Multiple sequence alignment - TraesCS6B01G093900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G093900 chr6B 100.000 1455 0 0 1 1455 69706796 69708250 0.000000e+00 2687
1 TraesCS6B01G093900 chr6B 100.000 1266 0 0 1877 3142 69708672 69709937 0.000000e+00 2338
2 TraesCS6B01G093900 chr6D 92.344 1071 47 13 1877 2930 33142788 33143840 0.000000e+00 1491
3 TraesCS6B01G093900 chr6D 91.705 1073 57 15 393 1455 33141702 33142752 0.000000e+00 1459
4 TraesCS6B01G093900 chr6A 90.541 1036 63 15 433 1455 37700048 37701061 0.000000e+00 1338
5 TraesCS6B01G093900 chr6A 89.694 980 46 29 1993 2947 37701460 37702409 0.000000e+00 1199
6 TraesCS6B01G093900 chr5A 97.740 354 7 1 1 354 521677895 521678247 2.680000e-170 608
7 TraesCS6B01G093900 chr5A 98.256 344 6 0 1 344 687717184 687716841 1.250000e-168 603
8 TraesCS6B01G093900 chr7A 98.542 343 5 0 1 343 708293492 708293150 9.640000e-170 606
9 TraesCS6B01G093900 chr7A 97.701 348 8 0 1 348 571352801 571353148 1.610000e-167 599
10 TraesCS6B01G093900 chr4B 98.256 344 6 0 1 344 189136068 189135725 1.250000e-168 603
11 TraesCS6B01G093900 chr1B 98.534 341 5 0 1 341 167951020 167950680 1.250000e-168 603
12 TraesCS6B01G093900 chr1B 85.714 196 26 2 1002 1196 480326765 480326959 4.110000e-49 206
13 TraesCS6B01G093900 chr7B 97.708 349 8 0 1 349 74089111 74089459 4.480000e-168 601
14 TraesCS6B01G093900 chr3B 97.977 346 6 1 1 346 706325839 706325495 1.610000e-167 599
15 TraesCS6B01G093900 chr3B 98.240 341 6 0 1 341 798435736 798436076 5.800000e-167 597
16 TraesCS6B01G093900 chr1D 87.245 196 23 2 1002 1196 356859365 356859559 4.080000e-54 222
17 TraesCS6B01G093900 chr1A 85.714 196 26 2 1002 1196 457945338 457945532 4.110000e-49 206
18 TraesCS6B01G093900 chr1A 83.333 210 33 2 988 1196 457372179 457372387 3.200000e-45 193


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G093900 chr6B 69706796 69709937 3141 False 2512.5 2687 100.0000 1 3142 2 chr6B.!!$F1 3141
1 TraesCS6B01G093900 chr6D 33141702 33143840 2138 False 1475.0 1491 92.0245 393 2930 2 chr6D.!!$F1 2537
2 TraesCS6B01G093900 chr6A 37700048 37702409 2361 False 1268.5 1338 90.1175 433 2947 2 chr6A.!!$F1 2514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
340 341 0.03582 TGTGGCAGTTATTCGGACCC 60.036 55.0 0.0 0.0 0.0 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2301 2571 1.068472 ACTTACTGACTTGCGGACGAG 60.068 52.381 0.0 0.0 0.0 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.481128 AGGGTTAGGGTGTGGTTTGG 59.519 55.000 0.00 0.00 0.00 3.28
20 21 0.541063 GGGTTAGGGTGTGGTTTGGG 60.541 60.000 0.00 0.00 0.00 4.12
21 22 0.541063 GGTTAGGGTGTGGTTTGGGG 60.541 60.000 0.00 0.00 0.00 4.96
22 23 0.186630 GTTAGGGTGTGGTTTGGGGT 59.813 55.000 0.00 0.00 0.00 4.95
23 24 0.479378 TTAGGGTGTGGTTTGGGGTC 59.521 55.000 0.00 0.00 0.00 4.46
24 25 1.770749 TAGGGTGTGGTTTGGGGTCG 61.771 60.000 0.00 0.00 0.00 4.79
25 26 2.596338 GGTGTGGTTTGGGGTCGG 60.596 66.667 0.00 0.00 0.00 4.79
26 27 2.511900 GTGTGGTTTGGGGTCGGA 59.488 61.111 0.00 0.00 0.00 4.55
27 28 1.599797 GTGTGGTTTGGGGTCGGAG 60.600 63.158 0.00 0.00 0.00 4.63
28 29 2.671963 GTGGTTTGGGGTCGGAGC 60.672 66.667 0.00 0.00 0.00 4.70
29 30 4.323477 TGGTTTGGGGTCGGAGCG 62.323 66.667 0.53 0.00 0.00 5.03
39 40 4.889112 TCGGAGCGCCCTACGGAT 62.889 66.667 2.29 0.00 45.61 4.18
40 41 4.344474 CGGAGCGCCCTACGGATC 62.344 72.222 2.29 0.00 41.80 3.36
41 42 2.913060 GGAGCGCCCTACGGATCT 60.913 66.667 2.29 0.00 43.93 2.75
42 43 2.336809 GAGCGCCCTACGGATCTG 59.663 66.667 2.29 0.00 43.93 2.90
43 44 3.850095 GAGCGCCCTACGGATCTGC 62.850 68.421 2.29 0.00 43.93 4.26
44 45 4.971125 GCGCCCTACGGATCTGCC 62.971 72.222 0.00 0.00 43.93 4.85
45 46 4.301027 CGCCCTACGGATCTGCCC 62.301 72.222 0.00 0.00 38.44 5.36
46 47 2.844839 GCCCTACGGATCTGCCCT 60.845 66.667 0.00 0.00 0.00 5.19
47 48 3.142393 CCCTACGGATCTGCCCTG 58.858 66.667 0.00 0.00 0.00 4.45
48 49 1.762460 CCCTACGGATCTGCCCTGT 60.762 63.158 0.00 0.00 0.00 4.00
49 50 1.338136 CCCTACGGATCTGCCCTGTT 61.338 60.000 0.00 0.00 0.00 3.16
50 51 0.541863 CCTACGGATCTGCCCTGTTT 59.458 55.000 0.00 0.00 0.00 2.83
51 52 1.656652 CTACGGATCTGCCCTGTTTG 58.343 55.000 0.00 0.00 0.00 2.93
52 53 0.392461 TACGGATCTGCCCTGTTTGC 60.392 55.000 0.00 0.00 0.00 3.68
53 54 2.409870 CGGATCTGCCCTGTTTGCC 61.410 63.158 0.00 0.00 0.00 4.52
54 55 1.304381 GGATCTGCCCTGTTTGCCA 60.304 57.895 0.00 0.00 0.00 4.92
55 56 0.685458 GGATCTGCCCTGTTTGCCAT 60.685 55.000 0.00 0.00 0.00 4.40
56 57 0.458669 GATCTGCCCTGTTTGCCATG 59.541 55.000 0.00 0.00 0.00 3.66
57 58 0.974010 ATCTGCCCTGTTTGCCATGG 60.974 55.000 7.63 7.63 32.35 3.66
70 71 3.944123 CATGGCAACCAGGGATGG 58.056 61.111 0.00 0.00 36.75 3.51
71 72 2.042639 ATGGCAACCAGGGATGGC 60.043 61.111 14.09 14.09 42.27 4.40
72 73 3.684369 ATGGCAACCAGGGATGGCC 62.684 63.158 17.41 14.00 41.48 5.36
82 83 4.335647 GGATGGCCGGCGATGGAT 62.336 66.667 29.81 10.89 0.00 3.41
83 84 3.052082 GATGGCCGGCGATGGATG 61.052 66.667 29.81 0.00 0.00 3.51
84 85 3.832237 GATGGCCGGCGATGGATGT 62.832 63.158 29.81 3.71 0.00 3.06
85 86 3.832237 ATGGCCGGCGATGGATGTC 62.832 63.158 24.25 4.73 0.00 3.06
88 89 4.969196 CCGGCGATGGATGTCGGG 62.969 72.222 9.30 0.00 41.72 5.14
89 90 4.969196 CGGCGATGGATGTCGGGG 62.969 72.222 0.00 0.00 41.72 5.73
90 91 3.861797 GGCGATGGATGTCGGGGT 61.862 66.667 0.00 0.00 41.72 4.95
91 92 2.189521 GCGATGGATGTCGGGGTT 59.810 61.111 0.00 0.00 41.72 4.11
92 93 1.887707 GCGATGGATGTCGGGGTTC 60.888 63.158 0.00 0.00 41.72 3.62
93 94 1.591594 CGATGGATGTCGGGGTTCG 60.592 63.158 0.00 0.00 37.94 3.95
94 95 1.820581 GATGGATGTCGGGGTTCGA 59.179 57.895 0.00 0.00 46.77 3.71
101 102 2.678934 TCGGGGTTCGAGAGGTGG 60.679 66.667 0.00 0.00 43.74 4.61
102 103 3.771160 CGGGGTTCGAGAGGTGGG 61.771 72.222 0.00 0.00 42.43 4.61
103 104 3.400054 GGGGTTCGAGAGGTGGGG 61.400 72.222 0.00 0.00 0.00 4.96
104 105 3.400054 GGGTTCGAGAGGTGGGGG 61.400 72.222 0.00 0.00 0.00 5.40
105 106 2.284405 GGTTCGAGAGGTGGGGGA 60.284 66.667 0.00 0.00 0.00 4.81
106 107 2.657066 GGTTCGAGAGGTGGGGGAC 61.657 68.421 0.00 0.00 0.00 4.46
107 108 2.678934 TTCGAGAGGTGGGGGACG 60.679 66.667 0.00 0.00 0.00 4.79
108 109 3.214190 TTCGAGAGGTGGGGGACGA 62.214 63.158 0.00 0.00 0.00 4.20
109 110 2.442272 CGAGAGGTGGGGGACGAT 60.442 66.667 0.00 0.00 0.00 3.73
110 111 2.786495 CGAGAGGTGGGGGACGATG 61.786 68.421 0.00 0.00 0.00 3.84
111 112 2.365635 AGAGGTGGGGGACGATGG 60.366 66.667 0.00 0.00 0.00 3.51
112 113 4.176752 GAGGTGGGGGACGATGGC 62.177 72.222 0.00 0.00 0.00 4.40
130 131 2.124403 GGCGTACGAGAGAGGGGA 60.124 66.667 21.65 0.00 0.00 4.81
131 132 1.528776 GGCGTACGAGAGAGGGGAT 60.529 63.158 21.65 0.00 0.00 3.85
132 133 1.655329 GCGTACGAGAGAGGGGATG 59.345 63.158 21.65 0.00 0.00 3.51
133 134 1.797211 GCGTACGAGAGAGGGGATGG 61.797 65.000 21.65 0.00 0.00 3.51
134 135 0.179026 CGTACGAGAGAGGGGATGGA 60.179 60.000 10.44 0.00 0.00 3.41
135 136 1.545875 CGTACGAGAGAGGGGATGGAT 60.546 57.143 10.44 0.00 0.00 3.41
136 137 2.164338 GTACGAGAGAGGGGATGGATC 58.836 57.143 0.00 0.00 0.00 3.36
137 138 0.538516 ACGAGAGAGGGGATGGATCG 60.539 60.000 0.00 0.00 35.00 3.69
138 139 1.247419 CGAGAGAGGGGATGGATCGG 61.247 65.000 0.00 0.00 0.00 4.18
139 140 0.113385 GAGAGAGGGGATGGATCGGA 59.887 60.000 0.00 0.00 0.00 4.55
140 141 0.114168 AGAGAGGGGATGGATCGGAG 59.886 60.000 0.00 0.00 0.00 4.63
141 142 0.902516 GAGAGGGGATGGATCGGAGG 60.903 65.000 0.00 0.00 0.00 4.30
142 143 2.527875 AGGGGATGGATCGGAGGC 60.528 66.667 0.00 0.00 0.00 4.70
143 144 4.008933 GGGGATGGATCGGAGGCG 62.009 72.222 0.00 0.00 0.00 5.52
144 145 3.234730 GGGATGGATCGGAGGCGT 61.235 66.667 0.00 0.00 0.00 5.68
145 146 2.029666 GGATGGATCGGAGGCGTG 59.970 66.667 0.00 0.00 0.00 5.34
146 147 2.029666 GATGGATCGGAGGCGTGG 59.970 66.667 0.00 0.00 0.00 4.94
147 148 2.443952 ATGGATCGGAGGCGTGGA 60.444 61.111 0.00 0.00 0.00 4.02
148 149 1.821061 GATGGATCGGAGGCGTGGAT 61.821 60.000 0.00 0.00 0.00 3.41
149 150 1.821061 ATGGATCGGAGGCGTGGATC 61.821 60.000 8.00 8.00 36.65 3.36
150 151 2.049985 GATCGGAGGCGTGGATCG 60.050 66.667 2.42 0.00 43.12 3.69
151 152 3.559657 GATCGGAGGCGTGGATCGG 62.560 68.421 2.42 0.00 40.26 4.18
159 160 4.873129 CGTGGATCGGCTGGGTCG 62.873 72.222 0.00 0.00 35.71 4.79
160 161 3.771160 GTGGATCGGCTGGGTCGT 61.771 66.667 0.00 0.00 30.45 4.34
161 162 3.770040 TGGATCGGCTGGGTCGTG 61.770 66.667 0.00 0.00 30.45 4.35
