Multiple sequence alignment - TraesCS6B01G091500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G091500 chr6B 100.000 6162 0 0 1 6162 67325498 67319337 0.000000e+00 11380.0
1 TraesCS6B01G091500 chr6B 96.875 3744 110 6 1444 5184 67131531 67127792 0.000000e+00 6259.0
2 TraesCS6B01G091500 chr6B 81.392 3203 508 71 1887 5032 66991894 66988723 0.000000e+00 2532.0
3 TraesCS6B01G091500 chr6B 80.634 1957 312 47 1887 3815 66971097 66969180 0.000000e+00 1452.0
4 TraesCS6B01G091500 chr6B 82.246 1656 246 41 2157 3783 67410980 67409344 0.000000e+00 1386.0
5 TraesCS6B01G091500 chr6B 79.465 1943 307 72 1898 3808 66755673 66753791 0.000000e+00 1293.0
6 TraesCS6B01G091500 chr6B 78.693 1990 322 76 1892 3839 66786269 66784340 0.000000e+00 1232.0
7 TraesCS6B01G091500 chr6B 79.244 1614 261 57 2952 4522 67229129 67227547 0.000000e+00 1057.0
8 TraesCS6B01G091500 chr6B 84.637 1074 151 12 1887 2954 67258779 67257714 0.000000e+00 1057.0
9 TraesCS6B01G091500 chr6B 93.440 564 31 6 5179 5738 67127764 67127203 0.000000e+00 832.0
10 TraesCS6B01G091500 chr6B 95.093 428 21 0 5735 6162 67114813 67114386 0.000000e+00 675.0
11 TraesCS6B01G091500 chr6B 80.158 761 140 10 4213 4970 66784242 66783490 5.390000e-155 558.0
12 TraesCS6B01G091500 chr6B 93.838 357 15 5 1042 1391 67131887 67131531 1.180000e-146 531.0
13 TraesCS6B01G091500 chr6B 76.923 624 110 20 4571 5175 67204826 67204218 2.140000e-84 324.0
14 TraesCS6B01G091500 chr6B 83.690 374 26 23 731 1077 67132253 67131888 2.770000e-83 320.0
15 TraesCS6B01G091500 chr6B 79.612 412 60 19 919 1318 67259390 67258991 2.190000e-69 274.0
16 TraesCS6B01G091500 chr6B 81.020 353 53 10 959 1303 68748325 68748671 1.020000e-67 268.0
17 TraesCS6B01G091500 chr6B 79.293 396 63 14 917 1303 68783862 68783477 6.130000e-65 259.0
18 TraesCS6B01G091500 chr6B 93.023 129 6 3 263 389 67133106 67132979 1.050000e-42 185.0
19 TraesCS6B01G091500 chr6B 93.478 46 3 0 731 776 67259618 67259573 1.110000e-07 69.4
20 TraesCS6B01G091500 chr6D 92.848 3733 231 21 1469 5184 31754860 31751147 0.000000e+00 5382.0
21 TraesCS6B01G091500 chr6D 83.316 1936 268 43 1887 3790 31770570 31768658 0.000000e+00 1735.0
22 TraesCS6B01G091500 chr6D 83.041 1940 270 45 1887 3790 23440453 23438537 0.000000e+00 1705.0
23 TraesCS6B01G091500 chr6D 92.435 727 38 12 731 1444 31755572 31754850 0.000000e+00 1022.0
24 TraesCS6B01G091500 chr6D 92.000 725 43 10 731 1444 23425584 23424864 0.000000e+00 1003.0
25 TraesCS6B01G091500 chr6D 80.927 1143 195 16 3889 5016 23438469 23437335 0.000000e+00 881.0
26 TraesCS6B01G091500 chr6D 80.840 1143 196 16 3889 5016 31768590 31767456 0.000000e+00 876.0
27 TraesCS6B01G091500 chr6D 82.888 187 21 7 1413 1589 388209928 388209743 2.300000e-34 158.0
28 TraesCS6B01G091500 chr6D 86.000 50 5 2 5414 5462 193255195 193255147 1.100000e-02 52.8
29 TraesCS6B01G091500 chr2B 80.240 3082 487 79 1909 4920 696670289 696673318 0.000000e+00 2206.0
30 TraesCS6B01G091500 chr6A 79.273 3083 519 90 1887 4918 36108982 36105969 0.000000e+00 2043.0
31 TraesCS6B01G091500 chr6A 83.136 1945 279 38 1887 3795 36252880 36250949 0.000000e+00 1729.0
32 TraesCS6B01G091500 chr6A 85.830 494 48 7 731 1214 36110721 36110240 7.130000e-139 505.0
33 TraesCS6B01G091500 chr6A 77.413 549 81 31 793 1314 36253616 36253084 2.810000e-73 287.0
34 TraesCS6B01G091500 chr6A 82.209 163 17 7 238 388 36254062 36253900 5.010000e-26 130.0
35 TraesCS6B01G091500 chr2D 79.788 2642 415 76 2342 4920 579386981 579389566 0.000000e+00 1810.0
36 TraesCS6B01G091500 chr2A 80.173 2194 330 66 2342 4476 717137789 717139936 0.000000e+00 1544.0
37 TraesCS6B01G091500 chr2A 85.235 298 44 0 4623 4920 717140094 717140391 2.160000e-79 307.0
38 TraesCS6B01G091500 chr7B 91.823 746 45 6 5406 6146 68839580 68840314 0.000000e+00 1026.0
39 TraesCS6B01G091500 chrUn 86.170 188 26 0 1031 1218 100489792 100489979 2.910000e-48 204.0
40 TraesCS6B01G091500 chr7A 92.754 138 8 2 5411 5548 111835564 111835699 1.350000e-46 198.0
41 TraesCS6B01G091500 chr1A 81.197 117 17 4 5519 5630 6475868 6475752 8.510000e-14 89.8
42 TraesCS6B01G091500 chr3A 81.818 110 15 4 5519 5623 177677244 177677353 3.060000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G091500 chr6B 67319337 67325498 6161 True 11380.000000 11380 100.000000 1 6162 1 chr6B.!!$R7 6161
1 TraesCS6B01G091500 chr6B 66988723 66991894 3171 True 2532.000000 2532 81.392000 1887 5032 1 chr6B.!!$R3 3145
2 TraesCS6B01G091500 chr6B 67127203 67133106 5903 True 1625.400000 6259 92.173200 263 5738 5 chr6B.!!$R11 5475
3 TraesCS6B01G091500 chr6B 66969180 66971097 1917 True 1452.000000 1452 80.634000 1887 3815 1 chr6B.!!$R2 1928
4 TraesCS6B01G091500 chr6B 67409344 67410980 1636 True 1386.000000 1386 82.246000 2157 3783 1 chr6B.!!$R8 1626
5 TraesCS6B01G091500 chr6B 66753791 66755673 1882 True 1293.000000 1293 79.465000 1898 3808 1 chr6B.!!$R1 1910
6 TraesCS6B01G091500 chr6B 67227547 67229129 1582 True 1057.000000 1057 79.244000 2952 4522 1 chr6B.!!$R6 1570
7 TraesCS6B01G091500 chr6B 66783490 66786269 2779 True 895.000000 1232 79.425500 1892 4970 2 chr6B.!!$R10 3078
8 TraesCS6B01G091500 chr6B 67257714 67259618 1904 True 466.800000 1057 85.909000 731 2954 3 chr6B.!!$R12 2223
9 TraesCS6B01G091500 chr6B 67204218 67204826 608 True 324.000000 324 76.923000 4571 5175 1 chr6B.!!$R5 604
10 TraesCS6B01G091500 chr6D 31751147 31755572 4425 True 3202.000000 5382 92.641500 731 5184 2 chr6D.!!$R5 4453
11 TraesCS6B01G091500 chr6D 31767456 31770570 3114 True 1305.500000 1735 82.078000 1887 5016 2 chr6D.!!$R6 3129
12 TraesCS6B01G091500 chr6D 23437335 23440453 3118 True 1293.000000 1705 81.984000 1887 5016 2 chr6D.!!$R4 3129
13 TraesCS6B01G091500 chr6D 23424864 23425584 720 True 1003.000000 1003 92.000000 731 1444 1 chr6D.!!$R1 713
14 TraesCS6B01G091500 chr2B 696670289 696673318 3029 False 2206.000000 2206 80.240000 1909 4920 1 chr2B.!!$F1 3011
15 TraesCS6B01G091500 chr6A 36105969 36110721 4752 True 1274.000000 2043 82.551500 731 4918 2 chr6A.!!$R1 4187
16 TraesCS6B01G091500 chr6A 36250949 36254062 3113 True 715.333333 1729 80.919333 238 3795 3 chr6A.!!$R2 3557
17 TraesCS6B01G091500 chr2D 579386981 579389566 2585 False 1810.000000 1810 79.788000 2342 4920 1 chr2D.!!$F1 2578
18 TraesCS6B01G091500 chr2A 717137789 717140391 2602 False 925.500000 1544 82.704000 2342 4920 2 chr2A.!!$F1 2578
19 TraesCS6B01G091500 chr7B 68839580 68840314 734 False 1026.000000 1026 91.823000 5406 6146 1 chr7B.!!$F1 740

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
130 131 0.030705 CTCCCCCTCCAGGAATCAGA 60.031 60.000 0.00 0.00 38.24 3.27 F
170 171 0.038251 GTGACCGTGACTCAGCATCA 60.038 55.000 0.00 0.00 0.00 3.07 F
441 649 0.097674 CTGGCTAAGCAATGCACGAC 59.902 55.000 8.35 0.00 0.00 4.34 F
823 1246 0.179062 AGAATGGATCCACGCAGAGC 60.179 55.000 18.99 1.46 0.00 4.09 F
824 1247 0.462581 GAATGGATCCACGCAGAGCA 60.463 55.000 18.99 0.00 0.00 4.26 F
915 1368 0.520404 CAAAGGCACAGCAGTAGCAG 59.480 55.000 6.15 0.00 45.49 4.24 F
1625 2856 0.681243 CTTGAACCTTGGCTAGCCCC 60.681 60.000 30.81 12.82 34.56 5.80 F
1692 2923 0.877071 TGTGTCTACTCCGAACGGAC 59.123 55.000 12.04 3.68 39.76 4.79 F
2111 3485 1.278985 TCCATGGTGACGATCTGCTTT 59.721 47.619 12.58 0.00 0.00 3.51 F
2690 4080 1.547820 TCTGAGCTACCTGCAGAACTG 59.452 52.381 17.39 0.00 45.94 3.16 F
4096 5599 1.322538 AATGGCGAGGAAACCATGGC 61.323 55.000 13.04 0.00 46.04 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1565 2796 0.387929 GTGTGGTTCGGTCTGAGTCA 59.612 55.000 0.00 0.0 0.00 3.41 R
1570 2801 0.682852 TAAGGGTGTGGTTCGGTCTG 59.317 55.000 0.00 0.0 0.00 3.51 R
1665 2896 1.478510 CGGAGTAGACACAGCATCCTT 59.521 52.381 0.00 0.0 0.00 3.36 R
2690 4080 1.453928 GCCATGTTCCTAGTGGGCC 60.454 63.158 0.00 0.0 35.42 5.80 R
2780 4170 9.631452 GGTAGTCGTTTATATGTTTATACCTCC 57.369 37.037 0.00 0.0 0.00 4.30 R
2855 4258 8.169268 CCAACAGTTCTAGCGTTTTTCTATTAG 58.831 37.037 0.00 0.0 0.00 1.73 R
