Multiple sequence alignment - TraesCS6B01G094500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G094500 chr6B 100.000 5857 0 0 1 5857 71033513 71039369 0.000000e+00 10816
1 TraesCS6B01G094500 chr6A 93.016 4410 183 53 816 5173 38466489 38470825 0.000000e+00 6322
2 TraesCS6B01G094500 chr6A 86.029 408 36 8 1 395 38466087 38466486 9.080000e-113 418
3 TraesCS6B01G094500 chr6A 90.361 249 21 2 5372 5620 38471468 38471713 2.040000e-84 324
4 TraesCS6B01G094500 chr6A 82.677 127 15 5 5635 5755 38471696 38471821 8.030000e-19 106
5 TraesCS6B01G094500 chr6D 91.408 3026 141 53 2521 5480 34339948 34342920 0.000000e+00 4037
6 TraesCS6B01G094500 chr6D 89.864 1105 82 14 1471 2551 34338850 34339948 0.000000e+00 1393
7 TraesCS6B01G094500 chr6D 97.471 514 10 1 823 1336 34338283 34338793 0.000000e+00 874
8 TraesCS6B01G094500 chr6D 91.582 392 27 5 425 814 52866385 52865998 2.400000e-148 536
9 TraesCS6B01G094500 chr3D 91.473 387 28 4 425 808 565403750 565404134 1.450000e-145 527
10 TraesCS6B01G094500 chr3D 89.896 386 34 5 424 808 324044801 324044420 5.270000e-135 492
11 TraesCS6B01G094500 chr1D 91.192 386 29 4 425 808 26599557 26599175 2.420000e-143 520
12 TraesCS6B01G094500 chr5A 90.155 386 32 5 425 808 451393924 451393543 1.130000e-136 497
13 TraesCS6B01G094500 chr5A 87.665 227 19 2 173 390 345241143 345241369 7.530000e-64 255
14 TraesCS6B01G094500 chr7D 90.617 373 29 6 430 800 161931592 161931224 1.900000e-134 490
15 TraesCS6B01G094500 chr2D 89.664 387 34 5 425 809 524581623 524582005 6.820000e-134 488
16 TraesCS6B01G094500 chr2D 89.610 385 34 4 425 808 124762748 124763127 8.820000e-133 484
17 TraesCS6B01G094500 chr2D 84.716 229 25 6 176 395 649604188 649604415 2.750000e-53 220
18 TraesCS6B01G094500 chr2B 89.313 393 36 5 424 813 41410955 41410566 6.820000e-134 488
19 TraesCS6B01G094500 chr2B 88.554 166 18 1 176 340 152858843 152859008 3.580000e-47 200
20 TraesCS6B01G094500 chr7B 86.344 227 22 2 173 390 348972056 348972282 7.590000e-59 239
21 TraesCS6B01G094500 chr5B 86.099 223 23 2 176 390 293952274 293952052 3.530000e-57 233
22 TraesCS6B01G094500 chrUn 85.714 224 23 2 176 390 126903439 126903216 1.640000e-55 228
23 TraesCS6B01G094500 chr7A 88.235 170 18 2 172 340 670949085 670948917 9.950000e-48 202
24 TraesCS6B01G094500 chr2A 89.091 165 13 3 175 338 683634345 683634505 3.580000e-47 200


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G094500 chr6B 71033513 71039369 5856 False 10816.000000 10816 100.000000 1 5857 1 chr6B.!!$F1 5856
1 TraesCS6B01G094500 chr6A 38466087 38471821 5734 False 1792.500000 6322 88.020750 1 5755 4 chr6A.!!$F1 5754
2 TraesCS6B01G094500 chr6D 34338283 34342920 4637 False 2101.333333 4037 92.914333 823 5480 3 chr6D.!!$F1 4657

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
497 511 0.250793 TGTACAACATACCTGCGGGG 59.749 55.0 18.0 5.11 41.89 5.73 F
598 612 0.394938 TAGTGTGAGCTTTTGGGCGA 59.605 50.0 0.0 0.00 37.29 5.54 F
1766 1786 0.107831 TCCTGGTTCCAAGTTCCACG 59.892 55.0 0.0 0.00 0.00 4.94 F
2648 2742 0.514255 CTGCACCTGTGTCGTGATTG 59.486 55.0 0.0 0.00 32.77 2.67 F
2826 2920 0.252197 AACGTCATGGGGCTACTTCC 59.748 55.0 0.0 0.00 0.00 3.46 F
4302 4420 0.890683 CCTGGGCTGTTTCAATGGTC 59.109 55.0 0.0 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1342 1357 0.981183 AGGCCGAAATGTAGGTGACA 59.019 50.0 0.00 0.0 43.97 3.58 R
1936 1966 1.616159 CCCCTCAAATTGTTCACCGT 58.384 50.0 0.00 0.0 0.00 4.83 R
2728 2822 0.108945 GCAAATCCAAGAGCCTGCAC 60.109 55.0 0.00 0.0 0.00 4.57 R
4273 4391 0.770557 ACAGCCCAGGAACAACCCTA 60.771 55.0 0.00 0.0 40.05 3.53 R
4652 4770 0.250338 GAAGCTTCCCGGTCAACAGT 60.250 55.0 15.97 0.0 0.00 3.55 R
5580 6149 0.036164 AACCATGCTACCAACGCTGA 59.964 50.0 0.00 0.0 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.827399 AAGTAGGGCCCACACGTCAG 61.827 60.000 27.56 0.00 0.00 3.51
29 30 2.203728 TAGGGCCCACACGTCAGT 60.204 61.111 27.56 1.16 0.00 3.41
32 33 3.986006 GGCCCACACGTCAGTCGA 61.986 66.667 0.00 0.00 42.86 4.20
53 54 1.675641 ACCAACCATGCCTCGCTTC 60.676 57.895 0.00 0.00 0.00 3.86
66 67 2.135933 CTCGCTTCAGGTCTTCGTTTT 58.864 47.619 0.00 0.00 0.00 2.43
87 93 2.080286 TTAGCGGTGCTTCAAGTCTC 57.920 50.000 0.00 0.00 40.44 3.36
88 94 1.257743 TAGCGGTGCTTCAAGTCTCT 58.742 50.000 0.00 0.00 40.44 3.10
108 114 3.639561 TCTGTGGGCTATAGCAAATACGA 59.360 43.478 25.53 11.47 44.36 3.43
123 129 0.397957 TACGATGGCTAGGGCTTGGA 60.398 55.000 0.00 0.00 38.73 3.53
153 159 4.109320 ACCCAGCCTAAACCATAGTAAGT 58.891 43.478 0.00 0.00 0.00 2.24
154 160 4.538891 ACCCAGCCTAAACCATAGTAAGTT 59.461 41.667 0.00 0.00 0.00 2.66
158 164 7.362660 CCCAGCCTAAACCATAGTAAGTTTTTC 60.363 40.741 6.91 0.00 37.39 2.29
166 172 9.529325 AAACCATAGTAAGTTTTTCTTTTGAGC 57.471 29.630 0.00 0.00 37.56 4.26
179 185 7.948278 TTTCTTTTGAGCAGAACTACTACTC 57.052 36.000 0.00 0.00 38.96 2.59
182 188 2.736347 TGAGCAGAACTACTACTCCCC 58.264 52.381 0.00 0.00 38.02 4.81
183 189 2.033372 GAGCAGAACTACTACTCCCCC 58.967 57.143 0.00 0.00 34.01 5.40
187 193 3.200165 GCAGAACTACTACTCCCCCATTT 59.800 47.826 0.00 0.00 0.00 2.32
204 210 3.565482 CCATTTCATAATGTAGTGCGCCT 59.435 43.478 4.18 3.99 39.62 5.52
208 214 7.413000 CCATTTCATAATGTAGTGCGCCTATAC 60.413 40.741 4.18 5.85 39.62 1.47
220 226 4.049186 TGCGCCTATACTTTTCGAGATTC 58.951 43.478 4.18 0.00 0.00 2.52
229 235 9.959775 CTATACTTTTCGAGATTCAACTTTGAC 57.040 33.333 0.00 0.00 36.83 3.18
230 236 6.061231 ACTTTTCGAGATTCAACTTTGACC 57.939 37.500 0.00 0.00 36.83 4.02
237 243 7.974675 TCGAGATTCAACTTTGACCATAAATC 58.025 34.615 0.00 0.00 36.83 2.17
322 328 6.910536 ACGAATTCAAAGGTATCTGTCATC 57.089 37.500 6.22 0.00 0.00 2.92
325 331 6.201806 CGAATTCAAAGGTATCTGTCATCCTC 59.798 42.308 6.22 0.00 0.00 3.71
330 336 1.333177 GTATCTGTCATCCTCCCGCT 58.667 55.000 0.00 0.00 0.00 5.52
378 392 7.420184 AAAAATAAATCTCCAAAAGCGTTGG 57.580 32.000 14.25 14.25 40.87 3.77
379 393 5.722021 AATAAATCTCCAAAAGCGTTGGT 57.278 34.783 18.32 5.22 40.40 3.67
390 404 3.658757 AAGCGTTGGTGCATTACATTT 57.341 38.095 0.00 0.00 37.31 2.32
391 405 2.945278 AGCGTTGGTGCATTACATTTG 58.055 42.857 0.00 0.00 37.31 2.32
392 406 2.295909 AGCGTTGGTGCATTACATTTGT 59.704 40.909 0.00 0.00 37.31 2.83
394 408 2.985809 CGTTGGTGCATTACATTTGTGG 59.014 45.455 0.00 0.00 0.00 4.17
395 409 3.324993 GTTGGTGCATTACATTTGTGGG 58.675 45.455 0.00 0.00 0.00 4.61
396 410 2.881734 TGGTGCATTACATTTGTGGGA 58.118 42.857 0.00 0.00 0.00 4.37
397 411 2.824936 TGGTGCATTACATTTGTGGGAG 59.175 45.455 0.00 0.00 0.00 4.30
398 412 2.825532 GGTGCATTACATTTGTGGGAGT 59.174 45.455 0.00 0.00 0.00 3.85
399 413 3.367292 GGTGCATTACATTTGTGGGAGTG 60.367 47.826 0.00 0.00 0.00 3.51
400 414 2.824936 TGCATTACATTTGTGGGAGTGG 59.175 45.455 0.00 0.00 0.00 4.00
401 415 2.166254 GCATTACATTTGTGGGAGTGGG 59.834 50.000 0.00 0.00 0.00 4.61
402 416 2.595750 TTACATTTGTGGGAGTGGGG 57.404 50.000 0.00 0.00 0.00 4.96
403 417 0.701731 TACATTTGTGGGAGTGGGGG 59.298 55.000 0.00 0.00 0.00 5.40
404 418 1.368268 ACATTTGTGGGAGTGGGGGT 61.368 55.000 0.00 0.00 0.00 4.95
405 419 0.899717 CATTTGTGGGAGTGGGGGTG 60.900 60.000 0.00 0.00 0.00 4.61
406 420 2.092904 ATTTGTGGGAGTGGGGGTGG 62.093 60.000 0.00 0.00 0.00 4.61
431 445 4.949966 GGGGGAGACTAGTATAGGATCA 57.050 50.000 0.00 0.00 44.97 2.92
432 446 5.272405 GGGGGAGACTAGTATAGGATCAA 57.728 47.826 0.00 0.00 44.97 2.57
433 447 5.018149 GGGGGAGACTAGTATAGGATCAAC 58.982 50.000 0.00 0.00 44.97 3.18
434 448 5.018149 GGGGAGACTAGTATAGGATCAACC 58.982 50.000 0.00 0.00 44.97 3.77
435 449 5.018149 GGGAGACTAGTATAGGATCAACCC 58.982 50.000 0.00 0.00 44.97 4.11
436 450 5.459241 GGGAGACTAGTATAGGATCAACCCA 60.459 48.000 0.00 0.00 44.97 4.51
437 451 6.075984 GGAGACTAGTATAGGATCAACCCAA 58.924 44.000 0.00 0.00 44.97 4.12
438 452 6.553852 GGAGACTAGTATAGGATCAACCCAAA 59.446 42.308 0.00 0.00 44.97 3.28
439 453 7.362802 AGACTAGTATAGGATCAACCCAAAC 57.637 40.000 0.00 0.00 44.97 2.93
440 454 6.901300 AGACTAGTATAGGATCAACCCAAACA 59.099 38.462 0.00 0.00 44.97 2.83
441 455 7.569111 AGACTAGTATAGGATCAACCCAAACAT 59.431 37.037 0.00 0.00 44.97 2.71
442 456 8.102484 ACTAGTATAGGATCAACCCAAACATT 57.898 34.615 0.00 0.00 44.97 2.71
