Multiple sequence alignment - TraesCS6B01G093000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G093000 chr6B 100.000 2393 0 0 1 2393 68900866 68903258 0.000000e+00 4420
1 TraesCS6B01G093000 chr7A 93.863 1499 90 2 1 1498 270771073 270772570 0.000000e+00 2257
2 TraesCS6B01G093000 chr5B 93.423 1490 95 3 11 1499 237158847 237157360 0.000000e+00 2206
3 TraesCS6B01G093000 chr3D 92.642 1495 97 9 5 1498 540372649 540374131 0.000000e+00 2139
4 TraesCS6B01G093000 chr3B 92.022 1479 115 3 22 1499 125892123 125893599 0.000000e+00 2074
5 TraesCS6B01G093000 chr7B 91.528 1499 124 3 1 1498 592906876 592908372 0.000000e+00 2061
6 TraesCS6B01G093000 chr7D 89.860 1499 144 7 5 1499 7795920 7797414 0.000000e+00 1919
7 TraesCS6B01G093000 chr4B 89.459 1461 148 6 12 1468 422027805 422029263 0.000000e+00 1840
8 TraesCS6B01G093000 chr5A 88.733 1500 167 2 1 1500 622529042 622527545 0.000000e+00 1832
9 TraesCS6B01G093000 chr2D 88.732 1491 164 4 11 1500 642787456 642785969 0.000000e+00 1820
10 TraesCS6B01G093000 chr6D 79.805 307 40 14 1809 2115 32659463 32659747 1.120000e-48 204


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G093000 chr6B 68900866 68903258 2392 False 4420 4420 100.000 1 2393 1 chr6B.!!$F1 2392
1 TraesCS6B01G093000 chr7A 270771073 270772570 1497 False 2257 2257 93.863 1 1498 1 chr7A.!!$F1 1497
2 TraesCS6B01G093000 chr5B 237157360 237158847 1487 True 2206 2206 93.423 11 1499 1 chr5B.!!$R1 1488
3 TraesCS6B01G093000 chr3D 540372649 540374131 1482 False 2139 2139 92.642 5 1498 1 chr3D.!!$F1 1493
4 TraesCS6B01G093000 chr3B 125892123 125893599 1476 False 2074 2074 92.022 22 1499 1 chr3B.!!$F1 1477
5 TraesCS6B01G093000 chr7B 592906876 592908372 1496 False 2061 2061 91.528 1 1498 1 chr7B.!!$F1 1497
6 TraesCS6B01G093000 chr7D 7795920 7797414 1494 False 1919 1919 89.860 5 1499 1 chr7D.!!$F1 1494
7 TraesCS6B01G093000 chr4B 422027805 422029263 1458 False 1840 1840 89.459 12 1468 1 chr4B.!!$F1 1456
8 TraesCS6B01G093000 chr5A 622527545 622529042 1497 True 1832 1832 88.733 1 1500 1 chr5A.!!$R1 1499
9 TraesCS6B01G093000 chr2D 642785969 642787456 1487 True 1820 1820 88.732 11 1500 1 chr2D.!!$R1 1489

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
873 877 0.973632 TCTCTGCCAAGAACGCCTAA 59.026 50.0 0.0 0.0 30.03 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1813 1820 0.03582 GTGTAATGAGTTGGGCCCGA 60.036 55.0 19.37 14.11 0.0 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
194 197 1.730902 CACGTGGTGCTCGACTGAG 60.731 63.158 7.95 0.00 45.49 3.35
279 282 5.028549 AGTCGATCATAGCCAAACTTGAT 57.971 39.130 0.00 0.00 32.36 2.57
588 592 6.094464 TCCTAATTGAGCACTCATTTGTGATG 59.906 38.462 14.84 3.26 39.64 3.07
596 600 4.093998 GCACTCATTTGTGATGACCTACAG 59.906 45.833 0.00 0.00 40.12 2.74
685 689 5.512404 CCACACCTTTACTCACACTCCATTA 60.512 44.000 0.00 0.00 0.00 1.90
873 877 0.973632 TCTCTGCCAAGAACGCCTAA 59.026 50.000 0.00 0.00 30.03 2.69
891 895 3.881688 CCTAATCCTCCATTGTTGCTGAG 59.118 47.826 0.00 0.00 0.00 3.35
1051 1055 0.396435 ATGCCCTCGTTGTCAAGACA 59.604 50.000 0.00 0.00 39.98 3.41
1117 1121 1.142870 CACAGGTTTGGTCCTCCTTGA 59.857 52.381 0.00 0.00 35.37 3.02
1126 1130 1.076727 TCCTCCTTGAGTCTGCCGA 59.923 57.895 0.00 0.00 0.00 5.54
1197 1201 1.307309 CCCCAACATCTGGCCATCA 59.693 57.895 5.51 0.00 44.90 3.07
1468 1475 6.002082 GTGGTAATATATTCAGGTGGGGAAC 58.998 44.000 0.00 0.00 0.00 3.62
1522 1529 4.744570 CTTTTTCGAAAAAGGGGGATAGC 58.255 43.478 38.29 0.00 46.87 2.97
1523 1530 3.443145 TTTCGAAAAAGGGGGATAGCA 57.557 42.857 8.44 0.00 0.00 3.49
1524 1531 2.413310 TCGAAAAAGGGGGATAGCAC 57.587 50.000 0.00 0.00 0.00 4.40
1525 1532 1.631388 TCGAAAAAGGGGGATAGCACA 59.369 47.619 0.00 0.00 0.00 4.57
1526 1533 1.743394 CGAAAAAGGGGGATAGCACAC 59.257 52.381 0.00 0.00 0.00 3.82
1527 1534 2.618045 CGAAAAAGGGGGATAGCACACT 60.618 50.000 0.00 0.00 0.00 3.55
1528 1535 3.431415 GAAAAAGGGGGATAGCACACTT 58.569 45.455 0.00 0.00 0.00 3.16
1529 1536 2.514458 AAAGGGGGATAGCACACTTG 57.486 50.000 0.00 0.00 0.00 3.16
1530 1537 0.625849 AAGGGGGATAGCACACTTGG 59.374 55.000 0.00 0.00 0.00 3.61
1531 1538 1.453928 GGGGGATAGCACACTTGGC 60.454 63.158 0.00 0.00 0.00 4.52
1532 1539 1.609783 GGGGATAGCACACTTGGCT 59.390 57.895 0.00 0.00 45.18 4.75
1533 1540 0.034089 GGGGATAGCACACTTGGCTT 60.034 55.000 0.00 0.00 42.62 4.35
1534 1541 1.383523 GGGATAGCACACTTGGCTTC 58.616 55.000 0.00 0.00 42.62 3.86
1535 1542 1.340017 GGGATAGCACACTTGGCTTCA 60.340 52.381 0.00 0.00 42.62 3.02
1536 1543 2.012673 GGATAGCACACTTGGCTTCAG 58.987 52.381 0.00 0.00 42.62 3.02
1537 1544 1.399791 GATAGCACACTTGGCTTCAGC 59.600 52.381 0.00 0.00 42.62 4.26
1538 1545 0.108396 TAGCACACTTGGCTTCAGCA 59.892 50.000 0.30 0.00 44.36 4.41
1539 1546 0.538977 AGCACACTTGGCTTCAGCAT 60.539 50.000 0.30 0.00 44.36 3.79
1540 1547 0.388134 GCACACTTGGCTTCAGCATG 60.388 55.000 0.30 0.00 44.36 4.06
1541 1548 0.388134 CACACTTGGCTTCAGCATGC 60.388 55.000 10.51 10.51 44.36 4.06
1542 1549 0.824595 ACACTTGGCTTCAGCATGCA 60.825 50.000 21.98 0.00 44.36 3.96
1543 1550 0.530744 CACTTGGCTTCAGCATGCAT 59.469 50.000 21.98 1.69 44.36 3.96
1544 1551 1.746787 CACTTGGCTTCAGCATGCATA 59.253 47.619 21.98 3.86 44.36 3.14
1545 1552 2.164827 CACTTGGCTTCAGCATGCATAA 59.835 45.455 21.98 12.31 44.36 1.90
1546 1553 2.827322 ACTTGGCTTCAGCATGCATAAA 59.173 40.909 21.98 9.70 44.36 1.40
1547 1554 3.449737 ACTTGGCTTCAGCATGCATAAAT 59.550 39.130 21.98 0.00 44.36 1.40
1548 1555 4.081309 ACTTGGCTTCAGCATGCATAAATT 60.081 37.500 21.98 0.00 44.36 1.82
1549 1556 3.787785 TGGCTTCAGCATGCATAAATTG 58.212 40.909 21.98 8.32 44.36 2.32
1550 1557 3.447944 TGGCTTCAGCATGCATAAATTGA 59.552 39.130 21.98 10.81 44.36 2.57
1551 1558 4.049186 GGCTTCAGCATGCATAAATTGAG 58.951 43.478 21.98 8.55 44.36 3.02
1552 1559 4.202080 GGCTTCAGCATGCATAAATTGAGA 60.202 41.667 21.98 4.21 44.36 3.27
1553 1560 5.509163 GGCTTCAGCATGCATAAATTGAGAT 60.509 40.000 21.98 0.00 44.36 2.75
1554 1561 5.402568 GCTTCAGCATGCATAAATTGAGATG 59.597 40.000 21.98 4.58 41.59 2.90
1555 1562 7.976351 GCTTCAGCATGCATAAATTGAGATGC 61.976 42.308 21.98 13.86 43.59 3.91
1562 1569 4.746729 GCATAAATTGAGATGCACAACCA 58.253 39.130 12.86 0.00 46.29 3.67
1563 1570 5.170021 GCATAAATTGAGATGCACAACCAA 58.830 37.500 12.86 0.00 46.29 3.67
1564 1571 5.813672 GCATAAATTGAGATGCACAACCAAT 59.186 36.000 12.86 0.00 46.29 3.16
1565 1572 6.979817 GCATAAATTGAGATGCACAACCAATA 59.020 34.615 12.86 0.00 46.29 1.90
1566 1573 7.654520 GCATAAATTGAGATGCACAACCAATAT 59.345 33.333 12.86 0.00 46.29 1.28
1570 1577 8.467963 AATTGAGATGCACAACCAATATATGA 57.532 30.769 0.00 0.00 0.00 2.15
1571 1578 8.645814 ATTGAGATGCACAACCAATATATGAT 57.354 30.769 0.00 0.00 0.00 2.45
1572 1579 8.467963 TTGAGATGCACAACCAATATATGATT 57.532 30.769 0.00 0.00 0.00 2.57
1573 1580 7.878036 TGAGATGCACAACCAATATATGATTG 58.122 34.615 0.00 0.00 0.00 2.67
1574 1581 7.720515 TGAGATGCACAACCAATATATGATTGA 59.279 33.333 9.64 0.00 0.00 2.57
1575 1582 8.645814 AGATGCACAACCAATATATGATTGAT 57.354 30.769 9.64 0.00 0.00 2.57
1576 1583 9.085645 AGATGCACAACCAATATATGATTGATT 57.914 29.630 9.64 0.00 0.00 2.57
1584 1591 9.827198 AACCAATATATGATTGATTATGTGGGT 57.173 29.630 4.23 0.00 27.66 4.51
1585 1592 9.827198 ACCAATATATGATTGATTATGTGGGTT 57.173 29.630 4.23 0.00 0.00 4.11
1589 1596 9.690913 ATATATGATTGATTATGTGGGTTCCAG 57.309 33.333 0.00 0.00 32.34 3.86
1590 1597 5.191727 TGATTGATTATGTGGGTTCCAGT 57.808 39.130 0.00 0.00 32.34 4.00
1591 1598 5.579047 TGATTGATTATGTGGGTTCCAGTT 58.421 37.500 0.00 0.00 32.34 3.16
1592 1599 6.015918 TGATTGATTATGTGGGTTCCAGTTT 58.984 36.000 0.00 0.00 32.34 2.66
1593 1600 6.496565 TGATTGATTATGTGGGTTCCAGTTTT 59.503 34.615 0.00 0.00 32.34 2.43
1594 1601 6.739331 TTGATTATGTGGGTTCCAGTTTTT 57.261 33.333 0.00 0.00 32.34 1.94
1595 1602 7.841282 TTGATTATGTGGGTTCCAGTTTTTA 57.159 32.000 0.00 0.00 32.34 1.52
1596 1603 7.222000 TGATTATGTGGGTTCCAGTTTTTAC 57.778 36.000 0.00 0.00 32.34 2.01
1597 1604 6.209788 TGATTATGTGGGTTCCAGTTTTTACC 59.790 38.462 0.00 0.00 32.34 2.85
1598 1605 3.673543 TGTGGGTTCCAGTTTTTACCT 57.326 42.857 0.00 0.00 32.34 3.08
1599 1606 3.558033 TGTGGGTTCCAGTTTTTACCTC 58.442 45.455 0.00 0.00 32.34 3.85
1600 1607 2.889045 GTGGGTTCCAGTTTTTACCTCC 59.111 50.000 0.00 0.00 32.34 4.30
1601 1608 2.158430 TGGGTTCCAGTTTTTACCTCCC 60.158 50.000 0.00 0.00 0.00 4.30
1602 1609 2.156917 GGTTCCAGTTTTTACCTCCCG 58.843 52.381 0.00 0.00 0.00 5.14
1603 1610 2.224597 GGTTCCAGTTTTTACCTCCCGA 60.225 50.000 0.00 0.00 0.00 5.14
1604 1611 3.560668 GGTTCCAGTTTTTACCTCCCGAT 60.561 47.826 0.00 0.00 0.00 4.18
1605 1612 4.077108 GTTCCAGTTTTTACCTCCCGATT 58.923 43.478 0.00 0.00 0.00 3.34
1606 1613 4.376225 TCCAGTTTTTACCTCCCGATTT 57.624 40.909 0.00 0.00 0.00 2.17
1607 1614 5.502089 TCCAGTTTTTACCTCCCGATTTA 57.498 39.130 0.00 0.00 0.00 1.40
1608 1615 5.247862 TCCAGTTTTTACCTCCCGATTTAC 58.752 41.667 0.00 0.00 0.00 2.01
