Multiple sequence alignment - TraesCS6B01G098100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G098100 chr6B 100.000 4101 0 0 1 4101 75527342 75523242 0.000000e+00 7574.0
1 TraesCS6B01G098100 chr6B 84.902 1530 194 25 1032 2546 75423484 75421977 0.000000e+00 1511.0
2 TraesCS6B01G098100 chr6B 83.786 1400 151 48 2756 4099 75044692 75043313 0.000000e+00 1258.0
3 TraesCS6B01G098100 chr6B 82.784 1243 142 37 2756 3976 75421394 75420202 0.000000e+00 1044.0
4 TraesCS6B01G098100 chr6B 78.687 1539 257 43 1035 2543 75510362 75508865 0.000000e+00 959.0
5 TraesCS6B01G098100 chr6B 78.528 1467 233 59 987 2398 75514630 75513191 0.000000e+00 889.0
6 TraesCS6B01G098100 chr6B 76.534 1304 245 36 987 2264 75046770 75045502 0.000000e+00 656.0
7 TraesCS6B01G098100 chr6B 83.730 252 27 9 2305 2543 75045498 75045248 4.120000e-55 226.0
8 TraesCS6B01G098100 chr6A 93.470 1945 104 15 617 2543 39671187 39669248 0.000000e+00 2867.0
9 TraesCS6B01G098100 chr6A 93.933 1533 87 5 1017 2543 39628988 39627456 0.000000e+00 2311.0
10 TraesCS6B01G098100 chr6A 96.254 1388 40 6 2723 4101 39669256 39667872 0.000000e+00 2265.0
11 TraesCS6B01G098100 chr6A 93.191 1542 98 6 1009 2543 39581208 39579667 0.000000e+00 2259.0
12 TraesCS6B01G098100 chr6A 95.749 1388 47 6 2723 4101 39579675 39578291 0.000000e+00 2226.0
13 TraesCS6B01G098100 chr6A 95.677 1388 47 7 2723 4101 39627464 39626081 0.000000e+00 2218.0
14 TraesCS6B01G098100 chr6A 79.391 1446 197 65 1015 2388 39878019 39876603 0.000000e+00 926.0
15 TraesCS6B01G098100 chr6A 82.093 860 108 25 1679 2521 39548260 39547430 0.000000e+00 693.0
16 TraesCS6B01G098100 chr6A 86.846 631 70 7 2968 3590 39588760 39588135 0.000000e+00 693.0
17 TraesCS6B01G098100 chr6A 86.529 631 73 6 2968 3590 39546643 39546017 0.000000e+00 684.0
18 TraesCS6B01G098100 chr6A 81.498 881 119 24 1679 2543 39590373 39589521 0.000000e+00 684.0
19 TraesCS6B01G098100 chr6A 82.173 819 107 21 1740 2543 39638109 39637315 0.000000e+00 667.0
20 TraesCS6B01G098100 chr6A 75.380 1381 256 52 987 2325 40543339 40542001 1.270000e-164 590.0
21 TraesCS6B01G098100 chr6A 81.557 488 64 17 3624 4099 39635922 39635449 2.990000e-101 379.0
22 TraesCS6B01G098100 chr6A 81.224 490 63 19 3624 4099 39588130 39587656 6.480000e-98 368.0
23 TraesCS6B01G098100 chr6A 89.205 176 18 1 1 176 39862432 39862258 6.900000e-53 219.0
24 TraesCS6B01G098100 chr6A 86.170 188 23 1 2756 2940 39588943 39588756 2.500000e-47 200.0
25 TraesCS6B01G098100 chr6A 85.714 189 23 2 2756 2940 39636736 39636548 3.230000e-46 196.0
26 TraesCS6B01G098100 chr6A 83.871 93 15 0 2237 2329 34010572 34010664 5.650000e-14 89.8
27 TraesCS6B01G098100 chr6D 94.836 1220 33 7 2756 3950 36083409 36082195 0.000000e+00 1877.0
28 TraesCS6B01G098100 chr6D 95.347 1139 43 3 1412 2543 36084580 36083445 0.000000e+00 1801.0
29 TraesCS6B01G098100 chr6D 85.140 1393 166 28 1062 2438 35717988 35716621 0.000000e+00 1387.0
30 TraesCS6B01G098100 chr6D 84.085 1219 130 36 2756 3952 35715937 35714761 0.000000e+00 1118.0
31 TraesCS6B01G098100 chr6D 80.199 1409 209 45 1032 2398 35667511 35666131 0.000000e+00 992.0
32 TraesCS6B01G098100 chr6D 87.765 850 45 21 607 1417 36090903 36090074 0.000000e+00 939.0
33 TraesCS6B01G098100 chr6D 78.041 1521 247 51 1036 2521 35642070 35640602 0.000000e+00 878.0
34 TraesCS6B01G098100 chr6D 84.920 809 105 14 3305 4101 36072805 36072002 0.000000e+00 802.0
35 TraesCS6B01G098100 chr6D 86.529 631 73 8 2968 3590 35639843 35639217 0.000000e+00 684.0
36 TraesCS6B01G098100 chr6D 81.380 623 90 17 1035 1638 36106099 36105484 6.160000e-133 484.0
37 TraesCS6B01G098100 chr6D 89.655 348 25 6 1 344 36091245 36090905 2.260000e-117 433.0
38 TraesCS6B01G098100 chr6D 82.114 492 61 17 3622 4099 35639213 35638735 2.970000e-106 396.0
39 TraesCS6B01G098100 chr6D 93.125 160 6 3 3942 4101 36082170 36082016 3.190000e-56 230.0
40 TraesCS6B01G098100 chr1D 82.341 974 138 23 1031 1994 37880015 37880964 0.000000e+00 815.0
41 TraesCS6B01G098100 chr1B 81.891 994 148 20 987 1968 57615137 57616110 0.000000e+00 809.0
42 TraesCS6B01G098100 chr1B 79.890 547 76 20 2015 2543 57616196 57616726 1.800000e-98 370.0
43 TraesCS6B01G098100 chr2A 93.585 265 12 3 343 604 614436590 614436328 1.380000e-104 390.0
44 TraesCS6B01G098100 chr2A 95.699 186 2 3 2543 2722 738986340 738986525 1.110000e-75 294.0
45 TraesCS6B01G098100 chr2A 93.229 192 7 1 2539 2724 47763758 47763567 1.120000e-70 278.0
46 TraesCS6B01G098100 chr2A 91.542 201 9 3 2537 2730 711883870 711883671 1.880000e-68 270.0
47 TraesCS6B01G098100 chr3B 93.103 203 7 2 2533 2729 763197646 763197445 1.440000e-74 291.0
48 TraesCS6B01G098100 chr3B 91.045 201 12 1 2534 2728 829790427 829790627 2.430000e-67 267.0
49 TraesCS6B01G098100 chr2B 94.709 189 4 3 2543 2725 37434022 37433834 5.190000e-74 289.0
50 TraesCS6B01G098100 chr2B 88.655 238 22 3 372 606 499584150 499584385 6.710000e-73 285.0
51 TraesCS6B01G098100 chr2B 86.792 106 13 1 343 448 37340217 37340113 2.590000e-22 117.0
52 TraesCS6B01G098100 chr4B 94.118 187 5 3 2542 2722 338505782 338505968 3.120000e-71 279.0
53 TraesCS6B01G098100 chr7B 93.229 192 7 1 2538 2723 245176244 245176053 1.120000e-70 278.0
54 TraesCS6B01G098100 chrUn 91.045 201 12 1 2534 2728 184586175 184586375 2.430000e-67 267.0
55 TraesCS6B01G098100 chrUn 81.226 261 42 6 343 602 42094493 42094239 1.930000e-48 204.0
56 TraesCS6B01G098100 chr5D 83.142 261 37 5 349 606 540293171 540293427 8.870000e-57 231.0
57 TraesCS6B01G098100 chr2D 81.784 269 38 6 343 603 58752838 58752573 8.930000e-52 215.0
58 TraesCS6B01G098100 chr3D 82.927 82 11 2 527 605 613077192 613077111 2.050000e-08 71.3
59 TraesCS6B01G098100 chr3D 92.683 41 3 0 12 52 455951339 455951379 4.430000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G098100 chr6B 75523242 75527342 4100 True 7574.000000 7574 100.0000 1 4101 1 chr6B.!!$R1 4100
1 TraesCS6B01G098100 chr6B 75420202 75423484 3282 True 1277.500000 1511 83.8430 1032 3976 2 chr6B.!!$R3 2944
2 TraesCS6B01G098100 chr6B 75508865 75514630 5765 True 924.000000 959 78.6075 987 2543 2 chr6B.!!$R4 1556
3 TraesCS6B01G098100 chr6B 75043313 75046770 3457 True 713.333333 1258 81.3500 987 4099 3 chr6B.!!$R2 3112
4 TraesCS6B01G098100 chr6A 39667872 39671187 3315 True 2566.000000 2867 94.8620 617 4101 2 chr6A.!!$R9 3484
5 TraesCS6B01G098100 chr6A 39626081 39628988 2907 True 2264.500000 2311 94.8050 1017 4101 2 chr6A.!!$R7 3084
6 TraesCS6B01G098100 chr6A 39578291 39581208 2917 True 2242.500000 2259 94.4700 1009 4101 2 chr6A.!!$R5 3092
7 TraesCS6B01G098100 chr6A 39876603 39878019 1416 True 926.000000 926 79.3910 1015 2388 1 chr6A.!!$R2 1373
8 TraesCS6B01G098100 chr6A 39546017 39548260 2243 True 688.500000 693 84.3110 1679 3590 2 chr6A.!!$R4 1911
9 TraesCS6B01G098100 chr6A 40542001 40543339 1338 True 590.000000 590 75.3800 987 2325 1 chr6A.!!$R3 1338
10 TraesCS6B01G098100 chr6A 39587656 39590373 2717 True 486.250000 693 83.9345 1679 4099 4 chr6A.!!$R6 2420
11 TraesCS6B01G098100 chr6A 39635449 39638109 2660 True 414.000000 667 83.1480 1740 4099 3 chr6A.!!$R8 2359
12 TraesCS6B01G098100 chr6D 36082016 36084580 2564 True 1302.666667 1877 94.4360 1412 4101 3 chr6D.!!$R6 2689
13 TraesCS6B01G098100 chr6D 35714761 35717988 3227 True 1252.500000 1387 84.6125 1062 3952 2 chr6D.!!$R5 2890
14 TraesCS6B01G098100 chr6D 35666131 35667511 1380 True 992.000000 992 80.1990 1032 2398 1 chr6D.!!$R1 1366
15 TraesCS6B01G098100 chr6D 36072002 36072805 803 True 802.000000 802 84.9200 3305 4101 1 chr6D.!!$R2 796
16 TraesCS6B01G098100 chr6D 36090074 36091245 1171 True 686.000000 939 88.7100 1 1417 2 chr6D.!!$R7 1416
17 TraesCS6B01G098100 chr6D 35638735 35642070 3335 True 652.666667 878 82.2280 1036 4099 3 chr6D.!!$R4 3063
18 TraesCS6B01G098100 chr6D 36105484 36106099 615 True 484.000000 484 81.3800 1035 1638 1 chr6D.!!$R3 603
19 TraesCS6B01G098100 chr1D 37880015 37880964 949 False 815.000000 815 82.3410 1031 1994 1 chr1D.!!$F1 963
20 TraesCS6B01G098100 chr1B 57615137 57616726 1589 False 589.500000 809 80.8905 987 2543 2 chr1B.!!$F1 1556

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