179 180 3.737172 CGGGCAGCCGGTCTTTTG 61.737 66.667 10.93 0.00 0.00 2.44
180 181 2.597510 GGGCAGCCGGTCTTTTGT 60.598 61.111 5.00 0.00 0.00 2.83
181 182 2.626780 GGGCAGCCGGTCTTTTGTC 61.627 63.158 5.00 0.00 0.00 3.18
182 183 2.626780 GGCAGCCGGTCTTTTGTCC 61.627 63.158 1.90 0.00 0.00 4.02
183 184 2.626780 GCAGCCGGTCTTTTGTCCC 61.627 63.158 1.90 0.00 0.00 4.46
184 185 2.032071 AGCCGGTCTTTTGTCCCG 59.968 61.111 1.90 0.00 41.37 5.14
187 188 3.961729 CGGTCTTTTGTCCCGGAC 58.038 61.111 10.96 10.96 38.09 4.79
188 189 2.025418 CGGTCTTTTGTCCCGGACG 61.025 63.158 13.02 0.00 38.09 4.79
189 190 1.670083 GGTCTTTTGTCCCGGACGG 60.670 63.158 13.02 3.25 34.95 4.79
217 218 3.747976 GCGGGATTGCCACACACC 61.748 66.667 0.00 0.00 35.15 4.16
218 219 3.430862 CGGGATTGCCACACACCG 61.431 66.667 0.00 0.00 35.15 4.94
219 220 3.061848 GGGATTGCCACACACCGG 61.062 66.667 0.00 0.00 35.15 5.28
220 221 2.033448 GGATTGCCACACACCGGA 59.967 61.111 9.46 0.00 0.00 5.14
221 222 2.332654 GGATTGCCACACACCGGAC 61.333 63.158 9.46 0.00 0.00 4.79
222 223 2.668212 ATTGCCACACACCGGACG 60.668 61.111 9.46 0.00 0.00 4.79
223 224 3.469863 ATTGCCACACACCGGACGT 62.470 57.895 9.46 0.78 0.00 4.34
239 240 4.999939 GTGCGGGCCGTGCTTTTG 63.000 66.667 28.82 0.00 0.00 2.44
241 242 4.999939 GCGGGCCGTGCTTTTGTG 63.000 66.667 28.82 0.00 0.00 3.33
242 243 4.999939 CGGGCCGTGCTTTTGTGC 63.000 66.667 19.97 0.00 0.00 4.57
243 244 4.999939 GGGCCGTGCTTTTGTGCG 63.000 66.667 0.00 0.00 35.36 5.34
245 246 4.629115 GCCGTGCTTTTGTGCGCT 62.629 61.111 9.73 0.00 40.87 5.92
246 247 2.427410 CCGTGCTTTTGTGCGCTC 60.427 61.111 9.73 5.51 40.87 5.03
247 248 2.792543 CGTGCTTTTGTGCGCTCG 60.793 61.111 9.73 0.00 40.87 5.03
248 249 2.427410 GTGCTTTTGTGCGCTCGG 60.427 61.111 9.73 0.00 40.01 4.63
249 250 2.590291 TGCTTTTGTGCGCTCGGA 60.590 55.556 9.73 0.00 35.36 4.55
250 251 2.127232 GCTTTTGTGCGCTCGGAC 60.127 61.111 9.73 6.98 36.97 4.79
251 252 2.170985 CTTTTGTGCGCTCGGACG 59.829 61.111 9.73 0.00 39.39 4.79
252 253 2.586635 TTTTGTGCGCTCGGACGT 60.587 55.556 9.73 0.00 39.39 4.34
253 254 2.748546 CTTTTGTGCGCTCGGACGTG 62.749 60.000 9.73 0.00 39.39 4.49
279 280 2.657237 GGCCGATCCCCGTCTATG 59.343 66.667 0.00 0.00 36.31 2.23
280 281 2.048127 GCCGATCCCCGTCTATGC 60.048 66.667 0.00 0.00 36.31 3.14
281 282 2.657237 CCGATCCCCGTCTATGCC 59.343 66.667 0.00 0.00 36.31 4.40
282 283 2.258591 CGATCCCCGTCTATGCCG 59.741 66.667 0.00 0.00 0.00 5.69
283 284 2.048127 GATCCCCGTCTATGCCGC 60.048 66.667 0.00 0.00 0.00 6.53
284 285 2.842462 ATCCCCGTCTATGCCGCA 60.842 61.111 0.00 0.00 0.00 5.69
285 286 3.165160 ATCCCCGTCTATGCCGCAC 62.165 63.158 0.00 0.00 0.00 5.34
287 288 4.201679 CCCGTCTATGCCGCACGA 62.202 66.667 0.00 0.00 35.49 4.35
288 289 2.655364 CCGTCTATGCCGCACGAG 60.655 66.667 0.00 0.00 35.49 4.18
289 290 2.655364 CGTCTATGCCGCACGAGG 60.655 66.667 0.00 0.00 35.49 4.63
308 309 4.171103 GTGCGGGCGGGTTCCTAT 62.171 66.667 0.00 0.00 0.00 2.57
309 310 3.857038 TGCGGGCGGGTTCCTATC 61.857 66.667 0.00 0.00 0.00 2.08
310 311 4.963428 GCGGGCGGGTTCCTATCG 62.963 72.222 0.00 0.00 0.00 2.92
311 312 3.221389 CGGGCGGGTTCCTATCGA 61.221 66.667 0.00 0.00 0.00 3.59
312 313 2.420466 GGGCGGGTTCCTATCGAC 59.580 66.667 0.00 0.00 0.00 4.20
313 314 2.027169 GGCGGGTTCCTATCGACG 59.973 66.667 0.00 0.00 0.00 5.12
314 315 2.657620 GCGGGTTCCTATCGACGC 60.658 66.667 0.00 0.00 40.19 5.19
315 316 2.027169 CGGGTTCCTATCGACGCC 59.973 66.667 0.00 0.00 0.00 5.68
316 317 2.777972 CGGGTTCCTATCGACGCCA 61.778 63.158 0.00 0.00 0.00 5.69
317 318 1.227176 GGGTTCCTATCGACGCCAC 60.227 63.158 0.00 0.00 0.00 5.01
318 319 1.514087 GGTTCCTATCGACGCCACA 59.486 57.895 0.00 0.00 0.00 4.17
319 320 0.804933 GGTTCCTATCGACGCCACAC 60.805 60.000 0.00 0.00 0.00 3.82
334 335 2.594529 CACACGTGTGGCAGTTATTC 57.405 50.000 35.65 0.00 42.10 1.75
335 336 1.136363 CACACGTGTGGCAGTTATTCG 60.136 52.381 35.65 10.09 42.10 3.34
336 337 0.442310 CACGTGTGGCAGTTATTCGG 59.558 55.000 7.58 0.00 0.00 4.30
337 338 0.319083 ACGTGTGGCAGTTATTCGGA 59.681 50.000 0.00 0.00 0.00 4.55
338 339 0.719465 CGTGTGGCAGTTATTCGGAC 59.281 55.000 0.00 0.00 0.00 4.79
339 340 1.084289 GTGTGGCAGTTATTCGGACC 58.916 55.000 0.00 0.00 0.00 4.46
340 341 0.035820 TGTGGCAGTTATTCGGACCC 60.036 55.000 0.00 0.00 0.00 4.46
341 342 0.252197 GTGGCAGTTATTCGGACCCT 59.748 55.000 0.00 0.00 0.00 4.34
342 343 0.988832 TGGCAGTTATTCGGACCCTT 59.011 50.000 0.00 0.00 0.00 3.95
343 344 2.093341 GTGGCAGTTATTCGGACCCTTA 60.093 50.000 0.00 0.00 0.00 2.69
344 345 2.572556 TGGCAGTTATTCGGACCCTTAA 59.427 45.455 0.00 0.00 0.00 1.85
345 346 3.009253 TGGCAGTTATTCGGACCCTTAAA 59.991 43.478 0.00 0.00 0.00 1.52
346 347 4.011698 GGCAGTTATTCGGACCCTTAAAA 58.988 43.478 0.00 0.00 0.00 1.52
347 348 4.460034 GGCAGTTATTCGGACCCTTAAAAA 59.540 41.667 0.00 0.00 0.00 1.94
348 349 5.126545 GGCAGTTATTCGGACCCTTAAAAAT 59.873 40.000 0.00 0.00 0.00 1.82
349 350 6.319405 GGCAGTTATTCGGACCCTTAAAAATA 59.681 38.462 0.00 0.00 0.00 1.40
350 351 7.415229 GCAGTTATTCGGACCCTTAAAAATAG 58.585 38.462 0.00 0.00 0.00 1.73
351 352 7.415229 CAGTTATTCGGACCCTTAAAAATAGC 58.585 38.462 0.00 0.00 0.00 2.97
352 353 7.282450 CAGTTATTCGGACCCTTAAAAATAGCT 59.718 37.037 0.00 0.00 0.00 3.32
353 354 8.488668 AGTTATTCGGACCCTTAAAAATAGCTA 58.511 33.333 0.00 0.00 0.00 3.32
354 355 9.281371 GTTATTCGGACCCTTAAAAATAGCTAT 57.719 33.333 0.00 0.00 0.00 2.97
355 356 7.745620 ATTCGGACCCTTAAAAATAGCTATG 57.254 36.000 7.09 0.00 0.00 2.23
356 357 5.617252 TCGGACCCTTAAAAATAGCTATGG 58.383 41.667 7.09 4.75 0.00 2.74
357 358 5.367352 TCGGACCCTTAAAAATAGCTATGGA 59.633 40.000 7.09 0.00 0.00 3.41
358 359 6.059484 CGGACCCTTAAAAATAGCTATGGAA 58.941 40.000 7.09 0.00 0.00 3.53
359 360 6.544564 CGGACCCTTAAAAATAGCTATGGAAA 59.455 38.462 7.09 0.00 0.00 3.13
360 361 7.067737 CGGACCCTTAAAAATAGCTATGGAAAA 59.932 37.037 7.09 0.00 0.00 2.29
361 362 8.755028 GGACCCTTAAAAATAGCTATGGAAAAA 58.245 33.333 7.09 0.00 0.00 1.94
362 363 9.582431 GACCCTTAAAAATAGCTATGGAAAAAC 57.418 33.333 7.09 0.00 0.00 2.43
363 364 9.095700 ACCCTTAAAAATAGCTATGGAAAAACA 57.904 29.630 7.09 0.00 0.00 2.83
364 365 9.936759 CCCTTAAAAATAGCTATGGAAAAACAA 57.063 29.630 7.09 0.00 0.00 2.83
369 370 8.702163 AAAATAGCTATGGAAAAACAAATCGG 57.298 30.769 7.09 0.00 0.00 4.18
370 371 7.639113 AATAGCTATGGAAAAACAAATCGGA 57.361 32.000 7.09 0.00 0.00 4.55
371 372 5.975693 AGCTATGGAAAAACAAATCGGAA 57.024 34.783 0.00 0.00 0.00 4.30
372 373 6.530019 AGCTATGGAAAAACAAATCGGAAT 57.470 33.333 0.00 0.00 0.00 3.01
373 374 6.935167 AGCTATGGAAAAACAAATCGGAATT 58.065 32.000 0.00 0.00 0.00 2.17
374 375 6.813152 AGCTATGGAAAAACAAATCGGAATTG 59.187 34.615 4.29 4.29 0.00 2.32
375 376 6.811170 GCTATGGAAAAACAAATCGGAATTGA 59.189 34.615 12.50 0.00 0.00 2.57
376 377 7.492344 GCTATGGAAAAACAAATCGGAATTGAT 59.508 33.333 12.50 0.00 0.00 2.57
377 378 7.832503 ATGGAAAAACAAATCGGAATTGATC 57.167 32.000 12.50 5.34 0.00 2.92
378 379 6.991938 TGGAAAAACAAATCGGAATTGATCT 58.008 32.000 12.50 0.00 0.00 2.75
379 380 7.441017 TGGAAAAACAAATCGGAATTGATCTT 58.559 30.769 12.50 2.60 0.00 2.40
380 381 7.930865 TGGAAAAACAAATCGGAATTGATCTTT 59.069 29.630 12.50 8.06 0.00 2.52
381 382 9.418045 GGAAAAACAAATCGGAATTGATCTTTA 57.582 29.630 12.50 0.00 0.00 1.85
415 420 7.686438 ATTTGAAAATGGCTATGGAAAAACC 57.314 32.000 0.00 0.00 39.54 3.27
427 432 4.577988 TGGAAAAACCAATCGGGATAGA 57.422 40.909 0.00 0.00 46.75 1.98
428 433 5.124036 TGGAAAAACCAATCGGGATAGAT 57.876 39.130 0.00 0.00 46.75 1.98
487 495 8.360390 AGATTTACTTTTTGAAGTGTTCCATCC 58.640 33.333 2.25 0.00 34.37 3.51
489 497 5.520376 ACTTTTTGAAGTGTTCCATCCAG 57.480 39.130 0.00 0.00 0.00 3.86
492 500 1.067295 TGAAGTGTTCCATCCAGCCT 58.933 50.000 0.00 0.00 0.00 4.58
501 509 1.995542 TCCATCCAGCCTCCTTTTCTT 59.004 47.619 0.00 0.00 0.00 2.52
505 513 4.562143 CCATCCAGCCTCCTTTTCTTTTTG 60.562 45.833 0.00 0.00 0.00 2.44
506 514 3.909732 TCCAGCCTCCTTTTCTTTTTGA 58.090 40.909 0.00 0.00 0.00 2.69
507 515 4.285863 TCCAGCCTCCTTTTCTTTTTGAA 58.714 39.130 0.00 0.00 0.00 2.69
509 517 4.811024 CCAGCCTCCTTTTCTTTTTGAAAC 59.189 41.667 0.00 0.00 43.55 2.78
511 519 5.521372 CAGCCTCCTTTTCTTTTTGAAACAG 59.479 40.000 0.00 0.00 43.55 3.16
573 583 2.423577 ACAACCCACAAATCGTAGAGC 58.576 47.619 0.00 0.00 43.63 4.09
611 621 2.825836 CGCATCCAGCAACCTCCC 60.826 66.667 0.00 0.00 46.13 4.30