1609 1616 5.005094 CCAGTTTTTACCTCCCGATTTACA 58.995 41.667 0.00 0.00 0.00 2.41
1610 1617 5.474189 CCAGTTTTTACCTCCCGATTTACAA 59.526 40.000 0.00 0.00 0.00 2.41
1611 1618 6.152154 CCAGTTTTTACCTCCCGATTTACAAT 59.848 38.462 0.00 0.00 0.00 2.71
1612 1619 7.248437 CAGTTTTTACCTCCCGATTTACAATC 58.752 38.462 0.00 0.00 0.00 2.67
1613 1620 7.120726 CAGTTTTTACCTCCCGATTTACAATCT 59.879 37.037 0.00 0.00 0.00 2.40
1614 1621 7.668469 AGTTTTTACCTCCCGATTTACAATCTT 59.332 33.333 0.00 0.00 0.00 2.40
1615 1622 8.301720 GTTTTTACCTCCCGATTTACAATCTTT 58.698 33.333 0.00 0.00 0.00 2.52
1616 1623 6.995511 TTACCTCCCGATTTACAATCTTTG 57.004 37.500 0.00 0.00 0.00 2.77
1618 1625 6.057321 ACCTCCCGATTTACAATCTTTGTA 57.943 37.500 0.00 0.00 43.27 2.41
1619 1626 5.878669 ACCTCCCGATTTACAATCTTTGTAC 59.121 40.000 0.00 0.00 45.16 2.90
1620 1627 5.878116 CCTCCCGATTTACAATCTTTGTACA 59.122 40.000 0.00 0.00 45.16 2.90
1621 1628 6.183360 CCTCCCGATTTACAATCTTTGTACAC 60.183 42.308 0.00 0.00 45.16 2.90
1622 1629 6.469410 TCCCGATTTACAATCTTTGTACACT 58.531 36.000 0.00 0.00 45.16 3.55
1623 1630 6.370442 TCCCGATTTACAATCTTTGTACACTG 59.630 38.462 0.00 0.00 45.16 3.66
1624 1631 6.370442 CCCGATTTACAATCTTTGTACACTGA 59.630 38.462 0.00 0.00 45.16 3.41
1625 1632 7.065803 CCCGATTTACAATCTTTGTACACTGAT 59.934 37.037 0.00 0.00 45.16 2.90
1626 1633 8.450964 CCGATTTACAATCTTTGTACACTGATT 58.549 33.333 13.65 13.65 45.16 2.57
1631 1638 7.907214 ACAATCTTTGTACACTGATTACTCC 57.093 36.000 17.12 0.00 43.27 3.85
1632 1639 6.590292 ACAATCTTTGTACACTGATTACTCCG 59.410 38.462 17.12 10.32 43.27 4.63
1633 1640 5.717078 TCTTTGTACACTGATTACTCCGT 57.283 39.130 0.00 0.00 0.00 4.69
1634 1641 6.092955 TCTTTGTACACTGATTACTCCGTT 57.907 37.500 0.00 0.00 0.00 4.44
1635 1642 6.518493 TCTTTGTACACTGATTACTCCGTTT 58.482 36.000 0.00 0.00 0.00 3.60
1636 1643 7.660112 TCTTTGTACACTGATTACTCCGTTTA 58.340 34.615 0.00 0.00 0.00 2.01
1637 1644 7.811236 TCTTTGTACACTGATTACTCCGTTTAG 59.189 37.037 0.00 0.00 0.00 1.85
1638 1645 5.404946 TGTACACTGATTACTCCGTTTAGC 58.595 41.667 0.00 0.00 0.00 3.09
1639 1646 4.530710 ACACTGATTACTCCGTTTAGCA 57.469 40.909 0.00 0.00 0.00 3.49
1640 1647 4.495422 ACACTGATTACTCCGTTTAGCAG 58.505 43.478 0.00 0.00 0.00 4.24
1641 1648 4.021368 ACACTGATTACTCCGTTTAGCAGT 60.021 41.667 0.00 0.00 35.92 4.40
1642 1649 5.184479 ACACTGATTACTCCGTTTAGCAGTA 59.816 40.000 0.00 0.00 33.99 2.74
1643 1650 6.127423 ACACTGATTACTCCGTTTAGCAGTAT 60.127 38.462 0.00 0.00 33.99 2.12
1644 1651 6.757010 CACTGATTACTCCGTTTAGCAGTATT 59.243 38.462 0.00 0.00 33.99 1.89
1645 1652 7.277981 CACTGATTACTCCGTTTAGCAGTATTT 59.722 37.037 0.00 0.00 33.99 1.40
1646 1653 7.491696 ACTGATTACTCCGTTTAGCAGTATTTC 59.508 37.037 0.00 0.00 33.99 2.17
1647 1654 7.324935 TGATTACTCCGTTTAGCAGTATTTCA 58.675 34.615 0.00 0.00 0.00 2.69
1648 1655 7.985184 TGATTACTCCGTTTAGCAGTATTTCAT 59.015 33.333 0.00 0.00 0.00 2.57
1649 1656 8.732746 ATTACTCCGTTTAGCAGTATTTCATT 57.267 30.769 0.00 0.00 0.00 2.57
1650 1657 6.663944 ACTCCGTTTAGCAGTATTTCATTC 57.336 37.500 0.00 0.00 0.00 2.67
1651 1658 5.291128 ACTCCGTTTAGCAGTATTTCATTCG 59.709 40.000 0.00 0.00 0.00 3.34
1652 1659 5.172934 TCCGTTTAGCAGTATTTCATTCGT 58.827 37.500 0.00 0.00 0.00 3.85
1653 1660 5.640357 TCCGTTTAGCAGTATTTCATTCGTT 59.360 36.000 0.00 0.00 0.00 3.85
1654 1661 6.148150 TCCGTTTAGCAGTATTTCATTCGTTT 59.852 34.615 0.00 0.00 0.00 3.60
1655 1662 6.799925 CCGTTTAGCAGTATTTCATTCGTTTT 59.200 34.615 0.00 0.00 0.00 2.43
1656 1663 7.958567 CCGTTTAGCAGTATTTCATTCGTTTTA 59.041 33.333 0.00 0.00 0.00 1.52
1657 1664 9.485591 CGTTTAGCAGTATTTCATTCGTTTTAT 57.514 29.630 0.00 0.00 0.00 1.40
1659 1666 9.697250 TTTAGCAGTATTTCATTCGTTTTATCG 57.303 29.630 0.00 0.00 0.00 2.92
1660 1667 6.192360 AGCAGTATTTCATTCGTTTTATCGC 58.808 36.000 0.00 0.00 0.00 4.58
1661 1668 5.963004 GCAGTATTTCATTCGTTTTATCGCA 59.037 36.000 0.00 0.00 0.00 5.10
1662 1669 6.632834 GCAGTATTTCATTCGTTTTATCGCAT 59.367 34.615 0.00 0.00 0.00 4.73
1663 1670 7.165812 GCAGTATTTCATTCGTTTTATCGCATT 59.834 33.333 0.00 0.00 0.00 3.56
1664 1671 9.009327 CAGTATTTCATTCGTTTTATCGCATTT 57.991 29.630 0.00 0.00 0.00 2.32
1675 1682 9.828852 TCGTTTTATCGCATTTACTAAAAATGT 57.171 25.926 11.03 0.00 39.25 2.71
1679 1686 6.885735 ATCGCATTTACTAAAAATGTTGCC 57.114 33.333 11.03 0.00 39.25 4.52
1680 1687 5.773575 TCGCATTTACTAAAAATGTTGCCA 58.226 33.333 11.03 0.00 39.25 4.92
1681 1688 5.861251 TCGCATTTACTAAAAATGTTGCCAG 59.139 36.000 11.03 0.00 39.25 4.85
1682 1689 5.861251 CGCATTTACTAAAAATGTTGCCAGA 59.139 36.000 11.03 0.00 39.25 3.86
1683 1690 6.531240 CGCATTTACTAAAAATGTTGCCAGAT 59.469 34.615 11.03 0.00 39.25 2.90
1684 1691 7.063308 CGCATTTACTAAAAATGTTGCCAGATT 59.937 33.333 11.03 0.00 39.25 2.40
1685 1692 8.720562 GCATTTACTAAAAATGTTGCCAGATTT 58.279 29.630 11.03 0.00 39.25 2.17
1690 1697 8.587952 ACTAAAAATGTTGCCAGATTTTACAC 57.412 30.769 6.13 0.00 35.37 2.90
1691 1698 6.859420 AAAAATGTTGCCAGATTTTACACC 57.141 33.333 6.13 0.00 35.37 4.16
1692 1699 5.543507 AAATGTTGCCAGATTTTACACCA 57.456 34.783 0.00 0.00 0.00 4.17
1693 1700 5.743636 AATGTTGCCAGATTTTACACCAT 57.256 34.783 0.00 0.00 0.00 3.55
1694 1701 5.743636 ATGTTGCCAGATTTTACACCATT 57.256 34.783 0.00 0.00 0.00 3.16
1695 1702 5.543507 TGTTGCCAGATTTTACACCATTT 57.456 34.783 0.00 0.00 0.00 2.32
1696 1703 6.656632 TGTTGCCAGATTTTACACCATTTA 57.343 33.333 0.00 0.00 0.00 1.40
1697 1704 7.055667 TGTTGCCAGATTTTACACCATTTAA 57.944 32.000 0.00 0.00 0.00 1.52
1698 1705 7.500992 TGTTGCCAGATTTTACACCATTTAAA 58.499 30.769 0.00 0.00 0.00 1.52
1699 1706 7.655328 TGTTGCCAGATTTTACACCATTTAAAG 59.345 33.333 0.00 0.00 0.00 1.85
1700 1707 7.296628 TGCCAGATTTTACACCATTTAAAGT 57.703 32.000 0.00 0.00 0.00 2.66
1701 1708 7.731054 TGCCAGATTTTACACCATTTAAAGTT 58.269 30.769 0.00 0.00 0.00 2.66
1702 1709 8.207545 TGCCAGATTTTACACCATTTAAAGTTT 58.792 29.630 0.00 0.00 0.00 2.66
1703 1710 9.051679 GCCAGATTTTACACCATTTAAAGTTTT 57.948 29.630 0.00 0.00 0.00 2.43
1709 1716 9.930693 TTTTACACCATTTAAAGTTTTGTGAGT 57.069 25.926 0.00 0.00 0.00 3.41
1710 1717 8.918961 TTACACCATTTAAAGTTTTGTGAGTG 57.081 30.769 0.00 0.22 0.00 3.51
1711 1718 6.337356 ACACCATTTAAAGTTTTGTGAGTGG 58.663 36.000 0.00 4.65 0.00 4.00
1712 1719 6.071051 ACACCATTTAAAGTTTTGTGAGTGGT 60.071 34.615 0.00 5.15 36.73 4.16
1713 1720 6.475402 CACCATTTAAAGTTTTGTGAGTGGTC 59.525 38.462 0.00 0.00 34.26 4.02
1714 1721 6.379988 ACCATTTAAAGTTTTGTGAGTGGTCT 59.620 34.615 0.00 0.00 30.99 3.85
1715 1722 6.697019 CCATTTAAAGTTTTGTGAGTGGTCTG 59.303 38.462 0.00 0.00 0.00 3.51
1716 1723 7.416213 CCATTTAAAGTTTTGTGAGTGGTCTGA 60.416 37.037 0.00 0.00 0.00 3.27
1717 1724 4.965119 AAAGTTTTGTGAGTGGTCTGAC 57.035 40.909 0.00 0.00 0.00 3.51
1718 1725 2.919228 AGTTTTGTGAGTGGTCTGACC 58.081 47.619 19.96 19.96 39.22 4.02
1719 1726 1.597663 GTTTTGTGAGTGGTCTGACCG 59.402 52.381 21.15 0.00 42.58 4.79
1720 1727 0.105964 TTTGTGAGTGGTCTGACCGG 59.894 55.000 21.15 0.00 42.58 5.28
1721 1728 1.046472 TTGTGAGTGGTCTGACCGGT 61.046 55.000 21.15 6.92 42.58 5.28
1722 1729 1.006102 GTGAGTGGTCTGACCGGTG 60.006 63.158 14.63 0.00 42.58 4.94
1723 1730 2.207229 TGAGTGGTCTGACCGGTGG 61.207 63.158 14.63 4.50 42.58 4.61
1724 1731 3.591254 GAGTGGTCTGACCGGTGGC 62.591 68.421 14.63 0.00 42.58 5.01
1725 1732 3.626924 GTGGTCTGACCGGTGGCT 61.627 66.667 14.63 0.00 42.58 4.75
1726 1733 2.847234 TGGTCTGACCGGTGGCTT 60.847 61.111 14.63 0.00 42.58 4.35
1727 1734 2.358737 GGTCTGACCGGTGGCTTG 60.359 66.667 14.63 0.00 0.00 4.01
1728 1735 2.426023 GTCTGACCGGTGGCTTGT 59.574 61.111 14.63 0.00 0.00 3.16
1729 1736 1.668151 GTCTGACCGGTGGCTTGTC 60.668 63.158 14.63 0.00 0.00 3.18
1730 1737 2.137528 TCTGACCGGTGGCTTGTCA 61.138 57.895 14.63 0.00 37.45 3.58
1731 1738 1.227823 CTGACCGGTGGCTTGTCAA 60.228 57.895 14.63 0.00 38.45 3.18
1732 1739 1.507141 CTGACCGGTGGCTTGTCAAC 61.507 60.000 14.63 0.00 38.45 3.18
1733 1740 2.203294 ACCGGTGGCTTGTCAACC 60.203 61.111 6.12 0.00 0.00 3.77
1734 1741 2.203280 CCGGTGGCTTGTCAACCA 60.203 61.111 0.00 3.58 0.00 3.67
1735 1742 1.826054 CCGGTGGCTTGTCAACCAA 60.826 57.895 8.03 0.00 37.79 3.67
1736 1743 1.358759 CGGTGGCTTGTCAACCAAC 59.641 57.895 10.52 10.52 40.46 3.77
1737 1744 1.358759 GGTGGCTTGTCAACCAACG 59.641 57.895 8.03 0.00 37.79 4.10
1738 1745 1.358759 GTGGCTTGTCAACCAACGG 59.641 57.895 8.03 0.00 37.79 4.44
1739 1746 2.335011 GGCTTGTCAACCAACGGC 59.665 61.111 0.00 0.00 0.00 5.68
1740 1747 2.335011 GCTTGTCAACCAACGGCC 59.665 61.111 0.00 0.00 0.00 6.13
1741 1748 2.485795 GCTTGTCAACCAACGGCCA 61.486 57.895 2.24 0.00 0.00 5.36
1742 1749 1.654220 CTTGTCAACCAACGGCCAG 59.346 57.895 2.24 0.00 0.00 4.85
1743 1750 0.817634 CTTGTCAACCAACGGCCAGA 60.818 55.000 2.24 0.00 0.00 3.86
1744 1751 1.098712 TTGTCAACCAACGGCCAGAC 61.099 55.000 2.24 0.00 0.00 3.51
1745 1752 1.525077 GTCAACCAACGGCCAGACA 60.525 57.895 2.24 0.00 0.00 3.41
