Multiple sequence alignment - TraesCS6B01G096000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G096000 chr6B 100.000 5606 0 0 1 5606 72181846 72187451 0.000000e+00 10353.0
1 TraesCS6B01G096000 chr6A 94.064 1853 83 13 1122 2962 39145322 39147159 0.000000e+00 2787.0
2 TraesCS6B01G096000 chr6A 83.420 959 92 32 3546 4478 39147545 39148462 0.000000e+00 828.0
3 TraesCS6B01G096000 chr6A 91.878 394 17 3 3120 3504 39147158 39147545 2.300000e-148 536.0
4 TraesCS6B01G096000 chr6A 89.891 366 31 3 5243 5606 39149677 39150038 3.060000e-127 466.0
5 TraesCS6B01G096000 chr6A 85.915 426 48 9 4496 4919 39148451 39148866 1.430000e-120 444.0
6 TraesCS6B01G096000 chr6A 73.093 944 195 40 6 930 3682140 3683043 1.190000e-71 281.0
7 TraesCS6B01G096000 chr6D 92.510 1829 93 31 3120 4926 34976998 34978804 0.000000e+00 2579.0
8 TraesCS6B01G096000 chr6D 92.093 1037 55 12 1941 2962 34975975 34976999 0.000000e+00 1435.0
9 TraesCS6B01G096000 chr6D 89.301 458 36 9 1119 1565 34975046 34975501 3.790000e-156 562.0
10 TraesCS6B01G096000 chr6D 85.321 545 43 22 5093 5606 34978790 34979328 3.850000e-146 529.0
11 TraesCS6B01G096000 chr2A 87.606 944 101 8 1 932 100532840 100531901 0.000000e+00 1081.0
12 TraesCS6B01G096000 chr2A 87.288 944 101 8 6 935 561014573 561013635 0.000000e+00 1061.0
13 TraesCS6B01G096000 chr2A 87.642 704 79 5 225 925 385315732 385316430 0.000000e+00 811.0
14 TraesCS6B01G096000 chr2A 95.263 190 9 0 4912 5101 72943261 72943072 9.130000e-78 302.0
15 TraesCS6B01G096000 chr4B 86.437 929 108 7 6 921 416628441 416627518 0.000000e+00 1002.0
16 TraesCS6B01G096000 chr4B 95.337 193 8 1 4910 5101 591315476 591315284 7.060000e-79 305.0
17 TraesCS6B01G096000 chr4B 94.792 192 8 2 4911 5101 399038638 399038828 1.180000e-76 298.0
18 TraesCS6B01G096000 chr4B 76.728 434 95 5 504 933 286321538 286321969 2.610000e-58 237.0
19 TraesCS6B01G096000 chr7D 85.443 948 104 14 1 932 476778189 476777260 0.000000e+00 955.0
20 TraesCS6B01G096000 chr7D 79.569 881 111 48 4053 4919 560674378 560675203 2.930000e-157 566.0
21 TraesCS6B01G096000 chr7D 81.873 502 60 17 5115 5597 560710995 560711484 1.460000e-105 394.0
22 TraesCS6B01G096000 chr7D 81.474 502 62 17 5115 5597 560685043 560685532 3.170000e-102 383.0
23 TraesCS6B01G096000 chr7D 80.383 418 53 22 4510 4919 560684611 560685007 1.980000e-74 291.0
24 TraesCS6B01G096000 chr7D 80.144 418 54 22 4510 4919 560710563 560710959 9.190000e-73 285.0
25 TraesCS6B01G096000 chr7D 95.732 164 5 1 2960 3121 83345013 83344850 4.310000e-66 263.0
26 TraesCS6B01G096000 chr7D 77.703 444 85 10 503 937 40836934 40836496 5.570000e-65 259.0
27 TraesCS6B01G096000 chr7D 94.048 168 8 1 2957 3122 390928775 390928942 2.590000e-63 254.0
28 TraesCS6B01G096000 chr7D 75.223 448 95 12 498 936 529068169 529068609 1.230000e-46 198.0
29 TraesCS6B01G096000 chr5B 85.322 947 103 18 6 935 454401453 454402380 0.000000e+00 946.0
30 TraesCS6B01G096000 chr5B 95.812 191 8 0 4911 5101 6499067 6499257 5.450000e-80 309.0
31 TraesCS6B01G096000 chr5B 94.479 163 7 1 2961 3121 36485589 36485427 3.350000e-62 250.0
32 TraesCS6B01G096000 chr5B 94.479 163 7 1 2961 3121 36489251 36489089 3.350000e-62 250.0
33 TraesCS6B01G096000 chr5B 94.479 163 7 1 2961 3121 36491085 36490923 3.350000e-62 250.0
34 TraesCS6B01G096000 chr5B 89.840 187 14 4 4906 5092 26880862 26881043 9.390000e-58 235.0
35 TraesCS6B01G096000 chr1A 85.038 929 102 8 6 922 442553618 442552715 0.000000e+00 911.0
36 TraesCS6B01G096000 chr1A 95.238 189 9 0 4914 5102 548586103 548586291 3.280000e-77 300.0
37 TraesCS6B01G096000 chr7B 79.436 1206 142 67 3742 4919 608474723 608475850 0.000000e+00 756.0
38 TraesCS6B01G096000 chr7B 95.238 189 7 2 4908 5095 662001444 662001631 1.180000e-76 298.0
39 TraesCS6B01G096000 chr7A 82.237 760 91 31 3746 4484 644854560 644855296 2.870000e-172 616.0
40 TraesCS6B01G096000 chr7A 81.871 513 69 14 5115 5606 644855694 644856203 1.450000e-110 411.0
41 TraesCS6B01G096000 chr7A 73.840 948 210 26 6 932 679842528 679843458 5.380000e-90 342.0
42 TraesCS6B01G096000 chr4A 96.237 186 6 1 4908 5093 662621180 662620996 2.540000e-78 303.0
43 TraesCS6B01G096000 chr3B 94.845 194 6 4 4908 5101 702842256 702842067 3.280000e-77 300.0
44 TraesCS6B01G096000 chr3B 90.155 193 18 1 4905 5097 695552320 695552511 3.350000e-62 250.0
45 TraesCS6B01G096000 chr3B 94.479 163 7 1 2961 3121 716149098 716148936 3.350000e-62 250.0
46 TraesCS6B01G096000 chr3B 90.551 127 8 4 4906 5030 733270322 733270198 1.250000e-36 165.0
47 TraesCS6B01G096000 chr1B 93.500 200 10 3 4909 5107 670172555 670172358 1.530000e-75 294.0
48 TraesCS6B01G096000 chr4D 73.043 920 203 27 33 933 404668442 404667549 3.310000e-72 283.0
49 TraesCS6B01G096000 chr4D 93.567 171 8 2 2956 3124 64390637 64390468 9.320000e-63 252.0
50 TraesCS6B01G096000 chr2B 92.708 192 14 0 4906 5097 7658818 7659009 1.540000e-70 278.0
51 TraesCS6B01G096000 chr2B 82.632 190 7 12 4905 5094 672575831 672575668 1.630000e-30 145.0
52 TraesCS6B01G096000 chr2B 85.526 76 9 2 986 1060 183654999 183655073 1.670000e-10 78.7
53 TraesCS6B01G096000 chr3D 72.490 956 206 33 4 932 513895126 513894201 7.210000e-64 255.0
54 TraesCS6B01G096000 chr5D 94.479 163 7 1 2961 3121 26906338 26906500 3.350000e-62 250.0
55 TraesCS6B01G096000 chr5D 74.904 522 107 16 426 934 13921966 13922476 3.400000e-52 217.0
56 TraesCS6B01G096000 chr5D 75.547 274 53 13 673 936 235701686 235701417 7.630000e-24 122.0
57 TraesCS6B01G096000 chr2D 92.941 170 9 2 2957 3123 351055242 351055411 1.560000e-60 244.0
58 TraesCS6B01G096000 chr2D 85.795 176 20 5 769 941 87799054 87799227 1.240000e-41 182.0
59 TraesCS6B01G096000 chrUn 78.824 170 23 8 766 931 322381041 322380881 9.940000e-18 102.0
60 TraesCS6B01G096000 chrUn 78.824 170 23 8 766 931 351570368 351570528 9.940000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G096000 chr6B 72181846 72187451 5605 False 10353.00 10353 100.00000 1 5606 1 chr6B.!!$F1 5605
1 TraesCS6B01G096000 chr6A 39145322 39150038 4716 False 1012.20 2787 89.03360 1122 5606 5 chr6A.!!$F2 4484
2 TraesCS6B01G096000 chr6A 3682140 3683043 903 False 281.00 281 73.09300 6 930 1 chr6A.!!$F1 924
3 TraesCS6B01G096000 chr6D 34975046 34979328 4282 False 1276.25 2579 89.80625 1119 5606 4 chr6D.!!$F1 4487
4 TraesCS6B01G096000 chr2A 100531901 100532840 939 True 1081.00 1081 87.60600 1 932 1 chr2A.!!$R2 931
5 TraesCS6B01G096000 chr2A 561013635 561014573 938 True 1061.00 1061 87.28800 6 935 1 chr2A.!!$R3 929
6 TraesCS6B01G096000 chr2A 385315732 385316430 698 False 811.00 811 87.64200 225 925 1 chr2A.!!$F1 700
7 TraesCS6B01G096000 chr4B 416627518 416628441 923 True 1002.00 1002 86.43700 6 921 1 chr4B.!!$R1 915
8 TraesCS6B01G096000 chr7D 476777260 476778189 929 True 955.00 955 85.44300 1 932 1 chr7D.!!$R3 931
9 TraesCS6B01G096000 chr7D 560674378 560675203 825 False 566.00 566 79.56900 4053 4919 1 chr7D.!!$F3 866
10 TraesCS6B01G096000 chr7D 560710563 560711484 921 False 339.50 394 81.00850 4510 5597 2 chr7D.!!$F5 1087
11 TraesCS6B01G096000 chr7D 560684611 560685532 921 False 337.00 383 80.92850 4510 5597 2 chr7D.!!$F4 1087
12 TraesCS6B01G096000 chr5B 454401453 454402380 927 False 946.00 946 85.32200 6 935 1 chr5B.!!$F3 929
13 TraesCS6B01G096000 chr5B 36485427 36491085 5658 True 250.00 250 94.47900 2961 3121 3 chr5B.!!$R1 160
14 TraesCS6B01G096000 chr1A 442552715 442553618 903 True 911.00 911 85.03800 6 922 1 chr1A.!!$R1 916
15 TraesCS6B01G096000 chr7B 608474723 608475850 1127 False 756.00 756 79.43600 3742 4919 1 chr7B.!!$F1 1177
16 TraesCS6B01G096000 chr7A 644854560 644856203 1643 False 513.50 616 82.05400 3746 5606 2 chr7A.!!$F2 1860
17 TraesCS6B01G096000 chr7A 679842528 679843458 930 False 342.00 342 73.84000 6 932 1 chr7A.!!$F1 926
