAATCAATCG 58.708 52.381 0.00 0.00 38.24 3.34
956 1482 1.332997 CCAAGAGGAATCAATCGCTGC 59.667 52.381 0.00 0.00 36.89 5.25
967 1493 1.520174 CAATCGCTGCATCTACAGACG 59.480 52.381 0.00 0.00 40.25 4.18
988 1514 1.815421 GACGATCGGCATTGCACCT 60.815 57.895 18.12 0.00 0.00 4.00
989 1515 2.040213 GACGATCGGCATTGCACCTG 62.040 60.000 18.12 0.00 0.00 4.00
1020 1546 2.880879 GCGCGATCTTGCTCGACA 60.881 61.111 12.10 0.00 41.12 4.35
1024 1550 0.851495 GCGATCTTGCTCGACATCAG 59.149 55.000 0.00 0.00 41.12 2.90
1080 1606 2.417516 CGTCCGGCGGATGATCTT 59.582 61.111 38.30 0.00 40.94 2.40
1081 1607 1.951130 CGTCCGGCGGATGATCTTG 60.951 63.158 38.30 15.89 40.94 3.02
1082 1608 1.441729 GTCCGGCGGATGATCTTGA 59.558 57.895 33.54 2.26 32.73 3.02
1083 1609 0.598680 GTCCGGCGGATGATCTTGAG 60.599 60.000 33.54 0.00 32.73 3.02
1084 1610 0.755327 TCCGGCGGATGATCTTGAGA 60.755 55.000 27.46 0.00 0.00 3.27
1085 1611 0.104855 CCGGCGGATGATCTTGAGAA 59.895 55.000 24.41 0.00 0.00 2.87
1086 1612 1.473257 CCGGCGGATGATCTTGAGAAA 60.473 52.381 24.41 0.00 0.00 2.52
1087 1613 2.279741 CGGCGGATGATCTTGAGAAAA 58.720 47.619 0.00 0.00 0.00 2.29
1088 1614 2.286294 CGGCGGATGATCTTGAGAAAAG 59.714 50.000 0.00 0.00 0.00 2.27
1089 1615 2.615912 GGCGGATGATCTTGAGAAAAGG 59.384 50.000 0.00 0.00 0.00 3.11
1090 1616 2.032675 GCGGATGATCTTGAGAAAAGGC 59.967 50.000 0.00 0.00 0.00 4.35
1091 1617 3.273434 CGGATGATCTTGAGAAAAGGCA 58.727 45.455 0.00 0.00 0.00 4.75
1092 1618 3.311871 CGGATGATCTTGAGAAAAGGCAG 59.688 47.826 0.00 0.00 0.00 4.85
1093 1619 4.521146 GGATGATCTTGAGAAAAGGCAGA 58.479 43.478 0.00 0.00 0.00 4.26
1094 1620 4.575645 GGATGATCTTGAGAAAAGGCAGAG 59.424 45.833 0.00 0.00 0.00 3.35
1095 1621 3.947868 TGATCTTGAGAAAAGGCAGAGG 58.052 45.455 0.00 0.00 0.00 3.69
1096 1622 3.584406 TGATCTTGAGAAAAGGCAGAGGA 59.416 43.478 0.00 0.00 0.00 3.71
1097 1623 3.409026 TCTTGAGAAAAGGCAGAGGAC 57.591 47.619 0.00 0.00 0.00 3.85
1098 1624 2.072298 CTTGAGAAAAGGCAGAGGACG 58.928 52.381 0.00 0.00 0.00 4.79
1099 1625 0.320771 TGAGAAAAGGCAGAGGACGC 60.321 55.000 0.00 0.00 0.00 5.19
1100 1626 0.320771 GAGAAAAGGCAGAGGACGCA 60.321 55.000 0.00 0.00 0.00 5.24
1121 1647 4.995058 GGGGGTGGTGTCCCTGGA 62.995 72.222 0.00 0.00 46.27 3.86
1199 1734 4.832608 CGCCGGGGAAGTACAGCC 62.833 72.222 14.46 0.00 0.00 4.85
1262 1797 1.805945 CGCGTGACTACCTGAAGCC 60.806 63.158 0.00 0.00 0.00 4.35
1267 1802 1.142097 GACTACCTGAAGCCCTCGC 59.858 63.158 0.00 0.00 0.00 5.03
1292 1827 1.139853 GCCCTCGGATGAAGATGAACT 59.860 52.381 0.00 0.00 0.00 3.01
1293 1828 2.420687 GCCCTCGGATGAAGATGAACTT 60.421 50.000 0.00 0.00 42.03 2.66
1294 1829 3.878778 CCCTCGGATGAAGATGAACTTT 58.121 45.455 0.00 0.00 39.13 2.66
1295 1830 3.624861 CCCTCGGATGAAGATGAACTTTG 59.375 47.826 0.00 0.00 39.13 2.77
1296 1831 3.064545 CCTCGGATGAAGATGAACTTTGC 59.935 47.826 0.00 0.00 39.13 3.68
1297 1832 2.672874 TCGGATGAAGATGAACTTTGCG 59.327 45.455 0.00 0.00 39.13 4.85
1303 1838 1.160137 AGATGAACTTTGCGCAGGAC 58.840 50.000 11.31 8.45 0.00 3.85
1306 1841 0.749818 TGAACTTTGCGCAGGACCAA 60.750 50.000 11.31 0.00 0.00 3.67
1315 1850 3.047877 CAGGACCAAACGCCGACC 61.048 66.667 0.00 0.00 0.00 4.79
1351 1889 2.025155 GCTCTGTCGTCCAGGAAGATA 58.975 52.381 8.49 5.01 41.83 1.98
1389 1930 3.723348 GTGGTGGAAACGGCGCTC 61.723 66.667 6.90 3.50 0.00 5.03
1405 1946 1.141665 CTCGTGATCGTGGATGCCA 59.858 57.895 0.00 0.00 38.33 4.92
1435 1976 2.395360 GCGGCCAATGCGAACAGTA 61.395 57.895 2.24 0.00 38.85 2.74
1481 2022 0.039527 GCGGCTTGTGTTTACCAAGG 60.040 55.000 0.00 0.00 39.72 3.61
1591 2174 1.792757 TTCCCCAGCAGCAATGGACT 61.793 55.000 2.10 0.00 40.51 3.85
1720 2318 2.113774 CCACCTCAAGCAGCACCA 59.886 61.111 0.00 0.00 0.00 4.17
1721 2319 2.263741 CCACCTCAAGCAGCACCAC 61.264 63.158 0.00 0.00 0.00 4.16
1722 2320 2.113986 ACCTCAAGCAGCACCACC 59.886 61.111 0.00 0.00 0.00 4.61
1723 2321 2.113774 CCTCAAGCAGCACCACCA 59.886 61.111 0.00 0.00 0.00 4.17
1744 2342 3.003113 GCGGCACCGTTCTCTACCT 62.003 63.158 11.27 0.00 42.09 3.08
1898 2496 3.083349 CCTCCTGCCCGACCATCA 61.083 66.667 0.00 0.00 0.00 3.07
1903 2501 3.746949 CTGCCCGACCATCAGCTCC 62.747 68.421 0.00 0.00 0.00 4.70
2267 2877 3.730761 CGTGAGTGGCCTGCAAGC 61.731 66.667 3.32 0.00 0.00 4.01
2421 3063 0.033920 TCTGAATGTGTGCGCTCAGT 59.966 50.000 13.23 7.92 37.25 3.41
2434 3076 5.041287 GTGCGCTCAGTATTTCAGTGTATA 58.959 41.667 9.73 0.00 0.00 1.47
2461 3103 9.725019 TTTATATATGCAAGGACAGGTAGATTG 57.275 33.333 0.00 0.00 0.00 2.67
2467 3109 3.356529 AGGACAGGTAGATTGCTTTGG 57.643 47.619 0.00 0.00 0.00 3.28
2468 3110 1.745653 GGACAGGTAGATTGCTTTGGC 59.254 52.381 0.00 0.00 39.26 4.52
2469 3111 1.745653 GACAGGTAGATTGCTTTGGCC 59.254 52.381 0.00 0.00 37.74 5.36
2470 3112 1.075374 ACAGGTAGATTGCTTTGGCCA 59.925 47.619 0.00 0.00 37.74 5.36
2471 3113 2.291800 ACAGGTAGATTGCTTTGGCCAT 60.292 45.455 6.09 0.00 37.74 4.40
2472 3114 2.100252 CAGGTAGATTGCTTTGGCCATG 59.900 50.000 6.09 3.68 37.74 3.66
2473 3115 2.025037 AGGTAGATTGCTTTGGCCATGA 60.025 45.455 6.09 0.00 37.74 3.07
2476 3122 4.141869 GGTAGATTGCTTTGGCCATGAAAT 60.142 41.667 6.09 9.38 37.74 2.17
2478 3124 5.014808 AGATTGCTTTGGCCATGAAATAC 57.985 39.130 6.09 4.18 37.74 1.89
2485 3131 2.722094 TGGCCATGAAATACAGTCACC 58.278 47.619 0.00 0.00 0.00 4.02
2498 3144 9.499479 GAAATACAGTCACCAAGATGATATGAT 57.501 33.333 0.00 0.00 0.00 2.45
2499 3145 9.499479 AAATACAGTCACCAAGATGATATGATC 57.501 33.333 0.00 0.00 0.00 2.92
2515 3161 7.758609 TGATATGATCATATGACCCCAAAGTT 58.241 34.615 28.79 4.80 34.36 2.66