442 443 0.103208 AACGAAGAGGGCGCTATGAG 59.897 55.0 7.64 0.77 0.00 2.90 F
546 547 0.242017 AGAGAAAAAGGCATGTGCGC 59.758 50.0 0.00 0.00 43.26 6.09 F
1380 5677 0.250640 GCCATGGCCTCCTACTCATG 60.251 60.0 27.24 0.00 37.37 3.07 F
2607 7072 0.179150 CTCGGAAGAAGTCGAGCCTG 60.179 60.0 0.00 0.00 44.68 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1380 5677 1.149964 GGTACCGCGCTGATTGGTAC 61.150 60.000 24.86 24.86 37.20 3.34 R
1496 5810 2.032634 TGTTGAATGTCTCCGGCGC 61.033 57.895 0.00 0.00 0.00 6.53 R
2634 7099 0.372679 TAGCTTAGTGTCGACTCGCG 59.627 55.000 17.92 0.00 42.69 5.87 R
3720 8846 7.149569 TCCTTCAGAAGACTATTGCATTTTG 57.850 36.000 12.14 0.00 0.00 2.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.261801 CGTCCATCCCAAAATGTAAGACT 58.738 43.478 0.00 0.00 0.00 3.24
42 43 6.542370 CGTCCATCCCAAAATGTAAGACTATT 59.458 38.462 0.00 0.00 0.00 1.73
43 44 7.067008 CGTCCATCCCAAAATGTAAGACTATTT 59.933 37.037 0.00 0.00 0.00 1.40
44 45 8.749354 GTCCATCCCAAAATGTAAGACTATTTT 58.251 33.333 0.00 0.00 37.06 1.82
46 47 9.369904 CCATCCCAAAATGTAAGACTATTTTTG 57.630 33.333 0.00 0.00 35.07 2.44
49 50 9.137459 TCCCAAAATGTAAGACTATTTTTGACA 57.863 29.630 7.74 0.00 35.07 3.58
50 51 9.191995 CCCAAAATGTAAGACTATTTTTGACAC 57.808 33.333 7.74 0.00 35.07 3.67
51 52 9.965824 CCAAAATGTAAGACTATTTTTGACACT 57.034 29.630 7.74 0.00 35.07 3.55
82 83 7.257722 AGTGTCAAAACTGGTCTTACATTTTG 58.742 34.615 0.00 0.00 40.16 2.44
86 87 5.784578 AAACTGGTCTTACATTTTGGGAC 57.215 39.130 0.00 0.00 0.00 4.46
96 97 2.084546 CATTTTGGGACGGAGGAAGTC 58.915 52.381 0.00 0.00 37.86 3.01
112 113 6.059787 AGGAAGTCTCTCTTTGTGCATTAT 57.940 37.500 0.00 0.00 36.40 1.28
115 116 6.036953 GGAAGTCTCTCTTTGTGCATTATCTG 59.963 42.308 0.00 0.00 36.40 2.90
120 121 3.355378 TCTTTGTGCATTATCTGTGGGG 58.645 45.455 0.00 0.00 0.00 4.96
132 133 2.775418 TCTGTGGGGATGGATGTACAT 58.225 47.619 8.43 8.43 0.00 2.29
169 170 1.892474 GGAGGCTAGTAGGAGATGCAG 59.108 57.143 0.00 0.00 0.00 4.41
179 180 1.503542 GAGATGCAGGTTGTTGGCG 59.496 57.895 0.00 0.00 0.00 5.69
236 237 7.441017 TCATTATTGAGGAAAAACAAACTGGG 58.559 34.615 0.00 0.00 0.00 4.45
274 275 3.181451 GGCTCCATAATGTGTCAGATGGA 60.181 47.826 12.45 12.45 44.40 3.41
291 292 2.715046 TGGATTCATGTGCTCTGGTTC 58.285 47.619 0.00 0.00 0.00 3.62
297 298 1.068748 CATGTGCTCTGGTTCTGTTGC 60.069 52.381 0.00 0.00 0.00 4.17
304 305 0.583438 CTGGTTCTGTTGCGTCACAG 59.417 55.000 9.22 9.22 44.96 3.66
307 308 0.316196 GTTCTGTTGCGTCACAGTGC 60.316 55.000 13.70 6.52 44.10 4.40
308 309 1.761244 TTCTGTTGCGTCACAGTGCG 61.761 55.000 13.70 11.59 44.10 5.34
331 332 1.607509 CGGAGATGTCATGGCATCCTC 60.608 57.143 31.58 25.86 44.58 3.71
344 345 7.118971 GTCATGGCATCCTCTAGAAATTGATAC 59.881 40.741 0.00 0.00 0.00 2.24
345 346 6.753913 TGGCATCCTCTAGAAATTGATACT 57.246 37.500 0.00 0.00 0.00 2.12
346 347 6.763355 TGGCATCCTCTAGAAATTGATACTC 58.237 40.000 0.00 0.00 0.00 2.59
347 348 6.169800 GGCATCCTCTAGAAATTGATACTCC 58.830 44.000 0.00 0.00 0.00 3.85
348 349 6.169800 GCATCCTCTAGAAATTGATACTCCC 58.830 44.000 0.00 0.00 0.00 4.30
349 350 6.013812 GCATCCTCTAGAAATTGATACTCCCT 60.014 42.308 0.00 0.00 0.00 4.20
350 351 7.610865 CATCCTCTAGAAATTGATACTCCCTC 58.389 42.308 0.00 0.00 0.00 4.30
351 352 6.078664 TCCTCTAGAAATTGATACTCCCTCC 58.921 44.000 0.00 0.00 0.00 4.30
352 353 6.081356 CCTCTAGAAATTGATACTCCCTCCT 58.919 44.000 0.00 0.00 0.00 3.69
353 354 6.556874 CCTCTAGAAATTGATACTCCCTCCTT 59.443 42.308 0.00 0.00 0.00 3.36
354 355 7.256154 CCTCTAGAAATTGATACTCCCTCCTTC 60.256 44.444 0.00 0.00 0.00 3.46
355 356 5.638530 AGAAATTGATACTCCCTCCTTCC 57.361 43.478 0.00 0.00 0.00 3.46
356 357 4.413851 AGAAATTGATACTCCCTCCTTCCC 59.586 45.833 0.00 0.00 0.00 3.97
357 358 2.961536 TTGATACTCCCTCCTTCCCA 57.038 50.000 0.00 0.00 0.00 4.37
358 359 3.438131 TTGATACTCCCTCCTTCCCAT 57.562 47.619 0.00 0.00 0.00 4.00
359 360 4.569676 TTGATACTCCCTCCTTCCCATA 57.430 45.455 0.00 0.00 0.00 2.74
360 361 4.569676 TGATACTCCCTCCTTCCCATAA 57.430 45.455 0.00 0.00 0.00 1.90
361 362 5.106631 TGATACTCCCTCCTTCCCATAAT 57.893 43.478 0.00 0.00 0.00 1.28
362 363 4.846367 TGATACTCCCTCCTTCCCATAATG 59.154 45.833 0.00 0.00 0.00 1.90
363 364 3.151542 ACTCCCTCCTTCCCATAATGT 57.848 47.619 0.00 0.00 0.00 2.71
364 365 3.474920 ACTCCCTCCTTCCCATAATGTT 58.525 45.455 0.00 0.00 0.00 2.71
365 366 4.641868 ACTCCCTCCTTCCCATAATGTTA 58.358 43.478 0.00 0.00 0.00 2.41
366 367 4.660771 ACTCCCTCCTTCCCATAATGTTAG 59.339 45.833 0.00 0.00 0.00 2.34
367 368 3.980698 TCCCTCCTTCCCATAATGTTAGG 59.019 47.826 0.00 0.00 0.00 2.69
368 369 3.498661 CCCTCCTTCCCATAATGTTAGGC 60.499 52.174 0.00 0.00 0.00 3.93
369 370 3.403038 CTCCTTCCCATAATGTTAGGCG 58.597 50.000 0.00 0.00 0.00 5.52
370 371 2.775384 TCCTTCCCATAATGTTAGGCGT 59.225 45.455 0.00 0.00 0.00 5.68
371 372 3.968649 TCCTTCCCATAATGTTAGGCGTA 59.031 43.478 0.00 0.00 0.00 4.42
372 373 4.595781 TCCTTCCCATAATGTTAGGCGTAT 59.404 41.667 0.00 0.00 0.00 3.06
373 374 5.072600 TCCTTCCCATAATGTTAGGCGTATT 59.927 40.000 0.00 0.00 0.00 1.89
374 375 6.270463 TCCTTCCCATAATGTTAGGCGTATTA 59.730 38.462 0.00 0.00 0.00 0.98
375 376 6.594159 CCTTCCCATAATGTTAGGCGTATTAG 59.406 42.308 0.00 0.00 0.00 1.73
376 377 6.921486 TCCCATAATGTTAGGCGTATTAGA 57.079 37.500 0.00 0.00 0.00 2.10
377 378 7.490657 TCCCATAATGTTAGGCGTATTAGAT 57.509 36.000 0.00 0.00 0.00 1.98
378 379 7.913789 TCCCATAATGTTAGGCGTATTAGATT 58.086 34.615 0.00 0.00 0.00 2.40
379 380 8.038944 TCCCATAATGTTAGGCGTATTAGATTC 58.961 37.037 0.00 0.00 0.00 2.52
380 381 7.822334 CCCATAATGTTAGGCGTATTAGATTCA 59.178 37.037 0.00 0.00 0.00 2.57
381 382 8.873830 CCATAATGTTAGGCGTATTAGATTCAG 58.126 37.037 0.00 0.00 0.00 3.02
382 383 6.787085 AATGTTAGGCGTATTAGATTCAGC 57.213 37.500 0.00 0.00 0.00 4.26
383 384 4.295870 TGTTAGGCGTATTAGATTCAGCG 58.704 43.478 0.00 0.00 0.00 5.18
384 385 1.784525 AGGCGTATTAGATTCAGCGC 58.215 50.000 0.00 0.00 43.46 5.92
385 386 0.435008 GGCGTATTAGATTCAGCGCG 59.565 55.000 0.00 0.00 44.86 6.86
386 387 1.405461 GCGTATTAGATTCAGCGCGA 58.595 50.000 12.10 0.00 35.71 5.87
387 388 1.784856 GCGTATTAGATTCAGCGCGAA 59.215 47.619 12.10 15.06 38.22 4.70
388 389 2.217847 GCGTATTAGATTCAGCGCGAAA 59.782 45.455 12.10 9.05 37.12 3.46
389 390 3.302221 GCGTATTAGATTCAGCGCGAAAA 60.302 43.478 12.10 0.00 37.12 2.29
390 391 4.608445 GCGTATTAGATTCAGCGCGAAAAT 60.608 41.667 12.10 5.40 37.12 1.82
391 392 5.432157 CGTATTAGATTCAGCGCGAAAATT 58.568 37.500 12.10 9.06 37.12 1.82
392 393 6.577800 CGTATTAGATTCAGCGCGAAAATTA 58.422 36.000 12.10 8.31 37.12 1.40
393 394 6.727974 CGTATTAGATTCAGCGCGAAAATTAG 59.272 38.462 12.10 7.70 37.12 1.73
394 395 3.325230 AGATTCAGCGCGAAAATTAGC 57.675 42.857 12.10 0.00 37.12 3.09
404 405 4.531659 GCGAAAATTAGCGTAGGTTCAT 57.468 40.909 0.00 0.00 40.68 2.57
405 406 4.905269 GCGAAAATTAGCGTAGGTTCATT 58.095 39.130 0.00 0.00 40.68 2.57
406 407 5.329493 GCGAAAATTAGCGTAGGTTCATTT 58.671 37.500 0.00 0.00 40.68 2.32
407 408 5.227184 GCGAAAATTAGCGTAGGTTCATTTG 59.773 40.000 0.00 0.00 40.68 2.32
408 409 6.539324 CGAAAATTAGCGTAGGTTCATTTGA 58.461 36.000 0.00 0.00 40.68 2.69
409 410 6.682863 CGAAAATTAGCGTAGGTTCATTTGAG 59.317 38.462 0.00 0.00 40.68 3.02
410 411 5.485662 AATTAGCGTAGGTTCATTTGAGC 57.514 39.130 0.00 0.00 40.68 4.26
411 412 1.359848 AGCGTAGGTTCATTTGAGCG 58.640 50.000 0.00 0.00 27.67 5.03
412 413 1.067142 AGCGTAGGTTCATTTGAGCGA 60.067 47.619 0.00 0.00 27.67 4.93
413 414 1.933853 GCGTAGGTTCATTTGAGCGAT 59.066 47.619 0.00 0.00 0.00 4.58
414 415 2.033662 GCGTAGGTTCATTTGAGCGATC 60.034 50.000 0.00 0.00 0.00 3.69
415 416 2.540101 CGTAGGTTCATTTGAGCGATCC 59.460 50.000 0.00 0.00 0.00 3.36
416 417 2.787473 AGGTTCATTTGAGCGATCCA 57.213 45.000 0.00 0.00 0.00 3.41
417 418 3.071874 AGGTTCATTTGAGCGATCCAA 57.928 42.857 0.00 0.00 0.00 3.53
418 419 3.624777 AGGTTCATTTGAGCGATCCAAT 58.375 40.909 0.00 0.00 0.00 3.16
419 420 3.629398 AGGTTCATTTGAGCGATCCAATC 59.371 43.478 0.00 0.00 0.00 2.67
420 421 3.629398 GGTTCATTTGAGCGATCCAATCT 59.371 43.478 0.00 0.00 0.00 2.40
421 422 4.260948 GGTTCATTTGAGCGATCCAATCTC 60.261 45.833 0.00 0.00 0.00 2.75
422 423 4.141233 TCATTTGAGCGATCCAATCTCA 57.859 40.909 0.00 0.00 35.30 3.27
423 424 4.516323 TCATTTGAGCGATCCAATCTCAA 58.484 39.130 0.00 9.10 42.88 3.02