18 TraesCS6B01G096000 chr4D 404667549 404668442 893 True 283.00 283 73.04300 33 933 1 chr4D.!!$R2 900
19 TraesCS6B01G096000 chr3D 513894201 513895126 925 True 255.00 255 72.49000 4 932 1 chr3D.!!$R1 928
20 TraesCS6B01G096000 chr5D 13921966 13922476 510 False 217.00 217 74.90400 426 934 1 chr5D.!!$F1 508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
969 986 0.041047 CGCCACAACACATGACACTG 60.041 55.000 0.00 0.00 0.00 3.66 F
1009 1026 0.107831 CGGGGCCAGATTCCGAAATA 59.892 55.000 11.55 0.00 45.96 1.40 F
1038 1055 0.615331 GGAGGTCAGATGTGCCTGAA 59.385 55.000 9.95 0.00 43.94 3.02 F
1044 1061 0.617413 CAGATGTGCCTGAAGTCCCT 59.383 55.000 0.00 0.00 36.29 4.20 F
1046 1063 0.615331 GATGTGCCTGAAGTCCCTCA 59.385 55.000 0.00 0.00 0.00 3.86 F
1115 1132 0.744281 CCTGAACGGGCTTTGTTTGT 59.256 50.000 0.00 0.00 0.00 2.83 F
1116 1133 1.136110 CCTGAACGGGCTTTGTTTGTT 59.864 47.619 0.00 0.00 0.00 2.83 F
1565 1593 1.202582 TCGTGCTTAGAGCTCTGTTCC 59.797 52.381 26.78 11.83 42.97 3.62 F
2060 2191 1.211949 CCGACATCCAAATGGGTAGGT 59.788 52.381 0.00 0.00 37.19 3.08 F
3678 5138 0.537188 TCCTTGGCTTCTCCGATGAC 59.463 55.000 0.00 0.00 37.80 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2761 2909 0.872388 CCCTTTCACGCAACACCTAC 59.128 55.000 0.00 0.0 0.00 3.18 R
2899 3047 2.493035 CATTGCTACGATATGCCACCA 58.507 47.619 0.00 0.0 0.00 4.17 R
2958 3107 3.744940 TTTAGGAACGGAGGGAGTAGA 57.255 47.619 0.00 0.0 0.00 2.59 R
2964 3113 4.957684 AGACATATTTAGGAACGGAGGG 57.042 45.455 0.00 0.0 0.00 4.30 R
3049 3200 8.546322 TGGACTACATACGGATGTATATAGACT 58.454 37.037 20.64 0.0 45.42 3.24 R
3097 3248 8.912614 ATTACTCCCTCCGTTCCTAAATATAT 57.087 34.615 0.00 0.0 0.00 0.86 R
3196 4641 8.964476 AGAAAAACTAACTGAAACATCTCTCA 57.036 30.769 0.00 0.0 0.00 3.27 R
3433 4879 0.107410 ACAGGCAAGGTTTCGTCACA 60.107 50.000 0.00 0.0 0.00 3.58 R
3880 5348 0.179111 CTCGCCCAAGTTCATCGCTA 60.179 55.000 0.00 0.0 0.00 4.26 R
4997 7932 0.104855 ACGTCAGCACACACACATCT 59.895 50.000 0.00 0.0 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.194755 TGCTCATAACTACTTGCCTTCGA 59.805 43.478 0.00 0.00 0.00 3.71
146 148 2.093216 GCTCGAGCAGTTTGGATGG 58.907 57.895 31.91 0.00 41.59 3.51
161 163 2.771943 TGGATGGTATCAAGGAGTCCAC 59.228 50.000 12.86 0.00 29.89 4.02
194 205 3.928618 CTTTTGCGTCGCCGAAGCC 62.929 63.158 21.61 5.17 36.29 4.35
277 288 1.203479 TCTGGCATATATGGGAGGCCT 60.203 52.381 3.86 3.86 44.85 5.19
291 302 1.130054 AGGCCTGGAACTCTGCAAGA 61.130 55.000 3.11 0.00 43.69 3.02
313 324 1.722034 TGAACCTGAAGCTCCTCACT 58.278 50.000 0.00 0.00 0.00 3.41
317 328 0.248843 CCTGAAGCTCCTCACTCACC 59.751 60.000 0.00 0.00 0.00 4.02
318 329 0.248843 CTGAAGCTCCTCACTCACCC 59.751 60.000 0.00 0.00 0.00 4.61
319 330 1.194781 TGAAGCTCCTCACTCACCCC 61.195 60.000 0.00 0.00 0.00 4.95
320 331 1.904990 GAAGCTCCTCACTCACCCCC 61.905 65.000 0.00 0.00 0.00 5.40
321 332 3.775654 GCTCCTCACTCACCCCCG 61.776 72.222 0.00 0.00 0.00 5.73
359 370 5.843421 AGGGCTCAGGCTTATATAGATATGG 59.157 44.000 0.00 0.00 38.73 2.74
387 401 3.639094 CAGCACCTATACAAGCCTACTCT 59.361 47.826 0.00 0.00 0.00 3.24
418 432 1.152030 TGAGACCCCTGCTTCCAGT 60.152 57.895 0.00 0.00 37.38 4.00
424 438 1.203313 ACCCCTGCTTCCAGTTCTCTA 60.203 52.381 0.00 0.00 37.38 2.43
451 465 4.203076 CCGCCGCTAGGTACGCTT 62.203 66.667 0.00 0.00 40.50 4.68
650 665 4.261405 GGGAGAACTACTCTGATGTGATCG 60.261 50.000 0.00 0.00 44.37 3.69
655 670 5.242069 ACTACTCTGATGTGATCGTTCAG 57.758 43.478 11.25 11.25 30.85 3.02
699 714 4.655963 CAAAGACTGAATTCTTCCTCCCA 58.344 43.478 7.05 0.00 34.60 4.37
700 715 3.990959 AGACTGAATTCTTCCTCCCAC 57.009 47.619 7.05 0.00 0.00 4.61
702 717 1.339151 ACTGAATTCTTCCTCCCACGC 60.339 52.381 7.05 0.00 0.00 5.34
738 753 5.533528 TGGGATCAATTGTTGCTGATATCAG 59.466 40.000 25.64 25.64 46.40 2.90
763 778 1.270358 ACAACTGGAGCTCTTTCGTCC 60.270 52.381 14.64 0.00 0.00 4.79
844 859 6.003234 TCTAGTTTGAACTCTTCGAGTCTG 57.997 41.667 0.00 0.00 42.59 3.51
845 860 3.385577 AGTTTGAACTCTTCGAGTCTGC 58.614 45.455 0.00 0.00 42.59 4.26
854 871 4.450419 ACTCTTCGAGTCTGCATTTTTCAG 59.550 41.667 0.00 0.00 38.71 3.02
950 967 1.456296 AAAACTATTTCGGGGTCGGC 58.544 50.000 0.00 0.00 36.95 5.54
951 968 0.741927 AAACTATTTCGGGGTCGGCG 60.742 55.000 0.00 0.00 36.95 6.46
952 969 2.965462 CTATTTCGGGGTCGGCGC 60.965 66.667 0.00 0.00 36.95 6.53
953 970 4.534141 TATTTCGGGGTCGGCGCC 62.534 66.667 19.07 19.07 43.52 6.53
962 979 3.353836 GTCGGCGCCACAACACAT 61.354 61.111 28.98 0.00 0.00 3.21
963 980 3.353029 TCGGCGCCACAACACATG 61.353 61.111 28.98 6.54 0.00 3.21
964 981 3.353029 CGGCGCCACAACACATGA 61.353 61.111 28.98 0.00 0.00 3.07
965 982 2.255252 GGCGCCACAACACATGAC 59.745 61.111 24.80 0.00 0.00 3.06
966 983 2.551006 GGCGCCACAACACATGACA 61.551 57.895 24.80 0.00 0.00 3.58
967 984 1.370414 GCGCCACAACACATGACAC 60.370 57.895 0.00 0.00 0.00 3.67
968 985 1.785041 GCGCCACAACACATGACACT 61.785 55.000 0.00 0.00 0.00 3.55
969 986 0.041047 CGCCACAACACATGACACTG 60.041 55.000 0.00 0.00 0.00 3.66
970 987 1.308047 GCCACAACACATGACACTGA 58.692 50.000 0.00 0.00 0.00 3.41
971 988 1.675483 GCCACAACACATGACACTGAA 59.325 47.619 0.00 0.00 0.00 3.02
972 989 2.541588 GCCACAACACATGACACTGAAC 60.542 50.000 0.00 0.00 0.00 3.18
973 990 2.682352 CCACAACACATGACACTGAACA 59.318 45.455 0.00 0.00 0.00 3.18
974 991 3.316029 CCACAACACATGACACTGAACAT 59.684 43.478 0.00 0.00 0.00 2.71
975 992 4.284485 CACAACACATGACACTGAACATG 58.716 43.478 0.00 14.53 46.11 3.21
980 997 3.909776 CATGACACTGAACATGTTGCT 57.090 42.857 17.58 0.00 38.98 3.91
981 998 4.233123 CATGACACTGAACATGTTGCTT 57.767 40.909 17.58 0.00 38.98 3.91
982 999 5.361135 CATGACACTGAACATGTTGCTTA 57.639 39.130 17.58 0.00 38.98 3.09
983 1000 5.946298 CATGACACTGAACATGTTGCTTAT 58.054 37.500 17.58 0.00 38.98 1.73
984 1001 6.384224 CATGACACTGAACATGTTGCTTATT 58.616 36.000 17.58 0.00 38.98 1.40
985 1002 6.000891 TGACACTGAACATGTTGCTTATTC 57.999 37.500 17.58 5.85 0.00 1.75
986 1003 5.048782 TGACACTGAACATGTTGCTTATTCC 60.049 40.000 17.58 0.00 0.00 3.01
987 1004 4.218417 ACACTGAACATGTTGCTTATTCCC 59.782 41.667 17.58 0.00 0.00 3.97
988 1005 3.763897 ACTGAACATGTTGCTTATTCCCC 59.236 43.478 17.58 0.00 0.00 4.81
989 1006 3.763360 CTGAACATGTTGCTTATTCCCCA 59.237 43.478 17.58 2.48 0.00 4.96
990 1007 3.509575 TGAACATGTTGCTTATTCCCCAC 59.490 43.478 17.58 0.00 0.00 4.61
991 1008 2.091541 ACATGTTGCTTATTCCCCACG 58.908 47.619 0.00 0.00 0.00 4.94
992 1009 1.405105 CATGTTGCTTATTCCCCACGG 59.595 52.381 0.00 0.00 0.00 4.94
993 1010 0.322997 TGTTGCTTATTCCCCACGGG 60.323 55.000 0.00 0.00 46.11 5.28
1003 1020 4.506255 CCCACGGGGCCAGATTCC 62.506 72.222 11.67 0.00 35.35 3.01
1005 1022 3.781307 CACGGGGCCAGATTCCGA 61.781 66.667 22.18 0.00 45.96 4.55
1006 1023 3.006728 ACGGGGCCAGATTCCGAA 61.007 61.111 22.18 0.00 45.96 4.30
1007 1024 2.270850 CGGGGCCAGATTCCGAAA 59.729 61.111 11.55 0.00 45.96 3.46
1008 1025 1.152963 CGGGGCCAGATTCCGAAAT 60.153 57.895 11.55 0.00 45.96 2.17
1009 1026 0.107831 CGGGGCCAGATTCCGAAATA 59.892 55.000 11.55 0.00 45.96 1.40
1010 1027 1.878102 CGGGGCCAGATTCCGAAATAG 60.878 57.143 11.55 0.00 45.96 1.73
1011 1028 1.143073 GGGGCCAGATTCCGAAATAGT 59.857 52.381 4.39 0.00 0.00 2.12
1012 1029 2.422945 GGGGCCAGATTCCGAAATAGTT 60.423 50.000 4.39 0.00 0.00 2.24
1013 1030 3.288092 GGGCCAGATTCCGAAATAGTTT 58.712 45.455 4.39 0.00 0.00 2.66
1014 1031 3.699538 GGGCCAGATTCCGAAATAGTTTT 59.300 43.478 4.39 0.00 0.00 2.43
1015 1032 4.440112 GGGCCAGATTCCGAAATAGTTTTG 60.440 45.833 4.39 0.00 0.00 2.44
1016 1033 4.105486 GCCAGATTCCGAAATAGTTTTGC 58.895 43.478 0.00 0.00 0.00 3.68
1017 1034 4.672409 CCAGATTCCGAAATAGTTTTGCC 58.328 43.478 0.00 0.00 0.00 4.52
1018 1035 4.440112 CCAGATTCCGAAATAGTTTTGCCC 60.440 45.833 0.00 0.00 0.00 5.36
1019 1036 3.377172 AGATTCCGAAATAGTTTTGCCCG 59.623 43.478 0.00 0.00 0.00 6.13
1020 1037 1.455248 TCCGAAATAGTTTTGCCCGG 58.545 50.000 0.00 0.00 33.36 5.73