2516 3162 8.889445 TGATATGATCATATGACCCCAAAGTTA 58.111 33.333 28.79 0.00 34.36 2.24
2517 3163 9.167311 GATATGATCATATGACCCCAAAGTTAC 57.833 37.037 28.79 8.74 34.36 2.50
2519 3165 6.726379 TGATCATATGACCCCAAAGTTACAA 58.274 36.000 7.78 0.00 0.00 2.41
2520 3166 6.828273 TGATCATATGACCCCAAAGTTACAAG 59.172 38.462 7.78 0.00 0.00 3.16
2521 3167 4.947388 TCATATGACCCCAAAGTTACAAGC 59.053 41.667 0.00 0.00 0.00 4.01
2522 3168 3.525800 ATGACCCCAAAGTTACAAGCT 57.474 42.857 0.00 0.00 0.00 3.74
2523 3169 3.306472 TGACCCCAAAGTTACAAGCTT 57.694 42.857 0.00 0.00 0.00 3.74
2524 3170 3.637769 TGACCCCAAAGTTACAAGCTTT 58.362 40.909 0.00 0.00 36.70 3.51
2525 3171 3.634910 TGACCCCAAAGTTACAAGCTTTC 59.365 43.478 0.00 0.00 34.32 2.62
2526 3172 3.634910 GACCCCAAAGTTACAAGCTTTCA 59.365 43.478 0.00 0.00 34.32 2.69
2527 3173 4.223144 ACCCCAAAGTTACAAGCTTTCAT 58.777 39.130 0.00 0.00 34.32 2.57
2528 3174 4.653801 ACCCCAAAGTTACAAGCTTTCATT 59.346 37.500 0.00 0.00 34.32 2.57
2530 3176 5.453198 CCCCAAAGTTACAAGCTTTCATTGT 60.453 40.000 0.00 0.00 43.15 2.71
2531 3177 6.048509 CCCAAAGTTACAAGCTTTCATTGTT 58.951 36.000 0.00 0.00 41.08 2.83
2532 3178 6.538381 CCCAAAGTTACAAGCTTTCATTGTTT 59.462 34.615 0.00 0.00 41.08 2.83
2533 3179 7.254421 CCCAAAGTTACAAGCTTTCATTGTTTC 60.254 37.037 0.00 0.00 41.08 2.78
2534 3180 7.492344 CCAAAGTTACAAGCTTTCATTGTTTCT 59.508 33.333 0.00 0.00 41.08 2.52
2535 3181 8.872845 CAAAGTTACAAGCTTTCATTGTTTCTT 58.127 29.630 0.00 0.00 41.08 2.52
2538 3184 9.736023 AGTTACAAGCTTTCATTGTTTCTTTAG 57.264 29.630 0.00 0.00 41.08 1.85
2540 3186 6.515832 ACAAGCTTTCATTGTTTCTTTAGGG 58.484 36.000 0.00 0.00 37.61 3.53
2541 3187 5.139435 AGCTTTCATTGTTTCTTTAGGGC 57.861 39.130 0.00 0.00 0.00 5.19
2542 3188 3.920412 GCTTTCATTGTTTCTTTAGGGCG 59.080 43.478 0.00 0.00 0.00 6.13
2543 3189 4.558697 GCTTTCATTGTTTCTTTAGGGCGT 60.559 41.667 0.00 0.00 0.00 5.68
2544 3190 4.759516 TTCATTGTTTCTTTAGGGCGTC 57.240 40.909 0.00 0.00 0.00 5.19
2556 3202 2.327244 GGCGTCGCCTACTACTCG 59.673 66.667 28.98 0.00 46.69 4.18
2558 3204 1.011352 GCGTCGCCTACTACTCGTC 60.011 63.158 5.75 0.00 0.00 4.20
2561 3207 0.656785 GTCGCCTACTACTCGTCTGG 59.343 60.000 0.00 0.00 0.00 3.86
2566 3212 2.613133 GCCTACTACTCGTCTGGTGTAG 59.387 54.545 0.00 0.00 44.48 2.74
2571 3217 4.879104 CTACTCGTCTGGTGTAGTAAGG 57.121 50.000 0.00 0.00 37.74 2.69
2572 3218 1.817447 ACTCGTCTGGTGTAGTAAGGC 59.183 52.381 0.00 0.00 0.00 4.35
2574 3220 1.816835 TCGTCTGGTGTAGTAAGGCTG 59.183 52.381 0.00 0.00 0.00 4.85
2575 3221 1.135083 CGTCTGGTGTAGTAAGGCTGG 60.135 57.143 0.00 0.00 0.00 4.85
2576 3222 1.207329 GTCTGGTGTAGTAAGGCTGGG 59.793 57.143 0.00 0.00 0.00 4.45
2577 3223 0.107654 CTGGTGTAGTAAGGCTGGGC 60.108 60.000 0.00 0.00 0.00 5.36
2578 3224 0.838554 TGGTGTAGTAAGGCTGGGCA 60.839 55.000 0.00 0.00 0.00 5.36
2580 3226 0.323629 GTGTAGTAAGGCTGGGCACA 59.676 55.000 0.00 0.00 0.00 4.57
2582 3228 1.633432 TGTAGTAAGGCTGGGCACAAT 59.367 47.619 0.00 0.00 0.00 2.71
2584 3230 2.717639 AGTAAGGCTGGGCACAATAG 57.282 50.000 0.00 0.00 0.00 1.73
2586 3232 1.211949 GTAAGGCTGGGCACAATAGGA 59.788 52.381 0.00 0.00 0.00 2.94
2587 3233 0.704076 AAGGCTGGGCACAATAGGAA 59.296 50.000 0.00 0.00 0.00 3.36
2589 3235 1.288932 AGGCTGGGCACAATAGGAAAT 59.711 47.619 0.00 0.00 0.00 2.17
2590 3236 2.513738 AGGCTGGGCACAATAGGAAATA 59.486 45.455 0.00 0.00 0.00 1.40
2592 3238 3.507622 GGCTGGGCACAATAGGAAATATC 59.492 47.826 0.00 0.00 0.00 1.63
2593 3239 4.144297 GCTGGGCACAATAGGAAATATCA 58.856 43.478 0.00 0.00 0.00 2.15
2594 3240 4.768968 GCTGGGCACAATAGGAAATATCAT 59.231 41.667 0.00 0.00 0.00 2.45
2595 3241 5.336213 GCTGGGCACAATAGGAAATATCATG 60.336 44.000 0.00 0.00 0.00 3.07
2596 3242 5.704354 TGGGCACAATAGGAAATATCATGT 58.296 37.500 0.00 0.00 0.00 3.21
2597 3243 6.846988 TGGGCACAATAGGAAATATCATGTA 58.153 36.000 0.00 0.00 0.00 2.29
2598 3244 6.714810 TGGGCACAATAGGAAATATCATGTAC 59.285 38.462 0.00 0.00 0.00 2.90
2600 3246 8.100791 GGGCACAATAGGAAATATCATGTACTA 58.899 37.037 0.00 0.00 0.00 1.82
2601 3247 8.936864 GGCACAATAGGAAATATCATGTACTAC 58.063 37.037 0.00 0.00 0.00 2.73
2671 3317 9.208022 TGCACAGTATCATAACTTGATATTAGC 57.792 33.333 0.00 4.14 46.40 3.09
2672 3318 8.660373 GCACAGTATCATAACTTGATATTAGCC 58.340 37.037 0.00 0.00 46.40 3.93
2673 3319 9.935241 CACAGTATCATAACTTGATATTAGCCT 57.065 33.333 0.00 0.00 46.40 4.58
2688 3463 8.733458 TGATATTAGCCTCATTTATTGTCATGC 58.267 33.333 0.00 0.00 0.00 4.06
2749 3532 4.820775 TGATACTCAGCCCTCTATTTCCT 58.179 43.478 0.00 0.00 0.00 3.36
2754 3537 4.141528 ACTCAGCCCTCTATTTCCTCATTG 60.142 45.833 0.00 0.00 0.00 2.82
2755 3538 2.883386 CAGCCCTCTATTTCCTCATTGC 59.117 50.000 0.00 0.00 0.00 3.56
2761 3544 6.349944 GCCCTCTATTTCCTCATTGCATTATG 60.350 42.308 0.00 0.00 0.00 1.90
2764 3547 7.230108 CCTCTATTTCCTCATTGCATTATGTGT 59.770 37.037 0.00 0.00 0.00 3.72
2768 3551 3.622612 TCCTCATTGCATTATGTGTCACG 59.377 43.478 0.00 0.00 0.00 4.35
2791 3575 6.482308 ACGTAAGCAAAAATGTCTAGTTGACT 59.518 34.615 6.29 0.00 43.86 3.41
2793 3577 7.855904 CGTAAGCAAAAATGTCTAGTTGACTTT 59.144 33.333 6.29 3.49 45.54 2.66
2901 3685 2.097036 TCACGTAAGGACCGACATGAT 58.903 47.619 0.00 0.00 46.39 2.45
3059 3844 2.584835 TATGCAGCTTTGTGGACCTT 57.415 45.000 0.00 0.00 0.00 3.50
3074 3859 2.772739 CCTTCAAGGTGGCTCATCG 58.227 57.895 0.00 0.00 0.00 3.84
3192 3977 1.339727 GCGGAAGGAAACCATACCTGT 60.340 52.381 0.00 0.00 36.56 4.00
3311 4096 2.257371 CGACGCTGGAGGAAACGA 59.743 61.111 0.00 0.00 0.00 3.85
3320 4105 1.012486 GGAGGAAACGACGTCGCAAT 61.012 55.000 35.92 22.62 44.43 3.56