1746 1753 1.227823 TCAACCAACGGCCAGACAG 60.228 57.895 2.24 0.00 0.00 3.51
1747 1754 2.594592 AACCAACGGCCAGACAGC 60.595 61.111 2.24 0.00 0.00 4.40
1748 1755 3.120086 AACCAACGGCCAGACAGCT 62.120 57.895 2.24 0.00 0.00 4.24
1749 1756 2.743928 CCAACGGCCAGACAGCTC 60.744 66.667 2.24 0.00 0.00 4.09
1750 1757 2.345244 CAACGGCCAGACAGCTCT 59.655 61.111 2.24 0.00 0.00 4.09
1751 1758 1.591703 CAACGGCCAGACAGCTCTA 59.408 57.895 2.24 0.00 0.00 2.43
1752 1759 0.037326 CAACGGCCAGACAGCTCTAA 60.037 55.000 2.24 0.00 0.00 2.10
1753 1760 0.685097 AACGGCCAGACAGCTCTAAA 59.315 50.000 2.24 0.00 0.00 1.85
1754 1761 0.685097 ACGGCCAGACAGCTCTAAAA 59.315 50.000 2.24 0.00 0.00 1.52
1755 1762 1.071699 ACGGCCAGACAGCTCTAAAAA 59.928 47.619 2.24 0.00 0.00 1.94
1756 1763 2.290323 ACGGCCAGACAGCTCTAAAAAT 60.290 45.455 2.24 0.00 0.00 1.82
1757 1764 2.749621 CGGCCAGACAGCTCTAAAAATT 59.250 45.455 2.24 0.00 0.00 1.82
1758 1765 3.191371 CGGCCAGACAGCTCTAAAAATTT 59.809 43.478 2.24 0.00 0.00 1.82
1759 1766 4.321230 CGGCCAGACAGCTCTAAAAATTTT 60.321 41.667 2.24 0.00 0.00 1.82
1760 1767 5.106317 CGGCCAGACAGCTCTAAAAATTTTA 60.106 40.000 2.24 0.00 0.00 1.52
1761 1768 6.325596 GGCCAGACAGCTCTAAAAATTTTAG 58.674 40.000 16.99 16.99 0.00 1.85
1762 1769 6.325596 GCCAGACAGCTCTAAAAATTTTAGG 58.674 40.000 21.21 14.42 0.00 2.69
1763 1770 6.151144 GCCAGACAGCTCTAAAAATTTTAGGA 59.849 38.462 21.21 10.17 0.00 2.94
1764 1771 7.309194 GCCAGACAGCTCTAAAAATTTTAGGAA 60.309 37.037 21.21 6.27 0.00 3.36
1765 1772 8.576442 CCAGACAGCTCTAAAAATTTTAGGAAA 58.424 33.333 21.21 5.66 0.00 3.13
1766 1773 9.965824 CAGACAGCTCTAAAAATTTTAGGAAAA 57.034 29.630 21.21 5.36 34.41 2.29
1767 1774 9.967346 AGACAGCTCTAAAAATTTTAGGAAAAC 57.033 29.630 21.21 11.24 32.37 2.43
1768 1775 9.193133 GACAGCTCTAAAAATTTTAGGAAAACC 57.807 33.333 21.21 7.49 32.37 3.27
1769 1776 8.700973 ACAGCTCTAAAAATTTTAGGAAAACCA 58.299 29.630 21.21 3.85 32.37 3.67
1770 1777 9.541143 CAGCTCTAAAAATTTTAGGAAAACCAA 57.459 29.630 21.21 3.25 32.37 3.67
1771 1778 9.542462 AGCTCTAAAAATTTTAGGAAAACCAAC 57.458 29.630 21.21 1.05 32.37 3.77
1772 1779 9.320352 GCTCTAAAAATTTTAGGAAAACCAACA 57.680 29.630 21.21 2.06 32.37 3.33
1774 1781 9.320352 TCTAAAAATTTTAGGAAAACCAACAGC 57.680 29.630 21.21 0.00 32.37 4.40
1775 1782 6.935741 AAAATTTTAGGAAAACCAACAGCC 57.064 33.333 0.37 0.00 32.37 4.85
1776 1783 4.617253 ATTTTAGGAAAACCAACAGCCC 57.383 40.909 0.00 0.00 32.37 5.19
1777 1784 3.322191 TTTAGGAAAACCAACAGCCCT 57.678 42.857 0.00 0.00 0.00 5.19
1778 1785 3.322191 TTAGGAAAACCAACAGCCCTT 57.678 42.857 0.00 0.00 0.00 3.95
1779 1786 2.174685 AGGAAAACCAACAGCCCTTT 57.825 45.000 0.00 0.00 0.00 3.11
1780 1787 2.477245 AGGAAAACCAACAGCCCTTTT 58.523 42.857 0.00 0.00 0.00 2.27
1781 1788 2.843730 AGGAAAACCAACAGCCCTTTTT 59.156 40.909 0.00 0.00 0.00 1.94
1782 1789 2.942376 GGAAAACCAACAGCCCTTTTTG 59.058 45.455 0.00 0.00 0.00 2.44
1783 1790 3.369997 GGAAAACCAACAGCCCTTTTTGA 60.370 43.478 0.00 0.00 0.00 2.69
1784 1791 2.979814 AACCAACAGCCCTTTTTGAC 57.020 45.000 0.00 0.00 0.00 3.18
1785 1792 2.159179 ACCAACAGCCCTTTTTGACT 57.841 45.000 0.00 0.00 0.00 3.41
1786 1793 2.466846 ACCAACAGCCCTTTTTGACTT 58.533 42.857 0.00 0.00 0.00 3.01
1787 1794 2.837591 ACCAACAGCCCTTTTTGACTTT 59.162 40.909 0.00 0.00 0.00 2.66
1788 1795 3.263170 ACCAACAGCCCTTTTTGACTTTT 59.737 39.130 0.00 0.00 0.00 2.27
1789 1796 4.260985 CCAACAGCCCTTTTTGACTTTTT 58.739 39.130 0.00 0.00 0.00 1.94
1814 1821 8.926715 TTTTAGAAGAACAGCCTTTCTTTTTC 57.073 30.769 10.63 0.79 44.27 2.29
1815 1822 5.175090 AGAAGAACAGCCTTTCTTTTTCG 57.825 39.130 10.63 0.00 44.27 3.46
1816 1823 3.990318 AGAACAGCCTTTCTTTTTCGG 57.010 42.857 0.00 0.00 31.39 4.30
1817 1824 2.623416 AGAACAGCCTTTCTTTTTCGGG 59.377 45.455 0.00 0.00 31.39 5.14
1818 1825 0.673985 ACAGCCTTTCTTTTTCGGGC 59.326 50.000 0.00 0.00 42.74 6.13
1819 1826 0.038251 CAGCCTTTCTTTTTCGGGCC 60.038 55.000 0.00 0.00 43.36 5.80
1820 1827 1.185618 AGCCTTTCTTTTTCGGGCCC 61.186 55.000 13.57 13.57 43.36 5.80
1821 1828 1.468506 GCCTTTCTTTTTCGGGCCCA 61.469 55.000 24.92 6.15 37.12 5.36
1822 1829 1.044611 CCTTTCTTTTTCGGGCCCAA 58.955 50.000 24.92 12.74 0.00 4.12
1823 1830 1.270094 CCTTTCTTTTTCGGGCCCAAC 60.270 52.381 24.92 0.00 0.00 3.77
1824 1831 1.686587 CTTTCTTTTTCGGGCCCAACT 59.313 47.619 24.92 0.00 0.00 3.16
1825 1832 1.324383 TTCTTTTTCGGGCCCAACTC 58.676 50.000 24.92 0.00 0.00 3.01
1826 1833 0.183971 TCTTTTTCGGGCCCAACTCA 59.816 50.000 24.92 0.44 0.00 3.41
1827 1834 1.203001 TCTTTTTCGGGCCCAACTCAT 60.203 47.619 24.92 0.00 0.00 2.90
1828 1835 1.618343 CTTTTTCGGGCCCAACTCATT 59.382 47.619 24.92 0.00 0.00 2.57
1829 1836 2.588464 TTTTCGGGCCCAACTCATTA 57.412 45.000 24.92 0.00 0.00 1.90
1830 1837 1.828979 TTTCGGGCCCAACTCATTAC 58.171 50.000 24.92 0.00 0.00 1.89
1831 1838 0.693622 TTCGGGCCCAACTCATTACA 59.306 50.000 24.92 0.00 0.00 2.41
1832 1839 0.035820 TCGGGCCCAACTCATTACAC 60.036 55.000 24.92 0.00 0.00 2.90
1833 1840 0.322098 CGGGCCCAACTCATTACACA 60.322 55.000 24.92 0.00 0.00 3.72
1834 1841 1.463674 GGGCCCAACTCATTACACAG 58.536 55.000 19.95 0.00 0.00 3.66
1835 1842 0.811281 GGCCCAACTCATTACACAGC 59.189 55.000 0.00 0.00 0.00 4.40
1836 1843 1.533625 GCCCAACTCATTACACAGCA 58.466 50.000 0.00 0.00 0.00 4.41
1837 1844 1.885887 GCCCAACTCATTACACAGCAA 59.114 47.619 0.00 0.00 0.00 3.91
1838 1845 2.295909 GCCCAACTCATTACACAGCAAA 59.704 45.455 0.00 0.00 0.00 3.68
1839 1846 3.857010 GCCCAACTCATTACACAGCAAAC 60.857 47.826 0.00 0.00 0.00 2.93
1840 1847 3.569701 CCCAACTCATTACACAGCAAACT 59.430 43.478 0.00 0.00 0.00 2.66
1841 1848 4.037923 CCCAACTCATTACACAGCAAACTT 59.962 41.667 0.00 0.00 0.00 2.66
1842 1849 5.215160 CCAACTCATTACACAGCAAACTTC 58.785 41.667 0.00 0.00 0.00 3.01
1843 1850 4.732285 ACTCATTACACAGCAAACTTCG 57.268 40.909 0.00 0.00 0.00 3.79
1844 1851 4.127171 ACTCATTACACAGCAAACTTCGT 58.873 39.130 0.00 0.00 0.00 3.85
1845 1852 5.294356 ACTCATTACACAGCAAACTTCGTA 58.706 37.500 0.00 0.00 0.00 3.43
1846 1853 5.932303 ACTCATTACACAGCAAACTTCGTAT 59.068 36.000 0.00 0.00 0.00 3.06
1847 1854 6.128553 ACTCATTACACAGCAAACTTCGTATG 60.129 38.462 0.00 0.00 0.00 2.39
1848 1855 5.121611 TCATTACACAGCAAACTTCGTATGG 59.878 40.000 0.00 0.00 0.00 2.74
1849 1856 2.846193 ACACAGCAAACTTCGTATGGT 58.154 42.857 0.00 0.00 0.00 3.55
1850 1857 2.548057 ACACAGCAAACTTCGTATGGTG 59.452 45.455 2.96 2.96 45.43 4.17
1852 1859 3.896648 CAGCAAACTTCGTATGGTGTT 57.103 42.857 0.00 0.00 37.68 3.32
1853 1860 4.223320 CAGCAAACTTCGTATGGTGTTT 57.777 40.909 0.00 0.00 37.68 2.83
1854 1861 4.219033 CAGCAAACTTCGTATGGTGTTTC 58.781 43.478 0.00 0.00 37.68 2.78
1855 1862 4.024048 CAGCAAACTTCGTATGGTGTTTCT 60.024 41.667 0.00 0.00 37.68 2.52
1856 1863 4.213482 AGCAAACTTCGTATGGTGTTTCTC 59.787 41.667 0.00 0.00 31.30 2.87
1857 1864 4.213482 GCAAACTTCGTATGGTGTTTCTCT 59.787 41.667 0.00 0.00 31.30 3.10
1858 1865 5.277828 GCAAACTTCGTATGGTGTTTCTCTT 60.278 40.000 0.00 0.00 31.30 2.85
1859 1866 6.363473 CAAACTTCGTATGGTGTTTCTCTTC 58.637 40.000 0.00 0.00 31.30 2.87
1860 1867 4.566987 ACTTCGTATGGTGTTTCTCTTCC 58.433 43.478 0.00 0.00 0.00 3.46
1861 1868 4.283722 ACTTCGTATGGTGTTTCTCTTCCT 59.716 41.667 0.00 0.00 0.00 3.36
1862 1869 4.451629 TCGTATGGTGTTTCTCTTCCTC 57.548 45.455 0.00 0.00 0.00 3.71
1863 1870 3.830178 TCGTATGGTGTTTCTCTTCCTCA 59.170 43.478 0.00 0.00 0.00 3.86
1864 1871 4.282449 TCGTATGGTGTTTCTCTTCCTCAA 59.718 41.667 0.00 0.00 0.00 3.02
1865 1872 4.627467 CGTATGGTGTTTCTCTTCCTCAAG 59.373 45.833 0.00 0.00 0.00 3.02
1866 1873 3.492102 TGGTGTTTCTCTTCCTCAAGG 57.508 47.619 0.00 0.00 0.00 3.61
1867 1874 2.106511 TGGTGTTTCTCTTCCTCAAGGG 59.893 50.000 0.00 0.00 35.41 3.95
1868 1875 2.553247 GGTGTTTCTCTTCCTCAAGGGG 60.553 54.545 0.00 0.00 35.41 4.79
1869 1876 1.705186 TGTTTCTCTTCCTCAAGGGGG 59.295 52.381 0.00 0.00 35.41 5.40
1884 1891 3.067985 GGGGGCATTTGTGGTTGG 58.932 61.111 0.00 0.00 0.00 3.77
1885 1892 2.592032 GGGGGCATTTGTGGTTGGG 61.592 63.158 0.00 0.00 0.00 4.12
1886 1893 2.347114 GGGCATTTGTGGTTGGGC 59.653 61.111 0.00 0.00 0.00 5.36
1887 1894 2.048316 GGCATTTGTGGTTGGGCG 60.048 61.111 0.00 0.00 0.00 6.13
1888 1895 2.733945 GCATTTGTGGTTGGGCGT 59.266 55.556 0.00 0.00 0.00 5.68
1889 1896 1.372872 GCATTTGTGGTTGGGCGTC 60.373 57.895 0.00 0.00 0.00 5.19
1890 1897 1.288752 CATTTGTGGTTGGGCGTCC 59.711 57.895 0.00 0.00 0.00 4.79
1891 1898 1.906333 ATTTGTGGTTGGGCGTCCC 60.906 57.895 2.12 5.67 45.71 4.46
1918 1925 2.908688 AAAATTGTGGTTGGGCACTC 57.091 45.000 0.00 0.00 0.00 3.51
1919 1926 0.673437 AAATTGTGGTTGGGCACTCG 59.327 50.000 0.00 0.00 0.00 4.18
1920 1927 1.805428 AATTGTGGTTGGGCACTCGC 61.805 55.000 0.00 0.00 37.44 5.03
1921 1928 2.974692 ATTGTGGTTGGGCACTCGCA 62.975 55.000 0.00 0.00 41.24 5.10
1922 1929 2.672996 GTGGTTGGGCACTCGCAT 60.673 61.111 0.00 0.00 41.24 4.73
1923 1930 2.672651 TGGTTGGGCACTCGCATG 60.673 61.111 0.00 0.00 41.24 4.06