1021 1038 1.003349 TCCGAAATAGTTTTGCCCGGA 59.997 47.619 0.73 0.00 36.78 5.14
1022 1039 1.400494 CCGAAATAGTTTTGCCCGGAG 59.600 52.381 0.73 0.00 33.71 4.63
1035 1052 3.303189 CGGAGGTCAGATGTGCCT 58.697 61.111 5.68 5.68 34.15 4.75
1036 1053 1.153489 CGGAGGTCAGATGTGCCTG 60.153 63.158 9.95 0.00 32.32 4.85
1037 1054 1.607801 CGGAGGTCAGATGTGCCTGA 61.608 60.000 9.95 0.00 40.57 3.86
1038 1055 0.615331 GGAGGTCAGATGTGCCTGAA 59.385 55.000 9.95 0.00 43.94 3.02
1039 1056 1.406614 GGAGGTCAGATGTGCCTGAAG 60.407 57.143 9.95 0.00 43.94 3.02
1040 1057 1.277557 GAGGTCAGATGTGCCTGAAGT 59.722 52.381 9.95 0.00 43.94 3.01
1041 1058 1.277557 AGGTCAGATGTGCCTGAAGTC 59.722 52.381 5.27 0.00 43.94 3.01
1042 1059 1.677217 GGTCAGATGTGCCTGAAGTCC 60.677 57.143 0.00 0.00 43.94 3.85
1043 1060 0.615331 TCAGATGTGCCTGAAGTCCC 59.385 55.000 0.00 0.00 39.96 4.46
1044 1061 0.617413 CAGATGTGCCTGAAGTCCCT 59.383 55.000 0.00 0.00 36.29 4.20
1045 1062 0.908198 AGATGTGCCTGAAGTCCCTC 59.092 55.000 0.00 0.00 0.00 4.30
1046 1063 0.615331 GATGTGCCTGAAGTCCCTCA 59.385 55.000 0.00 0.00 0.00 3.86
1047 1064 1.003580 GATGTGCCTGAAGTCCCTCAA 59.996 52.381 0.00 0.00 0.00 3.02
1048 1065 0.843309 TGTGCCTGAAGTCCCTCAAA 59.157 50.000 0.00 0.00 0.00 2.69
1049 1066 1.202806 TGTGCCTGAAGTCCCTCAAAG 60.203 52.381 0.00 0.00 0.00 2.77
1050 1067 1.072331 GTGCCTGAAGTCCCTCAAAGA 59.928 52.381 0.00 0.00 0.00 2.52
1051 1068 1.349026 TGCCTGAAGTCCCTCAAAGAG 59.651 52.381 0.00 0.00 0.00 2.85
1052 1069 1.948144 GCCTGAAGTCCCTCAAAGAGC 60.948 57.143 0.00 0.00 0.00 4.09
1053 1070 1.339535 CCTGAAGTCCCTCAAAGAGCC 60.340 57.143 0.00 0.00 0.00 4.70
1054 1071 1.349026 CTGAAGTCCCTCAAAGAGCCA 59.651 52.381 0.00 0.00 0.00 4.75
1055 1072 1.774254 TGAAGTCCCTCAAAGAGCCAA 59.226 47.619 0.00 0.00 0.00 4.52
1056 1073 2.174639 TGAAGTCCCTCAAAGAGCCAAA 59.825 45.455 0.00 0.00 0.00 3.28
1057 1074 3.181429 TGAAGTCCCTCAAAGAGCCAAAT 60.181 43.478 0.00 0.00 0.00 2.32
1058 1075 3.532641 AGTCCCTCAAAGAGCCAAATT 57.467 42.857 0.00 0.00 0.00 1.82
1059 1076 3.849527 AGTCCCTCAAAGAGCCAAATTT 58.150 40.909 0.00 0.00 0.00 1.82
1060 1077 4.998051 AGTCCCTCAAAGAGCCAAATTTA 58.002 39.130 0.00 0.00 0.00 1.40
1061 1078 5.583932 AGTCCCTCAAAGAGCCAAATTTAT 58.416 37.500 0.00 0.00 0.00 1.40
1062 1079 6.731467 AGTCCCTCAAAGAGCCAAATTTATA 58.269 36.000 0.00 0.00 0.00 0.98
1063 1080 6.830838 AGTCCCTCAAAGAGCCAAATTTATAG 59.169 38.462 0.00 0.00 0.00 1.31
1064 1081 6.828785 GTCCCTCAAAGAGCCAAATTTATAGA 59.171 38.462 0.00 0.00 0.00 1.98
1065 1082 7.012799 GTCCCTCAAAGAGCCAAATTTATAGAG 59.987 40.741 0.00 0.00 0.00 2.43
1066 1083 7.056635 CCCTCAAAGAGCCAAATTTATAGAGA 58.943 38.462 0.00 0.00 0.00 3.10
1067 1084 7.557719 CCCTCAAAGAGCCAAATTTATAGAGAA 59.442 37.037 0.00 0.00 0.00 2.87
1068 1085 8.960591 CCTCAAAGAGCCAAATTTATAGAGAAA 58.039 33.333 0.00 0.00 0.00 2.52
1092 1109 6.934048 AAAAATTATGAGACTAGCAGAGGC 57.066 37.500 0.00 0.00 41.61 4.70
1102 1119 2.435059 GCAGAGGCGTCCCTGAAC 60.435 66.667 1.37 0.00 43.12 3.18
1103 1120 2.125912 CAGAGGCGTCCCTGAACG 60.126 66.667 0.00 0.00 43.12 3.95
1104 1121 3.382832 AGAGGCGTCCCTGAACGG 61.383 66.667 2.06 0.00 43.12 4.44
1114 1131 3.568093 CCTGAACGGGCTTTGTTTG 57.432 52.632 0.00 0.00 0.00 2.93
1115 1132 0.744281 CCTGAACGGGCTTTGTTTGT 59.256 50.000 0.00 0.00 0.00 2.83
1116 1133 1.136110 CCTGAACGGGCTTTGTTTGTT 59.864 47.619 0.00 0.00 0.00 2.83
1117 1134 2.192624 CTGAACGGGCTTTGTTTGTTG 58.807 47.619 0.00 0.00 0.00 3.33
1132 1149 3.621805 TTGTCGCTTGAGGCCCGA 61.622 61.111 0.00 0.00 37.74 5.14
1158 1175 4.424711 GCCGGCCCAGTCCATGAA 62.425 66.667 18.11 0.00 0.00 2.57
1169 1186 1.276138 AGTCCATGAATCGCTCACACA 59.724 47.619 0.00 0.00 36.69 3.72
1179 1196 3.353836 CTCACACAAACGCCCGGG 61.354 66.667 19.09 19.09 0.00 5.73
1196 1214 2.644992 GGCACAAACCCAAGCTCG 59.355 61.111 0.00 0.00 0.00 5.03
1202 1220 3.767630 AAACCCAAGCTCGCCACGT 62.768 57.895 0.00 0.00 0.00 4.49
1219 1237 1.448013 GTTACTCCCACTCCAGCGC 60.448 63.158 0.00 0.00 0.00 5.92
1280 1299 2.367512 GCCATCTCCCCCACCTCT 60.368 66.667 0.00 0.00 0.00 3.69
1285 1304 2.948801 ATCTCCCCCACCTCTACGCC 62.949 65.000 0.00 0.00 0.00 5.68
1329 1355 4.292178 GCTCGGATGGCGGGAGAG 62.292 72.222 0.00 0.00 0.00 3.20
1508 1534 3.566742 GCCGGTAAAAAGAAAGACTCCAA 59.433 43.478 1.90 0.00 0.00 3.53
1522 1548 2.192608 CTCCAACTTTGCTGCGCCTC 62.193 60.000 4.18 0.00 0.00 4.70
1546 1574 8.964476 TCTAAATGATGTACCTGGAAGATTTC 57.036 34.615 0.00 0.00 34.07 2.17
1548 1576 4.819105 TGATGTACCTGGAAGATTTCGT 57.181 40.909 0.00 0.00 34.07 3.85
1565 1593 1.202582 TCGTGCTTAGAGCTCTGTTCC 59.797 52.381 26.78 11.83 42.97 3.62
1568 1596 3.194062 GTGCTTAGAGCTCTGTTCCATC 58.806 50.000 26.78 8.45 42.97 3.51
1607 1672 6.071984 TCTGGAGTGGAAGGAGTATTAGATC 58.928 44.000 0.00 0.00 0.00 2.75
1720 1799 5.036737 GCATATGTTGAACTGGTTACATGC 58.963 41.667 4.29 5.98 33.58 4.06
1748 1827 6.582636 ACAAAGTTGTTGTGAGAGTATCAGA 58.417 36.000 0.00 0.00 36.94 3.27
1749 1828 6.703607 ACAAAGTTGTTGTGAGAGTATCAGAG 59.296 38.462 0.00 0.00 36.94 3.35
1800 1894 3.569491 CATCCCAACCTGAATAATGCCT 58.431 45.455 0.00 0.00 0.00 4.75
1801 1895 3.756082 TCCCAACCTGAATAATGCCTT 57.244 42.857 0.00 0.00 0.00 4.35
1957 2088 8.582433 CCAAAATGGTTAAACTTAAATCGTGT 57.418 30.769 0.00 0.00 31.35 4.49
1974 2105 6.570672 ATCGTGTACTCTTACTTTCAGTCA 57.429 37.500 0.00 0.00 0.00 3.41
2052 2183 4.215399 CAGTTTGTGTACCGACATCCAAAT 59.785 41.667 0.00 0.00 35.33 2.32
2060 2191 1.211949 CCGACATCCAAATGGGTAGGT 59.788 52.381 0.00 0.00 37.19 3.08
2125 2270 6.630444 ATTTGCTTTCTCATGATTAGCGAT 57.370 33.333 15.05 10.63 34.78 4.58
2140 2285 9.950496 ATGATTAGCGATAATAAATGGTCTTCT 57.050 29.630 5.80 0.00 0.00 2.85
2147 2292 7.630924 CGATAATAAATGGTCTTCTGGTGAAC 58.369 38.462 0.00 0.00 0.00 3.18
2313 2460 2.672478 GCAACTCTAGTCGACACATGCT 60.672 50.000 19.50 0.00 0.00 3.79
2319 2466 6.496571 ACTCTAGTCGACACATGCTAATAAC 58.503 40.000 19.50 0.00 0.00 1.89
2393 2541 7.745620 TCTCTTTGGTTTCTTATGTTCCTTC 57.254 36.000 0.00 0.00 0.00 3.46
2539 2687 5.234752 GGAAACGCAAAAGGGTAATTTGAT 58.765 37.500 3.37 0.00 39.56 2.57
2540 2688 5.699001 GGAAACGCAAAAGGGTAATTTGATT 59.301 36.000 3.37 0.00 39.56 2.57
2541 2689 6.347321 GGAAACGCAAAAGGGTAATTTGATTG 60.347 38.462 3.37 0.00 39.56 2.67
2542 2690 5.461032 ACGCAAAAGGGTAATTTGATTGA 57.539 34.783 3.37 0.00 39.56 2.57
2552 2700 8.154649 AGGGTAATTTGATTGATTGACGTATC 57.845 34.615 0.00 0.00 0.00 2.24
2556 2704 9.651718 GTAATTTGATTGATTGACGTATCTTCC 57.348 33.333 0.00 0.00 0.00 3.46
2761 2909 4.210537 AGTGTTGTCTACGTTCAATTTCCG 59.789 41.667 0.00 0.00 0.00 4.30
2899 3047 2.319136 TAGTGTGGCTTGTCGTTGTT 57.681 45.000 0.00 0.00 0.00 2.83
3033 3184 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3121 3272 7.731688 ACATATATTTAGGAACGGAGGGAGTAA 59.268 37.037 0.00 0.00 0.00 2.24
3196 4641 4.019860 AGCCTTTATGATCCATGCGTATCT 60.020 41.667 0.00 0.00 0.00 1.98
3208 4653 4.447054 CCATGCGTATCTGAGAGATGTTTC 59.553 45.833 0.00 0.00 35.37 2.78
3258 4703 1.676006 GGTGTTGTTCCCAAGTGAGTG 59.324 52.381 0.00 0.00 0.00 3.51
3303 4748 4.813697 GTGCAACCTTGAGAGGAATATCTC 59.186 45.833 0.00 0.00 46.74 2.75
3433 4879 5.913137 TTTCATGTTTTGTCCAGAAGTGT 57.087 34.783 0.00 0.00 0.00 3.55
3459 4905 2.576615 GAAACCTTGCCTGTGAAGAGT 58.423 47.619 0.00 0.00 0.00 3.24
3462 4908 1.071385 ACCTTGCCTGTGAAGAGTCTG 59.929 52.381 0.00 0.00 0.00 3.51
3463 4909 1.071385 CCTTGCCTGTGAAGAGTCTGT 59.929 52.381 0.00 0.00 0.00 3.41
3464 4910 2.486191 CCTTGCCTGTGAAGAGTCTGTT 60.486 50.000 0.00 0.00 0.00 3.16
3544 4999 7.921786 TTTTTCTGAAACAGAGAAAGAGACA 57.078 32.000 11.51 0.00 41.75 3.41
3612 5068 2.069273 CAAAAGGCGTACTCTCCACAG 58.931 52.381 0.00 0.00 0.00 3.66
3671 5131 1.523758 TTTTCGCTCCTTGGCTTCTC 58.476 50.000 0.00 0.00 0.00 2.87
3675 5135 1.524482 GCTCCTTGGCTTCTCCGAT 59.476 57.895 0.00 0.00 37.80 4.18
3678 5138 0.537188 TCCTTGGCTTCTCCGATGAC 59.463 55.000 0.00 0.00 37.80 3.06