614 624 2.128226 ATCCAGCAACCTCCCCCT 59.872 61.111 0.00 0.00 0.00 4.79
615 625 2.003548 ATCCAGCAACCTCCCCCTC 61.004 63.158 0.00 0.00 0.00 4.30
616 626 3.732849 CCAGCAACCTCCCCCTCC 61.733 72.222 0.00 0.00 0.00 4.30
617 627 3.732849 CAGCAACCTCCCCCTCCC 61.733 72.222 0.00 0.00 0.00 4.30
618 628 3.960313 AGCAACCTCCCCCTCCCT 61.960 66.667 0.00 0.00 0.00 4.20
619 629 3.412408 GCAACCTCCCCCTCCCTC 61.412 72.222 0.00 0.00 0.00 4.30
620 630 2.456840 CAACCTCCCCCTCCCTCT 59.543 66.667 0.00 0.00 0.00 3.69
621 631 1.690985 CAACCTCCCCCTCCCTCTC 60.691 68.421 0.00 0.00 0.00 3.20
622 632 1.869452 AACCTCCCCCTCCCTCTCT 60.869 63.158 0.00 0.00 0.00 3.10
625 635 3.430497 TCCCCCTCCCTCTCTCCG 61.430 72.222 0.00 0.00 0.00 4.63
673 683 1.654220 CACAGAAACCAACCTGGCG 59.346 57.895 0.00 0.00 42.67 5.69
675 685 0.535102 ACAGAAACCAACCTGGCGAG 60.535 55.000 0.00 0.00 42.67 5.03
676 686 1.073199 AGAAACCAACCTGGCGAGG 59.927 57.895 14.03 14.03 42.67 4.63
714 724 3.923864 AGCCCACACGTGCGAAGA 61.924 61.111 17.22 0.00 0.00 2.87
794 804 4.511246 CATCACGGCCCCCAGCAT 62.511 66.667 0.00 0.00 46.50 3.79
795 805 4.195334 ATCACGGCCCCCAGCATC 62.195 66.667 0.00 0.00 46.50 3.91
802 812 2.689691 GCCCCCAGCATCCTACCAA 61.690 63.158 0.00 0.00 42.97 3.67
815 825 2.552585 CTACCAACCGTCCGATGCGT 62.553 60.000 0.00 0.00 0.00 5.24
922 932 2.173164 GAGCAGATAAGATCGATCGCG 58.827 52.381 19.33 0.00 39.35 5.87
923 933 1.135546 AGCAGATAAGATCGATCGCGG 60.136 52.381 19.33 11.75 38.28 6.46
924 934 1.263776 CAGATAAGATCGATCGCGGC 58.736 55.000 19.33 10.80 38.28 6.53
1083 1102 1.137825 CAGCGAGGACCTCTTCGTC 59.862 63.158 19.39 4.33 45.55 4.20
1344 1363 1.379044 CTACGGAGGTGGGTACGGT 60.379 63.158 0.00 0.00 0.00 4.83
1350 1369 4.710167 GGTGGGTACGGTGGTGGC 62.710 72.222 0.00 0.00 0.00 5.01
1981 2000 3.047280 CGGCGGCAACTGCTACAA 61.047 61.111 10.53 0.00 41.70 2.41
2231 2501 2.780094 CGATCTGGGTCTGAGCGCT 61.780 63.158 11.27 11.27 34.96 5.92
2301 2571 1.140452 GGAATCCGTCCTAGGGGAAAC 59.860 57.143 9.46 7.05 44.15 2.78
2304 2574 0.682209 TCCGTCCTAGGGGAAACTCG 60.682 60.000 9.46 3.25 44.15 4.18
2305 2575 0.969409 CCGTCCTAGGGGAAACTCGT 60.969 60.000 9.46 0.00 44.15 4.18
2306 2576 0.455005 CGTCCTAGGGGAAACTCGTC 59.545 60.000 9.46 0.00 44.15 4.20
2307 2577 0.822811 GTCCTAGGGGAAACTCGTCC 59.177 60.000 9.46 0.00 44.15 4.79
2308 2578 0.682209 TCCTAGGGGAAACTCGTCCG 60.682 60.000 9.46 0.00 38.93 4.79
2312 2582 3.562635 GGGAAACTCGTCCGCAAG 58.437 61.111 0.00 0.00 38.72 4.01
2313 2583 1.301479 GGGAAACTCGTCCGCAAGT 60.301 57.895 0.00 0.00 38.72 3.16
2314 2584 1.289800 GGGAAACTCGTCCGCAAGTC 61.290 60.000 0.00 0.00 38.72 3.01
2315 2585 0.599204 GGAAACTCGTCCGCAAGTCA 60.599 55.000 0.00 0.00 0.00 3.41
2316 2586 0.784778 GAAACTCGTCCGCAAGTCAG 59.215 55.000 0.00 0.00 0.00 3.51
2317 2587 0.104304 AAACTCGTCCGCAAGTCAGT 59.896 50.000 0.00 0.00 0.00 3.41
2318 2588 0.956633 AACTCGTCCGCAAGTCAGTA 59.043 50.000 0.00 0.00 0.00 2.74
2504 2778 7.542130 GGTTTCATCGAAAAGTAAAATGATGCT 59.458 33.333 0.00 0.00 33.14 3.79
2509 2786 6.148948 TCGAAAAGTAAAATGATGCTGGTTG 58.851 36.000 0.00 0.00 0.00 3.77
2521 2798 4.164796 TGATGCTGGTTGTTATCATCCTCT 59.835 41.667 0.00 0.00 35.22 3.69
2524 2801 5.858381 TGCTGGTTGTTATCATCCTCTATC 58.142 41.667 3.21 0.00 35.22 2.08
2525 2802 5.221722 TGCTGGTTGTTATCATCCTCTATCC 60.222 44.000 3.21 0.00 35.22 2.59
2531 2816 7.389053 GGTTGTTATCATCCTCTATCCATGAAC 59.611 40.741 0.00 0.00 32.39 3.18
2534 2819 7.179160 TGTTATCATCCTCTATCCATGAACGAT 59.821 37.037 0.00 0.00 30.43 3.73
2552 2840 6.875726 TGAACGATTGAATTCTCTGTCAGATT 59.124 34.615 2.22 0.00 0.00 2.40
2561 2849 8.849168 TGAATTCTCTGTCAGATTAGATCTCTC 58.151 37.037 2.22 0.00 37.58 3.20
2564 2852 6.298361 TCTCTGTCAGATTAGATCTCTCCTG 58.702 44.000 2.22 5.20 37.58 3.86
2565 2853 4.826733 TCTGTCAGATTAGATCTCTCCTGC 59.173 45.833 0.00 2.81 37.58 4.85
2571 2859 1.407936 TAGATCTCTCCTGCAGTGGC 58.592 55.000 13.81 0.00 41.68 5.01
2587 2875 4.560513 GCAGTGGCAGGACTATTATCTCTC 60.561 50.000 0.00 0.00 40.72 3.20
2588 2876 4.021544 CAGTGGCAGGACTATTATCTCTCC 60.022 50.000 0.00 0.00 0.00 3.71
2602 2890 3.757947 TCTCTCCCTGTCATCCTGTTA 57.242 47.619 0.00 0.00 0.00 2.41
2635 2930 9.383519 GATTATGATGAAGTACAGTTTGGAAGA 57.616 33.333 0.00 0.00 0.00 2.87
2649 2944 8.375506 ACAGTTTGGAAGATGATTAACTAGTGA 58.624 33.333 0.00 0.00 0.00 3.41
2651 2946 9.965902 AGTTTGGAAGATGATTAACTAGTGATT 57.034 29.630 0.00 0.00 0.00 2.57
2705 3003 2.640316 AGTGAGGTTTTGTCTGGGTC 57.360 50.000 0.00 0.00 0.00 4.46
2717 3016 3.701604 CTGGGTCGCGTAGTGGAGC 62.702 68.421 5.77 0.00 39.32 4.70
2727 3026 2.927871 GCGTAGTGGAGCGGAAAGTTTA 60.928 50.000 0.00 0.00 0.00 2.01
2773 3073 1.052124 ATCCGGGGGAAGCGTCAATA 61.052 55.000 0.00 0.00 34.34 1.90
2885 3186 4.069304 TGGTTGCGTTGTCTTTAAGCTAT 58.931 39.130 0.00 0.00 0.00 2.97
2929 3230 2.443016 TTTTTGGCCCGTGCTGGT 60.443 55.556 0.00 0.00 37.74 4.00
2930 3231 1.152735 TTTTTGGCCCGTGCTGGTA 60.153 52.632 0.00 0.00 37.74 3.25
2931 3232 0.540830 TTTTTGGCCCGTGCTGGTAT 60.541 50.000 0.00 0.00 37.74 2.73
2932 3233 1.247419 TTTTGGCCCGTGCTGGTATG 61.247 55.000 0.00 0.00 37.74 2.39
2933 3234 3.636929 TTGGCCCGTGCTGGTATGG 62.637 63.158 0.00 0.00 37.74 2.74
2934 3235 4.109675 GGCCCGTGCTGGTATGGT 62.110 66.667 0.00 0.00 37.74 3.55
2947 3248 5.547666 TGCTGGTATGGTCCATATACATCTT 59.452 40.000 14.78 0.00 36.84 2.40
2948 3249 6.109359 GCTGGTATGGTCCATATACATCTTC 58.891 44.000 14.78 0.00 36.84 2.87
2949 3250 6.280855 TGGTATGGTCCATATACATCTTCG 57.719 41.667 14.78 0.00 33.66 3.79
2950 3251 5.778241 TGGTATGGTCCATATACATCTTCGT 59.222 40.000 14.78 0.00 33.66 3.85
2951 3252 6.269077 TGGTATGGTCCATATACATCTTCGTT 59.731 38.462 14.78 0.00 33.66 3.85
2952 3253 7.159372 GGTATGGTCCATATACATCTTCGTTT 58.841 38.462 14.78 0.00 33.66 3.60
2953 3254 7.660208 GGTATGGTCCATATACATCTTCGTTTT 59.340 37.037 14.78 0.00 33.66 2.43
2954 3255 9.052759 GTATGGTCCATATACATCTTCGTTTTT 57.947 33.333 14.78 0.00 32.56 1.94
2977 3278 9.947669 TTTTTGTGATTTATTTTTGGATTGCTG 57.052 25.926 0.00 0.00 0.00 4.41
2978 3279 8.674263 TTTGTGATTTATTTTTGGATTGCTGT 57.326 26.923 0.00 0.00 0.00 4.40
2979 3280 8.674263 TTGTGATTTATTTTTGGATTGCTGTT 57.326 26.923 0.00 0.00 0.00 3.16
2980 3281 8.085720 TGTGATTTATTTTTGGATTGCTGTTG 57.914 30.769 0.00 0.00 0.00 3.33
2981 3282 7.714377 TGTGATTTATTTTTGGATTGCTGTTGT 59.286 29.630 0.00 0.00 0.00 3.32
2982 3283 8.011106 GTGATTTATTTTTGGATTGCTGTTGTG 58.989 33.333 0.00 0.00 0.00 3.33
2983 3284 7.930325 TGATTTATTTTTGGATTGCTGTTGTGA 59.070 29.630 0.00 0.00 0.00 3.58
2984 3285 8.851541 ATTTATTTTTGGATTGCTGTTGTGAT 57.148 26.923 0.00 0.00 0.00 3.06
2985 3286 9.941325 ATTTATTTTTGGATTGCTGTTGTGATA 57.059 25.926 0.00 0.00 0.00 2.15
2986 3287 8.984891 TTATTTTTGGATTGCTGTTGTGATAG 57.015 30.769 0.00 0.00 0.00 2.08
2987 3288 4.439305 TTTGGATTGCTGTTGTGATAGC 57.561 40.909 0.00 0.00 40.13 2.97
2988 3289 3.354948 TGGATTGCTGTTGTGATAGCT 57.645 42.857 0.00 0.00 40.34 3.32
2989 3290 3.273434 TGGATTGCTGTTGTGATAGCTC 58.727 45.455 0.00 0.00 40.34 4.09
2990 3291 3.054875 TGGATTGCTGTTGTGATAGCTCT 60.055 43.478 0.00 0.00 40.34 4.09
2991 3292 3.311871 GGATTGCTGTTGTGATAGCTCTG 59.688 47.826 0.00 0.00 40.34 3.35
2992 3293 3.407424 TTGCTGTTGTGATAGCTCTGT 57.593 42.857 0.00 0.00 40.34 3.41
2993 3294 4.535526 TTGCTGTTGTGATAGCTCTGTA 57.464 40.909 0.00 0.00 40.34 2.74
2994 3295 4.535526 TGCTGTTGTGATAGCTCTGTAA 57.464 40.909 0.00 0.00 40.34 2.41
2995 3296 4.245660 TGCTGTTGTGATAGCTCTGTAAC 58.754 43.478 0.00 0.00 40.34 2.50
2996 3297 4.021104 TGCTGTTGTGATAGCTCTGTAACT 60.021 41.667 0.00 0.00 40.34 2.24
2997 3298 5.185056 TGCTGTTGTGATAGCTCTGTAACTA 59.815 40.000 0.00 0.00 40.34 2.24
2998 3299 5.746245 GCTGTTGTGATAGCTCTGTAACTAG 59.254 44.000 0.00 0.00 37.09 2.57
2999 3300 5.651530 TGTTGTGATAGCTCTGTAACTAGC 58.348 41.667 0.00 0.00 39.08 3.42
3000 3301 5.185056 TGTTGTGATAGCTCTGTAACTAGCA 59.815 40.000 0.00 0.00 41.32 3.49
3001 3302 5.914898 TGTGATAGCTCTGTAACTAGCAA 57.085 39.130 0.00 0.00 41.32 3.91
3002 3303 5.895928 TGTGATAGCTCTGTAACTAGCAAG 58.104 41.667 0.00 0.00 41.32 4.01
3003 3304 5.163509 TGTGATAGCTCTGTAACTAGCAAGG 60.164 44.000 0.00 0.00 41.32 3.61
3004 3305 4.956700 TGATAGCTCTGTAACTAGCAAGGT 59.043 41.667 0.00 0.00 41.32 3.50
3005 3306 5.422331 TGATAGCTCTGTAACTAGCAAGGTT 59.578 40.000 0.00 0.00 41.32 3.50