2970 4383 2.437281 AGATCCATCCACCATCTGTGTC 59.563 50.000 0.00 0.0 43.85 3.67 R
3932 5422 8.156820 TCAGTTGAGATTATTCAAGGAAAGTCA 58.843 33.333 0.00 0.0 37.72 3.41 R
4071 5574 3.492337 TGGTTTCCTCGCCATTTTAGTT 58.508 40.909 0.00 0.0 0.00 2.24 R
4550 6132 1.490574 AGATGAGCACCCACTAGGAC 58.509 55.000 0.00 0.0 39.89 3.85 R
5343 6981 0.106519 GTCTATGCATGGCCCCTGTT 60.107 55.000 10.16 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.396435 TGCCCTTATGCCATCCTACG 59.604 55.000 0.00 0.00 0.00 3.51
20 21 0.321653 GCCCTTATGCCATCCTACGG 60.322 60.000 0.00 0.00 0.00 4.02
21 22 1.348064 CCCTTATGCCATCCTACGGA 58.652 55.000 0.00 0.00 35.55 4.69
22 23 1.002087 CCCTTATGCCATCCTACGGAC 59.998 57.143 0.00 0.00 32.98 4.79
23 24 1.336887 CCTTATGCCATCCTACGGACG 60.337 57.143 0.00 0.00 32.98 4.79
24 25 1.340248 CTTATGCCATCCTACGGACGT 59.660 52.381 1.98 1.98 32.98 4.34
25 26 1.405872 TATGCCATCCTACGGACGTT 58.594 50.000 1.57 0.00 32.98 3.99
26 27 0.104304 ATGCCATCCTACGGACGTTC 59.896 55.000 1.57 0.00 32.98 3.95
27 28 0.968901 TGCCATCCTACGGACGTTCT 60.969 55.000 1.57 0.00 32.98 3.01
28 29 0.248949 GCCATCCTACGGACGTTCTC 60.249 60.000 1.57 0.00 32.98 2.87
29 30 1.390565 CCATCCTACGGACGTTCTCT 58.609 55.000 1.57 0.00 32.98 3.10
30 31 1.065701 CCATCCTACGGACGTTCTCTG 59.934 57.143 1.57 0.00 32.98 3.35
31 32 1.743958 CATCCTACGGACGTTCTCTGT 59.256 52.381 1.57 0.00 41.74 3.41
32 33 1.162698 TCCTACGGACGTTCTCTGTG 58.837 55.000 1.57 0.00 39.05 3.66
33 34 0.456312 CCTACGGACGTTCTCTGTGC 60.456 60.000 1.57 0.00 39.05 4.57
34 35 0.240145 CTACGGACGTTCTCTGTGCA 59.760 55.000 1.57 0.00 39.05 4.57
35 36 0.885879 TACGGACGTTCTCTGTGCAT 59.114 50.000 1.57 0.00 39.05 3.96
36 37 0.885879 ACGGACGTTCTCTGTGCATA 59.114 50.000 0.00 0.00 37.09 3.14
37 38 1.135373 ACGGACGTTCTCTGTGCATAG 60.135 52.381 3.68 3.68 37.09 2.23
38 39 1.135373 CGGACGTTCTCTGTGCATAGT 60.135 52.381 10.52 0.00 0.00 2.12
39 40 2.671351 CGGACGTTCTCTGTGCATAGTT 60.671 50.000 10.52 0.00 0.00 2.24
40 41 3.427098 CGGACGTTCTCTGTGCATAGTTA 60.427 47.826 10.52 0.00 0.00 2.24
41 42 4.106197 GGACGTTCTCTGTGCATAGTTAG 58.894 47.826 10.52 1.64 0.00 2.34
42 43 4.106197 GACGTTCTCTGTGCATAGTTAGG 58.894 47.826 10.52 5.60 0.00 2.69
43 44 3.510360 ACGTTCTCTGTGCATAGTTAGGT 59.490 43.478 10.52 6.15 0.00 3.08
44 45 3.859961 CGTTCTCTGTGCATAGTTAGGTG 59.140 47.826 10.52 0.00 0.00 4.00
45 46 4.184629 GTTCTCTGTGCATAGTTAGGTGG 58.815 47.826 10.52 0.00 0.00 4.61
46 47 2.168521 TCTCTGTGCATAGTTAGGTGGC 59.831 50.000 10.52 0.00 0.00 5.01
47 48 2.169352 CTCTGTGCATAGTTAGGTGGCT 59.831 50.000 10.52 0.00 0.00 4.75
48 49 3.371034 TCTGTGCATAGTTAGGTGGCTA 58.629 45.455 10.52 0.00 0.00 3.93
49 50 3.384789 TCTGTGCATAGTTAGGTGGCTAG 59.615 47.826 10.52 0.00 0.00 3.42
50 51 2.434336 TGTGCATAGTTAGGTGGCTAGG 59.566 50.000 0.00 0.00 0.00 3.02
51 52 1.416401 TGCATAGTTAGGTGGCTAGGC 59.584 52.381 9.85 9.85 42.94 3.93
52 53 1.416401 GCATAGTTAGGTGGCTAGGCA 59.584 52.381 16.16 16.16 42.41 4.75
53 54 2.807108 GCATAGTTAGGTGGCTAGGCAC 60.807 54.545 34.86 34.86 42.41 5.01
54 55 2.241281 TAGTTAGGTGGCTAGGCACA 57.759 50.000 39.98 24.59 0.00 4.57
55 56 0.613777 AGTTAGGTGGCTAGGCACAC 59.386 55.000 39.98 31.31 36.89 3.82
58 59 4.778143 GGTGGCTAGGCACACCGG 62.778 72.222 39.98 0.00 46.61 5.28
59 60 4.016706 GTGGCTAGGCACACCGGT 62.017 66.667 36.71 0.00 42.76 5.28
60 61 3.702048 TGGCTAGGCACACCGGTC 61.702 66.667 16.16 0.00 42.76 4.79
61 62 4.814294 GGCTAGGCACACCGGTCG 62.814 72.222 2.59 2.80 42.76 4.79
62 63 3.755628 GCTAGGCACACCGGTCGA 61.756 66.667 2.59 0.00 42.76 4.20
63 64 2.181021 CTAGGCACACCGGTCGAC 59.819 66.667 2.59 7.13 42.76 4.20
64 65 2.598099 TAGGCACACCGGTCGACA 60.598 61.111 18.91 0.00 42.76 4.35
65 66 2.543687 CTAGGCACACCGGTCGACAG 62.544 65.000 18.91 13.87 42.76 3.51
66 67 4.295119 GGCACACCGGTCGACAGT 62.295 66.667 18.91 11.34 0.00 3.55
67 68 2.733593 GCACACCGGTCGACAGTC 60.734 66.667 18.91 0.00 0.00 3.51
68 69 2.049433 CACACCGGTCGACAGTCC 60.049 66.667 18.91 0.00 0.00 3.85
69 70 3.667282 ACACCGGTCGACAGTCCG 61.667 66.667 18.91 11.66 46.13 4.79
74 75 3.771160 GGTCGACAGTCCGCCCAT 61.771 66.667 18.91 0.00 0.00 4.00
75 76 2.264794 GTCGACAGTCCGCCCATT 59.735 61.111 11.55 0.00 0.00 3.16
76 77 2.100631 GTCGACAGTCCGCCCATTG 61.101 63.158 11.55 0.00 0.00 2.82
77 78 2.819595 CGACAGTCCGCCCATTGG 60.820 66.667 0.00 0.00 0.00 3.16
78 79 2.351276 GACAGTCCGCCCATTGGT 59.649 61.111 1.20 0.00 0.00 3.67
79 80 1.600107 GACAGTCCGCCCATTGGTA 59.400 57.895 1.20 0.00 0.00 3.25
80 81 0.462047 GACAGTCCGCCCATTGGTAG 60.462 60.000 1.20 0.00 0.00 3.18
81 82 0.907704 ACAGTCCGCCCATTGGTAGA 60.908 55.000 1.20 0.00 0.00 2.59
82 83 0.462047 CAGTCCGCCCATTGGTAGAC 60.462 60.000 1.20 5.53 36.56 2.59
83 84 0.617820 AGTCCGCCCATTGGTAGACT 60.618 55.000 11.67 11.67 39.72 3.24
84 85 0.252197 GTCCGCCCATTGGTAGACTT 59.748 55.000 1.20 0.00 34.67 3.01
85 86 0.988832 TCCGCCCATTGGTAGACTTT 59.011 50.000 1.20 0.00 0.00 2.66
86 87 1.353022 TCCGCCCATTGGTAGACTTTT 59.647 47.619 1.20 0.00 0.00 2.27
87 88 1.743394 CCGCCCATTGGTAGACTTTTC 59.257 52.381 1.20 0.00 0.00 2.29
88 89 2.432444 CGCCCATTGGTAGACTTTTCA 58.568 47.619 1.20 0.00 0.00 2.69
89 90 2.817258 CGCCCATTGGTAGACTTTTCAA 59.183 45.455 1.20 0.00 0.00 2.69
90 91 3.443681 CGCCCATTGGTAGACTTTTCAAT 59.556 43.478 1.20 0.00 0.00 2.57
91 92 4.675146 CGCCCATTGGTAGACTTTTCAATG 60.675 45.833 1.20 13.57 43.37 2.82
94 95 4.747810 CATTGGTAGACTTTTCAATGGCC 58.252 43.478 0.00 0.00 41.35 5.36
95 96 2.802719 TGGTAGACTTTTCAATGGCCC 58.197 47.619 0.00 0.00 0.00 5.80
96 97 2.100197 GGTAGACTTTTCAATGGCCCC 58.900 52.381 0.00 0.00 0.00 5.80
97 98 2.100197 GTAGACTTTTCAATGGCCCCC 58.900 52.381 0.00 0.00 0.00 5.40
98 99 0.786435 AGACTTTTCAATGGCCCCCT 59.214 50.000 0.00 0.00 0.00 4.79
99 100 1.186200 GACTTTTCAATGGCCCCCTC 58.814 55.000 0.00 0.00 0.00 4.30
100 101 0.611896 ACTTTTCAATGGCCCCCTCG 60.612 55.000 0.00 0.00 0.00 4.63
101 102 0.323360 CTTTTCAATGGCCCCCTCGA 60.323 55.000 0.00 0.00 0.00 4.04
102 103 0.610785 TTTTCAATGGCCCCCTCGAC 60.611 55.000 0.00 0.00 0.00 4.20
103 104 2.493273 TTTCAATGGCCCCCTCGACC 62.493 60.000 0.00 0.00 0.00 4.79
104 105 3.727258 CAATGGCCCCCTCGACCA 61.727 66.667 0.00 0.00 37.99 4.02
105 106 2.938798 AATGGCCCCCTCGACCAA 60.939 61.111 0.00 0.00 36.94 3.67
106 107 3.282374 AATGGCCCCCTCGACCAAC 62.282 63.158 0.00 0.00 36.94 3.77
109 110 3.961414 GCCCCCTCGACCAACCAA 61.961 66.667 0.00 0.00 0.00 3.67
110 111 2.840576 CCCCCTCGACCAACCAAA 59.159 61.111 0.00 0.00 0.00 3.28
111 112 1.602605 CCCCCTCGACCAACCAAAC 60.603 63.158 0.00 0.00 0.00 2.93
112 113 1.454539 CCCCTCGACCAACCAAACT 59.545 57.895 0.00 0.00 0.00 2.66
113 114 0.605589 CCCCTCGACCAACCAAACTC 60.606 60.000 0.00 0.00 0.00 3.01
114 115 0.605589 CCCTCGACCAACCAAACTCC 60.606 60.000 0.00 0.00 0.00 3.85
115 116 0.605589 CCTCGACCAACCAAACTCCC 60.606 60.000 0.00 0.00 0.00 4.30
116 117 0.605589 CTCGACCAACCAAACTCCCC 60.606 60.000 0.00 0.00 0.00 4.81
117 118 1.602605 CGACCAACCAAACTCCCCC 60.603 63.158 0.00 0.00 0.00 5.40
118 119 1.851267 GACCAACCAAACTCCCCCT 59.149 57.895 0.00 0.00 0.00 4.79
119 120 0.251209 GACCAACCAAACTCCCCCTC 60.251 60.000 0.00 0.00 0.00 4.30
120 121 1.076727 CCAACCAAACTCCCCCTCC 59.923 63.158 0.00 0.00 0.00 4.30
121 122 1.725169 CCAACCAAACTCCCCCTCCA 61.725 60.000 0.00 0.00 0.00 3.86
122 123 0.251341 CAACCAAACTCCCCCTCCAG 60.251 60.000 0.00 0.00 0.00 3.86
123 124 1.435346 AACCAAACTCCCCCTCCAGG 61.435 60.000 0.00 0.00 0.00 4.45
124 125 1.541368 CCAAACTCCCCCTCCAGGA 60.541 63.158 0.00 0.00 38.24 3.86
125 126 1.140134 CCAAACTCCCCCTCCAGGAA 61.140 60.000 0.00 0.00 38.24 3.36
126 127 1.002857 CAAACTCCCCCTCCAGGAAT 58.997 55.000 0.00 0.00 38.24 3.01
127 128 1.064389 CAAACTCCCCCTCCAGGAATC 60.064 57.143 0.00 0.00 38.24 2.52
128 129 0.121197 AACTCCCCCTCCAGGAATCA 59.879 55.000 0.00 0.00 38.24 2.57
129 130 0.327000 ACTCCCCCTCCAGGAATCAG 60.327 60.000 0.00 0.00 38.24 2.90
130 131 0.030705 CTCCCCCTCCAGGAATCAGA 60.031 60.000 0.00 0.00 38.24 3.27