3880 5348 7.869429 CAGTGATAACCTTTTGCTTTCAAAGAT 59.131 33.333 0.00 0.00 42.50 2.40
3921 5389 3.938963 GCATATTTCCGGACTTTGACTCA 59.061 43.478 1.83 0.00 0.00 3.41
4011 5483 4.888038 GCACATGCACATCTGATTCTTA 57.112 40.909 0.00 0.00 41.59 2.10
4188 5759 3.181458 ACCTTTACCGGCGTGATATGAAT 60.181 43.478 6.01 0.00 0.00 2.57
4492 7322 7.083858 CCAGTTCATTCGCTTATCTTTGAAAA 58.916 34.615 0.00 0.00 0.00 2.29
4547 7377 4.785511 TCCTGACTACCTTTCTTCTTCG 57.214 45.455 0.00 0.00 0.00 3.79
4562 7395 4.156922 TCTTCTTCGCTTCTGTTCTCCTAG 59.843 45.833 0.00 0.00 0.00 3.02
4572 7405 6.091986 GCTTCTGTTCTCCTAGATGTTTCTTG 59.908 42.308 0.00 0.00 33.17 3.02
4622 7552 4.081642 TCCCAAGACAACTACTAGCACATC 60.082 45.833 0.00 0.00 0.00 3.06
4650 7580 4.806330 TCGTCTATCGAAACAAAAGCTCT 58.194 39.130 0.00 0.00 45.98 4.09
4685 7615 7.325660 AGCATACAAGGTTCACATTAGATTG 57.674 36.000 0.00 0.00 0.00 2.67
4771 7705 2.232941 AGGCAATGCTTCAACCAATGAG 59.767 45.455 4.82 0.00 39.77 2.90
4820 7754 8.924511 ATTATGAATTTATGATCGGTTGGACT 57.075 30.769 0.00 0.00 0.00 3.85
4823 7757 6.176896 TGAATTTATGATCGGTTGGACTTGA 58.823 36.000 0.00 0.00 0.00 3.02
4839 7773 4.562789 GGACTTGAACAAAGCTTGTGTTTC 59.437 41.667 20.48 15.65 44.59 2.78
4883 7817 4.827835 TGGTTCAATTAATGACGAAACCCA 59.172 37.500 11.85 7.47 37.92 4.51
4919 7854 6.280643 ACTGCTTCCCTTCAAATAAACAAAC 58.719 36.000 0.00 0.00 0.00 2.93
4921 7856 6.279882 TGCTTCCCTTCAAATAAACAAACAG 58.720 36.000 0.00 0.00 0.00 3.16
4922 7857 5.177511 GCTTCCCTTCAAATAAACAAACAGC 59.822 40.000 0.00 0.00 0.00 4.40
4926 7861 6.760770 TCCCTTCAAATAAACAAACAGCTTTG 59.239 34.615 0.00 0.00 42.33 2.77
4927 7862 6.421405 CCTTCAAATAAACAAACAGCTTTGC 58.579 36.000 0.00 0.00 40.57 3.68
4928 7863 6.258507 CCTTCAAATAAACAAACAGCTTTGCT 59.741 34.615 0.00 0.00 40.57 3.91
4930 7865 7.928908 TCAAATAAACAAACAGCTTTGCTAG 57.071 32.000 0.00 0.00 40.57 3.42
4931 7866 7.711846 TCAAATAAACAAACAGCTTTGCTAGA 58.288 30.769 0.00 0.00 40.57 2.43
4932 7867 8.194104 TCAAATAAACAAACAGCTTTGCTAGAA 58.806 29.630 0.00 0.00 40.57 2.10
4933 7868 7.930513 AATAAACAAACAGCTTTGCTAGAAC 57.069 32.000 0.00 0.00 40.57 3.01
4934 7869 5.582689 AAACAAACAGCTTTGCTAGAACT 57.417 34.783 0.00 0.00 40.57 3.01
4935 7870 4.820284 ACAAACAGCTTTGCTAGAACTC 57.180 40.909 0.00 0.00 40.57 3.01
4936 7871 4.199310 ACAAACAGCTTTGCTAGAACTCA 58.801 39.130 0.00 0.00 40.57 3.41
4937 7872 4.823989 ACAAACAGCTTTGCTAGAACTCAT 59.176 37.500 0.00 0.00 40.57 2.90
4938 7873 5.049129 ACAAACAGCTTTGCTAGAACTCATC 60.049 40.000 0.00 0.00 40.57 2.92
4939 7874 4.550076 ACAGCTTTGCTAGAACTCATCT 57.450 40.909 0.00 0.00 42.48 2.90
4940 7875 5.667539 ACAGCTTTGCTAGAACTCATCTA 57.332 39.130 0.00 0.00 39.71 1.98
4968 7903 8.908786 TGAGATATAATTTGGTCTCATTCACC 57.091 34.615 10.50 0.00 41.40 4.02
4969 7904 8.717717 TGAGATATAATTTGGTCTCATTCACCT 58.282 33.333 10.50 0.00 41.40 4.00
4970 7905 9.566432 GAGATATAATTTGGTCTCATTCACCTT 57.434 33.333 8.11 0.00 37.60 3.50
4971 7906 9.927081 AGATATAATTTGGTCTCATTCACCTTT 57.073 29.630 0.00 0.00 34.66 3.11
4977 7912 7.391148 TTTGGTCTCATTCACCTTTTATAGC 57.609 36.000 0.00 0.00 34.66 2.97
4978 7913 5.437060 TGGTCTCATTCACCTTTTATAGCC 58.563 41.667 0.00 0.00 34.66 3.93
4979 7914 5.045213 TGGTCTCATTCACCTTTTATAGCCA 60.045 40.000 0.00 0.00 34.66 4.75
4980 7915 6.064717 GGTCTCATTCACCTTTTATAGCCAT 58.935 40.000 0.00 0.00 0.00 4.40
4981 7916 6.547510 GGTCTCATTCACCTTTTATAGCCATT 59.452 38.462 0.00 0.00 0.00 3.16
4982 7917 7.420800 GTCTCATTCACCTTTTATAGCCATTG 58.579 38.462 0.00 0.00 0.00 2.82
4983 7918 6.547141 TCTCATTCACCTTTTATAGCCATTGG 59.453 38.462 0.00 0.00 0.00 3.16
4984 7919 6.430864 TCATTCACCTTTTATAGCCATTGGA 58.569 36.000 6.95 0.00 0.00 3.53
4985 7920 7.068702 TCATTCACCTTTTATAGCCATTGGAT 58.931 34.615 6.95 1.78 0.00 3.41
4986 7921 6.713762 TTCACCTTTTATAGCCATTGGATG 57.286 37.500 6.95 0.00 0.00 3.51
4987 7922 5.765510 TCACCTTTTATAGCCATTGGATGT 58.234 37.500 6.95 0.10 0.00 3.06
4988 7923 5.593909 TCACCTTTTATAGCCATTGGATGTG 59.406 40.000 6.95 2.95 0.00 3.21
4989 7924 5.593909 CACCTTTTATAGCCATTGGATGTGA 59.406 40.000 6.95 0.00 0.00 3.58
4990 7925 6.266103 CACCTTTTATAGCCATTGGATGTGAT 59.734 38.462 6.95 0.00 0.00 3.06
4991 7926 6.266103 ACCTTTTATAGCCATTGGATGTGATG 59.734 38.462 6.95 0.00 0.00 3.07
4992 7927 5.710513 TTTATAGCCATTGGATGTGATGC 57.289 39.130 6.95 0.00 0.00 3.91
4993 7928 3.520691 ATAGCCATTGGATGTGATGCT 57.479 42.857 6.95 0.00 0.00 3.79
4994 7929 4.645863 ATAGCCATTGGATGTGATGCTA 57.354 40.909 6.95 0.00 0.00 3.49
4995 7930 3.520691 AGCCATTGGATGTGATGCTAT 57.479 42.857 6.95 0.00 0.00 2.97
4996 7931 4.645863 AGCCATTGGATGTGATGCTATA 57.354 40.909 6.95 0.00 0.00 1.31
4997 7932 4.989277 AGCCATTGGATGTGATGCTATAA 58.011 39.130 6.95 0.00 0.00 0.98
4998 7933 5.008331 AGCCATTGGATGTGATGCTATAAG 58.992 41.667 6.95 0.00 0.00 1.73
4999 7934 5.005740 GCCATTGGATGTGATGCTATAAGA 58.994 41.667 6.95 0.00 0.00 2.10
5000 7935 5.651139 GCCATTGGATGTGATGCTATAAGAT 59.349 40.000 6.95 0.00 0.00 2.40
5001 7936 6.404403 GCCATTGGATGTGATGCTATAAGATG 60.404 42.308 6.95 0.00 0.00 2.90
5002 7937 6.657966 CCATTGGATGTGATGCTATAAGATGT 59.342 38.462 0.00 0.00 0.00 3.06
5003 7938 7.361799 CCATTGGATGTGATGCTATAAGATGTG 60.362 40.741 0.00 0.00 0.00 3.21
5004 7939 6.178607 TGGATGTGATGCTATAAGATGTGT 57.821 37.500 0.00 0.00 0.00 3.72
5005 7940 5.993441 TGGATGTGATGCTATAAGATGTGTG 59.007 40.000 0.00 0.00 0.00 3.82
5006 7941 5.994054 GGATGTGATGCTATAAGATGTGTGT 59.006 40.000 0.00 0.00 0.00 3.72
5007 7942 6.073385 GGATGTGATGCTATAAGATGTGTGTG 60.073 42.308 0.00 0.00 0.00 3.82
5008 7943 5.733676 TGTGATGCTATAAGATGTGTGTGT 58.266 37.500 0.00 0.00 0.00 3.72
5009 7944 5.581874 TGTGATGCTATAAGATGTGTGTGTG 59.418 40.000 0.00 0.00 0.00 3.82
5010 7945 4.571984 TGATGCTATAAGATGTGTGTGTGC 59.428 41.667 0.00 0.00 0.00 4.57
5011 7946 4.206477 TGCTATAAGATGTGTGTGTGCT 57.794 40.909 0.00 0.00 0.00 4.40
5012 7947 3.934579 TGCTATAAGATGTGTGTGTGCTG 59.065 43.478 0.00 0.00 0.00 4.41
5013 7948 4.183865 GCTATAAGATGTGTGTGTGCTGA 58.816 43.478 0.00 0.00 0.00 4.26
5014 7949 4.033358 GCTATAAGATGTGTGTGTGCTGAC 59.967 45.833 0.00 0.00 0.00 3.51
5015 7950 1.220529 AAGATGTGTGTGTGCTGACG 58.779 50.000 0.00 0.00 0.00 4.35
5016 7951 0.104855 AGATGTGTGTGTGCTGACGT 59.895 50.000 0.00 0.00 0.00 4.34
5017 7952 0.233074 GATGTGTGTGTGCTGACGTG 59.767 55.000 0.00 0.00 0.00 4.49
5018 7953 1.159713 ATGTGTGTGTGCTGACGTGG 61.160 55.000 0.00 0.00 0.00 4.94
5019 7954 1.520564 GTGTGTGTGCTGACGTGGA 60.521 57.895 0.00 0.00 0.00 4.02
5020 7955 0.880278 GTGTGTGTGCTGACGTGGAT 60.880 55.000 0.00 0.00 0.00 3.41
5021 7956 0.179059 TGTGTGTGCTGACGTGGATT 60.179 50.000 0.00 0.00 0.00 3.01
5022 7957 0.235665 GTGTGTGCTGACGTGGATTG 59.764 55.000 0.00 0.00 0.00 2.67
5023 7958 0.179059 TGTGTGCTGACGTGGATTGT 60.179 50.000 0.00 0.00 0.00 2.71
5024 7959 1.069358 TGTGTGCTGACGTGGATTGTA 59.931 47.619 0.00 0.00 0.00 2.41
5025 7960 2.289382 TGTGTGCTGACGTGGATTGTAT 60.289 45.455 0.00 0.00 0.00 2.29
5026 7961 3.056465 TGTGTGCTGACGTGGATTGTATA 60.056 43.478 0.00 0.00 0.00 1.47
5027 7962 4.119862 GTGTGCTGACGTGGATTGTATAT 58.880 43.478 0.00 0.00 0.00 0.86
5028 7963 4.025730 GTGTGCTGACGTGGATTGTATATG 60.026 45.833 0.00 0.00 0.00 1.78
5029 7964 4.119862 GTGCTGACGTGGATTGTATATGT 58.880 43.478 0.00 0.00 0.00 2.29
5030 7965 4.570772 GTGCTGACGTGGATTGTATATGTT 59.429 41.667 0.00 0.00 0.00 2.71
5031 7966 4.808895 TGCTGACGTGGATTGTATATGTTC 59.191 41.667 0.00 0.00 0.00 3.18
5032 7967 5.050490 GCTGACGTGGATTGTATATGTTCT 58.950 41.667 0.00 0.00 0.00 3.01
5033 7968 5.523916 GCTGACGTGGATTGTATATGTTCTT 59.476 40.000 0.00 0.00 0.00 2.52
5034 7969 6.510157 GCTGACGTGGATTGTATATGTTCTTG 60.510 42.308 0.00 0.00 0.00 3.02
5035 7970 6.403049 TGACGTGGATTGTATATGTTCTTGT 58.597 36.000 0.00 0.00 0.00 3.16
5036 7971 6.876789 TGACGTGGATTGTATATGTTCTTGTT 59.123 34.615 0.00 0.00 0.00 2.83