3322 4107 0.319211 AGGAAACGACGTCGCAATGA 60.319 50.000 35.92 0.00 44.43 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 7.520798 TGGTATTCTCTGGCTTTATTGATGAT 58.479 34.615 0.00 0.00 0.00 2.45
44 45 5.762179 TCAACTTCCACATGGTATTCTCT 57.238 39.130 0.00 0.00 36.34 3.10
129 130 8.814235 ACAACAAGTTTTCGTATTATCTATCCG 58.186 33.333 0.00 0.00 0.00 4.18
170 171 1.487142 TCGATCGACCTCTCCTTCTCT 59.513 52.381 15.15 0.00 0.00 3.10
213 214 8.762481 AGGAAACCATTAAGTACAAAAGTTCT 57.238 30.769 0.00 0.00 0.00 3.01
220 221 9.974980 GAAAATGAAGGAAACCATTAAGTACAA 57.025 29.630 0.00 0.00 33.13 2.41
278 800 2.610859 AACCGGGACAGATGGGCT 60.611 61.111 6.32 0.00 0.00 5.19
323 845 3.994931 AAAGGGTCGTTACTAATGCCT 57.005 42.857 0.00 0.00 0.00 4.75
380 902 1.503800 ACCCCTATTAGTCCCGGTTG 58.496 55.000 0.00 0.00 0.00 3.77
414 936 4.075963 AGCTGTCATTTGCCATGTTTTT 57.924 36.364 0.00 0.00 0.00 1.94
415 937 3.756933 AGCTGTCATTTGCCATGTTTT 57.243 38.095 0.00 0.00 0.00 2.43
416 938 3.395639 CAAGCTGTCATTTGCCATGTTT 58.604 40.909 0.00 0.00 0.00 2.83
417 939 2.289195 CCAAGCTGTCATTTGCCATGTT 60.289 45.455 0.00 0.00 0.00 2.71
418 940 1.274167 CCAAGCTGTCATTTGCCATGT 59.726 47.619 0.00 0.00 0.00 3.21
419 941 1.546923 TCCAAGCTGTCATTTGCCATG 59.453 47.619 0.00 0.00 0.00 3.66
420 942 1.927487 TCCAAGCTGTCATTTGCCAT 58.073 45.000 0.00 0.00 0.00 4.40
421 943 1.546923 CATCCAAGCTGTCATTTGCCA 59.453 47.619 0.00 0.00 0.00 4.92
422 944 1.547372 ACATCCAAGCTGTCATTTGCC 59.453 47.619 0.00 0.00 0.00 4.52
423 945 2.602878 CACATCCAAGCTGTCATTTGC 58.397 47.619 0.00 0.00 0.00 3.68
424 946 2.094390 CCCACATCCAAGCTGTCATTTG 60.094 50.000 0.00 0.00 0.00 2.32
425 947 2.173519 CCCACATCCAAGCTGTCATTT 58.826 47.619 0.00 0.00 0.00 2.32
426 948 1.355381 TCCCACATCCAAGCTGTCATT 59.645 47.619 0.00 0.00 0.00 2.57
427 949 0.994247 TCCCACATCCAAGCTGTCAT 59.006 50.000 0.00 0.00 0.00 3.06
428 950 0.325933 CTCCCACATCCAAGCTGTCA 59.674 55.000 0.00 0.00 0.00 3.58
429 951 0.615331 TCTCCCACATCCAAGCTGTC 59.385 55.000 0.00 0.00 0.00 3.51
430 952 0.617413 CTCTCCCACATCCAAGCTGT 59.383 55.000 0.00 0.00 0.00 4.40
431 953 0.617413 ACTCTCCCACATCCAAGCTG 59.383 55.000 0.00 0.00 0.00 4.24
432 954 0.617413 CACTCTCCCACATCCAAGCT 59.383 55.000 0.00 0.00 0.00 3.74
433 955 0.393537 CCACTCTCCCACATCCAAGC 60.394 60.000 0.00 0.00 0.00 4.01
434 956 0.254178 CCCACTCTCCCACATCCAAG 59.746 60.000 0.00 0.00 0.00 3.61
435 957 0.178876 TCCCACTCTCCCACATCCAA 60.179 55.000 0.00 0.00 0.00 3.53
436 958 0.178876 TTCCCACTCTCCCACATCCA 60.179 55.000 0.00 0.00 0.00 3.41
437 959 0.991920 TTTCCCACTCTCCCACATCC 59.008 55.000 0.00 0.00 0.00 3.51
438 960 2.879103 TTTTCCCACTCTCCCACATC 57.121 50.000 0.00 0.00 0.00 3.06
439 961 2.291800 CCATTTTCCCACTCTCCCACAT 60.292 50.000 0.00 0.00 0.00 3.21
440 962 1.075374 CCATTTTCCCACTCTCCCACA 59.925 52.381 0.00 0.00 0.00 4.17
441 963 1.616994 CCCATTTTCCCACTCTCCCAC 60.617 57.143 0.00 0.00 0.00 4.61
442 964 0.704076 CCCATTTTCCCACTCTCCCA 59.296 55.000 0.00 0.00 0.00 4.37
443 965 0.684479 GCCCATTTTCCCACTCTCCC 60.684 60.000 0.00 0.00 0.00 4.30
444 966 0.039618 TGCCCATTTTCCCACTCTCC 59.960 55.000 0.00 0.00 0.00 3.71
445 967 1.272147 ACTGCCCATTTTCCCACTCTC 60.272 52.381 0.00 0.00 0.00 3.20
446 968 0.779997 ACTGCCCATTTTCCCACTCT 59.220 50.000 0.00 0.00 0.00 3.24
447 969 1.177401 GACTGCCCATTTTCCCACTC 58.823 55.000 0.00 0.00 0.00 3.51
448 970 0.609131 CGACTGCCCATTTTCCCACT 60.609 55.000 0.00 0.00 0.00 4.00
449 971 0.893727 ACGACTGCCCATTTTCCCAC 60.894 55.000 0.00 0.00 0.00 4.61
450 972 0.893270 CACGACTGCCCATTTTCCCA 60.893 55.000 0.00 0.00 0.00 4.37
451 973 1.595093 CCACGACTGCCCATTTTCCC 61.595 60.000 0.00 0.00 0.00 3.97
452 974 0.608035 TCCACGACTGCCCATTTTCC 60.608 55.000 0.00 0.00 0.00 3.13
453 975 1.200020 CTTCCACGACTGCCCATTTTC 59.800 52.381 0.00 0.00 0.00 2.29
454 976 1.202879 TCTTCCACGACTGCCCATTTT 60.203 47.619 0.00 0.00 0.00 1.82
455 977 0.400213 TCTTCCACGACTGCCCATTT 59.600 50.000 0.00 0.00 0.00 2.32
456 978 0.620556 ATCTTCCACGACTGCCCATT 59.379 50.000 0.00 0.00 0.00 3.16
457 979 0.107508 CATCTTCCACGACTGCCCAT 60.108 55.000 0.00 0.00 0.00 4.00
458 980 1.296392 CATCTTCCACGACTGCCCA 59.704 57.895 0.00 0.00 0.00 5.36
459 981 1.450312 CCATCTTCCACGACTGCCC 60.450 63.158 0.00 0.00 0.00 5.36
460 982 1.450312 CCCATCTTCCACGACTGCC 60.450 63.158 0.00 0.00 0.00 4.85
461 983 1.450312 CCCCATCTTCCACGACTGC 60.450 63.158 0.00 0.00 0.00 4.40
462 984 0.613260 TTCCCCATCTTCCACGACTG 59.387 55.000 0.00 0.00 0.00 3.51
463 985 0.613777 GTTCCCCATCTTCCACGACT 59.386 55.000 0.00 0.00 0.00 4.18
464 986 0.323629 TGTTCCCCATCTTCCACGAC 59.676 55.000 0.00 0.00 0.00 4.34
465 987 0.613260 CTGTTCCCCATCTTCCACGA 59.387 55.000 0.00 0.00 0.00 4.35
466 988 0.613260 TCTGTTCCCCATCTTCCACG 59.387 55.000 0.00 0.00 0.00 4.94
467 989 2.040412 ACTTCTGTTCCCCATCTTCCAC 59.960 50.000 0.00 0.00 0.00 4.02
468 990 2.305927 GACTTCTGTTCCCCATCTTCCA 59.694 50.000 0.00 0.00 0.00 3.53
469 991 2.678190 CGACTTCTGTTCCCCATCTTCC 60.678 54.545 0.00 0.00 0.00 3.46
470 992 2.028020 ACGACTTCTGTTCCCCATCTTC 60.028 50.000 0.00 0.00 0.00 2.87
471 993 1.978580 ACGACTTCTGTTCCCCATCTT 59.021 47.619 0.00 0.00 0.00 2.40
472 994 1.276421 CACGACTTCTGTTCCCCATCT 59.724 52.381 0.00 0.00 0.00 2.90
473 995 1.726853 CACGACTTCTGTTCCCCATC 58.273 55.000 0.00 0.00 0.00 3.51
474 996 0.321653 GCACGACTTCTGTTCCCCAT 60.322 55.000 0.00 0.00 0.00 4.00
475 997 1.070786 GCACGACTTCTGTTCCCCA 59.929 57.895 0.00 0.00 0.00 4.96