131 132 0.649992 TCCCCCTCCAGGAATCAGAT 59.350 55.000 0.00 0.00 38.24 2.90
132 133 1.063183 CCCCCTCCAGGAATCAGATC 58.937 60.000 0.00 0.00 38.24 2.75
133 134 0.683973 CCCCTCCAGGAATCAGATCG 59.316 60.000 0.00 0.00 38.24 3.69
134 135 1.709578 CCCTCCAGGAATCAGATCGA 58.290 55.000 0.00 0.00 38.24 3.59
135 136 1.617850 CCCTCCAGGAATCAGATCGAG 59.382 57.143 0.00 0.00 38.24 4.04
136 137 2.591923 CCTCCAGGAATCAGATCGAGA 58.408 52.381 0.00 0.00 37.39 4.04
137 138 2.295909 CCTCCAGGAATCAGATCGAGAC 59.704 54.545 0.00 0.00 37.39 3.36
138 139 1.950216 TCCAGGAATCAGATCGAGACG 59.050 52.381 0.00 0.00 0.00 4.18
139 140 1.678627 CCAGGAATCAGATCGAGACGT 59.321 52.381 0.00 0.00 0.00 4.34
140 141 2.099921 CCAGGAATCAGATCGAGACGTT 59.900 50.000 0.00 0.00 0.00 3.99
141 142 3.367607 CAGGAATCAGATCGAGACGTTC 58.632 50.000 0.00 0.00 0.00 3.95
142 143 3.017442 AGGAATCAGATCGAGACGTTCA 58.983 45.455 0.00 0.00 0.00 3.18
143 144 3.109619 GGAATCAGATCGAGACGTTCAC 58.890 50.000 0.00 0.00 0.00 3.18
144 145 2.460243 ATCAGATCGAGACGTTCACG 57.540 50.000 0.00 0.00 46.33 4.35
154 155 2.279851 CGTTCACGTGCCAGGTGA 60.280 61.111 15.70 15.70 40.72 4.02
155 156 2.594962 CGTTCACGTGCCAGGTGAC 61.595 63.158 18.97 13.04 41.94 3.67
156 157 2.110213 TTCACGTGCCAGGTGACC 59.890 61.111 18.97 0.00 41.94 4.02
157 158 3.800685 TTCACGTGCCAGGTGACCG 62.801 63.158 18.97 0.00 41.94 4.79
158 159 4.602259 CACGTGCCAGGTGACCGT 62.602 66.667 11.98 0.00 36.17 4.83
159 160 4.602259 ACGTGCCAGGTGACCGTG 62.602 66.667 0.00 0.00 0.00 4.94
160 161 4.293648 CGTGCCAGGTGACCGTGA 62.294 66.667 0.00 0.00 0.00 4.35
161 162 2.665185 GTGCCAGGTGACCGTGAC 60.665 66.667 0.00 0.00 0.00 3.67
162 163 2.842462 TGCCAGGTGACCGTGACT 60.842 61.111 0.00 0.00 0.00 3.41
163 164 2.048127 GCCAGGTGACCGTGACTC 60.048 66.667 0.00 0.00 0.00 3.36
164 165 2.867855 GCCAGGTGACCGTGACTCA 61.868 63.158 0.00 0.00 0.00 3.41
165 166 1.290324 CCAGGTGACCGTGACTCAG 59.710 63.158 0.00 0.00 0.00 3.35
166 167 1.373497 CAGGTGACCGTGACTCAGC 60.373 63.158 0.00 0.00 36.57 4.26
167 168 1.832608 AGGTGACCGTGACTCAGCA 60.833 57.895 6.77 0.00 38.39 4.41
168 169 1.188219 AGGTGACCGTGACTCAGCAT 61.188 55.000 6.77 0.00 38.39 3.79
169 170 0.737715 GGTGACCGTGACTCAGCATC 60.738 60.000 0.00 0.00 36.38 3.91
170 171 0.038251 GTGACCGTGACTCAGCATCA 60.038 55.000 0.00 0.00 0.00 3.07
171 172 0.897621 TGACCGTGACTCAGCATCAT 59.102 50.000 0.00 0.00 0.00 2.45
172 173 1.276138 TGACCGTGACTCAGCATCATT 59.724 47.619 0.00 0.00 0.00 2.57
173 174 2.289631 TGACCGTGACTCAGCATCATTT 60.290 45.455 0.00 0.00 0.00 2.32
174 175 2.079158 ACCGTGACTCAGCATCATTTG 58.921 47.619 0.00 0.00 0.00 2.32
175 176 2.079158 CCGTGACTCAGCATCATTTGT 58.921 47.619 0.00 0.00 0.00 2.83
176 177 2.485426 CCGTGACTCAGCATCATTTGTT 59.515 45.455 0.00 0.00 0.00 2.83
177 178 3.485633 CGTGACTCAGCATCATTTGTTG 58.514 45.455 0.00 0.00 37.86 3.33
178 179 3.058708 CGTGACTCAGCATCATTTGTTGT 60.059 43.478 0.00 0.00 37.75 3.32
179 180 4.152223 CGTGACTCAGCATCATTTGTTGTA 59.848 41.667 0.00 0.00 37.75 2.41
180 181 5.385617 GTGACTCAGCATCATTTGTTGTAC 58.614 41.667 0.00 0.00 37.75 2.90
181 182 5.180117 GTGACTCAGCATCATTTGTTGTACT 59.820 40.000 0.00 0.00 37.75 2.73
182 183 5.179929 TGACTCAGCATCATTTGTTGTACTG 59.820 40.000 0.00 0.00 37.75 2.74
183 184 4.083110 ACTCAGCATCATTTGTTGTACTGC 60.083 41.667 0.00 0.00 37.75 4.40
184 185 4.074259 TCAGCATCATTTGTTGTACTGCT 58.926 39.130 0.00 0.00 37.75 4.24
185 186 5.244755 TCAGCATCATTTGTTGTACTGCTA 58.755 37.500 0.79 0.00 37.75 3.49
186 187 5.122239 TCAGCATCATTTGTTGTACTGCTAC 59.878 40.000 0.79 0.00 37.75 3.58
187 188 5.003160 AGCATCATTTGTTGTACTGCTACA 58.997 37.500 0.00 0.00 36.01 2.74
188 189 5.088739 GCATCATTTGTTGTACTGCTACAC 58.911 41.667 0.00 0.00 32.28 2.90
189 190 4.983215 TCATTTGTTGTACTGCTACACG 57.017 40.909 0.00 0.00 32.28 4.49
190 191 4.623002 TCATTTGTTGTACTGCTACACGA 58.377 39.130 0.00 0.00 32.28 4.35
191 192 4.684242 TCATTTGTTGTACTGCTACACGAG 59.316 41.667 0.00 0.00 32.28 4.18
219 220 9.793252 GGGACGTACATATATATACGAAAACAT 57.207 33.333 25.91 6.24 45.51 2.71
226 227 8.717821 ACATATATATACGAAAACATGTGTGGC 58.282 33.333 0.00 0.00 0.00 5.01
227 228 8.935844 CATATATATACGAAAACATGTGTGGCT 58.064 33.333 0.00 0.00 0.00 4.75
228 229 5.734855 ATATACGAAAACATGTGTGGCTC 57.265 39.130 0.00 0.00 0.00 4.70
229 230 1.967319 ACGAAAACATGTGTGGCTCT 58.033 45.000 0.00 0.00 0.00 4.09
230 231 3.120321 ACGAAAACATGTGTGGCTCTA 57.880 42.857 0.00 0.00 0.00 2.43
231 232 3.067106 ACGAAAACATGTGTGGCTCTAG 58.933 45.455 0.00 0.00 0.00 2.43
232 233 2.416547 CGAAAACATGTGTGGCTCTAGG 59.583 50.000 0.00 0.00 0.00 3.02
233 234 1.826385 AAACATGTGTGGCTCTAGGC 58.174 50.000 0.00 0.00 41.50 3.93
234 235 0.987294 AACATGTGTGGCTCTAGGCT 59.013 50.000 0.00 0.00 41.69 4.58
235 236 0.987294 ACATGTGTGGCTCTAGGCTT 59.013 50.000 0.00 0.00 41.69 4.35
236 237 1.352352 ACATGTGTGGCTCTAGGCTTT 59.648 47.619 0.00 0.00 41.69 3.51
255 256 2.788515 CAGGGACAAACCGTGTGTT 58.211 52.632 0.00 0.00 45.95 3.32
256 257 0.380378 CAGGGACAAACCGTGTGTTG 59.620 55.000 0.00 0.00 45.95 3.33
257 258 0.750182 AGGGACAAACCGTGTGTTGG 60.750 55.000 0.00 0.00 41.96 3.77
258 259 1.730451 GGGACAAACCGTGTGTTGGG 61.730 60.000 0.00 0.00 41.96 4.12
261 262 0.322636 ACAAACCGTGTGTTGGGTGA 60.323 50.000 0.00 0.00 39.72 4.02
304 312 3.031013 TCTCCATCACGACCATACACAT 58.969 45.455 0.00 0.00 0.00 3.21
341 349 0.461693 GCGCTCAGAGCAAGAGGAAT 60.462 55.000 22.49 0.00 42.58 3.01
347 355 1.753649 CAGAGCAAGAGGAATCCGAGA 59.246 52.381 0.00 0.00 0.00 4.04
350 358 2.933260 GAGCAAGAGGAATCCGAGAAAC 59.067 50.000 0.00 0.00 0.00 2.78
357 370 1.933853 GGAATCCGAGAAACATGACGG 59.066 52.381 0.00 6.70 45.61 4.79
390 403 7.279313 TGCTCGTAAAAATACCAGAAGAATACC 59.721 37.037 0.00 0.00 0.00 2.73
392 405 9.379791 CTCGTAAAAATACCAGAAGAATACCTT 57.620 33.333 0.00 0.00 37.93 3.50
423 436 4.469625 CGTATGCATACTCAGACGTACT 57.530 45.455 29.20 0.00 43.95 2.73
424 437 4.212150 CGTATGCATACTCAGACGTACTG 58.788 47.826 29.20 9.75 43.95 2.74
425 438 3.717400 ATGCATACTCAGACGTACTGG 57.283 47.619 0.00 7.92 45.76 4.00
426 439 1.134367 TGCATACTCAGACGTACTGGC 59.866 52.381 12.89 9.37 45.76 4.85
427 440 1.405821 GCATACTCAGACGTACTGGCT 59.594 52.381 12.89 0.00 45.76 4.75
428 441 2.617308 GCATACTCAGACGTACTGGCTA 59.383 50.000 12.89 5.59 45.76 3.93
430 443 4.790123 GCATACTCAGACGTACTGGCTAAG 60.790 50.000 12.89 7.24 45.76 2.18
434 642 2.496070 TCAGACGTACTGGCTAAGCAAT 59.504 45.455 12.89 0.00 45.76 3.56
441 649 0.097674 CTGGCTAAGCAATGCACGAC 59.902 55.000 8.35 0.00 0.00 4.34
448 656 3.389687 AAGCAATGCACGACGAATTAG 57.610 42.857 8.35 0.00 0.00 1.73
455 663 5.637104 ATGCACGACGAATTAGTTGATAC 57.363 39.130 12.40 2.77 0.00 2.24
456 664 4.740268 TGCACGACGAATTAGTTGATACT 58.260 39.130 12.40 0.00 38.44 2.12
457 665 5.882553 TGCACGACGAATTAGTTGATACTA 58.117 37.500 12.40 0.00 35.78 1.82
458 666 5.740569 TGCACGACGAATTAGTTGATACTAC 59.259 40.000 12.40 0.00 36.61 2.73
459 667 5.970023 GCACGACGAATTAGTTGATACTACT 59.030 40.000 12.40 0.00 36.61 2.57
460 668 7.128331 GCACGACGAATTAGTTGATACTACTA 58.872 38.462 12.40 0.00 36.61 1.82
461 669 7.111317 GCACGACGAATTAGTTGATACTACTAC 59.889 40.741 12.40 0.00 36.61 2.73
462 670 8.118607 CACGACGAATTAGTTGATACTACTACA 58.881 37.037 12.40 0.00 36.61 2.74
463 671 8.119226 ACGACGAATTAGTTGATACTACTACAC 58.881 37.037 12.40 0.00 36.61 2.90
464 672 8.333908 CGACGAATTAGTTGATACTACTACACT 58.666 37.037 0.00 0.00 36.61 3.55
479 687 8.868635 ACTACTACACTAACAGTTTCAAACTC 57.131 34.615 0.00 0.00 40.46 3.01
485 693 7.736893 ACACTAACAGTTTCAAACTCTCCTAT 58.263 34.615 0.00 0.00 40.46 2.57
486 694 7.657761 ACACTAACAGTTTCAAACTCTCCTATG 59.342 37.037 0.00 0.00 40.46 2.23
490 698 6.784031 ACAGTTTCAAACTCTCCTATGGAAT 58.216 36.000 0.00 0.00 40.46 3.01
492 700 8.043710 ACAGTTTCAAACTCTCCTATGGAATAG 58.956 37.037 0.00 0.00 42.49 1.73
495 703 9.232473 GTTTCAAACTCTCCTATGGAATAGTTT 57.768 33.333 15.30 15.30 45.54 2.66
496 704 9.449719 TTTCAAACTCTCCTATGGAATAGTTTC 57.550 33.333 16.96 0.00 45.54 2.78