443 457 8.557450 ACTAGTATAGGATCAACCCAAACATTT 58.443 33.333 0.00 0.00 44.97 2.32
444 458 7.881775 AGTATAGGATCAACCCAAACATTTC 57.118 36.000 0.00 0.00 40.05 2.17
445 459 7.410174 AGTATAGGATCAACCCAAACATTTCA 58.590 34.615 0.00 0.00 40.05 2.69
446 460 8.061304 AGTATAGGATCAACCCAAACATTTCAT 58.939 33.333 0.00 0.00 40.05 2.57
447 461 9.349713 GTATAGGATCAACCCAAACATTTCATA 57.650 33.333 0.00 0.00 40.05 2.15
449 463 7.738437 AGGATCAACCCAAACATTTCATATT 57.262 32.000 0.00 0.00 40.05 1.28
450 464 8.149631 AGGATCAACCCAAACATTTCATATTT 57.850 30.769 0.00 0.00 40.05 1.40
451 465 9.265862 AGGATCAACCCAAACATTTCATATTTA 57.734 29.630 0.00 0.00 40.05 1.40
452 466 9.533253 GGATCAACCCAAACATTTCATATTTAG 57.467 33.333 0.00 0.00 0.00 1.85
455 469 9.083422 TCAACCCAAACATTTCATATTTAGACA 57.917 29.630 0.00 0.00 0.00 3.41
456 470 9.703892 CAACCCAAACATTTCATATTTAGACAA 57.296 29.630 0.00 0.00 0.00 3.18
459 473 9.533253 CCCAAACATTTCATATTTAGACAATCC 57.467 33.333 0.00 0.00 0.00 3.01
495 509 4.695217 AAATTGTACAACATACCTGCGG 57.305 40.909 11.22 0.00 0.00 5.69
496 510 2.102070 TTGTACAACATACCTGCGGG 57.898 50.000 11.02 11.02 38.88 6.13
497 511 0.250793 TGTACAACATACCTGCGGGG 59.749 55.000 18.00 5.11 41.89 5.73
506 520 3.309582 CCTGCGGGGTGTGTCTAT 58.690 61.111 2.57 0.00 0.00 1.98
507 521 2.511818 CCTGCGGGGTGTGTCTATA 58.488 57.895 2.57 0.00 0.00 1.31
508 522 0.828022 CCTGCGGGGTGTGTCTATAA 59.172 55.000 2.57 0.00 0.00 0.98
509 523 1.472728 CCTGCGGGGTGTGTCTATAAC 60.473 57.143 2.57 0.00 0.00 1.89
510 524 1.480954 CTGCGGGGTGTGTCTATAACT 59.519 52.381 0.00 0.00 0.00 2.24
511 525 2.691526 CTGCGGGGTGTGTCTATAACTA 59.308 50.000 0.00 0.00 0.00 2.24
512 526 2.428171 TGCGGGGTGTGTCTATAACTAC 59.572 50.000 0.00 0.00 0.00 2.73
513 527 2.428171 GCGGGGTGTGTCTATAACTACA 59.572 50.000 0.00 0.00 0.00 2.74
514 528 3.119029 GCGGGGTGTGTCTATAACTACAA 60.119 47.826 0.00 0.00 0.00 2.41
515 529 4.621274 GCGGGGTGTGTCTATAACTACAAA 60.621 45.833 0.00 0.00 0.00 2.83
516 530 5.481105 CGGGGTGTGTCTATAACTACAAAA 58.519 41.667 0.00 0.00 0.00 2.44
517 531 6.110707 CGGGGTGTGTCTATAACTACAAAAT 58.889 40.000 0.00 0.00 0.00 1.82
518 532 6.036735 CGGGGTGTGTCTATAACTACAAAATG 59.963 42.308 0.00 0.00 0.00 2.32
519 533 7.107542 GGGGTGTGTCTATAACTACAAAATGA 58.892 38.462 0.00 0.00 0.00 2.57
520 534 7.608761 GGGGTGTGTCTATAACTACAAAATGAA 59.391 37.037 0.00 0.00 0.00 2.57
521 535 9.174166 GGGTGTGTCTATAACTACAAAATGAAT 57.826 33.333 0.00 0.00 0.00 2.57
533 547 8.579682 ACTACAAAATGAATTCAGCTCAAAAC 57.420 30.769 14.54 0.00 0.00 2.43
534 548 8.416329 ACTACAAAATGAATTCAGCTCAAAACT 58.584 29.630 14.54 0.00 0.00 2.66
535 549 7.704789 ACAAAATGAATTCAGCTCAAAACTC 57.295 32.000 14.54 0.00 0.00 3.01
536 550 6.418819 ACAAAATGAATTCAGCTCAAAACTCG 59.581 34.615 14.54 0.00 0.00 4.18
537 551 5.947228 AATGAATTCAGCTCAAAACTCGA 57.053 34.783 14.54 0.00 0.00 4.04
538 552 6.506500 AATGAATTCAGCTCAAAACTCGAT 57.493 33.333 14.54 0.00 0.00 3.59
539 553 5.536554 TGAATTCAGCTCAAAACTCGATC 57.463 39.130 3.38 0.00 0.00 3.69
540 554 5.240891 TGAATTCAGCTCAAAACTCGATCT 58.759 37.500 3.38 0.00 0.00 2.75
541 555 6.398095 TGAATTCAGCTCAAAACTCGATCTA 58.602 36.000 3.38 0.00 0.00 1.98
542 556 6.311445 TGAATTCAGCTCAAAACTCGATCTAC 59.689 38.462 3.38 0.00 0.00 2.59
543 557 4.783764 TCAGCTCAAAACTCGATCTACA 57.216 40.909 0.00 0.00 0.00 2.74
544 558 4.738124 TCAGCTCAAAACTCGATCTACAG 58.262 43.478 0.00 0.00 0.00 2.74
545 559 4.218635 TCAGCTCAAAACTCGATCTACAGT 59.781 41.667 0.00 0.00 0.00 3.55
546 560 4.926238 CAGCTCAAAACTCGATCTACAGTT 59.074 41.667 0.00 0.00 34.16 3.16
547 561 6.072119 TCAGCTCAAAACTCGATCTACAGTTA 60.072 38.462 2.92 0.00 32.36 2.24
548 562 6.252441 CAGCTCAAAACTCGATCTACAGTTAG 59.748 42.308 2.92 0.04 32.36 2.34
549 563 6.151312 AGCTCAAAACTCGATCTACAGTTAGA 59.849 38.462 2.92 4.19 38.76 2.10
550 564 6.470877 GCTCAAAACTCGATCTACAGTTAGAG 59.529 42.308 16.87 16.87 37.77 2.43
551 565 7.626664 GCTCAAAACTCGATCTACAGTTAGAGA 60.627 40.741 20.92 11.95 37.77 3.10
552 566 8.282455 TCAAAACTCGATCTACAGTTAGAGAT 57.718 34.615 4.93 0.00 37.77 2.75
553 567 8.740906 TCAAAACTCGATCTACAGTTAGAGATT 58.259 33.333 4.93 0.00 37.77 2.40
554 568 9.015577 CAAAACTCGATCTACAGTTAGAGATTC 57.984 37.037 4.93 0.00 37.77 2.52
555 569 8.514330 AAACTCGATCTACAGTTAGAGATTCT 57.486 34.615 4.93 0.00 37.77 2.40
556 570 9.616156 AAACTCGATCTACAGTTAGAGATTCTA 57.384 33.333 4.93 0.00 37.77 2.10
557 571 9.616156 AACTCGATCTACAGTTAGAGATTCTAA 57.384 33.333 4.93 0.00 37.77 2.10
558 572 9.616156 ACTCGATCTACAGTTAGAGATTCTAAA 57.384 33.333 0.42 0.00 40.30 1.85
586 600 9.725019 AGACAAATTTGACTATGAATAGTGTGA 57.275 29.630 24.64 0.00 43.27 3.58
587 601 9.979270 GACAAATTTGACTATGAATAGTGTGAG 57.021 33.333 24.64 0.00 43.27 3.51
588 602 8.454106 ACAAATTTGACTATGAATAGTGTGAGC 58.546 33.333 24.64 0.00 43.27 4.26
589 603 8.671921 CAAATTTGACTATGAATAGTGTGAGCT 58.328 33.333 13.08 0.00 43.27 4.09
590 604 8.798859 AATTTGACTATGAATAGTGTGAGCTT 57.201 30.769 7.70 0.00 43.27 3.74
591 605 8.798859 ATTTGACTATGAATAGTGTGAGCTTT 57.201 30.769 7.70 0.00 43.27 3.51
592 606 8.621532 TTTGACTATGAATAGTGTGAGCTTTT 57.378 30.769 7.70 0.00 43.27 2.27
593 607 7.601073 TGACTATGAATAGTGTGAGCTTTTG 57.399 36.000 7.70 0.00 43.27 2.44
594 608 6.595326 TGACTATGAATAGTGTGAGCTTTTGG 59.405 38.462 7.70 0.00 43.27 3.28
595 609 5.882557 ACTATGAATAGTGTGAGCTTTTGGG 59.117 40.000 2.15 0.00 41.77 4.12
596 610 2.819608 TGAATAGTGTGAGCTTTTGGGC 59.180 45.455 0.00 0.00 0.00 5.36
597 611 1.453155 ATAGTGTGAGCTTTTGGGCG 58.547 50.000 0.00 0.00 37.29 6.13
598 612 0.394938 TAGTGTGAGCTTTTGGGCGA 59.605 50.000 0.00 0.00 37.29 5.54
599 613 0.465460 AGTGTGAGCTTTTGGGCGAA 60.465 50.000 0.00 0.00 37.29 4.70
600 614 0.598065 GTGTGAGCTTTTGGGCGAAT 59.402 50.000 0.00 0.00 37.29 3.34
601 615 1.810151 GTGTGAGCTTTTGGGCGAATA 59.190 47.619 0.00 0.00 37.29 1.75
602 616 2.423538 GTGTGAGCTTTTGGGCGAATAT 59.576 45.455 0.00 0.00 37.29 1.28
603 617 3.088532 TGTGAGCTTTTGGGCGAATATT 58.911 40.909 0.00 0.00 37.29 1.28
604 618 4.095782 GTGTGAGCTTTTGGGCGAATATTA 59.904 41.667 0.00 0.00 37.29 0.98
605 619 4.887071 TGTGAGCTTTTGGGCGAATATTAT 59.113 37.500 0.00 0.00 37.29 1.28
606 620 5.359576 TGTGAGCTTTTGGGCGAATATTATT 59.640 36.000 0.00 0.00 37.29 1.40
607 621 6.127479 TGTGAGCTTTTGGGCGAATATTATTT 60.127 34.615 0.00 0.00 37.29 1.40
608 622 6.198966 GTGAGCTTTTGGGCGAATATTATTTG 59.801 38.462 0.00 0.00 37.29 2.32
609 623 6.096141 TGAGCTTTTGGGCGAATATTATTTGA 59.904 34.615 7.69 0.00 37.29 2.69
610 624 6.273071 AGCTTTTGGGCGAATATTATTTGAC 58.727 36.000 7.69 4.59 37.29 3.18
611 625 6.039616 GCTTTTGGGCGAATATTATTTGACA 58.960 36.000 10.96 5.07 0.00 3.58
612 626 6.019881 GCTTTTGGGCGAATATTATTTGACAC 60.020 38.462 10.96 3.55 0.00 3.67
613 627 6.767524 TTTGGGCGAATATTATTTGACACT 57.232 33.333 10.96 0.00 0.00 3.55
614 628 7.867305 TTTGGGCGAATATTATTTGACACTA 57.133 32.000 10.96 0.00 0.00 2.74
615 629 8.458573 TTTGGGCGAATATTATTTGACACTAT 57.541 30.769 10.96 0.00 0.00 2.12
616 630 8.458573 TTGGGCGAATATTATTTGACACTATT 57.541 30.769 10.96 0.00 0.00 1.73
617 631 8.094798 TGGGCGAATATTATTTGACACTATTC 57.905 34.615 10.96 0.00 0.00 1.75
618 632 7.717436 TGGGCGAATATTATTTGACACTATTCA 59.283 33.333 10.96 0.00 31.36 2.57
619 633 8.015658 GGGCGAATATTATTTGACACTATTCAC 58.984 37.037 10.96 0.00 31.36 3.18
620 634 8.556194 GGCGAATATTATTTGACACTATTCACA 58.444 33.333 7.69 0.00 31.36 3.58
630 644 7.984422 TTGACACTATTCACATCTGATTTGT 57.016 32.000 3.92 0.00 0.00 2.83
631 645 7.601073 TGACACTATTCACATCTGATTTGTC 57.399 36.000 3.92 0.00 0.00 3.18
632 646 7.389232 TGACACTATTCACATCTGATTTGTCT 58.611 34.615 3.92 0.00 0.00 3.41
633 647 7.879677 TGACACTATTCACATCTGATTTGTCTT 59.120 33.333 3.92 0.00 0.00 3.01
634 648 8.627208 ACACTATTCACATCTGATTTGTCTTT 57.373 30.769 3.92 0.00 0.00 2.52
635 649 9.071276 ACACTATTCACATCTGATTTGTCTTTT 57.929 29.630 3.92 0.00 0.00 2.27
636 650 9.903682 CACTATTCACATCTGATTTGTCTTTTT 57.096 29.630 3.92 0.00 0.00 1.94
657 671 6.548441 TTTTGGTCCAATAAGTGTAGTTCG 57.452 37.500 4.80 0.00 0.00 3.95
658 672 5.471556 TTGGTCCAATAAGTGTAGTTCGA 57.528 39.130 0.00 0.00 0.00 3.71
659 673 5.471556 TGGTCCAATAAGTGTAGTTCGAA 57.528 39.130 0.00 0.00 0.00 3.71