425 426 4.685169 TTTGAGCGATCCAATCTCAAAC 57.315 40.909 16.48 0.00 46.01 2.93
426 427 2.270923 TGAGCGATCCAATCTCAAACG 58.729 47.619 0.00 0.00 34.30 3.60
427 428 2.094234 TGAGCGATCCAATCTCAAACGA 60.094 45.455 0.00 0.00 34.30 3.85
428 429 2.930040 GAGCGATCCAATCTCAAACGAA 59.070 45.455 0.00 0.00 0.00 3.85
429 430 2.932614 AGCGATCCAATCTCAAACGAAG 59.067 45.455 0.00 0.00 0.00 3.79
430 431 2.930040 GCGATCCAATCTCAAACGAAGA 59.070 45.455 0.00 0.00 0.00 2.87
431 432 3.000724 GCGATCCAATCTCAAACGAAGAG 59.999 47.826 0.00 0.00 34.42 2.85
432 433 3.553511 CGATCCAATCTCAAACGAAGAGG 59.446 47.826 0.00 0.00 33.92 3.69
433 434 3.334583 TCCAATCTCAAACGAAGAGGG 57.665 47.619 0.00 0.00 33.92 4.30
434 435 1.740025 CCAATCTCAAACGAAGAGGGC 59.260 52.381 0.00 0.00 33.92 5.19
435 436 1.394917 CAATCTCAAACGAAGAGGGCG 59.605 52.381 0.00 0.00 33.92 6.13
436 437 0.741221 ATCTCAAACGAAGAGGGCGC 60.741 55.000 0.00 0.00 33.92 6.53
437 438 1.374758 CTCAAACGAAGAGGGCGCT 60.375 57.895 7.64 1.38 0.00 5.92
438 439 0.108804 CTCAAACGAAGAGGGCGCTA 60.109 55.000 7.64 0.00 0.00 4.26
439 440 0.535335 TCAAACGAAGAGGGCGCTAT 59.465 50.000 7.64 0.00 0.00 2.97
440 441 0.652592 CAAACGAAGAGGGCGCTATG 59.347 55.000 7.64 0.00 0.00 2.23
441 442 0.535335 AAACGAAGAGGGCGCTATGA 59.465 50.000 7.64 0.00 0.00 2.15
442 443 0.103208 AACGAAGAGGGCGCTATGAG 59.897 55.000 7.64 0.77 0.00 2.90
443 444 1.663074 CGAAGAGGGCGCTATGAGC 60.663 63.158 7.64 0.00 38.02 4.26
444 445 1.745264 GAAGAGGGCGCTATGAGCT 59.255 57.895 7.64 0.00 39.60 4.09
445 446 0.962489 GAAGAGGGCGCTATGAGCTA 59.038 55.000 7.64 0.00 39.60 3.32
446 447 1.341531 GAAGAGGGCGCTATGAGCTAA 59.658 52.381 7.64 0.00 39.60 3.09
447 448 0.676736 AGAGGGCGCTATGAGCTAAC 59.323 55.000 7.64 0.00 39.60 2.34
448 449 0.676736 GAGGGCGCTATGAGCTAACT 59.323 55.000 7.64 0.00 39.60 2.24
449 450 0.390860 AGGGCGCTATGAGCTAACTG 59.609 55.000 7.64 0.00 39.60 3.16
450 451 1.224722 GGGCGCTATGAGCTAACTGC 61.225 60.000 7.64 0.00 39.60 4.40
451 452 0.530650 GGCGCTATGAGCTAACTGCA 60.531 55.000 7.64 0.00 45.94 4.41
452 453 0.579156 GCGCTATGAGCTAACTGCAC 59.421 55.000 0.00 0.00 45.94 4.57
453 454 0.848942 CGCTATGAGCTAACTGCACG 59.151 55.000 0.00 0.00 45.94 5.34
454 455 1.533965 CGCTATGAGCTAACTGCACGA 60.534 52.381 0.00 0.00 45.94 4.35
455 456 2.123342 GCTATGAGCTAACTGCACGAG 58.877 52.381 0.00 0.00 45.94 4.18
456 457 2.223595 GCTATGAGCTAACTGCACGAGA 60.224 50.000 0.00 0.00 45.94 4.04
457 458 2.575694 ATGAGCTAACTGCACGAGAG 57.424 50.000 0.00 0.00 45.94 3.20
458 459 1.534729 TGAGCTAACTGCACGAGAGA 58.465 50.000 0.00 0.00 45.94 3.10
459 460 2.095461 TGAGCTAACTGCACGAGAGAT 58.905 47.619 0.00 0.00 45.94 2.75
460 461 2.098280 TGAGCTAACTGCACGAGAGATC 59.902 50.000 0.00 0.00 45.94 2.75
461 462 1.407258 AGCTAACTGCACGAGAGATCC 59.593 52.381 0.00 0.00 45.94 3.36
462 463 1.135139 GCTAACTGCACGAGAGATCCA 59.865 52.381 0.00 0.00 42.31 3.41
463 464 2.223923 GCTAACTGCACGAGAGATCCAT 60.224 50.000 0.00 0.00 42.31 3.41
464 465 2.306341 AACTGCACGAGAGATCCATG 57.694 50.000 0.00 0.00 0.00 3.66
465 466 1.189752 ACTGCACGAGAGATCCATGT 58.810 50.000 0.00 0.00 0.00 3.21
466 467 2.379005 ACTGCACGAGAGATCCATGTA 58.621 47.619 0.00 0.00 0.00 2.29
467 468 2.360483 ACTGCACGAGAGATCCATGTAG 59.640 50.000 0.00 0.00 0.00 2.74
468 469 1.067669 TGCACGAGAGATCCATGTAGC 59.932 52.381 0.00 0.00 0.00 3.58
469 470 1.339610 GCACGAGAGATCCATGTAGCT 59.660 52.381 0.00 0.00 0.00 3.32
470 471 2.554462 GCACGAGAGATCCATGTAGCTA 59.446 50.000 0.00 0.00 0.00 3.32
471 472 3.192422 GCACGAGAGATCCATGTAGCTAT 59.808 47.826 0.00 0.00 0.00 2.97
472 473 4.321601 GCACGAGAGATCCATGTAGCTATT 60.322 45.833 0.00 0.00 0.00 1.73
473 474 5.777802 CACGAGAGATCCATGTAGCTATTT 58.222 41.667 0.00 0.00 0.00 1.40
474 475 5.632764 CACGAGAGATCCATGTAGCTATTTG 59.367 44.000 0.00 0.00 0.00 2.32
475 476 5.303078 ACGAGAGATCCATGTAGCTATTTGT 59.697 40.000 0.00 0.00 0.00 2.83
476 477 6.183360 ACGAGAGATCCATGTAGCTATTTGTT 60.183 38.462 0.00 0.00 0.00 2.83
477 478 6.703607 CGAGAGATCCATGTAGCTATTTGTTT 59.296 38.462 0.00 0.00 0.00 2.83
478 479 7.225538 CGAGAGATCCATGTAGCTATTTGTTTT 59.774 37.037 0.00 0.00 0.00 2.43
479 480 8.443953 AGAGATCCATGTAGCTATTTGTTTTC 57.556 34.615 0.00 0.00 0.00 2.29
480 481 7.500559 AGAGATCCATGTAGCTATTTGTTTTCC 59.499 37.037 0.00 0.00 0.00 3.13
481 482 7.349598 AGATCCATGTAGCTATTTGTTTTCCT 58.650 34.615 0.00 0.00 0.00 3.36
482 483 7.836183 AGATCCATGTAGCTATTTGTTTTCCTT 59.164 33.333 0.00 0.00 0.00 3.36
483 484 7.775053 TCCATGTAGCTATTTGTTTTCCTTT 57.225 32.000 0.00 0.00 0.00 3.11
484 485 7.826690 TCCATGTAGCTATTTGTTTTCCTTTC 58.173 34.615 0.00 0.00 0.00 2.62
485 486 7.035612 CCATGTAGCTATTTGTTTTCCTTTCC 58.964 38.462 0.00 0.00 0.00 3.13
486 487 7.309744 CCATGTAGCTATTTGTTTTCCTTTCCA 60.310 37.037 0.00 0.00 0.00 3.53
487 488 7.589958 TGTAGCTATTTGTTTTCCTTTCCAA 57.410 32.000 0.00 0.00 0.00 3.53
488 489 8.012957 TGTAGCTATTTGTTTTCCTTTCCAAA 57.987 30.769 0.00 0.00 0.00 3.28
489 490 8.478877 TGTAGCTATTTGTTTTCCTTTCCAAAA 58.521 29.630 0.00 0.00 31.30 2.44
490 491 9.320352 GTAGCTATTTGTTTTCCTTTCCAAAAA 57.680 29.630 0.00 0.00 31.30 1.94
512 513 6.391227 AAAAACTAGGACTTGTTGGTGATG 57.609 37.500 0.00 0.00 0.00 3.07
513 514 3.703001 ACTAGGACTTGTTGGTGATGG 57.297 47.619 0.00 0.00 0.00 3.51
514 515 2.290323 ACTAGGACTTGTTGGTGATGGC 60.290 50.000 0.00 0.00 0.00 4.40
515 516 0.773644 AGGACTTGTTGGTGATGGCT 59.226 50.000 0.00 0.00 0.00 4.75
516 517 1.168714 GGACTTGTTGGTGATGGCTC 58.831 55.000 0.00 0.00 0.00 4.70
517 518 1.271597 GGACTTGTTGGTGATGGCTCT 60.272 52.381 0.00 0.00 0.00 4.09
518 519 2.027192 GGACTTGTTGGTGATGGCTCTA 60.027 50.000 0.00 0.00 0.00 2.43
519 520 3.559171 GGACTTGTTGGTGATGGCTCTAA 60.559 47.826 0.00 0.00 0.00 2.10
520 521 3.412386 ACTTGTTGGTGATGGCTCTAAC 58.588 45.455 0.00 0.00 31.97 2.34
521 522 3.073062 ACTTGTTGGTGATGGCTCTAACT 59.927 43.478 0.00 0.00 32.39 2.24
522 523 3.057969 TGTTGGTGATGGCTCTAACTG 57.942 47.619 0.00 0.00 32.39 3.16
523 524 2.637382 TGTTGGTGATGGCTCTAACTGA 59.363 45.455 0.00 0.00 32.39 3.41
524 525 3.072330 TGTTGGTGATGGCTCTAACTGAA 59.928 43.478 0.00 0.00 32.39 3.02
525 526 4.263462 TGTTGGTGATGGCTCTAACTGAAT 60.263 41.667 0.00 0.00 32.39 2.57
526 527 3.877559 TGGTGATGGCTCTAACTGAATG 58.122 45.455 0.00 0.00 0.00 2.67
527 528 3.519107 TGGTGATGGCTCTAACTGAATGA 59.481 43.478 0.00 0.00 0.00 2.57
528 529 4.125703 GGTGATGGCTCTAACTGAATGAG 58.874 47.826 0.00 0.00 0.00 2.90
529 530 4.141846 GGTGATGGCTCTAACTGAATGAGA 60.142 45.833 0.00 0.00 0.00 3.27
530 531 5.049167 GTGATGGCTCTAACTGAATGAGAG 58.951 45.833 0.00 0.00 39.82 3.20
531 532 4.958581 TGATGGCTCTAACTGAATGAGAGA 59.041 41.667 2.37 0.00 39.29 3.10
532 533 5.423290 TGATGGCTCTAACTGAATGAGAGAA 59.577 40.000 2.37 0.00 39.29 2.87
533 534 5.745312 TGGCTCTAACTGAATGAGAGAAA 57.255 39.130 2.37 0.00 39.29 2.52
534 535 6.114187 TGGCTCTAACTGAATGAGAGAAAA 57.886 37.500 2.37 0.00 39.29 2.29
535 536 6.533730 TGGCTCTAACTGAATGAGAGAAAAA 58.466 36.000 2.37 0.00 39.29 1.94
536 537 6.652481 TGGCTCTAACTGAATGAGAGAAAAAG 59.348 38.462 2.37 0.00 39.29 2.27
537 538 6.093357 GGCTCTAACTGAATGAGAGAAAAAGG 59.907 42.308 2.37 0.00 39.29 3.11
538 539 6.403092 GCTCTAACTGAATGAGAGAAAAAGGC 60.403 42.308 2.37 0.00 39.29 4.35
539 540 6.533730 TCTAACTGAATGAGAGAAAAAGGCA 58.466 36.000 0.00 0.00 0.00 4.75
540 541 7.170965 TCTAACTGAATGAGAGAAAAAGGCAT 58.829 34.615 0.00 0.00 0.00 4.40
541 542 5.640189 ACTGAATGAGAGAAAAAGGCATG 57.360 39.130 0.00 0.00 0.00 4.06
542 543 5.075493 ACTGAATGAGAGAAAAAGGCATGT 58.925 37.500 0.00 0.00 0.00 3.21
543 544 5.048224 ACTGAATGAGAGAAAAAGGCATGTG 60.048 40.000 0.00 0.00 0.00 3.21
544 545 3.863142 ATGAGAGAAAAAGGCATGTGC 57.137 42.857 0.00 0.00 41.14 4.57
545 546 1.536766 TGAGAGAAAAAGGCATGTGCG 59.463 47.619 0.00 0.00 43.26 5.34
546 547 0.242017 AGAGAAAAAGGCATGTGCGC 59.758 50.000 0.00 0.00 43.26 6.09
557 558 3.193157 GCATGTGCGCCTTAGATTATG 57.807 47.619 4.18 0.00 0.00 1.90
558 559 2.807967 GCATGTGCGCCTTAGATTATGA 59.192 45.455 4.18 0.00 0.00 2.15
559 560 3.250762 GCATGTGCGCCTTAGATTATGAA 59.749 43.478 4.18 0.00 0.00 2.57
560 561 4.261155 GCATGTGCGCCTTAGATTATGAAA 60.261 41.667 4.18 0.00 0.00 2.69
561 562 5.563475 GCATGTGCGCCTTAGATTATGAAAT 60.563 40.000 4.18 0.00 0.00 2.17