498 706 8.772250 TCAAACTCTCCTATGGAATAGTTTCAT 58.228 33.333 16.96 0.00 45.54 2.57
502 710 6.299141 TCTCCTATGGAATAGTTTCATTGCC 58.701 40.000 0.00 0.00 45.54 4.52
504 712 4.216257 CCTATGGAATAGTTTCATTGCCGG 59.784 45.833 0.00 0.00 45.54 6.13
506 714 3.691575 TGGAATAGTTTCATTGCCGGAA 58.308 40.909 5.05 0.00 33.23 4.30
507 715 4.082845 TGGAATAGTTTCATTGCCGGAAA 58.917 39.130 5.05 0.00 33.23 3.13
526 782 2.543777 ACTTGCCAAGCGAAGAAGTA 57.456 45.000 3.88 0.00 0.00 2.24
534 790 5.163405 TGCCAAGCGAAGAAGTAGATATTCT 60.163 40.000 0.00 0.00 38.65 2.40
546 802 6.915544 AGTAGATATTCTGCATGTGTGTTG 57.084 37.500 0.00 0.00 31.12 3.33
550 806 5.882000 AGATATTCTGCATGTGTGTTGCTTA 59.118 36.000 0.00 0.00 40.77 3.09
551 807 6.544931 AGATATTCTGCATGTGTGTTGCTTAT 59.455 34.615 0.00 0.00 40.77 1.73
557 813 6.375174 TCTGCATGTGTGTTGCTTATAGATTT 59.625 34.615 0.00 0.00 40.77 2.17
561 819 7.669098 CATGTGTGTTGCTTATAGATTTTTGC 58.331 34.615 0.00 0.00 0.00 3.68
562 820 6.980593 TGTGTGTTGCTTATAGATTTTTGCT 58.019 32.000 0.00 0.00 0.00 3.91
569 827 9.626045 GTTGCTTATAGATTTTTGCTGTTAGTT 57.374 29.630 0.00 0.00 0.00 2.24
582 840 5.171476 TGCTGTTAGTTAGCTCTGCTTTAG 58.829 41.667 0.00 0.00 41.66 1.85
583 841 4.033472 GCTGTTAGTTAGCTCTGCTTTAGC 59.967 45.833 0.00 0.00 40.44 3.09
587 845 4.293662 AGTTAGCTCTGCTTTAGCCTTT 57.706 40.909 0.00 0.00 41.02 3.11
596 854 3.896122 TGCTTTAGCCTTTTTAGTTGCG 58.104 40.909 0.00 0.00 41.18 4.85
597 855 2.661675 GCTTTAGCCTTTTTAGTTGCGC 59.338 45.455 0.00 0.00 34.31 6.09
598 856 3.855524 GCTTTAGCCTTTTTAGTTGCGCA 60.856 43.478 5.66 5.66 34.31 6.09
600 858 2.352503 AGCCTTTTTAGTTGCGCATG 57.647 45.000 12.75 0.00 0.00 4.06
601 859 1.613437 AGCCTTTTTAGTTGCGCATGT 59.387 42.857 12.75 3.63 0.00 3.21
605 863 3.801594 CCTTTTTAGTTGCGCATGTTTGT 59.198 39.130 12.75 0.00 0.00 2.83
615 873 1.598701 GCATGTTTGTCCTCTGGCCC 61.599 60.000 0.00 0.00 0.00 5.80
626 884 3.087343 TCTGGCCCTGACAGATTCA 57.913 52.632 3.32 0.00 43.49 2.57
651 909 5.754890 GTGAACTTGTTGGCTTCATTTTCAT 59.245 36.000 0.00 0.00 0.00 2.57
654 912 5.058490 ACTTGTTGGCTTCATTTTCATTGG 58.942 37.500 0.00 0.00 0.00 3.16
661 919 3.306019 GCTTCATTTTCATTGGAACCGGT 60.306 43.478 0.00 0.00 31.35 5.28
672 930 4.974438 AACCGGTGAGGCCCTCCA 62.974 66.667 8.52 0.00 46.52 3.86
685 943 3.850173 AGGCCCTCCATGTTACTCTAAAA 59.150 43.478 0.00 0.00 33.74 1.52
706 966 2.953821 CACGGTTGGTGGATGCAC 59.046 61.111 9.16 9.16 43.16 4.57
715 975 1.663388 GTGGATGCACGACGTGACA 60.663 57.895 31.08 25.50 35.23 3.58
780 1180 2.110757 TTGCACATGACTCGCCTGGA 62.111 55.000 0.00 0.00 0.00 3.86
791 1191 2.644212 CGCCTGGAGCAGACAGTCT 61.644 63.158 0.00 0.00 44.04 3.24
821 1244 0.465705 GGAGAATGGATCCACGCAGA 59.534 55.000 18.99 0.00 36.79 4.26
823 1246 0.179062 AGAATGGATCCACGCAGAGC 60.179 55.000 18.99 1.46 0.00 4.09
824 1247 0.462581 GAATGGATCCACGCAGAGCA 60.463 55.000 18.99 0.00 0.00 4.26
834 1278 1.153667 CGCAGAGCAACCTCTCCTC 60.154 63.158 0.00 0.00 45.21 3.71
856 1300 6.056997 TCTCCTCTCCCCTTCCTATAAATT 57.943 41.667 0.00 0.00 0.00 1.82
910 1363 0.896940 CCATCCAAAGGCACAGCAGT 60.897 55.000 0.00 0.00 0.00 4.40
915 1368 0.520404 CAAAGGCACAGCAGTAGCAG 59.480 55.000 6.15 0.00 45.49 4.24
933 1386 4.387598 AGCAGCTTGTTCATCTCATATCC 58.612 43.478 0.00 0.00 0.00 2.59
969 1443 8.526978 AGTTACCAAGTTAACTAGCCTACTTAC 58.473 37.037 8.92 0.00 35.03 2.34
1022 1503 4.463891 CCAGCCACCATTAATTCAGAAACT 59.536 41.667 0.00 0.00 0.00 2.66
1027 1508 6.567050 CCACCATTAATTCAGAAACTGATGG 58.433 40.000 13.80 13.80 40.39 3.51
1028 1509 6.038356 CACCATTAATTCAGAAACTGATGGC 58.962 40.000 14.73 0.00 40.39 4.40
1029 1510 5.954150 ACCATTAATTCAGAAACTGATGGCT 59.046 36.000 14.73 4.99 40.39 4.75
1056 1537 0.731417 CGCATGCCTTCTTCTCCTTG 59.269 55.000 13.15 0.00 0.00 3.61
1088 1605 2.040544 CGGTGCTCCATTCGGCTTT 61.041 57.895 5.52 0.00 0.00 3.51
1101 1618 1.818363 GGCTTTACCGGTAGCTGGC 60.818 63.158 24.80 20.42 37.54 4.85
1281 2500 4.792513 TTTTTAGTTACACCAGGGGTCA 57.207 40.909 0.00 0.00 31.02 4.02
1406 2636 6.491403 ACTTGGTCGTAGGAGAAACTAGTTAA 59.509 38.462 8.92 0.00 0.00 2.01
1436 2666 5.118817 CAGTCTTGCTAAGTTTTAGTCGTCC 59.881 44.000 0.00 0.00 0.00 4.79
1441 2671 3.850837 GCTAAGTTTTAGTCGTCCGAGAC 59.149 47.826 0.00 0.00 41.23 3.36
1550 2781 8.899427 ACATGGTATCTCACTTGATAAGATTG 57.101 34.615 0.00 0.00 32.25 2.67
1570 2801 8.729805 AGATTGGATTAAATCTCAGTTGACTC 57.270 34.615 0.00 0.00 42.01 3.36
1625 2856 0.681243 CTTGAACCTTGGCTAGCCCC 60.681 60.000 30.81 12.82 34.56 5.80
1648 2879 5.132816 CCTCCACCTCATTTTCTATACCCTT 59.867 44.000 0.00 0.00 0.00 3.95
1684 2915 2.497675 TCAAGGATGCTGTGTCTACTCC 59.502 50.000 0.00 0.00 0.00 3.85
1692 2923 0.877071 TGTGTCTACTCCGAACGGAC 59.123 55.000 12.04 3.68 39.76 4.79
1709 2940 5.866335 ACGGACGAGATATAGAAGATGTC 57.134 43.478 0.00 0.00 0.00 3.06
1785 3016 5.528690 TGTCTTTTGAATGAGGACAGTTCTG 59.471 40.000 0.00 0.00 33.74 3.02
2011 3385 2.271800 CGAGGCTTATTGACCACTGTC 58.728 52.381 0.00 0.00 42.12 3.51
2111 3485 1.278985 TCCATGGTGACGATCTGCTTT 59.721 47.619 12.58 0.00 0.00 3.51
2199 3573 4.136796 ACAAGCTTAGCATGTCAAGACAA 58.863 39.130 9.40 0.00 45.41 3.18
2248 3625 9.371136 CTTGAGTGCAGTAATAGTCTATGAAAA 57.629 33.333 0.00 0.00 0.00 2.29
2249 3626 9.890629 TTGAGTGCAGTAATAGTCTATGAAAAT 57.109 29.630 0.00 0.00 0.00 1.82
2690 4080 1.547820 TCTGAGCTACCTGCAGAACTG 59.452 52.381 17.39 0.00 45.94 3.16
2780 4170 2.503356 ACAGGGAGATGCAAGAGGTTAG 59.497 50.000 0.00 0.00 0.00 2.34
2855 4258 3.382546 AGCAAATATGTCCACCATCTTGC 59.617 43.478 11.28 11.28 44.81 4.01
2882 4292 4.448210 AGAAAAACGCTAGAACTGTTGGA 58.552 39.130 0.00 0.00 0.00 3.53
4096 5599 1.322538 AATGGCGAGGAAACCATGGC 61.323 55.000 13.04 0.00 46.04 4.40
4569 6152 1.273267 TGTCCTAGTGGGTGCTCATCT 60.273 52.381 0.00 0.00 36.25 2.90
4704 6288 1.884464 CTCGTGGTGATGCCGATGG 60.884 63.158 0.00 0.00 41.21 3.51
4762 6346 3.067106 TCTGAACAACGAATGCTTCTCC 58.933 45.455 0.00 0.00 0.00 3.71
4773 6357 0.984230 TGCTTCTCCGGGATGAAGTT 59.016 50.000 24.39 0.00 41.05 2.66
5009 6612 5.950883 ACATTCTGCATCATTAGCATATGC 58.049 37.500 20.36 20.36 44.94 3.14
5056 6660 2.870411 ACCCGAAGAAAAGTTCTGAACG 59.130 45.455 14.35 0.83 40.59 3.95
5062 6666 1.947456 GAAAAGTTCTGAACGGCCTGT 59.053 47.619 14.35 0.00 36.23 4.00
5096 6700 3.188460 GTGTTGCGGTGTGTGATAAGATT 59.812 43.478 0.00 0.00 0.00 2.40
5126 6730 2.900547 ATTCAAGGGAATTGGGCCG 58.099 52.632 0.00 0.00 40.87 6.13
5195 6832 2.092968 GGATGGTGCAATAGGTGACTCA 60.093 50.000 0.00 0.00 43.67 3.41
5205 6842 8.082242 GTGCAATAGGTGACTCAAATTTAGTTT 58.918 33.333 0.00 0.00 43.67 2.66
5208 6845 9.831737 CAATAGGTGACTCAAATTTAGTTTCAG 57.168 33.333 0.00 0.00 43.67 3.02
5213 6850 7.115378 GGTGACTCAAATTTAGTTTCAGCAATG 59.885 37.037 12.18 0.00 0.00 2.82
5215 6852 5.630680 ACTCAAATTTAGTTTCAGCAATGCG 59.369 36.000 0.00 0.00 0.00 4.73
5218 6855 7.312154 TCAAATTTAGTTTCAGCAATGCGTAT 58.688 30.769 0.00 0.00 0.00 3.06
5227 6864 5.651172 TCAGCAATGCGTATTGTACATAC 57.349 39.130 24.22 9.13 44.41 2.39
5231 6868 5.007626 AGCAATGCGTATTGTACATACCAAG 59.992 40.000 24.22 0.00 44.41 3.61
5233 6870 3.199677 TGCGTATTGTACATACCAAGGC 58.800 45.455 0.00 0.00 0.00 4.35
5241 6878 2.917713 ACATACCAAGGCAAATGGGA 57.082 45.000 8.55 0.59 42.48 4.37
5248 6885 3.393941 ACCAAGGCAAATGGGATCAAAAA 59.606 39.130 8.55 0.00 42.48 1.94
5281 6918 3.181483 GCACCAATCTCATAAGGGCAAAG 60.181 47.826 0.00 0.00 0.00 2.77
5286 6924 5.395990 CCAATCTCATAAGGGCAAAGCAAAT 60.396 40.000 0.00 0.00 0.00 2.32
5318 6956 2.306847 GGAAGACCCTCTTTGCAAACA 58.693 47.619 8.05 0.00 36.73 2.83
5341 6979 3.133183 GGGTTTTGCTGTTTCCCACTTTA 59.867 43.478 0.00 0.00 38.15 1.85
5342 6980 4.116961 GGTTTTGCTGTTTCCCACTTTAC 58.883 43.478 0.00 0.00 0.00 2.01
5343 6981 4.382147 GGTTTTGCTGTTTCCCACTTTACA 60.382 41.667 0.00 0.00 0.00 2.41
5344 6982 5.172205 GTTTTGCTGTTTCCCACTTTACAA 58.828 37.500 0.00 0.00 0.00 2.41
5365 7004 0.184451 AGGGGCCATGCATAGACAAG 59.816 55.000 4.39 0.00 0.00 3.16