476 998 2.027625 CGCACGACTTCTGTTCCCC 61.028 63.158 0.00 0.00 0.00 4.81
477 999 2.668280 GCGCACGACTTCTGTTCCC 61.668 63.158 0.30 0.00 0.00 3.97
478 1000 2.853914 GCGCACGACTTCTGTTCC 59.146 61.111 0.30 0.00 0.00 3.62
479 1001 2.465920 CGCGCACGACTTCTGTTC 59.534 61.111 8.75 0.00 43.93 3.18
480 1002 3.702555 GCGCGCACGACTTCTGTT 61.703 61.111 29.10 0.00 43.93 3.16
515 1037 4.309950 GGGACGTGCGGTGGAACT 62.310 66.667 0.00 0.00 36.74 3.01
533 1055 3.665675 ATGAGACCGGTTGCGAGCC 62.666 63.158 9.42 0.00 0.00 4.70
534 1056 1.696832 GAATGAGACCGGTTGCGAGC 61.697 60.000 9.42 0.00 0.00 5.03
535 1057 1.413767 CGAATGAGACCGGTTGCGAG 61.414 60.000 9.42 0.00 0.00 5.03
536 1058 1.445410 CGAATGAGACCGGTTGCGA 60.445 57.895 9.42 0.00 0.00 5.10
537 1059 1.413767 CTCGAATGAGACCGGTTGCG 61.414 60.000 9.42 2.50 45.57 4.85
538 1060 1.084370 CCTCGAATGAGACCGGTTGC 61.084 60.000 9.42 4.34 45.57 4.17
539 1061 0.460284 CCCTCGAATGAGACCGGTTG 60.460 60.000 9.42 0.00 45.57 3.77
540 1062 0.613853 TCCCTCGAATGAGACCGGTT 60.614 55.000 9.42 0.00 45.57 4.44
541 1063 1.000019 TCCCTCGAATGAGACCGGT 60.000 57.895 6.92 6.92 45.57 5.28
542 1064 0.752009 TCTCCCTCGAATGAGACCGG 60.752 60.000 0.00 0.00 45.57 5.28
543 1065 1.103803 TTCTCCCTCGAATGAGACCG 58.896 55.000 11.89 0.00 45.57 4.79
544 1066 2.233922 TGTTTCTCCCTCGAATGAGACC 59.766 50.000 11.89 7.54 45.57 3.85
545 1067 3.056465 ACTGTTTCTCCCTCGAATGAGAC 60.056 47.826 11.89 4.93 45.57 3.36
546 1068 3.056536 CACTGTTTCTCCCTCGAATGAGA 60.057 47.826 8.97 8.97 45.57 3.27
547 1069 3.257393 CACTGTTTCTCCCTCGAATGAG 58.743 50.000 4.82 4.82 42.18 2.90
548 1070 2.632996 ACACTGTTTCTCCCTCGAATGA 59.367 45.455 0.00 0.00 0.00 2.57
549 1071 2.738846 CACACTGTTTCTCCCTCGAATG 59.261 50.000 0.00 0.00 0.00 2.67
550 1072 2.872038 GCACACTGTTTCTCCCTCGAAT 60.872 50.000 0.00 0.00 0.00 3.34
551 1073 1.540363 GCACACTGTTTCTCCCTCGAA 60.540 52.381 0.00 0.00 0.00 3.71
552 1074 0.033504 GCACACTGTTTCTCCCTCGA 59.966 55.000 0.00 0.00 0.00 4.04
553 1075 1.284982 CGCACACTGTTTCTCCCTCG 61.285 60.000 0.00 0.00 0.00 4.63
554 1076 0.951040 CCGCACACTGTTTCTCCCTC 60.951 60.000 0.00 0.00 0.00 4.30
555 1077 1.071471 CCGCACACTGTTTCTCCCT 59.929 57.895 0.00 0.00 0.00 4.20
556 1078 2.617274 GCCGCACACTGTTTCTCCC 61.617 63.158 0.00 0.00 0.00 4.30
557 1079 2.946762 GCCGCACACTGTTTCTCC 59.053 61.111 0.00 0.00 0.00 3.71
558 1080 1.495584 TTCGCCGCACACTGTTTCTC 61.496 55.000 0.00 0.00 0.00 2.87
559 1081 1.522806 TTCGCCGCACACTGTTTCT 60.523 52.632 0.00 0.00 0.00 2.52
560 1082 1.368850 GTTCGCCGCACACTGTTTC 60.369 57.895 0.00 0.00 0.00 2.78
561 1083 0.531090 TAGTTCGCCGCACACTGTTT 60.531 50.000 2.30 0.00 0.00 2.83
562 1084 1.068417 TAGTTCGCCGCACACTGTT 59.932 52.632 2.30 0.00 0.00 3.16
563 1085 1.663702 GTAGTTCGCCGCACACTGT 60.664 57.895 2.30 0.00 0.00 3.55
564 1086 2.380410 GGTAGTTCGCCGCACACTG 61.380 63.158 2.30 0.00 0.00 3.66
565 1087 1.246056 TAGGTAGTTCGCCGCACACT 61.246 55.000 0.00 0.00 0.00 3.55
566 1088 1.074872 GTAGGTAGTTCGCCGCACAC 61.075 60.000 0.00 0.00 0.00 3.82
567 1089 1.213537 GTAGGTAGTTCGCCGCACA 59.786 57.895 0.00 0.00 0.00 4.57
568 1090 0.179119 ATGTAGGTAGTTCGCCGCAC 60.179 55.000 0.00 0.00 0.00 5.34
569 1091 1.066002 GTATGTAGGTAGTTCGCCGCA 59.934 52.381 0.00 0.00 0.00 5.69
570 1092 1.601412 GGTATGTAGGTAGTTCGCCGC 60.601 57.143 0.00 0.00 0.00 6.53
571 1093 1.677576 TGGTATGTAGGTAGTTCGCCG 59.322 52.381 0.00 0.00 0.00 6.46
572 1094 2.428171 TGTGGTATGTAGGTAGTTCGCC 59.572 50.000 0.00 0.00 0.00 5.54
573 1095 3.119388 TGTGTGGTATGTAGGTAGTTCGC 60.119 47.826 0.00 0.00 0.00 4.70
574 1096 4.082625 TGTGTGTGGTATGTAGGTAGTTCG 60.083 45.833 0.00 0.00 0.00 3.95
575 1097 5.166398 GTGTGTGTGGTATGTAGGTAGTTC 58.834 45.833 0.00 0.00 0.00 3.01
576 1098 4.020839 GGTGTGTGTGGTATGTAGGTAGTT 60.021 45.833 0.00 0.00 0.00 2.24
577 1099 3.512724 GGTGTGTGTGGTATGTAGGTAGT 59.487 47.826 0.00 0.00 0.00 2.73
578 1100 3.428452 CGGTGTGTGTGGTATGTAGGTAG 60.428 52.174 0.00 0.00 0.00 3.18
579 1101 2.492881 CGGTGTGTGTGGTATGTAGGTA 59.507 50.000 0.00 0.00 0.00 3.08
580 1102 1.274167 CGGTGTGTGTGGTATGTAGGT 59.726 52.381 0.00 0.00 0.00 3.08
581 1103 1.404986 CCGGTGTGTGTGGTATGTAGG 60.405 57.143 0.00 0.00 0.00 3.18
582 1104 1.404986 CCCGGTGTGTGTGGTATGTAG 60.405 57.143 0.00 0.00 0.00 2.74
583 1105 0.609151 CCCGGTGTGTGTGGTATGTA 59.391 55.000 0.00 0.00 0.00 2.29
584 1106 1.373435 CCCGGTGTGTGTGGTATGT 59.627 57.895 0.00 0.00 0.00 2.29
585 1107 2.038269 GCCCGGTGTGTGTGGTATG 61.038 63.158 0.00 0.00 0.00 2.39
586 1108 1.774894 AAGCCCGGTGTGTGTGGTAT 61.775 55.000 0.00 0.00 0.00 2.73
587 1109 2.445119 AAGCCCGGTGTGTGTGGTA 61.445 57.895 0.00 0.00 0.00 3.25
588 1110 3.804329 AAGCCCGGTGTGTGTGGT 61.804 61.111 0.00 0.00 0.00 4.16
589 1111 3.286751 CAAGCCCGGTGTGTGTGG 61.287 66.667 0.00 0.00 0.00 4.17
590 1112 2.515991 ACAAGCCCGGTGTGTGTG 60.516 61.111 0.00 0.00 0.00 3.82
591 1113 2.203153 GACAAGCCCGGTGTGTGT 60.203 61.111 0.00 0.00 0.00 3.72
592 1114 2.107041 TAGGACAAGCCCGGTGTGTG 62.107 60.000 0.00 0.00 37.37 3.82
593 1115 1.839747 TAGGACAAGCCCGGTGTGT 60.840 57.895 0.00 0.32 37.37 3.72
594 1116 1.375523 GTAGGACAAGCCCGGTGTG 60.376 63.158 0.00 0.00 37.37 3.82
595 1117 2.939261 CGTAGGACAAGCCCGGTGT 61.939 63.158 0.00 0.00 37.37 4.16
596 1118 1.597797 TACGTAGGACAAGCCCGGTG 61.598 60.000 0.00 0.00 37.37 4.94
597 1119 0.899717 TTACGTAGGACAAGCCCGGT 60.900 55.000 0.00 0.00 37.37 5.28
598 1120 0.459063 GTTACGTAGGACAAGCCCGG 60.459 60.000 0.00 0.00 37.37 5.73
599 1121 0.244450 TGTTACGTAGGACAAGCCCG 59.756 55.000 0.00 0.00 37.37 6.13