660 674 6.045072 TGGTCCAATAAGTGTAGTTCGAAT 57.955 37.500 0.00 0.00 0.00 3.34
661 675 6.469410 TGGTCCAATAAGTGTAGTTCGAATT 58.531 36.000 0.00 0.00 0.00 2.17
662 676 7.613585 TGGTCCAATAAGTGTAGTTCGAATTA 58.386 34.615 0.00 0.00 0.00 1.40
663 677 7.762615 TGGTCCAATAAGTGTAGTTCGAATTAG 59.237 37.037 0.00 0.00 0.00 1.73
664 678 7.224167 GGTCCAATAAGTGTAGTTCGAATTAGG 59.776 40.741 0.00 0.00 0.00 2.69
665 679 7.977853 GTCCAATAAGTGTAGTTCGAATTAGGA 59.022 37.037 0.00 0.00 0.00 2.94
666 680 8.195436 TCCAATAAGTGTAGTTCGAATTAGGAG 58.805 37.037 0.00 0.00 0.00 3.69
667 681 7.042658 CCAATAAGTGTAGTTCGAATTAGGAGC 60.043 40.741 0.00 0.00 0.00 4.70
668 682 5.662674 AAGTGTAGTTCGAATTAGGAGCT 57.337 39.130 0.00 0.00 0.00 4.09
669 683 5.000012 AGTGTAGTTCGAATTAGGAGCTG 58.000 43.478 0.00 0.00 0.00 4.24
670 684 4.705507 AGTGTAGTTCGAATTAGGAGCTGA 59.294 41.667 0.00 0.00 0.00 4.26
671 685 5.185249 AGTGTAGTTCGAATTAGGAGCTGAA 59.815 40.000 0.00 0.00 0.00 3.02
672 686 5.867716 GTGTAGTTCGAATTAGGAGCTGAAA 59.132 40.000 0.00 0.00 0.00 2.69
673 687 5.867716 TGTAGTTCGAATTAGGAGCTGAAAC 59.132 40.000 0.00 0.00 0.00 2.78
674 688 5.153950 AGTTCGAATTAGGAGCTGAAACT 57.846 39.130 0.00 0.00 0.00 2.66
675 689 5.552178 AGTTCGAATTAGGAGCTGAAACTT 58.448 37.500 0.00 0.00 0.00 2.66
676 690 5.998363 AGTTCGAATTAGGAGCTGAAACTTT 59.002 36.000 0.00 0.00 0.00 2.66
677 691 6.486993 AGTTCGAATTAGGAGCTGAAACTTTT 59.513 34.615 0.00 0.00 0.00 2.27
678 692 6.877611 TCGAATTAGGAGCTGAAACTTTTT 57.122 33.333 0.00 0.00 0.00 1.94
679 693 6.668323 TCGAATTAGGAGCTGAAACTTTTTG 58.332 36.000 0.00 0.00 0.00 2.44
680 694 6.485313 TCGAATTAGGAGCTGAAACTTTTTGA 59.515 34.615 0.00 0.00 0.00 2.69
681 695 6.798959 CGAATTAGGAGCTGAAACTTTTTGAG 59.201 38.462 0.00 0.00 0.00 3.02
682 696 3.998099 AGGAGCTGAAACTTTTTGAGC 57.002 42.857 0.00 2.29 0.00 4.26
683 697 3.560105 AGGAGCTGAAACTTTTTGAGCT 58.440 40.909 11.71 11.71 38.33 4.09
684 698 3.956848 AGGAGCTGAAACTTTTTGAGCTT 59.043 39.130 12.87 0.00 36.79 3.74
685 699 4.047142 GGAGCTGAAACTTTTTGAGCTTG 58.953 43.478 12.87 0.00 36.79 4.01
686 700 4.440663 GGAGCTGAAACTTTTTGAGCTTGT 60.441 41.667 12.87 0.00 36.79 3.16
687 701 5.221048 GGAGCTGAAACTTTTTGAGCTTGTA 60.221 40.000 12.87 0.00 36.79 2.41
688 702 5.582550 AGCTGAAACTTTTTGAGCTTGTAC 58.417 37.500 6.78 0.00 34.52 2.90
689 703 5.125417 AGCTGAAACTTTTTGAGCTTGTACA 59.875 36.000 6.78 0.00 34.52 2.90
690 704 5.979517 GCTGAAACTTTTTGAGCTTGTACAT 59.020 36.000 0.00 0.00 0.00 2.29
691 705 6.142958 GCTGAAACTTTTTGAGCTTGTACATC 59.857 38.462 0.00 0.00 0.00 3.06
692 706 7.094508 TGAAACTTTTTGAGCTTGTACATCA 57.905 32.000 0.00 0.00 0.00 3.07
693 707 6.972328 TGAAACTTTTTGAGCTTGTACATCAC 59.028 34.615 0.00 0.00 0.00 3.06
694 708 6.449635 AACTTTTTGAGCTTGTACATCACA 57.550 33.333 0.00 0.00 34.51 3.58
695 709 5.821204 ACTTTTTGAGCTTGTACATCACAC 58.179 37.500 0.00 0.00 36.69 3.82
696 710 5.356751 ACTTTTTGAGCTTGTACATCACACA 59.643 36.000 0.00 0.00 36.69 3.72
697 711 6.039717 ACTTTTTGAGCTTGTACATCACACAT 59.960 34.615 0.00 0.00 36.69 3.21
698 712 5.361135 TTTGAGCTTGTACATCACACATG 57.639 39.130 0.00 0.00 36.69 3.21
699 713 4.270245 TGAGCTTGTACATCACACATGA 57.730 40.909 0.00 0.00 36.69 3.07
700 714 4.640364 TGAGCTTGTACATCACACATGAA 58.360 39.130 0.00 0.00 38.69 2.57
701 715 5.247862 TGAGCTTGTACATCACACATGAAT 58.752 37.500 0.00 0.00 38.69 2.57
702 716 5.122711 TGAGCTTGTACATCACACATGAATG 59.877 40.000 0.00 0.00 38.69 2.67
703 717 5.005740 AGCTTGTACATCACACATGAATGT 58.994 37.500 0.00 6.38 42.84 2.71
717 731 6.409524 ACATGAATGTGTGTCTCCAATTTT 57.590 33.333 0.00 0.00 40.03 1.82
718 732 6.819284 ACATGAATGTGTGTCTCCAATTTTT 58.181 32.000 0.00 0.00 40.03 1.94
786 800 8.539117 TCACATTGATCTCACCTAAGAATAGA 57.461 34.615 0.00 0.00 0.00 1.98
787 801 9.152327 TCACATTGATCTCACCTAAGAATAGAT 57.848 33.333 0.00 0.00 0.00 1.98
788 802 9.421806 CACATTGATCTCACCTAAGAATAGATC 57.578 37.037 0.00 0.00 41.82 2.75
789 803 9.378504 ACATTGATCTCACCTAAGAATAGATCT 57.621 33.333 0.00 0.00 41.93 2.75
809 823 8.196378 AGATCTTATATACAAGTCTTCCCCAC 57.804 38.462 0.00 0.00 0.00 4.61
810 824 7.789831 AGATCTTATATACAAGTCTTCCCCACA 59.210 37.037 0.00 0.00 0.00 4.17
811 825 7.931015 TCTTATATACAAGTCTTCCCCACAT 57.069 36.000 0.00 0.00 0.00 3.21
812 826 8.331931 TCTTATATACAAGTCTTCCCCACATT 57.668 34.615 0.00 0.00 0.00 2.71
813 827 8.778059 TCTTATATACAAGTCTTCCCCACATTT 58.222 33.333 0.00 0.00 0.00 2.32
814 828 8.746052 TTATATACAAGTCTTCCCCACATTTG 57.254 34.615 0.00 0.00 0.00 2.32
842 856 1.228769 TAGGTCCCACACGTCAGCT 60.229 57.895 0.00 0.00 0.00 4.24
885 899 1.450312 GGTGGTGATCAGGGCTTCG 60.450 63.158 0.00 0.00 0.00 3.79
1340 1355 3.355378 TCGACTGGGACGAAGGTATTTA 58.645 45.455 0.00 0.00 36.84 1.40
1342 1357 3.129988 CGACTGGGACGAAGGTATTTACT 59.870 47.826 0.00 0.00 0.00 2.24
1354 1369 7.039882 CGAAGGTATTTACTGTCACCTACATT 58.960 38.462 0.00 0.00 40.54 2.71
1357 1372 7.039882 AGGTATTTACTGTCACCTACATTTCG 58.960 38.462 0.00 0.00 39.64 3.46
1364 1379 1.349688 TCACCTACATTTCGGCCTGTT 59.650 47.619 0.00 0.00 0.00 3.16
1379 1394 2.355209 GCCTGTTAGGGTTCTTCTGAGG 60.355 54.545 0.00 0.00 35.37 3.86
1388 1403 1.067495 GTTCTTCTGAGGTGACCGAGG 60.067 57.143 0.00 0.00 0.00 4.63
1414 1429 8.514594 GGATATCTGATGACTAGAGTTCAAGAG 58.485 40.741 2.05 0.00 0.00 2.85
1447 1462 1.541147 CTGGATTGTGTTTGCGATGGT 59.459 47.619 0.00 0.00 0.00 3.55
1466 1481 8.921670 GCGATGGTTGTTTTTGTATAAGAAATT 58.078 29.630 0.00 0.00 0.00 1.82
1470 1485 8.543774 TGGTTGTTTTTGTATAAGAAATTTGCG 58.456 29.630 0.00 0.00 0.00 4.85
1512 1527 5.968676 AGCTGTATTGGGGTAGTTAATCA 57.031 39.130 0.00 0.00 0.00 2.57
1547 1566 4.393834 TCTGTTACCTGCAAATTGCTGTA 58.606 39.130 19.34 16.17 45.31 2.74
1579 1598 2.311124 CCTGTTTAGGTCCGGACATC 57.689 55.000 34.40 19.09 39.39 3.06
1642 1661 1.470098 CTGTACAAAGAGCATGCCCAC 59.530 52.381 15.66 6.55 0.00 4.61
1690 1709 2.102084 TCGCTGCTTCTGCTCTAATGAT 59.898 45.455 0.00 0.00 40.48 2.45
1724 1744 2.354259 CTCTCCTGACCTGCATGTTTC 58.646 52.381 0.00 0.00 0.00 2.78
1740 1760 7.007314 GCATGTTTCCCTGCTTAGTGAAACT 62.007 44.000 13.65 0.00 44.22 2.66
1742 1762 9.126757 GCATGTTTCCCTGCTTAGTGAAACTTA 62.127 40.741 13.65 0.00 44.22 2.24
1766 1786 0.107831 TCCTGGTTCCAAGTTCCACG 59.892 55.000 0.00 0.00 0.00 4.94
1919 1949 3.071602 ACATCCTACCATGACCACTATGC 59.928 47.826 0.00 0.00 0.00 3.14
1924 1954 3.650281 ACCATGACCACTATGCATGAA 57.350 42.857 10.16 0.00 41.35 2.57
1936 1966 8.530311 ACCACTATGCATGAATCATTTAAAACA 58.470 29.630 10.16 0.00 0.00 2.83
1955 1985 1.269448 CACGGTGAACAATTTGAGGGG 59.731 52.381 0.74 0.00 0.00 4.79
1979 2011 5.501897 GCGTTATTTCGAGTAAACTCATGGG 60.502 44.000 10.55 0.00 43.00 4.00
1988 2020 2.085343 AAACTCATGGGCTGGCCTGT 62.085 55.000 21.72 11.56 36.10 4.00
2000 2032 2.802816 GCTGGCCTGTCTGTAATATTCG 59.197 50.000 11.69 0.00 0.00 3.34
2031 2063 3.219052 AGTAGCTCGTCTAACAAGTGC 57.781 47.619 0.00 0.00 0.00 4.40
2063 2095 5.049405 GCTTCAGGAACTCGAGAAAATGAAA 60.049 40.000 21.68 4.24 34.60 2.69
2243 2275 4.034048 CGTGGTGAGGTAATGACATAAAGC 59.966 45.833 0.00 0.00 0.00 3.51
2272 2320 3.810743 GCCTATGTTTTCAGGTCCACACT 60.811 47.826 0.00 0.00 34.18 3.55
2326 2374 6.939132 AATCCAAAATTTGTGAATTGTGCA 57.061 29.167 4.92 0.00 38.58 4.57
2360 2408 8.893727 CAGTGATATACATATACTGACCATCGA 58.106 37.037 0.00 0.00 40.80 3.59
2401 2449 4.278419 AGTTGGAATCTAAACACACTTGGC 59.722 41.667 3.12 0.00 0.00 4.52
2407 2455 5.705609 ATCTAAACACACTTGGCGATTTT 57.294 34.783 0.00 0.00 0.00 1.82
2482 2530 0.604780 ATGCTACCATGCGCATCTCC 60.605 55.000 22.51 7.94 42.83 3.71
2543 2592 1.140452 ACTTCTGATCATCTGGCGCAT 59.860 47.619 10.83 0.00 0.00 4.73
2648 2742 0.514255 CTGCACCTGTGTCGTGATTG 59.486 55.000 0.00 0.00 32.77 2.67
2650 2744 0.944386 GCACCTGTGTCGTGATTGTT 59.056 50.000 0.00 0.00 32.77 2.83
2728 2822 5.327616 TCAAATGCAATGTTATGACCCTG 57.672 39.130 0.00 0.00 0.00 4.45
2826 2920 0.252197 AACGTCATGGGGCTACTTCC 59.748 55.000 0.00 0.00 0.00 3.46
2900 2995 6.000891 TCAATTATGTGACTGTCAAACTGC 57.999 37.500 12.81 0.02 0.00 4.40
2921 3016 7.441017 ACTGCATTCTTGATATACTTCTCTCC 58.559 38.462 0.00 0.00 0.00 3.71
2999 3099 8.238631 GGACATATTTTACTTTTGAAAGGCGTA 58.761 33.333 8.23 0.00 40.31 4.42