562 563 6.441274 CATGTGCGCCTTAGATTATGAAATT 58.559 36.000 4.18 0.00 0.00 1.82
563 564 5.820131 TGTGCGCCTTAGATTATGAAATTG 58.180 37.500 4.18 0.00 0.00 2.32
564 565 4.676924 GTGCGCCTTAGATTATGAAATTGC 59.323 41.667 4.18 0.00 0.00 3.56
565 566 4.337836 TGCGCCTTAGATTATGAAATTGCA 59.662 37.500 4.18 0.00 0.00 4.08
566 567 5.009911 TGCGCCTTAGATTATGAAATTGCAT 59.990 36.000 4.18 3.88 0.00 3.96
567 568 5.344128 GCGCCTTAGATTATGAAATTGCATG 59.656 40.000 9.37 0.00 0.00 4.06
568 569 5.344128 CGCCTTAGATTATGAAATTGCATGC 59.656 40.000 11.82 11.82 0.00 4.06
569 570 6.218019 GCCTTAGATTATGAAATTGCATGCA 58.782 36.000 18.46 18.46 0.00 3.96
570 571 6.702723 GCCTTAGATTATGAAATTGCATGCAA 59.297 34.615 33.57 33.57 40.47 4.08
571 572 7.225145 GCCTTAGATTATGAAATTGCATGCAAA 59.775 33.333 34.84 20.19 39.55 3.68
572 573 9.100554 CCTTAGATTATGAAATTGCATGCAAAA 57.899 29.630 34.84 23.48 39.55 2.44
574 575 7.011828 AGATTATGAAATTGCATGCAAAAGC 57.988 32.000 34.84 24.74 39.55 3.51
575 576 6.821665 AGATTATGAAATTGCATGCAAAAGCT 59.178 30.769 34.84 26.38 39.55 3.74
576 577 6.804770 TTATGAAATTGCATGCAAAAGCTT 57.195 29.167 34.84 23.97 39.55 3.74
577 578 7.902387 TTATGAAATTGCATGCAAAAGCTTA 57.098 28.000 34.84 22.79 39.55 3.09
578 579 6.995511 ATGAAATTGCATGCAAAAGCTTAT 57.004 29.167 34.84 20.71 39.55 1.73
579 580 9.597170 TTATGAAATTGCATGCAAAAGCTTATA 57.403 25.926 34.84 22.99 39.55 0.98
580 581 8.671384 ATGAAATTGCATGCAAAAGCTTATAT 57.329 26.923 34.84 18.35 39.55 0.86
581 582 7.911343 TGAAATTGCATGCAAAAGCTTATATG 58.089 30.769 34.84 3.73 39.55 1.78
582 583 5.917541 ATTGCATGCAAAAGCTTATATGC 57.082 34.783 34.84 20.89 39.55 3.14
583 584 3.719924 TGCATGCAAAAGCTTATATGCC 58.280 40.909 20.30 13.12 39.96 4.40
584 585 3.385433 TGCATGCAAAAGCTTATATGCCT 59.615 39.130 20.30 14.84 39.96 4.75
585 586 4.583907 TGCATGCAAAAGCTTATATGCCTA 59.416 37.500 20.30 11.76 39.96 3.93
586 587 5.068855 TGCATGCAAAAGCTTATATGCCTAA 59.931 36.000 20.30 11.26 39.96 2.69
587 588 5.632347 GCATGCAAAAGCTTATATGCCTAAG 59.368 40.000 21.86 13.33 38.00 2.18
588 589 5.772825 TGCAAAAGCTTATATGCCTAAGG 57.227 39.130 21.86 0.00 38.00 2.69
589 590 5.200483 TGCAAAAGCTTATATGCCTAAGGT 58.800 37.500 21.86 0.00 40.25 3.50
590 591 5.656416 TGCAAAAGCTTATATGCCTAAGGTT 59.344 36.000 21.86 8.55 46.14 3.50
595 596 7.573968 AAGCTTATATGCCTAAGGTTTTGAG 57.426 36.000 0.00 0.00 43.35 3.02
596 597 6.064717 AGCTTATATGCCTAAGGTTTTGAGG 58.935 40.000 6.97 0.00 36.33 3.86
597 598 6.062095 GCTTATATGCCTAAGGTTTTGAGGA 58.938 40.000 0.00 0.00 31.45 3.71
598 599 6.205658 GCTTATATGCCTAAGGTTTTGAGGAG 59.794 42.308 0.00 0.00 31.45 3.69
599 600 2.879103 TGCCTAAGGTTTTGAGGAGG 57.121 50.000 0.00 0.00 31.45 4.30
600 601 1.354368 TGCCTAAGGTTTTGAGGAGGG 59.646 52.381 0.00 0.00 31.45 4.30
601 602 1.633945 GCCTAAGGTTTTGAGGAGGGA 59.366 52.381 0.00 0.00 31.45 4.20
602 603 2.356227 GCCTAAGGTTTTGAGGAGGGAG 60.356 54.545 0.00 0.00 31.45 4.30
603 604 2.913617 CCTAAGGTTTTGAGGAGGGAGT 59.086 50.000 0.00 0.00 31.45 3.85
604 605 4.101856 CCTAAGGTTTTGAGGAGGGAGTA 58.898 47.826 0.00 0.00 31.45 2.59
605 606 4.534897 CCTAAGGTTTTGAGGAGGGAGTAA 59.465 45.833 0.00 0.00 31.45 2.24
610 611 5.791141 AGGTTTTGAGGAGGGAGTAAGTTAT 59.209 40.000 0.00 0.00 0.00 1.89
612 613 7.125963 AGGTTTTGAGGAGGGAGTAAGTTATAG 59.874 40.741 0.00 0.00 0.00 1.31
641 642 3.072038 AGAGCAGATAAGCCATGCACATA 59.928 43.478 0.00 0.00 42.45 2.29
673 674 3.942829 AGCTCATCGTCAAATCTGGAAA 58.057 40.909 0.00 0.00 0.00 3.13
685 686 9.045223 CGTCAAATCTGGAAATTGTCTATGATA 57.955 33.333 0.00 0.00 0.00 2.15
702 703 2.361119 TGATAGCGTGTGGTCTATGGTC 59.639 50.000 0.00 0.00 0.00 4.02
736 737 2.435372 TGGCTCACCACTGAAACTTT 57.565 45.000 0.00 0.00 42.67 2.66
769 783 7.519032 TTGTTGATTTTAGGGGAGTTGTAAG 57.481 36.000 0.00 0.00 0.00 2.34
905 920 2.907042 ACTTTAGCTGTAGTGGGCTCTT 59.093 45.455 0.00 0.00 39.65 2.85
915 930 3.748645 AGTGGGCTCTTTCTCTCTCTA 57.251 47.619 0.00 0.00 0.00 2.43
951 994 4.096681 TGAGTCTTGGGCTTCTATCTCAA 58.903 43.478 0.00 0.00 0.00 3.02
1007 1050 1.281867 CACCACTTTCCCCATGAGCTA 59.718 52.381 0.00 0.00 0.00 3.32
1247 5522 0.889306 CCTCTCCTCGGTTTCTTCGT 59.111 55.000 0.00 0.00 0.00 3.85
1317 5607 1.003696 GGCTACTTCTCCTTGTGCCTT 59.996 52.381 0.00 0.00 36.32 4.35
1321 5611 1.202818 ACTTCTCCTTGTGCCTTGACC 60.203 52.381 0.00 0.00 0.00 4.02
1380 5677 0.250640 GCCATGGCCTCCTACTCATG 60.251 60.000 27.24 0.00 37.37 3.07
1388 5685 3.244249 GGCCTCCTACTCATGTACCAATC 60.244 52.174 0.00 0.00 0.00 2.67
1522 5836 1.464997 GAGACATTCAACACTTCCGGC 59.535 52.381 0.00 0.00 0.00 6.13
1671 6039 7.038587 ACCAAGAGTCACATGTACTTTACCATA 60.039 37.037 0.00 0.00 0.00 2.74
1715 6083 4.084013 CCTTTACTGGTTGTTCGATGACAC 60.084 45.833 0.00 0.00 0.00 3.67
1957 6334 4.141711 TGCTAGGAAGAACTGTTGAACTGT 60.142 41.667 0.00 1.78 0.00 3.55
2292 6733 9.201127 GTAAGTAGTTCCATATAAATCGGTTCC 57.799 37.037 0.00 0.00 0.00 3.62
2425 6878 2.495669 AGCTAACCAGTTCTGCTCTCTC 59.504 50.000 5.48 0.00 30.51 3.20
2447 6900 6.269077 TCTCGAGAGGTGATTCTACTCTATCT 59.731 42.308 12.08 0.00 41.38 1.98
2501 6957 8.430063 GTTGTGCATCTCATTTGTCAAAAATAG 58.570 33.333 1.31 0.93 0.00 1.73
2548 7013 8.579850 TTTTTGCTATTCTCATACTCATGGTT 57.420 30.769 0.00 0.00 32.61 3.67
2549 7014 8.579850 TTTTGCTATTCTCATACTCATGGTTT 57.420 30.769 0.00 0.00 32.61 3.27
2550 7015 8.579850 TTTGCTATTCTCATACTCATGGTTTT 57.420 30.769 0.00 0.00 32.61 2.43
2551 7016 7.792374 TGCTATTCTCATACTCATGGTTTTC 57.208 36.000 0.00 0.00 32.61 2.29
2552 7017 6.479990 TGCTATTCTCATACTCATGGTTTTCG 59.520 38.462 0.00 0.00 32.61 3.46
2553 7018 6.701841 GCTATTCTCATACTCATGGTTTTCGA 59.298 38.462 0.00 0.00 32.61 3.71
2554 7019 7.095857 GCTATTCTCATACTCATGGTTTTCGAG 60.096 40.741 0.00 0.00 32.61 4.04
2555 7020 5.661056 TCTCATACTCATGGTTTTCGAGT 57.339 39.130 0.00 0.00 42.49 4.18
2556 7021 5.651530 TCTCATACTCATGGTTTTCGAGTC 58.348 41.667 0.00 0.00 40.41 3.36
2557 7022 4.421058 TCATACTCATGGTTTTCGAGTCG 58.579 43.478 6.09 6.09 40.41 4.18
2558 7023 1.429463 ACTCATGGTTTTCGAGTCGC 58.571 50.000 7.92 0.00 35.02 5.19
2559 7024 0.366871 CTCATGGTTTTCGAGTCGCG 59.633 55.000 7.92 0.00 42.69 5.87
2584 7049 4.504916 CGAGTCGCTCTGGGGCAG 62.505 72.222 0.00 0.00 0.00 4.85
2585 7050 4.828925 GAGTCGCTCTGGGGCAGC 62.829 72.222 0.00 0.00 0.00 5.25
2590 7055 4.828925 GCTCTGGGGCAGCGACTC 62.829 72.222 0.00 0.00 0.00 3.36
2591 7056 4.504916 CTCTGGGGCAGCGACTCG 62.505 72.222 0.00 0.00 0.00 4.18
2595 7060 4.821589 GGGGCAGCGACTCGGAAG 62.822 72.222 0.00 0.00 0.00 3.46
2596 7061 3.760035 GGGCAGCGACTCGGAAGA 61.760 66.667 0.00 0.00 39.12 2.87
2597 7062 2.261671 GGCAGCGACTCGGAAGAA 59.738 61.111 0.00 0.00 41.32 2.52
2598 7063 1.807573 GGCAGCGACTCGGAAGAAG 60.808 63.158 0.00 0.00 41.32 2.85
2599 7064 1.080434 GCAGCGACTCGGAAGAAGT 60.080 57.895 0.00 0.00 41.32 3.01
2600 7065 1.073768 GCAGCGACTCGGAAGAAGTC 61.074 60.000 0.00 0.00 41.32 3.01
2605 7070 4.796225 CTCGGAAGAAGTCGAGCC 57.204 61.111 0.00 0.00 44.68 4.70
2606 7071 2.185238 CTCGGAAGAAGTCGAGCCT 58.815 57.895 0.00 0.00 44.68 4.58
2607 7072 0.179150 CTCGGAAGAAGTCGAGCCTG 60.179 60.000 0.00 0.00 44.68 4.85
2608 7073 1.807573 CGGAAGAAGTCGAGCCTGC 60.808 63.158 0.00 0.00 0.00 4.85
2609 7074 1.807573 GGAAGAAGTCGAGCCTGCG 60.808 63.158 0.00 0.00 0.00 5.18
2610 7075 1.080434 GAAGAAGTCGAGCCTGCGT 60.080 57.895 0.00 0.00 0.00 5.24
2611 7076 0.667792 GAAGAAGTCGAGCCTGCGTT 60.668 55.000 0.00 0.00 0.00 4.84
2612 7077 0.946221 AAGAAGTCGAGCCTGCGTTG 60.946 55.000 0.00 0.00 0.00 4.10
2613 7078 1.664965 GAAGTCGAGCCTGCGTTGT 60.665 57.895 0.00 0.00 0.00 3.32
2614 7079 1.891060 GAAGTCGAGCCTGCGTTGTG 61.891 60.000 0.00 0.00 0.00 3.33
2615 7080 2.355837 GTCGAGCCTGCGTTGTGA 60.356 61.111 0.00 0.00 0.00 3.58
2616 7081 2.355837 TCGAGCCTGCGTTGTGAC 60.356 61.111 0.00 0.00 0.00 3.67
2617 7082 2.356313 CGAGCCTGCGTTGTGACT 60.356 61.111 0.00 0.00 0.00 3.41
2618 7083 2.661566 CGAGCCTGCGTTGTGACTG 61.662 63.158 0.00 0.00 0.00 3.51
2619 7084 2.281070 AGCCTGCGTTGTGACTGG 60.281 61.111 0.00 0.00 0.00 4.00
2620 7085 2.591715 GCCTGCGTTGTGACTGGT 60.592 61.111 0.00 0.00 0.00 4.00
2621 7086 2.607892 GCCTGCGTTGTGACTGGTC 61.608 63.158 0.00 0.00 0.00 4.02
2622 7087 2.310233 CCTGCGTTGTGACTGGTCG 61.310 63.158 0.00 0.00 0.00 4.79