3006 3307 3.931578 AGCTCTGTAACTAGCAAGGTTG 58.068 45.455 0.00 0.00 41.32 3.77
3007 3308 3.578716 AGCTCTGTAACTAGCAAGGTTGA 59.421 43.478 0.00 0.00 41.32 3.18
3008 3309 3.680458 GCTCTGTAACTAGCAAGGTTGAC 59.320 47.826 0.00 0.00 38.63 3.18
3009 3310 4.799586 GCTCTGTAACTAGCAAGGTTGACA 60.800 45.833 0.00 0.00 38.63 3.58
3010 3311 4.628074 TCTGTAACTAGCAAGGTTGACAC 58.372 43.478 0.00 0.00 0.00 3.67
3011 3312 4.344102 TCTGTAACTAGCAAGGTTGACACT 59.656 41.667 0.00 0.00 0.00 3.55
3012 3313 4.377021 TGTAACTAGCAAGGTTGACACTG 58.623 43.478 0.00 0.00 0.00 3.66
3013 3314 3.838244 AACTAGCAAGGTTGACACTGA 57.162 42.857 0.00 0.00 0.00 3.41
3014 3315 3.838244 ACTAGCAAGGTTGACACTGAA 57.162 42.857 0.00 0.00 0.00 3.02
3015 3316 4.357918 ACTAGCAAGGTTGACACTGAAT 57.642 40.909 0.00 0.00 0.00 2.57
3016 3317 4.718961 ACTAGCAAGGTTGACACTGAATT 58.281 39.130 0.00 0.00 0.00 2.17
3017 3318 5.133221 ACTAGCAAGGTTGACACTGAATTT 58.867 37.500 0.00 0.00 0.00 1.82
3018 3319 5.594317 ACTAGCAAGGTTGACACTGAATTTT 59.406 36.000 0.00 0.00 0.00 1.82
3019 3320 4.936891 AGCAAGGTTGACACTGAATTTTC 58.063 39.130 0.00 0.00 0.00 2.29
3020 3321 4.646492 AGCAAGGTTGACACTGAATTTTCT 59.354 37.500 0.00 0.00 0.00 2.52
3021 3322 4.741676 GCAAGGTTGACACTGAATTTTCTG 59.258 41.667 0.00 0.00 0.00 3.02
3022 3323 4.574599 AGGTTGACACTGAATTTTCTGC 57.425 40.909 0.00 0.00 0.00 4.26
3023 3324 4.210331 AGGTTGACACTGAATTTTCTGCT 58.790 39.130 0.00 0.00 0.00 4.24
3024 3325 4.037208 AGGTTGACACTGAATTTTCTGCTG 59.963 41.667 0.00 0.00 0.00 4.41
3025 3326 4.202050 GGTTGACACTGAATTTTCTGCTGT 60.202 41.667 0.00 2.52 0.00 4.40
3026 3327 5.343249 GTTGACACTGAATTTTCTGCTGTT 58.657 37.500 0.00 0.00 0.00 3.16
3027 3328 6.459573 GGTTGACACTGAATTTTCTGCTGTTA 60.460 38.462 0.00 0.00 0.00 2.41
3028 3329 6.304356 TGACACTGAATTTTCTGCTGTTAG 57.696 37.500 0.00 0.00 0.00 2.34
3029 3330 6.054941 TGACACTGAATTTTCTGCTGTTAGA 58.945 36.000 0.00 0.00 0.00 2.10
3030 3331 6.017934 TGACACTGAATTTTCTGCTGTTAGAC 60.018 38.462 0.00 0.00 0.00 2.59
3031 3332 5.822519 ACACTGAATTTTCTGCTGTTAGACA 59.177 36.000 0.00 0.00 0.00 3.41
3032 3333 6.138761 CACTGAATTTTCTGCTGTTAGACAC 58.861 40.000 0.00 0.00 0.00 3.67
3033 3334 6.017605 CACTGAATTTTCTGCTGTTAGACACT 60.018 38.462 0.00 0.00 0.00 3.55
3034 3335 6.017605 ACTGAATTTTCTGCTGTTAGACACTG 60.018 38.462 0.00 0.00 0.00 3.66
3035 3336 6.054941 TGAATTTTCTGCTGTTAGACACTGA 58.945 36.000 0.00 0.00 0.00 3.41
3036 3337 6.542005 TGAATTTTCTGCTGTTAGACACTGAA 59.458 34.615 0.00 0.00 0.00 3.02
3037 3338 7.229306 TGAATTTTCTGCTGTTAGACACTGAAT 59.771 33.333 0.00 0.00 0.00 2.57
3038 3339 6.942532 TTTTCTGCTGTTAGACACTGAATT 57.057 33.333 0.00 0.00 0.00 2.17
3039 3340 6.942532 TTTCTGCTGTTAGACACTGAATTT 57.057 33.333 0.00 0.00 0.00 1.82
3040 3341 6.545504 TTCTGCTGTTAGACACTGAATTTC 57.454 37.500 0.00 0.00 0.00 2.17
3041 3342 5.610398 TCTGCTGTTAGACACTGAATTTCA 58.390 37.500 0.00 0.00 0.00 2.69
3042 3343 6.054941 TCTGCTGTTAGACACTGAATTTCAA 58.945 36.000 0.01 0.00 0.00 2.69
3043 3344 6.712095 TCTGCTGTTAGACACTGAATTTCAAT 59.288 34.615 0.01 0.00 0.00 2.57
3044 3345 6.902341 TGCTGTTAGACACTGAATTTCAATC 58.098 36.000 0.01 0.00 0.00 2.67
3045 3346 6.072508 TGCTGTTAGACACTGAATTTCAATCC 60.073 38.462 0.01 0.00 0.00 3.01
3046 3347 6.623767 GCTGTTAGACACTGAATTTCAATCCC 60.624 42.308 0.01 0.00 0.00 3.85
3047 3348 5.710099 TGTTAGACACTGAATTTCAATCCCC 59.290 40.000 0.01 0.00 0.00 4.81
3048 3349 4.387026 AGACACTGAATTTCAATCCCCA 57.613 40.909 0.01 0.00 0.00 4.96
3049 3350 4.082125 AGACACTGAATTTCAATCCCCAC 58.918 43.478 0.01 0.00 0.00 4.61
3050 3351 4.082125 GACACTGAATTTCAATCCCCACT 58.918 43.478 0.01 0.00 0.00 4.00
3051 3352 4.482990 ACACTGAATTTCAATCCCCACTT 58.517 39.130 0.01 0.00 0.00 3.16
3052 3353 4.281688 ACACTGAATTTCAATCCCCACTTG 59.718 41.667 0.01 0.00 0.00 3.16
3053 3354 4.281688 CACTGAATTTCAATCCCCACTTGT 59.718 41.667 0.01 0.00 0.00 3.16
3054 3355 4.281688 ACTGAATTTCAATCCCCACTTGTG 59.718 41.667 0.01 0.00 0.00 3.33
3055 3356 3.006752 TGAATTTCAATCCCCACTTGTGC 59.993 43.478 0.00 0.00 0.00 4.57
3056 3357 2.079170 TTTCAATCCCCACTTGTGCA 57.921 45.000 0.00 0.00 0.00 4.57
3057 3358 1.619654 TTCAATCCCCACTTGTGCAG 58.380 50.000 0.00 0.00 0.00 4.41
3058 3359 0.478072 TCAATCCCCACTTGTGCAGT 59.522 50.000 0.00 0.00 35.35 4.40
3059 3360 1.133513 TCAATCCCCACTTGTGCAGTT 60.134 47.619 0.00 0.00 30.92 3.16
3060 3361 2.107378 TCAATCCCCACTTGTGCAGTTA 59.893 45.455 0.00 0.00 30.92 2.24
3061 3362 2.489329 CAATCCCCACTTGTGCAGTTAG 59.511 50.000 0.00 0.00 30.92 2.34
3062 3363 1.136828 TCCCCACTTGTGCAGTTAGT 58.863 50.000 0.00 0.00 30.92 2.24
3063 3364 2.331166 TCCCCACTTGTGCAGTTAGTA 58.669 47.619 0.00 0.00 30.92 1.82
3064 3365 2.910319 TCCCCACTTGTGCAGTTAGTAT 59.090 45.455 0.00 0.00 30.92 2.12
3065 3366 3.329520 TCCCCACTTGTGCAGTTAGTATT 59.670 43.478 0.00 0.00 30.92 1.89
3066 3367 4.079253 CCCCACTTGTGCAGTTAGTATTT 58.921 43.478 0.00 0.00 30.92 1.40
3067 3368 4.522789 CCCCACTTGTGCAGTTAGTATTTT 59.477 41.667 0.00 0.00 30.92 1.82
3068 3369 5.010617 CCCCACTTGTGCAGTTAGTATTTTT 59.989 40.000 0.00 0.00 30.92 1.94
3069 3370 5.920273 CCCACTTGTGCAGTTAGTATTTTTG 59.080 40.000 0.00 0.00 30.92 2.44
3070 3371 5.920273 CCACTTGTGCAGTTAGTATTTTTGG 59.080 40.000 0.00 0.00 30.92 3.28
3071 3372 5.920273 CACTTGTGCAGTTAGTATTTTTGGG 59.080 40.000 0.00 0.00 30.92 4.12
3072 3373 5.830991 ACTTGTGCAGTTAGTATTTTTGGGA 59.169 36.000 0.00 0.00 27.32 4.37
3073 3374 5.699097 TGTGCAGTTAGTATTTTTGGGAC 57.301 39.130 0.00 0.00 0.00 4.46
3074 3375 4.214545 TGTGCAGTTAGTATTTTTGGGACG 59.785 41.667 0.00 0.00 0.00 4.79
3075 3376 3.754323 TGCAGTTAGTATTTTTGGGACGG 59.246 43.478 0.00 0.00 0.00 4.79
3076 3377 4.004982 GCAGTTAGTATTTTTGGGACGGA 58.995 43.478 0.00 0.00 0.00 4.69
3077 3378 4.094442 GCAGTTAGTATTTTTGGGACGGAG 59.906 45.833 0.00 0.00 0.00 4.63
3078 3379 4.634443 CAGTTAGTATTTTTGGGACGGAGG 59.366 45.833 0.00 0.00 0.00 4.30
3079 3380 2.801077 AGTATTTTTGGGACGGAGGG 57.199 50.000 0.00 0.00 0.00 4.30
3080 3381 2.271777 AGTATTTTTGGGACGGAGGGA 58.728 47.619 0.00 0.00 0.00 4.20
3081 3382 2.238898 AGTATTTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
3082 3383 1.073098 ATTTTTGGGACGGAGGGAGT 58.927 50.000 0.00 0.00 0.00 3.85
3083 3384 1.732117 TTTTTGGGACGGAGGGAGTA 58.268 50.000 0.00 0.00 0.00 2.59
3084 3385 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
3085 3386 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
3086 3387 1.002069 TTGGGACGGAGGGAGTACTA 58.998 55.000 0.00 0.00 0.00 1.82
3087 3388 1.229131 TGGGACGGAGGGAGTACTAT 58.771 55.000 0.00 0.00 0.00 2.12
3088 3389 2.421725 TGGGACGGAGGGAGTACTATA 58.578 52.381 0.00 0.00 0.00 1.31
3089 3390 2.374504 TGGGACGGAGGGAGTACTATAG 59.625 54.545 0.00 0.00 0.00 1.31
3090 3391 2.374839 GGGACGGAGGGAGTACTATAGT 59.625 54.545 10.87 10.87 0.00 2.12
3091 3392 3.410508 GGACGGAGGGAGTACTATAGTG 58.589 54.545 15.90 0.00 0.00 2.74
3092 3393 3.181446 GGACGGAGGGAGTACTATAGTGT 60.181 52.174 15.90 2.40 0.00 3.55
3093 3394 3.814283 GACGGAGGGAGTACTATAGTGTG 59.186 52.174 15.90 0.00 0.00 3.82
3094 3395 2.553172 CGGAGGGAGTACTATAGTGTGC 59.447 54.545 15.90 7.72 0.00 4.57
3095 3396 2.892215 GGAGGGAGTACTATAGTGTGCC 59.108 54.545 15.90 15.82 0.00 5.01
3096 3397 3.436761 GGAGGGAGTACTATAGTGTGCCT 60.437 52.174 22.50 22.50 37.03 4.75
3097 3398 4.216708 GAGGGAGTACTATAGTGTGCCTT 58.783 47.826 22.92 14.43 35.38 4.35
3098 3399 4.621769 AGGGAGTACTATAGTGTGCCTTT 58.378 43.478 18.83 4.65 32.74 3.11
3099 3400 5.030820 AGGGAGTACTATAGTGTGCCTTTT 58.969 41.667 18.83 4.10 32.74 2.27
3100 3401 5.104900 AGGGAGTACTATAGTGTGCCTTTTG 60.105 44.000 18.83 0.00 32.74 2.44
3101 3402 5.338137 GGGAGTACTATAGTGTGCCTTTTGT 60.338 44.000 15.90 0.00 0.00 2.83
3102 3403 5.581085 GGAGTACTATAGTGTGCCTTTTGTG 59.419 44.000 15.90 0.00 0.00 3.33
3103 3404 4.935808 AGTACTATAGTGTGCCTTTTGTGC 59.064 41.667 15.90 0.00 0.00 4.57
3104 3405 4.021102 ACTATAGTGTGCCTTTTGTGCT 57.979 40.909 4.10 0.00 0.00 4.40
3105 3406 4.398319 ACTATAGTGTGCCTTTTGTGCTT 58.602 39.130 4.10 0.00 0.00 3.91
3106 3407 5.556915 ACTATAGTGTGCCTTTTGTGCTTA 58.443 37.500 4.10 0.00 0.00 3.09
3107 3408 6.001460 ACTATAGTGTGCCTTTTGTGCTTAA 58.999 36.000 4.10 0.00 0.00 1.85
3108 3409 5.982890 ATAGTGTGCCTTTTGTGCTTAAT 57.017 34.783 0.00 0.00 0.00 1.40
3109 3410 4.243007 AGTGTGCCTTTTGTGCTTAATC 57.757 40.909 0.00 0.00 0.00 1.75