3081 3182 5.353938 CCTCAGGCAATGGTCAATTATTTG 58.646 41.667 0.00 0.00 0.00 2.32
3166 3270 4.409247 AGTTTGTCAACTCTTACTCTGGGT 59.591 41.667 0.00 0.00 39.15 4.51
3176 3280 4.714632 TCTTACTCTGGGTGGTTTTGAAG 58.285 43.478 0.00 0.00 0.00 3.02
3197 3301 8.073467 TGAAGAACATAAGGACCTTTTGTTTT 57.927 30.769 31.28 26.09 42.42 2.43
3355 3460 4.141390 ACCTTTCTCCTCACTTGAACATGT 60.141 41.667 0.00 0.00 0.00 3.21
3451 3556 3.493334 TCTACGGTCACTTCCTTCTGAA 58.507 45.455 0.00 0.00 0.00 3.02
3544 3649 8.635765 TTGCTAAAGTAAGACTGGAATTCAAT 57.364 30.769 7.93 0.00 0.00 2.57
3545 3650 8.635765 TGCTAAAGTAAGACTGGAATTCAATT 57.364 30.769 7.93 0.00 0.00 2.32
3546 3651 9.077885 TGCTAAAGTAAGACTGGAATTCAATTT 57.922 29.630 7.93 0.00 0.00 1.82
3547 3652 9.914131 GCTAAAGTAAGACTGGAATTCAATTTT 57.086 29.630 7.93 0.00 0.00 1.82
3611 3719 3.391296 ACATGCTAAAGGGATACGTGGAT 59.609 43.478 0.00 0.00 37.60 3.41
3643 3751 7.656137 TGACACAGTATTTGGTTCTAAGAGTTC 59.344 37.037 0.00 0.00 0.00 3.01
3680 3788 1.000274 ACCACCAAAAGAAAGCGATGC 60.000 47.619 0.00 0.00 0.00 3.91
3960 4077 7.761038 ATTTACCCTTTTCCTGAACTAACTG 57.239 36.000 0.00 0.00 0.00 3.16
3962 4079 2.484264 CCCTTTTCCTGAACTAACTGCG 59.516 50.000 0.00 0.00 0.00 5.18
3978 4095 4.250116 ACTGCGAAATTGTTGCCAAATA 57.750 36.364 0.00 0.00 33.44 1.40
3983 4100 5.804473 TGCGAAATTGTTGCCAAATATGTAG 59.196 36.000 0.00 0.00 33.44 2.74
3989 4106 5.309323 TGTTGCCAAATATGTAGTCTTGC 57.691 39.130 0.00 0.00 0.00 4.01
4008 4125 4.389890 TGCAAATTGCTTTGACTGAGTT 57.610 36.364 19.34 0.00 45.31 3.01
4017 4134 2.561478 TTGACTGAGTTTGGTAGGCC 57.439 50.000 0.00 0.00 0.00 5.19
4019 4136 2.897350 TGACTGAGTTTGGTAGGCCTA 58.103 47.619 8.91 8.91 35.27 3.93
4023 4140 4.104831 ACTGAGTTTGGTAGGCCTATTCT 58.895 43.478 17.38 9.92 35.27 2.40
4024 4141 4.080863 ACTGAGTTTGGTAGGCCTATTCTG 60.081 45.833 17.38 7.94 35.27 3.02
4242 4360 1.369625 GTCAGTGTTATTGAGGGCGG 58.630 55.000 0.00 0.00 0.00 6.13
4273 4391 3.320541 TGATTTTGTTGCCAACGGAATCT 59.679 39.130 23.98 7.54 36.79 2.40
4302 4420 0.890683 CCTGGGCTGTTTCAATGGTC 59.109 55.000 0.00 0.00 0.00 4.02
4356 4474 5.452078 TTAATTTTGGACTGCCTCAACAG 57.548 39.130 0.00 0.00 43.59 3.16
4428 4546 3.198853 ACTTCTGGAAGCAACCTATCTCC 59.801 47.826 9.91 0.00 41.99 3.71
4526 4644 5.104193 ACAATCCTGGCTGATATCAAGTTCT 60.104 40.000 6.90 0.00 0.00 3.01
4592 4710 6.862209 ACAACTGAAAGAAACAACTAATGCA 58.138 32.000 0.00 0.00 37.43 3.96
4602 4720 9.762933 AAGAAACAACTAATGCACATTGTATTT 57.237 25.926 6.13 6.86 34.57 1.40
4603 4721 9.762933 AGAAACAACTAATGCACATTGTATTTT 57.237 25.926 6.13 5.67 34.57 1.82
4652 4770 4.891168 TCACTATTTATGCCACTCCGAGTA 59.109 41.667 0.00 0.00 0.00 2.59
4826 4944 2.749800 GCAGAAACAACAAGAGTCCCCT 60.750 50.000 0.00 0.00 0.00 4.79
4858 4976 1.078988 TTCCCGCGGCTTCGTAAAT 60.079 52.632 22.85 0.00 36.07 1.40
5017 5136 0.535102 CTTCCGTTGCTGGGAACACT 60.535 55.000 5.88 0.00 38.60 3.55
5130 5251 8.922931 TGCCAATATTTGATGATGTACTACAT 57.077 30.769 1.01 1.01 42.43 2.29
5151 5272 9.424319 CTACATAGATATTTTCTACGCCATGTT 57.576 33.333 0.00 0.00 39.75 2.71
5161 5282 5.712217 TCTACGCCATGTTCTTTTATTCG 57.288 39.130 0.00 0.00 0.00 3.34
5220 5749 9.591792 AAAGAAAAGAATTCTTTCACCTTTGAG 57.408 29.630 30.10 0.00 44.69 3.02
5251 5781 4.278975 AGAAAATGCCTCTCGAGTTCTT 57.721 40.909 13.13 0.00 0.00 2.52
5261 5791 4.439426 CCTCTCGAGTTCTTGATGTACCTG 60.439 50.000 13.13 0.00 0.00 4.00
5289 5822 6.992063 ATGCATCTTCGAACTGAAATACTT 57.008 33.333 0.00 0.00 35.79 2.24
5290 5823 8.492673 AATGCATCTTCGAACTGAAATACTTA 57.507 30.769 0.00 0.00 35.79 2.24
5350 5887 6.316390 CACACACTTATTTAGAATGGAGGGAC 59.684 42.308 0.00 0.00 0.00 4.46
5392 5961 8.446273 AGACATTTGCTTCATATATGAATACGC 58.554 33.333 24.77 23.32 44.92 4.42
5413 5982 7.372451 ACGCTAGTGTAAGCATTTGAAAATA 57.628 32.000 7.28 0.00 42.91 1.40
5487 6056 7.885399 GGCCAATCAAGATCCTATTATTGTAGT 59.115 37.037 0.00 0.00 0.00 2.73
5529 6098 9.979578 AGAATTACTGTTATTGCATGAAAAACA 57.020 25.926 0.00 5.54 0.00 2.83
5532 6101 5.911752 ACTGTTATTGCATGAAAAACACCA 58.088 33.333 0.00 0.00 0.00 4.17
5548 6117 0.108396 ACCATTTGTTTTGGGCAGCC 59.892 50.000 1.26 1.26 38.64 4.85
5583 6152 8.870160 TTTTTGTGATGGATTGTTTTAGTCAG 57.130 30.769 0.00 0.00 0.00 3.51
5587 6156 4.759693 TGATGGATTGTTTTAGTCAGCGTT 59.240 37.500 0.00 0.00 0.00 4.84
5590 6159 3.252458 GGATTGTTTTAGTCAGCGTTGGT 59.748 43.478 0.00 0.00 0.00 3.67
5601 6170 0.036164 AGCGTTGGTAGCATGGTTGA 59.964 50.000 1.12 0.00 37.01 3.18
5602 6171 0.447801 GCGTTGGTAGCATGGTTGAG 59.552 55.000 1.12 0.00 34.19 3.02
5603 6172 1.943968 GCGTTGGTAGCATGGTTGAGA 60.944 52.381 1.12 0.00 34.19 3.27
5604 6173 2.002586 CGTTGGTAGCATGGTTGAGAG 58.997 52.381 1.12 0.00 0.00 3.20
5605 6174 2.359900 GTTGGTAGCATGGTTGAGAGG 58.640 52.381 1.12 0.00 0.00 3.69
5606 6175 1.951209 TGGTAGCATGGTTGAGAGGA 58.049 50.000 1.12 0.00 0.00 3.71
5607 6176 2.481441 TGGTAGCATGGTTGAGAGGAT 58.519 47.619 1.12 0.00 0.00 3.24
5608 6177 2.846206 TGGTAGCATGGTTGAGAGGATT 59.154 45.455 1.12 0.00 0.00 3.01
5609 6178 3.118261 TGGTAGCATGGTTGAGAGGATTC 60.118 47.826 1.12 0.00 0.00 2.52
5610 6179 3.118261 GGTAGCATGGTTGAGAGGATTCA 60.118 47.826 1.12 0.00 0.00 2.57
5611 6180 3.947612 AGCATGGTTGAGAGGATTCAT 57.052 42.857 0.00 0.00 0.00 2.57
5612 6181 5.221722 GGTAGCATGGTTGAGAGGATTCATA 60.222 44.000 1.12 0.00 0.00 2.15
5613 6182 5.579753 AGCATGGTTGAGAGGATTCATAT 57.420 39.130 0.00 0.00 0.00 1.78
5614 6183 6.692849 AGCATGGTTGAGAGGATTCATATA 57.307 37.500 0.00 0.00 0.00 0.86
5615 6184 7.083062 AGCATGGTTGAGAGGATTCATATAA 57.917 36.000 0.00 0.00 0.00 0.98
5616 6185 7.520798 AGCATGGTTGAGAGGATTCATATAAA 58.479 34.615 0.00 0.00 0.00 1.40
5617 6186 7.446625 AGCATGGTTGAGAGGATTCATATAAAC 59.553 37.037 0.00 0.00 0.00 2.01
5618 6187 7.308830 GCATGGTTGAGAGGATTCATATAAACC 60.309 40.741 5.44 5.44 0.00 3.27
5619 6188 7.206789 TGGTTGAGAGGATTCATATAAACCA 57.793 36.000 10.21 10.21 33.04 3.67
5620 6189 7.054124 TGGTTGAGAGGATTCATATAAACCAC 58.946 38.462 10.21 0.00 31.42 4.16
5621 6190 6.486993 GGTTGAGAGGATTCATATAAACCACC 59.513 42.308 7.24 0.00 0.00 4.61
5622 6191 6.187727 TGAGAGGATTCATATAAACCACCC 57.812 41.667 0.00 0.00 0.00 4.61
5623 6192 5.221641 TGAGAGGATTCATATAAACCACCCG 60.222 44.000 0.00 0.00 0.00 5.28
5624 6193 3.751518 AGGATTCATATAAACCACCCGC 58.248 45.455 0.00 0.00 0.00 6.13
5625 6194 3.137544 AGGATTCATATAAACCACCCGCA 59.862 43.478 0.00 0.00 0.00 5.69
5626 6195 3.886505 GGATTCATATAAACCACCCGCAA 59.113 43.478 0.00 0.00 0.00 4.85
5627 6196 4.339814 GGATTCATATAAACCACCCGCAAA 59.660 41.667 0.00 0.00 0.00 3.68
5628 6197 5.163499 GGATTCATATAAACCACCCGCAAAA 60.163 40.000 0.00 0.00 0.00 2.44
5629 6198 5.723672 TTCATATAAACCACCCGCAAAAA 57.276 34.783 0.00 0.00 0.00 1.94
5668 6237 3.104843 ACCAGAGCTAGATTCAATCGC 57.895 47.619 0.00 0.00 0.00 4.58
5673 6242 3.067461 AGAGCTAGATTCAATCGCGAACT 59.933 43.478 15.24 8.55 0.00 3.01
5700 6272 4.389077 CGTAGCTCTAGTTTGGTTTCTTGG 59.611 45.833 0.00 0.00 0.00 3.61
5704 6276 3.821033 CTCTAGTTTGGTTTCTTGGTGGG 59.179 47.826 0.00 0.00 0.00 4.61
5705 6277 2.838637 AGTTTGGTTTCTTGGTGGGA 57.161 45.000 0.00 0.00 0.00 4.37
5706 6278 3.108847 AGTTTGGTTTCTTGGTGGGAA 57.891 42.857 0.00 0.00 0.00 3.97
5707 6279 2.764010 AGTTTGGTTTCTTGGTGGGAAC 59.236 45.455 0.00 0.00 0.00 3.62
5709 6281 2.065899 TGGTTTCTTGGTGGGAACAG 57.934 50.000 0.00 0.00 44.46 3.16
5736 6310 3.006537 TCAAGGTTCAAGTTCTAGACCGG 59.993 47.826 0.00 0.00 0.00 5.28
5739 6313 4.154942 AGGTTCAAGTTCTAGACCGGTAA 58.845 43.478 7.34 0.00 0.00 2.85
5743 6317 2.830321 CAAGTTCTAGACCGGTAAGGGT 59.170 50.000 7.34 0.00 46.96 4.34
5755 6329 1.408266 GGTAAGGGTAGGGTGTGCATG 60.408 57.143 0.00 0.00 0.00 4.06
5756 6330 0.254747 TAAGGGTAGGGTGTGCATGC 59.745 55.000 11.82 11.82 0.00 4.06
5757 6331 2.440247 GGGTAGGGTGTGCATGCC 60.440 66.667 16.68 7.25 0.00 4.40
5758 6332 2.677228 GGTAGGGTGTGCATGCCT 59.323 61.111 16.68 6.95 0.00 4.75
5759 6333 1.000896 GGTAGGGTGTGCATGCCTT 60.001 57.895 16.68 0.00 0.00 4.35
5760 6334 1.032114 GGTAGGGTGTGCATGCCTTC 61.032 60.000 16.68 6.46 0.00 3.46
5761 6335 0.322456 GTAGGGTGTGCATGCCTTCA 60.322 55.000 16.68 9.18 0.00 3.02
5762 6336 0.625316 TAGGGTGTGCATGCCTTCAT 59.375 50.000 16.68 2.59 0.00 2.57