1924 1931 2.359850 GGTTGGGCACTCGCATGA 60.360 61.111 0.00 0.00 41.24 3.07
1925 1932 2.690778 GGTTGGGCACTCGCATGAC 61.691 63.158 0.00 0.00 41.24 3.06
1933 1940 4.552365 CTCGCATGACCCGGCCAT 62.552 66.667 2.24 0.00 0.00 4.40
1934 1941 4.108299 TCGCATGACCCGGCCATT 62.108 61.111 2.24 0.00 0.00 3.16
1935 1942 2.203139 CGCATGACCCGGCCATTA 60.203 61.111 2.24 0.00 0.00 1.90
1936 1943 1.600636 CGCATGACCCGGCCATTAT 60.601 57.895 2.24 0.00 0.00 1.28
1937 1944 1.172180 CGCATGACCCGGCCATTATT 61.172 55.000 2.24 0.00 0.00 1.40
1938 1945 0.598065 GCATGACCCGGCCATTATTC 59.402 55.000 2.24 0.00 0.00 1.75
1939 1946 1.247567 CATGACCCGGCCATTATTCC 58.752 55.000 2.24 0.00 0.00 3.01
1940 1947 1.149101 ATGACCCGGCCATTATTCCT 58.851 50.000 2.24 0.00 0.00 3.36
1941 1948 0.182537 TGACCCGGCCATTATTCCTG 59.817 55.000 2.24 0.00 0.00 3.86
1942 1949 1.152756 ACCCGGCCATTATTCCTGC 60.153 57.895 2.24 0.00 0.00 4.85
1943 1950 1.152777 CCCGGCCATTATTCCTGCA 60.153 57.895 2.24 0.00 0.00 4.41
1944 1951 0.754957 CCCGGCCATTATTCCTGCAA 60.755 55.000 2.24 0.00 0.00 4.08
1945 1952 1.110442 CCGGCCATTATTCCTGCAAA 58.890 50.000 2.24 0.00 0.00 3.68
1946 1953 1.202405 CCGGCCATTATTCCTGCAAAC 60.202 52.381 2.24 0.00 0.00 2.93
1947 1954 1.476085 CGGCCATTATTCCTGCAAACA 59.524 47.619 2.24 0.00 0.00 2.83
1948 1955 2.101249 CGGCCATTATTCCTGCAAACAT 59.899 45.455 2.24 0.00 0.00 2.71
1949 1956 3.430651 CGGCCATTATTCCTGCAAACATT 60.431 43.478 2.24 0.00 0.00 2.71
1950 1957 3.872771 GGCCATTATTCCTGCAAACATTG 59.127 43.478 0.00 0.00 0.00 2.82
1951 1958 4.506758 GCCATTATTCCTGCAAACATTGT 58.493 39.130 0.00 0.00 0.00 2.71
1952 1959 4.330620 GCCATTATTCCTGCAAACATTGTG 59.669 41.667 0.00 0.00 0.00 3.33
1953 1960 5.722263 CCATTATTCCTGCAAACATTGTGA 58.278 37.500 0.00 0.00 0.00 3.58
1954 1961 5.808540 CCATTATTCCTGCAAACATTGTGAG 59.191 40.000 0.00 0.00 0.00 3.51
1955 1962 6.350361 CCATTATTCCTGCAAACATTGTGAGA 60.350 38.462 0.00 0.00 0.00 3.27
1956 1963 6.647334 TTATTCCTGCAAACATTGTGAGAA 57.353 33.333 0.00 0.00 0.00 2.87
1957 1964 3.988379 TCCTGCAAACATTGTGAGAAC 57.012 42.857 0.00 0.00 0.00 3.01
1958 1965 2.622942 TCCTGCAAACATTGTGAGAACC 59.377 45.455 0.00 0.00 0.00 3.62
1959 1966 2.624838 CCTGCAAACATTGTGAGAACCT 59.375 45.455 0.00 0.00 0.00 3.50
1960 1967 3.820467 CCTGCAAACATTGTGAGAACCTA 59.180 43.478 0.00 0.00 0.00 3.08
1961 1968 4.320494 CCTGCAAACATTGTGAGAACCTAC 60.320 45.833 0.00 0.00 0.00 3.18
1962 1969 3.568007 TGCAAACATTGTGAGAACCTACC 59.432 43.478 0.00 0.00 0.00 3.18
1963 1970 3.821033 GCAAACATTGTGAGAACCTACCT 59.179 43.478 0.00 0.00 0.00 3.08
1964 1971 4.083271 GCAAACATTGTGAGAACCTACCTC 60.083 45.833 0.00 0.00 0.00 3.85
1965 1972 5.308825 CAAACATTGTGAGAACCTACCTCT 58.691 41.667 0.00 0.00 0.00 3.69
1966 1973 6.464222 CAAACATTGTGAGAACCTACCTCTA 58.536 40.000 0.00 0.00 0.00 2.43
1967 1974 6.875972 AACATTGTGAGAACCTACCTCTAT 57.124 37.500 0.00 0.00 0.00 1.98
1968 1975 6.875972 ACATTGTGAGAACCTACCTCTATT 57.124 37.500 0.00 0.00 0.00 1.73
1969 1976 6.644347 ACATTGTGAGAACCTACCTCTATTG 58.356 40.000 0.00 0.00 0.00 1.90
1970 1977 5.677319 TTGTGAGAACCTACCTCTATTGG 57.323 43.478 0.00 0.00 0.00 3.16
1971 1978 3.451178 TGTGAGAACCTACCTCTATTGGC 59.549 47.826 0.00 0.00 0.00 4.52
1972 1979 3.707102 GTGAGAACCTACCTCTATTGGCT 59.293 47.826 0.00 0.00 0.00 4.75
1973 1980 3.961408 TGAGAACCTACCTCTATTGGCTC 59.039 47.826 0.00 0.00 0.00 4.70
1974 1981 3.961408 GAGAACCTACCTCTATTGGCTCA 59.039 47.826 0.00 0.00 0.00 4.26
1975 1982 4.362677 AGAACCTACCTCTATTGGCTCAA 58.637 43.478 0.00 0.00 0.00 3.02
1976 1983 4.783227 AGAACCTACCTCTATTGGCTCAAA 59.217 41.667 0.00 0.00 0.00 2.69
1977 1984 5.250774 AGAACCTACCTCTATTGGCTCAAAA 59.749 40.000 0.00 0.00 0.00 2.44
1978 1985 5.514500 ACCTACCTCTATTGGCTCAAAAA 57.486 39.130 0.00 0.00 0.00 1.94
2005 2012 9.434420 AAAAAGAATCAAACACAGAATGACAAA 57.566 25.926 0.00 0.00 39.69 2.83
2006 2013 8.638685 AAAGAATCAAACACAGAATGACAAAG 57.361 30.769 0.00 0.00 39.69 2.77
2007 2014 7.338800 AGAATCAAACACAGAATGACAAAGT 57.661 32.000 0.00 0.00 39.69 2.66
2008 2015 7.420800 AGAATCAAACACAGAATGACAAAGTC 58.579 34.615 0.00 0.00 39.69 3.01
2009 2016 6.698008 ATCAAACACAGAATGACAAAGTCA 57.302 33.333 1.95 1.95 46.90 3.41
2010 2017 6.507958 TCAAACACAGAATGACAAAGTCAA 57.492 33.333 3.74 0.00 45.96 3.18
2011 2018 6.321717 TCAAACACAGAATGACAAAGTCAAC 58.678 36.000 3.74 2.39 45.96 3.18
2012 2019 4.536364 ACACAGAATGACAAAGTCAACG 57.464 40.909 3.74 0.00 45.96 4.10
2013 2020 3.938963 ACACAGAATGACAAAGTCAACGT 59.061 39.130 3.74 0.00 45.96 3.99
2014 2021 5.113383 ACACAGAATGACAAAGTCAACGTA 58.887 37.500 3.74 0.00 45.96 3.57
2015 2022 5.006358 ACACAGAATGACAAAGTCAACGTAC 59.994 40.000 3.74 0.00 45.96 3.67
2016 2023 5.006261 CACAGAATGACAAAGTCAACGTACA 59.994 40.000 3.74 0.00 45.96 2.90
2017 2024 5.583061 ACAGAATGACAAAGTCAACGTACAA 59.417 36.000 3.74 0.00 45.96 2.41
2018 2025 5.901884 CAGAATGACAAAGTCAACGTACAAC 59.098 40.000 3.74 0.00 45.96 3.32
2019 2026 4.806342 ATGACAAAGTCAACGTACAACC 57.194 40.909 3.74 0.00 45.96 3.77
2020 2027 2.604011 TGACAAAGTCAACGTACAACCG 59.396 45.455 0.00 0.00 39.78 4.44
2021 2028 1.328374 ACAAAGTCAACGTACAACCGC 59.672 47.619 0.00 0.00 0.00 5.68
2022 2029 0.578211 AAAGTCAACGTACAACCGCG 59.422 50.000 0.00 0.00 0.00 6.46
2023 2030 0.528249 AAGTCAACGTACAACCGCGT 60.528 50.000 4.92 0.00 43.64 6.01
2028 2035 2.516486 ACGTACAACCGCGTTAACC 58.484 52.632 4.92 0.00 38.21 2.85
2029 2036 1.274798 ACGTACAACCGCGTTAACCG 61.275 55.000 4.92 4.86 38.21 4.44
2035 2042 4.077543 CCGCGTTAACCGGTAGAC 57.922 61.111 20.78 9.03 40.84 2.59
2036 2043 1.517039 CCGCGTTAACCGGTAGACC 60.517 63.158 20.78 3.34 40.84 3.85
2037 2044 1.212490 CGCGTTAACCGGTAGACCA 59.788 57.895 8.00 0.00 36.94 4.02
2038 2045 0.388391 CGCGTTAACCGGTAGACCAA 60.388 55.000 8.00 0.00 36.94 3.67
2039 2046 1.794512 GCGTTAACCGGTAGACCAAA 58.205 50.000 8.00 0.00 36.94 3.28
2040 2047 1.460743 GCGTTAACCGGTAGACCAAAC 59.539 52.381 8.00 5.22 36.94 2.93
2041 2048 2.867647 GCGTTAACCGGTAGACCAAACT 60.868 50.000 8.00 0.00 36.94 2.66
2042 2049 3.392882 CGTTAACCGGTAGACCAAACTT 58.607 45.455 8.00 0.00 35.14 2.66
2043 2050 3.184986 CGTTAACCGGTAGACCAAACTTG 59.815 47.826 8.00 0.00 35.14 3.16
2044 2051 4.379652 GTTAACCGGTAGACCAAACTTGA 58.620 43.478 8.00 0.00 35.14 3.02
2045 2052 2.538512 ACCGGTAGACCAAACTTGAC 57.461 50.000 4.49 0.00 35.14 3.18
2046 2053 2.044758 ACCGGTAGACCAAACTTGACT 58.955 47.619 4.49 0.00 35.14 3.41
2047 2054 2.436911 ACCGGTAGACCAAACTTGACTT 59.563 45.455 4.49 0.00 35.14 3.01
2048 2055 2.806244 CCGGTAGACCAAACTTGACTTG 59.194 50.000 0.00 0.00 35.14 3.16
2049 2056 3.463944 CGGTAGACCAAACTTGACTTGT 58.536 45.455 0.00 0.00 35.14 3.16
2050 2057 3.493503 CGGTAGACCAAACTTGACTTGTC 59.506 47.826 0.00 0.00 35.14 3.18
2051 2058 3.493503 GGTAGACCAAACTTGACTTGTCG 59.506 47.826 0.00 0.00 35.64 4.35
2052 2059 3.261981 AGACCAAACTTGACTTGTCGT 57.738 42.857 0.00 0.00 0.00 4.34
2053 2060 3.195661 AGACCAAACTTGACTTGTCGTC 58.804 45.455 0.00 0.00 43.14 4.20
2054 2061 3.118738 AGACCAAACTTGACTTGTCGTCT 60.119 43.478 0.00 0.00 43.25 4.18
2055 2062 4.098960 AGACCAAACTTGACTTGTCGTCTA 59.901 41.667 4.33 0.00 43.25 2.59
2056 2063 4.761975 ACCAAACTTGACTTGTCGTCTAA 58.238 39.130 0.00 0.00 43.25 2.10
2057 2064 5.365619 ACCAAACTTGACTTGTCGTCTAAT 58.634 37.500 0.00 0.00 43.25 1.73
2058 2065 6.518493 ACCAAACTTGACTTGTCGTCTAATA 58.482 36.000 0.00 0.00 43.25 0.98
2059 2066 6.645415 ACCAAACTTGACTTGTCGTCTAATAG 59.355 38.462 0.00 0.00 43.25 1.73
2060 2067 6.645415 CCAAACTTGACTTGTCGTCTAATAGT 59.355 38.462 0.00 0.00 43.25 2.12
2061 2068 7.811236 CCAAACTTGACTTGTCGTCTAATAGTA 59.189 37.037 0.00 0.00 43.25 1.82
2062 2069 8.851416 CAAACTTGACTTGTCGTCTAATAGTAG 58.149 37.037 0.00 0.00 43.25 2.57
2063 2070 6.553524 ACTTGACTTGTCGTCTAATAGTAGC 58.446 40.000 0.00 0.00 43.25 3.58
2064 2071 6.150641 ACTTGACTTGTCGTCTAATAGTAGCA 59.849 38.462 0.00 0.00 43.25 3.49
2065 2072 6.505044 TGACTTGTCGTCTAATAGTAGCAA 57.495 37.500 0.00 0.00 43.25 3.91
2066 2073 6.916440 TGACTTGTCGTCTAATAGTAGCAAA 58.084 36.000 0.00 0.00 43.25 3.68
2067 2074 7.544622 TGACTTGTCGTCTAATAGTAGCAAAT 58.455 34.615 0.00 0.00 43.25 2.32
2068 2075 8.680001 TGACTTGTCGTCTAATAGTAGCAAATA 58.320 33.333 0.00 0.00 43.25 1.40
2069 2076 9.512435 GACTTGTCGTCTAATAGTAGCAAATAA 57.488 33.333 0.00 0.00 39.61 1.40
2070 2077 9.298774 ACTTGTCGTCTAATAGTAGCAAATAAC 57.701 33.333 0.00 0.00 0.00 1.89
2071 2078 9.297586 CTTGTCGTCTAATAGTAGCAAATAACA 57.702 33.333 0.00 0.00 0.00 2.41
2072 2079 8.624701 TGTCGTCTAATAGTAGCAAATAACAC 57.375 34.615 0.00 0.00 0.00 3.32
2073 2080 8.464404 TGTCGTCTAATAGTAGCAAATAACACT 58.536 33.333 0.00 0.00 0.00 3.55
2074 2081 9.941664 GTCGTCTAATAGTAGCAAATAACACTA 57.058 33.333 0.00 0.00 0.00 2.74
2093 2100 8.547967 AACACTATTTGACCATTGTACTACTG 57.452 34.615 0.00 0.00 0.00 2.74
2094 2101 6.594159 ACACTATTTGACCATTGTACTACTGC 59.406 38.462 0.00 0.00 0.00 4.40