5037 7972 7.389330 TGACGTGGATTGTATATGTTCTTGTTT 59.611 33.333 0.00 0.00 0.00 2.83
5038 7973 8.106247 ACGTGGATTGTATATGTTCTTGTTTT 57.894 30.769 0.00 0.00 0.00 2.43
5039 7974 8.234546 ACGTGGATTGTATATGTTCTTGTTTTC 58.765 33.333 0.00 0.00 0.00 2.29
5040 7975 8.233868 CGTGGATTGTATATGTTCTTGTTTTCA 58.766 33.333 0.00 0.00 0.00 2.69
5041 7976 9.906660 GTGGATTGTATATGTTCTTGTTTTCAA 57.093 29.630 0.00 0.00 38.21 2.69
5051 7986 8.638685 ATGTTCTTGTTTTCAAAGTGAATGAG 57.361 30.769 0.00 0.00 39.47 2.90
5052 7987 7.825681 TGTTCTTGTTTTCAAAGTGAATGAGA 58.174 30.769 0.00 0.00 39.47 3.27
5053 7988 7.754924 TGTTCTTGTTTTCAAAGTGAATGAGAC 59.245 33.333 0.00 0.00 39.47 3.36
5054 7989 6.795399 TCTTGTTTTCAAAGTGAATGAGACC 58.205 36.000 0.00 0.00 39.47 3.85
5055 7990 6.376864 TCTTGTTTTCAAAGTGAATGAGACCA 59.623 34.615 0.00 0.00 39.47 4.02
5056 7991 6.522625 TGTTTTCAAAGTGAATGAGACCAA 57.477 33.333 0.00 0.00 36.11 3.67
5057 7992 6.929625 TGTTTTCAAAGTGAATGAGACCAAA 58.070 32.000 0.00 0.00 36.11 3.28
5058 7993 7.555087 TGTTTTCAAAGTGAATGAGACCAAAT 58.445 30.769 0.00 0.00 36.11 2.32
5059 7994 8.040132 TGTTTTCAAAGTGAATGAGACCAAATT 58.960 29.630 0.00 0.00 36.11 1.82
5060 7995 9.528018 GTTTTCAAAGTGAATGAGACCAAATTA 57.472 29.630 0.00 0.00 36.11 1.40
5090 8025 7.455058 TCATCTAGATGAGTTCTAGGTACTCC 58.545 42.308 27.93 8.04 44.99 3.85
5093 8028 5.411103 AGATGAGTTCTAGGTACTCCCAT 57.589 43.478 17.72 9.94 41.02 4.00
5097 8032 6.786967 TGAGTTCTAGGTACTCCCATAAAC 57.213 41.667 17.72 0.51 41.02 2.01
5101 8036 8.159229 AGTTCTAGGTACTCCCATAAACAAAT 57.841 34.615 0.00 0.00 41.75 2.32
5102 8037 8.265764 AGTTCTAGGTACTCCCATAAACAAATC 58.734 37.037 0.00 0.00 41.75 2.17
5104 8039 6.906901 TCTAGGTACTCCCATAAACAAATCCT 59.093 38.462 0.00 0.00 41.75 3.24
5108 8043 6.661805 GGTACTCCCATAAACAAATCCTTTCA 59.338 38.462 0.00 0.00 0.00 2.69
5111 8046 6.036577 TCCCATAAACAAATCCTTTCAAGC 57.963 37.500 0.00 0.00 0.00 4.01
5112 8047 4.864247 CCCATAAACAAATCCTTTCAAGCG 59.136 41.667 0.00 0.00 0.00 4.68
5140 8075 6.479006 AGTTCTTGTGGATGATTTCATGAGA 58.521 36.000 0.00 0.00 36.57 3.27
5141 8076 6.373774 AGTTCTTGTGGATGATTTCATGAGAC 59.626 38.462 0.00 0.00 36.57 3.36
5190 8125 2.890311 TGTAGTGAAGGCCCAAACATTG 59.110 45.455 0.00 0.00 0.00 2.82
5211 8146 4.343231 TGCATTATCATGTCCTTGTTGGT 58.657 39.130 0.00 0.00 37.07 3.67
5218 8153 1.388547 TGTCCTTGTTGGTTGTGCTC 58.611 50.000 0.00 0.00 37.07 4.26
5233 8890 1.744741 GCTCTCAGCCAACTCCTGC 60.745 63.158 0.00 0.00 34.48 4.85
5262 8946 2.416431 GGAACACCAGATGCAGCATTTC 60.416 50.000 9.90 7.95 0.00 2.17
5274 8964 8.449397 CAGATGCAGCATTTCCTATCTAATAAC 58.551 37.037 9.90 0.00 0.00 1.89
5298 8988 7.268586 ACTAACATGAAGCTAATGTACTCCAG 58.731 38.462 13.70 9.40 37.27 3.86
5299 8989 5.683876 ACATGAAGCTAATGTACTCCAGT 57.316 39.130 12.12 0.00 36.50 4.00
5300 8990 6.054860 ACATGAAGCTAATGTACTCCAGTT 57.945 37.500 12.12 0.00 36.50 3.16
5301 8991 5.877012 ACATGAAGCTAATGTACTCCAGTTG 59.123 40.000 12.12 0.00 36.50 3.16
5302 8992 4.832248 TGAAGCTAATGTACTCCAGTTGG 58.168 43.478 0.00 0.00 0.00 3.77
5305 8999 4.579869 AGCTAATGTACTCCAGTTGGTTG 58.420 43.478 0.00 0.00 36.34 3.77
5341 9035 3.631250 AGGTTTTTCCTTCTCAAGTGCA 58.369 40.909 0.00 0.00 45.67 4.57
5366 9060 2.158813 TCCACGAGCTGAATATTTCCCC 60.159 50.000 0.00 0.00 0.00 4.81
5486 9180 3.286353 TGACCACTGCACAAAAGAATCA 58.714 40.909 0.00 0.00 0.00 2.57
5487 9181 3.316029 TGACCACTGCACAAAAGAATCAG 59.684 43.478 0.00 0.00 0.00 2.90
5512 9206 4.380655 CCGATTTATTAGGGGAGTAGCTCG 60.381 50.000 0.00 0.00 0.00 5.03
5513 9207 4.458295 CGATTTATTAGGGGAGTAGCTCGA 59.542 45.833 0.00 0.00 0.00 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 4.454948 TGTCGGCCACAGAAACAG 57.545 55.556 2.24 0.00 0.00 3.16
146 148 0.464452 CCCCGTGGACTCCTTGATAC 59.536 60.000 0.00 0.00 0.00 2.24
161 163 1.470098 CAAAAGACAGCTTGATCCCCG 59.530 52.381 0.00 0.00 33.79 5.73
194 205 3.927142 GGAGAGATAGTCAAACAACCACG 59.073 47.826 0.00 0.00 0.00 4.94
240 251 6.191657 TGCCAGATGGTGATAGTGATAATT 57.808 37.500 0.00 0.00 37.57 1.40
246 257 6.053650 CCATATATGCCAGATGGTGATAGTG 58.946 44.000 7.24 2.43 40.57 2.74
277 288 3.569701 GGTTCATTTCTTGCAGAGTTCCA 59.430 43.478 0.00 0.00 0.00 3.53
291 302 3.073650 AGTGAGGAGCTTCAGGTTCATTT 59.926 43.478 0.00 0.00 0.00 2.32
342 353 7.070571 GCTGGAAGACCATATCTATATAAGCCT 59.929 40.741 0.00 0.00 45.87 4.58
359 370 3.198872 GCTTGTATAGGTGCTGGAAGAC 58.801 50.000 0.00 0.00 34.07 3.01
387 401 1.071699 GGGTCTCACACCTAGTTGCAA 59.928 52.381 0.00 0.00 45.95 4.08
418 432 1.735376 GCGGCGGAGACCATAGAGAA 61.735 60.000 9.78 0.00 0.00 2.87
451 465 1.339438 GCAGCATCAGAGGAAACCAGA 60.339 52.381 0.00 0.00 0.00 3.86
627 641 4.261405 CGATCACATCAGAGTAGTTCTCCC 60.261 50.000 0.00 0.00 43.71 4.30
655 670 0.523966 CCACAGAGAGACAGTCCGAC 59.476 60.000 0.00 0.00 0.00 4.79
702 717 1.452108 GATCCCACAAAGGAGCGGG 60.452 63.158 0.00 0.00 39.95 6.13
738 753 2.777832 AAGAGCTCCAGTTGTCATCC 57.222 50.000 10.93 0.00 0.00 3.51
763 778 2.032894 ACGAACATGCTTGAAAGTCACG 60.033 45.455 6.60 0.00 0.00 4.35
844 859 1.135575 CCGGAGCAGACTGAAAAATGC 60.136 52.381 6.65 0.00 38.97 3.56
845 860 2.426522 TCCGGAGCAGACTGAAAAATG 58.573 47.619 6.65 0.00 0.00 2.32
854 871 2.156343 GGATACAATCCGGAGCAGAC 57.844 55.000 11.34 0.00 40.13 3.51
935 952 2.965462 GCGCCGACCCCGAAATAG 60.965 66.667 0.00 0.00 38.22 1.73
936 953 4.534141 GGCGCCGACCCCGAAATA 62.534 66.667 12.58 0.00 38.22 1.40
945 962 3.353836 ATGTGTTGTGGCGCCGAC 61.354 61.111 23.90 20.68 0.00 4.79
946 963 3.353029 CATGTGTTGTGGCGCCGA 61.353 61.111 23.90 8.13 0.00 5.54
947 964 3.353029 TCATGTGTTGTGGCGCCG 61.353 61.111 23.90 3.56 0.00 6.46
948 965 2.255252 GTCATGTGTTGTGGCGCC 59.745 61.111 22.73 22.73 0.00 6.53
949 966 1.370414 GTGTCATGTGTTGTGGCGC 60.370 57.895 0.00 0.00 0.00 6.53
950 967 0.041047 CAGTGTCATGTGTTGTGGCG 60.041 55.000 0.00 0.00 0.00 5.69
951 968 1.308047 TCAGTGTCATGTGTTGTGGC 58.692 50.000 0.00 0.00 0.00 5.01
952 969 2.682352 TGTTCAGTGTCATGTGTTGTGG 59.318 45.455 0.00 0.00 0.00 4.17
953 970 4.284485 CATGTTCAGTGTCATGTGTTGTG 58.716 43.478 16.76 0.00 37.31 3.33
954 971 4.556942 CATGTTCAGTGTCATGTGTTGT 57.443 40.909 16.76 0.00 37.31 3.32
960 977 3.909776 AGCAACATGTTCAGTGTCATG 57.090 42.857 8.48 20.59 44.56 3.07
961 978 6.349611 GGAATAAGCAACATGTTCAGTGTCAT 60.350 38.462 8.48 0.00 0.00 3.06
962 979 5.048782 GGAATAAGCAACATGTTCAGTGTCA 60.049 40.000 8.48 0.00 0.00 3.58
963 980 5.393962 GGAATAAGCAACATGTTCAGTGTC 58.606 41.667 8.48 2.43 0.00 3.67
964 981 4.218417 GGGAATAAGCAACATGTTCAGTGT 59.782 41.667 8.48 0.00 0.00 3.55
965 982 4.380867 GGGGAATAAGCAACATGTTCAGTG 60.381 45.833 8.48 0.00 0.00 3.66
966 983 3.763897 GGGGAATAAGCAACATGTTCAGT 59.236 43.478 8.48 0.00 0.00 3.41
967 984 3.763360 TGGGGAATAAGCAACATGTTCAG 59.237 43.478 8.48 0.00 0.00 3.02
968 985 3.509575 GTGGGGAATAAGCAACATGTTCA 59.490 43.478 8.48 0.00 0.00 3.18
969 986 3.427503 CGTGGGGAATAAGCAACATGTTC 60.428 47.826 8.48 4.08 0.00 3.18
970 987 2.491693 CGTGGGGAATAAGCAACATGTT 59.508 45.455 4.92 4.92 0.00 2.71
971 988 2.091541 CGTGGGGAATAAGCAACATGT 58.908 47.619 0.00 0.00 0.00 3.21
972 989 1.405105 CCGTGGGGAATAAGCAACATG 59.595 52.381 0.00 0.00 34.06 3.21
973 990 1.762708 CCGTGGGGAATAAGCAACAT 58.237 50.000 0.00 0.00 34.06 2.71
974 991 3.257935 CCGTGGGGAATAAGCAACA 57.742 52.632 0.00 0.00 34.06 3.33
987 1004 4.856801 CGGAATCTGGCCCCGTGG 62.857 72.222 9.04 0.00 38.55 4.94
988 1005 2.813226 TTTCGGAATCTGGCCCCGTG 62.813 60.000 15.74 0.00 43.40 4.94
989 1006 1.921869 ATTTCGGAATCTGGCCCCGT 61.922 55.000 15.74 0.00 43.40 5.28
990 1007 0.107831 TATTTCGGAATCTGGCCCCG 59.892 55.000 10.81 10.81 44.22 5.73
991 1008 1.143073 ACTATTTCGGAATCTGGCCCC 59.857 52.381 0.00 0.00 0.00 5.80
992 1009 2.640316 ACTATTTCGGAATCTGGCCC 57.360 50.000 0.00 0.00 0.00 5.80
993 1010 4.672409 CAAAACTATTTCGGAATCTGGCC 58.328 43.478 0.00 0.00 0.00 5.36