5763 6337 0.251922 AGGGTGTGCATGCCTTCATT 60.252 50.000 16.68 0.00 0.00 2.57
5764 6338 0.174162 GGGTGTGCATGCCTTCATTC 59.826 55.000 16.68 8.36 0.00 2.67
5765 6339 0.889994 GGTGTGCATGCCTTCATTCA 59.110 50.000 16.68 0.39 0.00 2.57
5766 6340 1.403249 GGTGTGCATGCCTTCATTCAC 60.403 52.381 16.68 11.86 43.85 3.18
5768 6342 1.542472 TGTGCATGCCTTCATTCACAG 59.458 47.619 16.68 0.00 46.57 3.66
5769 6343 1.135199 GTGCATGCCTTCATTCACAGG 60.135 52.381 16.68 0.00 43.32 4.00
5770 6344 0.458669 GCATGCCTTCATTCACAGGG 59.541 55.000 6.36 0.00 0.00 4.45
5771 6345 1.108776 CATGCCTTCATTCACAGGGG 58.891 55.000 0.00 0.00 0.00 4.79
5772 6346 0.706433 ATGCCTTCATTCACAGGGGT 59.294 50.000 0.00 0.00 0.00 4.95
5773 6347 0.251297 TGCCTTCATTCACAGGGGTG 60.251 55.000 0.00 0.00 46.66 4.61
5784 6358 0.324943 ACAGGGGTGAGTGTATGTGC 59.675 55.000 0.00 0.00 0.00 4.57
5785 6359 0.324614 CAGGGGTGAGTGTATGTGCA 59.675 55.000 0.00 0.00 0.00 4.57
5786 6360 1.065199 CAGGGGTGAGTGTATGTGCAT 60.065 52.381 0.00 0.00 0.00 3.96
5787 6361 1.635487 AGGGGTGAGTGTATGTGCATT 59.365 47.619 0.00 0.00 0.00 3.56
5788 6362 2.041620 AGGGGTGAGTGTATGTGCATTT 59.958 45.455 0.00 0.00 0.00 2.32
5789 6363 3.265737 AGGGGTGAGTGTATGTGCATTTA 59.734 43.478 0.00 0.00 0.00 1.40
5790 6364 4.079787 AGGGGTGAGTGTATGTGCATTTAT 60.080 41.667 0.00 0.00 0.00 1.40
5791 6365 5.131977 AGGGGTGAGTGTATGTGCATTTATA 59.868 40.000 0.00 0.00 0.00 0.98
5792 6366 6.003950 GGGGTGAGTGTATGTGCATTTATAT 58.996 40.000 0.00 0.00 0.00 0.86
5793 6367 6.072508 GGGGTGAGTGTATGTGCATTTATATG 60.073 42.308 0.00 0.00 34.76 1.78
5794 6368 6.710295 GGGTGAGTGTATGTGCATTTATATGA 59.290 38.462 0.00 0.00 33.37 2.15
5795 6369 7.095060 GGGTGAGTGTATGTGCATTTATATGAG 60.095 40.741 0.00 0.00 33.37 2.90
5796 6370 7.293745 GTGAGTGTATGTGCATTTATATGAGC 58.706 38.462 0.00 0.00 33.37 4.26
5797 6371 6.146021 TGAGTGTATGTGCATTTATATGAGCG 59.854 38.462 0.00 0.00 33.37 5.03
5798 6372 5.991606 AGTGTATGTGCATTTATATGAGCGT 59.008 36.000 0.00 0.00 33.37 5.07
5799 6373 6.483307 AGTGTATGTGCATTTATATGAGCGTT 59.517 34.615 0.00 0.00 33.37 4.84
5800 6374 6.792250 GTGTATGTGCATTTATATGAGCGTTC 59.208 38.462 0.00 0.00 33.37 3.95
5801 6375 4.451379 TGTGCATTTATATGAGCGTTCG 57.549 40.909 0.00 0.00 33.37 3.95
5802 6376 3.218398 GTGCATTTATATGAGCGTTCGC 58.782 45.455 9.24 9.24 33.37 4.70
5803 6377 2.096958 TGCATTTATATGAGCGTTCGCG 60.097 45.455 11.40 0.00 37.54 5.87
5804 6378 2.096909 GCATTTATATGAGCGTTCGCGT 60.097 45.455 5.77 5.04 37.12 6.01
5805 6379 3.603857 GCATTTATATGAGCGTTCGCGTT 60.604 43.478 5.77 3.64 37.12 4.84
5806 6380 4.514506 CATTTATATGAGCGTTCGCGTTT 58.485 39.130 5.77 3.31 37.12 3.60
5807 6381 3.562781 TTATATGAGCGTTCGCGTTTG 57.437 42.857 5.77 0.00 43.62 2.93
5808 6382 1.355971 ATATGAGCGTTCGCGTTTGT 58.644 45.000 5.77 0.00 43.62 2.83
5809 6383 1.979897 TATGAGCGTTCGCGTTTGTA 58.020 45.000 5.77 0.33 43.62 2.41
5810 6384 1.355971 ATGAGCGTTCGCGTTTGTAT 58.644 45.000 5.77 0.00 43.62 2.29
5811 6385 1.141645 TGAGCGTTCGCGTTTGTATT 58.858 45.000 5.77 0.00 43.62 1.89
5812 6386 1.136474 TGAGCGTTCGCGTTTGTATTG 60.136 47.619 5.77 0.00 43.62 1.90
5813 6387 0.863144 AGCGTTCGCGTTTGTATTGT 59.137 45.000 5.77 0.00 43.62 2.71
5814 6388 2.060284 AGCGTTCGCGTTTGTATTGTA 58.940 42.857 5.77 0.00 43.62 2.41
5815 6389 2.669434 AGCGTTCGCGTTTGTATTGTAT 59.331 40.909 5.77 0.00 43.62 2.29
5816 6390 3.123959 AGCGTTCGCGTTTGTATTGTATT 59.876 39.130 5.77 0.00 43.62 1.89
5817 6391 4.326817 AGCGTTCGCGTTTGTATTGTATTA 59.673 37.500 5.77 0.00 43.62 0.98
5818 6392 4.658723 GCGTTCGCGTTTGTATTGTATTAG 59.341 41.667 5.77 0.00 43.62 1.73
5819 6393 5.499017 GCGTTCGCGTTTGTATTGTATTAGA 60.499 40.000 5.77 0.00 43.62 2.10
5820 6394 6.460158 CGTTCGCGTTTGTATTGTATTAGAA 58.540 36.000 5.77 0.00 35.57 2.10
5821 6395 6.949327 CGTTCGCGTTTGTATTGTATTAGAAA 59.051 34.615 5.77 0.00 35.57 2.52
5822 6396 7.474948 CGTTCGCGTTTGTATTGTATTAGAAAA 59.525 33.333 5.77 0.00 35.57 2.29
5823 6397 9.105206 GTTCGCGTTTGTATTGTATTAGAAAAA 57.895 29.630 5.77 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 0.889186 AGGCATGGTTGGTGTTCGAC 60.889 55.000 0.00 0.00 0.00 4.20
29 30 0.605319 GAGGCATGGTTGGTGTTCGA 60.605 55.000 0.00 0.00 0.00 3.71
32 33 2.268076 GCGAGGCATGGTTGGTGTT 61.268 57.895 0.00 0.00 0.00 3.32
66 67 2.806244 GAGACTTGAAGCACCGCTAAAA 59.194 45.455 0.00 0.00 38.25 1.52
82 88 2.461300 TGCTATAGCCCACAGAGACT 57.539 50.000 21.84 0.00 41.18 3.24
87 93 3.990092 TCGTATTTGCTATAGCCCACAG 58.010 45.455 21.84 9.16 41.18 3.66
88 94 4.314961 CATCGTATTTGCTATAGCCCACA 58.685 43.478 21.84 0.00 41.18 4.17
108 114 2.386935 GGGTCCAAGCCCTAGCCAT 61.387 63.158 0.00 0.00 45.22 4.40
123 129 0.563672 TTTAGGCTGGGTTTTGGGGT 59.436 50.000 0.00 0.00 0.00 4.95
128 134 4.397919 ACTATGGTTTAGGCTGGGTTTT 57.602 40.909 0.00 0.00 0.00 2.43
153 159 8.732746 AGTAGTAGTTCTGCTCAAAAGAAAAA 57.267 30.769 0.00 0.00 34.04 1.94
166 172 4.469945 TGAAATGGGGGAGTAGTAGTTCTG 59.530 45.833 0.00 0.00 0.00 3.02
179 185 3.253188 CGCACTACATTATGAAATGGGGG 59.747 47.826 0.00 0.00 45.72 5.40
182 188 3.565482 AGGCGCACTACATTATGAAATGG 59.435 43.478 10.83 0.00 45.72 3.16
183 189 4.818534 AGGCGCACTACATTATGAAATG 57.181 40.909 10.83 0.00 46.66 2.32
187 193 5.977489 AGTATAGGCGCACTACATTATGA 57.023 39.130 10.83 0.00 33.70 2.15
204 210 8.932791 GGTCAAAGTTGAATCTCGAAAAGTATA 58.067 33.333 0.00 0.00 39.21 1.47
208 214 6.060028 TGGTCAAAGTTGAATCTCGAAAAG 57.940 37.500 0.00 0.00 39.21 2.27
220 226 6.573664 TGGTCTGATTTATGGTCAAAGTTG 57.426 37.500 0.00 0.00 0.00 3.16
294 300 7.222031 TGACAGATACCTTTGAATTCGTATTCG 59.778 37.037 9.79 0.00 42.55 3.34
297 303 7.657761 GGATGACAGATACCTTTGAATTCGTAT 59.342 37.037 0.04 2.45 0.00 3.06
298 304 6.984474 GGATGACAGATACCTTTGAATTCGTA 59.016 38.462 0.04 0.00 0.00 3.43
299 305 5.817816 GGATGACAGATACCTTTGAATTCGT 59.182 40.000 0.04 0.00 0.00 3.85
314 320 2.725312 GCAGCGGGAGGATGACAGA 61.725 63.158 0.00 0.00 32.47 3.41
325 331 3.950794 TTAAGGCGACTGCAGCGGG 62.951 63.158 24.76 12.38 45.35 6.13
330 336 4.013728 ACCATAAATTTAAGGCGACTGCA 58.986 39.130 17.37 0.00 45.35 4.41
366 380 2.058057 GTAATGCACCAACGCTTTTGG 58.942 47.619 11.45 11.45 44.91 3.28
376 390 2.824936 CTCCCACAAATGTAATGCACCA 59.175 45.455 0.00 0.00 0.00 4.17
378 392 3.367292 CCACTCCCACAAATGTAATGCAC 60.367 47.826 0.00 0.00 0.00 4.57
379 393 2.824936 CCACTCCCACAAATGTAATGCA 59.175 45.455 0.00 0.00 0.00 3.96
410 424 4.949966 TGATCCTATACTAGTCTCCCCC 57.050 50.000 0.00 0.00 0.00 5.40
411 425 5.018149 GGTTGATCCTATACTAGTCTCCCC 58.982 50.000 0.00 0.00 0.00 4.81
412 426 5.018149 GGGTTGATCCTATACTAGTCTCCC 58.982 50.000 0.00 0.00 36.25 4.30
413 427 5.642165 TGGGTTGATCCTATACTAGTCTCC 58.358 45.833 0.00 0.00 36.25 3.71
414 428 7.069578 TGTTTGGGTTGATCCTATACTAGTCTC 59.930 40.741 0.00 0.00 36.25 3.36
415 429 6.901300 TGTTTGGGTTGATCCTATACTAGTCT 59.099 38.462 0.00 0.00 36.25 3.24
416 430 7.120923 TGTTTGGGTTGATCCTATACTAGTC 57.879 40.000 0.00 0.00 36.25 2.59
417 431 7.691993 ATGTTTGGGTTGATCCTATACTAGT 57.308 36.000 0.00 0.00 36.25 2.57
418 432 8.980481 AAATGTTTGGGTTGATCCTATACTAG 57.020 34.615 0.00 0.00 36.25 2.57
419 433 8.553153 TGAAATGTTTGGGTTGATCCTATACTA 58.447 33.333 0.00 0.00 36.25 1.82
420 434 7.410174 TGAAATGTTTGGGTTGATCCTATACT 58.590 34.615 0.00 0.00 36.25 2.12
421 435 7.639113 TGAAATGTTTGGGTTGATCCTATAC 57.361 36.000 0.00 0.00 36.25 1.47
423 437 9.438163 AATATGAAATGTTTGGGTTGATCCTAT 57.562 29.630 0.00 0.00 36.25 2.57
424 438 8.837099 AATATGAAATGTTTGGGTTGATCCTA 57.163 30.769 0.00 0.00 36.25 2.94
425 439 7.738437 AATATGAAATGTTTGGGTTGATCCT 57.262 32.000 0.00 0.00 36.25 3.24
426 440 9.533253 CTAAATATGAAATGTTTGGGTTGATCC 57.467 33.333 0.00 0.00 38.17 3.36
429 443 9.083422 TGTCTAAATATGAAATGTTTGGGTTGA 57.917 29.630 0.00 0.00 38.17 3.18
430 444 9.703892 TTGTCTAAATATGAAATGTTTGGGTTG 57.296 29.630 0.00 0.00 38.17 3.77
433 447 9.533253 GGATTGTCTAAATATGAAATGTTTGGG 57.467 33.333 0.00 0.00 38.17 4.12
490 504 1.480954 AGTTATAGACACACCCCGCAG 59.519 52.381 0.00 0.00 0.00 5.18
491 505 1.563924 AGTTATAGACACACCCCGCA 58.436 50.000 0.00 0.00 0.00 5.69
492 506 2.428171 TGTAGTTATAGACACACCCCGC 59.572 50.000 0.00 0.00 0.00 6.13
493 507 4.724074 TTGTAGTTATAGACACACCCCG 57.276 45.455 0.00 0.00 0.00 5.73