2095 2102 6.593770 CACTATTTGACCATTGTACTACTGCA 59.406 38.462 0.00 0.00 0.00 4.41
2096 2103 7.280876 CACTATTTGACCATTGTACTACTGCAT 59.719 37.037 0.00 0.00 0.00 3.96
2097 2104 8.482943 ACTATTTGACCATTGTACTACTGCATA 58.517 33.333 0.00 0.00 0.00 3.14
2098 2105 9.494271 CTATTTGACCATTGTACTACTGCATAT 57.506 33.333 0.00 0.00 0.00 1.78
2100 2107 9.845740 ATTTGACCATTGTACTACTGCATATAA 57.154 29.630 0.00 0.00 0.00 0.98
2101 2108 8.657074 TTGACCATTGTACTACTGCATATAAC 57.343 34.615 0.00 0.00 0.00 1.89
2102 2109 7.787028 TGACCATTGTACTACTGCATATAACA 58.213 34.615 0.00 0.00 0.00 2.41
2103 2110 8.428852 TGACCATTGTACTACTGCATATAACAT 58.571 33.333 0.00 0.00 0.00 2.71
2104 2111 9.923143 GACCATTGTACTACTGCATATAACATA 57.077 33.333 0.00 0.00 0.00 2.29
2156 2163 9.490663 AAATTATCTGAAAAAGCGTAATCTTCG 57.509 29.630 0.00 0.00 0.00 3.79
2157 2164 7.821595 TTATCTGAAAAAGCGTAATCTTCGA 57.178 32.000 0.00 0.00 0.00 3.71
2158 2165 6.721571 ATCTGAAAAAGCGTAATCTTCGAA 57.278 33.333 0.00 0.00 0.00 3.71
2159 2166 6.533819 TCTGAAAAAGCGTAATCTTCGAAA 57.466 33.333 0.00 0.00 0.00 3.46
2160 2167 6.950545 TCTGAAAAAGCGTAATCTTCGAAAA 58.049 32.000 0.00 0.00 0.00 2.29
2161 2168 7.069569 TCTGAAAAAGCGTAATCTTCGAAAAG 58.930 34.615 0.00 0.00 0.00 2.27
2162 2169 6.950545 TGAAAAAGCGTAATCTTCGAAAAGA 58.049 32.000 0.00 0.00 45.36 2.52
2163 2170 7.411274 TGAAAAAGCGTAATCTTCGAAAAGAA 58.589 30.769 0.00 0.00 44.49 2.52
2164 2171 8.073768 TGAAAAAGCGTAATCTTCGAAAAGAAT 58.926 29.630 0.00 0.00 44.49 2.40
2165 2172 8.797266 AAAAAGCGTAATCTTCGAAAAGAATT 57.203 26.923 0.00 0.10 44.49 2.17
2166 2173 8.436156 AAAAGCGTAATCTTCGAAAAGAATTC 57.564 30.769 0.00 0.00 44.49 2.17
2167 2174 6.969828 AGCGTAATCTTCGAAAAGAATTCT 57.030 33.333 0.88 0.88 44.49 2.40
2168 2175 7.365840 AGCGTAATCTTCGAAAAGAATTCTT 57.634 32.000 15.11 15.11 44.49 2.52
2169 2176 8.475331 AGCGTAATCTTCGAAAAGAATTCTTA 57.525 30.769 20.76 4.15 44.49 2.10
2170 2177 8.932791 AGCGTAATCTTCGAAAAGAATTCTTAA 58.067 29.630 20.76 10.50 44.49 1.85
2171 2178 9.537848 GCGTAATCTTCGAAAAGAATTCTTAAA 57.462 29.630 20.76 11.69 44.49 1.52
2204 2211 9.863845 AAAAAGAACGAACTTGAATAGGAAAAA 57.136 25.926 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
588 592 0.614979 TGGAGAGGCCACTGTAGGTC 60.615 60.000 7.70 0.00 43.33 3.85
685 689 7.402862 ACTATAGCCACTAAAACCTTGTCATT 58.597 34.615 0.00 0.00 0.00 2.57
769 773 3.195396 AGCAACAACACACAATCCAACTT 59.805 39.130 0.00 0.00 0.00 2.66
891 895 1.687297 GGTGAGGGTCGGAGGAATCC 61.687 65.000 0.00 0.00 0.00 3.01
1126 1130 1.763770 CAGCAAGGGAGGTTGGAGT 59.236 57.895 0.00 0.00 0.00 3.85
1197 1201 2.551721 CCATGAAACAGTCAGAGCCACT 60.552 50.000 0.00 0.00 40.43 4.00
1501 1508 4.021807 GTGCTATCCCCCTTTTTCGAAAAA 60.022 41.667 28.86 28.86 36.53 1.94
1502 1509 3.508402 GTGCTATCCCCCTTTTTCGAAAA 59.492 43.478 19.08 19.08 0.00 2.29
1503 1510 3.086282 GTGCTATCCCCCTTTTTCGAAA 58.914 45.455 6.47 6.47 0.00 3.46
1504 1511 2.040545 TGTGCTATCCCCCTTTTTCGAA 59.959 45.455 0.00 0.00 0.00 3.71
1505 1512 1.631388 TGTGCTATCCCCCTTTTTCGA 59.369 47.619 0.00 0.00 0.00 3.71
1506 1513 1.743394 GTGTGCTATCCCCCTTTTTCG 59.257 52.381 0.00 0.00 0.00 3.46
1507 1514 3.087370 AGTGTGCTATCCCCCTTTTTC 57.913 47.619 0.00 0.00 0.00 2.29
1508 1515 3.165071 CAAGTGTGCTATCCCCCTTTTT 58.835 45.455 0.00 0.00 0.00 1.94
1509 1516 2.557452 CCAAGTGTGCTATCCCCCTTTT 60.557 50.000 0.00 0.00 0.00 2.27
1510 1517 1.005924 CCAAGTGTGCTATCCCCCTTT 59.994 52.381 0.00 0.00 0.00 3.11
1511 1518 0.625849 CCAAGTGTGCTATCCCCCTT 59.374 55.000 0.00 0.00 0.00 3.95
1512 1519 1.926426 GCCAAGTGTGCTATCCCCCT 61.926 60.000 0.00 0.00 0.00 4.79
1513 1520 1.453928 GCCAAGTGTGCTATCCCCC 60.454 63.158 0.00 0.00 0.00 5.40
1514 1521 0.034089 AAGCCAAGTGTGCTATCCCC 60.034 55.000 0.00 0.00 38.34 4.81
1515 1522 1.340017 TGAAGCCAAGTGTGCTATCCC 60.340 52.381 0.00 0.00 38.34 3.85
1516 1523 2.012673 CTGAAGCCAAGTGTGCTATCC 58.987 52.381 0.00 0.00 38.34 2.59
1517 1524 1.399791 GCTGAAGCCAAGTGTGCTATC 59.600 52.381 0.00 0.00 38.34 2.08
1518 1525 1.271543 TGCTGAAGCCAAGTGTGCTAT 60.272 47.619 0.00 0.00 38.34 2.97
1519 1526 0.108396 TGCTGAAGCCAAGTGTGCTA 59.892 50.000 0.00 0.00 38.34 3.49
1520 1527 0.538977 ATGCTGAAGCCAAGTGTGCT 60.539 50.000 0.00 0.00 41.89 4.40
1521 1528 0.388134 CATGCTGAAGCCAAGTGTGC 60.388 55.000 0.00 0.00 41.18 4.57
1522 1529 0.388134 GCATGCTGAAGCCAAGTGTG 60.388 55.000 11.37 0.00 41.18 3.82
1523 1530 0.824595 TGCATGCTGAAGCCAAGTGT 60.825 50.000 20.33 0.00 41.18 3.55
1524 1531 0.530744 ATGCATGCTGAAGCCAAGTG 59.469 50.000 20.33 0.00 41.18 3.16
1525 1532 2.133281 TATGCATGCTGAAGCCAAGT 57.867 45.000 20.33 0.00 41.18 3.16
1526 1533 3.513680 TTTATGCATGCTGAAGCCAAG 57.486 42.857 20.33 0.00 41.18 3.61
1527 1534 4.081586 TCAATTTATGCATGCTGAAGCCAA 60.082 37.500 20.33 2.61 41.18 4.52
1528 1535 3.447944 TCAATTTATGCATGCTGAAGCCA 59.552 39.130 20.33 0.00 41.18 4.75
1529 1536 4.049186 CTCAATTTATGCATGCTGAAGCC 58.951 43.478 20.33 0.00 41.18 4.35
1530 1537 4.928601 TCTCAATTTATGCATGCTGAAGC 58.071 39.130 20.33 0.00 42.50 3.86
1531 1538 5.402568 GCATCTCAATTTATGCATGCTGAAG 59.597 40.000 20.33 7.23 46.19 3.02
1532 1539 5.286438 GCATCTCAATTTATGCATGCTGAA 58.714 37.500 20.33 9.96 46.19 3.02
1533 1540 4.866921 GCATCTCAATTTATGCATGCTGA 58.133 39.130 20.33 11.85 46.19 4.26
1540 1547 4.746729 TGGTTGTGCATCTCAATTTATGC 58.253 39.130 9.29 9.29 46.92 3.14
1544 1551 8.916062 TCATATATTGGTTGTGCATCTCAATTT 58.084 29.630 10.97 7.54 31.55 1.82
1545 1552 8.467963 TCATATATTGGTTGTGCATCTCAATT 57.532 30.769 10.97 4.94 31.55 2.32
1546 1553 8.645814 ATCATATATTGGTTGTGCATCTCAAT 57.354 30.769 0.00 1.27 33.37 2.57
1547 1554 8.354426 CAATCATATATTGGTTGTGCATCTCAA 58.646 33.333 0.00 0.00 40.87 3.02
1548 1555 7.720515 TCAATCATATATTGGTTGTGCATCTCA 59.279 33.333 0.00 0.00 45.15 3.27
1549 1556 8.102800 TCAATCATATATTGGTTGTGCATCTC 57.897 34.615 0.00 0.00 45.15 2.75
1550 1557 8.645814 ATCAATCATATATTGGTTGTGCATCT 57.354 30.769 0.00 0.00 45.15 2.90
1558 1565 9.827198 ACCCACATAATCAATCATATATTGGTT 57.173 29.630 2.19 2.19 36.44 3.67
1559 1566 9.827198 AACCCACATAATCAATCATATATTGGT 57.173 29.630 0.00 0.00 0.00 3.67
1563 1570 9.690913 CTGGAACCCACATAATCAATCATATAT 57.309 33.333 0.00 0.00 0.00 0.86
1564 1571 8.668653 ACTGGAACCCACATAATCAATCATATA 58.331 33.333 0.00 0.00 0.00 0.86
1565 1572 7.529555 ACTGGAACCCACATAATCAATCATAT 58.470 34.615 0.00 0.00 0.00 1.78
1566 1573 6.910191 ACTGGAACCCACATAATCAATCATA 58.090 36.000 0.00 0.00 0.00 2.15
1567 1574 5.769835 ACTGGAACCCACATAATCAATCAT 58.230 37.500 0.00 0.00 0.00 2.45
1568 1575 5.191727 ACTGGAACCCACATAATCAATCA 57.808 39.130 0.00 0.00 0.00 2.57
1569 1576 6.530019 AAACTGGAACCCACATAATCAATC 57.470 37.500 0.00 0.00 0.00 2.67
1570 1577 6.933514 AAAACTGGAACCCACATAATCAAT 57.066 33.333 0.00 0.00 0.00 2.57
1571 1578 6.739331 AAAAACTGGAACCCACATAATCAA 57.261 33.333 0.00 0.00 0.00 2.57
1572 1579 6.209788 GGTAAAAACTGGAACCCACATAATCA 59.790 38.462 0.00 0.00 0.00 2.57
1573 1580 6.436218 AGGTAAAAACTGGAACCCACATAATC 59.564 38.462 0.00 0.00 32.10 1.75
1574 1581 6.319715 AGGTAAAAACTGGAACCCACATAAT 58.680 36.000 0.00 0.00 32.10 1.28
1575 1582 5.707495 AGGTAAAAACTGGAACCCACATAA 58.293 37.500 0.00 0.00 32.10 1.90
1576 1583 5.318630 GAGGTAAAAACTGGAACCCACATA 58.681 41.667 0.00 0.00 32.10 2.29
1577 1584 4.149598 GAGGTAAAAACTGGAACCCACAT 58.850 43.478 0.00 0.00 32.10 3.21
1578 1585 3.558033 GAGGTAAAAACTGGAACCCACA 58.442 45.455 0.00 0.00 32.10 4.17
1579 1586 2.889045 GGAGGTAAAAACTGGAACCCAC 59.111 50.000 0.00 0.00 32.10 4.61
1580 1587 2.158430 GGGAGGTAAAAACTGGAACCCA 60.158 50.000 0.00 0.00 35.41 4.51
1581 1588 2.522185 GGGAGGTAAAAACTGGAACCC 58.478 52.381 0.00 0.00 32.10 4.11
1582 1589 2.156917 CGGGAGGTAAAAACTGGAACC 58.843 52.381 0.00 0.00 0.00 3.62
1583 1590 3.130280 TCGGGAGGTAAAAACTGGAAC 57.870 47.619 0.00 0.00 0.00 3.62
1584 1591 4.376225 AATCGGGAGGTAAAAACTGGAA 57.624 40.909 0.00 0.00 0.00 3.53
1585 1592 4.376225 AAATCGGGAGGTAAAAACTGGA 57.624 40.909 0.00 0.00 0.00 3.86
1586 1593 5.005094 TGTAAATCGGGAGGTAAAAACTGG 58.995 41.667 0.00 0.00 0.00 4.00
1587 1594 6.563222 TTGTAAATCGGGAGGTAAAAACTG 57.437 37.500 0.00 0.00 0.00 3.16
1588 1595 7.173032 AGATTGTAAATCGGGAGGTAAAAACT 58.827 34.615 0.00 0.00 0.00 2.66
1589 1596 7.387119 AGATTGTAAATCGGGAGGTAAAAAC 57.613 36.000 0.00 0.00 0.00 2.43
1590 1597 8.301002 CAAAGATTGTAAATCGGGAGGTAAAAA 58.699 33.333 0.00 0.00 0.00 1.94
1591 1598 7.449086 ACAAAGATTGTAAATCGGGAGGTAAAA 59.551 33.333 0.00 0.00 43.27 1.52
1592 1599 6.943718 ACAAAGATTGTAAATCGGGAGGTAAA 59.056 34.615 0.00 0.00 43.27 2.01
1593 1600 6.478129 ACAAAGATTGTAAATCGGGAGGTAA 58.522 36.000 0.00 0.00 43.27 2.85
1594 1601 6.057321 ACAAAGATTGTAAATCGGGAGGTA 57.943 37.500 0.00 0.00 43.27 3.08
1595 1602 4.918588 ACAAAGATTGTAAATCGGGAGGT 58.081 39.130 0.00 0.00 43.27 3.85
1596 1603 5.878116 TGTACAAAGATTGTAAATCGGGAGG 59.122 40.000 4.64 0.00 46.72 4.30