2623 7088 2.943345 CTGCGTTGTGACTGGTCGC 61.943 63.158 7.27 7.27 45.70 5.19
2624 7089 4.059459 GCGTTGTGACTGGTCGCG 62.059 66.667 0.00 0.00 42.66 5.87
2625 7090 2.354188 CGTTGTGACTGGTCGCGA 60.354 61.111 3.71 3.71 42.66 5.87
2626 7091 2.645510 CGTTGTGACTGGTCGCGAC 61.646 63.158 30.67 30.67 46.06 5.19
2627 7092 1.299926 GTTGTGACTGGTCGCGACT 60.300 57.895 35.50 19.05 46.04 4.18
2628 7093 1.007734 TTGTGACTGGTCGCGACTC 60.008 57.895 35.50 25.95 42.66 3.36
2629 7094 1.730451 TTGTGACTGGTCGCGACTCA 61.730 55.000 35.50 28.08 42.66 3.41
2630 7095 1.442857 GTGACTGGTCGCGACTCAG 60.443 63.158 35.46 35.46 36.41 3.35
2631 7096 2.179517 GACTGGTCGCGACTCAGG 59.820 66.667 37.53 27.42 35.40 3.86
2632 7097 3.343788 GACTGGTCGCGACTCAGGG 62.344 68.421 37.53 25.84 35.40 4.45
2633 7098 3.374402 CTGGTCGCGACTCAGGGT 61.374 66.667 35.50 0.00 0.00 4.34
2634 7099 3.343788 CTGGTCGCGACTCAGGGTC 62.344 68.421 35.50 19.20 41.28 4.46
2642 7107 3.384014 GACTCAGGGTCGCGAGTCG 62.384 68.421 10.24 8.54 46.20 4.18
2643 7108 3.125573 CTCAGGGTCGCGAGTCGA 61.126 66.667 18.61 2.86 46.29 4.20
2651 7116 1.134075 TCGCGAGTCGACACTAAGC 59.866 57.895 18.61 13.51 43.16 3.09
2652 7117 1.134901 CGCGAGTCGACACTAAGCT 59.865 57.895 18.61 0.00 41.67 3.74
2653 7118 0.372679 CGCGAGTCGACACTAAGCTA 59.627 55.000 18.61 0.00 41.67 3.32
2654 7119 1.201998 CGCGAGTCGACACTAAGCTAA 60.202 52.381 18.61 0.00 41.67 3.09
2655 7120 2.442424 GCGAGTCGACACTAAGCTAAG 58.558 52.381 18.61 0.00 34.91 2.18
2656 7121 2.159544 GCGAGTCGACACTAAGCTAAGT 60.160 50.000 18.61 0.00 34.91 2.24
2657 7122 3.672310 CGAGTCGACACTAAGCTAAGTC 58.328 50.000 19.50 0.51 30.63 3.01
2662 7127 3.844577 GACACTAAGCTAAGTCGACCA 57.155 47.619 13.01 0.00 0.00 4.02
2663 7128 4.373348 GACACTAAGCTAAGTCGACCAT 57.627 45.455 13.01 4.13 0.00 3.55
2664 7129 5.496133 GACACTAAGCTAAGTCGACCATA 57.504 43.478 13.01 5.20 0.00 2.74
2665 7130 6.074544 GACACTAAGCTAAGTCGACCATAT 57.925 41.667 13.01 0.00 0.00 1.78
2666 7131 6.466885 ACACTAAGCTAAGTCGACCATATT 57.533 37.500 13.01 2.15 0.00 1.28
2667 7132 6.875076 ACACTAAGCTAAGTCGACCATATTT 58.125 36.000 13.01 1.74 0.00 1.40
2668 7133 7.328737 ACACTAAGCTAAGTCGACCATATTTT 58.671 34.615 13.01 0.94 0.00 1.82
2669 7134 7.822822 ACACTAAGCTAAGTCGACCATATTTTT 59.177 33.333 13.01 0.14 0.00 1.94
2670 7135 8.116753 CACTAAGCTAAGTCGACCATATTTTTG 58.883 37.037 13.01 1.06 0.00 2.44
2671 7136 5.485662 AGCTAAGTCGACCATATTTTTGC 57.514 39.130 13.01 11.15 0.00 3.68
2672 7137 4.034048 AGCTAAGTCGACCATATTTTTGCG 59.966 41.667 13.01 0.00 0.00 4.85
2673 7138 4.033587 GCTAAGTCGACCATATTTTTGCGA 59.966 41.667 13.01 0.00 0.00 5.10
2674 7139 4.336532 AAGTCGACCATATTTTTGCGAC 57.663 40.909 13.01 0.00 45.83 5.19
2676 7141 3.924610 GTCGACCATATTTTTGCGACTC 58.075 45.455 3.51 0.00 43.18 3.36
2677 7142 3.369756 GTCGACCATATTTTTGCGACTCA 59.630 43.478 3.51 0.00 43.18 3.41
2678 7143 4.034048 GTCGACCATATTTTTGCGACTCAT 59.966 41.667 3.51 0.00 43.18 2.90
2679 7144 5.233476 GTCGACCATATTTTTGCGACTCATA 59.767 40.000 3.51 0.00 43.18 2.15
2680 7145 5.462068 TCGACCATATTTTTGCGACTCATAG 59.538 40.000 0.00 0.00 0.00 2.23
2681 7146 5.462068 CGACCATATTTTTGCGACTCATAGA 59.538 40.000 0.00 0.00 0.00 1.98
2682 7147 6.562270 CGACCATATTTTTGCGACTCATAGAC 60.562 42.308 0.00 0.00 0.00 2.59
2683 7148 6.349300 ACCATATTTTTGCGACTCATAGACT 58.651 36.000 0.00 0.00 0.00 3.24
2684 7149 7.497595 ACCATATTTTTGCGACTCATAGACTA 58.502 34.615 0.00 0.00 0.00 2.59
2685 7150 7.653713 ACCATATTTTTGCGACTCATAGACTAG 59.346 37.037 0.00 0.00 0.00 2.57
2686 7151 7.653713 CCATATTTTTGCGACTCATAGACTAGT 59.346 37.037 0.00 0.00 0.00 2.57
2687 7152 8.695284 CATATTTTTGCGACTCATAGACTAGTC 58.305 37.037 15.41 15.41 39.00 2.59
2720 7185 3.999229 GTCGAGCGACTCAAAATTCAT 57.001 42.857 15.13 0.00 41.57 2.57
2721 7186 3.663908 GTCGAGCGACTCAAAATTCATG 58.336 45.455 15.13 0.00 41.57 3.07
2722 7187 2.094258 TCGAGCGACTCAAAATTCATGC 59.906 45.455 7.47 0.00 0.00 4.06
2723 7188 2.094894 CGAGCGACTCAAAATTCATGCT 59.905 45.455 7.47 0.00 0.00 3.79
2724 7189 3.678662 GAGCGACTCAAAATTCATGCTC 58.321 45.455 0.00 0.00 40.50 4.26
2725 7190 3.076621 AGCGACTCAAAATTCATGCTCA 58.923 40.909 0.00 0.00 0.00 4.26
2726 7191 3.693085 AGCGACTCAAAATTCATGCTCAT 59.307 39.130 0.00 0.00 0.00 2.90
2727 7192 4.877823 AGCGACTCAAAATTCATGCTCATA 59.122 37.500 0.00 0.00 0.00 2.15
2728 7193 4.966366 GCGACTCAAAATTCATGCTCATAC 59.034 41.667 0.00 0.00 0.00 2.39
2729 7194 5.220739 GCGACTCAAAATTCATGCTCATACT 60.221 40.000 0.00 0.00 0.00 2.12
2730 7195 6.417327 CGACTCAAAATTCATGCTCATACTC 58.583 40.000 0.00 0.00 0.00 2.59
2734 7199 8.887717 ACTCAAAATTCATGCTCATACTCTTAC 58.112 33.333 0.00 0.00 0.00 2.34
3327 8430 7.340999 ACAAGTAATTGATACCCAACAATACCC 59.659 37.037 10.35 0.00 37.63 3.69
3400 8505 6.183360 TGCATTTCATATTGCTGTTCATTTGC 60.183 34.615 0.00 0.00 39.60 3.68
3483 8589 7.096477 GCAGTTTGCCTAAATATTTTATCAGCG 60.096 37.037 5.91 0.00 37.42 5.18
3720 8846 2.009774 AGCATGACCGCAATGTCTAAC 58.990 47.619 0.00 0.00 36.21 2.34
3846 8981 9.188588 CTGATTATGTGATATTGAAAACATGCC 57.811 33.333 0.00 0.00 35.07 4.40
3943 9080 8.698973 TTCACCCTTGATTTGTAACTGAATTA 57.301 30.769 0.00 0.00 0.00 1.40
4008 9177 8.771920 TTATACTGTGTGAAGGTTCTATGTTG 57.228 34.615 0.00 0.00 0.00 3.33
4090 9280 5.011840 GGACTATGGTCTTCCCTAATACCAC 59.988 48.000 9.27 0.00 42.66 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 7.881775 AATAGTCTTACATTTTGGGATGGAC 57.118 36.000 0.00 0.00 0.00 4.02
50 51 5.710984 AGACCAGTTTTGACACTACGATAG 58.289 41.667 0.00 0.00 46.19 2.08
51 52 5.717078 AGACCAGTTTTGACACTACGATA 57.283 39.130 0.00 0.00 0.00 2.92
52 53 4.602340 AGACCAGTTTTGACACTACGAT 57.398 40.909 0.00 0.00 0.00 3.73
53 54 4.395959 AAGACCAGTTTTGACACTACGA 57.604 40.909 0.00 0.00 0.00 3.43
54 55 5.045215 TGTAAGACCAGTTTTGACACTACG 58.955 41.667 0.00 0.00 0.00 3.51
55 56 7.492352 AATGTAAGACCAGTTTTGACACTAC 57.508 36.000 0.00 0.00 0.00 2.73
70 71 3.007635 CCTCCGTCCCAAAATGTAAGAC 58.992 50.000 0.00 0.00 0.00 3.01
82 83 0.033894 AGAGAGACTTCCTCCGTCCC 60.034 60.000 0.00 0.00 42.97 4.46
86 87 2.928731 GCACAAAGAGAGACTTCCTCCG 60.929 54.545 0.00 0.00 42.97 4.63
96 97 4.334759 CCCACAGATAATGCACAAAGAGAG 59.665 45.833 0.00 0.00 0.00 3.20
112 113 2.262266 TGTACATCCATCCCCACAGA 57.738 50.000 0.00 0.00 0.00 3.41
115 116 2.172505 TGTCATGTACATCCATCCCCAC 59.827 50.000 5.07 0.00 31.43 4.61
132 133 2.505407 CCTCCTACCAACCATGATGTCA 59.495 50.000 0.00 0.00 0.00 3.58
140 141 2.358932 CCTACTAGCCTCCTACCAACCA 60.359 54.545 0.00 0.00 0.00 3.67
145 146 3.692690 CATCTCCTACTAGCCTCCTACC 58.307 54.545 0.00 0.00 0.00 3.18
169 170 1.805428 AAGCCATCACGCCAACAACC 61.805 55.000 0.00 0.00 0.00 3.77
179 180 3.435105 TTGTTTCACACAAGCCATCAC 57.565 42.857 0.00 0.00 40.71 3.06
231 232 1.446016 ACTACAAAAGCCCTCCCAGT 58.554 50.000 0.00 0.00 0.00 4.00
236 237 1.813178 GAGCCAACTACAAAAGCCCTC 59.187 52.381 0.00 0.00 0.00 4.30
274 275 3.430042 ACAGAACCAGAGCACATGAAT 57.570 42.857 0.00 0.00 0.00 2.57
297 298 4.337060 TCCGACCGCACTGTGACG 62.337 66.667 12.86 13.96 0.00 4.35
304 305 1.141881 ATGACATCTCCGACCGCAC 59.858 57.895 0.00 0.00 0.00 5.34
307 308 1.592669 GCCATGACATCTCCGACCG 60.593 63.158 0.00 0.00 0.00 4.79
308 309 0.107456 ATGCCATGACATCTCCGACC 59.893 55.000 0.00 0.00 0.00 4.79
331 332 6.239743 GGGAAGGAGGGAGTATCAATTTCTAG 60.240 46.154 0.00 0.00 36.25 2.43
344 345 4.042187 CCTAACATTATGGGAAGGAGGGAG 59.958 50.000 0.00 0.00 0.00 4.30
345 346 3.980698 CCTAACATTATGGGAAGGAGGGA 59.019 47.826 0.00 0.00 0.00 4.20
346 347 3.498661 GCCTAACATTATGGGAAGGAGGG 60.499 52.174 12.03 0.00 0.00 4.30
347 348 3.756117 GCCTAACATTATGGGAAGGAGG 58.244 50.000 12.03 3.90 0.00 4.30
348 349 3.181454 ACGCCTAACATTATGGGAAGGAG 60.181 47.826 12.03 11.09 0.00 3.69
349 350 2.775384 ACGCCTAACATTATGGGAAGGA 59.225 45.455 12.03 0.00 0.00 3.36
350 351 3.208747 ACGCCTAACATTATGGGAAGG 57.791 47.619 0.00 1.59 0.00 3.46
351 352 7.383687 TCTAATACGCCTAACATTATGGGAAG 58.616 38.462 0.00 0.00 0.00 3.46
352 353 7.305813 TCTAATACGCCTAACATTATGGGAA 57.694 36.000 0.00 0.00 0.00 3.97
353 354 6.921486 TCTAATACGCCTAACATTATGGGA 57.079 37.500 0.00 0.00 0.00 4.37
354 355 7.822334 TGAATCTAATACGCCTAACATTATGGG 59.178 37.037 0.00 0.00 0.00 4.00