994 1011 4.105486 GCAAAACTATTTCGGAATCTGGC 58.895 43.478 0.00 0.00 0.00 4.85
995 1012 4.440112 GGGCAAAACTATTTCGGAATCTGG 60.440 45.833 0.00 0.00 0.00 3.86
996 1013 4.672409 GGGCAAAACTATTTCGGAATCTG 58.328 43.478 0.00 0.00 0.00 2.90
997 1014 3.377172 CGGGCAAAACTATTTCGGAATCT 59.623 43.478 0.00 0.00 0.00 2.40
998 1015 3.488553 CCGGGCAAAACTATTTCGGAATC 60.489 47.826 0.00 0.00 36.20 2.52
999 1016 2.425668 CCGGGCAAAACTATTTCGGAAT 59.574 45.455 0.00 0.00 36.20 3.01
1000 1017 1.813786 CCGGGCAAAACTATTTCGGAA 59.186 47.619 0.00 0.00 36.20 4.30
1001 1018 1.003349 TCCGGGCAAAACTATTTCGGA 59.997 47.619 0.00 0.00 39.02 4.55
1002 1019 1.400494 CTCCGGGCAAAACTATTTCGG 59.600 52.381 0.00 0.00 35.73 4.30
1003 1020 1.400494 CCTCCGGGCAAAACTATTTCG 59.600 52.381 0.00 0.00 0.00 3.46
1004 1021 2.422479 GACCTCCGGGCAAAACTATTTC 59.578 50.000 0.00 0.00 35.63 2.17
1005 1022 2.224917 TGACCTCCGGGCAAAACTATTT 60.225 45.455 0.00 0.00 35.63 1.40
1006 1023 1.353022 TGACCTCCGGGCAAAACTATT 59.647 47.619 0.00 0.00 35.63 1.73
1007 1024 0.988832 TGACCTCCGGGCAAAACTAT 59.011 50.000 0.00 0.00 35.63 2.12
1008 1025 0.323629 CTGACCTCCGGGCAAAACTA 59.676 55.000 0.00 0.00 35.63 2.24
1009 1026 1.073199 CTGACCTCCGGGCAAAACT 59.927 57.895 0.00 0.00 35.63 2.66
1010 1027 0.322546 ATCTGACCTCCGGGCAAAAC 60.323 55.000 0.00 0.00 35.63 2.43
1011 1028 0.322456 CATCTGACCTCCGGGCAAAA 60.322 55.000 0.00 0.00 35.63 2.44
1012 1029 1.299648 CATCTGACCTCCGGGCAAA 59.700 57.895 0.00 0.00 35.63 3.68
1013 1030 1.918293 ACATCTGACCTCCGGGCAA 60.918 57.895 0.00 0.00 35.63 4.52
1014 1031 2.284625 ACATCTGACCTCCGGGCA 60.285 61.111 0.00 0.00 35.63 5.36
1015 1032 2.187946 CACATCTGACCTCCGGGC 59.812 66.667 0.00 0.00 35.63 6.13
1016 1033 2.187946 GCACATCTGACCTCCGGG 59.812 66.667 0.00 0.00 38.88 5.73
1017 1034 2.187946 GGCACATCTGACCTCCGG 59.812 66.667 0.00 0.00 0.00 5.14
1018 1035 1.153489 CAGGCACATCTGACCTCCG 60.153 63.158 0.00 0.00 36.93 4.63
1019 1036 0.615331 TTCAGGCACATCTGACCTCC 59.385 55.000 0.00 0.00 42.74 4.30
1020 1037 1.277557 ACTTCAGGCACATCTGACCTC 59.722 52.381 0.00 0.00 42.74 3.85
1021 1038 1.277557 GACTTCAGGCACATCTGACCT 59.722 52.381 0.00 0.00 42.74 3.85
1022 1039 1.677217 GGACTTCAGGCACATCTGACC 60.677 57.143 0.00 0.00 42.74 4.02
1023 1040 1.677217 GGGACTTCAGGCACATCTGAC 60.677 57.143 0.00 0.00 42.74 3.51
1024 1041 0.615331 GGGACTTCAGGCACATCTGA 59.385 55.000 0.00 0.00 41.51 3.27
1025 1042 0.617413 AGGGACTTCAGGCACATCTG 59.383 55.000 0.00 0.00 27.25 2.90
1026 1043 0.908198 GAGGGACTTCAGGCACATCT 59.092 55.000 0.00 0.00 41.55 2.90
1027 1044 0.615331 TGAGGGACTTCAGGCACATC 59.385 55.000 0.00 0.00 41.55 3.06
1028 1045 1.067295 TTGAGGGACTTCAGGCACAT 58.933 50.000 0.00 0.00 41.55 3.21
1029 1046 0.843309 TTTGAGGGACTTCAGGCACA 59.157 50.000 0.00 0.00 41.55 4.57
1030 1047 1.072331 TCTTTGAGGGACTTCAGGCAC 59.928 52.381 0.00 0.00 41.55 5.01
1031 1048 1.349026 CTCTTTGAGGGACTTCAGGCA 59.651 52.381 0.00 0.00 41.55 4.75
1032 1049 1.948144 GCTCTTTGAGGGACTTCAGGC 60.948 57.143 0.00 0.00 41.55 4.85
1033 1050 1.339535 GGCTCTTTGAGGGACTTCAGG 60.340 57.143 0.00 0.00 41.55 3.86
1034 1051 1.349026 TGGCTCTTTGAGGGACTTCAG 59.651 52.381 0.00 0.00 41.55 3.02
1035 1052 1.434188 TGGCTCTTTGAGGGACTTCA 58.566 50.000 0.00 0.00 41.55 3.02
1036 1053 2.568623 TTGGCTCTTTGAGGGACTTC 57.431 50.000 0.00 0.00 41.55 3.01
1037 1054 3.532641 ATTTGGCTCTTTGAGGGACTT 57.467 42.857 0.00 0.00 41.55 3.01
1039 1056 5.921962 ATAAATTTGGCTCTTTGAGGGAC 57.078 39.130 0.00 0.00 0.00 4.46
1040 1057 6.969043 TCTATAAATTTGGCTCTTTGAGGGA 58.031 36.000 0.00 0.00 0.00 4.20
1041 1058 7.056635 TCTCTATAAATTTGGCTCTTTGAGGG 58.943 38.462 0.00 0.00 0.00 4.30
1042 1059 8.511604 TTCTCTATAAATTTGGCTCTTTGAGG 57.488 34.615 0.00 0.00 0.00 3.86
1069 1086 5.525378 CGCCTCTGCTAGTCTCATAATTTTT 59.475 40.000 0.00 0.00 34.43 1.94
1070 1087 5.053145 CGCCTCTGCTAGTCTCATAATTTT 58.947 41.667 0.00 0.00 34.43 1.82
1071 1088 4.100189 ACGCCTCTGCTAGTCTCATAATTT 59.900 41.667 0.00 0.00 34.43 1.82
1072 1089 3.639094 ACGCCTCTGCTAGTCTCATAATT 59.361 43.478 0.00 0.00 34.43 1.40
1073 1090 3.226777 ACGCCTCTGCTAGTCTCATAAT 58.773 45.455 0.00 0.00 34.43 1.28
1074 1091 2.619177 GACGCCTCTGCTAGTCTCATAA 59.381 50.000 0.00 0.00 34.43 1.90
1075 1092 2.222886 GACGCCTCTGCTAGTCTCATA 58.777 52.381 0.00 0.00 34.43 2.15
1076 1093 1.028905 GACGCCTCTGCTAGTCTCAT 58.971 55.000 0.00 0.00 34.43 2.90
1077 1094 1.032657 GGACGCCTCTGCTAGTCTCA 61.033 60.000 0.00 0.00 34.34 3.27
1078 1095 1.730451 GGGACGCCTCTGCTAGTCTC 61.730 65.000 0.00 0.00 34.34 3.36
1079 1096 1.755008 GGGACGCCTCTGCTAGTCT 60.755 63.158 0.00 0.00 34.34 3.24
1080 1097 1.755008 AGGGACGCCTCTGCTAGTC 60.755 63.158 0.00 0.00 34.43 2.59
1081 1098 2.055042 CAGGGACGCCTCTGCTAGT 61.055 63.158 0.00 0.00 34.43 2.57
1082 1099 1.323271 TTCAGGGACGCCTCTGCTAG 61.323 60.000 0.00 0.00 34.43 3.42
1083 1100 1.304962 TTCAGGGACGCCTCTGCTA 60.305 57.895 0.00 0.00 34.43 3.49
1084 1101 2.604686 TTCAGGGACGCCTCTGCT 60.605 61.111 0.00 0.00 34.43 4.24
1085 1102 2.435059 GTTCAGGGACGCCTCTGC 60.435 66.667 0.00 0.00 0.00 4.26
1086 1103 2.125912 CGTTCAGGGACGCCTCTG 60.126 66.667 0.00 0.00 36.12 3.35
1087 1104 3.382832 CCGTTCAGGGACGCCTCT 61.383 66.667 0.00 0.00 41.50 3.69
1096 1113 0.744281 ACAAACAAAGCCCGTTCAGG 59.256 50.000 0.00 0.00 40.63 3.86
1097 1114 2.192624 CAACAAACAAAGCCCGTTCAG 58.807 47.619 0.00 0.00 0.00 3.02
1098 1115 1.546476 ACAACAAACAAAGCCCGTTCA 59.454 42.857 0.00 0.00 0.00 3.18
1099 1116 2.190161 GACAACAAACAAAGCCCGTTC 58.810 47.619 0.00 0.00 0.00 3.95
1100 1117 1.468395 CGACAACAAACAAAGCCCGTT 60.468 47.619 0.00 0.00 0.00 4.44
1101 1118 0.099791 CGACAACAAACAAAGCCCGT 59.900 50.000 0.00 0.00 0.00 5.28
1102 1119 1.206115 GCGACAACAAACAAAGCCCG 61.206 55.000 0.00 0.00 0.00 6.13
1103 1120 0.102300 AGCGACAACAAACAAAGCCC 59.898 50.000 0.00 0.00 0.00 5.19
1104 1121 1.587946 CAAGCGACAACAAACAAAGCC 59.412 47.619 0.00 0.00 0.00 4.35
1105 1122 2.525055 TCAAGCGACAACAAACAAAGC 58.475 42.857 0.00 0.00 0.00 3.51
1106 1123 3.108144 CCTCAAGCGACAACAAACAAAG 58.892 45.455 0.00 0.00 0.00 2.77
1107 1124 2.733858 GCCTCAAGCGACAACAAACAAA 60.734 45.455 0.00 0.00 0.00 2.83
1108 1125 1.202245 GCCTCAAGCGACAACAAACAA 60.202 47.619 0.00 0.00 0.00 2.83
1109 1126 0.380378 GCCTCAAGCGACAACAAACA 59.620 50.000 0.00 0.00 0.00 2.83
1110 1127 0.317854 GGCCTCAAGCGACAACAAAC 60.318 55.000 0.00 0.00 45.17 2.93
1111 1128 1.452145 GGGCCTCAAGCGACAACAAA 61.452 55.000 0.84 0.00 45.17 2.83
1112 1129 1.896660 GGGCCTCAAGCGACAACAA 60.897 57.895 0.84 0.00 45.17 2.83
1113 1130 2.281484 GGGCCTCAAGCGACAACA 60.281 61.111 0.84 0.00 45.17 3.33
1114 1131 3.423154 CGGGCCTCAAGCGACAAC 61.423 66.667 0.84 0.00 45.17 3.32
1115 1132 3.621805 TCGGGCCTCAAGCGACAA 61.622 61.111 0.84 0.00 45.17 3.18
1116 1133 4.373116 GTCGGGCCTCAAGCGACA 62.373 66.667 21.78 0.00 45.17 4.35
1141 1158 3.721370 ATTCATGGACTGGGCCGGC 62.721 63.158 21.18 21.18 0.00 6.13
1142 1159 1.526917 GATTCATGGACTGGGCCGG 60.527 63.158 11.83 11.83 0.00 6.13
1151 1168 2.470983 TTGTGTGAGCGATTCATGGA 57.529 45.000 0.00 0.00 38.29 3.41
1155 1172 0.234625 GCGTTTGTGTGAGCGATTCA 59.765 50.000 0.00 0.00 0.00 2.57
1158 1175 2.325082 GGGCGTTTGTGTGAGCGAT 61.325 57.895 0.00 0.00 0.00 4.58
1179 1196 2.644992 CGAGCTTGGGTTTGTGCC 59.355 61.111 0.00 0.00 0.00 5.01
1194 1212 1.870055 GAGTGGGAGTAACGTGGCGA 61.870 60.000 0.00 0.00 0.00 5.54
1196 1214 1.079336 GGAGTGGGAGTAACGTGGC 60.079 63.158 0.00 0.00 0.00 5.01
1202 1220 2.656069 GGCGCTGGAGTGGGAGTAA 61.656 63.158 7.64 0.00 0.00 2.24
1295 1314 4.504916 CTGCTGGCTCCTCCGTCG 62.505 72.222 0.00 0.00 37.80 5.12
1522 1548 7.495934 ACGAAATCTTCCAGGTACATCATTTAG 59.504 37.037 0.00 0.00 0.00 1.85
1546 1574 1.067565 TGGAACAGAGCTCTAAGCACG 60.068 52.381 17.75 5.35 45.56 5.34
1565 1593 3.242413 CCAGAAATCAAACGCTACCGATG 60.242 47.826 0.00 0.00 38.29 3.84