1597 1604 6.594159 AGTGTACAAAGATTGTAAATCGGGAG 59.406 38.462 0.00 0.00 46.72 4.30
1598 1605 6.370442 CAGTGTACAAAGATTGTAAATCGGGA 59.630 38.462 0.00 0.00 46.72 5.14
1599 1606 6.370442 TCAGTGTACAAAGATTGTAAATCGGG 59.630 38.462 0.00 0.00 46.72 5.14
1600 1607 7.359262 TCAGTGTACAAAGATTGTAAATCGG 57.641 36.000 0.00 1.32 46.72 4.18
1605 1612 9.431887 GGAGTAATCAGTGTACAAAGATTGTAA 57.568 33.333 23.88 9.78 46.72 2.41
1606 1613 7.758076 CGGAGTAATCAGTGTACAAAGATTGTA 59.242 37.037 23.88 10.30 43.27 2.41
1607 1614 7.740027 ACGGAGTAATCAGTGTACAAAGATTGT 60.740 37.037 23.88 15.60 44.05 2.71
1608 1615 6.590292 ACGGAGTAATCAGTGTACAAAGATTG 59.410 38.462 23.88 14.41 41.94 2.67
1609 1616 6.698380 ACGGAGTAATCAGTGTACAAAGATT 58.302 36.000 21.02 21.02 41.94 2.40
1610 1617 6.282199 ACGGAGTAATCAGTGTACAAAGAT 57.718 37.500 0.00 0.88 41.94 2.40
1611 1618 5.717078 ACGGAGTAATCAGTGTACAAAGA 57.283 39.130 0.00 0.00 41.94 2.52
1612 1619 6.780706 AAACGGAGTAATCAGTGTACAAAG 57.219 37.500 0.00 0.00 45.00 2.77
1613 1620 6.366877 GCTAAACGGAGTAATCAGTGTACAAA 59.633 38.462 0.00 0.00 45.00 2.83
1614 1621 5.865552 GCTAAACGGAGTAATCAGTGTACAA 59.134 40.000 0.00 0.00 45.00 2.41
1615 1622 5.047872 TGCTAAACGGAGTAATCAGTGTACA 60.048 40.000 0.00 0.00 45.00 2.90
1616 1623 5.404946 TGCTAAACGGAGTAATCAGTGTAC 58.595 41.667 0.00 0.00 45.00 2.90
1617 1624 5.184479 ACTGCTAAACGGAGTAATCAGTGTA 59.816 40.000 0.00 0.00 45.00 2.90
1618 1625 4.021368 ACTGCTAAACGGAGTAATCAGTGT 60.021 41.667 0.00 0.00 45.00 3.55
1619 1626 4.495422 ACTGCTAAACGGAGTAATCAGTG 58.505 43.478 0.00 0.00 45.00 3.66
1620 1627 4.803098 ACTGCTAAACGGAGTAATCAGT 57.197 40.909 0.00 0.00 45.00 3.41
1628 1635 5.291128 ACGAATGAAATACTGCTAAACGGAG 59.709 40.000 0.00 0.00 37.07 4.63
1629 1636 5.172934 ACGAATGAAATACTGCTAAACGGA 58.827 37.500 0.00 0.00 0.00 4.69
1630 1637 5.464965 ACGAATGAAATACTGCTAAACGG 57.535 39.130 0.00 0.00 0.00 4.44
1631 1638 7.775729 AAAACGAATGAAATACTGCTAAACG 57.224 32.000 0.00 0.00 0.00 3.60
1633 1640 9.697250 CGATAAAACGAATGAAATACTGCTAAA 57.303 29.630 0.00 0.00 35.09 1.85
1634 1641 7.849026 GCGATAAAACGAATGAAATACTGCTAA 59.151 33.333 0.00 0.00 35.09 3.09
1635 1642 7.010645 TGCGATAAAACGAATGAAATACTGCTA 59.989 33.333 0.00 0.00 35.09 3.49
1636 1643 6.183360 TGCGATAAAACGAATGAAATACTGCT 60.183 34.615 0.00 0.00 35.09 4.24
1637 1644 5.963004 TGCGATAAAACGAATGAAATACTGC 59.037 36.000 0.00 0.00 35.09 4.40
1638 1645 8.547091 AATGCGATAAAACGAATGAAATACTG 57.453 30.769 0.00 0.00 31.42 2.74
1649 1656 9.828852 ACATTTTTAGTAAATGCGATAAAACGA 57.171 25.926 9.48 0.00 40.35 3.85
1653 1660 8.865001 GGCAACATTTTTAGTAAATGCGATAAA 58.135 29.630 10.50 0.00 40.35 1.40
1654 1661 8.029522 TGGCAACATTTTTAGTAAATGCGATAA 58.970 29.630 10.50 0.00 46.17 1.75
1655 1662 7.539436 TGGCAACATTTTTAGTAAATGCGATA 58.461 30.769 10.50 0.71 46.17 2.92
1656 1663 6.393990 TGGCAACATTTTTAGTAAATGCGAT 58.606 32.000 10.50 0.00 46.17 4.58
1657 1664 5.773575 TGGCAACATTTTTAGTAAATGCGA 58.226 33.333 10.50 5.72 46.17 5.10
1674 1681 7.655732 ACTTTAAATGGTGTAAAATCTGGCAAC 59.344 33.333 0.00 0.00 0.00 4.17
1675 1682 7.731054 ACTTTAAATGGTGTAAAATCTGGCAA 58.269 30.769 0.00 0.00 0.00 4.52
1676 1683 7.296628 ACTTTAAATGGTGTAAAATCTGGCA 57.703 32.000 0.00 0.00 0.00 4.92
1677 1684 8.601845 AAACTTTAAATGGTGTAAAATCTGGC 57.398 30.769 0.00 0.00 0.00 4.85
1683 1690 9.930693 ACTCACAAAACTTTAAATGGTGTAAAA 57.069 25.926 0.00 0.00 0.00 1.52
1684 1691 9.360093 CACTCACAAAACTTTAAATGGTGTAAA 57.640 29.630 0.00 0.00 0.00 2.01
1685 1692 7.976734 CCACTCACAAAACTTTAAATGGTGTAA 59.023 33.333 0.00 0.00 0.00 2.41
1686 1693 7.122948 ACCACTCACAAAACTTTAAATGGTGTA 59.877 33.333 2.77 0.00 35.44 2.90
1687 1694 6.071051 ACCACTCACAAAACTTTAAATGGTGT 60.071 34.615 2.77 0.00 35.44 4.16
1688 1695 6.337356 ACCACTCACAAAACTTTAAATGGTG 58.663 36.000 2.77 0.00 35.44 4.17
1689 1696 6.379988 AGACCACTCACAAAACTTTAAATGGT 59.620 34.615 3.14 3.14 39.38 3.55
1690 1697 6.697019 CAGACCACTCACAAAACTTTAAATGG 59.303 38.462 0.00 0.00 0.00 3.16
1691 1698 7.432252 GTCAGACCACTCACAAAACTTTAAATG 59.568 37.037 0.00 0.00 0.00 2.32
1692 1699 7.416326 GGTCAGACCACTCACAAAACTTTAAAT 60.416 37.037 15.43 0.00 38.42 1.40
1693 1700 6.127842 GGTCAGACCACTCACAAAACTTTAAA 60.128 38.462 15.43 0.00 38.42 1.52
1694 1701 5.355910 GGTCAGACCACTCACAAAACTTTAA 59.644 40.000 15.43 0.00 38.42 1.52
1695 1702 4.879545 GGTCAGACCACTCACAAAACTTTA 59.120 41.667 15.43 0.00 38.42 1.85
1696 1703 3.694566 GGTCAGACCACTCACAAAACTTT 59.305 43.478 15.43 0.00 38.42 2.66
1697 1704 3.279434 GGTCAGACCACTCACAAAACTT 58.721 45.455 15.43 0.00 38.42 2.66
1698 1705 2.741878 CGGTCAGACCACTCACAAAACT 60.742 50.000 20.13 0.00 38.47 2.66
1699 1706 1.597663 CGGTCAGACCACTCACAAAAC 59.402 52.381 20.13 0.00 38.47 2.43
1700 1707 1.474320 CCGGTCAGACCACTCACAAAA 60.474 52.381 20.13 0.00 38.47 2.44
1701 1708 0.105964 CCGGTCAGACCACTCACAAA 59.894 55.000 20.13 0.00 38.47 2.83
1702 1709 1.046472 ACCGGTCAGACCACTCACAA 61.046 55.000 20.13 0.00 38.47 3.33
1703 1710 1.456892 ACCGGTCAGACCACTCACA 60.457 57.895 20.13 0.00 38.47 3.58
1704 1711 1.006102 CACCGGTCAGACCACTCAC 60.006 63.158 20.13 0.00 38.47 3.51
1705 1712 2.207229 CCACCGGTCAGACCACTCA 61.207 63.158 20.13 0.00 38.47 3.41
1706 1713 2.657237 CCACCGGTCAGACCACTC 59.343 66.667 20.13 0.00 38.47 3.51
1707 1714 3.626924 GCCACCGGTCAGACCACT 61.627 66.667 20.13 0.00 38.47 4.00
1708 1715 3.178540 AAGCCACCGGTCAGACCAC 62.179 63.158 20.13 3.19 38.47 4.16
1709 1716 2.847234 AAGCCACCGGTCAGACCA 60.847 61.111 20.13 0.00 38.47 4.02
1710 1717 2.358737 CAAGCCACCGGTCAGACC 60.359 66.667 2.59 9.92 34.05 3.85
1711 1718 1.668151 GACAAGCCACCGGTCAGAC 60.668 63.158 2.59 0.00 0.00 3.51
1712 1719 1.691195 TTGACAAGCCACCGGTCAGA 61.691 55.000 2.59 0.00 41.99 3.27
1713 1720 1.227823 TTGACAAGCCACCGGTCAG 60.228 57.895 2.59 0.00 41.99 3.51
1714 1721 1.525077 GTTGACAAGCCACCGGTCA 60.525 57.895 2.59 0.00 39.60 4.02
1715 1722 2.258726 GGTTGACAAGCCACCGGTC 61.259 63.158 2.59 0.00 0.00 4.79
1716 1723 2.203294 GGTTGACAAGCCACCGGT 60.203 61.111 0.00 0.00 0.00 5.28
1717 1724 1.826054 TTGGTTGACAAGCCACCGG 60.826 57.895 14.49 0.00 34.02 5.28
1718 1725 1.358759 GTTGGTTGACAAGCCACCG 59.641 57.895 14.49 0.00 40.38 4.94
1719 1726 1.358759 CGTTGGTTGACAAGCCACC 59.641 57.895 14.49 0.94 40.38 4.61
1720 1727 1.358759 CCGTTGGTTGACAAGCCAC 59.641 57.895 14.49 12.45 40.38 5.01
1721 1728 2.485795 GCCGTTGGTTGACAAGCCA 61.486 57.895 14.49 9.66 40.38 4.75
1722 1729 2.335011 GCCGTTGGTTGACAAGCC 59.665 61.111 14.49 7.28 40.38 4.35
1723 1730 2.335011 GGCCGTTGGTTGACAAGC 59.665 61.111 10.46 10.46 40.38 4.01
1724 1731 0.817634 TCTGGCCGTTGGTTGACAAG 60.818 55.000 0.00 0.00 40.38 3.16
1725 1732 1.098712 GTCTGGCCGTTGGTTGACAA 61.099 55.000 0.00 0.00 36.54 3.18
1726 1733 1.525077 GTCTGGCCGTTGGTTGACA 60.525 57.895 0.00 0.00 0.00 3.58
1727 1734 1.507141 CTGTCTGGCCGTTGGTTGAC 61.507 60.000 0.00 0.00 0.00 3.18
1728 1735 1.227823 CTGTCTGGCCGTTGGTTGA 60.228 57.895 0.00 0.00 0.00 3.18
1729 1736 2.908073 GCTGTCTGGCCGTTGGTTG 61.908 63.158 0.00 0.00 0.00 3.77
1730 1737 2.594592 GCTGTCTGGCCGTTGGTT 60.595 61.111 0.00 0.00 0.00 3.67
1731 1738 3.537206 GAGCTGTCTGGCCGTTGGT 62.537 63.158 0.00 0.00 0.00 3.67
1732 1739 1.888436 TAGAGCTGTCTGGCCGTTGG 61.888 60.000 0.00 0.00 33.84 3.77
1733 1740 0.037326 TTAGAGCTGTCTGGCCGTTG 60.037 55.000 0.00 0.00 33.84 4.10
1734 1741 0.685097 TTTAGAGCTGTCTGGCCGTT 59.315 50.000 0.00 0.00 33.84 4.44
1735 1742 0.685097 TTTTAGAGCTGTCTGGCCGT 59.315 50.000 0.00 0.00 33.84 5.68
1736 1743 1.808411 TTTTTAGAGCTGTCTGGCCG 58.192 50.000 0.00 0.00 33.84 6.13
1737 1744 4.790765 AAATTTTTAGAGCTGTCTGGCC 57.209 40.909 0.00 0.00 33.84 5.36
1738 1745 6.151144 TCCTAAAATTTTTAGAGCTGTCTGGC 59.849 38.462 24.13 0.00 33.84 4.85
1739 1746 7.687941 TCCTAAAATTTTTAGAGCTGTCTGG 57.312 36.000 24.13 9.89 33.84 3.86
1740 1747 9.965824 TTTTCCTAAAATTTTTAGAGCTGTCTG 57.034 29.630 24.13 9.64 33.84 3.51
1741 1748 9.967346 GTTTTCCTAAAATTTTTAGAGCTGTCT 57.033 29.630 24.13 0.00 33.02 3.41
1742 1749 9.193133 GGTTTTCCTAAAATTTTTAGAGCTGTC 57.807 33.333 24.13 12.58 36.94 3.51
1743 1750 8.700973 TGGTTTTCCTAAAATTTTTAGAGCTGT 58.299 29.630 24.13 0.00 41.38 4.40
1744 1751 9.541143 TTGGTTTTCCTAAAATTTTTAGAGCTG 57.459 29.630 24.13 11.59 41.38 4.24
1745 1752 9.542462 GTTGGTTTTCCTAAAATTTTTAGAGCT 57.458 29.630 24.13 0.00 41.38 4.09
1746 1753 9.320352 TGTTGGTTTTCCTAAAATTTTTAGAGC 57.680 29.630 24.13 16.02 41.38 4.09
1748 1755 9.320352 GCTGTTGGTTTTCCTAAAATTTTTAGA 57.680 29.630 24.13 11.63 41.38 2.10
1749 1756 8.556194 GGCTGTTGGTTTTCCTAAAATTTTTAG 58.444 33.333 18.13 18.13 41.38 1.85
1750 1757 7.499563 GGGCTGTTGGTTTTCCTAAAATTTTTA 59.500 33.333 9.06 1.85 41.38 1.52
1751 1758 6.320164 GGGCTGTTGGTTTTCCTAAAATTTTT 59.680 34.615 9.06 0.00 41.38 1.94
1752 1759 5.825679 GGGCTGTTGGTTTTCCTAAAATTTT 59.174 36.000 8.75 8.75 41.38 1.82