600 1122 1.001181 TGTGTTACGTAGGACAAGCCC 59.999 52.381 1.75 0.00 37.37 5.19
601 1123 2.443887 TGTGTTACGTAGGACAAGCC 57.556 50.000 1.75 0.00 30.17 4.35
602 1124 6.470557 TTTATTGTGTTACGTAGGACAAGC 57.529 37.500 19.90 4.97 32.12 4.01
603 1125 7.332430 TGGATTTATTGTGTTACGTAGGACAAG 59.668 37.037 19.90 0.00 32.12 3.16
604 1126 7.160049 TGGATTTATTGTGTTACGTAGGACAA 58.840 34.615 18.40 18.40 33.09 3.18
605 1127 6.699366 TGGATTTATTGTGTTACGTAGGACA 58.301 36.000 0.00 0.00 0.00 4.02
606 1128 7.781548 ATGGATTTATTGTGTTACGTAGGAC 57.218 36.000 0.00 0.00 0.00 3.85
607 1129 8.795842 AAATGGATTTATTGTGTTACGTAGGA 57.204 30.769 0.00 0.00 0.00 2.94
608 1130 9.849166 AAAAATGGATTTATTGTGTTACGTAGG 57.151 29.630 0.00 0.00 0.00 3.18
631 1153 4.024472 TCGCACGAATCTTGACATCAAAAA 60.024 37.500 0.00 0.00 35.15 1.94
632 1154 3.496507 TCGCACGAATCTTGACATCAAAA 59.503 39.130 0.00 0.00 35.15 2.44
633 1155 3.063485 TCGCACGAATCTTGACATCAAA 58.937 40.909 0.00 0.00 35.15 2.69
634 1156 2.682836 TCGCACGAATCTTGACATCAA 58.317 42.857 0.00 0.00 0.00 2.57
635 1157 2.362169 TCGCACGAATCTTGACATCA 57.638 45.000 0.00 0.00 0.00 3.07
636 1158 3.722555 TTTCGCACGAATCTTGACATC 57.277 42.857 6.28 0.00 33.79 3.06
637 1159 4.219033 GTTTTTCGCACGAATCTTGACAT 58.781 39.130 6.28 0.00 33.79 3.06
638 1160 3.064134 TGTTTTTCGCACGAATCTTGACA 59.936 39.130 6.28 5.06 33.79 3.58
639 1161 3.613563 TGTTTTTCGCACGAATCTTGAC 58.386 40.909 6.28 2.76 33.79 3.18
640 1162 3.953874 TGTTTTTCGCACGAATCTTGA 57.046 38.095 6.28 0.00 33.79 3.02
641 1163 3.179599 GGTTGTTTTTCGCACGAATCTTG 59.820 43.478 6.28 0.00 33.79 3.02
642 1164 3.181495 TGGTTGTTTTTCGCACGAATCTT 60.181 39.130 6.28 0.00 33.79 2.40
643 1165 2.356382 TGGTTGTTTTTCGCACGAATCT 59.644 40.909 6.28 0.00 33.79 2.40
644 1166 2.722071 TGGTTGTTTTTCGCACGAATC 58.278 42.857 6.28 1.94 33.79 2.52
645 1167 2.853731 TGGTTGTTTTTCGCACGAAT 57.146 40.000 6.28 0.00 33.79 3.34
646 1168 2.251893 GTTGGTTGTTTTTCGCACGAA 58.748 42.857 0.49 0.49 0.00 3.85
647 1169 1.790838 CGTTGGTTGTTTTTCGCACGA 60.791 47.619 0.00 0.00 0.00 4.35
648 1170 0.563857 CGTTGGTTGTTTTTCGCACG 59.436 50.000 0.00 0.00 0.00 5.34
649 1171 1.580256 GTCGTTGGTTGTTTTTCGCAC 59.420 47.619 0.00 0.00 0.00 5.34
650 1172 1.790838 CGTCGTTGGTTGTTTTTCGCA 60.791 47.619 0.00 0.00 0.00 5.10
651 1173 0.835120 CGTCGTTGGTTGTTTTTCGC 59.165 50.000 0.00 0.00 0.00 4.70
652 1174 2.438933 TCGTCGTTGGTTGTTTTTCG 57.561 45.000 0.00 0.00 0.00 3.46
653 1175 4.344448 TGAATCGTCGTTGGTTGTTTTTC 58.656 39.130 0.00 0.00 0.00 2.29
654 1176 4.358494 TGAATCGTCGTTGGTTGTTTTT 57.642 36.364 0.00 0.00 0.00 1.94
655 1177 4.286910 CATGAATCGTCGTTGGTTGTTTT 58.713 39.130 0.00 0.00 0.00 2.43
656 1178 3.851838 GCATGAATCGTCGTTGGTTGTTT 60.852 43.478 0.00 0.00 0.00 2.83
657 1179 2.350388 GCATGAATCGTCGTTGGTTGTT 60.350 45.455 0.00 0.00 0.00 2.83
658 1180 1.196808 GCATGAATCGTCGTTGGTTGT 59.803 47.619 0.00 0.00 0.00 3.32
659 1181 1.786575 CGCATGAATCGTCGTTGGTTG 60.787 52.381 0.00 0.00 0.00 3.77
660 1182 0.442310 CGCATGAATCGTCGTTGGTT 59.558 50.000 0.00 0.00 0.00 3.67
661 1183 0.669318 ACGCATGAATCGTCGTTGGT 60.669 50.000 0.00 0.00 34.84 3.67
662 1184 0.247262 CACGCATGAATCGTCGTTGG 60.247 55.000 0.00 0.00 38.19 3.77
663 1185 0.438445 ACACGCATGAATCGTCGTTG 59.562 50.000 0.00 0.00 38.19 4.10
664 1186 0.438445 CACACGCATGAATCGTCGTT 59.562 50.000 0.00 0.00 38.19 3.85
665 1187 1.351430 CCACACGCATGAATCGTCGT 61.351 55.000 0.00 0.00 38.19 4.34
666 1188 1.075979 TCCACACGCATGAATCGTCG 61.076 55.000 0.00 0.00 38.19 5.12
667 1189 0.370273 GTCCACACGCATGAATCGTC 59.630 55.000 0.00 0.00 38.19 4.20
668 1190 1.351430 CGTCCACACGCATGAATCGT 61.351 55.000 0.00 0.00 39.69 3.73
669 1191 1.075979 TCGTCCACACGCATGAATCG 61.076 55.000 0.00 0.00 46.28 3.34
670 1192 1.075542 TTCGTCCACACGCATGAATC 58.924 50.000 0.00 0.00 46.28 2.52
671 1193 1.737838 ATTCGTCCACACGCATGAAT 58.262 45.000 0.00 0.00 46.28 2.57
672 1194 1.518325 AATTCGTCCACACGCATGAA 58.482 45.000 0.00 0.00 46.28 2.57
673 1195 2.371910 TAATTCGTCCACACGCATGA 57.628 45.000 0.00 0.00 46.28 3.07
674 1196 3.124466 TCTTTAATTCGTCCACACGCATG 59.876 43.478 0.00 0.00 46.28 4.06
675 1197 3.124636 GTCTTTAATTCGTCCACACGCAT 59.875 43.478 0.00 0.00 46.28 4.73
676 1198 2.477375 GTCTTTAATTCGTCCACACGCA 59.523 45.455 0.00 0.00 46.28 5.24
677 1199 2.471749 CGTCTTTAATTCGTCCACACGC 60.472 50.000 0.00 0.00 46.28 5.34
679 1201 3.663493 GCACGTCTTTAATTCGTCCACAC 60.663 47.826 0.00 0.00 35.62 3.82
680 1202 2.477375 GCACGTCTTTAATTCGTCCACA 59.523 45.455 0.00 0.00 35.62 4.17
681 1203 2.159747 GGCACGTCTTTAATTCGTCCAC 60.160 50.000 0.00 0.00 35.62 4.02
682 1204 2.070783 GGCACGTCTTTAATTCGTCCA 58.929 47.619 0.00 0.00 35.62 4.02
683 1205 2.070783 TGGCACGTCTTTAATTCGTCC 58.929 47.619 0.00 0.00 35.62 4.79
684 1206 2.477375 TGTGGCACGTCTTTAATTCGTC 59.523 45.455 13.77 0.00 35.62 4.20
685 1207 2.222445 GTGTGGCACGTCTTTAATTCGT 59.778 45.455 13.77 0.00 38.34 3.85
686 1208 2.834689 GTGTGGCACGTCTTTAATTCG 58.165 47.619 13.77 0.00 0.00 3.34
704 1226 3.185299 TAAGGCCCACCCACACGTG 62.185 63.158 15.48 15.48 36.11 4.49
705 1227 2.850130 TAAGGCCCACCCACACGT 60.850 61.111 0.00 0.00 36.11 4.49
706 1228 2.046314 CTAAGGCCCACCCACACG 60.046 66.667 0.00 0.00 36.11 4.49
707 1229 1.303317 CACTAAGGCCCACCCACAC 60.303 63.158 0.00 0.00 36.11 3.82
708 1230 1.357272 AACACTAAGGCCCACCCACA 61.357 55.000 0.00 0.00 36.11 4.17
709 1231 0.178973 AAACACTAAGGCCCACCCAC 60.179 55.000 0.00 0.00 36.11 4.61