494 508 7.107542 TCATTTTGTAGTTATAGACACACCCC 58.892 38.462 0.00 0.00 0.00 4.95
495 509 8.556213 TTCATTTTGTAGTTATAGACACACCC 57.444 34.615 0.00 0.00 0.00 4.61
507 521 9.034544 GTTTTGAGCTGAATTCATTTTGTAGTT 57.965 29.630 8.96 0.00 0.00 2.24
508 522 8.416329 AGTTTTGAGCTGAATTCATTTTGTAGT 58.584 29.630 8.96 0.00 0.00 2.73
509 523 8.807667 AGTTTTGAGCTGAATTCATTTTGTAG 57.192 30.769 8.96 0.00 0.00 2.74
510 524 7.591057 CGAGTTTTGAGCTGAATTCATTTTGTA 59.409 33.333 8.96 0.00 0.00 2.41
511 525 6.418819 CGAGTTTTGAGCTGAATTCATTTTGT 59.581 34.615 8.96 0.00 0.00 2.83
512 526 6.638063 TCGAGTTTTGAGCTGAATTCATTTTG 59.362 34.615 8.96 0.00 0.00 2.44
513 527 6.738114 TCGAGTTTTGAGCTGAATTCATTTT 58.262 32.000 8.96 0.00 0.00 1.82
514 528 6.317789 TCGAGTTTTGAGCTGAATTCATTT 57.682 33.333 8.96 0.00 0.00 2.32
515 529 5.947228 TCGAGTTTTGAGCTGAATTCATT 57.053 34.783 8.96 0.07 0.00 2.57
516 530 5.879223 AGATCGAGTTTTGAGCTGAATTCAT 59.121 36.000 8.96 0.00 29.49 2.57
517 531 5.240891 AGATCGAGTTTTGAGCTGAATTCA 58.759 37.500 8.12 8.12 29.49 2.57
518 532 5.793026 AGATCGAGTTTTGAGCTGAATTC 57.207 39.130 0.00 0.00 29.49 2.17
519 533 6.166279 TGTAGATCGAGTTTTGAGCTGAATT 58.834 36.000 0.00 0.00 33.49 2.17
520 534 5.724328 TGTAGATCGAGTTTTGAGCTGAAT 58.276 37.500 0.00 0.00 33.49 2.57
521 535 5.134202 TGTAGATCGAGTTTTGAGCTGAA 57.866 39.130 0.00 0.00 33.49 3.02
522 536 4.218635 ACTGTAGATCGAGTTTTGAGCTGA 59.781 41.667 0.00 0.00 33.49 4.26
523 537 4.489810 ACTGTAGATCGAGTTTTGAGCTG 58.510 43.478 0.00 0.00 33.49 4.24
524 538 4.792521 ACTGTAGATCGAGTTTTGAGCT 57.207 40.909 0.00 0.00 35.94 4.09
525 539 6.323266 TCTAACTGTAGATCGAGTTTTGAGC 58.677 40.000 11.51 0.00 34.28 4.26
526 540 7.753659 TCTCTAACTGTAGATCGAGTTTTGAG 58.246 38.462 18.57 18.57 35.76 3.02
527 541 7.683437 TCTCTAACTGTAGATCGAGTTTTGA 57.317 36.000 11.51 9.87 35.76 2.69
528 542 8.918961 AATCTCTAACTGTAGATCGAGTTTTG 57.081 34.615 11.51 7.13 35.76 2.44
529 543 8.962679 AGAATCTCTAACTGTAGATCGAGTTTT 58.037 33.333 11.51 2.56 35.76 2.43
530 544 8.514330 AGAATCTCTAACTGTAGATCGAGTTT 57.486 34.615 11.51 1.19 35.76 2.66
531 545 9.616156 TTAGAATCTCTAACTGTAGATCGAGTT 57.384 33.333 11.15 11.15 34.30 3.01
532 546 9.616156 TTTAGAATCTCTAACTGTAGATCGAGT 57.384 33.333 0.00 0.00 38.56 4.18
560 574 9.725019 TCACACTATTCATAGTCAAATTTGTCT 57.275 29.630 19.40 19.40 41.44 3.41
561 575 9.979270 CTCACACTATTCATAGTCAAATTTGTC 57.021 33.333 17.47 12.30 41.44 3.18
562 576 8.454106 GCTCACACTATTCATAGTCAAATTTGT 58.546 33.333 17.47 2.40 41.44 2.83
563 577 8.671921 AGCTCACACTATTCATAGTCAAATTTG 58.328 33.333 12.15 12.15 41.44 2.32
564 578 8.798859 AGCTCACACTATTCATAGTCAAATTT 57.201 30.769 0.00 0.00 41.44 1.82
565 579 8.798859 AAGCTCACACTATTCATAGTCAAATT 57.201 30.769 0.00 0.00 41.44 1.82
566 580 8.798859 AAAGCTCACACTATTCATAGTCAAAT 57.201 30.769 0.00 0.00 41.44 2.32
567 581 8.506437 CAAAAGCTCACACTATTCATAGTCAAA 58.494 33.333 0.00 0.00 41.44 2.69
568 582 7.119699 CCAAAAGCTCACACTATTCATAGTCAA 59.880 37.037 0.00 0.00 41.44 3.18
569 583 6.595326 CCAAAAGCTCACACTATTCATAGTCA 59.405 38.462 0.00 0.00 41.44 3.41
570 584 6.037610 CCCAAAAGCTCACACTATTCATAGTC 59.962 42.308 0.00 0.00 41.44 2.59
571 585 5.882557 CCCAAAAGCTCACACTATTCATAGT 59.117 40.000 0.00 0.00 44.03 2.12
572 586 5.220931 GCCCAAAAGCTCACACTATTCATAG 60.221 44.000 0.00 0.00 36.46 2.23
573 587 4.640201 GCCCAAAAGCTCACACTATTCATA 59.360 41.667 0.00 0.00 0.00 2.15
574 588 3.445096 GCCCAAAAGCTCACACTATTCAT 59.555 43.478 0.00 0.00 0.00 2.57
575 589 2.819608 GCCCAAAAGCTCACACTATTCA 59.180 45.455 0.00 0.00 0.00 2.57
576 590 2.159517 CGCCCAAAAGCTCACACTATTC 60.160 50.000 0.00 0.00 0.00 1.75
577 591 1.812571 CGCCCAAAAGCTCACACTATT 59.187 47.619 0.00 0.00 0.00 1.73
578 592 1.003118 TCGCCCAAAAGCTCACACTAT 59.997 47.619 0.00 0.00 0.00 2.12
579 593 0.394938 TCGCCCAAAAGCTCACACTA 59.605 50.000 0.00 0.00 0.00 2.74
580 594 0.465460 TTCGCCCAAAAGCTCACACT 60.465 50.000 0.00 0.00 0.00 3.55
581 595 0.598065 ATTCGCCCAAAAGCTCACAC 59.402 50.000 0.00 0.00 0.00 3.82
582 596 2.192664 TATTCGCCCAAAAGCTCACA 57.807 45.000 0.00 0.00 0.00 3.58
583 597 3.782889 AATATTCGCCCAAAAGCTCAC 57.217 42.857 0.00 0.00 0.00 3.51
584 598 6.096141 TCAAATAATATTCGCCCAAAAGCTCA 59.904 34.615 0.00 0.00 0.00 4.26
585 599 6.417930 GTCAAATAATATTCGCCCAAAAGCTC 59.582 38.462 0.00 0.00 0.00 4.09
586 600 6.127479 TGTCAAATAATATTCGCCCAAAAGCT 60.127 34.615 0.00 0.00 0.00 3.74
587 601 6.019881 GTGTCAAATAATATTCGCCCAAAAGC 60.020 38.462 0.00 0.00 0.00 3.51
588 602 7.257722 AGTGTCAAATAATATTCGCCCAAAAG 58.742 34.615 0.00 0.00 0.00 2.27
589 603 7.164230 AGTGTCAAATAATATTCGCCCAAAA 57.836 32.000 0.00 0.00 0.00 2.44
590 604 6.767524 AGTGTCAAATAATATTCGCCCAAA 57.232 33.333 0.00 0.00 0.00 3.28
591 605 8.458573 AATAGTGTCAAATAATATTCGCCCAA 57.541 30.769 0.00 0.00 0.00 4.12
592 606 7.717436 TGAATAGTGTCAAATAATATTCGCCCA 59.283 33.333 0.00 0.00 36.22 5.36
593 607 8.015658 GTGAATAGTGTCAAATAATATTCGCCC 58.984 37.037 0.00 0.00 37.37 6.13
594 608 8.556194 TGTGAATAGTGTCAAATAATATTCGCC 58.444 33.333 12.94 3.57 40.27 5.54
604 618 9.017509 ACAAATCAGATGTGAATAGTGTCAAAT 57.982 29.630 7.66 0.00 35.88 2.32
605 619 8.394971 ACAAATCAGATGTGAATAGTGTCAAA 57.605 30.769 7.66 0.00 35.88 2.69
606 620 7.879677 AGACAAATCAGATGTGAATAGTGTCAA 59.120 33.333 20.58 0.00 36.48 3.18
607 621 7.389232 AGACAAATCAGATGTGAATAGTGTCA 58.611 34.615 20.58 0.00 36.48 3.58
608 622 7.840342 AGACAAATCAGATGTGAATAGTGTC 57.160 36.000 7.66 15.10 35.88 3.67
609 623 8.627208 AAAGACAAATCAGATGTGAATAGTGT 57.373 30.769 7.66 0.00 35.88 3.55
610 624 9.903682 AAAAAGACAAATCAGATGTGAATAGTG 57.096 29.630 7.66 0.00 35.88 2.74
633 647 6.766944 TCGAACTACACTTATTGGACCAAAAA 59.233 34.615 11.82 0.00 0.00 1.94
634 648 6.289834 TCGAACTACACTTATTGGACCAAAA 58.710 36.000 11.82 6.36 0.00 2.44
635 649 5.856156 TCGAACTACACTTATTGGACCAAA 58.144 37.500 11.82 0.00 0.00 3.28
636 650 5.471556 TCGAACTACACTTATTGGACCAA 57.528 39.130 9.92 9.92 0.00 3.67
637 651 5.471556 TTCGAACTACACTTATTGGACCA 57.528 39.130 0.00 0.00 0.00 4.02
638 652 6.980051 AATTCGAACTACACTTATTGGACC 57.020 37.500 0.00 0.00 0.00 4.46
639 653 7.977853 TCCTAATTCGAACTACACTTATTGGAC 59.022 37.037 0.00 0.00 0.00 4.02
640 654 8.070034 TCCTAATTCGAACTACACTTATTGGA 57.930 34.615 0.00 0.00 0.00 3.53
641 655 7.042658 GCTCCTAATTCGAACTACACTTATTGG 60.043 40.741 0.00 0.00 0.00 3.16
642 656 7.707035 AGCTCCTAATTCGAACTACACTTATTG 59.293 37.037 0.00 0.00 0.00 1.90
643 657 7.707035 CAGCTCCTAATTCGAACTACACTTATT 59.293 37.037 0.00 0.00 0.00 1.40
644 658 7.068348 TCAGCTCCTAATTCGAACTACACTTAT 59.932 37.037 0.00 0.00 0.00 1.73
645 659 6.376299 TCAGCTCCTAATTCGAACTACACTTA 59.624 38.462 0.00 0.00 0.00 2.24
646 660 5.185249 TCAGCTCCTAATTCGAACTACACTT 59.815 40.000 0.00 0.00 0.00 3.16
647 661 4.705507 TCAGCTCCTAATTCGAACTACACT 59.294 41.667 0.00 0.00 0.00 3.55
648 662 4.995124 TCAGCTCCTAATTCGAACTACAC 58.005 43.478 0.00 0.00 0.00 2.90
649 663 5.654603 TTCAGCTCCTAATTCGAACTACA 57.345 39.130 0.00 0.00 0.00 2.74
650 664 6.100668 AGTTTCAGCTCCTAATTCGAACTAC 58.899 40.000 0.00 0.00 0.00 2.73
651 665 6.282199 AGTTTCAGCTCCTAATTCGAACTA 57.718 37.500 0.00 0.00 0.00 2.24
652 666 5.153950 AGTTTCAGCTCCTAATTCGAACT 57.846 39.130 0.00 0.00 0.00 3.01
653 667 5.864628 AAGTTTCAGCTCCTAATTCGAAC 57.135 39.130 0.00 0.00 0.00 3.95
654 668 6.877611 AAAAGTTTCAGCTCCTAATTCGAA 57.122 33.333 0.00 0.00 0.00 3.71
655 669 6.485313 TCAAAAAGTTTCAGCTCCTAATTCGA 59.515 34.615 0.00 0.00 0.00 3.71
656 670 6.668323 TCAAAAAGTTTCAGCTCCTAATTCG 58.332 36.000 0.00 0.00 0.00 3.34
657 671 6.584184 GCTCAAAAAGTTTCAGCTCCTAATTC 59.416 38.462 6.83 0.00 0.00 2.17
658 672 6.266330 AGCTCAAAAAGTTTCAGCTCCTAATT 59.734 34.615 9.73 0.00 35.46 1.40
659 673 5.772169 AGCTCAAAAAGTTTCAGCTCCTAAT 59.228 36.000 9.73 0.00 35.46 1.73
660 674 5.133221 AGCTCAAAAAGTTTCAGCTCCTAA 58.867 37.500 9.73 0.00 35.46 2.69
661 675 4.718961 AGCTCAAAAAGTTTCAGCTCCTA 58.281 39.130 9.73 0.00 35.46 2.94
662 676 3.560105 AGCTCAAAAAGTTTCAGCTCCT 58.440 40.909 9.73 0.00 35.46 3.69
663 677 3.998099 AGCTCAAAAAGTTTCAGCTCC 57.002 42.857 9.73 0.00 35.46 4.70
664 678 4.676546 ACAAGCTCAAAAAGTTTCAGCTC 58.323 39.130 14.03 0.00 39.57 4.09