1568 1596 2.343101 TCCAGAAATCAAACGCTACCG 58.657 47.619 0.00 0.00 41.14 4.02
1720 1799 8.826710 TGATACTCTCACAACAACTTTGTAAAG 58.173 33.333 2.94 2.94 41.31 1.85
1763 1856 7.843760 AGGTTGGGATGGACAAATTATTTGATA 59.156 33.333 22.53 9.49 43.26 2.15
1770 1863 4.666412 TCAGGTTGGGATGGACAAATTA 57.334 40.909 0.00 0.00 0.00 1.40
1776 1869 3.319122 GCATTATTCAGGTTGGGATGGAC 59.681 47.826 0.00 0.00 0.00 4.02
1837 1936 3.910627 ACAGAGACACAAAATAGGGTCCT 59.089 43.478 0.00 0.00 0.00 3.85
1841 1940 4.214119 CACACACAGAGACACAAAATAGGG 59.786 45.833 0.00 0.00 0.00 3.53
1843 1942 4.273235 TGCACACACAGAGACACAAAATAG 59.727 41.667 0.00 0.00 0.00 1.73
1974 2105 5.941555 AAACGAGAAGAGATGGGTTAGAT 57.058 39.130 0.00 0.00 0.00 1.98
2105 2250 8.831715 TTATTATCGCTAATCATGAGAAAGCA 57.168 30.769 20.36 11.63 36.92 3.91
2125 2270 8.792633 CAAAGTTCACCAGAAGACCATTTATTA 58.207 33.333 0.00 0.00 33.63 0.98
2165 2310 6.567602 AGAAATAACCCAGCTTCAGATAGT 57.432 37.500 0.00 0.00 0.00 2.12
2235 2381 3.937706 CTGTCCAAGGCAAAGATCACTAG 59.062 47.826 0.00 0.00 0.00 2.57
2336 2484 5.711976 CCTTCCTAATCACCAATGTCAAGTT 59.288 40.000 0.00 0.00 0.00 2.66
2393 2541 2.098443 ACCACGCACAACCTAAAGTTTG 59.902 45.455 0.00 0.00 36.18 2.93
2484 2632 2.643933 TCTCACTGCGATCTGTCTTG 57.356 50.000 0.00 0.00 0.00 3.02
2539 2687 4.819105 ACAGGGAAGATACGTCAATCAA 57.181 40.909 0.00 0.00 0.00 2.57
2540 2688 4.819105 AACAGGGAAGATACGTCAATCA 57.181 40.909 0.00 0.00 0.00 2.57
2541 2689 7.787725 ATTAAACAGGGAAGATACGTCAATC 57.212 36.000 0.00 0.00 0.00 2.67
2542 2690 7.827236 TCAATTAAACAGGGAAGATACGTCAAT 59.173 33.333 0.00 0.00 0.00 2.57
2552 2700 8.040132 TGCCAATTAATCAATTAAACAGGGAAG 58.960 33.333 0.00 0.00 36.02 3.46
2556 2704 9.603921 ATTCTGCCAATTAATCAATTAAACAGG 57.396 29.630 0.00 3.96 36.02 4.00
2575 2723 3.703420 GCAGACATCAAATGATTCTGCC 58.297 45.455 27.76 18.94 45.99 4.85
2761 2909 0.872388 CCCTTTCACGCAACACCTAC 59.128 55.000 0.00 0.00 0.00 3.18
2899 3047 2.493035 CATTGCTACGATATGCCACCA 58.507 47.619 0.00 0.00 0.00 4.17
2958 3107 3.744940 TTTAGGAACGGAGGGAGTAGA 57.255 47.619 0.00 0.00 0.00 2.59
2959 3108 5.539193 ACATATTTAGGAACGGAGGGAGTAG 59.461 44.000 0.00 0.00 0.00 2.57
2964 3113 4.957684 AGACATATTTAGGAACGGAGGG 57.042 45.455 0.00 0.00 0.00 4.30
3049 3200 8.546322 TGGACTACATACGGATGTATATAGACT 58.454 37.037 20.64 0.00 45.42 3.24
3097 3248 8.912614 ATTACTCCCTCCGTTCCTAAATATAT 57.087 34.615 0.00 0.00 0.00 0.86
3196 4641 8.964476 AGAAAAACTAACTGAAACATCTCTCA 57.036 30.769 0.00 0.00 0.00 3.27
3303 4748 7.586300 AGAAACATGTTAAACTGAAATTCGACG 59.414 33.333 12.39 0.00 0.00 5.12
3340 4785 7.318141 CAAGCTTATCCATGTTGAACTGATTT 58.682 34.615 0.00 0.00 0.00 2.17
3341 4786 6.626623 GCAAGCTTATCCATGTTGAACTGATT 60.627 38.462 0.00 0.00 0.00 2.57
3342 4787 5.163581 GCAAGCTTATCCATGTTGAACTGAT 60.164 40.000 0.00 0.00 0.00 2.90
3349 4794 4.445452 AAGTGCAAGCTTATCCATGTTG 57.555 40.909 0.00 0.00 0.00 3.33
3433 4879 0.107410 ACAGGCAAGGTTTCGTCACA 60.107 50.000 0.00 0.00 0.00 3.58
3462 4908 7.847078 CACAATCAACATGTTGTTTGAATCAAC 59.153 33.333 41.68 11.19 45.77 3.18
3463 4909 7.465647 GCACAATCAACATGTTGTTTGAATCAA 60.466 33.333 41.68 23.62 45.77 2.57
3464 4910 6.018913 GCACAATCAACATGTTGTTTGAATCA 60.019 34.615 41.68 24.18 45.77 2.57
3479 4934 4.034279 AGCAAACAAATGTGCACAATCAAC 59.966 37.500 25.72 8.81 43.42 3.18
3612 5068 4.929211 GGTGAAGCATTTGGGTTAAATCAC 59.071 41.667 0.00 0.00 36.87 3.06
3665 5125 3.531538 TGGTAAATGTCATCGGAGAAGC 58.468 45.455 0.00 0.00 43.58 3.86
3671 5131 6.147821 GGTCAGAATATGGTAAATGTCATCGG 59.852 42.308 0.00 0.00 0.00 4.18
3675 5135 5.104693 ACCGGTCAGAATATGGTAAATGTCA 60.105 40.000 0.00 0.00 0.00 3.58
3678 5138 9.098355 CATATACCGGTCAGAATATGGTAAATG 57.902 37.037 20.54 3.62 38.57 2.32
3880 5348 0.179111 CTCGCCCAAGTTCATCGCTA 60.179 55.000 0.00 0.00 0.00 4.26
3976 5446 2.871133 CATGTGCATGCGACAAAGAAT 58.129 42.857 21.29 7.10 31.39 2.40
4019 5491 4.501071 GCATGAATTCCTCTGCACAAATT 58.499 39.130 15.78 0.00 34.77 1.82
4149 5719 7.767198 CGGTAAAGGTGAATTTATCTGGAGTTA 59.233 37.037 0.00 0.00 0.00 2.24
4188 5759 0.976641 CTGTGGCCACTACAAGAGGA 59.023 55.000 34.75 11.86 0.00 3.71
4507 7337 7.624077 AGTCAGGAACCAGGTAGAATTATAAGT 59.376 37.037 0.00 0.00 0.00 2.24
4547 7377 5.729510 AGAAACATCTAGGAGAACAGAAGC 58.270 41.667 0.00 0.00 0.00 3.86
4562 7395 7.307493 TCATAGCATGTGTACAAGAAACATC 57.693 36.000 0.00 0.00 32.27 3.06
4572 7405 8.830580 AGTATTGTGATTTCATAGCATGTGTAC 58.169 33.333 0.00 0.00 0.00 2.90
4650 7580 7.335924 GTGAACCTTGTATGCTTAAATCTGGTA 59.664 37.037 0.00 0.00 0.00 3.25
4685 7615 6.148976 GGGTTGTTCCTCTTGAATAGTACAAC 59.851 42.308 12.97 12.97 35.67 3.32
4802 7736 5.943416 TGTTCAAGTCCAACCGATCATAAAT 59.057 36.000 0.00 0.00 0.00 1.40
4803 7737 5.309638 TGTTCAAGTCCAACCGATCATAAA 58.690 37.500 0.00 0.00 0.00 1.40
4804 7738 4.900684 TGTTCAAGTCCAACCGATCATAA 58.099 39.130 0.00 0.00 0.00 1.90
4805 7739 4.545208 TGTTCAAGTCCAACCGATCATA 57.455 40.909 0.00 0.00 0.00 2.15
4806 7740 3.417069 TGTTCAAGTCCAACCGATCAT 57.583 42.857 0.00 0.00 0.00 2.45
4807 7741 2.920724 TGTTCAAGTCCAACCGATCA 57.079 45.000 0.00 0.00 0.00 2.92
4808 7742 3.609409 GCTTTGTTCAAGTCCAACCGATC 60.609 47.826 0.00 0.00 34.56 3.69
4809 7743 2.293399 GCTTTGTTCAAGTCCAACCGAT 59.707 45.455 0.00 0.00 34.56 4.18
4820 7754 3.925913 GCAGAAACACAAGCTTTGTTCAA 59.074 39.130 20.06 0.00 43.23 2.69
4823 7757 3.874392 AGCAGAAACACAAGCTTTGTT 57.126 38.095 16.38 16.38 43.23 2.83
4890 7824 3.409026 TTTGAAGGGAAGCAGTCTCTC 57.591 47.619 0.00 0.00 35.26 3.20
4896 7831 6.279882 TGTTTGTTTATTTGAAGGGAAGCAG 58.720 36.000 0.00 0.00 0.00 4.24
4899 7834 6.515832 AGCTGTTTGTTTATTTGAAGGGAAG 58.484 36.000 0.00 0.00 0.00 3.46
4944 7879 9.566432 AAGGTGAATGAGACCAAATTATATCTC 57.434 33.333 0.00 6.03 38.46 2.75
4945 7880 9.927081 AAAGGTGAATGAGACCAAATTATATCT 57.073 29.630 0.00 0.00 35.76 1.98
4951 7886 8.470002 GCTATAAAAGGTGAATGAGACCAAATT 58.530 33.333 0.00 0.00 35.76 1.82
4952 7887 7.068716 GGCTATAAAAGGTGAATGAGACCAAAT 59.931 37.037 0.00 0.00 35.76 2.32
4953 7888 6.377146 GGCTATAAAAGGTGAATGAGACCAAA 59.623 38.462 0.00 0.00 35.76 3.28
4954 7889 5.885912 GGCTATAAAAGGTGAATGAGACCAA 59.114 40.000 0.00 0.00 35.76 3.67
4955 7890 5.045213 TGGCTATAAAAGGTGAATGAGACCA 60.045 40.000 0.00 0.00 35.76 4.02
4956 7891 5.437060 TGGCTATAAAAGGTGAATGAGACC 58.563 41.667 0.00 0.00 0.00 3.85
4957 7892 7.420800 CAATGGCTATAAAAGGTGAATGAGAC 58.579 38.462 0.00 0.00 0.00 3.36
4958 7893 6.547141 CCAATGGCTATAAAAGGTGAATGAGA 59.453 38.462 0.00 0.00 0.00 3.27
4959 7894 6.547141 TCCAATGGCTATAAAAGGTGAATGAG 59.453 38.462 0.00 0.00 0.00 2.90
4960 7895 6.430864 TCCAATGGCTATAAAAGGTGAATGA 58.569 36.000 0.00 0.00 0.00 2.57
4961 7896 6.713762 TCCAATGGCTATAAAAGGTGAATG 57.286 37.500 0.00 0.00 0.00 2.67
4962 7897 6.840705 ACATCCAATGGCTATAAAAGGTGAAT 59.159 34.615 0.00 0.00 33.60 2.57
4963 7898 6.096705 CACATCCAATGGCTATAAAAGGTGAA 59.903 38.462 0.00 0.00 33.60 3.18
4964 7899 5.593909 CACATCCAATGGCTATAAAAGGTGA 59.406 40.000 0.00 0.00 33.60 4.02
4965 7900 5.593909 TCACATCCAATGGCTATAAAAGGTG 59.406 40.000 0.00 0.00 33.60 4.00
4966 7901 5.765510 TCACATCCAATGGCTATAAAAGGT 58.234 37.500 0.00 0.00 33.60 3.50
4967 7902 6.684686 CATCACATCCAATGGCTATAAAAGG 58.315 40.000 0.00 0.00 33.60 3.11
4968 7903 6.015688 AGCATCACATCCAATGGCTATAAAAG 60.016 38.462 0.00 0.00 33.60 2.27
4969 7904 5.834742 AGCATCACATCCAATGGCTATAAAA 59.165 36.000 0.00 0.00 33.60 1.52
4970 7905 5.387788 AGCATCACATCCAATGGCTATAAA 58.612 37.500 0.00 0.00 33.60 1.40
4971 7906 4.989277 AGCATCACATCCAATGGCTATAA 58.011 39.130 0.00 0.00 33.60 0.98
4972 7907 4.645863 AGCATCACATCCAATGGCTATA 57.354 40.909 0.00 0.00 33.60 1.31
4973 7908 3.520691 AGCATCACATCCAATGGCTAT 57.479 42.857 0.00 0.00 33.60 2.97
4974 7909 4.645863 ATAGCATCACATCCAATGGCTA 57.354 40.909 0.00 0.00 33.60 3.93
4975 7910 3.520691 ATAGCATCACATCCAATGGCT 57.479 42.857 0.00 0.00 33.60 4.75