1753 1760 5.131977 AGGGCTGTTGGTTTTCCTAAAATTT 59.868 36.000 0.00 0.00 41.38 1.82
1754 1761 4.658435 AGGGCTGTTGGTTTTCCTAAAATT 59.342 37.500 0.00 0.00 41.38 1.82
1755 1762 4.231273 AGGGCTGTTGGTTTTCCTAAAAT 58.769 39.130 0.00 0.00 41.38 1.82
1756 1763 3.648739 AGGGCTGTTGGTTTTCCTAAAA 58.351 40.909 0.00 0.00 41.38 1.52
1757 1764 3.322191 AGGGCTGTTGGTTTTCCTAAA 57.678 42.857 0.00 0.00 41.38 1.85
1758 1765 3.322191 AAGGGCTGTTGGTTTTCCTAA 57.678 42.857 0.00 0.00 41.38 2.69
1759 1766 3.322191 AAAGGGCTGTTGGTTTTCCTA 57.678 42.857 0.00 0.00 41.38 2.94
1760 1767 2.174685 AAAGGGCTGTTGGTTTTCCT 57.825 45.000 0.00 0.00 41.38 3.36
1761 1768 2.942376 CAAAAAGGGCTGTTGGTTTTCC 59.058 45.455 0.00 0.00 41.14 3.13
1762 1769 3.621268 GTCAAAAAGGGCTGTTGGTTTTC 59.379 43.478 0.00 0.00 0.00 2.29
1763 1770 3.263170 AGTCAAAAAGGGCTGTTGGTTTT 59.737 39.130 0.00 0.00 0.00 2.43
1764 1771 2.837591 AGTCAAAAAGGGCTGTTGGTTT 59.162 40.909 0.00 0.00 0.00 3.27
1765 1772 2.466846 AGTCAAAAAGGGCTGTTGGTT 58.533 42.857 0.00 0.00 0.00 3.67
1766 1773 2.159179 AGTCAAAAAGGGCTGTTGGT 57.841 45.000 0.00 0.00 0.00 3.67
1767 1774 3.541996 AAAGTCAAAAAGGGCTGTTGG 57.458 42.857 0.00 0.00 0.00 3.77
1788 1795 9.366216 GAAAAAGAAAGGCTGTTCTTCTAAAAA 57.634 29.630 18.44 0.00 45.09 1.94
1789 1796 7.700656 CGAAAAAGAAAGGCTGTTCTTCTAAAA 59.299 33.333 18.44 0.00 45.09 1.52
1790 1797 7.193595 CGAAAAAGAAAGGCTGTTCTTCTAAA 58.806 34.615 18.44 0.00 45.09 1.85
1791 1798 6.238648 CCGAAAAAGAAAGGCTGTTCTTCTAA 60.239 38.462 18.44 0.00 45.09 2.10
1792 1799 5.238650 CCGAAAAAGAAAGGCTGTTCTTCTA 59.761 40.000 18.44 0.00 45.09 2.10
1793 1800 4.036852 CCGAAAAAGAAAGGCTGTTCTTCT 59.963 41.667 18.44 8.68 45.09 2.85
1794 1801 4.290969 CCGAAAAAGAAAGGCTGTTCTTC 58.709 43.478 18.44 6.80 45.09 2.87
1796 1803 2.623416 CCCGAAAAAGAAAGGCTGTTCT 59.377 45.455 6.24 6.24 39.60 3.01
1797 1804 2.862530 GCCCGAAAAAGAAAGGCTGTTC 60.863 50.000 0.00 0.00 40.57 3.18
1798 1805 1.068588 GCCCGAAAAAGAAAGGCTGTT 59.931 47.619 0.00 0.00 40.57 3.16
1799 1806 0.673985 GCCCGAAAAAGAAAGGCTGT 59.326 50.000 0.00 0.00 40.57 4.40
1800 1807 0.038251 GGCCCGAAAAAGAAAGGCTG 60.038 55.000 0.00 0.00 43.36 4.85
1801 1808 1.185618 GGGCCCGAAAAAGAAAGGCT 61.186 55.000 5.69 0.00 43.36 4.58
1802 1809 1.292223 GGGCCCGAAAAAGAAAGGC 59.708 57.895 5.69 0.00 43.09 4.35
1803 1810 1.044611 TTGGGCCCGAAAAAGAAAGG 58.955 50.000 19.37 0.00 0.00 3.11
1804 1811 1.686587 AGTTGGGCCCGAAAAAGAAAG 59.313 47.619 15.39 0.00 0.00 2.62
1805 1812 1.684450 GAGTTGGGCCCGAAAAAGAAA 59.316 47.619 15.39 0.00 0.00 2.52
1806 1813 1.324383 GAGTTGGGCCCGAAAAAGAA 58.676 50.000 15.39 0.00 0.00 2.52
1807 1814 0.183971 TGAGTTGGGCCCGAAAAAGA 59.816 50.000 15.39 0.00 0.00 2.52
1808 1815 1.256812 ATGAGTTGGGCCCGAAAAAG 58.743 50.000 15.39 0.00 0.00 2.27
1809 1816 1.710816 AATGAGTTGGGCCCGAAAAA 58.289 45.000 15.39 0.00 0.00 1.94
1810 1817 2.164338 GTAATGAGTTGGGCCCGAAAA 58.836 47.619 15.39 0.00 0.00 2.29
1811 1818 1.074084 TGTAATGAGTTGGGCCCGAAA 59.926 47.619 15.39 0.51 0.00 3.46
1812 1819 0.693622 TGTAATGAGTTGGGCCCGAA 59.306 50.000 15.39 8.04 0.00 4.30
1813 1820 0.035820 GTGTAATGAGTTGGGCCCGA 60.036 55.000 19.37 14.11 0.00 5.14
1814 1821 0.322098 TGTGTAATGAGTTGGGCCCG 60.322 55.000 19.37 0.00 0.00 6.13
1815 1822 1.463674 CTGTGTAATGAGTTGGGCCC 58.536 55.000 17.59 17.59 0.00 5.80
1816 1823 0.811281 GCTGTGTAATGAGTTGGGCC 59.189 55.000 0.00 0.00 0.00 5.80
1817 1824 1.533625 TGCTGTGTAATGAGTTGGGC 58.466 50.000 0.00 0.00 0.00 5.36
1818 1825 3.569701 AGTTTGCTGTGTAATGAGTTGGG 59.430 43.478 0.00 0.00 0.00 4.12
1819 1826 4.836125 AGTTTGCTGTGTAATGAGTTGG 57.164 40.909 0.00 0.00 0.00 3.77
1820 1827 4.905866 CGAAGTTTGCTGTGTAATGAGTTG 59.094 41.667 0.00 0.00 0.00 3.16
1821 1828 4.574828 ACGAAGTTTGCTGTGTAATGAGTT 59.425 37.500 0.00 0.00 37.78 3.01
1822 1829 4.127171 ACGAAGTTTGCTGTGTAATGAGT 58.873 39.130 0.00 0.00 37.78 3.41
1823 1830 4.732285 ACGAAGTTTGCTGTGTAATGAG 57.268 40.909 0.00 0.00 37.78 2.90
1824 1831 5.121611 CCATACGAAGTTTGCTGTGTAATGA 59.878 40.000 0.00 0.00 37.78 2.57
1825 1832 5.106712 ACCATACGAAGTTTGCTGTGTAATG 60.107 40.000 0.00 0.00 37.78 1.90
1826 1833 5.001232 ACCATACGAAGTTTGCTGTGTAAT 58.999 37.500 0.00 0.00 37.78 1.89
1827 1834 4.212425 CACCATACGAAGTTTGCTGTGTAA 59.788 41.667 0.00 0.00 37.78 2.41
1828 1835 3.743911 CACCATACGAAGTTTGCTGTGTA 59.256 43.478 0.00 0.00 37.78 2.90
1829 1836 2.548057 CACCATACGAAGTTTGCTGTGT 59.452 45.455 0.00 0.00 37.78 3.72
1830 1837 2.548057 ACACCATACGAAGTTTGCTGTG 59.452 45.455 0.00 0.00 37.78 3.66
1831 1838 2.846193 ACACCATACGAAGTTTGCTGT 58.154 42.857 0.00 0.00 37.78 4.40
1832 1839 3.896648 AACACCATACGAAGTTTGCTG 57.103 42.857 0.00 0.00 37.78 4.41
1833 1840 4.134563 AGAAACACCATACGAAGTTTGCT 58.865 39.130 0.00 0.00 37.78 3.91
1834 1841 4.213482 AGAGAAACACCATACGAAGTTTGC 59.787 41.667 0.00 0.00 37.78 3.68
1835 1842 5.924475 AGAGAAACACCATACGAAGTTTG 57.076 39.130 0.00 0.00 37.78 2.93
1836 1843 5.469084 GGAAGAGAAACACCATACGAAGTTT 59.531 40.000 0.00 0.00 37.78 2.66
1837 1844 4.995487 GGAAGAGAAACACCATACGAAGTT 59.005 41.667 0.00 0.00 37.78 2.66
1839 1846 4.822026 AGGAAGAGAAACACCATACGAAG 58.178 43.478 0.00 0.00 0.00 3.79
1840 1847 4.282449 TGAGGAAGAGAAACACCATACGAA 59.718 41.667 0.00 0.00 0.00 3.85
1841 1848 3.830178 TGAGGAAGAGAAACACCATACGA 59.170 43.478 0.00 0.00 0.00 3.43
1842 1849 4.188247 TGAGGAAGAGAAACACCATACG 57.812 45.455 0.00 0.00 0.00 3.06
1843 1850 4.938226 CCTTGAGGAAGAGAAACACCATAC 59.062 45.833 0.00 0.00 37.39 2.39
1844 1851 4.019321 CCCTTGAGGAAGAGAAACACCATA 60.019 45.833 0.00 0.00 38.24 2.74
1845 1852 3.245052 CCCTTGAGGAAGAGAAACACCAT 60.245 47.826 0.00 0.00 38.24 3.55
1846 1853 2.106511 CCCTTGAGGAAGAGAAACACCA 59.893 50.000 0.00 0.00 38.24 4.17
1847 1854 2.553247 CCCCTTGAGGAAGAGAAACACC 60.553 54.545 0.00 0.00 38.24 4.16
1848 1855 2.553247 CCCCCTTGAGGAAGAGAAACAC 60.553 54.545 0.00 0.00 38.24 3.32
1849 1856 1.705186 CCCCCTTGAGGAAGAGAAACA 59.295 52.381 0.00 0.00 38.24 2.83
1850 1857 2.498644 CCCCCTTGAGGAAGAGAAAC 57.501 55.000 0.00 0.00 38.24 2.78
1867 1874 2.592032 CCCAACCACAAATGCCCCC 61.592 63.158 0.00 0.00 0.00 5.40
1868 1875 3.067985 CCCAACCACAAATGCCCC 58.932 61.111 0.00 0.00 0.00 5.80
1869 1876 2.347114 GCCCAACCACAAATGCCC 59.653 61.111 0.00 0.00 0.00 5.36
1870 1877 2.048316 CGCCCAACCACAAATGCC 60.048 61.111 0.00 0.00 0.00 4.40
1871 1878 1.372872 GACGCCCAACCACAAATGC 60.373 57.895 0.00 0.00 0.00 3.56
1872 1879 1.288752 GGACGCCCAACCACAAATG 59.711 57.895 0.00 0.00 0.00 2.32
1873 1880 1.906333 GGGACGCCCAACCACAAAT 60.906 57.895 9.72 0.00 44.65 2.32
1874 1881 2.519780 GGGACGCCCAACCACAAA 60.520 61.111 9.72 0.00 44.65 2.83
1898 1905 2.482839 CGAGTGCCCAACCACAATTTTT 60.483 45.455 0.00 0.00 38.18 1.94
1899 1906 1.068434 CGAGTGCCCAACCACAATTTT 59.932 47.619 0.00 0.00 38.18 1.82
1900 1907 0.673437 CGAGTGCCCAACCACAATTT 59.327 50.000 0.00 0.00 38.18 1.82
1901 1908 1.805428 GCGAGTGCCCAACCACAATT 61.805 55.000 0.00 0.00 38.18 2.32
1902 1909 2.268076 GCGAGTGCCCAACCACAAT 61.268 57.895 0.00 0.00 38.18 2.71
1903 1910 2.904866 GCGAGTGCCCAACCACAA 60.905 61.111 0.00 0.00 38.18 3.33
1904 1911 3.490031 ATGCGAGTGCCCAACCACA 62.490 57.895 0.00 0.00 41.78 4.17
1905 1912 2.672996 ATGCGAGTGCCCAACCAC 60.673 61.111 0.00 0.00 41.78 4.16
1906 1913 2.672651 CATGCGAGTGCCCAACCA 60.673 61.111 0.00 0.00 41.78 3.67
1907 1914 2.359850 TCATGCGAGTGCCCAACC 60.360 61.111 0.00 0.00 41.78 3.77
1908 1915 2.690778 GGTCATGCGAGTGCCCAAC 61.691 63.158 0.00 0.00 41.78 3.77
1909 1916 2.359850 GGTCATGCGAGTGCCCAA 60.360 61.111 0.00 0.00 41.78 4.12
1910 1917 4.408821 GGGTCATGCGAGTGCCCA 62.409 66.667 11.98 0.00 41.78 5.36
1916 1923 2.658679 TAATGGCCGGGTCATGCGAG 62.659 60.000 16.10 0.00 0.00 5.03
1917 1924 2.050836 ATAATGGCCGGGTCATGCGA 62.051 55.000 16.10 4.21 0.00 5.10
1918 1925 1.172180 AATAATGGCCGGGTCATGCG 61.172 55.000 16.10 0.00 0.00 4.73
1919 1926 0.598065 GAATAATGGCCGGGTCATGC 59.402 55.000 16.10 1.68 0.00 4.06
1920 1927 1.202927 AGGAATAATGGCCGGGTCATG 60.203 52.381 16.10 0.00 0.00 3.07
1921 1928 1.149101 AGGAATAATGGCCGGGTCAT 58.851 50.000 8.67 8.67 0.00 3.06
1922 1929 0.182537 CAGGAATAATGGCCGGGTCA 59.817 55.000 2.64 2.64 0.00 4.02
1923 1930 1.172812 GCAGGAATAATGGCCGGGTC 61.173 60.000 2.18 0.00 0.00 4.46
1924 1931 1.152756 GCAGGAATAATGGCCGGGT 60.153 57.895 2.18 0.00 0.00 5.28
1925 1932 0.754957 TTGCAGGAATAATGGCCGGG 60.755 55.000 2.18 0.00 0.00 5.73
1926 1933 1.110442 TTTGCAGGAATAATGGCCGG 58.890 50.000 0.00 0.00 0.00 6.13
1927 1934 1.476085 TGTTTGCAGGAATAATGGCCG 59.524 47.619 0.00 0.00 0.00 6.13
1928 1935 3.825143 ATGTTTGCAGGAATAATGGCC 57.175 42.857 0.00 0.00 0.00 5.36
1929 1936 4.330620 CACAATGTTTGCAGGAATAATGGC 59.669 41.667 0.00 0.00 0.00 4.40
1930 1937 5.722263 TCACAATGTTTGCAGGAATAATGG 58.278 37.500 0.00 0.00 0.00 3.16
1931 1938 6.623486 TCTCACAATGTTTGCAGGAATAATG 58.377 36.000 0.00 0.00 0.00 1.90