665 679 4.725790 ACAAGCTCAAAAAGTTTCAGCT 57.274 36.364 9.73 9.73 42.34 4.24
666 680 5.339990 TGTACAAGCTCAAAAAGTTTCAGC 58.660 37.500 0.00 6.19 0.00 4.26
667 681 7.166473 GTGATGTACAAGCTCAAAAAGTTTCAG 59.834 37.037 0.00 0.00 0.00 3.02
668 682 6.972328 GTGATGTACAAGCTCAAAAAGTTTCA 59.028 34.615 0.00 0.00 0.00 2.69
669 683 6.972328 TGTGATGTACAAGCTCAAAAAGTTTC 59.028 34.615 0.00 0.00 36.06 2.78
670 684 6.751888 GTGTGATGTACAAGCTCAAAAAGTTT 59.248 34.615 0.00 0.00 41.89 2.66
671 685 6.127758 TGTGTGATGTACAAGCTCAAAAAGTT 60.128 34.615 0.00 0.00 41.89 2.66
672 686 5.356751 TGTGTGATGTACAAGCTCAAAAAGT 59.643 36.000 0.00 0.00 41.89 2.66
673 687 5.820131 TGTGTGATGTACAAGCTCAAAAAG 58.180 37.500 0.00 0.00 41.89 2.27
674 688 5.826601 TGTGTGATGTACAAGCTCAAAAA 57.173 34.783 0.00 0.00 41.89 1.94
675 689 5.530543 TCATGTGTGATGTACAAGCTCAAAA 59.469 36.000 0.00 0.00 41.89 2.44
676 690 5.062528 TCATGTGTGATGTACAAGCTCAAA 58.937 37.500 0.00 0.00 41.89 2.69
677 691 4.640364 TCATGTGTGATGTACAAGCTCAA 58.360 39.130 0.00 0.00 41.89 3.02
678 692 4.270245 TCATGTGTGATGTACAAGCTCA 57.730 40.909 0.00 0.00 41.89 4.26
679 693 5.122869 ACATTCATGTGTGATGTACAAGCTC 59.877 40.000 0.00 0.00 41.89 4.09
680 694 5.005740 ACATTCATGTGTGATGTACAAGCT 58.994 37.500 0.00 0.00 41.89 3.74
681 695 5.300969 ACATTCATGTGTGATGTACAAGC 57.699 39.130 0.00 0.00 41.89 4.01
694 708 6.409524 AAAATTGGAGACACACATTCATGT 57.590 33.333 0.00 0.00 42.67 3.21
760 774 9.152327 TCTATTCTTAGGTGAGATCAATGTGAT 57.848 33.333 0.00 0.00 40.34 3.06
761 775 8.539117 TCTATTCTTAGGTGAGATCAATGTGA 57.461 34.615 0.00 0.00 0.00 3.58
762 776 9.421806 GATCTATTCTTAGGTGAGATCAATGTG 57.578 37.037 0.00 0.00 41.37 3.21
763 777 9.378504 AGATCTATTCTTAGGTGAGATCAATGT 57.621 33.333 15.29 0.00 43.25 2.71
783 797 9.310449 GTGGGGAAGACTTGTATATAAGATCTA 57.690 37.037 15.37 0.00 0.00 1.98
784 798 7.789831 TGTGGGGAAGACTTGTATATAAGATCT 59.210 37.037 15.37 10.97 0.00 2.75
785 799 7.963532 TGTGGGGAAGACTTGTATATAAGATC 58.036 38.462 15.37 9.19 0.00 2.75
786 800 7.931015 TGTGGGGAAGACTTGTATATAAGAT 57.069 36.000 15.37 1.79 0.00 2.40
787 801 7.931015 ATGTGGGGAAGACTTGTATATAAGA 57.069 36.000 15.37 0.00 0.00 2.10
788 802 8.840321 CAAATGTGGGGAAGACTTGTATATAAG 58.160 37.037 7.62 7.62 0.00 1.73
789 803 8.333235 ACAAATGTGGGGAAGACTTGTATATAA 58.667 33.333 0.00 0.00 0.00 0.98
790 804 7.773224 CACAAATGTGGGGAAGACTTGTATATA 59.227 37.037 5.63 0.00 42.10 0.86
791 805 6.603201 CACAAATGTGGGGAAGACTTGTATAT 59.397 38.462 5.63 0.00 42.10 0.86
792 806 5.943416 CACAAATGTGGGGAAGACTTGTATA 59.057 40.000 5.63 0.00 42.10 1.47
793 807 4.766891 CACAAATGTGGGGAAGACTTGTAT 59.233 41.667 5.63 0.00 42.10 2.29
794 808 4.141287 CACAAATGTGGGGAAGACTTGTA 58.859 43.478 5.63 0.00 42.10 2.41
795 809 2.958355 CACAAATGTGGGGAAGACTTGT 59.042 45.455 5.63 0.00 42.10 3.16
796 810 3.648339 CACAAATGTGGGGAAGACTTG 57.352 47.619 5.63 0.00 42.10 3.16
807 821 2.305927 ACCTACTCCCTCCACAAATGTG 59.694 50.000 6.57 6.57 45.23 3.21
808 822 2.572104 GACCTACTCCCTCCACAAATGT 59.428 50.000 0.00 0.00 0.00 2.71
809 823 2.092914 GGACCTACTCCCTCCACAAATG 60.093 54.545 0.00 0.00 31.83 2.32
810 824 2.197465 GGACCTACTCCCTCCACAAAT 58.803 52.381 0.00 0.00 31.83 2.32
811 825 1.652947 GGACCTACTCCCTCCACAAA 58.347 55.000 0.00 0.00 31.83 2.83
812 826 3.393854 GGACCTACTCCCTCCACAA 57.606 57.895 0.00 0.00 31.83 3.33
842 856 1.541310 CGAGGCCTGGTTGGTGTCTA 61.541 60.000 12.00 0.00 38.35 2.59
1155 1170 4.309950 ACGTGGAGGTTGCCGGTC 62.310 66.667 1.90 0.00 0.00 4.79
1340 1355 1.338769 GGCCGAAATGTAGGTGACAGT 60.339 52.381 0.00 0.00 42.79 3.55
1342 1357 0.981183 AGGCCGAAATGTAGGTGACA 59.019 50.000 0.00 0.00 43.97 3.58
1354 1369 1.002773 GAAGAACCCTAACAGGCCGAA 59.997 52.381 0.00 0.00 32.73 4.30
1357 1372 1.628846 TCAGAAGAACCCTAACAGGCC 59.371 52.381 0.00 0.00 32.73 5.19
1364 1379 2.537143 GGTCACCTCAGAAGAACCCTA 58.463 52.381 0.00 0.00 0.00 3.53
1379 1394 3.057174 GTCATCAGATATCCCTCGGTCAC 60.057 52.174 0.00 0.00 0.00 3.67
1388 1403 8.402798 TCTTGAACTCTAGTCATCAGATATCC 57.597 38.462 0.00 0.00 0.00 2.59
1414 1429 3.557595 CACAATCCAGAGTAGGAATTCGC 59.442 47.826 0.00 0.00 41.92 4.70
1466 1481 1.890876 AAGCAACTACACCATCGCAA 58.109 45.000 0.00 0.00 0.00 4.85
1512 1527 6.663953 TGCAGGTAACAGATTCTACTCTAGTT 59.336 38.462 0.00 0.00 41.41 2.24
1547 1566 4.838986 ACCTAAACAGGTACACAGATGAGT 59.161 41.667 0.00 0.00 41.04 3.41
1642 1661 2.012673 GCACCAGACTCCATTAGCTTG 58.987 52.381 0.00 0.00 0.00 4.01
1690 1709 3.272285 TCAGGAGAGGGGAGAAAGATACA 59.728 47.826 0.00 0.00 0.00 2.29
1724 1744 6.635030 AAACTTAAGTTTCACTAAGCAGGG 57.365 37.500 24.66 0.00 44.15 4.45
1740 1760 4.891168 GGAACTTGGAACCAGGAAACTTAA 59.109 41.667 9.85 0.00 40.21 1.85
1742 1762 3.296854 GGAACTTGGAACCAGGAAACTT 58.703 45.455 9.85 0.00 40.21 2.66
1885 1911 8.345565 GTCATGGTAGGATGTCACATTTAATTC 58.654 37.037 0.00 0.00 0.00 2.17
1919 1949 7.380870 TGTTCACCGTGTTTTAAATGATTCATG 59.619 33.333 0.00 0.00 0.00 3.07
1924 1954 8.547069 CAAATTGTTCACCGTGTTTTAAATGAT 58.453 29.630 0.00 0.00 0.00 2.45
1936 1966 1.616159 CCCCTCAAATTGTTCACCGT 58.384 50.000 0.00 0.00 0.00 4.83
1955 1985 5.490213 CCATGAGTTTACTCGAAATAACGC 58.510 41.667 5.50 0.00 45.72 4.84
1979 2011 2.802816 CGAATATTACAGACAGGCCAGC 59.197 50.000 5.01 0.00 0.00 4.85
2000 2032 7.861372 TGTTAGACGAGCTACTATTTGATTAGC 59.139 37.037 0.00 0.00 38.85 3.09
2031 2063 4.686972 TCGAGTTCCTGAAGCATCAATAG 58.313 43.478 0.00 0.00 34.49 1.73
2063 2095 5.344743 TCTTCATCCGATTAGCAGTTTCT 57.655 39.130 0.00 0.00 0.00 2.52
2243 2275 3.502211 ACCTGAAAACATAGGCTCAAACG 59.498 43.478 0.00 0.00 37.61 3.60
2272 2320 4.645535 AGAAAGCATAAGAGCAGTTCACA 58.354 39.130 0.00 0.00 34.88 3.58
2401 2449 5.225899 TGCTTCTCATGATCACAAAATCG 57.774 39.130 0.00 0.00 0.00 3.34
2407 2455 2.686405 GCCATTGCTTCTCATGATCACA 59.314 45.455 0.00 0.00 33.53 3.58
2520 2569 3.198068 GCGCCAGATGATCAGAAGTAAA 58.802 45.455 0.09 0.00 0.00 2.01
2648 2742 4.035208 ACACATTTCGAAGGTCAAGACAAC 59.965 41.667 0.00 0.00 0.00 3.32
2650 2744 3.559655 CACACATTTCGAAGGTCAAGACA 59.440 43.478 0.00 0.00 0.00 3.41
2728 2822 0.108945 GCAAATCCAAGAGCCTGCAC 60.109 55.000 0.00 0.00 0.00 4.57
2826 2920 1.153429 GCTAGTTACCTGCCCCACG 60.153 63.158 0.00 0.00 0.00 4.94
2881 2975 5.764686 AGAATGCAGTTTGACAGTCACATAA 59.235 36.000 1.52 0.00 33.50 1.90
2957 3053 8.868522 AAATATGTCCAGAGAAGATGTGAAAA 57.131 30.769 0.00 0.00 0.00 2.29
3081 3182 4.748144 CCCCAGCCCAAGAGTGCC 62.748 72.222 0.00 0.00 0.00 5.01
3166 3270 5.701224 AGGTCCTTATGTTCTTCAAAACCA 58.299 37.500 0.00 0.00 0.00 3.67
3176 3280 9.974980 TTGATAAAACAAAAGGTCCTTATGTTC 57.025 29.630 4.04 0.00 33.39 3.18
3355 3460 4.684242 CAGTGAAGCACGTATACAACTTCA 59.316 41.667 20.12 20.12 43.18 3.02
3451 3556 6.531503 TCTTCGAAGTCCTTGATGAGTAAT 57.468 37.500 23.85 0.00 0.00 1.89
3544 3649 7.013846 CCCTGGTGTGTACAGAAAAATAGAAAA 59.986 37.037 0.00 0.00 38.20 2.29
3545 3650 6.488683 CCCTGGTGTGTACAGAAAAATAGAAA 59.511 38.462 0.00 0.00 38.20 2.52
3546 3651 6.001460 CCCTGGTGTGTACAGAAAAATAGAA 58.999 40.000 0.00 0.00 38.20 2.10
3547 3652 5.514136 CCCCTGGTGTGTACAGAAAAATAGA 60.514 44.000 0.00 0.00 38.20 1.98
3548 3653 4.700213 CCCCTGGTGTGTACAGAAAAATAG 59.300 45.833 0.00 0.00 38.20 1.73
3549 3654 4.105057 ACCCCTGGTGTGTACAGAAAAATA 59.895 41.667 0.00 0.00 38.20 1.40
3550 3655 3.117284 ACCCCTGGTGTGTACAGAAAAAT 60.117 43.478 0.00 0.00 38.20 1.82
3551 3656 2.242708 ACCCCTGGTGTGTACAGAAAAA 59.757 45.455 0.00 0.00 38.20 1.94
3643 3751 3.066760 GGTGGTTGTGAGAAAGAAACAGG 59.933 47.826 0.00 0.00 27.46 4.00
3680 3788 6.636447 TGTTGATGATTAAGAAGCGTTTTGTG 59.364 34.615 0.00 0.00 0.00 3.33
3750 3867 1.211457 AGCTTCCCAGGATAGCAACTG 59.789 52.381 17.44 0.00 37.37 3.16
3989 4106 5.111293 ACCAAACTCAGTCAAAGCAATTTG 58.889 37.500 0.00 0.00 0.00 2.32
4008 4125 5.912149 ATTGATCAGAATAGGCCTACCAA 57.088 39.130 16.61 10.68 39.06 3.67
4242 4360 4.271590 GGCAACAAAATCAAACCACAAC 57.728 40.909 0.00 0.00 0.00 3.32
4273 4391 0.770557 ACAGCCCAGGAACAACCCTA 60.771 55.000 0.00 0.00 40.05 3.53
4343 4461 2.611292 GCATGTATCTGTTGAGGCAGTC 59.389 50.000 0.00 0.00 37.70 3.51
4428 4546 7.287927 TCTCTCTAGTTATCATGGTTTAGGTGG 59.712 40.741 0.00 0.00 0.00 4.61