4976 7911 5.005740 TCTTATAGCATCACATCCAATGGC 58.994 41.667 0.00 0.00 33.60 4.40
4977 7912 6.657966 ACATCTTATAGCATCACATCCAATGG 59.342 38.462 0.00 0.00 33.60 3.16
4978 7913 7.174426 ACACATCTTATAGCATCACATCCAATG 59.826 37.037 0.00 0.00 0.00 2.82
4979 7914 7.174426 CACACATCTTATAGCATCACATCCAAT 59.826 37.037 0.00 0.00 0.00 3.16
4980 7915 6.484308 CACACATCTTATAGCATCACATCCAA 59.516 38.462 0.00 0.00 0.00 3.53
4981 7916 5.993441 CACACATCTTATAGCATCACATCCA 59.007 40.000 0.00 0.00 0.00 3.41
4982 7917 5.994054 ACACACATCTTATAGCATCACATCC 59.006 40.000 0.00 0.00 0.00 3.51
4983 7918 6.481313 ACACACACATCTTATAGCATCACATC 59.519 38.462 0.00 0.00 0.00 3.06
4984 7919 6.259387 CACACACACATCTTATAGCATCACAT 59.741 38.462 0.00 0.00 0.00 3.21
4985 7920 5.581874 CACACACACATCTTATAGCATCACA 59.418 40.000 0.00 0.00 0.00 3.58
4986 7921 5.503031 GCACACACACATCTTATAGCATCAC 60.503 44.000 0.00 0.00 0.00 3.06
4987 7922 4.571984 GCACACACACATCTTATAGCATCA 59.428 41.667 0.00 0.00 0.00 3.07
4988 7923 4.813161 AGCACACACACATCTTATAGCATC 59.187 41.667 0.00 0.00 0.00 3.91
4989 7924 4.573607 CAGCACACACACATCTTATAGCAT 59.426 41.667 0.00 0.00 0.00 3.79
4990 7925 3.934579 CAGCACACACACATCTTATAGCA 59.065 43.478 0.00 0.00 0.00 3.49
4991 7926 4.033358 GTCAGCACACACACATCTTATAGC 59.967 45.833 0.00 0.00 0.00 2.97
4992 7927 4.266265 CGTCAGCACACACACATCTTATAG 59.734 45.833 0.00 0.00 0.00 1.31
4993 7928 4.173256 CGTCAGCACACACACATCTTATA 58.827 43.478 0.00 0.00 0.00 0.98
4994 7929 2.995939 CGTCAGCACACACACATCTTAT 59.004 45.455 0.00 0.00 0.00 1.73
4995 7930 2.223947 ACGTCAGCACACACACATCTTA 60.224 45.455 0.00 0.00 0.00 2.10
4996 7931 1.220529 CGTCAGCACACACACATCTT 58.779 50.000 0.00 0.00 0.00 2.40
4997 7932 0.104855 ACGTCAGCACACACACATCT 59.895 50.000 0.00 0.00 0.00 2.90
4998 7933 0.233074 CACGTCAGCACACACACATC 59.767 55.000 0.00 0.00 0.00 3.06
4999 7934 1.159713 CCACGTCAGCACACACACAT 61.160 55.000 0.00 0.00 0.00 3.21
5000 7935 1.813337 CCACGTCAGCACACACACA 60.813 57.895 0.00 0.00 0.00 3.72
5001 7936 0.880278 ATCCACGTCAGCACACACAC 60.880 55.000 0.00 0.00 0.00 3.82
5002 7937 0.179059 AATCCACGTCAGCACACACA 60.179 50.000 0.00 0.00 0.00 3.72
5003 7938 0.235665 CAATCCACGTCAGCACACAC 59.764 55.000 0.00 0.00 0.00 3.82
5004 7939 0.179059 ACAATCCACGTCAGCACACA 60.179 50.000 0.00 0.00 0.00 3.72
5005 7940 1.790755 TACAATCCACGTCAGCACAC 58.209 50.000 0.00 0.00 0.00 3.82
5006 7941 2.760634 ATACAATCCACGTCAGCACA 57.239 45.000 0.00 0.00 0.00 4.57
5007 7942 4.119862 ACATATACAATCCACGTCAGCAC 58.880 43.478 0.00 0.00 0.00 4.40
5008 7943 4.400529 ACATATACAATCCACGTCAGCA 57.599 40.909 0.00 0.00 0.00 4.41
5009 7944 5.050490 AGAACATATACAATCCACGTCAGC 58.950 41.667 0.00 0.00 0.00 4.26
5010 7945 6.535150 ACAAGAACATATACAATCCACGTCAG 59.465 38.462 0.00 0.00 0.00 3.51
5011 7946 6.403049 ACAAGAACATATACAATCCACGTCA 58.597 36.000 0.00 0.00 0.00 4.35
5012 7947 6.903883 ACAAGAACATATACAATCCACGTC 57.096 37.500 0.00 0.00 0.00 4.34
5013 7948 7.681939 AAACAAGAACATATACAATCCACGT 57.318 32.000 0.00 0.00 0.00 4.49
5014 7949 8.233868 TGAAAACAAGAACATATACAATCCACG 58.766 33.333 0.00 0.00 0.00 4.94
5015 7950 9.906660 TTGAAAACAAGAACATATACAATCCAC 57.093 29.630 0.00 0.00 0.00 4.02
5025 7960 9.734620 CTCATTCACTTTGAAAACAAGAACATA 57.265 29.630 0.00 0.00 40.12 2.29
5026 7961 8.469200 TCTCATTCACTTTGAAAACAAGAACAT 58.531 29.630 0.00 0.00 40.12 2.71
5027 7962 7.754924 GTCTCATTCACTTTGAAAACAAGAACA 59.245 33.333 0.00 0.00 40.12 3.18
5028 7963 7.220875 GGTCTCATTCACTTTGAAAACAAGAAC 59.779 37.037 0.00 0.00 40.12 3.01
5029 7964 7.093988 TGGTCTCATTCACTTTGAAAACAAGAA 60.094 33.333 0.00 0.00 40.12 2.52
5030 7965 6.376864 TGGTCTCATTCACTTTGAAAACAAGA 59.623 34.615 0.00 0.00 40.12 3.02
5031 7966 6.563422 TGGTCTCATTCACTTTGAAAACAAG 58.437 36.000 0.00 0.00 40.12 3.16
5032 7967 6.522625 TGGTCTCATTCACTTTGAAAACAA 57.477 33.333 0.00 0.00 40.12 2.83
5033 7968 6.522625 TTGGTCTCATTCACTTTGAAAACA 57.477 33.333 0.00 0.00 40.12 2.83
5034 7969 8.424274 AATTTGGTCTCATTCACTTTGAAAAC 57.576 30.769 0.00 0.00 40.12 2.43
5070 8005 5.988865 TGGGAGTACCTAGAACTCATCTA 57.011 43.478 20.28 5.84 44.25 1.98
5071 8006 4.883021 TGGGAGTACCTAGAACTCATCT 57.117 45.455 20.28 0.00 44.25 2.90
5072 8007 7.069578 TGTTTATGGGAGTACCTAGAACTCATC 59.930 40.741 20.28 14.32 44.25 2.92
5073 8008 6.901300 TGTTTATGGGAGTACCTAGAACTCAT 59.099 38.462 20.28 12.63 44.25 2.90
5074 8009 6.258354 TGTTTATGGGAGTACCTAGAACTCA 58.742 40.000 20.28 7.79 44.25 3.41
5075 8010 6.786967 TGTTTATGGGAGTACCTAGAACTC 57.213 41.667 13.84 13.84 42.19 3.01
5076 8011 7.563724 TTTGTTTATGGGAGTACCTAGAACT 57.436 36.000 0.00 0.00 41.11 3.01
5077 8012 7.498239 GGATTTGTTTATGGGAGTACCTAGAAC 59.502 40.741 0.00 0.00 41.11 3.01
5078 8013 7.404980 AGGATTTGTTTATGGGAGTACCTAGAA 59.595 37.037 0.00 0.00 41.11 2.10
5079 8014 6.906901 AGGATTTGTTTATGGGAGTACCTAGA 59.093 38.462 0.00 0.00 41.11 2.43
5080 8015 7.138054 AGGATTTGTTTATGGGAGTACCTAG 57.862 40.000 0.00 0.00 41.11 3.02
5081 8016 7.519347 AAGGATTTGTTTATGGGAGTACCTA 57.481 36.000 0.00 0.00 41.11 3.08
5082 8017 6.402981 AAGGATTTGTTTATGGGAGTACCT 57.597 37.500 0.00 0.00 41.11 3.08
5083 8018 6.661805 TGAAAGGATTTGTTTATGGGAGTACC 59.338 38.462 0.00 0.00 39.27 3.34
5084 8019 7.696992 TGAAAGGATTTGTTTATGGGAGTAC 57.303 36.000 0.00 0.00 39.27 2.73
5085 8020 7.093945 GCTTGAAAGGATTTGTTTATGGGAGTA 60.094 37.037 0.00 0.00 39.27 2.59
5086 8021 6.295292 GCTTGAAAGGATTTGTTTATGGGAGT 60.295 38.462 0.00 0.00 39.27 3.85
5087 8022 6.101997 GCTTGAAAGGATTTGTTTATGGGAG 58.898 40.000 0.00 0.00 39.27 4.30
5088 8023 5.336372 CGCTTGAAAGGATTTGTTTATGGGA 60.336 40.000 0.00 0.00 39.27 4.37
5089 8024 4.864247 CGCTTGAAAGGATTTGTTTATGGG 59.136 41.667 0.00 0.00 39.27 4.00
5090 8025 5.469479 ACGCTTGAAAGGATTTGTTTATGG 58.531 37.500 0.00 0.00 39.27 2.74
5093 8028 7.708998 ACTTTACGCTTGAAAGGATTTGTTTA 58.291 30.769 6.75 0.00 39.27 2.01
5097 8032 6.438763 AGAACTTTACGCTTGAAAGGATTTG 58.561 36.000 6.75 0.00 39.27 2.32
5101 8036 4.879545 ACAAGAACTTTACGCTTGAAAGGA 59.120 37.500 0.00 0.00 41.03 3.36
5102 8037 4.970003 CACAAGAACTTTACGCTTGAAAGG 59.030 41.667 0.00 0.00 41.03 3.11
5104 8039 4.636648 TCCACAAGAACTTTACGCTTGAAA 59.363 37.500 0.00 0.00 41.03 2.69
5108 8043 4.385825 TCATCCACAAGAACTTTACGCTT 58.614 39.130 0.00 0.00 0.00 4.68
5111 8046 6.898041 TGAAATCATCCACAAGAACTTTACG 58.102 36.000 0.00 0.00 0.00 3.18
5112 8047 8.514594 TCATGAAATCATCCACAAGAACTTTAC 58.485 33.333 0.00 0.00 33.61 2.01
5190 8125 4.989279 ACCAACAAGGACATGATAATGC 57.011 40.909 0.00 0.00 41.22 3.56
5211 8146 0.250467 GGAGTTGGCTGAGAGCACAA 60.250 55.000 0.00 0.00 44.75 3.33
5218 8153 0.879765 CTTTGCAGGAGTTGGCTGAG 59.120 55.000 0.00 0.00 0.00 3.35
5274 8964 7.268586 ACTGGAGTACATTAGCTTCATGTTAG 58.731 38.462 14.56 9.30 36.28 2.34
5298 8988 4.525912 AAATGATCTTCAGGCAACCAAC 57.474 40.909 0.00 0.00 37.17 3.77
5299 8989 4.706476 CCTAAATGATCTTCAGGCAACCAA 59.294 41.667 0.00 0.00 37.17 3.67
5300 8990 4.263905 ACCTAAATGATCTTCAGGCAACCA 60.264 41.667 8.40 0.00 37.17 3.67
5301 8991 4.273318 ACCTAAATGATCTTCAGGCAACC 58.727 43.478 8.40 0.00 37.17 3.77
5302 8992 5.904362 AACCTAAATGATCTTCAGGCAAC 57.096 39.130 8.40 0.00 0.00 4.17
5305 8999 6.333416 GGAAAAACCTAAATGATCTTCAGGC 58.667 40.000 8.40 0.00 35.41 4.85
5341 9035 5.059833 GGAAATATTCAGCTCGTGGAGATT 58.940 41.667 0.00 0.00 0.00 2.40
5366 9060 1.725641 TGCAAGGCTGATTCACTACG 58.274 50.000 0.00 0.00 0.00 3.51
5486 9180 2.702748 ACTCCCCTAATAAATCGGCCT 58.297 47.619 0.00 0.00 0.00 5.19
5487 9181 3.619242 GCTACTCCCCTAATAAATCGGCC 60.619 52.174 0.00 0.00 0.00 6.13
5494 9188 3.573110 GCTTCGAGCTACTCCCCTAATAA 59.427 47.826 0.00 0.00 38.45 1.40
5512 9206 6.348868 CCTTCTCCACTTGATAAAACTGCTTC 60.349 42.308 0.00 0.00 0.00 3.86
5513 9207 5.474876 CCTTCTCCACTTGATAAAACTGCTT 59.525 40.000 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.