355 356 8.771920 TGAATCTAATACGCCTAACATTATGG 57.228 34.615 0.00 0.00 0.00 2.74
356 357 8.383619 GCTGAATCTAATACGCCTAACATTATG 58.616 37.037 0.00 0.00 0.00 1.90
357 358 7.275779 CGCTGAATCTAATACGCCTAACATTAT 59.724 37.037 0.00 0.00 0.00 1.28
358 359 6.584942 CGCTGAATCTAATACGCCTAACATTA 59.415 38.462 0.00 0.00 0.00 1.90
359 360 5.405571 CGCTGAATCTAATACGCCTAACATT 59.594 40.000 0.00 0.00 0.00 2.71
360 361 4.923871 CGCTGAATCTAATACGCCTAACAT 59.076 41.667 0.00 0.00 0.00 2.71
361 362 4.295870 CGCTGAATCTAATACGCCTAACA 58.704 43.478 0.00 0.00 0.00 2.41
362 363 3.121445 GCGCTGAATCTAATACGCCTAAC 59.879 47.826 0.00 0.00 40.43 2.34
363 364 3.314553 GCGCTGAATCTAATACGCCTAA 58.685 45.455 0.00 0.00 40.43 2.69
364 365 2.667448 CGCGCTGAATCTAATACGCCTA 60.667 50.000 5.56 0.00 43.15 3.93
365 366 1.784525 GCGCTGAATCTAATACGCCT 58.215 50.000 0.00 0.00 40.43 5.52
366 367 0.435008 CGCGCTGAATCTAATACGCC 59.565 55.000 5.56 0.00 43.15 5.68
367 368 1.405461 TCGCGCTGAATCTAATACGC 58.595 50.000 5.56 0.00 42.69 4.42
368 369 4.431894 TTTTCGCGCTGAATCTAATACG 57.568 40.909 5.56 0.00 36.22 3.06
369 370 6.516695 GCTAATTTTCGCGCTGAATCTAATAC 59.483 38.462 5.56 0.00 36.22 1.89
370 371 6.590357 GCTAATTTTCGCGCTGAATCTAATA 58.410 36.000 5.56 0.00 36.22 0.98
371 372 5.444122 GCTAATTTTCGCGCTGAATCTAAT 58.556 37.500 5.56 5.36 36.22 1.73
372 373 4.550063 CGCTAATTTTCGCGCTGAATCTAA 60.550 41.667 5.56 3.20 43.01 2.10
373 374 3.060540 CGCTAATTTTCGCGCTGAATCTA 60.061 43.478 5.56 0.81 43.01 1.98
374 375 2.285834 CGCTAATTTTCGCGCTGAATCT 60.286 45.455 5.56 1.75 43.01 2.40
375 376 2.029815 CGCTAATTTTCGCGCTGAATC 58.970 47.619 5.56 0.00 43.01 2.52
376 377 2.091152 CGCTAATTTTCGCGCTGAAT 57.909 45.000 5.56 0.00 43.01 2.57
377 378 3.578868 CGCTAATTTTCGCGCTGAA 57.421 47.368 5.56 8.28 43.01 3.02
383 384 4.531659 ATGAACCTACGCTAATTTTCGC 57.468 40.909 0.00 0.00 0.00 4.70
384 385 6.539324 TCAAATGAACCTACGCTAATTTTCG 58.461 36.000 0.00 0.00 0.00 3.46
385 386 6.469275 GCTCAAATGAACCTACGCTAATTTTC 59.531 38.462 0.00 0.00 0.00 2.29
386 387 6.322491 GCTCAAATGAACCTACGCTAATTTT 58.678 36.000 0.00 0.00 0.00 1.82
387 388 5.447279 CGCTCAAATGAACCTACGCTAATTT 60.447 40.000 0.00 0.00 0.00 1.82
388 389 4.034048 CGCTCAAATGAACCTACGCTAATT 59.966 41.667 0.00 0.00 0.00 1.40
389 390 3.555956 CGCTCAAATGAACCTACGCTAAT 59.444 43.478 0.00 0.00 0.00 1.73
390 391 2.927477 CGCTCAAATGAACCTACGCTAA 59.073 45.455 0.00 0.00 0.00 3.09
391 392 2.164827 TCGCTCAAATGAACCTACGCTA 59.835 45.455 0.00 0.00 0.00 4.26
392 393 1.067142 TCGCTCAAATGAACCTACGCT 60.067 47.619 0.00 0.00 0.00 5.07
393 394 1.355971 TCGCTCAAATGAACCTACGC 58.644 50.000 0.00 0.00 0.00 4.42
394 395 2.540101 GGATCGCTCAAATGAACCTACG 59.460 50.000 0.00 0.00 0.00 3.51
395 396 3.531538 TGGATCGCTCAAATGAACCTAC 58.468 45.455 0.00 0.00 0.00 3.18
396 397 3.904800 TGGATCGCTCAAATGAACCTA 57.095 42.857 0.00 0.00 0.00 3.08
397 398 2.787473 TGGATCGCTCAAATGAACCT 57.213 45.000 0.00 0.00 0.00 3.50
398 399 3.629398 AGATTGGATCGCTCAAATGAACC 59.371 43.478 0.00 0.00 0.00 3.62
399 400 4.333649 TGAGATTGGATCGCTCAAATGAAC 59.666 41.667 0.00 0.00 35.87 3.18
400 401 4.516323 TGAGATTGGATCGCTCAAATGAA 58.484 39.130 0.00 0.00 35.87 2.57
401 402 4.141233 TGAGATTGGATCGCTCAAATGA 57.859 40.909 0.00 0.00 35.87 2.57
402 403 4.888038 TTGAGATTGGATCGCTCAAATG 57.112 40.909 13.21 0.00 43.41 2.32
405 406 2.672874 CGTTTGAGATTGGATCGCTCAA 59.327 45.455 12.16 12.16 44.33 3.02
406 407 2.094234 TCGTTTGAGATTGGATCGCTCA 60.094 45.455 0.00 0.00 36.92 4.26
407 408 2.540515 TCGTTTGAGATTGGATCGCTC 58.459 47.619 0.00 0.00 0.00 5.03
408 409 2.672961 TCGTTTGAGATTGGATCGCT 57.327 45.000 0.00 0.00 0.00 4.93
409 410 2.930040 TCTTCGTTTGAGATTGGATCGC 59.070 45.455 0.00 0.00 0.00 4.58
410 411 3.553511 CCTCTTCGTTTGAGATTGGATCG 59.446 47.826 0.00 0.00 33.68 3.69
411 412 3.873952 CCCTCTTCGTTTGAGATTGGATC 59.126 47.826 0.00 0.00 33.68 3.36
412 413 3.878778 CCCTCTTCGTTTGAGATTGGAT 58.121 45.455 0.00 0.00 33.68 3.41
413 414 2.615493 GCCCTCTTCGTTTGAGATTGGA 60.615 50.000 0.00 0.00 33.68 3.53
414 415 1.740025 GCCCTCTTCGTTTGAGATTGG 59.260 52.381 0.00 0.00 33.68 3.16
415 416 1.394917 CGCCCTCTTCGTTTGAGATTG 59.605 52.381 0.00 0.00 33.68 2.67
416 417 1.726853 CGCCCTCTTCGTTTGAGATT 58.273 50.000 0.00 0.00 33.68 2.40
417 418 0.741221 GCGCCCTCTTCGTTTGAGAT 60.741 55.000 0.00 0.00 33.68 2.75
418 419 1.374252 GCGCCCTCTTCGTTTGAGA 60.374 57.895 0.00 0.00 33.68 3.27
419 420 0.108804 TAGCGCCCTCTTCGTTTGAG 60.109 55.000 2.29 0.00 0.00 3.02
420 421 0.535335 ATAGCGCCCTCTTCGTTTGA 59.465 50.000 2.29 0.00 0.00 2.69
421 422 0.652592 CATAGCGCCCTCTTCGTTTG 59.347 55.000 2.29 0.00 0.00 2.93
422 423 0.535335 TCATAGCGCCCTCTTCGTTT 59.465 50.000 2.29 0.00 0.00 3.60
423 424 0.103208 CTCATAGCGCCCTCTTCGTT 59.897 55.000 2.29 0.00 0.00 3.85
424 425 1.736586 CTCATAGCGCCCTCTTCGT 59.263 57.895 2.29 0.00 0.00 3.85
425 426 1.663074 GCTCATAGCGCCCTCTTCG 60.663 63.158 2.29 0.00 0.00 3.79
426 427 4.352386 GCTCATAGCGCCCTCTTC 57.648 61.111 2.29 0.00 0.00 2.87
435 436 2.123342 CTCGTGCAGTTAGCTCATAGC 58.877 52.381 0.00 0.00 45.94 2.97
436 437 3.313803 TCTCTCGTGCAGTTAGCTCATAG 59.686 47.826 0.00 0.00 45.94 2.23
437 438 3.279434 TCTCTCGTGCAGTTAGCTCATA 58.721 45.455 0.00 0.00 45.94 2.15
438 439 2.095461 TCTCTCGTGCAGTTAGCTCAT 58.905 47.619 0.00 0.00 45.94 2.90
439 440 1.534729 TCTCTCGTGCAGTTAGCTCA 58.465 50.000 0.00 0.00 45.94 4.26
440 441 2.542824 GGATCTCTCGTGCAGTTAGCTC 60.543 54.545 0.00 0.00 45.94 4.09
441 442 1.407258 GGATCTCTCGTGCAGTTAGCT 59.593 52.381 0.00 0.00 45.94 3.32
442 443 1.135139 TGGATCTCTCGTGCAGTTAGC 59.865 52.381 0.00 0.00 45.96 3.09
443 444 3.181482 ACATGGATCTCTCGTGCAGTTAG 60.181 47.826 0.00 0.00 0.00 2.34
444 445 2.760650 ACATGGATCTCTCGTGCAGTTA 59.239 45.455 0.00 0.00 0.00 2.24
445 446 1.552337 ACATGGATCTCTCGTGCAGTT 59.448 47.619 0.00 0.00 0.00 3.16
446 447 1.189752 ACATGGATCTCTCGTGCAGT 58.810 50.000 0.00 0.00 0.00 4.40
447 448 2.861750 GCTACATGGATCTCTCGTGCAG 60.862 54.545 0.00 0.00 0.00 4.41
448 449 1.067669 GCTACATGGATCTCTCGTGCA 59.932 52.381 0.00 0.00 0.00 4.57
449 450 1.339610 AGCTACATGGATCTCTCGTGC 59.660 52.381 0.00 0.00 0.00 5.34
450 451 5.384063 AATAGCTACATGGATCTCTCGTG 57.616 43.478 0.00 0.00 0.00 4.35
451 452 5.303078 ACAAATAGCTACATGGATCTCTCGT 59.697 40.000 11.20 0.00 0.00 4.18
452 453 5.777802 ACAAATAGCTACATGGATCTCTCG 58.222 41.667 11.20 0.00 0.00 4.04
453 454 8.443953 AAAACAAATAGCTACATGGATCTCTC 57.556 34.615 11.20 0.00 0.00 3.20
454 455 7.500559 GGAAAACAAATAGCTACATGGATCTCT 59.499 37.037 11.20 0.00 0.00 3.10
455 456 7.500559 AGGAAAACAAATAGCTACATGGATCTC 59.499 37.037 11.20 3.86 0.00 2.75
456 457 7.349598 AGGAAAACAAATAGCTACATGGATCT 58.650 34.615 11.20 0.00 0.00 2.75
457 458 7.573968 AGGAAAACAAATAGCTACATGGATC 57.426 36.000 11.20 6.72 0.00 3.36
458 459 7.961326 AAGGAAAACAAATAGCTACATGGAT 57.039 32.000 11.20 0.00 0.00 3.41
459 460 7.093945 GGAAAGGAAAACAAATAGCTACATGGA 60.094 37.037 11.20 0.00 0.00 3.41
460 461 7.035612 GGAAAGGAAAACAAATAGCTACATGG 58.964 38.462 11.20 0.00 0.00 3.66
461 462 7.601856 TGGAAAGGAAAACAAATAGCTACATG 58.398 34.615 0.00 0.27 0.00 3.21
462 463 7.775053 TGGAAAGGAAAACAAATAGCTACAT 57.225 32.000 0.00 0.00 0.00 2.29
463 464 7.589958 TTGGAAAGGAAAACAAATAGCTACA 57.410 32.000 0.00 0.00 0.00 2.74
464 465 8.880878 TTTTGGAAAGGAAAACAAATAGCTAC 57.119 30.769 0.00 0.00 33.40 3.58
489 490 5.301805 CCATCACCAACAAGTCCTAGTTTTT 59.698 40.000 0.00 0.00 0.00 1.94
490 491 4.827284 CCATCACCAACAAGTCCTAGTTTT 59.173 41.667 0.00 0.00 0.00 2.43
491 492 4.398319 CCATCACCAACAAGTCCTAGTTT 58.602 43.478 0.00 0.00 0.00 2.66
492 493 3.810743 GCCATCACCAACAAGTCCTAGTT 60.811 47.826 0.00 0.00 0.00 2.24
493 494 2.290323 GCCATCACCAACAAGTCCTAGT 60.290 50.000 0.00 0.00 0.00 2.57
494 495 2.026822 AGCCATCACCAACAAGTCCTAG 60.027 50.000 0.00 0.00 0.00 3.02
495 496 1.985159 AGCCATCACCAACAAGTCCTA 59.015 47.619 0.00 0.00 0.00 2.94
496 497 0.773644 AGCCATCACCAACAAGTCCT 59.226 50.000 0.00 0.00 0.00 3.85
497 498 1.168714 GAGCCATCACCAACAAGTCC 58.831 55.000 0.00 0.00 0.00 3.85
498 499 2.191128 AGAGCCATCACCAACAAGTC 57.809 50.000 0.00 0.00 0.00 3.01
499 500 3.073062 AGTTAGAGCCATCACCAACAAGT 59.927 43.478 0.00 0.00 0.00 3.16