710 1232 0.111639 GAAACACTAAGGCCCACCCA 59.888 55.000 0.00 0.00 36.11 4.51
711 1233 0.958876 CGAAACACTAAGGCCCACCC 60.959 60.000 0.00 0.00 36.11 4.61
712 1234 0.958876 CCGAAACACTAAGGCCCACC 60.959 60.000 0.00 0.00 0.00 4.61
713 1235 0.035739 TCCGAAACACTAAGGCCCAC 59.964 55.000 0.00 0.00 0.00 4.61
714 1236 0.766131 TTCCGAAACACTAAGGCCCA 59.234 50.000 0.00 0.00 0.00 5.36
715 1237 1.900245 TTTCCGAAACACTAAGGCCC 58.100 50.000 0.00 0.00 0.00 5.80
716 1238 4.514781 AAATTTCCGAAACACTAAGGCC 57.485 40.909 0.00 0.00 0.00 5.19
717 1239 6.675026 AGTAAAATTTCCGAAACACTAAGGC 58.325 36.000 0.00 0.00 0.00 4.35
718 1240 7.040961 TGGAGTAAAATTTCCGAAACACTAAGG 60.041 37.037 0.00 0.00 36.22 2.69
719 1241 7.867752 TGGAGTAAAATTTCCGAAACACTAAG 58.132 34.615 0.00 0.00 36.22 2.18
720 1242 7.520937 GCTGGAGTAAAATTTCCGAAACACTAA 60.521 37.037 0.00 0.00 36.22 2.24
721 1243 6.072893 GCTGGAGTAAAATTTCCGAAACACTA 60.073 38.462 0.00 0.00 36.22 2.74
722 1244 5.278315 GCTGGAGTAAAATTTCCGAAACACT 60.278 40.000 0.00 0.00 36.22 3.55
723 1245 4.915667 GCTGGAGTAAAATTTCCGAAACAC 59.084 41.667 0.00 0.00 36.22 3.32
724 1246 4.825085 AGCTGGAGTAAAATTTCCGAAACA 59.175 37.500 0.00 0.00 36.22 2.83
725 1247 5.372547 AGCTGGAGTAAAATTTCCGAAAC 57.627 39.130 0.00 0.00 36.22 2.78
726 1248 4.153475 CGAGCTGGAGTAAAATTTCCGAAA 59.847 41.667 0.00 0.00 36.22 3.46
727 1249 3.682858 CGAGCTGGAGTAAAATTTCCGAA 59.317 43.478 0.00 0.00 36.22 4.30
728 1250 3.056393 TCGAGCTGGAGTAAAATTTCCGA 60.056 43.478 0.00 0.00 36.22 4.55
729 1251 3.259064 TCGAGCTGGAGTAAAATTTCCG 58.741 45.455 0.00 0.00 36.22 4.30
730 1252 4.025647 CGATCGAGCTGGAGTAAAATTTCC 60.026 45.833 10.26 0.00 0.00 3.13
731 1253 4.025647 CCGATCGAGCTGGAGTAAAATTTC 60.026 45.833 18.66 0.00 0.00 2.17
750 1272 3.448686 CTGCGAGAAGTTGTAATCCGAT 58.551 45.455 0.00 0.00 0.00 4.18
751 1273 2.876091 CTGCGAGAAGTTGTAATCCGA 58.124 47.619 0.00 0.00 0.00 4.55
752 1274 1.324736 GCTGCGAGAAGTTGTAATCCG 59.675 52.381 0.00 0.00 0.00 4.18
753 1275 2.094417 GTGCTGCGAGAAGTTGTAATCC 59.906 50.000 0.00 0.00 0.00 3.01
754 1276 2.736721 TGTGCTGCGAGAAGTTGTAATC 59.263 45.455 0.00 0.00 0.00 1.75
755 1277 2.766313 TGTGCTGCGAGAAGTTGTAAT 58.234 42.857 0.00 0.00 0.00 1.89
756 1278 2.232756 TGTGCTGCGAGAAGTTGTAA 57.767 45.000 0.00 0.00 0.00 2.41
757 1279 2.232756 TTGTGCTGCGAGAAGTTGTA 57.767 45.000 0.00 0.00 0.00 2.41
758 1280 1.064060 GTTTGTGCTGCGAGAAGTTGT 59.936 47.619 0.00 0.00 0.00 3.32
759 1281 1.063912 TGTTTGTGCTGCGAGAAGTTG 59.936 47.619 0.00 0.00 0.00 3.16
760 1282 1.064060 GTGTTTGTGCTGCGAGAAGTT 59.936 47.619 0.00 0.00 0.00 2.66
775 1297 0.655733 CCGCTCGTGTTCAAGTGTTT 59.344 50.000 0.00 0.00 0.00 2.83
790 1316 4.988716 TGGTGTCCGTCTCCCGCT 62.989 66.667 0.00 0.00 34.38 5.52
791 1317 4.436998 CTGGTGTCCGTCTCCCGC 62.437 72.222 0.00 0.00 34.38 6.13
805 1331 1.640428 TTCGCATTTAGACTCGCTGG 58.360 50.000 0.00 0.00 0.00 4.85
808 1334 2.201732 TGGATTCGCATTTAGACTCGC 58.798 47.619 0.00 0.00 0.00 5.03
815 1341 5.221422 GGATTCCCATTTGGATTCGCATTTA 60.221 40.000 0.00 0.00 44.66 1.40
864 1390 0.239347 ATACCGCCTGCGATACGTAC 59.761 55.000 13.94 0.00 42.83 3.67
865 1391 0.518636 GATACCGCCTGCGATACGTA 59.481 55.000 13.94 6.95 42.83 3.57
866 1392 1.285023 GATACCGCCTGCGATACGT 59.715 57.895 13.94 4.78 42.83 3.57
867 1393 1.443872 GGATACCGCCTGCGATACG 60.444 63.158 13.94 0.00 42.83 3.06
868 1394 4.573162 GGATACCGCCTGCGATAC 57.427 61.111 13.94 0.00 42.83 2.24
887 1413 2.979130 GCCAATAGAGTCAGGCGAC 58.021 57.895 0.00 1.99 42.95 5.19
891 1417 2.114616 ACTCCAGCCAATAGAGTCAGG 58.885 52.381 0.00 0.00 36.06 3.86
892 1418 3.957497 AGTACTCCAGCCAATAGAGTCAG 59.043 47.826 0.00 0.00 41.09 3.51
893 1419 3.982516 AGTACTCCAGCCAATAGAGTCA 58.017 45.455 0.00 0.00 41.09 3.41
894 1420 7.948034 ATATAGTACTCCAGCCAATAGAGTC 57.052 40.000 0.00 0.00 41.09 3.36
895 1421 9.998752 AATATATAGTACTCCAGCCAATAGAGT 57.001 33.333 0.00 0.00 43.17 3.24
901 1427 9.375974 ACTGTAAATATATAGTACTCCAGCCAA 57.624 33.333 0.00 0.00 32.35 4.52
902 1428 8.951614 ACTGTAAATATATAGTACTCCAGCCA 57.048 34.615 0.00 0.00 32.35 4.75
916 1442 9.675464 CTCTTGGGGTGTAAAACTGTAAATATA 57.325 33.333 0.00 0.00 0.00 0.86
917 1443 7.614192 CCTCTTGGGGTGTAAAACTGTAAATAT 59.386 37.037 0.00 0.00 0.00 1.28
918 1444 6.943718 CCTCTTGGGGTGTAAAACTGTAAATA 59.056 38.462 0.00 0.00 0.00 1.40
919 1445 5.773176 CCTCTTGGGGTGTAAAACTGTAAAT 59.227 40.000 0.00 0.00 0.00 1.40
920 1446 5.104024 TCCTCTTGGGGTGTAAAACTGTAAA 60.104 40.000 0.00 0.00 35.33 2.01
921 1447 4.412858 TCCTCTTGGGGTGTAAAACTGTAA 59.587 41.667 0.00 0.00 35.33 2.41
922 1448 3.975312 TCCTCTTGGGGTGTAAAACTGTA 59.025 43.478 0.00 0.00 35.33 2.74
923 1449 2.781174 TCCTCTTGGGGTGTAAAACTGT 59.219 45.455 0.00 0.00 35.33 3.55
924 1450 3.502123 TCCTCTTGGGGTGTAAAACTG 57.498 47.619 0.00 0.00 35.33 3.16
925 1451 4.105697 TGATTCCTCTTGGGGTGTAAAACT 59.894 41.667 0.00 0.00 35.33 2.66
926 1452 4.403734 TGATTCCTCTTGGGGTGTAAAAC 58.596 43.478 0.00 0.00 35.33 2.43
927 1453 4.733077 TGATTCCTCTTGGGGTGTAAAA 57.267 40.909 0.00 0.00 35.33 1.52
939 1465 2.104451 AGATGCAGCGATTGATTCCTCT 59.896 45.455 0.00 0.00 0.00 3.69
950 1476 1.433471 CCGTCTGTAGATGCAGCGA 59.567 57.895 13.16 0.00 37.82 4.93
952 1478 2.233654 CGCCGTCTGTAGATGCAGC 61.234 63.158 0.00 0.00 36.49 5.25
956 1482 0.308068 ATCGTCGCCGTCTGTAGATG 59.692 55.000 0.00 0.00 35.01 2.90
967 1493 4.299316 GCAATGCCGATCGTCGCC 62.299 66.667 15.09 0.00 38.82 5.54
1066 1592 0.104855 TTCTCAAGATCATCCGCCGG 59.895 55.000 0.00 0.00 0.00 6.13