5376 7015 7.707893 GCCATGCATAGACAAGTGAAATAAAAT 59.292 33.333 0.00 0.00 0.00 1.82
5409 7048 2.582052 CCCACATAACCGGCATACATT 58.418 47.619 0.00 0.00 0.00 2.71
5577 7219 0.685458 GATTGCCCAGCCACCATTCT 60.685 55.000 0.00 0.00 0.00 2.40
5612 7254 2.545810 CTCTCCCTCTCCCTTGTCTTT 58.454 52.381 0.00 0.00 0.00 2.52
5643 7288 3.386237 GGCGACCTCCTCACAGCT 61.386 66.667 0.00 0.00 0.00 4.24
5793 7438 2.108566 CAGGCTCAGATCCGGCAG 59.891 66.667 0.00 0.00 0.00 4.85
5833 7478 1.138859 CTTCAGGACGCCATGGACATA 59.861 52.381 18.40 0.00 0.00 2.29
5853 7498 1.149174 AGCCATGGATAAGGTGCCG 59.851 57.895 18.40 0.00 0.00 5.69
5868 7513 1.258445 TGCCGTCCCCTTCTCTTCTC 61.258 60.000 0.00 0.00 0.00 2.87
5877 7522 2.366916 CCCTTCTCTTCTCTGTGTGTGT 59.633 50.000 0.00 0.00 0.00 3.72
5879 7524 3.181471 CCTTCTCTTCTCTGTGTGTGTGT 60.181 47.826 0.00 0.00 0.00 3.72
5880 7525 3.443099 TCTCTTCTCTGTGTGTGTGTG 57.557 47.619 0.00 0.00 0.00 3.82
5881 7526 1.863454 CTCTTCTCTGTGTGTGTGTGC 59.137 52.381 0.00 0.00 0.00 4.57
5882 7527 0.578683 CTTCTCTGTGTGTGTGTGCG 59.421 55.000 0.00 0.00 0.00 5.34
5883 7528 1.428370 TTCTCTGTGTGTGTGTGCGC 61.428 55.000 0.00 0.00 0.00 6.09
5917 7562 3.505680 TGTTGGATTCGATTTGGAGTTGG 59.494 43.478 0.00 0.00 0.00 3.77
5951 7596 3.392616 TGAAGCTCCTTCTCTTCCTTGTT 59.607 43.478 6.54 0.00 40.73 2.83
5955 7600 3.072944 CTCCTTCTCTTCCTTGTTGCAG 58.927 50.000 0.00 0.00 0.00 4.41
5982 7627 6.835488 AGAACATCTCTCTATCTCTCTTTGCT 59.165 38.462 0.00 0.00 0.00 3.91
6018 7663 3.256960 TGCAACCTCACCCCCTCC 61.257 66.667 0.00 0.00 0.00 4.30
6058 7704 1.739750 CCTAGCCCTCCTTCCATGAT 58.260 55.000 0.00 0.00 0.00 2.45
6059 7705 2.495383 CCCTAGCCCTCCTTCCATGATA 60.495 54.545 0.00 0.00 0.00 2.15
6082 7728 1.853963 AGGAGGTGTAGCACAGGTAG 58.146 55.000 1.61 0.00 35.86 3.18
6092 7738 2.839228 AGCACAGGTAGGAATCCTTCT 58.161 47.619 7.30 2.88 34.61 2.85
6097 7743 5.071115 GCACAGGTAGGAATCCTTCTTCTAT 59.929 44.000 7.30 0.00 34.61 1.98
6126 7772 2.879103 TGTGGTTTTCCTCATCCCTC 57.121 50.000 0.00 0.00 38.37 4.30
6146 7792 7.519057 TCCCTCTCTCTTTATATCTTCTCGAA 58.481 38.462 0.00 0.00 0.00 3.71
6147 7793 8.167392 TCCCTCTCTCTTTATATCTTCTCGAAT 58.833 37.037 0.00 0.00 0.00 3.34
6148 7794 8.458843 CCCTCTCTCTTTATATCTTCTCGAATC 58.541 40.741 0.00 0.00 0.00 2.52
6149 7795 9.231297 CCTCTCTCTTTATATCTTCTCGAATCT 57.769 37.037 0.00 0.00 0.00 2.40
6151 7797 9.008965 TCTCTCTTTATATCTTCTCGAATCTGG 57.991 37.037 0.00 0.00 0.00 3.86
6152 7798 8.926092 TCTCTTTATATCTTCTCGAATCTGGA 57.074 34.615 0.00 0.00 0.00 3.86
6153 7799 8.788806 TCTCTTTATATCTTCTCGAATCTGGAC 58.211 37.037 0.00 0.00 0.00 4.02
6154 7800 8.698973 TCTTTATATCTTCTCGAATCTGGACT 57.301 34.615 0.00 0.00 0.00 3.85
6155 7801 9.794719 TCTTTATATCTTCTCGAATCTGGACTA 57.205 33.333 0.00 0.00 0.00 2.59
6157 7803 9.794719 TTTATATCTTCTCGAATCTGGACTAGA 57.205 33.333 0.00 0.00 40.37 2.43
6158 7804 9.794719 TTATATCTTCTCGAATCTGGACTAGAA 57.205 33.333 0.00 0.00 39.30 2.10
6159 7805 6.633500 ATCTTCTCGAATCTGGACTAGAAG 57.367 41.667 0.00 0.00 40.69 2.85
6160 7806 5.502079 TCTTCTCGAATCTGGACTAGAAGT 58.498 41.667 0.00 0.00 40.38 3.01
6161 7807 6.651086 TCTTCTCGAATCTGGACTAGAAGTA 58.349 40.000 0.00 0.00 40.38 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.233355 CGTAGGATGGCATAAGGGC 57.767 57.895 0.00 0.00 43.73 5.19
15 16 0.240145 TGCACAGAGAACGTCCGTAG 59.760 55.000 0.00 0.00 0.00 3.51
16 17 0.885879 ATGCACAGAGAACGTCCGTA 59.114 50.000 0.00 0.00 0.00 4.02
17 18 0.885879 TATGCACAGAGAACGTCCGT 59.114 50.000 0.00 0.00 0.00 4.69
18 19 1.135373 ACTATGCACAGAGAACGTCCG 60.135 52.381 0.00 0.00 0.00 4.79
19 20 2.656560 ACTATGCACAGAGAACGTCC 57.343 50.000 0.00 0.00 0.00 4.79
20 21 4.106197 CCTAACTATGCACAGAGAACGTC 58.894 47.826 0.00 0.00 0.00 4.34
21 22 3.510360 ACCTAACTATGCACAGAGAACGT 59.490 43.478 0.00 0.00 0.00 3.99
22 23 3.859961 CACCTAACTATGCACAGAGAACG 59.140 47.826 0.00 0.00 0.00 3.95
23 24 4.184629 CCACCTAACTATGCACAGAGAAC 58.815 47.826 0.00 0.00 0.00 3.01
24 25 3.369471 GCCACCTAACTATGCACAGAGAA 60.369 47.826 0.00 0.00 0.00 2.87
25 26 2.168521 GCCACCTAACTATGCACAGAGA 59.831 50.000 0.00 0.00 0.00 3.10
26 27 2.169352 AGCCACCTAACTATGCACAGAG 59.831 50.000 0.00 0.00 0.00 3.35
27 28 2.187958 AGCCACCTAACTATGCACAGA 58.812 47.619 0.00 0.00 0.00 3.41
28 29 2.698855 AGCCACCTAACTATGCACAG 57.301 50.000 0.00 0.00 0.00 3.66
29 30 2.434336 CCTAGCCACCTAACTATGCACA 59.566 50.000 0.00 0.00 0.00 4.57
30 31 2.807108 GCCTAGCCACCTAACTATGCAC 60.807 54.545 0.00 0.00 32.32 4.57
31 32 1.416401 GCCTAGCCACCTAACTATGCA 59.584 52.381 0.00 0.00 32.32 3.96
32 33 1.416401 TGCCTAGCCACCTAACTATGC 59.584 52.381 0.00 0.00 32.57 3.14
33 34 2.434336 TGTGCCTAGCCACCTAACTATG 59.566 50.000 0.69 0.00 34.85 2.23
34 35 2.434702 GTGTGCCTAGCCACCTAACTAT 59.565 50.000 0.69 0.00 34.85 2.12
35 36 1.829222 GTGTGCCTAGCCACCTAACTA 59.171 52.381 0.69 0.00 34.85 2.24
36 37 0.613777 GTGTGCCTAGCCACCTAACT 59.386 55.000 0.69 0.00 34.85 2.24
37 38 0.392595 GGTGTGCCTAGCCACCTAAC 60.393 60.000 15.63 1.80 42.40 2.34
38 39 1.895020 CGGTGTGCCTAGCCACCTAA 61.895 60.000 18.65 0.00 43.00 2.69
39 40 2.355986 CGGTGTGCCTAGCCACCTA 61.356 63.158 18.65 0.00 43.00 3.08
40 41 3.706373 CGGTGTGCCTAGCCACCT 61.706 66.667 18.65 0.00 43.00 4.00
41 42 4.778143 CCGGTGTGCCTAGCCACC 62.778 72.222 13.86 13.86 42.32 4.61
42 43 3.952628 GACCGGTGTGCCTAGCCAC 62.953 68.421 14.63 0.00 36.28 5.01
43 44 3.702048 GACCGGTGTGCCTAGCCA 61.702 66.667 14.63 0.00 0.00 4.75
44 45 4.814294 CGACCGGTGTGCCTAGCC 62.814 72.222 14.63 0.00 0.00 3.93
45 46 3.755628 TCGACCGGTGTGCCTAGC 61.756 66.667 14.63 0.00 0.00 3.42
46 47 2.181021 GTCGACCGGTGTGCCTAG 59.819 66.667 14.63 0.00 0.00 3.02
47 48 2.598099 TGTCGACCGGTGTGCCTA 60.598 61.111 14.63 0.00 0.00 3.93
48 49 3.991051 CTGTCGACCGGTGTGCCT 61.991 66.667 14.63 0.00 0.00 4.75
49 50 4.295119 ACTGTCGACCGGTGTGCC 62.295 66.667 14.63 0.00 0.00 5.01
50 51 2.733593 GACTGTCGACCGGTGTGC 60.734 66.667 14.63 1.10 30.89 4.57
51 52 2.049433 GGACTGTCGACCGGTGTG 60.049 66.667 14.63 3.94 30.89 3.82
52 53 3.667282 CGGACTGTCGACCGGTGT 61.667 66.667 14.63 1.84 43.23 4.16
58 59 2.100631 CAATGGGCGGACTGTCGAC 61.101 63.158 9.11 9.11 37.46 4.20
59 60 2.264480 CAATGGGCGGACTGTCGA 59.736 61.111 1.07 0.00 0.00 4.20
60 61 2.233605 TACCAATGGGCGGACTGTCG 62.234 60.000 3.55 0.00 37.90 4.35
61 62 0.462047 CTACCAATGGGCGGACTGTC 60.462 60.000 3.55 0.00 37.90 3.51
62 63 0.907704 TCTACCAATGGGCGGACTGT 60.908 55.000 3.55 0.00 37.90 3.55
63 64 0.462047 GTCTACCAATGGGCGGACTG 60.462 60.000 3.55 0.00 36.59 3.51
64 65 0.617820 AGTCTACCAATGGGCGGACT 60.618 55.000 14.74 14.74 41.45 3.85
65 66 0.252197 AAGTCTACCAATGGGCGGAC 59.748 55.000 3.55 8.66 38.48 4.79
66 67 0.988832 AAAGTCTACCAATGGGCGGA 59.011 50.000 3.55 0.00 37.90 5.54
67 68 1.743394 GAAAAGTCTACCAATGGGCGG 59.257 52.381 3.55 0.00 37.90 6.13
68 69 2.432444 TGAAAAGTCTACCAATGGGCG 58.568 47.619 3.55 0.00 37.90 6.13
69 70 4.747810 CATTGAAAAGTCTACCAATGGGC 58.252 43.478 3.55 0.00 41.04 5.36
72 73 4.381932 GGGCCATTGAAAAGTCTACCAATG 60.382 45.833 4.39 0.00 43.10 2.82
73 74 3.769300 GGGCCATTGAAAAGTCTACCAAT 59.231 43.478 4.39 0.00 0.00 3.16
74 75 3.161866 GGGCCATTGAAAAGTCTACCAA 58.838 45.455 4.39 0.00 0.00 3.67
75 76 2.556559 GGGGCCATTGAAAAGTCTACCA 60.557 50.000 4.39 0.00 0.00 3.25
76 77 2.100197 GGGGCCATTGAAAAGTCTACC 58.900 52.381 4.39 0.00 0.00 3.18
77 78 2.100197 GGGGGCCATTGAAAAGTCTAC 58.900 52.381 4.39 0.00 0.00 2.59
78 79 2.000048 AGGGGGCCATTGAAAAGTCTA 59.000 47.619 4.39 0.00 0.00 2.59
79 80 0.786435 AGGGGGCCATTGAAAAGTCT 59.214 50.000 4.39 0.00 0.00 3.24
80 81 1.186200 GAGGGGGCCATTGAAAAGTC 58.814 55.000 4.39 0.00 0.00 3.01
81 82 0.611896 CGAGGGGGCCATTGAAAAGT 60.612 55.000 4.39 0.00 0.00 2.66
82 83 0.323360 TCGAGGGGGCCATTGAAAAG 60.323 55.000 4.39 0.00 0.00 2.27
83 84 0.610785 GTCGAGGGGGCCATTGAAAA 60.611 55.000 4.39 0.00 0.00 2.29
84 85 1.001393 GTCGAGGGGGCCATTGAAA 60.001 57.895 4.39 0.00 0.00 2.69
85 86 2.674754 GTCGAGGGGGCCATTGAA 59.325 61.111 4.39 0.00 0.00 2.69