500 501 3.438087 CAGTTAGAGCCATCACCAACAAG 59.562 47.826 0.00 0.00 0.00 3.16
501 502 3.072330 TCAGTTAGAGCCATCACCAACAA 59.928 43.478 0.00 0.00 0.00 2.83
502 503 2.637382 TCAGTTAGAGCCATCACCAACA 59.363 45.455 0.00 0.00 0.00 3.33
503 504 3.334583 TCAGTTAGAGCCATCACCAAC 57.665 47.619 0.00 0.00 0.00 3.77
504 505 4.019411 TCATTCAGTTAGAGCCATCACCAA 60.019 41.667 0.00 0.00 0.00 3.67
505 506 3.519107 TCATTCAGTTAGAGCCATCACCA 59.481 43.478 0.00 0.00 0.00 4.17
506 507 4.125703 CTCATTCAGTTAGAGCCATCACC 58.874 47.826 0.00 0.00 0.00 4.02
507 508 5.016051 TCTCATTCAGTTAGAGCCATCAC 57.984 43.478 0.00 0.00 0.00 3.06
508 509 4.958581 TCTCTCATTCAGTTAGAGCCATCA 59.041 41.667 0.00 0.00 37.31 3.07
509 510 5.528043 TCTCTCATTCAGTTAGAGCCATC 57.472 43.478 0.00 0.00 37.31 3.51
510 511 5.946942 TTCTCTCATTCAGTTAGAGCCAT 57.053 39.130 0.00 0.00 37.31 4.40
511 512 5.745312 TTTCTCTCATTCAGTTAGAGCCA 57.255 39.130 0.00 0.00 37.31 4.75
512 513 6.093357 CCTTTTTCTCTCATTCAGTTAGAGCC 59.907 42.308 0.00 0.00 37.31 4.70
513 514 6.403092 GCCTTTTTCTCTCATTCAGTTAGAGC 60.403 42.308 0.00 0.00 37.31 4.09
514 515 6.652481 TGCCTTTTTCTCTCATTCAGTTAGAG 59.348 38.462 0.00 0.00 38.48 2.43
515 516 6.533730 TGCCTTTTTCTCTCATTCAGTTAGA 58.466 36.000 0.00 0.00 0.00 2.10
516 517 6.808008 TGCCTTTTTCTCTCATTCAGTTAG 57.192 37.500 0.00 0.00 0.00 2.34
517 518 6.716628 ACATGCCTTTTTCTCTCATTCAGTTA 59.283 34.615 0.00 0.00 0.00 2.24
518 519 5.537674 ACATGCCTTTTTCTCTCATTCAGTT 59.462 36.000 0.00 0.00 0.00 3.16
519 520 5.048224 CACATGCCTTTTTCTCTCATTCAGT 60.048 40.000 0.00 0.00 0.00 3.41
520 521 5.399858 CACATGCCTTTTTCTCTCATTCAG 58.600 41.667 0.00 0.00 0.00 3.02
521 522 4.321452 GCACATGCCTTTTTCTCTCATTCA 60.321 41.667 0.00 0.00 34.31 2.57
522 523 4.171754 GCACATGCCTTTTTCTCTCATTC 58.828 43.478 0.00 0.00 34.31 2.67
523 524 3.366679 CGCACATGCCTTTTTCTCTCATT 60.367 43.478 0.00 0.00 37.91 2.57
524 525 2.163010 CGCACATGCCTTTTTCTCTCAT 59.837 45.455 0.00 0.00 37.91 2.90
525 526 1.536766 CGCACATGCCTTTTTCTCTCA 59.463 47.619 0.00 0.00 37.91 3.27
526 527 1.730446 GCGCACATGCCTTTTTCTCTC 60.730 52.381 0.30 0.00 37.91 3.20
527 528 0.242017 GCGCACATGCCTTTTTCTCT 59.758 50.000 0.30 0.00 37.91 3.10
528 529 2.729378 GCGCACATGCCTTTTTCTC 58.271 52.632 0.30 0.00 37.91 2.87
529 530 4.972591 GCGCACATGCCTTTTTCT 57.027 50.000 0.30 0.00 37.91 2.52
537 538 2.807967 TCATAATCTAAGGCGCACATGC 59.192 45.455 10.83 0.00 37.78 4.06
538 539 5.422666 TTTCATAATCTAAGGCGCACATG 57.577 39.130 10.83 0.00 0.00 3.21
539 540 6.441274 CAATTTCATAATCTAAGGCGCACAT 58.559 36.000 10.83 0.00 0.00 3.21
540 541 5.733091 GCAATTTCATAATCTAAGGCGCACA 60.733 40.000 10.83 0.00 0.00 4.57
541 542 4.676924 GCAATTTCATAATCTAAGGCGCAC 59.323 41.667 10.83 0.00 0.00 5.34
542 543 4.337836 TGCAATTTCATAATCTAAGGCGCA 59.662 37.500 10.83 0.00 0.00 6.09
543 544 4.858935 TGCAATTTCATAATCTAAGGCGC 58.141 39.130 0.00 0.00 0.00 6.53
544 545 5.344128 GCATGCAATTTCATAATCTAAGGCG 59.656 40.000 14.21 0.00 0.00 5.52
545 546 6.218019 TGCATGCAATTTCATAATCTAAGGC 58.782 36.000 20.30 0.00 0.00 4.35
546 547 8.651391 TTTGCATGCAATTTCATAATCTAAGG 57.349 30.769 32.27 0.00 35.70 2.69
548 549 8.605746 GCTTTTGCATGCAATTTCATAATCTAA 58.394 29.630 32.27 17.63 46.58 2.10
549 550 8.133754 GCTTTTGCATGCAATTTCATAATCTA 57.866 30.769 32.27 11.24 46.58 1.98
550 551 7.011828 GCTTTTGCATGCAATTTCATAATCT 57.988 32.000 32.27 0.00 46.58 2.40
557 558 7.990229 GGCATATAAGCTTTTGCATGCAATTTC 60.990 37.037 32.27 22.10 46.46 2.17
558 559 6.238538 GGCATATAAGCTTTTGCATGCAATTT 60.239 34.615 32.27 23.59 46.46 1.82
559 560 5.237779 GGCATATAAGCTTTTGCATGCAATT 59.762 36.000 32.27 24.40 46.46 2.32
560 561 4.753107 GGCATATAAGCTTTTGCATGCAAT 59.247 37.500 32.27 19.85 46.46 3.56
561 562 4.121317 GGCATATAAGCTTTTGCATGCAA 58.879 39.130 28.80 28.80 46.46 4.08
562 563 3.385433 AGGCATATAAGCTTTTGCATGCA 59.615 39.130 18.46 18.46 46.46 3.96
567 568 7.010460 CAAAACCTTAGGCATATAAGCTTTTGC 59.990 37.037 3.20 11.96 39.27 3.68
568 569 8.250332 TCAAAACCTTAGGCATATAAGCTTTTG 58.750 33.333 3.20 18.56 42.72 2.44
569 570 8.361169 TCAAAACCTTAGGCATATAAGCTTTT 57.639 30.769 3.20 0.00 33.71 2.27
570 571 7.068716 CCTCAAAACCTTAGGCATATAAGCTTT 59.931 37.037 3.20 0.00 32.42 3.51
571 572 6.547510 CCTCAAAACCTTAGGCATATAAGCTT 59.452 38.462 3.48 3.48 32.42 3.74
572 573 6.064717 CCTCAAAACCTTAGGCATATAAGCT 58.935 40.000 0.00 0.00 32.42 3.74
573 574 6.062095 TCCTCAAAACCTTAGGCATATAAGC 58.938 40.000 0.00 0.00 32.42 3.09
574 575 6.712547 CCTCCTCAAAACCTTAGGCATATAAG 59.287 42.308 0.00 0.00 33.37 1.73
575 576 6.410388 CCCTCCTCAAAACCTTAGGCATATAA 60.410 42.308 0.00 0.00 0.00 0.98
576 577 5.073144 CCCTCCTCAAAACCTTAGGCATATA 59.927 44.000 0.00 0.00 0.00 0.86
577 578 4.141158 CCCTCCTCAAAACCTTAGGCATAT 60.141 45.833 0.00 0.00 0.00 1.78
578 579 3.202151 CCCTCCTCAAAACCTTAGGCATA 59.798 47.826 0.00 0.00 0.00 3.14
579 580 2.024941 CCCTCCTCAAAACCTTAGGCAT 60.025 50.000 0.00 0.00 0.00 4.40
580 581 1.354368 CCCTCCTCAAAACCTTAGGCA 59.646 52.381 0.00 0.00 0.00 4.75
581 582 1.633945 TCCCTCCTCAAAACCTTAGGC 59.366 52.381 0.00 0.00 0.00 3.93
582 583 2.913617 ACTCCCTCCTCAAAACCTTAGG 59.086 50.000 0.00 0.00 0.00 2.69
583 584 5.248705 ACTTACTCCCTCCTCAAAACCTTAG 59.751 44.000 0.00 0.00 0.00 2.18
584 585 5.160386 ACTTACTCCCTCCTCAAAACCTTA 58.840 41.667 0.00 0.00 0.00 2.69
585 586 3.981375 ACTTACTCCCTCCTCAAAACCTT 59.019 43.478 0.00 0.00 0.00 3.50
586 587 3.599348 ACTTACTCCCTCCTCAAAACCT 58.401 45.455 0.00 0.00 0.00 3.50
587 588 4.368565 AACTTACTCCCTCCTCAAAACC 57.631 45.455 0.00 0.00 0.00 3.27
588 589 6.762187 GCTATAACTTACTCCCTCCTCAAAAC 59.238 42.308 0.00 0.00 0.00 2.43
589 590 6.406624 CGCTATAACTTACTCCCTCCTCAAAA 60.407 42.308 0.00 0.00 0.00 2.44
590 591 5.068723 CGCTATAACTTACTCCCTCCTCAAA 59.931 44.000 0.00 0.00 0.00 2.69
591 592 4.583489 CGCTATAACTTACTCCCTCCTCAA 59.417 45.833 0.00 0.00 0.00 3.02
592 593 4.142790 CGCTATAACTTACTCCCTCCTCA 58.857 47.826 0.00 0.00 0.00 3.86
593 594 3.506844 CCGCTATAACTTACTCCCTCCTC 59.493 52.174 0.00 0.00 0.00 3.71
594 595 3.139770 TCCGCTATAACTTACTCCCTCCT 59.860 47.826 0.00 0.00 0.00 3.69
595 596 3.494332 TCCGCTATAACTTACTCCCTCC 58.506 50.000 0.00 0.00 0.00 4.30
596 597 5.725325 AATCCGCTATAACTTACTCCCTC 57.275 43.478 0.00 0.00 0.00 4.30
597 598 6.550163 TCTAATCCGCTATAACTTACTCCCT 58.450 40.000 0.00 0.00 0.00 4.20
598 599 6.625520 GCTCTAATCCGCTATAACTTACTCCC 60.626 46.154 0.00 0.00 0.00 4.30
599 600 6.072064 TGCTCTAATCCGCTATAACTTACTCC 60.072 42.308 0.00 0.00 0.00 3.85
600 601 6.910995 TGCTCTAATCCGCTATAACTTACTC 58.089 40.000 0.00 0.00 0.00 2.59
601 602 6.715718 TCTGCTCTAATCCGCTATAACTTACT 59.284 38.462 0.00 0.00 0.00 2.24
602 603 6.910995 TCTGCTCTAATCCGCTATAACTTAC 58.089 40.000 0.00 0.00 0.00 2.34
603 604 7.704578 ATCTGCTCTAATCCGCTATAACTTA 57.295 36.000 0.00 0.00 0.00 2.24
604 605 6.597832 ATCTGCTCTAATCCGCTATAACTT 57.402 37.500 0.00 0.00 0.00 2.66
605 606 7.629652 GCTTATCTGCTCTAATCCGCTATAACT 60.630 40.741 0.00 0.00 0.00 2.24
610 611 3.193691 GGCTTATCTGCTCTAATCCGCTA 59.806 47.826 0.00 0.00 0.00 4.26
612 613 2.289072 TGGCTTATCTGCTCTAATCCGC 60.289 50.000 0.00 0.00 0.00 5.54
641 642 3.190874 GACGATGAGCTTCGAAGGAAAT 58.809 45.455 25.77 2.90 41.62 2.17
673 674 4.342378 AGACCACACGCTATCATAGACAAT 59.658 41.667 0.00 0.00 0.00 2.71
685 686 1.614241 GGGACCATAGACCACACGCT 61.614 60.000 0.00 0.00 0.00 5.07
702 703 1.141858 GAGCCAAGTTAGATCCCTGGG 59.858 57.143 6.33 6.33 0.00 4.45
741 743 8.485578 ACAACTCCCCTAAAATCAACAAAATA 57.514 30.769 0.00 0.00 0.00 1.40
769 783 9.882996 GTTATAACCCTTAACAGTTGTACAAAC 57.117 33.333 10.51 5.04 31.34 2.93
844 859 3.120199 ACATAAACACAATGCGCAGACTC 60.120 43.478 18.32 0.00 0.00 3.36
846 861 2.910482 CACATAAACACAATGCGCAGAC 59.090 45.455 18.32 0.00 0.00 3.51
915 930 6.603599 GCCCAAGACTCATTTCTTTTAGGTAT 59.396 38.462 0.00 0.00 33.31 2.73
934 977 4.774124 TGTCATTGAGATAGAAGCCCAAG 58.226 43.478 0.00 0.00 0.00 3.61
951 994 0.814457 GAGAGGAGTCACGCTGTCAT 59.186 55.000 0.00 0.00 0.00 3.06
1007 1050 0.107410 ACTCCTCTCGCTCTCGTCAT 60.107 55.000 0.00 0.00 36.96 3.06
1247 5522 3.708631 TGCAGGTTTGAAATTGAAAGGGA 59.291 39.130 0.00 0.00 0.00 4.20
1380 5677 1.149964 GGTACCGCGCTGATTGGTAC 61.150 60.000 24.86 24.86 37.20 3.34