1067 1593 1.939974 TTTCTCAAGATCATCCGCCG 58.060 50.000 0.00 0.00 0.00 6.46
1068 1594 2.615912 CCTTTTCTCAAGATCATCCGCC 59.384 50.000 0.00 0.00 0.00 6.13
1069 1595 2.032675 GCCTTTTCTCAAGATCATCCGC 59.967 50.000 0.00 0.00 0.00 5.54
1070 1596 3.273434 TGCCTTTTCTCAAGATCATCCG 58.727 45.455 0.00 0.00 0.00 4.18
1071 1597 4.521146 TCTGCCTTTTCTCAAGATCATCC 58.479 43.478 0.00 0.00 0.00 3.51
1072 1598 4.575645 CCTCTGCCTTTTCTCAAGATCATC 59.424 45.833 0.00 0.00 0.00 2.92
1073 1599 4.226846 TCCTCTGCCTTTTCTCAAGATCAT 59.773 41.667 0.00 0.00 0.00 2.45
1074 1600 3.584406 TCCTCTGCCTTTTCTCAAGATCA 59.416 43.478 0.00 0.00 0.00 2.92
1075 1601 3.938334 GTCCTCTGCCTTTTCTCAAGATC 59.062 47.826 0.00 0.00 0.00 2.75
1076 1602 3.618507 CGTCCTCTGCCTTTTCTCAAGAT 60.619 47.826 0.00 0.00 0.00 2.40
1077 1603 2.289072 CGTCCTCTGCCTTTTCTCAAGA 60.289 50.000 0.00 0.00 0.00 3.02
1078 1604 2.072298 CGTCCTCTGCCTTTTCTCAAG 58.928 52.381 0.00 0.00 0.00 3.02
1079 1605 1.878102 GCGTCCTCTGCCTTTTCTCAA 60.878 52.381 0.00 0.00 0.00 3.02
1080 1606 0.320771 GCGTCCTCTGCCTTTTCTCA 60.321 55.000 0.00 0.00 0.00 3.27
1081 1607 0.320771 TGCGTCCTCTGCCTTTTCTC 60.321 55.000 0.00 0.00 0.00 2.87
1082 1608 0.321122 CTGCGTCCTCTGCCTTTTCT 60.321 55.000 0.00 0.00 0.00 2.52
1083 1609 1.916697 GCTGCGTCCTCTGCCTTTTC 61.917 60.000 0.00 0.00 0.00 2.29
1084 1610 1.968540 GCTGCGTCCTCTGCCTTTT 60.969 57.895 0.00 0.00 0.00 2.27
1085 1611 2.359230 GCTGCGTCCTCTGCCTTT 60.359 61.111 0.00 0.00 0.00 3.11
1086 1612 4.400961 GGCTGCGTCCTCTGCCTT 62.401 66.667 4.71 0.00 44.57 4.35
1121 1647 2.362120 GCCCCTGCAGCAGATGTT 60.362 61.111 24.90 0.00 37.47 2.71
1161 1687 1.282875 CGTGAGTGACAGCGTCAGA 59.717 57.895 10.88 0.00 43.57 3.27
1267 1802 4.207281 TTCATCCGAGGGCGCGAG 62.207 66.667 12.10 0.00 35.83 5.03
1275 1810 3.242220 CGCAAAGTTCATCTTCATCCGAG 60.242 47.826 0.00 0.00 35.02 4.63
1292 1827 2.718731 CGTTTGGTCCTGCGCAAA 59.281 55.556 13.05 0.00 0.00 3.68
1297 1832 3.723348 GTCGGCGTTTGGTCCTGC 61.723 66.667 6.85 0.00 0.00 4.85
1342 1880 1.006805 CGGCCGAGCTATCTTCCTG 60.007 63.158 24.07 0.00 0.00 3.86
1370 1908 3.361977 GCGCCGTTTCCACCACAT 61.362 61.111 0.00 0.00 0.00 3.21
1389 1930 1.551503 CGATGGCATCCACGATCACG 61.552 60.000 21.20 3.52 45.75 4.35
1416 1957 4.481112 CTGTTCGCATTGGCCGCC 62.481 66.667 1.04 1.04 36.38 6.13
1435 1976 3.478540 GCTTCTTGGGCGGTAGAAT 57.521 52.632 0.00 0.00 30.57 2.40
1481 2022 2.511600 CTGATGTCCCCGGCGTTC 60.512 66.667 6.01 0.00 0.00 3.95
1578 2161 1.242076 GTTGACAGTCCATTGCTGCT 58.758 50.000 0.00 0.00 37.47 4.24
1591 2174 1.374125 CAGCGTCGATGGGTTGACA 60.374 57.895 6.79 0.00 38.46 3.58
1631 2220 2.900273 GCCATACTCTGCCACGGA 59.100 61.111 0.00 0.00 0.00 4.69
1770 2368 3.770040 TATGAGCACCACGCCGCT 61.770 61.111 0.00 0.00 44.04 5.52
1783 2381 2.184830 CGGCGAGAGGGACGTATGA 61.185 63.158 0.00 0.00 32.57 2.15
1886 2484 3.785859 GGAGCTGATGGTCGGGCA 61.786 66.667 0.00 0.00 41.26 5.36
1892 2490 1.134580 CGATGAAGTGGAGCTGATGGT 60.135 52.381 0.00 0.00 0.00 3.55
1896 2494 1.219124 GGCGATGAAGTGGAGCTGA 59.781 57.895 0.00 0.00 0.00 4.26
1898 2496 2.293318 TGGGCGATGAAGTGGAGCT 61.293 57.895 0.00 0.00 0.00 4.09
1903 2501 1.503542 GCTTGTGGGCGATGAAGTG 59.496 57.895 0.00 0.00 0.00 3.16
1959 2557 3.925238 CCGCGCGGTATCAACAGC 61.925 66.667 39.71 0.00 42.60 4.40
1993 2591 2.519780 GTCGGAGAGGAGCGGGAT 60.520 66.667 0.00 0.00 36.95 3.85
2081 2691 1.653094 CTTCTCCTCGCTGCTCTCGT 61.653 60.000 0.00 0.00 0.00 4.18
2140 2750 3.780624 GGTTGATGTAGACCGGCAT 57.219 52.632 0.00 0.00 0.00 4.40
2181 2791 3.041940 GTCCACCGCGTCAGTTGG 61.042 66.667 4.92 3.42 0.00 3.77
2202 2812 2.826738 AGCACCGTGTTGCCGTTT 60.827 55.556 0.00 0.00 44.14 3.60
2262 2872 0.028110 GGATTTCGTCCATCGCTTGC 59.972 55.000 0.00 0.00 46.96 4.01
2284 2894 0.034863 GGGTTCTGGAACGCCCATAA 60.035 55.000 16.33 0.00 45.57 1.90
2355 2979 2.932194 TGCTGCCCTCCTTCTGCT 60.932 61.111 0.00 0.00 0.00 4.24
2458 3100 4.223477 ACTGTATTTCATGGCCAAAGCAAT 59.777 37.500 10.96 10.55 42.56 3.56
2459 3101 3.577848 ACTGTATTTCATGGCCAAAGCAA 59.422 39.130 10.96 2.24 42.56 3.91
2460 3102 3.164268 ACTGTATTTCATGGCCAAAGCA 58.836 40.909 10.96 2.59 42.56 3.91
2461 3103 3.193267 TGACTGTATTTCATGGCCAAAGC 59.807 43.478 10.96 0.00 38.76 3.51
2467 3109 4.009675 TCTTGGTGACTGTATTTCATGGC 58.990 43.478 0.00 0.00 0.00 4.40
2468 3110 5.882000 TCATCTTGGTGACTGTATTTCATGG 59.118 40.000 0.00 0.00 0.00 3.66
2469 3111 6.990341 TCATCTTGGTGACTGTATTTCATG 57.010 37.500 0.00 0.00 0.00 3.07
2470 3112 9.281371 CATATCATCTTGGTGACTGTATTTCAT 57.719 33.333 0.00 0.00 0.00 2.57
2471 3113 8.485392 TCATATCATCTTGGTGACTGTATTTCA 58.515 33.333 0.00 0.00 0.00 2.69
2472 3114 8.893219 TCATATCATCTTGGTGACTGTATTTC 57.107 34.615 0.00 0.00 0.00 2.17
2473 3115 9.499479 GATCATATCATCTTGGTGACTGTATTT 57.501 33.333 0.00 0.00 0.00 1.40
2476 3122 7.601705 TGATCATATCATCTTGGTGACTGTA 57.398 36.000 0.00 0.00 33.59 2.74
2478 3124 9.099454 CATATGATCATATCATCTTGGTGACTG 57.901 37.037 22.76 6.95 46.62 3.51
2485 3131 7.571025 TGGGGTCATATGATCATATCATCTTG 58.429 38.462 22.76 13.72 46.62 3.02
2498 3144 4.947388 GCTTGTAACTTTGGGGTCATATGA 59.053 41.667 0.00 0.00 0.00 2.15
2499 3145 4.949856 AGCTTGTAACTTTGGGGTCATATG 59.050 41.667 0.00 0.00 0.00 1.78
2501 3147 4.650972 AGCTTGTAACTTTGGGGTCATA 57.349 40.909 0.00 0.00 0.00 2.15
2503 3149 3.306472 AAGCTTGTAACTTTGGGGTCA 57.694 42.857 0.00 0.00 0.00 4.02
2504 3150 3.634910 TGAAAGCTTGTAACTTTGGGGTC 59.365 43.478 0.00 0.00 37.47 4.46
2505 3151 3.637769 TGAAAGCTTGTAACTTTGGGGT 58.362 40.909 0.00 0.00 37.47 4.95