3110 3411 3.636300 AGTGTGCCTTTTGTGCTTAATCA 59.364 39.130 0.00 0.00 0.00 2.57
3111 3412 3.735746 GTGTGCCTTTTGTGCTTAATCAC 59.264 43.478 2.44 2.44 37.48 3.06
3112 3413 3.243704 TGTGCCTTTTGTGCTTAATCACC 60.244 43.478 6.97 0.00 36.17 4.02
3113 3414 2.961741 TGCCTTTTGTGCTTAATCACCA 59.038 40.909 6.97 0.00 36.17 4.17
3114 3415 3.005684 TGCCTTTTGTGCTTAATCACCAG 59.994 43.478 6.97 1.29 36.17 4.00
3115 3416 3.255642 GCCTTTTGTGCTTAATCACCAGA 59.744 43.478 6.97 0.00 36.17 3.86
3116 3417 4.261994 GCCTTTTGTGCTTAATCACCAGAA 60.262 41.667 6.97 0.00 36.17 3.02
3117 3418 5.567423 GCCTTTTGTGCTTAATCACCAGAAT 60.567 40.000 6.97 0.00 36.17 2.40
3118 3419 6.458210 CCTTTTGTGCTTAATCACCAGAATT 58.542 36.000 6.97 0.00 36.17 2.17
3119 3420 7.601856 CCTTTTGTGCTTAATCACCAGAATTA 58.398 34.615 6.97 0.00 36.17 1.40
3120 3421 8.087750 CCTTTTGTGCTTAATCACCAGAATTAA 58.912 33.333 6.97 0.00 36.17 1.40
3121 3422 9.643693 CTTTTGTGCTTAATCACCAGAATTAAT 57.356 29.630 6.97 0.00 36.17 1.40
3124 3425 9.461312 TTGTGCTTAATCACCAGAATTAATAGT 57.539 29.630 6.97 0.00 36.17 2.12
3125 3426 9.109393 TGTGCTTAATCACCAGAATTAATAGTC 57.891 33.333 6.97 0.00 36.17 2.59
3126 3427 9.331282 GTGCTTAATCACCAGAATTAATAGTCT 57.669 33.333 0.00 0.00 0.00 3.24
3127 3428 9.330063 TGCTTAATCACCAGAATTAATAGTCTG 57.670 33.333 9.37 9.37 44.11 3.51
3134 3435 4.058817 CAGAATTAATAGTCTGGGACGGC 58.941 47.826 8.67 0.00 41.55 5.68
3135 3436 2.814280 ATTAATAGTCTGGGACGGCG 57.186 50.000 4.80 4.80 37.67 6.46
3136 3437 1.477553 TTAATAGTCTGGGACGGCGT 58.522 50.000 14.65 14.65 37.67 5.68
3137 3438 2.346766 TAATAGTCTGGGACGGCGTA 57.653 50.000 14.74 0.00 37.67 4.42
3138 3439 1.030457 AATAGTCTGGGACGGCGTAG 58.970 55.000 14.74 7.35 37.67 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.481128 CCAAACCACACCCTAACCCT 59.519 55.000 0.00 0.00 0.00 4.34
1 2 0.541063 CCCAAACCACACCCTAACCC 60.541 60.000 0.00 0.00 0.00 4.11
2 3 0.541063 CCCCAAACCACACCCTAACC 60.541 60.000 0.00 0.00 0.00 2.85
3 4 0.186630 ACCCCAAACCACACCCTAAC 59.813 55.000 0.00 0.00 0.00 2.34
4 5 0.479378 GACCCCAAACCACACCCTAA 59.521 55.000 0.00 0.00 0.00 2.69
5 6 1.770749 CGACCCCAAACCACACCCTA 61.771 60.000 0.00 0.00 0.00 3.53
6 7 2.931921 GACCCCAAACCACACCCT 59.068 61.111 0.00 0.00 0.00 4.34
7 8 2.596338 CGACCCCAAACCACACCC 60.596 66.667 0.00 0.00 0.00 4.61
8 9 2.596338 CCGACCCCAAACCACACC 60.596 66.667 0.00 0.00 0.00 4.16
9 10 1.599797 CTCCGACCCCAAACCACAC 60.600 63.158 0.00 0.00 0.00 3.82
10 11 2.833227 CTCCGACCCCAAACCACA 59.167 61.111 0.00 0.00 0.00 4.17
11 12 2.671963 GCTCCGACCCCAAACCAC 60.672 66.667 0.00 0.00 0.00 4.16
12 13 4.323477 CGCTCCGACCCCAAACCA 62.323 66.667 0.00 0.00 0.00 3.67
32 33 1.656652 CAAACAGGGCAGATCCGTAG 58.343 55.000 0.00 0.00 34.94 3.51
33 34 0.392461 GCAAACAGGGCAGATCCGTA 60.392 55.000 0.00 0.00 34.94 4.02
34 35 1.675641 GCAAACAGGGCAGATCCGT 60.676 57.895 0.00 0.00 34.94 4.69
35 36 2.409870 GGCAAACAGGGCAGATCCG 61.410 63.158 0.00 0.00 34.94 4.18
36 37 1.304381 TGGCAAACAGGGCAGATCC 60.304 57.895 0.00 0.00 38.55 3.36
37 38 2.899887 CCATGGCAAACAGGGCAGATC 61.900 57.143 0.00 0.00 45.06 2.75
38 39 0.974010 CCATGGCAAACAGGGCAGAT 60.974 55.000 0.00 0.00 45.06 2.90
39 40 1.607178 CCATGGCAAACAGGGCAGA 60.607 57.895 0.00 0.00 45.06 4.26
40 41 2.975536 CCATGGCAAACAGGGCAG 59.024 61.111 0.00 0.00 45.06 4.85
51 52 2.042639 ATCCCTGGTTGCCATGGC 60.043 61.111 30.54 30.54 38.85 4.40
52 53 1.759299 CCATCCCTGGTTGCCATGG 60.759 63.158 7.63 7.63 40.07 3.66
53 54 2.428925 GCCATCCCTGGTTGCCATG 61.429 63.158 0.00 0.00 45.10 3.66
54 55 2.042639 GCCATCCCTGGTTGCCAT 60.043 61.111 0.00 0.00 45.10 4.40
55 56 4.380945 GGCCATCCCTGGTTGCCA 62.381 66.667 0.00 0.00 45.10 4.92
65 66 4.335647 ATCCATCGCCGGCCATCC 62.336 66.667 23.46 0.00 0.00 3.51
66 67 3.052082 CATCCATCGCCGGCCATC 61.052 66.667 23.46 0.00 0.00 3.51
67 68 3.832237 GACATCCATCGCCGGCCAT 62.832 63.158 23.46 11.92 0.00 4.40
68 69 4.545706 GACATCCATCGCCGGCCA 62.546 66.667 23.46 9.24 0.00 5.36
71 72 4.969196 CCCGACATCCATCGCCGG 62.969 72.222 0.00 0.00 40.87 6.13
72 73 4.969196 CCCCGACATCCATCGCCG 62.969 72.222 0.00 0.00 40.87 6.46
73 74 3.400599 AACCCCGACATCCATCGCC 62.401 63.158 0.00 0.00 40.87 5.54
74 75 1.887707 GAACCCCGACATCCATCGC 60.888 63.158 0.00 0.00 40.87 4.58
75 76 1.591594 CGAACCCCGACATCCATCG 60.592 63.158 0.00 0.00 41.76 3.84
76 77 0.249489 CTCGAACCCCGACATCCATC 60.249 60.000 0.00 0.00 43.23 3.51
77 78 0.686441 TCTCGAACCCCGACATCCAT 60.686 55.000 0.00 0.00 43.23 3.41
78 79 1.304630 TCTCGAACCCCGACATCCA 60.305 57.895 0.00 0.00 43.23 3.41
79 80 1.437986 CTCTCGAACCCCGACATCC 59.562 63.158 0.00 0.00 43.23 3.51
80 81 1.321074 ACCTCTCGAACCCCGACATC 61.321 60.000 0.00 0.00 43.23 3.06
81 82 1.305046 ACCTCTCGAACCCCGACAT 60.305 57.895 0.00 0.00 43.23 3.06
82 83 2.116772 ACCTCTCGAACCCCGACA 59.883 61.111 0.00 0.00 43.23 4.35
83 84 2.572284 CACCTCTCGAACCCCGAC 59.428 66.667 0.00 0.00 43.23 4.79
84 85 2.678934 CCACCTCTCGAACCCCGA 60.679 66.667 0.00 0.00 46.35 5.14
85 86 3.771160 CCCACCTCTCGAACCCCG 61.771 72.222 0.00 0.00 40.25 5.73
86 87 3.400054 CCCCACCTCTCGAACCCC 61.400 72.222 0.00 0.00 0.00 4.95
87 88 3.400054 CCCCCACCTCTCGAACCC 61.400 72.222 0.00 0.00 0.00 4.11
88 89 2.284405 TCCCCCACCTCTCGAACC 60.284 66.667 0.00 0.00 0.00 3.62
89 90 2.979649 GTCCCCCACCTCTCGAAC 59.020 66.667 0.00 0.00 0.00 3.95
90 91 2.509931 ATCGTCCCCCACCTCTCGAA 62.510 60.000 0.00 0.00 0.00 3.71
91 92 2.992576 ATCGTCCCCCACCTCTCGA 61.993 63.158 0.00 0.00 0.00 4.04
92 93 2.442272 ATCGTCCCCCACCTCTCG 60.442 66.667 0.00 0.00 0.00 4.04
93 94 2.435693 CCATCGTCCCCCACCTCTC 61.436 68.421 0.00 0.00 0.00 3.20
94 95 2.365635 CCATCGTCCCCCACCTCT 60.366 66.667 0.00 0.00 0.00 3.69
95 96 4.176752 GCCATCGTCCCCCACCTC 62.177 72.222 0.00 0.00 0.00 3.85
104 105 4.541482 TCGTACGCCGCCATCGTC 62.541 66.667 11.24 0.00 40.89 4.20
105 106 4.547905 CTCGTACGCCGCCATCGT 62.548 66.667 11.24 0.00 43.20 3.73
106 107 4.246206 TCTCGTACGCCGCCATCG 62.246 66.667 11.24 0.00 36.19 3.84
107 108 2.353607 CTCTCGTACGCCGCCATC 60.354 66.667 11.24 0.00 36.19 3.51
108 109 2.827190 TCTCTCGTACGCCGCCAT 60.827 61.111 11.24 0.00 36.19 4.40
109 110 3.506096 CTCTCTCGTACGCCGCCA 61.506 66.667 11.24 0.00 36.19 5.69
110 111 4.253257 CCTCTCTCGTACGCCGCC 62.253 72.222 11.24 0.00 36.19 6.13
111 112 4.253257 CCCTCTCTCGTACGCCGC 62.253 72.222 11.24 0.00 36.19 6.53
112 113 3.584052 CCCCTCTCTCGTACGCCG 61.584 72.222 11.24 4.12 38.13 6.46
113 114 1.528776 ATCCCCTCTCTCGTACGCC 60.529 63.158 11.24 0.00 0.00 5.68
114 115 1.655329 CATCCCCTCTCTCGTACGC 59.345 63.158 11.24 0.00 0.00 4.42
115 116 0.179026 TCCATCCCCTCTCTCGTACG 60.179 60.000 9.53 9.53 0.00 3.67
116 117 2.164338 GATCCATCCCCTCTCTCGTAC 58.836 57.143 0.00 0.00 0.00 3.67
117 118 1.271434 CGATCCATCCCCTCTCTCGTA 60.271 57.143 0.00 0.00 0.00 3.43
118 119 0.538516 CGATCCATCCCCTCTCTCGT 60.539 60.000 0.00 0.00 0.00 4.18
119 120 1.247419 CCGATCCATCCCCTCTCTCG 61.247 65.000 0.00 0.00 0.00 4.04
120 121 0.113385 TCCGATCCATCCCCTCTCTC 59.887 60.000 0.00 0.00 0.00 3.20
121 122 0.114168 CTCCGATCCATCCCCTCTCT 59.886 60.000 0.00 0.00 0.00 3.10
122 123 0.902516 CCTCCGATCCATCCCCTCTC 60.903 65.000 0.00 0.00 0.00 3.20
123 124 1.157276 CCTCCGATCCATCCCCTCT 59.843 63.158 0.00 0.00 0.00 3.69
124 125 2.588201 GCCTCCGATCCATCCCCTC 61.588 68.421 0.00 0.00 0.00 4.30
125 126 2.527875 GCCTCCGATCCATCCCCT 60.528 66.667 0.00 0.00 0.00 4.79
126 127 4.008933 CGCCTCCGATCCATCCCC 62.009 72.222 0.00 0.00 36.29 4.81
127 128 3.234730 ACGCCTCCGATCCATCCC 61.235 66.667 0.00 0.00 38.29 3.85
128 129 2.029666 CACGCCTCCGATCCATCC 59.970 66.667 0.00 0.00 38.29 3.51
129 130 1.821061 ATCCACGCCTCCGATCCATC 61.821 60.000 0.00 0.00 38.29 3.51
130 131 1.821061 GATCCACGCCTCCGATCCAT 61.821 60.000 0.00 0.00 38.29 3.41
131 132 2.443952 ATCCACGCCTCCGATCCA 60.444 61.111 0.00 0.00 38.29 3.41
132 133 2.340443 GATCCACGCCTCCGATCC 59.660 66.667 0.00 0.00 38.29 3.36
133 134 2.049985 CGATCCACGCCTCCGATC 60.050 66.667 0.00 0.00 38.29 3.69
134 135 3.606662 CCGATCCACGCCTCCGAT 61.607 66.667 0.00 0.00 41.07 4.18
137 138 4.899239 CAGCCGATCCACGCCTCC 62.899 72.222 0.00 0.00 41.07 4.30
138 139 4.899239 CCAGCCGATCCACGCCTC 62.899 72.222 0.00 0.00 41.07 4.70
142 143 4.873129 CGACCCAGCCGATCCACG 62.873 72.222 0.00 0.00 42.18 4.94
143 144 3.771160 ACGACCCAGCCGATCCAC 61.771 66.667 0.00 0.00 0.00 4.02