1388 5685 3.649277 AAGAGCTGGTACCGCGCTG 62.649 63.158 27.27 0.00 37.59 5.18
1496 5810 2.032634 TGTTGAATGTCTCCGGCGC 61.033 57.895 0.00 0.00 0.00 6.53
1522 5836 2.300152 TCTCTGTGCTTACCAAGACCAG 59.700 50.000 0.00 0.00 32.36 4.00
1671 6039 2.162681 GAATGCCCAACTAGCACACTT 58.837 47.619 0.00 0.00 44.40 3.16
1715 6083 5.584649 TCCAATAGTAGAGTTTTTGCCGATG 59.415 40.000 0.00 0.00 0.00 3.84
2425 6878 6.708502 TCAAGATAGAGTAGAATCACCTCTCG 59.291 42.308 5.21 0.00 36.90 4.04
2447 6900 7.201875 GGTTTCAACTAAGGGAACTCAAATCAA 60.202 37.037 0.00 0.00 42.68 2.57
2543 7008 4.979204 TCGCGACTCGAAAACCAT 57.021 50.000 3.71 0.00 45.36 3.55
2567 7032 4.504916 CTGCCCCAGAGCGACTCG 62.505 72.222 0.00 0.00 35.36 4.18
2568 7033 4.828925 GCTGCCCCAGAGCGACTC 62.829 72.222 0.00 0.00 32.44 3.36
2573 7038 4.828925 GAGTCGCTGCCCCAGAGC 62.829 72.222 0.00 0.00 32.44 4.09
2574 7039 4.504916 CGAGTCGCTGCCCCAGAG 62.505 72.222 0.00 0.00 32.44 3.35
2578 7043 4.821589 CTTCCGAGTCGCTGCCCC 62.822 72.222 7.12 0.00 0.00 5.80
2579 7044 3.296709 TTCTTCCGAGTCGCTGCCC 62.297 63.158 7.12 0.00 0.00 5.36
2580 7045 1.807573 CTTCTTCCGAGTCGCTGCC 60.808 63.158 7.12 0.00 0.00 4.85
2581 7046 1.073768 GACTTCTTCCGAGTCGCTGC 61.074 60.000 7.12 0.00 34.76 5.25
2582 7047 3.022981 GACTTCTTCCGAGTCGCTG 57.977 57.895 7.12 0.00 34.76 5.18
2589 7054 1.883732 CAGGCTCGACTTCTTCCGA 59.116 57.895 0.00 0.00 0.00 4.55
2590 7055 1.807573 GCAGGCTCGACTTCTTCCG 60.808 63.158 0.00 0.00 0.00 4.30
2591 7056 1.807573 CGCAGGCTCGACTTCTTCC 60.808 63.158 0.91 0.00 0.00 3.46
2592 7057 0.667792 AACGCAGGCTCGACTTCTTC 60.668 55.000 12.16 0.00 0.00 2.87
2593 7058 0.946221 CAACGCAGGCTCGACTTCTT 60.946 55.000 12.16 0.00 0.00 2.52
2594 7059 1.373497 CAACGCAGGCTCGACTTCT 60.373 57.895 12.16 0.00 0.00 2.85
2595 7060 1.664965 ACAACGCAGGCTCGACTTC 60.665 57.895 12.16 0.00 0.00 3.01
2596 7061 1.956170 CACAACGCAGGCTCGACTT 60.956 57.895 12.16 0.00 0.00 3.01
2597 7062 2.356313 CACAACGCAGGCTCGACT 60.356 61.111 12.16 0.00 0.00 4.18
2598 7063 2.355837 TCACAACGCAGGCTCGAC 60.356 61.111 12.16 0.00 0.00 4.20
2599 7064 2.355837 GTCACAACGCAGGCTCGA 60.356 61.111 12.16 0.00 0.00 4.04
2600 7065 2.356313 AGTCACAACGCAGGCTCG 60.356 61.111 5.08 5.08 0.00 5.03
2601 7066 2.320587 CCAGTCACAACGCAGGCTC 61.321 63.158 0.00 0.00 0.00 4.70
2602 7067 2.281070 CCAGTCACAACGCAGGCT 60.281 61.111 0.00 0.00 0.00 4.58
2603 7068 2.591715 ACCAGTCACAACGCAGGC 60.592 61.111 0.00 0.00 0.00 4.85
2604 7069 2.310233 CGACCAGTCACAACGCAGG 61.310 63.158 0.00 0.00 0.00 4.85
2605 7070 2.943345 GCGACCAGTCACAACGCAG 61.943 63.158 0.00 0.00 46.75 5.18
2606 7071 2.964925 GCGACCAGTCACAACGCA 60.965 61.111 0.00 0.00 46.75 5.24
2607 7072 4.059459 CGCGACCAGTCACAACGC 62.059 66.667 0.00 0.00 44.64 4.84
2608 7073 2.354188 TCGCGACCAGTCACAACG 60.354 61.111 3.71 0.00 0.00 4.10
2609 7074 1.276145 GAGTCGCGACCAGTCACAAC 61.276 60.000 34.08 7.42 0.00 3.32
2610 7075 1.007734 GAGTCGCGACCAGTCACAA 60.008 57.895 34.08 0.00 0.00 3.33
2611 7076 2.130073 CTGAGTCGCGACCAGTCACA 62.130 60.000 32.11 22.89 0.00 3.58
2612 7077 1.442857 CTGAGTCGCGACCAGTCAC 60.443 63.158 32.11 20.55 0.00 3.67
2613 7078 2.626780 CCTGAGTCGCGACCAGTCA 61.627 63.158 34.73 29.68 31.82 3.41
2614 7079 2.179517 CCTGAGTCGCGACCAGTC 59.820 66.667 34.73 27.58 31.82 3.51
2615 7080 3.374402 CCCTGAGTCGCGACCAGT 61.374 66.667 34.73 22.60 31.82 4.00
2616 7081 3.343788 GACCCTGAGTCGCGACCAG 62.344 68.421 32.88 32.88 35.30 4.00
2617 7082 3.371063 GACCCTGAGTCGCGACCA 61.371 66.667 34.08 27.69 35.30 4.02
2626 7091 3.125573 TCGACTCGCGACCCTGAG 61.126 66.667 3.71 0.00 45.59 3.35
2634 7099 0.372679 TAGCTTAGTGTCGACTCGCG 59.627 55.000 17.92 0.00 42.69 5.87
2635 7100 2.159544 ACTTAGCTTAGTGTCGACTCGC 60.160 50.000 17.92 11.93 33.21 5.03
2636 7101 3.672310 GACTTAGCTTAGTGTCGACTCG 58.328 50.000 17.92 1.95 33.21 4.18
2642 7107 3.844577 TGGTCGACTTAGCTTAGTGTC 57.155 47.619 16.46 4.27 0.00 3.67
2643 7108 6.466885 AATATGGTCGACTTAGCTTAGTGT 57.533 37.500 16.46 0.00 0.00 3.55
2644 7109 7.772332 AAAATATGGTCGACTTAGCTTAGTG 57.228 36.000 16.46 3.28 0.00 2.74
2645 7110 7.201617 GCAAAAATATGGTCGACTTAGCTTAGT 60.202 37.037 16.46 4.78 0.00 2.24
2646 7111 7.126398 GCAAAAATATGGTCGACTTAGCTTAG 58.874 38.462 16.46 0.00 0.00 2.18
2647 7112 6.237996 CGCAAAAATATGGTCGACTTAGCTTA 60.238 38.462 16.46 1.81 0.00 3.09
2648 7113 5.447279 CGCAAAAATATGGTCGACTTAGCTT 60.447 40.000 16.46 1.36 0.00 3.74
2649 7114 4.034048 CGCAAAAATATGGTCGACTTAGCT 59.966 41.667 16.46 0.00 0.00 3.32
2650 7115 4.033587 TCGCAAAAATATGGTCGACTTAGC 59.966 41.667 16.46 8.32 0.00 3.09
2651 7116 5.490213 GTCGCAAAAATATGGTCGACTTAG 58.510 41.667 16.46 0.00 41.84 2.18
2652 7117 5.459110 GTCGCAAAAATATGGTCGACTTA 57.541 39.130 16.46 8.29 41.84 2.24
2653 7118 4.336532 GTCGCAAAAATATGGTCGACTT 57.663 40.909 16.46 6.15 41.84 3.01
2655 7120 3.369756 TGAGTCGCAAAAATATGGTCGAC 59.630 43.478 7.13 7.13 44.36 4.20
2656 7121 3.591023 TGAGTCGCAAAAATATGGTCGA 58.409 40.909 0.00 0.00 0.00 4.20
2657 7122 4.536364 ATGAGTCGCAAAAATATGGTCG 57.464 40.909 0.00 0.00 0.00 4.79
2658 7123 6.480320 AGTCTATGAGTCGCAAAAATATGGTC 59.520 38.462 0.00 0.00 0.00 4.02
2659 7124 6.349300 AGTCTATGAGTCGCAAAAATATGGT 58.651 36.000 0.00 0.00 0.00 3.55
2660 7125 6.851222 AGTCTATGAGTCGCAAAAATATGG 57.149 37.500 0.00 0.00 0.00 2.74
2661 7126 8.581057 ACTAGTCTATGAGTCGCAAAAATATG 57.419 34.615 0.00 0.00 0.00 1.78
2662 7127 8.804688 GACTAGTCTATGAGTCGCAAAAATAT 57.195 34.615 15.91 0.00 33.27 1.28
2700 7165 3.663908 CATGAATTTTGAGTCGCTCGAC 58.336 45.455 13.92 13.92 44.86 4.20
2701 7166 2.094258 GCATGAATTTTGAGTCGCTCGA 59.906 45.455 0.00 0.00 32.35 4.04
2702 7167 2.094894 AGCATGAATTTTGAGTCGCTCG 59.905 45.455 0.00 0.00 32.35 5.03
2703 7168 3.125829 TGAGCATGAATTTTGAGTCGCTC 59.874 43.478 0.00 0.00 43.78 5.03
2704 7169 3.076621 TGAGCATGAATTTTGAGTCGCT 58.923 40.909 0.00 0.00 0.00 4.93
2705 7170 3.476295 TGAGCATGAATTTTGAGTCGC 57.524 42.857 0.00 0.00 0.00 5.19
2706 7171 6.257411 AGAGTATGAGCATGAATTTTGAGTCG 59.743 38.462 0.00 0.00 0.00 4.18
2707 7172 7.551035 AGAGTATGAGCATGAATTTTGAGTC 57.449 36.000 0.00 0.00 0.00 3.36
2708 7173 7.934855 AAGAGTATGAGCATGAATTTTGAGT 57.065 32.000 0.00 0.00 0.00 3.41
2709 7174 9.107177 AGTAAGAGTATGAGCATGAATTTTGAG 57.893 33.333 0.00 0.00 0.00 3.02
2713 7178 9.499479 CCATAGTAAGAGTATGAGCATGAATTT 57.501 33.333 0.00 0.00 34.24 1.82
2714 7179 8.874156 TCCATAGTAAGAGTATGAGCATGAATT 58.126 33.333 0.00 0.00 34.24 2.17
2715 7180 8.427902 TCCATAGTAAGAGTATGAGCATGAAT 57.572 34.615 0.00 0.00 34.24 2.57
2716 7181 7.524532 GCTCCATAGTAAGAGTATGAGCATGAA 60.525 40.741 0.00 0.00 36.20 2.57
2717 7182 6.071672 GCTCCATAGTAAGAGTATGAGCATGA 60.072 42.308 0.00 1.82 36.20 3.07
2718 7183 6.098679 GCTCCATAGTAAGAGTATGAGCATG 58.901 44.000 0.00 0.00 36.20 4.06
2719 7184 5.105957 CGCTCCATAGTAAGAGTATGAGCAT 60.106 44.000 16.85 0.00 36.08 3.79
2720 7185 4.216472 CGCTCCATAGTAAGAGTATGAGCA 59.784 45.833 16.85 0.00 36.08 4.26
2721 7186 4.456222 TCGCTCCATAGTAAGAGTATGAGC 59.544 45.833 0.00 0.00 34.24 4.26
2722 7187 5.391523 GCTCGCTCCATAGTAAGAGTATGAG 60.392 48.000 3.36 8.03 34.24 2.90
2723 7188 4.456222 GCTCGCTCCATAGTAAGAGTATGA 59.544 45.833 3.36 0.16 34.24 2.15
2724 7189 4.457603 AGCTCGCTCCATAGTAAGAGTATG 59.542 45.833 3.33 0.00 32.58 2.39
2725 7190 4.658063 AGCTCGCTCCATAGTAAGAGTAT 58.342 43.478 3.33 0.00 32.47 2.12
2726 7191 4.088056 AGCTCGCTCCATAGTAAGAGTA 57.912 45.455 3.33 0.00 32.47 2.59
2727 7192 2.938838 AGCTCGCTCCATAGTAAGAGT 58.061 47.619 3.33 0.00 32.47 3.24
2728 7193 5.440234 TTAAGCTCGCTCCATAGTAAGAG 57.560 43.478 0.00 0.00 0.00 2.85
2729 7194 4.261656 GCTTAAGCTCGCTCCATAGTAAGA 60.262 45.833 20.38 0.00 38.21 2.10
2730 7195 3.984633 GCTTAAGCTCGCTCCATAGTAAG 59.015 47.826 20.38 0.00 38.21 2.34
2734 7199 2.515926 TGCTTAAGCTCGCTCCATAG 57.484 50.000 26.90 0.00 42.66 2.23
3019 8114 4.716287 AGGGGAAATTCCAACCATTATGTG 59.284 41.667 14.68 0.00 38.64 3.21
3215 8316 4.241590 CAATGTTGCAGCCAGTAAAAGA 57.758 40.909 0.00 0.00 0.00 2.52
3400 8505 5.173312 CGAGCACTAGGTATTACAACAATCG 59.827 44.000 0.00 0.00 0.00 3.34
3720 8846 7.149569 TCCTTCAGAAGACTATTGCATTTTG 57.850 36.000 12.14 0.00 0.00 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.