2506 3152 4.871933 ATGAAAGCTTGTAACTTTGGGG 57.128 40.909 0.00 0.00 37.47 4.96
2509 3155 8.411318 AGAAACAATGAAAGCTTGTAACTTTG 57.589 30.769 0.00 9.37 37.47 2.77
2510 3156 9.435688 AAAGAAACAATGAAAGCTTGTAACTTT 57.564 25.926 0.00 6.83 39.99 2.66
2513 3159 8.968242 CCTAAAGAAACAATGAAAGCTTGTAAC 58.032 33.333 0.00 0.00 35.84 2.50
2515 3161 7.657336 CCCTAAAGAAACAATGAAAGCTTGTA 58.343 34.615 0.00 0.00 35.84 2.41
2516 3162 6.515832 CCCTAAAGAAACAATGAAAGCTTGT 58.484 36.000 0.00 0.00 38.44 3.16
2517 3163 5.406477 GCCCTAAAGAAACAATGAAAGCTTG 59.594 40.000 0.00 0.00 0.00 4.01
2519 3165 4.321230 CGCCCTAAAGAAACAATGAAAGCT 60.321 41.667 0.00 0.00 0.00 3.74
2520 3166 3.920412 CGCCCTAAAGAAACAATGAAAGC 59.080 43.478 0.00 0.00 0.00 3.51
2521 3167 5.121221 ACGCCCTAAAGAAACAATGAAAG 57.879 39.130 0.00 0.00 0.00 2.62
2522 3168 4.319911 CGACGCCCTAAAGAAACAATGAAA 60.320 41.667 0.00 0.00 0.00 2.69
2523 3169 3.187637 CGACGCCCTAAAGAAACAATGAA 59.812 43.478 0.00 0.00 0.00 2.57
2524 3170 2.739913 CGACGCCCTAAAGAAACAATGA 59.260 45.455 0.00 0.00 0.00 2.57
2525 3171 2.727916 GCGACGCCCTAAAGAAACAATG 60.728 50.000 9.14 0.00 0.00 2.82
2526 3172 1.467342 GCGACGCCCTAAAGAAACAAT 59.533 47.619 9.14 0.00 0.00 2.71
2527 3173 0.869730 GCGACGCCCTAAAGAAACAA 59.130 50.000 9.14 0.00 0.00 2.83
2528 3174 0.952010 GGCGACGCCCTAAAGAAACA 60.952 55.000 28.74 0.00 44.06 2.83
2530 3176 4.289312 GGCGACGCCCTAAAGAAA 57.711 55.556 28.74 0.00 44.06 2.52
2540 3186 1.011352 GACGAGTAGTAGGCGACGC 60.011 63.158 12.43 12.43 0.00 5.19
2541 3187 0.301088 CAGACGAGTAGTAGGCGACG 59.699 60.000 0.00 0.00 0.00 5.12
2542 3188 0.656785 CCAGACGAGTAGTAGGCGAC 59.343 60.000 0.00 0.00 0.00 5.19
2543 3189 0.251354 ACCAGACGAGTAGTAGGCGA 59.749 55.000 0.00 0.00 32.95 5.54
2544 3190 0.377554 CACCAGACGAGTAGTAGGCG 59.622 60.000 0.00 0.00 32.95 5.52
2547 3193 5.523188 CCTTACTACACCAGACGAGTAGTAG 59.477 48.000 10.43 0.00 46.18 2.57
2548 3194 5.423015 CCTTACTACACCAGACGAGTAGTA 58.577 45.833 7.40 7.40 44.68 1.82
2550 3196 3.065095 GCCTTACTACACCAGACGAGTAG 59.935 52.174 0.00 0.00 40.70 2.57
2551 3197 3.012518 GCCTTACTACACCAGACGAGTA 58.987 50.000 0.00 0.00 0.00 2.59
2552 3198 1.817447 GCCTTACTACACCAGACGAGT 59.183 52.381 0.00 0.00 0.00 4.18
2553 3199 2.093106 AGCCTTACTACACCAGACGAG 58.907 52.381 0.00 0.00 0.00 4.18
2554 3200 1.816835 CAGCCTTACTACACCAGACGA 59.183 52.381 0.00 0.00 0.00 4.20
2555 3201 1.135083 CCAGCCTTACTACACCAGACG 60.135 57.143 0.00 0.00 0.00 4.18
2556 3202 1.207329 CCCAGCCTTACTACACCAGAC 59.793 57.143 0.00 0.00 0.00 3.51
2558 3204 0.107654 GCCCAGCCTTACTACACCAG 60.108 60.000 0.00 0.00 0.00 4.00
2561 3207 0.323629 TGTGCCCAGCCTTACTACAC 59.676 55.000 0.00 0.00 0.00 2.90
2566 3212 1.211949 TCCTATTGTGCCCAGCCTTAC 59.788 52.381 0.00 0.00 0.00 2.34
2568 3214 0.704076 TTCCTATTGTGCCCAGCCTT 59.296 50.000 0.00 0.00 0.00 4.35
2570 3216 1.780503 ATTTCCTATTGTGCCCAGCC 58.219 50.000 0.00 0.00 0.00 4.85
2571 3217 4.144297 TGATATTTCCTATTGTGCCCAGC 58.856 43.478 0.00 0.00 0.00 4.85
2572 3218 5.771666 ACATGATATTTCCTATTGTGCCCAG 59.228 40.000 0.00 0.00 0.00 4.45
2574 3220 6.942576 AGTACATGATATTTCCTATTGTGCCC 59.057 38.462 0.00 0.00 0.00 5.36
2575 3221 7.986085 AGTACATGATATTTCCTATTGTGCC 57.014 36.000 0.00 0.00 0.00 5.01
2576 3222 9.489084 TGTAGTACATGATATTTCCTATTGTGC 57.511 33.333 0.00 0.00 0.00 4.57
2659 3305 9.851686 TGACAATAAATGAGGCTAATATCAAGT 57.148 29.630 0.00 0.00 0.00 3.16
2663 3309 8.733458 TGCATGACAATAAATGAGGCTAATATC 58.267 33.333 0.00 0.00 0.00 1.63
2664 3310 8.640063 TGCATGACAATAAATGAGGCTAATAT 57.360 30.769 0.00 0.00 0.00 1.28
2665 3311 8.462589 TTGCATGACAATAAATGAGGCTAATA 57.537 30.769 0.00 0.00 31.73 0.98
2666 3312 6.964807 TGCATGACAATAAATGAGGCTAAT 57.035 33.333 0.00 0.00 0.00 1.73
2667 3313 6.602803 TCTTGCATGACAATAAATGAGGCTAA 59.397 34.615 0.00 0.00 37.72 3.09
2668 3314 6.038603 GTCTTGCATGACAATAAATGAGGCTA 59.961 38.462 23.72 0.00 37.72 3.93
2670 3316 5.039333 GTCTTGCATGACAATAAATGAGGC 58.961 41.667 23.72 0.00 37.72 4.70
2671 3317 6.032094 GTGTCTTGCATGACAATAAATGAGG 58.968 40.000 30.38 0.00 46.77 3.86
2672 3318 6.614160 TGTGTCTTGCATGACAATAAATGAG 58.386 36.000 30.38 2.04 46.77 2.90
2673 3319 6.572167 TGTGTCTTGCATGACAATAAATGA 57.428 33.333 30.38 8.64 46.77 2.57
2674 3320 7.821595 AATGTGTCTTGCATGACAATAAATG 57.178 32.000 30.38 0.00 46.77 2.32
2733 3516 3.434167 GCAATGAGGAAATAGAGGGCTGA 60.434 47.826 0.00 0.00 0.00 4.26
2736 3519 2.936202 TGCAATGAGGAAATAGAGGGC 58.064 47.619 0.00 0.00 0.00 5.19
2749 3532 5.447144 GCTTACGTGACACATAATGCAATGA 60.447 40.000 6.37 0.00 0.00 2.57
2754 3537 4.335082 TTGCTTACGTGACACATAATGC 57.665 40.909 6.37 7.48 0.00 3.56
2755 3538 7.325821 ACATTTTTGCTTACGTGACACATAATG 59.674 33.333 6.37 3.94 0.00 1.90
2761 3544 4.844267 AGACATTTTTGCTTACGTGACAC 58.156 39.130 0.00 0.00 0.00 3.67
2764 3547 6.480651 TCAACTAGACATTTTTGCTTACGTGA 59.519 34.615 0.00 0.00 0.00 4.35
2901 3685 9.507329 AGATGTTCTGCTATCTTTTCAGTTTTA 57.493 29.630 0.00 0.00 29.64 1.52
3059 3844 1.347707 ACTTTCGATGAGCCACCTTGA 59.652 47.619 0.00 0.00 0.00 3.02
3074 3859 2.180432 ACGGTAAGGGCTTCACTTTC 57.820 50.000 0.00 0.00 0.00 2.62
3192 3977 0.320073 GGTTCGTGGTTCGTGGATGA 60.320 55.000 0.00 0.00 40.80 2.92
3305 4090 3.253827 GTCATTGCGACGTCGTTTC 57.746 52.632 35.48 21.41 42.22 2.78
3320 4105 2.033602 TGTCCTCGAGCTCCGTCA 59.966 61.111 6.99 0.00 39.75 4.35
3322 4107 2.282251 TGTGTCCTCGAGCTCCGT 60.282 61.111 6.99 0.00 39.75 4.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.