86 87 3.407967 GGTCGAGGGGGCCATTGA 61.408 66.667 4.39 0.00 0.00 2.57
87 88 3.280938 TTGGTCGAGGGGGCCATTG 62.281 63.158 4.39 0.00 31.71 2.82
88 89 2.938798 TTGGTCGAGGGGGCCATT 60.939 61.111 4.39 0.00 31.71 3.16
89 90 3.728373 GTTGGTCGAGGGGGCCAT 61.728 66.667 4.39 0.00 31.71 4.40
92 93 3.501040 TTTGGTTGGTCGAGGGGGC 62.501 63.158 0.00 0.00 0.00 5.80
93 94 1.602605 GTTTGGTTGGTCGAGGGGG 60.603 63.158 0.00 0.00 0.00 5.40
94 95 0.605589 GAGTTTGGTTGGTCGAGGGG 60.606 60.000 0.00 0.00 0.00 4.79
95 96 0.605589 GGAGTTTGGTTGGTCGAGGG 60.606 60.000 0.00 0.00 0.00 4.30
96 97 0.605589 GGGAGTTTGGTTGGTCGAGG 60.606 60.000 0.00 0.00 0.00 4.63
97 98 0.605589 GGGGAGTTTGGTTGGTCGAG 60.606 60.000 0.00 0.00 0.00 4.04
98 99 1.452801 GGGGAGTTTGGTTGGTCGA 59.547 57.895 0.00 0.00 0.00 4.20
99 100 1.602605 GGGGGAGTTTGGTTGGTCG 60.603 63.158 0.00 0.00 0.00 4.79
100 101 0.251209 GAGGGGGAGTTTGGTTGGTC 60.251 60.000 0.00 0.00 0.00 4.02
101 102 1.726192 GGAGGGGGAGTTTGGTTGGT 61.726 60.000 0.00 0.00 0.00 3.67
102 103 1.076727 GGAGGGGGAGTTTGGTTGG 59.923 63.158 0.00 0.00 0.00 3.77
103 104 0.251341 CTGGAGGGGGAGTTTGGTTG 60.251 60.000 0.00 0.00 0.00 3.77
104 105 1.435346 CCTGGAGGGGGAGTTTGGTT 61.435 60.000 0.00 0.00 0.00 3.67
105 106 1.852626 CCTGGAGGGGGAGTTTGGT 60.853 63.158 0.00 0.00 0.00 3.67
106 107 1.140134 TTCCTGGAGGGGGAGTTTGG 61.140 60.000 0.00 0.00 34.06 3.28
107 108 1.002857 ATTCCTGGAGGGGGAGTTTG 58.997 55.000 0.00 0.00 34.06 2.93
108 109 1.299939 GATTCCTGGAGGGGGAGTTT 58.700 55.000 0.00 0.00 34.06 2.66
109 110 0.121197 TGATTCCTGGAGGGGGAGTT 59.879 55.000 0.00 0.00 34.06 3.01
110 111 0.327000 CTGATTCCTGGAGGGGGAGT 60.327 60.000 0.00 0.00 34.06 3.85
111 112 0.030705 TCTGATTCCTGGAGGGGGAG 60.031 60.000 0.00 0.00 34.06 4.30
112 113 0.649992 ATCTGATTCCTGGAGGGGGA 59.350 55.000 0.00 0.00 35.41 4.81
113 114 1.063183 GATCTGATTCCTGGAGGGGG 58.937 60.000 0.00 0.00 35.41 5.40
114 115 0.683973 CGATCTGATTCCTGGAGGGG 59.316 60.000 0.00 0.00 35.41 4.79
115 116 1.617850 CTCGATCTGATTCCTGGAGGG 59.382 57.143 0.00 0.00 35.41 4.30
116 117 2.295909 GTCTCGATCTGATTCCTGGAGG 59.704 54.545 0.00 0.00 0.00 4.30
117 118 2.031245 CGTCTCGATCTGATTCCTGGAG 60.031 54.545 0.00 0.00 0.00 3.86
118 119 1.950216 CGTCTCGATCTGATTCCTGGA 59.050 52.381 0.00 0.00 0.00 3.86
119 120 1.678627 ACGTCTCGATCTGATTCCTGG 59.321 52.381 0.00 0.00 0.00 4.45
120 121 3.181496 TGAACGTCTCGATCTGATTCCTG 60.181 47.826 0.00 0.00 30.24 3.86
121 122 3.017442 TGAACGTCTCGATCTGATTCCT 58.983 45.455 0.00 0.00 30.24 3.36
122 123 3.109619 GTGAACGTCTCGATCTGATTCC 58.890 50.000 0.00 0.00 30.24 3.01
123 124 2.778928 CGTGAACGTCTCGATCTGATTC 59.221 50.000 0.00 0.00 35.64 2.52
124 125 2.786854 CGTGAACGTCTCGATCTGATT 58.213 47.619 0.00 0.00 35.64 2.57
125 126 2.460243 CGTGAACGTCTCGATCTGAT 57.540 50.000 0.00 0.00 35.64 2.90
126 127 3.969795 CGTGAACGTCTCGATCTGA 57.030 52.632 0.00 0.00 35.64 3.27
137 138 2.279851 TCACCTGGCACGTGAACG 60.280 61.111 22.23 5.55 46.33 3.95
138 139 2.251642 GGTCACCTGGCACGTGAAC 61.252 63.158 22.23 17.77 41.70 3.18
139 140 2.110213 GGTCACCTGGCACGTGAA 59.890 61.111 22.23 5.36 41.70 3.18
140 141 4.293648 CGGTCACCTGGCACGTGA 62.294 66.667 22.23 14.14 37.91 4.35
141 142 4.602259 ACGGTCACCTGGCACGTG 62.602 66.667 12.28 12.28 36.32 4.49
142 143 4.602259 CACGGTCACCTGGCACGT 62.602 66.667 0.00 0.00 38.43 4.49
143 144 4.293648 TCACGGTCACCTGGCACG 62.294 66.667 0.00 0.00 0.00 5.34
144 145 2.665185 GTCACGGTCACCTGGCAC 60.665 66.667 0.00 0.00 0.00 5.01
145 146 2.842462 AGTCACGGTCACCTGGCA 60.842 61.111 0.00 0.00 0.00 4.92
146 147 2.048127 GAGTCACGGTCACCTGGC 60.048 66.667 0.00 0.00 0.00 4.85
147 148 1.290324 CTGAGTCACGGTCACCTGG 59.710 63.158 0.00 0.00 0.00 4.45
148 149 1.373497 GCTGAGTCACGGTCACCTG 60.373 63.158 0.00 0.00 0.00 4.00
149 150 1.188219 ATGCTGAGTCACGGTCACCT 61.188 55.000 0.00 0.00 0.00 4.00
150 151 0.737715 GATGCTGAGTCACGGTCACC 60.738 60.000 0.00 0.00 0.00 4.02
151 152 0.038251 TGATGCTGAGTCACGGTCAC 60.038 55.000 0.00 0.00 0.00 3.67
152 153 0.897621 ATGATGCTGAGTCACGGTCA 59.102 50.000 0.00 0.00 0.00 4.02
153 154 2.015736 AATGATGCTGAGTCACGGTC 57.984 50.000 0.00 0.00 0.00 4.79
154 155 2.079158 CAAATGATGCTGAGTCACGGT 58.921 47.619 0.00 0.00 0.00 4.83
155 156 2.079158 ACAAATGATGCTGAGTCACGG 58.921 47.619 0.00 0.00 0.00 4.94
156 157 3.058708 ACAACAAATGATGCTGAGTCACG 60.059 43.478 0.00 0.00 0.00 4.35
157 158 4.494350 ACAACAAATGATGCTGAGTCAC 57.506 40.909 0.00 0.00 0.00 3.67
158 159 5.179929 CAGTACAACAAATGATGCTGAGTCA 59.820 40.000 0.00 0.00 32.01 3.41
159 160 5.625251 CAGTACAACAAATGATGCTGAGTC 58.375 41.667 0.00 0.00 32.01 3.36
160 161 4.083110 GCAGTACAACAAATGATGCTGAGT 60.083 41.667 0.00 0.00 35.30 3.41
161 162 4.155462 AGCAGTACAACAAATGATGCTGAG 59.845 41.667 0.00 0.00 41.66 3.35
162 163 4.074259 AGCAGTACAACAAATGATGCTGA 58.926 39.130 0.00 0.00 41.66 4.26
163 164 4.430137 AGCAGTACAACAAATGATGCTG 57.570 40.909 0.00 0.00 41.66 4.41
164 165 5.003160 TGTAGCAGTACAACAAATGATGCT 58.997 37.500 5.87 5.87 43.74 3.79
165 166 5.088739 GTGTAGCAGTACAACAAATGATGC 58.911 41.667 0.00 0.00 40.94 3.91
166 167 5.120053 TCGTGTAGCAGTACAACAAATGATG 59.880 40.000 0.00 0.00 40.94 3.07
167 168 5.234752 TCGTGTAGCAGTACAACAAATGAT 58.765 37.500 0.00 0.00 40.94 2.45
168 169 4.623002 TCGTGTAGCAGTACAACAAATGA 58.377 39.130 0.00 0.00 40.94 2.57
169 170 4.946255 CTCGTGTAGCAGTACAACAAATG 58.054 43.478 0.00 0.00 40.94 2.32
183 184 1.061570 GTACGTCCCGCTCGTGTAG 59.938 63.158 0.00 0.00 41.62 2.74
184 185 1.026182 ATGTACGTCCCGCTCGTGTA 61.026 55.000 0.00 0.00 41.62 2.90
185 186 1.026182 TATGTACGTCCCGCTCGTGT 61.026 55.000 0.00 0.00 41.62 4.49
186 187 0.309922 ATATGTACGTCCCGCTCGTG 59.690 55.000 0.00 0.00 41.62 4.35
187 188 1.882912 TATATGTACGTCCCGCTCGT 58.117 50.000 0.00 0.00 43.86 4.18
188 189 4.808077 ATATATATGTACGTCCCGCTCG 57.192 45.455 0.00 0.00 0.00 5.03
189 190 5.463392 TCGTATATATATGTACGTCCCGCTC 59.537 44.000 29.50 1.47 44.65 5.03
190 191 5.359756 TCGTATATATATGTACGTCCCGCT 58.640 41.667 29.50 0.00 44.65 5.52
191 192 5.657470 TCGTATATATATGTACGTCCCGC 57.343 43.478 29.50 2.63 44.65 6.13
192 193 7.962373 TGTTTTCGTATATATATGTACGTCCCG 59.038 37.037 29.50 13.29 44.65 5.14
193 194 9.793252 ATGTTTTCGTATATATATGTACGTCCC 57.207 33.333 29.50 20.06 44.65 4.46
200 201 8.717821 GCCACACATGTTTTCGTATATATATGT 58.282 33.333 10.99 0.74 0.00 2.29
201 202 8.935844 AGCCACACATGTTTTCGTATATATATG 58.064 33.333 5.44 5.70 0.00 1.78
202 203 9.151471 GAGCCACACATGTTTTCGTATATATAT 57.849 33.333 0.00 0.00 0.00 0.86
203 204 8.364894 AGAGCCACACATGTTTTCGTATATATA 58.635 33.333 0.00 0.00 0.00 0.86
204 205 7.217200 AGAGCCACACATGTTTTCGTATATAT 58.783 34.615 0.00 0.00 0.00 0.86
205 206 6.578944 AGAGCCACACATGTTTTCGTATATA 58.421 36.000 0.00 0.00 0.00 0.86
206 207 5.428253 AGAGCCACACATGTTTTCGTATAT 58.572 37.500 0.00 0.00 0.00 0.86
207 208 4.827692 AGAGCCACACATGTTTTCGTATA 58.172 39.130 0.00 0.00 0.00 1.47
208 209 3.674997 AGAGCCACACATGTTTTCGTAT 58.325 40.909 0.00 0.00 0.00 3.06
209 210 3.120321 AGAGCCACACATGTTTTCGTA 57.880 42.857 0.00 0.00 0.00 3.43
210 211 1.967319 AGAGCCACACATGTTTTCGT 58.033 45.000 0.00 0.00 0.00 3.85
211 212 2.416547 CCTAGAGCCACACATGTTTTCG 59.583 50.000 0.00 0.00 0.00 3.46
212 213 2.162408 GCCTAGAGCCACACATGTTTTC 59.838 50.000 0.00 0.00 34.35 2.29
213 214 2.162681 GCCTAGAGCCACACATGTTTT 58.837 47.619 0.00 0.00 34.35 2.43
214 215 1.352352 AGCCTAGAGCCACACATGTTT 59.648 47.619 0.00 0.00 45.47 2.83
215 216 0.987294 AGCCTAGAGCCACACATGTT 59.013 50.000 0.00 0.00 45.47 2.71
216 217 0.987294 AAGCCTAGAGCCACACATGT 59.013 50.000 0.00 0.00 45.47 3.21
217 218 2.012673 GAAAGCCTAGAGCCACACATG 58.987 52.381 0.00 0.00 45.47 3.21
218 219 1.630369 TGAAAGCCTAGAGCCACACAT 59.370 47.619 0.00 0.00 45.47 3.21
219 220 1.002430 CTGAAAGCCTAGAGCCACACA 59.998 52.381 0.00 0.00 45.47 3.72
220 221 1.677217 CCTGAAAGCCTAGAGCCACAC 60.677 57.143 0.00 0.00 45.47 3.82
221 222 0.615331 CCTGAAAGCCTAGAGCCACA 59.385 55.000 0.00 0.00 45.47 4.17