144 145 3.770040 CACGACCCAGCCGATCCA 61.770 66.667 0.00 0.00 0.00 3.41
163 164 2.597510 ACAAAAGACCGGCTGCCC 60.598 61.111 14.12 0.00 0.00 5.36
164 165 2.626780 GGACAAAAGACCGGCTGCC 61.627 63.158 9.11 9.11 0.00 4.85
165 166 2.626780 GGGACAAAAGACCGGCTGC 61.627 63.158 0.00 0.00 0.00 5.25
166 167 2.325082 CGGGACAAAAGACCGGCTG 61.325 63.158 0.00 0.00 43.69 4.85
167 168 2.032071 CGGGACAAAAGACCGGCT 59.968 61.111 0.00 0.00 43.69 5.52
170 171 2.025418 CGTCCGGGACAAAAGACCG 61.025 63.158 25.80 6.51 46.79 4.79
171 172 1.670083 CCGTCCGGGACAAAAGACC 60.670 63.158 25.80 0.00 38.47 3.85
172 173 3.961729 CCGTCCGGGACAAAAGAC 58.038 61.111 25.80 0.00 38.47 3.01
200 201 3.747976 GGTGTGTGGCAATCCCGC 61.748 66.667 0.00 0.00 44.67 6.13
201 202 3.430862 CGGTGTGTGGCAATCCCG 61.431 66.667 0.00 0.00 35.87 5.14
202 203 3.061848 CCGGTGTGTGGCAATCCC 61.062 66.667 0.00 0.00 0.00 3.85
203 204 2.033448 TCCGGTGTGTGGCAATCC 59.967 61.111 0.00 0.00 0.00 3.01
204 205 2.677003 CGTCCGGTGTGTGGCAATC 61.677 63.158 0.00 0.00 0.00 2.67
205 206 2.668212 CGTCCGGTGTGTGGCAAT 60.668 61.111 0.00 0.00 0.00 3.56
206 207 4.164087 ACGTCCGGTGTGTGGCAA 62.164 61.111 0.00 0.00 0.00 4.52
207 208 4.901123 CACGTCCGGTGTGTGGCA 62.901 66.667 17.74 0.00 41.89 4.92
222 223 4.999939 CAAAAGCACGGCCCGCAC 63.000 66.667 13.92 0.00 0.00 5.34
224 225 4.999939 CACAAAAGCACGGCCCGC 63.000 66.667 1.23 3.54 0.00 6.13
225 226 4.999939 GCACAAAAGCACGGCCCG 63.000 66.667 0.00 0.00 0.00 6.13
226 227 4.999939 CGCACAAAAGCACGGCCC 63.000 66.667 0.00 0.00 0.00 5.80
228 229 4.629115 AGCGCACAAAAGCACGGC 62.629 61.111 11.47 0.00 35.48 5.68
229 230 2.427410 GAGCGCACAAAAGCACGG 60.427 61.111 11.47 0.00 35.48 4.94
230 231 2.792543 CGAGCGCACAAAAGCACG 60.793 61.111 11.47 0.00 40.48 5.34
231 232 2.427410 CCGAGCGCACAAAAGCAC 60.427 61.111 11.47 0.00 35.48 4.40
232 233 2.590291 TCCGAGCGCACAAAAGCA 60.590 55.556 11.47 0.00 35.48 3.91
233 234 2.127232 GTCCGAGCGCACAAAAGC 60.127 61.111 11.47 0.00 0.00 3.51
234 235 2.170985 CGTCCGAGCGCACAAAAG 59.829 61.111 11.47 0.00 0.00 2.27
235 236 2.586635 ACGTCCGAGCGCACAAAA 60.587 55.556 11.47 0.00 34.88 2.44
236 237 3.334751 CACGTCCGAGCGCACAAA 61.335 61.111 11.47 0.00 34.88 2.83
264 265 2.657237 GGCATAGACGGGGATCGG 59.343 66.667 0.00 0.00 44.45 4.18
265 266 2.258591 CGGCATAGACGGGGATCG 59.741 66.667 0.00 0.00 45.88 3.69
266 267 2.048127 GCGGCATAGACGGGGATC 60.048 66.667 0.00 0.00 32.98 3.36
267 268 2.842462 TGCGGCATAGACGGGGAT 60.842 61.111 0.00 0.00 32.98 3.85
268 269 3.845259 GTGCGGCATAGACGGGGA 61.845 66.667 5.72 0.00 32.98 4.81
270 271 4.201679 TCGTGCGGCATAGACGGG 62.202 66.667 5.72 0.00 32.98 5.28
271 272 2.655364 CTCGTGCGGCATAGACGG 60.655 66.667 5.72 0.00 32.98 4.79
272 273 2.655364 CCTCGTGCGGCATAGACG 60.655 66.667 5.72 5.03 36.98 4.18
291 292 4.171103 ATAGGAACCCGCCCGCAC 62.171 66.667 0.00 0.00 0.00 5.34
292 293 3.857038 GATAGGAACCCGCCCGCA 61.857 66.667 0.00 0.00 0.00 5.69
293 294 4.963428 CGATAGGAACCCGCCCGC 62.963 72.222 0.00 0.00 0.00 6.13
294 295 3.221389 TCGATAGGAACCCGCCCG 61.221 66.667 0.00 0.00 0.00 6.13
295 296 2.420466 GTCGATAGGAACCCGCCC 59.580 66.667 0.00 0.00 0.00 6.13
296 297 2.027169 CGTCGATAGGAACCCGCC 59.973 66.667 0.00 0.00 0.00 6.13
297 298 2.657620 GCGTCGATAGGAACCCGC 60.658 66.667 0.00 0.00 0.00 6.13
298 299 2.027169 GGCGTCGATAGGAACCCG 59.973 66.667 0.00 0.00 0.00 5.28
299 300 1.227176 GTGGCGTCGATAGGAACCC 60.227 63.158 0.00 0.00 0.00 4.11
300 301 0.804933 GTGTGGCGTCGATAGGAACC 60.805 60.000 0.00 0.00 0.00 3.62
301 302 1.138047 CGTGTGGCGTCGATAGGAAC 61.138 60.000 0.00 0.00 35.54 3.62
302 303 1.138036 CGTGTGGCGTCGATAGGAA 59.862 57.895 0.00 0.00 35.54 3.36
303 304 2.795973 CGTGTGGCGTCGATAGGA 59.204 61.111 0.00 0.00 35.54 2.94
315 316 1.136363 CGAATAACTGCCACACGTGTG 60.136 52.381 36.13 36.13 45.23 3.82
316 317 1.144969 CGAATAACTGCCACACGTGT 58.855 50.000 17.22 17.22 0.00 4.49
317 318 0.442310 CCGAATAACTGCCACACGTG 59.558 55.000 15.48 15.48 0.00 4.49
318 319 0.319083 TCCGAATAACTGCCACACGT 59.681 50.000 0.00 0.00 0.00 4.49
319 320 0.719465 GTCCGAATAACTGCCACACG 59.281 55.000 0.00 0.00 0.00 4.49
320 321 1.084289 GGTCCGAATAACTGCCACAC 58.916 55.000 0.00 0.00 0.00 3.82
321 322 0.035820 GGGTCCGAATAACTGCCACA 60.036 55.000 0.00 0.00 0.00 4.17
322 323 0.252197 AGGGTCCGAATAACTGCCAC 59.748 55.000 0.00 0.00 0.00 5.01
323 324 0.988832 AAGGGTCCGAATAACTGCCA 59.011 50.000 0.00 0.00 0.00 4.92
324 325 2.994186 TAAGGGTCCGAATAACTGCC 57.006 50.000 0.00 0.00 0.00 4.85
325 326 5.632244 TTTTTAAGGGTCCGAATAACTGC 57.368 39.130 0.00 0.00 0.00 4.40
326 327 7.282450 AGCTATTTTTAAGGGTCCGAATAACTG 59.718 37.037 0.00 0.00 0.00 3.16
327 328 7.344134 AGCTATTTTTAAGGGTCCGAATAACT 58.656 34.615 0.00 0.00 0.00 2.24
328 329 7.563888 AGCTATTTTTAAGGGTCCGAATAAC 57.436 36.000 0.00 0.00 0.00 1.89
329 330 9.280174 CATAGCTATTTTTAAGGGTCCGAATAA 57.720 33.333 2.64 0.00 0.00 1.40
330 331 7.881232 CCATAGCTATTTTTAAGGGTCCGAATA 59.119 37.037 2.64 0.00 0.00 1.75
331 332 6.715264 CCATAGCTATTTTTAAGGGTCCGAAT 59.285 38.462 2.64 0.00 0.00 3.34
332 333 6.059484 CCATAGCTATTTTTAAGGGTCCGAA 58.941 40.000 2.64 0.00 0.00 4.30
333 334 5.367352 TCCATAGCTATTTTTAAGGGTCCGA 59.633 40.000 2.64 0.00 0.00 4.55
334 335 5.617252 TCCATAGCTATTTTTAAGGGTCCG 58.383 41.667 2.64 0.00 0.00 4.79
335 336 7.891498 TTTCCATAGCTATTTTTAAGGGTCC 57.109 36.000 2.64 0.00 0.00 4.46
336 337 9.582431 GTTTTTCCATAGCTATTTTTAAGGGTC 57.418 33.333 2.64 0.00 0.00 4.46
337 338 9.095700 TGTTTTTCCATAGCTATTTTTAAGGGT 57.904 29.630 2.64 0.00 0.00 4.34
338 339 9.936759 TTGTTTTTCCATAGCTATTTTTAAGGG 57.063 29.630 2.64 0.37 0.00 3.95
343 344 9.150348 CCGATTTGTTTTTCCATAGCTATTTTT 57.850 29.630 2.64 0.00 0.00 1.94
344 345 8.527810 TCCGATTTGTTTTTCCATAGCTATTTT 58.472 29.630 2.64 0.00 0.00 1.82
345 346 8.062065 TCCGATTTGTTTTTCCATAGCTATTT 57.938 30.769 2.64 0.00 0.00 1.40
346 347 7.639113 TCCGATTTGTTTTTCCATAGCTATT 57.361 32.000 2.64 0.00 0.00 1.73
347 348 7.639113 TTCCGATTTGTTTTTCCATAGCTAT 57.361 32.000 0.00 0.00 0.00 2.97
348 349 7.639113 ATTCCGATTTGTTTTTCCATAGCTA 57.361 32.000 0.00 0.00 0.00 3.32
349 350 5.975693 TTCCGATTTGTTTTTCCATAGCT 57.024 34.783 0.00 0.00 0.00 3.32
350 351 6.811170 TCAATTCCGATTTGTTTTTCCATAGC 59.189 34.615 3.57 0.00 0.00 2.97
351 352 8.931385 ATCAATTCCGATTTGTTTTTCCATAG 57.069 30.769 3.57 0.00 0.00 2.23
352 353 8.748412 AGATCAATTCCGATTTGTTTTTCCATA 58.252 29.630 0.00 0.00 0.00 2.74
353 354 7.614494 AGATCAATTCCGATTTGTTTTTCCAT 58.386 30.769 0.00 0.00 0.00 3.41
354 355 6.991938 AGATCAATTCCGATTTGTTTTTCCA 58.008 32.000 0.00 0.00 0.00 3.53
355 356 7.889589 AAGATCAATTCCGATTTGTTTTTCC 57.110 32.000 0.00 0.00 0.00 3.13
389 390 9.394767 GGTTTTTCCATAGCCATTTTCAAATAT 57.605 29.630 0.00 0.00 35.97 1.28
390 391 8.378565 TGGTTTTTCCATAGCCATTTTCAAATA 58.621 29.630 0.00 0.00 41.93 1.40
391 392 7.230027 TGGTTTTTCCATAGCCATTTTCAAAT 58.770 30.769 0.00 0.00 41.93 2.32
401 402 2.100749 CCCGATTGGTTTTTCCATAGCC 59.899 50.000 0.00 0.00 46.60 3.93
413 418 7.792364 TGTATAAAGATCTATCCCGATTGGT 57.208 36.000 0.00 0.00 34.77 3.67
479 487 2.095461 GAAAAGGAGGCTGGATGGAAC 58.905 52.381 0.00 0.00 0.00 3.62
501 509 3.896888 ACCATGGCATCTCTGTTTCAAAA 59.103 39.130 13.04 0.00 0.00 2.44
505 513 3.873952 GTCTACCATGGCATCTCTGTTTC 59.126 47.826 13.04 0.00 0.00 2.78
506 514 3.370953 GGTCTACCATGGCATCTCTGTTT 60.371 47.826 13.04 0.00 35.64 2.83
507 515 2.171448 GGTCTACCATGGCATCTCTGTT 59.829 50.000 13.04 0.00 35.64 3.16
509 517 1.269988 CGGTCTACCATGGCATCTCTG 60.270 57.143 13.04 0.26 35.14 3.35
511 519 0.034059 CCGGTCTACCATGGCATCTC 59.966 60.000 13.04 0.00 35.14 2.75
535 543 0.672711 GTTAACCGAGCCAGGACCAC 60.673 60.000 1.68 0.00 34.73 4.16
573 583 1.005347 GTGTACGCGGGAATCAATTCG 60.005 52.381 12.47 0.00 37.67 3.34
575 585 1.375551 GGTGTACGCGGGAATCAATT 58.624 50.000 12.47 0.00 0.00 2.32
596 606 2.276309 GAGGGGGAGGTTGCTGGATG 62.276 65.000 0.00 0.00 0.00 3.51
646 656 1.303643 GGTTTCTGTGGGCAGGGAG 60.304 63.158 0.00 0.00 42.78 4.30
649 659 1.463553 GGTTGGTTTCTGTGGGCAGG 61.464 60.000 0.00 0.00 42.78 4.85
790 800 1.905512 GGACGGTTGGTAGGATGCT 59.094 57.895 0.00 0.00 0.00 3.79
794 804 1.952102 GCATCGGACGGTTGGTAGGA 61.952 60.000 0.00 0.00 0.00 2.94
795 805 1.520787 GCATCGGACGGTTGGTAGG 60.521 63.158 0.00 0.00 0.00 3.18