4545 4663 1.555967 TGGCCAGGAAAAGCATTACC 58.444 50.000 0.00 0.00 0.00 2.85
4546 4664 5.534654 TGTATATGGCCAGGAAAAGCATTAC 59.465 40.000 13.05 0.22 0.00 1.89
4590 4708 9.418045 ACAGGTTAATACAAAAATACAATGTGC 57.582 29.630 0.00 0.00 0.00 4.57
4631 4749 4.894114 AGTACTCGGAGTGGCATAAATAGT 59.106 41.667 20.58 0.00 0.00 2.12
4652 4770 0.250338 GAAGCTTCCCGGTCAACAGT 60.250 55.000 15.97 0.00 0.00 3.55
4826 4944 2.941210 GGGAACGGCAGATTCAACA 58.059 52.632 0.00 0.00 0.00 3.33
4858 4976 6.780031 TGATTGTTCTGGATTCCCTACAAAAA 59.220 34.615 14.47 6.86 34.85 1.94
4894 5012 5.695851 AAAAGTAACAAGCCATCACTCAG 57.304 39.130 0.00 0.00 0.00 3.35
4932 5051 7.342799 AGCACATACCCTCAAAATTCATTACAT 59.657 33.333 0.00 0.00 0.00 2.29
4950 5069 2.636830 ACAGCAAGATGGAGCACATAC 58.363 47.619 0.00 0.00 40.72 2.39
5017 5136 6.256539 CGTACATCTTACTAGACGTGTCCTAA 59.743 42.308 0.00 0.00 31.99 2.69
5130 5251 8.958119 AAAGAACATGGCGTAGAAAATATCTA 57.042 30.769 0.00 0.00 39.71 1.98
5135 5256 7.696453 CGAATAAAAGAACATGGCGTAGAAAAT 59.304 33.333 0.00 0.00 0.00 1.82
5220 5749 9.657121 CTCGAGAGGCATTTTCTATTTTATTTC 57.343 33.333 6.58 0.00 0.00 2.17
5231 5760 3.997021 TCAAGAACTCGAGAGGCATTTTC 59.003 43.478 21.68 10.42 0.00 2.29
5232 5761 4.008074 TCAAGAACTCGAGAGGCATTTT 57.992 40.909 21.68 0.00 0.00 1.82
5236 5765 1.895798 ACATCAAGAACTCGAGAGGCA 59.104 47.619 21.68 0.00 0.00 4.75
5251 5781 6.403527 CGAAGATGCATTTTTCAGGTACATCA 60.404 38.462 18.95 0.00 35.91 3.07
5261 5791 6.991485 TTTCAGTTCGAAGATGCATTTTTC 57.009 33.333 0.00 7.68 35.04 2.29
5290 5823 8.842280 TCAAATGAACTAAATTTGTAACGGAGT 58.158 29.630 0.00 0.00 43.18 3.85
5322 5858 6.094048 CCTCCATTCTAAATAAGTGTGTGGTG 59.906 42.308 0.00 0.00 0.00 4.17
5487 6056 9.515226 ACAGTAATTCTCTTGTTATGGCTAAAA 57.485 29.630 0.00 0.00 0.00 1.52
5529 6098 0.108396 GGCTGCCCAAAACAAATGGT 59.892 50.000 7.66 0.00 36.14 3.55
5532 6101 3.295585 AAAAGGCTGCCCAAAACAAAT 57.704 38.095 16.57 0.00 0.00 2.32
5561 6130 5.334802 CGCTGACTAAAACAATCCATCACAA 60.335 40.000 0.00 0.00 0.00 3.33
5562 6131 4.154015 CGCTGACTAAAACAATCCATCACA 59.846 41.667 0.00 0.00 0.00 3.58
5563 6132 4.154195 ACGCTGACTAAAACAATCCATCAC 59.846 41.667 0.00 0.00 0.00 3.06
5564 6133 4.323417 ACGCTGACTAAAACAATCCATCA 58.677 39.130 0.00 0.00 0.00 3.07
5569 6138 4.483476 ACCAACGCTGACTAAAACAATC 57.517 40.909 0.00 0.00 0.00 2.67
5571 6140 3.249080 GCTACCAACGCTGACTAAAACAA 59.751 43.478 0.00 0.00 0.00 2.83
5578 6147 0.391661 CCATGCTACCAACGCTGACT 60.392 55.000 0.00 0.00 0.00 3.41
5580 6149 0.036164 AACCATGCTACCAACGCTGA 59.964 50.000 0.00 0.00 0.00 4.26
5583 6152 0.447801 CTCAACCATGCTACCAACGC 59.552 55.000 0.00 0.00 0.00 4.84
5587 6156 1.951209 TCCTCTCAACCATGCTACCA 58.049 50.000 0.00 0.00 0.00 3.25
5590 6159 6.692849 ATATGAATCCTCTCAACCATGCTA 57.307 37.500 0.00 0.00 0.00 3.49
5601 6170 4.505039 GCGGGTGGTTTATATGAATCCTCT 60.505 45.833 0.00 0.00 0.00 3.69
5602 6171 3.751698 GCGGGTGGTTTATATGAATCCTC 59.248 47.826 0.00 0.00 0.00 3.71
5603 6172 3.137544 TGCGGGTGGTTTATATGAATCCT 59.862 43.478 0.00 0.00 0.00 3.24
5604 6173 3.482436 TGCGGGTGGTTTATATGAATCC 58.518 45.455 0.00 0.00 0.00 3.01
5605 6174 5.508200 TTTGCGGGTGGTTTATATGAATC 57.492 39.130 0.00 0.00 0.00 2.52
5606 6175 5.923733 TTTTGCGGGTGGTTTATATGAAT 57.076 34.783 0.00 0.00 0.00 2.57
5607 6176 5.723672 TTTTTGCGGGTGGTTTATATGAA 57.276 34.783 0.00 0.00 0.00 2.57
5628 6197 9.844257 CTCTGGTTTATATGAATCCTCTCTTTT 57.156 33.333 0.00 0.00 0.00 2.27
5629 6198 7.936301 GCTCTGGTTTATATGAATCCTCTCTTT 59.064 37.037 0.00 0.00 0.00 2.52
5630 6199 7.292120 AGCTCTGGTTTATATGAATCCTCTCTT 59.708 37.037 0.00 0.00 0.00 2.85
5631 6200 6.786959 AGCTCTGGTTTATATGAATCCTCTCT 59.213 38.462 0.00 0.00 0.00 3.10
5632 6201 7.003402 AGCTCTGGTTTATATGAATCCTCTC 57.997 40.000 0.00 0.00 0.00 3.20
5633 6202 7.952930 TCTAGCTCTGGTTTATATGAATCCTCT 59.047 37.037 0.00 0.00 0.00 3.69
5679 6248 5.305585 CACCAAGAAACCAAACTAGAGCTA 58.694 41.667 0.00 0.00 0.00 3.32
5680 6249 4.137543 CACCAAGAAACCAAACTAGAGCT 58.862 43.478 0.00 0.00 0.00 4.09
5681 6250 3.253432 CCACCAAGAAACCAAACTAGAGC 59.747 47.826 0.00 0.00 0.00 4.09
5686 6258 2.764010 GTTCCCACCAAGAAACCAAACT 59.236 45.455 0.00 0.00 0.00 2.66
5690 6262 2.026905 GCTGTTCCCACCAAGAAACCA 61.027 52.381 0.00 0.00 0.00 3.67
5700 6272 1.282157 ACCTTGATAGGCTGTTCCCAC 59.718 52.381 0.00 0.00 46.22 4.61
5704 6276 4.327680 ACTTGAACCTTGATAGGCTGTTC 58.672 43.478 0.00 1.42 46.22 3.18
5705 6277 4.373156 ACTTGAACCTTGATAGGCTGTT 57.627 40.909 0.00 0.00 46.22 3.16
5706 6278 4.042187 AGAACTTGAACCTTGATAGGCTGT 59.958 41.667 0.00 0.00 46.22 4.40
5707 6279 4.583871 AGAACTTGAACCTTGATAGGCTG 58.416 43.478 0.00 0.00 46.22 4.85
5709 6281 5.813157 GTCTAGAACTTGAACCTTGATAGGC 59.187 44.000 0.00 0.00 46.22 3.93
5711 6283 6.037098 CGGTCTAGAACTTGAACCTTGATAG 58.963 44.000 6.16 0.00 0.00 2.08
5712 6284 5.105473 CCGGTCTAGAACTTGAACCTTGATA 60.105 44.000 6.16 0.00 0.00 2.15
5713 6285 4.322801 CCGGTCTAGAACTTGAACCTTGAT 60.323 45.833 6.16 0.00 0.00 2.57
5714 6286 3.006537 CCGGTCTAGAACTTGAACCTTGA 59.993 47.826 6.16 0.00 0.00 3.02
5736 6310 2.017113 GCATGCACACCCTACCCTTAC 61.017 57.143 14.21 0.00 0.00 2.34
5739 6313 2.677228 GCATGCACACCCTACCCT 59.323 61.111 14.21 0.00 0.00 4.34
5741 6315 1.000896 AAGGCATGCACACCCTACC 60.001 57.895 21.36 0.00 0.00 3.18
5743 6317 0.625316 ATGAAGGCATGCACACCCTA 59.375 50.000 21.36 0.00 32.31 3.53
5755 6329 2.571548 CACCCCTGTGAATGAAGGC 58.428 57.895 0.00 0.00 45.76 4.35
5764 6338 1.945819 GCACATACACTCACCCCTGTG 60.946 57.143 0.00 0.00 44.18 3.66
5765 6339 0.324943 GCACATACACTCACCCCTGT 59.675 55.000 0.00 0.00 0.00 4.00
5766 6340 0.324614 TGCACATACACTCACCCCTG 59.675 55.000 0.00 0.00 0.00 4.45
5767 6341 1.289160 ATGCACATACACTCACCCCT 58.711 50.000 0.00 0.00 0.00 4.79
5768 6342 2.128771 AATGCACATACACTCACCCC 57.871 50.000 0.00 0.00 0.00 4.95
5769 6343 6.710295 TCATATAAATGCACATACACTCACCC 59.290 38.462 0.00 0.00 32.76 4.61
5770 6344 7.571983 GCTCATATAAATGCACATACACTCACC 60.572 40.741 0.00 0.00 32.76 4.02
5771 6345 7.293745 GCTCATATAAATGCACATACACTCAC 58.706 38.462 0.00 0.00 32.76 3.51
5772 6346 6.146021 CGCTCATATAAATGCACATACACTCA 59.854 38.462 0.00 0.00 32.76 3.41
5773 6347 6.146184 ACGCTCATATAAATGCACATACACTC 59.854 38.462 0.00 0.00 32.76 3.51
5774 6348 5.991606 ACGCTCATATAAATGCACATACACT 59.008 36.000 0.00 0.00 32.76 3.55
5775 6349 6.228273 ACGCTCATATAAATGCACATACAC 57.772 37.500 0.00 0.00 32.76 2.90
5776 6350 6.346518 CGAACGCTCATATAAATGCACATACA 60.347 38.462 0.00 0.00 32.76 2.29
5777 6351 6.009474 CGAACGCTCATATAAATGCACATAC 58.991 40.000 0.00 0.00 32.76 2.39
5778 6352 5.389411 GCGAACGCTCATATAAATGCACATA 60.389 40.000 11.97 0.00 38.26 2.29
5779 6353 4.611355 GCGAACGCTCATATAAATGCACAT 60.611 41.667 11.97 0.00 38.26 3.21
5780 6354 3.303066 GCGAACGCTCATATAAATGCACA 60.303 43.478 11.97 0.00 38.26 4.57
5781 6355 3.218398 GCGAACGCTCATATAAATGCAC 58.782 45.455 11.97 0.00 38.26 4.57
5782 6356 2.096958 CGCGAACGCTCATATAAATGCA 60.097 45.455 16.66 0.00 39.32 3.96
5783 6357 2.096909 ACGCGAACGCTCATATAAATGC 60.097 45.455 15.93 0.00 45.53 3.56
5784 6358 3.770765 ACGCGAACGCTCATATAAATG 57.229 42.857 15.93 0.46 45.53 2.32
5785 6359 4.033587 ACAAACGCGAACGCTCATATAAAT 59.966 37.500 15.93 0.00 45.53 1.40
5786 6360 3.368539 ACAAACGCGAACGCTCATATAAA 59.631 39.130 15.93 0.00 45.53 1.40
5787 6361 2.924926 ACAAACGCGAACGCTCATATAA 59.075 40.909 15.93 0.00 45.53 0.98
5788 6362 2.532235 ACAAACGCGAACGCTCATATA 58.468 42.857 15.93 0.00 45.53 0.86
5789 6363 1.355971 ACAAACGCGAACGCTCATAT 58.644 45.000 15.93 0.00 45.53 1.78
5790 6364 1.979897 TACAAACGCGAACGCTCATA 58.020 45.000 15.93 0.63 45.53 2.15
5791 6365 1.355971 ATACAAACGCGAACGCTCAT 58.644 45.000 15.93 0.13 45.53 2.90
5792 6366 1.136474 CAATACAAACGCGAACGCTCA 60.136 47.619 15.93 0.00 45.53 4.26
5793 6367 1.136446 ACAATACAAACGCGAACGCTC 60.136 47.619 15.93 0.00 45.53 5.03
5794 6368 0.863144 ACAATACAAACGCGAACGCT 59.137 45.000 15.93 0.71 45.53 5.07
5795 6369 2.490697 TACAATACAAACGCGAACGC 57.509 45.000 15.93 9.20 45.53 4.84
5797 6371 8.644264 TTTTCTAATACAATACAAACGCGAAC 57.356 30.769 15.93 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.