222 223 0.107459 CCCTGAAAGCCTAGAGCCAC 60.107 60.000 0.00 0.00 45.47 5.01
223 224 0.252696 TCCCTGAAAGCCTAGAGCCA 60.253 55.000 0.00 0.00 45.47 4.75
224 225 0.179234 GTCCCTGAAAGCCTAGAGCC 59.821 60.000 0.00 0.00 45.47 4.70
225 226 0.905357 TGTCCCTGAAAGCCTAGAGC 59.095 55.000 0.00 0.00 44.25 4.09
226 227 3.339141 GTTTGTCCCTGAAAGCCTAGAG 58.661 50.000 0.00 0.00 0.00 2.43
227 228 2.039879 GGTTTGTCCCTGAAAGCCTAGA 59.960 50.000 0.00 0.00 0.00 2.43
228 229 2.437413 GGTTTGTCCCTGAAAGCCTAG 58.563 52.381 0.00 0.00 0.00 3.02
229 230 1.271163 CGGTTTGTCCCTGAAAGCCTA 60.271 52.381 0.00 0.00 0.00 3.93
230 231 0.537371 CGGTTTGTCCCTGAAAGCCT 60.537 55.000 0.00 0.00 0.00 4.58
231 232 0.822121 ACGGTTTGTCCCTGAAAGCC 60.822 55.000 0.00 0.00 0.00 4.35
232 233 0.310854 CACGGTTTGTCCCTGAAAGC 59.689 55.000 0.00 0.00 0.00 3.51
233 234 1.333619 CACACGGTTTGTCCCTGAAAG 59.666 52.381 0.00 0.00 35.67 2.62
234 235 1.340211 ACACACGGTTTGTCCCTGAAA 60.340 47.619 0.00 0.00 35.67 2.69
235 236 0.253610 ACACACGGTTTGTCCCTGAA 59.746 50.000 0.00 0.00 35.67 3.02
236 237 0.253610 AACACACGGTTTGTCCCTGA 59.746 50.000 0.00 0.00 35.82 3.86
251 252 1.156736 CGACATCCTTCACCCAACAC 58.843 55.000 0.00 0.00 0.00 3.32
252 253 0.605319 GCGACATCCTTCACCCAACA 60.605 55.000 0.00 0.00 0.00 3.33
253 254 1.635663 CGCGACATCCTTCACCCAAC 61.636 60.000 0.00 0.00 0.00 3.77
255 256 1.613317 ATCGCGACATCCTTCACCCA 61.613 55.000 12.93 0.00 0.00 4.51
256 257 0.387929 TATCGCGACATCCTTCACCC 59.612 55.000 12.93 0.00 0.00 4.61
257 258 2.440539 ATATCGCGACATCCTTCACC 57.559 50.000 12.93 0.00 0.00 4.02
258 259 3.555956 ACAAATATCGCGACATCCTTCAC 59.444 43.478 12.93 0.00 0.00 3.18
261 262 4.060038 AGACAAATATCGCGACATCCTT 57.940 40.909 12.93 0.00 0.00 3.36
304 312 1.526785 CGCGTGTACGTACGATGTGTA 60.527 52.381 24.41 0.00 46.46 2.90
347 355 0.951558 GCAACAGGTCCGTCATGTTT 59.048 50.000 5.42 0.00 46.71 2.83
350 358 1.354337 CGAGCAACAGGTCCGTCATG 61.354 60.000 0.00 0.00 0.00 3.07
357 370 4.453136 TGGTATTTTTACGAGCAACAGGTC 59.547 41.667 0.00 0.00 0.00 3.85
393 406 8.388853 CGTCTGAGTATGCATACGTACTATAAT 58.611 37.037 26.86 9.76 46.44 1.28
396 409 5.699915 ACGTCTGAGTATGCATACGTACTAT 59.300 40.000 26.86 11.81 46.44 2.12
399 412 4.206698 ACGTCTGAGTATGCATACGTAC 57.793 45.455 26.86 21.81 45.58 3.67
402 415 4.212150 CAGTACGTCTGAGTATGCATACG 58.788 47.826 26.86 20.52 46.27 3.06
403 416 4.537965 CCAGTACGTCTGAGTATGCATAC 58.462 47.826 26.26 26.26 46.27 2.39
404 417 3.004419 GCCAGTACGTCTGAGTATGCATA 59.996 47.826 1.16 1.16 46.27 3.14
406 419 1.134367 GCCAGTACGTCTGAGTATGCA 59.866 52.381 14.19 0.00 46.27 3.96
408 421 4.790123 GCTTAGCCAGTACGTCTGAGTATG 60.790 50.000 14.19 9.21 46.27 2.39
409 422 3.315749 GCTTAGCCAGTACGTCTGAGTAT 59.684 47.826 14.19 3.11 46.27 2.12
410 423 2.681848 GCTTAGCCAGTACGTCTGAGTA 59.318 50.000 14.19 5.05 46.27 2.59
411 424 1.473278 GCTTAGCCAGTACGTCTGAGT 59.527 52.381 14.19 5.79 46.27 3.41
412 425 1.472878 TGCTTAGCCAGTACGTCTGAG 59.527 52.381 14.19 3.26 46.27 3.35
413 426 1.541379 TGCTTAGCCAGTACGTCTGA 58.459 50.000 14.19 0.00 46.27 3.27
414 427 2.363788 TTGCTTAGCCAGTACGTCTG 57.636 50.000 0.29 0.00 43.27 3.51
416 429 1.327764 GCATTGCTTAGCCAGTACGTC 59.672 52.381 0.29 0.00 0.00 4.34
419 432 1.062587 CGTGCATTGCTTAGCCAGTAC 59.937 52.381 10.49 0.46 0.00 2.73
420 433 1.066502 TCGTGCATTGCTTAGCCAGTA 60.067 47.619 10.49 0.00 0.00 2.74
422 435 0.097674 GTCGTGCATTGCTTAGCCAG 59.902 55.000 10.49 0.00 0.00 4.85
423 436 1.634757 CGTCGTGCATTGCTTAGCCA 61.635 55.000 10.49 0.00 0.00 4.75
424 437 1.060937 CGTCGTGCATTGCTTAGCC 59.939 57.895 10.49 0.00 0.00 3.93
425 438 0.442310 TTCGTCGTGCATTGCTTAGC 59.558 50.000 10.49 0.00 0.00 3.09
426 439 3.389687 AATTCGTCGTGCATTGCTTAG 57.610 42.857 10.49 1.47 0.00 2.18
427 440 3.930229 ACTAATTCGTCGTGCATTGCTTA 59.070 39.130 10.49 0.00 0.00 3.09
428 441 2.742053 ACTAATTCGTCGTGCATTGCTT 59.258 40.909 10.49 0.00 0.00 3.91
430 443 2.806288 ACTAATTCGTCGTGCATTGC 57.194 45.000 0.46 0.46 0.00 3.56
434 642 4.740268 AGTATCAACTAATTCGTCGTGCA 58.260 39.130 0.00 0.00 32.84 4.57
448 656 9.903682 TGAAACTGTTAGTGTAGTAGTATCAAC 57.096 33.333 0.00 0.00 0.00 3.18
455 663 9.182933 GAGAGTTTGAAACTGTTAGTGTAGTAG 57.817 37.037 16.25 0.00 43.03 2.57
456 664 8.139989 GGAGAGTTTGAAACTGTTAGTGTAGTA 58.860 37.037 16.25 0.00 43.03 1.82
457 665 6.985059 GGAGAGTTTGAAACTGTTAGTGTAGT 59.015 38.462 16.25 0.00 43.03 2.73
458 666 7.210873 AGGAGAGTTTGAAACTGTTAGTGTAG 58.789 38.462 16.25 0.00 43.03 2.74
459 667 7.120923 AGGAGAGTTTGAAACTGTTAGTGTA 57.879 36.000 16.25 0.00 43.03 2.90
460 668 5.990668 AGGAGAGTTTGAAACTGTTAGTGT 58.009 37.500 16.25 0.00 43.03 3.55
461 669 7.118390 CCATAGGAGAGTTTGAAACTGTTAGTG 59.882 40.741 16.25 9.00 43.03 2.74
462 670 7.016268 TCCATAGGAGAGTTTGAAACTGTTAGT 59.984 37.037 16.25 3.09 43.03 2.24
463 671 7.386851 TCCATAGGAGAGTTTGAAACTGTTAG 58.613 38.462 16.25 1.60 43.03 2.34
464 672 7.311092 TCCATAGGAGAGTTTGAAACTGTTA 57.689 36.000 16.25 2.27 43.03 2.41
476 684 6.995091 GCAATGAAACTATTCCATAGGAGAGT 59.005 38.462 0.00 0.00 37.18 3.24
477 685 6.429385 GGCAATGAAACTATTCCATAGGAGAG 59.571 42.308 0.00 0.00 37.18 3.20
479 687 5.180117 CGGCAATGAAACTATTCCATAGGAG 59.820 44.000 0.00 0.00 37.18 3.69
485 693 3.358111 TCCGGCAATGAAACTATTCCA 57.642 42.857 0.00 0.00 34.49 3.53
486 694 4.421058 GTTTCCGGCAATGAAACTATTCC 58.579 43.478 14.22 0.00 45.10 3.01
495 703 0.825425 TGGCAAGTTTCCGGCAATGA 60.825 50.000 0.00 0.00 34.36 2.57
496 704 0.033228 TTGGCAAGTTTCCGGCAATG 59.967 50.000 0.00 0.00 42.10 2.82
498 706 1.739049 CTTGGCAAGTTTCCGGCAA 59.261 52.632 19.07 0.00 44.41 4.52
502 710 0.385974 CTTCGCTTGGCAAGTTTCCG 60.386 55.000 26.71 20.82 0.00 4.30
504 712 2.033424 ACTTCTTCGCTTGGCAAGTTTC 59.967 45.455 26.71 10.77 0.00 2.78
506 714 1.680338 ACTTCTTCGCTTGGCAAGTT 58.320 45.000 26.71 0.87 0.00 2.66
507 715 2.037251 TCTACTTCTTCGCTTGGCAAGT 59.963 45.455 26.71 9.12 0.00 3.16
508 716 2.688507 TCTACTTCTTCGCTTGGCAAG 58.311 47.619 22.75 22.75 0.00 4.01
509 717 2.831685 TCTACTTCTTCGCTTGGCAA 57.168 45.000 0.00 0.00 0.00 4.52
510 718 4.672587 ATATCTACTTCTTCGCTTGGCA 57.327 40.909 0.00 0.00 0.00 4.92
526 782 4.267536 AGCAACACACATGCAGAATATCT 58.732 39.130 0.00 0.00 46.22 1.98
534 790 6.513806 AAATCTATAAGCAACACACATGCA 57.486 33.333 0.00 0.00 46.22 3.96
546 802 9.439537 GCTAACTAACAGCAAAAATCTATAAGC 57.560 33.333 0.00 0.00 38.93 3.09
550 806 8.887717 CAGAGCTAACTAACAGCAAAAATCTAT 58.112 33.333 0.00 0.00 41.66 1.98
551 807 7.148407 GCAGAGCTAACTAACAGCAAAAATCTA 60.148 37.037 0.00 0.00 41.66 1.98
557 813 4.008074 AGCAGAGCTAACTAACAGCAAA 57.992 40.909 0.00 0.00 41.66 3.68
561 819 4.568760 GGCTAAAGCAGAGCTAACTAACAG 59.431 45.833 4.07 0.00 44.36 3.16
562 820 4.223032 AGGCTAAAGCAGAGCTAACTAACA 59.777 41.667 4.07 0.00 44.36 2.41
569 827 5.805728 ACTAAAAAGGCTAAAGCAGAGCTA 58.194 37.500 4.07 0.00 44.36 3.32
571 829 5.157067 CAACTAAAAAGGCTAAAGCAGAGC 58.843 41.667 4.07 0.00 44.36 4.09
582 840 2.064573 ACATGCGCAACTAAAAAGGC 57.935 45.000 17.11 0.00 0.00 4.35
583 841 3.801594 ACAAACATGCGCAACTAAAAAGG 59.198 39.130 17.11 0.38 0.00 3.11
587 845 2.621055 AGGACAAACATGCGCAACTAAA 59.379 40.909 17.11 0.00 0.00 1.85
596 854 1.598701 GGGCCAGAGGACAAACATGC 61.599 60.000 4.39 0.00 27.52 4.06
597 855 0.038744 AGGGCCAGAGGACAAACATG 59.961 55.000 6.18 0.00 27.52 3.21
598 856 0.038744 CAGGGCCAGAGGACAAACAT 59.961 55.000 6.18 0.00 27.52 2.71
600 858 0.606673 GTCAGGGCCAGAGGACAAAC 60.607 60.000 6.18 0.00 27.52 2.93
601 859 1.059584 TGTCAGGGCCAGAGGACAAA 61.060 55.000 6.18 0.00 37.33 2.83
605 863 0.252881 AATCTGTCAGGGCCAGAGGA 60.253 55.000 6.18 5.11 41.91 3.71
626 884 5.105392 TGAAAATGAAGCCAACAAGTTCACT 60.105 36.000 0.00 0.00 33.16 3.41
633 891 5.287674 TCCAATGAAAATGAAGCCAACAA 57.712 34.783 0.00 0.00 0.00 2.83
651 909 3.961414 GGGCCTCACCGGTTCCAA 61.961 66.667 2.97 0.00 40.62 3.53
654 912 4.097361 GGAGGGCCTCACCGGTTC 62.097 72.222 33.27 11.74 40.62 3.62