797 807 2.182284 CGCATCGGACGGTTGGTA 59.818 61.111 0.00 0.00 0.00 3.25
815 825 3.943691 CGTGGAACAACCCCGGGA 61.944 66.667 26.32 0.00 44.16 5.14
834 844 3.756783 CGAGGAGGGGAGGGAGGT 61.757 72.222 0.00 0.00 0.00 3.85
844 854 2.273912 GGCGGGGTATACGAGGAGG 61.274 68.421 0.00 0.00 0.00 4.30
923 933 4.567385 CTCTCTCTCTGGCGCGGC 62.567 72.222 27.61 27.61 0.00 6.53
924 934 2.826287 TCTCTCTCTCTGGCGCGG 60.826 66.667 8.83 0.00 0.00 6.46
1083 1102 0.254178 CCTTGATGGAGGACTGGTGG 59.746 60.000 0.00 0.00 39.25 4.61
1326 1345 1.379044 ACCGTACCCACCTCCGTAG 60.379 63.158 0.00 0.00 0.00 3.51
1970 1989 1.207593 GCCGCAGTTGTAGCAGTTG 59.792 57.895 0.00 0.00 0.00 3.16
2301 2571 1.068472 ACTTACTGACTTGCGGACGAG 60.068 52.381 0.00 0.00 0.00 4.18
2304 2574 2.288273 ACTGACTTACTGACTTGCGGAC 60.288 50.000 0.00 0.00 0.00 4.79
2305 2575 1.961394 ACTGACTTACTGACTTGCGGA 59.039 47.619 0.00 0.00 0.00 5.54
2306 2576 2.288213 TGACTGACTTACTGACTTGCGG 60.288 50.000 0.00 0.00 0.00 5.69
2307 2577 2.983136 CTGACTGACTTACTGACTTGCG 59.017 50.000 0.00 0.00 0.00 4.85
2308 2578 3.983741 ACTGACTGACTTACTGACTTGC 58.016 45.455 0.00 0.00 0.00 4.01
2309 2579 5.188327 TGACTGACTGACTTACTGACTTG 57.812 43.478 0.00 0.00 0.00 3.16
2310 2580 4.890581 ACTGACTGACTGACTTACTGACTT 59.109 41.667 0.00 0.00 0.00 3.01
2311 2581 4.465886 ACTGACTGACTGACTTACTGACT 58.534 43.478 0.00 0.00 0.00 3.41
2312 2582 4.320641 GGACTGACTGACTGACTTACTGAC 60.321 50.000 0.00 0.00 0.00 3.51
2313 2583 3.821600 GGACTGACTGACTGACTTACTGA 59.178 47.826 0.00 0.00 0.00 3.41
2314 2584 3.365465 CGGACTGACTGACTGACTTACTG 60.365 52.174 0.00 0.00 0.00 2.74
2315 2585 2.814919 CGGACTGACTGACTGACTTACT 59.185 50.000 0.00 0.00 0.00 2.24
2316 2586 2.553172 ACGGACTGACTGACTGACTTAC 59.447 50.000 0.00 0.00 0.00 2.34
2317 2587 2.552743 CACGGACTGACTGACTGACTTA 59.447 50.000 0.00 0.00 0.00 2.24
2318 2588 1.338337 CACGGACTGACTGACTGACTT 59.662 52.381 0.00 0.00 0.00 3.01
2489 2762 8.584157 TGATAACAACCAGCATCATTTTACTTT 58.416 29.630 0.00 0.00 0.00 2.66
2504 2778 6.558394 TCATGGATAGAGGATGATAACAACCA 59.442 38.462 2.13 0.00 40.71 3.67
2509 2786 6.925211 TCGTTCATGGATAGAGGATGATAAC 58.075 40.000 0.00 0.00 0.00 1.89
2521 2798 7.275183 ACAGAGAATTCAATCGTTCATGGATA 58.725 34.615 8.44 0.00 0.00 2.59
2524 2801 5.352293 TGACAGAGAATTCAATCGTTCATGG 59.648 40.000 8.44 0.00 0.00 3.66
2525 2802 6.312180 TCTGACAGAGAATTCAATCGTTCATG 59.688 38.462 8.44 0.00 0.00 3.07
2531 2816 8.815141 ATCTAATCTGACAGAGAATTCAATCG 57.185 34.615 11.52 0.00 33.12 3.34
2534 2819 9.199645 AGAGATCTAATCTGACAGAGAATTCAA 57.800 33.333 11.52 0.00 40.38 2.69
2552 2840 1.342374 TGCCACTGCAGGAGAGATCTA 60.342 52.381 19.93 0.00 44.23 1.98
2564 2852 3.323403 AGAGATAATAGTCCTGCCACTGC 59.677 47.826 0.00 0.00 38.26 4.40
2565 2853 4.021544 GGAGAGATAATAGTCCTGCCACTG 60.022 50.000 0.00 0.00 0.00 3.66
2571 2859 5.389520 TGACAGGGAGAGATAATAGTCCTG 58.610 45.833 0.00 0.00 44.07 3.86
2587 2875 8.469309 AATCAATTAATAACAGGATGACAGGG 57.531 34.615 0.00 0.00 39.69 4.45
2618 2913 9.220767 AGTTAATCATCTTCCAAACTGTACTTC 57.779 33.333 0.00 0.00 0.00 3.01
2649 2944 8.697507 AAAACCTCAGAAGATGAAAGTACAAT 57.302 30.769 0.00 0.00 37.52 2.71
2651 2946 7.468631 GCAAAAACCTCAGAAGATGAAAGTACA 60.469 37.037 0.00 0.00 37.52 2.90
2664 2962 0.821711 CCCCACGCAAAAACCTCAGA 60.822 55.000 0.00 0.00 0.00 3.27
2717 3016 5.064198 TCGCAAATCCAGTATAAACTTTCCG 59.936 40.000 0.00 0.00 31.97 4.30
2727 3026 3.904339 AGGGTAGATCGCAAATCCAGTAT 59.096 43.478 0.00 0.00 0.00 2.12
2773 3073 1.357420 TGACACCATTGCTTACCCCAT 59.643 47.619 0.00 0.00 0.00 4.00
2885 3186 1.117749 AGCAGAGCCAGACACAGTGA 61.118 55.000 7.81 0.00 0.00 3.41
2951 3252 9.947669 CAGCAATCCAAAAATAAATCACAAAAA 57.052 25.926 0.00 0.00 0.00 1.94
2952 3253 9.118300 ACAGCAATCCAAAAATAAATCACAAAA 57.882 25.926 0.00 0.00 0.00 2.44
2953 3254 8.674263 ACAGCAATCCAAAAATAAATCACAAA 57.326 26.923 0.00 0.00 0.00 2.83
2954 3255 8.557864 CAACAGCAATCCAAAAATAAATCACAA 58.442 29.630 0.00 0.00 0.00 3.33
2955 3256 7.714377 ACAACAGCAATCCAAAAATAAATCACA 59.286 29.630 0.00 0.00 0.00 3.58
2956 3257 8.011106 CACAACAGCAATCCAAAAATAAATCAC 58.989 33.333 0.00 0.00 0.00 3.06
2957 3258 7.930325 TCACAACAGCAATCCAAAAATAAATCA 59.070 29.630 0.00 0.00 0.00 2.57
2958 3259 8.309163 TCACAACAGCAATCCAAAAATAAATC 57.691 30.769 0.00 0.00 0.00 2.17
2959 3260 8.851541 ATCACAACAGCAATCCAAAAATAAAT 57.148 26.923 0.00 0.00 0.00 1.40
2960 3261 9.421806 CTATCACAACAGCAATCCAAAAATAAA 57.578 29.630 0.00 0.00 0.00 1.40
2961 3262 7.545265 GCTATCACAACAGCAATCCAAAAATAA 59.455 33.333 0.00 0.00 37.73 1.40
2962 3263 7.035004 GCTATCACAACAGCAATCCAAAAATA 58.965 34.615 0.00 0.00 37.73 1.40
2963 3264 5.870978 GCTATCACAACAGCAATCCAAAAAT 59.129 36.000 0.00 0.00 37.73 1.82
2964 3265 5.010922 AGCTATCACAACAGCAATCCAAAAA 59.989 36.000 0.00 0.00 40.36 1.94
2965 3266 4.523943 AGCTATCACAACAGCAATCCAAAA 59.476 37.500 0.00 0.00 40.36 2.44
2966 3267 4.081406 AGCTATCACAACAGCAATCCAAA 58.919 39.130 0.00 0.00 40.36 3.28
2967 3268 3.689347 AGCTATCACAACAGCAATCCAA 58.311 40.909 0.00 0.00 40.36 3.53
2968 3269 3.054875 AGAGCTATCACAACAGCAATCCA 60.055 43.478 0.00 0.00 40.36 3.41
2969 3270 3.311871 CAGAGCTATCACAACAGCAATCC 59.688 47.826 0.00 0.00 40.36 3.01
2970 3271 3.937706 ACAGAGCTATCACAACAGCAATC 59.062 43.478 0.00 0.00 40.36 2.67
2971 3272 3.947868 ACAGAGCTATCACAACAGCAAT 58.052 40.909 0.00 0.00 40.36 3.56
2972 3273 3.407424 ACAGAGCTATCACAACAGCAA 57.593 42.857 0.00 0.00 40.36 3.91
2973 3274 4.021104 AGTTACAGAGCTATCACAACAGCA 60.021 41.667 0.00 0.00 40.36 4.41
2974 3275 4.499183 AGTTACAGAGCTATCACAACAGC 58.501 43.478 0.00 0.00 38.09 4.40
2975 3276 5.746245 GCTAGTTACAGAGCTATCACAACAG 59.254 44.000 0.00 0.00 35.73 3.16
2976 3277 5.185056 TGCTAGTTACAGAGCTATCACAACA 59.815 40.000 9.96 0.00 39.54 3.33
2977 3278 5.651530 TGCTAGTTACAGAGCTATCACAAC 58.348 41.667 9.96 0.00 39.54 3.32
2978 3279 5.914898 TGCTAGTTACAGAGCTATCACAA 57.085 39.130 9.96 0.00 39.54 3.33
2979 3280 5.163509 CCTTGCTAGTTACAGAGCTATCACA 60.164 44.000 9.96 0.00 39.54 3.58
2980 3281 5.163499 ACCTTGCTAGTTACAGAGCTATCAC 60.163 44.000 9.96 0.00 39.54 3.06
2981 3282 4.956700 ACCTTGCTAGTTACAGAGCTATCA 59.043 41.667 9.96 0.00 39.54 2.15
2982 3283 5.523438 ACCTTGCTAGTTACAGAGCTATC 57.477 43.478 9.96 0.00 39.54 2.08
2983 3284 5.422331 TCAACCTTGCTAGTTACAGAGCTAT 59.578 40.000 9.96 0.00 39.54 2.97
2984 3285 4.770531 TCAACCTTGCTAGTTACAGAGCTA 59.229 41.667 9.96 2.93 39.54 3.32
2985 3286 3.578716 TCAACCTTGCTAGTTACAGAGCT 59.421 43.478 9.96 0.00 39.54 4.09
2986 3287 3.680458 GTCAACCTTGCTAGTTACAGAGC 59.320 47.826 2.83 2.83 39.25 4.09
2987 3288 4.686554 GTGTCAACCTTGCTAGTTACAGAG 59.313 45.833 0.00 0.00 0.00 3.35
2988 3289 4.344102 AGTGTCAACCTTGCTAGTTACAGA 59.656 41.667 0.00 0.00 0.00 3.41
2989 3290 4.449068 CAGTGTCAACCTTGCTAGTTACAG 59.551 45.833 0.00 0.00 0.00 2.74
2990 3291 4.100344 TCAGTGTCAACCTTGCTAGTTACA 59.900 41.667 0.00 0.00 0.00 2.41
2991 3292 4.628074 TCAGTGTCAACCTTGCTAGTTAC 58.372 43.478 0.00 0.00 0.00 2.50
2992 3293 4.948341 TCAGTGTCAACCTTGCTAGTTA 57.052 40.909 0.00 0.00 0.00 2.24
2993 3294 3.838244 TCAGTGTCAACCTTGCTAGTT 57.162 42.857 0.00 0.00 0.00 2.24
2994 3295 3.838244 TTCAGTGTCAACCTTGCTAGT 57.162 42.857 0.00 0.00 0.00 2.57
2995 3296 5.695851 AAATTCAGTGTCAACCTTGCTAG 57.304 39.130 0.00 0.00 0.00 3.42
2996 3297 5.827797 AGAAAATTCAGTGTCAACCTTGCTA 59.172 36.000 0.00 0.00 0.00 3.49
2997 3298 4.646492 AGAAAATTCAGTGTCAACCTTGCT 59.354 37.500 0.00 0.00 0.00 3.91
2998 3299 4.741676 CAGAAAATTCAGTGTCAACCTTGC 59.258 41.667 0.00 0.00 0.00 4.01
2999 3300 4.741676 GCAGAAAATTCAGTGTCAACCTTG 59.258 41.667 0.00 0.00 0.00 3.61
3000 3301 4.646492 AGCAGAAAATTCAGTGTCAACCTT 59.354 37.500 0.00 0.00 0.00 3.50
3001 3302 4.037208 CAGCAGAAAATTCAGTGTCAACCT 59.963 41.667 0.00 0.00 0.00 3.50
3002 3303 4.202050 ACAGCAGAAAATTCAGTGTCAACC 60.202 41.667 0.00 0.00 0.00 3.77
3003 3304 4.925068 ACAGCAGAAAATTCAGTGTCAAC 58.075 39.130 0.00 0.00 0.00 3.18
3004 3305 5.581126 AACAGCAGAAAATTCAGTGTCAA 57.419 34.783 0.00 0.00 0.00 3.18
3005 3306 6.017934 GTCTAACAGCAGAAAATTCAGTGTCA 60.018 38.462 0.00 0.00 0.00 3.58
3006 3307 6.017934 TGTCTAACAGCAGAAAATTCAGTGTC 60.018 38.462 0.00 0.00 0.00 3.67
3007 3308 5.822519 TGTCTAACAGCAGAAAATTCAGTGT 59.177 36.000 0.00 0.00 0.00 3.55
3008 3309 6.017605 AGTGTCTAACAGCAGAAAATTCAGTG 60.018 38.462 0.00 0.00 0.00 3.66