1932 1939 6.839124 TCTCACAATGTTTGCAGGAATAAT 57.161 33.333 0.00 0.00 0.00 1.28
1933 1940 6.446318 GTTCTCACAATGTTTGCAGGAATAA 58.554 36.000 0.00 0.00 0.00 1.40
1934 1941 5.048083 GGTTCTCACAATGTTTGCAGGAATA 60.048 40.000 0.00 0.00 0.00 1.75
1935 1942 4.262164 GGTTCTCACAATGTTTGCAGGAAT 60.262 41.667 0.00 0.00 0.00 3.01
1936 1943 3.068024 GGTTCTCACAATGTTTGCAGGAA 59.932 43.478 0.00 0.00 0.00 3.36
1937 1944 2.622942 GGTTCTCACAATGTTTGCAGGA 59.377 45.455 0.00 0.00 0.00 3.86
1938 1945 2.624838 AGGTTCTCACAATGTTTGCAGG 59.375 45.455 0.00 0.00 0.00 4.85
1939 1946 3.996150 AGGTTCTCACAATGTTTGCAG 57.004 42.857 0.00 0.00 0.00 4.41
1940 1947 3.568007 GGTAGGTTCTCACAATGTTTGCA 59.432 43.478 0.00 0.00 0.00 4.08
1941 1948 3.821033 AGGTAGGTTCTCACAATGTTTGC 59.179 43.478 0.00 0.00 0.00 3.68
1942 1949 5.308825 AGAGGTAGGTTCTCACAATGTTTG 58.691 41.667 0.00 0.00 33.92 2.93
1943 1950 5.568620 AGAGGTAGGTTCTCACAATGTTT 57.431 39.130 0.00 0.00 33.92 2.83
1944 1951 6.875972 ATAGAGGTAGGTTCTCACAATGTT 57.124 37.500 0.00 0.00 33.92 2.71
1945 1952 6.352222 CCAATAGAGGTAGGTTCTCACAATGT 60.352 42.308 0.00 0.00 33.92 2.71
1946 1953 6.051717 CCAATAGAGGTAGGTTCTCACAATG 58.948 44.000 0.00 0.00 33.92 2.82
1947 1954 5.396884 GCCAATAGAGGTAGGTTCTCACAAT 60.397 44.000 0.00 0.00 33.92 2.71
1948 1955 4.081087 GCCAATAGAGGTAGGTTCTCACAA 60.081 45.833 0.00 0.00 33.92 3.33
1949 1956 3.451178 GCCAATAGAGGTAGGTTCTCACA 59.549 47.826 0.00 0.00 33.92 3.58
1950 1957 3.707102 AGCCAATAGAGGTAGGTTCTCAC 59.293 47.826 0.00 0.00 33.92 3.51
1951 1958 3.961408 GAGCCAATAGAGGTAGGTTCTCA 59.039 47.826 0.00 0.00 33.92 3.27
1952 1959 3.961408 TGAGCCAATAGAGGTAGGTTCTC 59.039 47.826 0.00 0.00 33.20 2.87
1953 1960 3.995636 TGAGCCAATAGAGGTAGGTTCT 58.004 45.455 0.00 0.00 33.20 3.01
1954 1961 4.755266 TTGAGCCAATAGAGGTAGGTTC 57.245 45.455 0.00 0.00 32.71 3.62
1955 1962 5.514500 TTTTGAGCCAATAGAGGTAGGTT 57.486 39.130 0.00 0.00 0.00 3.50
1956 1963 5.514500 TTTTTGAGCCAATAGAGGTAGGT 57.486 39.130 0.00 0.00 0.00 3.08
1979 1986 9.434420 TTTGTCATTCTGTGTTTGATTCTTTTT 57.566 25.926 0.00 0.00 0.00 1.94
1980 1987 9.090692 CTTTGTCATTCTGTGTTTGATTCTTTT 57.909 29.630 0.00 0.00 0.00 2.27
1981 1988 8.253113 ACTTTGTCATTCTGTGTTTGATTCTTT 58.747 29.630 0.00 0.00 0.00 2.52
1982 1989 7.775120 ACTTTGTCATTCTGTGTTTGATTCTT 58.225 30.769 0.00 0.00 0.00 2.52
1983 1990 7.067372 TGACTTTGTCATTCTGTGTTTGATTCT 59.933 33.333 0.00 0.00 37.67 2.40
1984 1991 7.195646 TGACTTTGTCATTCTGTGTTTGATTC 58.804 34.615 0.00 0.00 37.67 2.52
1985 1992 7.099266 TGACTTTGTCATTCTGTGTTTGATT 57.901 32.000 0.00 0.00 37.67 2.57
1986 1993 6.698008 TGACTTTGTCATTCTGTGTTTGAT 57.302 33.333 0.00 0.00 37.67 2.57
1987 1994 6.321717 GTTGACTTTGTCATTCTGTGTTTGA 58.678 36.000 1.05 0.00 42.40 2.69
1988 1995 5.227805 CGTTGACTTTGTCATTCTGTGTTTG 59.772 40.000 1.05 0.00 42.40 2.93
1989 1996 5.106317 ACGTTGACTTTGTCATTCTGTGTTT 60.106 36.000 1.05 0.00 42.40 2.83
1990 1997 4.394920 ACGTTGACTTTGTCATTCTGTGTT 59.605 37.500 1.05 0.00 42.40 3.32
1991 1998 3.938963 ACGTTGACTTTGTCATTCTGTGT 59.061 39.130 1.05 0.00 42.40 3.72
1992 1999 4.536364 ACGTTGACTTTGTCATTCTGTG 57.464 40.909 1.05 0.00 42.40 3.66
1993 2000 5.113383 TGTACGTTGACTTTGTCATTCTGT 58.887 37.500 0.00 1.80 42.40 3.41
1994 2001 5.651172 TGTACGTTGACTTTGTCATTCTG 57.349 39.130 0.00 0.00 42.40 3.02
1995 2002 5.007332 GGTTGTACGTTGACTTTGTCATTCT 59.993 40.000 0.00 0.00 42.40 2.40
1996 2003 5.202640 GGTTGTACGTTGACTTTGTCATTC 58.797 41.667 0.00 0.00 42.40 2.67
1997 2004 4.260456 CGGTTGTACGTTGACTTTGTCATT 60.260 41.667 0.00 0.00 42.40 2.57
1998 2005 3.246699 CGGTTGTACGTTGACTTTGTCAT 59.753 43.478 0.00 0.00 42.40 3.06
1999 2006 2.604011 CGGTTGTACGTTGACTTTGTCA 59.396 45.455 0.00 0.00 41.09 3.58
2000 2007 2.598205 GCGGTTGTACGTTGACTTTGTC 60.598 50.000 0.00 0.00 35.98 3.18
2001 2008 1.328374 GCGGTTGTACGTTGACTTTGT 59.672 47.619 0.00 0.00 35.98 2.83
2002 2009 1.655325 CGCGGTTGTACGTTGACTTTG 60.655 52.381 0.00 0.00 35.98 2.77
2003 2010 0.578211 CGCGGTTGTACGTTGACTTT 59.422 50.000 0.00 0.00 35.98 2.66
2004 2011 0.528249 ACGCGGTTGTACGTTGACTT 60.528 50.000 12.47 0.00 40.09 3.01
2005 2012 1.066257 ACGCGGTTGTACGTTGACT 59.934 52.632 12.47 0.00 40.09 3.41
2006 2013 3.616595 ACGCGGTTGTACGTTGAC 58.383 55.556 12.47 0.00 40.09 3.18
2010 2017 1.274798 CGGTTAACGCGGTTGTACGT 61.275 55.000 12.47 0.00 46.07 3.57
2011 2018 1.411847 CGGTTAACGCGGTTGTACG 59.588 57.895 12.47 3.14 34.82 3.67
2012 2019 0.943835 ACCGGTTAACGCGGTTGTAC 60.944 55.000 25.89 2.82 38.94 2.90
2013 2020 0.598562 TACCGGTTAACGCGGTTGTA 59.401 50.000 31.97 19.38 41.08 2.41
2014 2021 0.667184 CTACCGGTTAACGCGGTTGT 60.667 55.000 31.97 18.22 41.08 3.32
2015 2022 0.388391 TCTACCGGTTAACGCGGTTG 60.388 55.000 31.97 29.50 41.08 3.77
2016 2023 0.388520 GTCTACCGGTTAACGCGGTT 60.389 55.000 31.97 21.31 41.08 4.44
2017 2024 1.212751 GTCTACCGGTTAACGCGGT 59.787 57.895 30.58 30.58 42.53 5.68
2018 2025 1.517039 GGTCTACCGGTTAACGCGG 60.517 63.158 24.87 24.87 42.52 6.46
2019 2026 0.388391 TTGGTCTACCGGTTAACGCG 60.388 55.000 15.04 3.53 42.52 6.01
2020 2027 1.460743 GTTTGGTCTACCGGTTAACGC 59.539 52.381 15.04 6.50 42.52 4.84
2021 2028 3.030668 AGTTTGGTCTACCGGTTAACG 57.969 47.619 15.04 0.00 43.80 3.18
2022 2029 4.212004 GTCAAGTTTGGTCTACCGGTTAAC 59.788 45.833 15.04 11.76 39.43 2.01
2023 2030 4.101430 AGTCAAGTTTGGTCTACCGGTTAA 59.899 41.667 15.04 0.00 39.43 2.01
2024 2031 3.642848 AGTCAAGTTTGGTCTACCGGTTA 59.357 43.478 15.04 0.00 39.43 2.85
2025 2032 2.436911 AGTCAAGTTTGGTCTACCGGTT 59.563 45.455 15.04 0.00 39.43 4.44
2026 2033 2.044758 AGTCAAGTTTGGTCTACCGGT 58.955 47.619 13.98 13.98 39.43 5.28
2027 2034 2.806244 CAAGTCAAGTTTGGTCTACCGG 59.194 50.000 0.00 0.00 39.43 5.28
2028 2035 3.463944 ACAAGTCAAGTTTGGTCTACCG 58.536 45.455 0.00 0.00 39.43 4.02
2029 2036 3.493503 CGACAAGTCAAGTTTGGTCTACC 59.506 47.826 0.72 0.00 0.00 3.18
2030 2037 4.117685 ACGACAAGTCAAGTTTGGTCTAC 58.882 43.478 0.72 0.00 0.00 2.59
2031 2038 4.395959 ACGACAAGTCAAGTTTGGTCTA 57.604 40.909 0.72 0.00 0.00 2.59
2032 2039 3.261981 ACGACAAGTCAAGTTTGGTCT 57.738 42.857 0.72 0.00 0.00 3.85
2044 2051 9.298774 GTTATTTGCTACTATTAGACGACAAGT 57.701 33.333 0.00 0.00 0.00 3.16
2045 2052 9.297586 TGTTATTTGCTACTATTAGACGACAAG 57.702 33.333 0.00 0.00 0.00 3.16
2046 2053 9.079833 GTGTTATTTGCTACTATTAGACGACAA 57.920 33.333 0.00 0.00 0.00 3.18
2047 2054 8.464404 AGTGTTATTTGCTACTATTAGACGACA 58.536 33.333 0.00 0.00 0.00 4.35
2048 2055 8.853469 AGTGTTATTTGCTACTATTAGACGAC 57.147 34.615 0.00 0.00 0.00 4.34
2067 2074 9.647797 CAGTAGTACAATGGTCAAATAGTGTTA 57.352 33.333 2.52 0.00 0.00 2.41
2068 2075 7.119262 GCAGTAGTACAATGGTCAAATAGTGTT 59.881 37.037 2.52 0.00 0.00 3.32
2069 2076 6.594159 GCAGTAGTACAATGGTCAAATAGTGT 59.406 38.462 2.52 0.00 0.00 3.55
2070 2077 6.593770 TGCAGTAGTACAATGGTCAAATAGTG 59.406 38.462 2.52 0.00 0.00 2.74
2071 2078 6.707290 TGCAGTAGTACAATGGTCAAATAGT 58.293 36.000 2.52 0.00 0.00 2.12
2072 2079 7.792374 ATGCAGTAGTACAATGGTCAAATAG 57.208 36.000 2.52 0.00 0.00 1.73
2074 2081 9.845740 TTATATGCAGTAGTACAATGGTCAAAT 57.154 29.630 2.52 0.00 0.00 2.32
2075 2082 9.104965 GTTATATGCAGTAGTACAATGGTCAAA 57.895 33.333 2.52 0.00 0.00 2.69
2076 2083 8.261522 TGTTATATGCAGTAGTACAATGGTCAA 58.738 33.333 2.52 0.00 0.00 3.18
2077 2084 7.787028 TGTTATATGCAGTAGTACAATGGTCA 58.213 34.615 2.52 0.00 0.00 4.02
2078 2085 8.833231 ATGTTATATGCAGTAGTACAATGGTC 57.167 34.615 2.52 0.00 0.00 4.02
2130 2137 9.490663 CGAAGATTACGCTTTTTCAGATAATTT 57.509 29.630 0.00 0.00 0.00 1.82
2131 2138 8.879759 TCGAAGATTACGCTTTTTCAGATAATT 58.120 29.630 0.00 0.00 0.00 1.40
2132 2139 8.420374 TCGAAGATTACGCTTTTTCAGATAAT 57.580 30.769 0.00 0.00 0.00 1.28
2133 2140 7.821595 TCGAAGATTACGCTTTTTCAGATAA 57.178 32.000 0.00 0.00 0.00 1.75
2134 2141 7.821595 TTCGAAGATTACGCTTTTTCAGATA 57.178 32.000 0.00 0.00 35.04 1.98
2135 2142 6.721571 TTCGAAGATTACGCTTTTTCAGAT 57.278 33.333 0.00 0.00 35.04 2.90
2136 2143 6.533819 TTTCGAAGATTACGCTTTTTCAGA 57.466 33.333 0.00 0.00 35.04 3.27
2137 2144 7.069569 TCTTTTCGAAGATTACGCTTTTTCAG 58.930 34.615 0.00 0.00 35.04 3.02
2138 2145 6.950545 TCTTTTCGAAGATTACGCTTTTTCA 58.049 32.000 0.00 0.00 35.04 2.69
2139 2146 7.831750 TTCTTTTCGAAGATTACGCTTTTTC 57.168 32.000 0.00 0.00 35.04 2.29
2140 2147 8.797266 AATTCTTTTCGAAGATTACGCTTTTT 57.203 26.923 0.00 0.00 35.04 1.94
2141 2148 8.290325 AGAATTCTTTTCGAAGATTACGCTTTT 58.710 29.630 0.88 0.00 35.04 2.27
2142 2149 7.807680 AGAATTCTTTTCGAAGATTACGCTTT 58.192 30.769 0.88 0.00 35.04 3.51
2143 2150 7.365840 AGAATTCTTTTCGAAGATTACGCTT 57.634 32.000 0.88 0.00 35.04 4.68
2144 2151 6.969828 AGAATTCTTTTCGAAGATTACGCT 57.030 33.333 0.88 0.00 35.04 5.07
2145 2152 9.537848 TTTAAGAATTCTTTTCGAAGATTACGC 57.462 29.630 25.02 0.00 37.40 4.42
2178 2185 9.863845 TTTTTCCTATTCAAGTTCGTTCTTTTT 57.136 25.926 0.00 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.