661 919 1.204146 GAGTAACATGGAGGGCCTCA 58.796 55.000 33.27 20.14 34.31 3.86
685 943 0.387565 GCATCCACCAACCGTGTTTT 59.612 50.000 0.00 0.00 41.26 2.43
691 949 2.358125 TCGTGCATCCACCAACCG 60.358 61.111 0.00 0.00 38.79 4.44
696 954 2.048597 TCACGTCGTGCATCCACC 60.049 61.111 20.56 0.00 38.79 4.61
700 960 2.763248 CGTGTCACGTCGTGCATC 59.237 61.111 20.56 12.99 36.74 3.91
706 966 3.450152 CTCACGCGTGTCACGTCG 61.450 66.667 35.74 28.11 44.73 5.12
726 986 6.606925 CGTGCACGATTGTAGCATACATCG 62.607 50.000 34.93 0.00 46.85 3.84
728 988 2.539688 CGTGCACGATTGTAGCATACAT 59.460 45.455 34.93 0.00 46.85 2.29
780 1180 1.680555 CCGAGGAGTAGACTGTCTGCT 60.681 57.143 25.32 25.32 42.20 4.24
806 1229 0.035152 TTGCTCTGCGTGGATCCATT 60.035 50.000 19.62 0.00 0.00 3.16
821 1244 0.709992 AGAGGAGAGGAGAGGTTGCT 59.290 55.000 0.00 0.00 0.00 3.91
823 1246 1.687996 GGGAGAGGAGAGGAGAGGTTG 60.688 61.905 0.00 0.00 0.00 3.77
824 1247 0.634465 GGGAGAGGAGAGGAGAGGTT 59.366 60.000 0.00 0.00 0.00 3.50
834 1278 6.466470 CCAAATTTATAGGAAGGGGAGAGGAG 60.466 46.154 0.00 0.00 0.00 3.69
910 1363 5.306419 AGGATATGAGATGAACAAGCTGCTA 59.694 40.000 0.90 0.00 0.00 3.49
915 1368 4.965814 TGGAGGATATGAGATGAACAAGC 58.034 43.478 0.00 0.00 0.00 4.01
933 1386 3.983044 ACTTGGTAACTAAGCCTGGAG 57.017 47.619 0.00 0.00 37.61 3.86
969 1443 1.082117 GTGGCGTGTTACAGATCGGG 61.082 60.000 0.00 0.00 0.00 5.14
1088 1605 1.268992 ACCATTGCCAGCTACCGGTA 61.269 55.000 14.95 14.95 0.00 4.02
1281 2500 6.438425 ACATTAGCTCTGATGGGTTTGAAATT 59.562 34.615 0.00 0.00 31.66 1.82
1354 2584 8.228035 TCTTTTATTTTTCTTTCCGTGGAAGA 57.772 30.769 1.01 0.00 35.38 2.87
1420 2650 5.294050 AGTCTCGGACGACTAAAACTTAG 57.706 43.478 7.91 0.00 42.19 2.18
1468 2698 5.179742 GGATCTCAATGCAAGATCTCATGAC 59.820 44.000 20.81 5.30 45.56 3.06
1504 2734 9.455847 CCATGTAAGAGAGAAAAAGAAAAACAG 57.544 33.333 0.00 0.00 0.00 3.16
1548 2779 7.604164 GTCTGAGTCAACTGAGATTTAATCCAA 59.396 37.037 2.64 0.00 38.43 3.53
1550 2781 6.536941 GGTCTGAGTCAACTGAGATTTAATCC 59.463 42.308 2.64 0.00 38.43 3.01
1565 2796 0.387929 GTGTGGTTCGGTCTGAGTCA 59.612 55.000 0.00 0.00 0.00 3.41
1570 2801 0.682852 TAAGGGTGTGGTTCGGTCTG 59.317 55.000 0.00 0.00 0.00 3.51
1625 2856 5.896073 AGGGTATAGAAAATGAGGTGGAG 57.104 43.478 0.00 0.00 0.00 3.86
1648 2879 7.550551 CAGCATCCTTGAATGACTTCTAAACTA 59.449 37.037 0.00 0.00 32.29 2.24
1665 2896 1.478510 CGGAGTAGACACAGCATCCTT 59.521 52.381 0.00 0.00 0.00 3.36
1684 2915 4.986875 TCTTCTATATCTCGTCCGTTCG 57.013 45.455 0.00 0.00 0.00 3.95
1744 2975 9.460019 TCAAAAGACATATCATTATCAACCACA 57.540 29.630 0.00 0.00 0.00 4.17
1785 3016 8.809468 AAAATAACAGGAAGAGGTAAGGATTC 57.191 34.615 0.00 0.00 0.00 2.52
2011 3385 1.880340 GAGGCGCTTGAGGTGATCG 60.880 63.158 7.64 0.00 0.00 3.69
2111 3485 4.046286 ACCTCAATGAAAGGGTTGCATA 57.954 40.909 0.00 0.00 38.29 3.14
2199 3573 7.539034 AGCTTCCCAAACTTGTGTATTTATT 57.461 32.000 0.00 0.00 0.00 1.40
2248 3625 7.442969 TCCAATAAAGTTATCGCACCGAATTAT 59.557 33.333 0.00 0.00 39.99 1.28
2249 3626 6.762187 TCCAATAAAGTTATCGCACCGAATTA 59.238 34.615 0.00 0.00 39.99 1.40
2254 3631 4.868450 TTCCAATAAAGTTATCGCACCG 57.132 40.909 0.00 0.00 0.00 4.94
2322 3709 2.685897 GGTGCTTGTACACTCCACAAAA 59.314 45.455 16.80 0.00 40.52 2.44
2389 3778 2.012902 GCCAAGTCATGCAGATGGGC 62.013 60.000 0.00 0.00 34.12 5.36
2690 4080 1.453928 GCCATGTTCCTAGTGGGCC 60.454 63.158 0.00 0.00 35.42 5.80
2780 4170 9.631452 GGTAGTCGTTTATATGTTTATACCTCC 57.369 37.037 0.00 0.00 0.00 4.30
2855 4258 8.169268 CCAACAGTTCTAGCGTTTTTCTATTAG 58.831 37.037 0.00 0.00 0.00 1.73
2970 4383 2.437281 AGATCCATCCACCATCTGTGTC 59.563 50.000 0.00 0.00 43.85 3.67
3932 5422 8.156820 TCAGTTGAGATTATTCAAGGAAAGTCA 58.843 33.333 0.00 0.00 37.72 3.41
3998 5492 6.380846 TCTTATCACTTATTGGCTTGCCAAAT 59.619 34.615 27.66 18.25 33.20 2.32
4071 5574 3.492337 TGGTTTCCTCGCCATTTTAGTT 58.508 40.909 0.00 0.00 0.00 2.24
4096 5599 6.905076 GGGCGCACATATTTTGTATATAATCG 59.095 38.462 10.83 0.00 36.57 3.34
4550 6132 1.490574 AGATGAGCACCCACTAGGAC 58.509 55.000 0.00 0.00 39.89 3.85
4569 6152 5.291614 GCCTATTTTGGTTAATGTCGACGTA 59.708 40.000 11.40 2.45 0.00 3.57
4704 6288 3.645884 GCAATCATATCCAACATGTGCC 58.354 45.455 0.00 0.00 0.00 5.01
4762 6346 4.509970 TGCGATAATGTTAACTTCATCCCG 59.490 41.667 7.22 3.61 0.00 5.14
4773 6357 6.089417 CGTGATGAAGCTATGCGATAATGTTA 59.911 38.462 0.00 0.00 0.00 2.41
5062 6666 4.342951 ACACCGCAACACTATATAGCCTTA 59.657 41.667 9.78 0.00 0.00 2.69
5068 6672 4.722361 TCACACACCGCAACACTATATA 57.278 40.909 0.00 0.00 0.00 0.86
5096 6700 7.438564 CAATTCCCTTGAATTCATATGCATCA 58.561 34.615 9.40 0.00 45.87 3.07
5111 6715 1.775385 AATACGGCCCAATTCCCTTG 58.225 50.000 0.00 0.00 34.42 3.61
5176 6780 3.719268 TTGAGTCACCTATTGCACCAT 57.281 42.857 0.00 0.00 0.00 3.55
5195 6832 7.598493 ACAATACGCATTGCTGAAACTAAATTT 59.402 29.630 8.31 0.00 44.62 1.82
5205 6842 4.509970 GGTATGTACAATACGCATTGCTGA 59.490 41.667 8.31 0.00 44.62 4.26
5208 6845 4.804608 TGGTATGTACAATACGCATTGC 57.195 40.909 8.31 0.00 44.62 3.56
5213 6850 3.199677 TGCCTTGGTATGTACAATACGC 58.800 45.455 0.00 3.55 0.00 4.42
5215 6852 6.460953 CCCATTTGCCTTGGTATGTACAATAC 60.461 42.308 0.00 3.45 31.99 1.89
5218 6855 3.766591 CCCATTTGCCTTGGTATGTACAA 59.233 43.478 0.00 0.00 31.99 2.41
5227 6864 3.699411 TTTTGATCCCATTTGCCTTGG 57.301 42.857 0.00 0.00 0.00 3.61
5231 6868 6.872920 TGTAGTATTTTTGATCCCATTTGCC 58.127 36.000 0.00 0.00 0.00 4.52
5233 6870 7.981225 CCCTTGTAGTATTTTTGATCCCATTTG 59.019 37.037 0.00 0.00 0.00 2.32
5241 6878 5.329399 TGGTGCCCTTGTAGTATTTTTGAT 58.671 37.500 0.00 0.00 0.00 2.57
5248 6885 3.780294 TGAGATTGGTGCCCTTGTAGTAT 59.220 43.478 0.00 0.00 0.00 2.12
5286 6924 2.711009 AGGGTCTTCCACAAATGAGTGA 59.289 45.455 0.00 0.00 42.05 3.41
5318 6956 1.119684 GTGGGAAACAGCAAAACCCT 58.880 50.000 0.00 0.00 40.98 4.34
5329 6967 2.626266 CCCCTGTTGTAAAGTGGGAAAC 59.374 50.000 0.00 0.00 40.73 2.78
5341 6979 0.396139 CTATGCATGGCCCCTGTTGT 60.396 55.000 10.16 0.00 0.00 3.32
5342 6980 0.106569 TCTATGCATGGCCCCTGTTG 60.107 55.000 10.16 0.00 0.00 3.33
5343 6981 0.106519 GTCTATGCATGGCCCCTGTT 60.107 55.000 10.16 0.00 0.00 3.16
5344 6982 1.281199 TGTCTATGCATGGCCCCTGT 61.281 55.000 10.16 0.00 0.00 4.00
5365 7004 6.414890 GCGTCAGCTCTAGATTTTATTTCAC 58.585 40.000 0.00 0.00 41.01 3.18
5376 7015 0.684479 ATGTGGGCGTCAGCTCTAGA 60.684 55.000 0.00 0.00 46.20 2.43
5409 7048 3.846744 GCGCGACTGTTAATGTGTTCAAA 60.847 43.478 12.10 0.00 0.00 2.69
5509 7150 0.856641 ACGAAACGAACGATGTGGTG 59.143 50.000 0.14 0.00 34.70 4.17
5577 7219 1.481428 GGAGAGGAATCGAGGGATGGA 60.481 57.143 0.00 0.00 31.83 3.41
5674 7319 4.785453 GAAGGGGTGGCAGCCTCG 62.785 72.222 32.43 0.00 35.71 4.63
5738 7383 3.792736 TCGATTTGGGGCGAGGGG 61.793 66.667 0.00 0.00 32.13 4.79
5771 7416 2.895680 GGATCTGAGCCTGCGTCA 59.104 61.111 4.35 0.00 0.00 4.35
5778 7423 4.925861 GCCTGCCGGATCTGAGCC 62.926 72.222 5.05 0.82 0.00 4.70
5793 7438 2.600470 GAACCAGGGTTGTGGGCC 60.600 66.667 8.73 0.00 42.54 5.80
5804 7449 1.738099 CGTCCTGAAGCGGAACCAG 60.738 63.158 0.00 0.00 34.20 4.00
5833 7478 0.106519 GGCACCTTATCCATGGCTGT 60.107 55.000 6.96 0.00 36.08 4.40
5853 7498 2.028567 CACACAGAGAAGAGAAGGGGAC 60.029 54.545 0.00 0.00 0.00 4.46
5868 7513 4.943591 GCGCGCACACACACACAG 62.944 66.667 29.10 0.00 0.00 3.66
5892 7537 3.502211 ACTCCAAATCGAATCCAACACAC 59.498 43.478 0.00 0.00 0.00 3.82
5894 7539 4.475944 CAACTCCAAATCGAATCCAACAC 58.524 43.478 0.00 0.00 0.00 3.32
5917 7562 1.335051 GGAGCTTCAAAAACCGAGCAC 60.335 52.381 0.00 0.00 37.59 4.40
5982 7627 1.610038 CAGCAGCACCAACTTGATTCA 59.390 47.619 0.00 0.00 0.00 2.57
6029 7674 4.129148 GGGCTAGGGTTGGGGCTG 62.129 72.222 0.00 0.00 0.00 4.85
6058 7704 3.245514 ACCTGTGCTACACCTCCTAGTTA 60.246 47.826 0.00 0.00 32.73 2.24
6059 7705 2.180276 CCTGTGCTACACCTCCTAGTT 58.820 52.381 0.00 0.00 32.73 2.24
6126 7772 9.008965 TCCAGATTCGAGAAGATATAAAGAGAG 57.991 37.037 0.00 0.00 0.00 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.