3009 3310 6.017605 CAGTGTCTAACAGCAGAAAATTCAGT 60.018 38.462 0.00 0.00 0.00 3.41
3010 3311 6.203530 TCAGTGTCTAACAGCAGAAAATTCAG 59.796 38.462 0.00 0.00 0.00 3.02
3011 3312 6.054941 TCAGTGTCTAACAGCAGAAAATTCA 58.945 36.000 0.00 0.00 0.00 2.57
3012 3313 6.545504 TCAGTGTCTAACAGCAGAAAATTC 57.454 37.500 0.00 0.00 0.00 2.17
3013 3314 6.942532 TTCAGTGTCTAACAGCAGAAAATT 57.057 33.333 0.00 0.00 0.00 1.82
3014 3315 7.516198 AATTCAGTGTCTAACAGCAGAAAAT 57.484 32.000 0.00 0.00 0.00 1.82
3015 3316 6.942532 AATTCAGTGTCTAACAGCAGAAAA 57.057 33.333 0.00 0.00 0.00 2.29
3016 3317 6.542005 TGAAATTCAGTGTCTAACAGCAGAAA 59.458 34.615 0.00 0.00 0.00 2.52
3017 3318 6.054941 TGAAATTCAGTGTCTAACAGCAGAA 58.945 36.000 0.00 0.00 0.00 3.02
3018 3319 5.610398 TGAAATTCAGTGTCTAACAGCAGA 58.390 37.500 0.00 0.00 0.00 4.26
3019 3320 5.929697 TGAAATTCAGTGTCTAACAGCAG 57.070 39.130 0.00 0.00 0.00 4.24
3020 3321 6.072508 GGATTGAAATTCAGTGTCTAACAGCA 60.073 38.462 0.00 0.00 0.00 4.41
3021 3322 6.317857 GGATTGAAATTCAGTGTCTAACAGC 58.682 40.000 0.00 0.00 0.00 4.40
3022 3323 6.127897 GGGGATTGAAATTCAGTGTCTAACAG 60.128 42.308 0.00 0.00 0.00 3.16
3023 3324 5.710099 GGGGATTGAAATTCAGTGTCTAACA 59.290 40.000 0.00 0.00 0.00 2.41
3024 3325 5.710099 TGGGGATTGAAATTCAGTGTCTAAC 59.290 40.000 0.00 0.00 0.00 2.34
3025 3326 5.710099 GTGGGGATTGAAATTCAGTGTCTAA 59.290 40.000 0.00 0.00 0.00 2.10
3026 3327 5.014123 AGTGGGGATTGAAATTCAGTGTCTA 59.986 40.000 0.00 0.00 0.00 2.59
3027 3328 4.082125 GTGGGGATTGAAATTCAGTGTCT 58.918 43.478 0.00 0.00 0.00 3.41
3028 3329 4.082125 AGTGGGGATTGAAATTCAGTGTC 58.918 43.478 0.00 0.00 0.00 3.67
3029 3330 4.118168 AGTGGGGATTGAAATTCAGTGT 57.882 40.909 0.00 0.00 0.00 3.55
3030 3331 4.281688 ACAAGTGGGGATTGAAATTCAGTG 59.718 41.667 0.00 0.00 0.00 3.66
3031 3332 4.281688 CACAAGTGGGGATTGAAATTCAGT 59.718 41.667 0.00 0.00 0.00 3.41
3032 3333 4.813027 CACAAGTGGGGATTGAAATTCAG 58.187 43.478 0.00 0.00 0.00 3.02
3033 3334 3.006752 GCACAAGTGGGGATTGAAATTCA 59.993 43.478 2.00 0.00 0.00 2.57
3034 3335 3.006752 TGCACAAGTGGGGATTGAAATTC 59.993 43.478 2.00 0.00 0.00 2.17
3035 3336 2.971330 TGCACAAGTGGGGATTGAAATT 59.029 40.909 2.00 0.00 0.00 1.82
3036 3337 2.564062 CTGCACAAGTGGGGATTGAAAT 59.436 45.455 2.00 0.00 0.00 2.17
3037 3338 1.962807 CTGCACAAGTGGGGATTGAAA 59.037 47.619 2.00 0.00 0.00 2.69
3038 3339 1.133513 ACTGCACAAGTGGGGATTGAA 60.134 47.619 2.00 0.00 37.88 2.69
3039 3340 0.478072 ACTGCACAAGTGGGGATTGA 59.522 50.000 2.00 0.00 37.88 2.57
3040 3341 1.331214 AACTGCACAAGTGGGGATTG 58.669 50.000 2.00 0.00 39.81 2.67
3041 3342 2.108250 ACTAACTGCACAAGTGGGGATT 59.892 45.455 2.00 0.00 39.81 3.01
3042 3343 1.705186 ACTAACTGCACAAGTGGGGAT 59.295 47.619 2.00 0.00 39.81 3.85
3043 3344 1.136828 ACTAACTGCACAAGTGGGGA 58.863 50.000 2.00 0.00 39.81 4.81
3044 3345 2.851263 TACTAACTGCACAAGTGGGG 57.149 50.000 2.00 0.00 39.81 4.96
3045 3346 5.705609 AAAATACTAACTGCACAAGTGGG 57.294 39.130 2.00 0.00 39.81 4.61
3046 3347 5.920273 CCAAAAATACTAACTGCACAAGTGG 59.080 40.000 2.00 0.00 39.81 4.00
3047 3348 5.920273 CCCAAAAATACTAACTGCACAAGTG 59.080 40.000 0.00 0.00 39.81 3.16
3048 3349 5.830991 TCCCAAAAATACTAACTGCACAAGT 59.169 36.000 0.00 0.00 42.60 3.16
3049 3350 6.149633 GTCCCAAAAATACTAACTGCACAAG 58.850 40.000 0.00 0.00 0.00 3.16
3050 3351 5.278071 CGTCCCAAAAATACTAACTGCACAA 60.278 40.000 0.00 0.00 0.00 3.33
3051 3352 4.214545 CGTCCCAAAAATACTAACTGCACA 59.785 41.667 0.00 0.00 0.00 4.57
3052 3353 4.379082 CCGTCCCAAAAATACTAACTGCAC 60.379 45.833 0.00 0.00 0.00 4.57
3053 3354 3.754323 CCGTCCCAAAAATACTAACTGCA 59.246 43.478 0.00 0.00 0.00 4.41
3054 3355 4.004982 TCCGTCCCAAAAATACTAACTGC 58.995 43.478 0.00 0.00 0.00 4.40
3055 3356 4.634443 CCTCCGTCCCAAAAATACTAACTG 59.366 45.833 0.00 0.00 0.00 3.16
3056 3357 4.324022 CCCTCCGTCCCAAAAATACTAACT 60.324 45.833 0.00 0.00 0.00 2.24
3057 3358 3.943381 CCCTCCGTCCCAAAAATACTAAC 59.057 47.826 0.00 0.00 0.00 2.34
3058 3359 3.845398 TCCCTCCGTCCCAAAAATACTAA 59.155 43.478 0.00 0.00 0.00 2.24
3059 3360 3.452878 TCCCTCCGTCCCAAAAATACTA 58.547 45.455 0.00 0.00 0.00 1.82
3060 3361 2.238898 CTCCCTCCGTCCCAAAAATACT 59.761 50.000 0.00 0.00 0.00 2.12
3061 3362 2.026542 ACTCCCTCCGTCCCAAAAATAC 60.027 50.000 0.00 0.00 0.00 1.89
3062 3363 2.271777 ACTCCCTCCGTCCCAAAAATA 58.728 47.619 0.00 0.00 0.00 1.40
3063 3364 1.073098 ACTCCCTCCGTCCCAAAAAT 58.927 50.000 0.00 0.00 0.00 1.82
3064 3365 1.348696 GTACTCCCTCCGTCCCAAAAA 59.651 52.381 0.00 0.00 0.00 1.94
3065 3366 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
3066 3367 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
3067 3368 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
3068 3369 1.229131 ATAGTACTCCCTCCGTCCCA 58.771 55.000 0.00 0.00 0.00 4.37
3069 3370 2.374839 ACTATAGTACTCCCTCCGTCCC 59.625 54.545 2.75 0.00 0.00 4.46
3070 3371 3.181446 ACACTATAGTACTCCCTCCGTCC 60.181 52.174 4.74 0.00 0.00 4.79
3071 3372 3.814283 CACACTATAGTACTCCCTCCGTC 59.186 52.174 4.74 0.00 0.00 4.79
3072 3373 3.818180 CACACTATAGTACTCCCTCCGT 58.182 50.000 4.74 0.00 0.00 4.69
3073 3374 2.553172 GCACACTATAGTACTCCCTCCG 59.447 54.545 4.74 0.00 0.00 4.63
3074 3375 2.892215 GGCACACTATAGTACTCCCTCC 59.108 54.545 4.74 0.00 0.00 4.30
3075 3376 3.834938 AGGCACACTATAGTACTCCCTC 58.165 50.000 4.74 0.00 0.00 4.30
3076 3377 3.975479 AGGCACACTATAGTACTCCCT 57.025 47.619 4.74 6.42 0.00 4.20
3077 3378 5.116882 CAAAAGGCACACTATAGTACTCCC 58.883 45.833 4.74 4.23 0.00 4.30
3078 3379 5.581085 CACAAAAGGCACACTATAGTACTCC 59.419 44.000 4.74 6.71 0.00 3.85
3079 3380 5.063564 GCACAAAAGGCACACTATAGTACTC 59.936 44.000 4.74 0.00 0.00 2.59
3080 3381 4.935808 GCACAAAAGGCACACTATAGTACT 59.064 41.667 4.74 0.00 0.00 2.73
3081 3382 4.935808 AGCACAAAAGGCACACTATAGTAC 59.064 41.667 4.74 0.00 0.00 2.73
3082 3383 5.160607 AGCACAAAAGGCACACTATAGTA 57.839 39.130 4.74 0.00 0.00 1.82
3083 3384 4.021102 AGCACAAAAGGCACACTATAGT 57.979 40.909 0.00 0.00 0.00 2.12
3084 3385 6.494893 TTAAGCACAAAAGGCACACTATAG 57.505 37.500 0.00 0.00 0.00 1.31
3085 3386 6.657117 TGATTAAGCACAAAAGGCACACTATA 59.343 34.615 0.00 0.00 0.00 1.31
3086 3387 5.476599 TGATTAAGCACAAAAGGCACACTAT 59.523 36.000 0.00 0.00 0.00 2.12
3087 3388 4.824537 TGATTAAGCACAAAAGGCACACTA 59.175 37.500 0.00 0.00 0.00 2.74
3088 3389 3.636300 TGATTAAGCACAAAAGGCACACT 59.364 39.130 0.00 0.00 0.00 3.55
3089 3390 3.735746 GTGATTAAGCACAAAAGGCACAC 59.264 43.478 18.61 0.00 38.63 3.82
3090 3391 3.243704 GGTGATTAAGCACAAAAGGCACA 60.244 43.478 24.04 0.00 40.52 4.57
3091 3392 3.243704 TGGTGATTAAGCACAAAAGGCAC 60.244 43.478 24.04 5.94 40.52 5.01
3092 3393 2.961741 TGGTGATTAAGCACAAAAGGCA 59.038 40.909 24.04 9.76 40.52 4.75
3093 3394 3.255642 TCTGGTGATTAAGCACAAAAGGC 59.744 43.478 24.04 7.31 40.52 4.35
3094 3395 5.452078 TTCTGGTGATTAAGCACAAAAGG 57.548 39.130 24.04 9.56 40.52 3.11
3095 3396 9.643693 ATTAATTCTGGTGATTAAGCACAAAAG 57.356 29.630 24.04 17.26 40.52 2.27
3098 3399 9.461312 ACTATTAATTCTGGTGATTAAGCACAA 57.539 29.630 24.04 13.38 40.52 3.33
3099 3400 9.109393 GACTATTAATTCTGGTGATTAAGCACA 57.891 33.333 24.04 10.31 40.52 4.57
3100 3401 9.331282 AGACTATTAATTCTGGTGATTAAGCAC 57.669 33.333 15.45 15.45 38.05 4.40
3101 3402 9.330063 CAGACTATTAATTCTGGTGATTAAGCA 57.670 33.333 8.67 0.00 36.39 3.91
3112 3413 4.058817 GCCGTCCCAGACTATTAATTCTG 58.941 47.826 9.37 9.37 39.25 3.02
3113 3414 3.243771 CGCCGTCCCAGACTATTAATTCT 60.244 47.826 0.00 0.00 0.00 2.40
3114 3415 3.057734 CGCCGTCCCAGACTATTAATTC 58.942 50.000 0.00 0.00 0.00 2.17
3115 3416 2.433239 ACGCCGTCCCAGACTATTAATT 59.567 45.455 0.00 0.00 0.00 1.40
3116 3417 2.037144 ACGCCGTCCCAGACTATTAAT 58.963 47.619 0.00 0.00 0.00 1.40
3117 3418 1.477553 ACGCCGTCCCAGACTATTAA 58.522 50.000 0.00 0.00 0.00 1.40
3118 3419 2.224606 CTACGCCGTCCCAGACTATTA 58.775 52.381 0.00 0.00 0.00 0.98
3119 3420 1.030457 CTACGCCGTCCCAGACTATT 58.970 55.000 0.00 0.00 0.00 1.73
3120 3421 1.453762 GCTACGCCGTCCCAGACTAT 61.454 60.000 0.00 0.00 0.00 2.12
3121 3422 2.117156 GCTACGCCGTCCCAGACTA 61.117 63.158 0.00 0.00 0.00 2.59
3122 3423 3.450115 GCTACGCCGTCCCAGACT 61.450 66.667 0.00 0.00 0.00 3.24
3123 3424 3.077519 ATGCTACGCCGTCCCAGAC 62.078 63.158 0.00 0.00 0.00 3.51
3124 3425 2.758327 ATGCTACGCCGTCCCAGA 60.758 61.111 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.