Multiple sequence alignment - TraesCS6B01G089500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G089500 chr6B 100.000 5921 0 0 1 5921 64924750 64930670 0.000000e+00 10935
1 TraesCS6B01G089500 chr6B 97.945 146 3 0 317 462 474503482 474503627 2.740000e-63 254
2 TraesCS6B01G089500 chr6A 92.305 3366 151 48 738 4068 35478163 35481455 0.000000e+00 4682
3 TraesCS6B01G089500 chr6A 92.979 1823 88 17 4067 5858 35481614 35483427 0.000000e+00 2621
4 TraesCS6B01G089500 chr6A 87.273 330 24 7 1 326 35477755 35478070 1.570000e-95 361
5 TraesCS6B01G089500 chr6A 93.151 73 5 0 5849 5921 35484168 35484240 2.260000e-19 108
6 TraesCS6B01G089500 chrUn 94.003 1951 94 11 2298 4242 101386944 101385011 0.000000e+00 2933
7 TraesCS6B01G089500 chrUn 94.784 671 29 2 1546 2216 101387607 101386943 0.000000e+00 1040
8 TraesCS6B01G089500 chrUn 83.455 961 89 39 4250 5160 101381036 101380096 0.000000e+00 830
9 TraesCS6B01G089500 chr1B 88.845 251 26 2 316 565 666073651 666073900 2.070000e-79 307
10 TraesCS6B01G089500 chr1B 87.451 255 29 3 316 568 392438110 392437857 2.090000e-74 291
11 TraesCS6B01G089500 chr1B 93.684 95 6 0 2209 2303 593927071 593927165 6.190000e-30 143
12 TraesCS6B01G089500 chr4A 94.340 159 9 0 304 462 610810733 610810891 1.650000e-60 244
13 TraesCS6B01G089500 chr5B 95.395 152 7 0 311 462 504737826 504737977 5.930000e-60 243
14 TraesCS6B01G089500 chr5B 82.937 252 37 6 316 565 219989555 219989802 7.720000e-54 222
15 TraesCS6B01G089500 chr4B 83.858 254 33 8 318 568 262945530 262945778 9.920000e-58 235
16 TraesCS6B01G089500 chr2B 82.800 250 36 7 318 565 245476625 245476381 3.590000e-52 217
17 TraesCS6B01G089500 chr2B 94.531 128 6 1 439 565 594837158 594837285 4.680000e-46 196
18 TraesCS6B01G089500 chr1D 83.628 226 31 5 342 565 396198339 396198560 2.160000e-49 207
19 TraesCS6B01G089500 chr1D 93.000 100 7 0 2214 2313 111540666 111540765 4.780000e-31 147
20 TraesCS6B01G089500 chr1D 95.556 90 4 0 2210 2299 469154006 469153917 1.720000e-30 145
21 TraesCS6B01G089500 chr4D 92.308 143 11 0 423 565 9296590 9296448 2.800000e-48 204
22 TraesCS6B01G089500 chr2A 90.647 139 10 3 427 565 747681035 747680900 1.310000e-41 182
23 TraesCS6B01G089500 chr7B 94.681 94 5 0 2215 2308 639796283 639796190 4.780000e-31 147
24 TraesCS6B01G089500 chr7B 90.654 107 8 2 2200 2306 701408168 701408272 2.220000e-29 141
25 TraesCS6B01G089500 chr7D 95.556 90 4 0 2210 2299 540570419 540570508 1.720000e-30 145
26 TraesCS6B01G089500 chr3D 96.512 86 3 0 2215 2300 67481316 67481231 6.190000e-30 143
27 TraesCS6B01G089500 chr3B 90.385 104 9 1 2206 2308 478078346 478078449 1.040000e-27 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G089500 chr6B 64924750 64930670 5920 False 10935 10935 100.000000 1 5921 1 chr6B.!!$F1 5920
1 TraesCS6B01G089500 chr6A 35477755 35484240 6485 False 1943 4682 91.427000 1 5921 4 chr6A.!!$F1 5920
2 TraesCS6B01G089500 chrUn 101380096 101387607 7511 True 1601 2933 90.747333 1546 5160 3 chrUn.!!$R1 3614

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
326 331 0.105039 CCATGCGAACTACTCCCTCC 59.895 60.0 0.00 0.0 0.00 4.30 F
884 889 0.169230 ACAAGCGCAAAACAACGACA 59.831 45.0 11.47 0.0 0.00 4.35 F
1679 1703 0.886563 AGTACGGCTACACCACAGAC 59.113 55.0 0.00 0.0 39.03 3.51 F
2836 2879 0.674895 ATCTCGCACCTGGTTTGCTC 60.675 55.0 0.00 0.0 37.87 4.26 F
3908 3952 0.674581 TGCTGCCCTGAAGATTGTCG 60.675 55.0 0.00 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1399 1417 0.877071 CAATGCTGGATGATACGGCC 59.123 55.000 5.92 0.0 39.46 6.13 R
1985 2009 1.218316 CGGTCCTCCAGTAAGTGCC 59.782 63.158 0.00 0.0 0.00 5.01 R
3052 3095 1.173913 AATTACAAACCTGCTCCGCC 58.826 50.000 0.00 0.0 0.00 6.13 R
3986 4030 0.179062 ATGGACTCATGCTCGCTTCC 60.179 55.000 0.00 0.0 31.34 3.46 R
5330 9559 0.179092 GCATGGCAAATCCTTCCAGC 60.179 55.000 0.00 0.0 35.26 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 1.613437 GCTCCTGATAGTCTCTCCTGC 59.387 57.143 0.00 0.00 0.00 4.85
73 74 4.341806 TCTCTCCTGCTTCATTTTTGCAAA 59.658 37.500 8.05 8.05 36.22 3.68
77 78 6.869913 TCTCCTGCTTCATTTTTGCAAATAAG 59.130 34.615 13.65 14.36 36.22 1.73
136 141 6.628185 AGAAGGTATAACTTTGTAGGACACG 58.372 40.000 4.11 0.00 0.00 4.49
152 157 3.505464 ACACGTGTGTCTATCTTAGCC 57.495 47.619 22.71 0.00 40.24 3.93
153 158 2.823747 ACACGTGTGTCTATCTTAGCCA 59.176 45.455 22.71 0.00 40.24 4.75
154 159 3.447586 ACACGTGTGTCTATCTTAGCCAT 59.552 43.478 22.71 0.00 40.24 4.40
155 160 4.643334 ACACGTGTGTCTATCTTAGCCATA 59.357 41.667 22.71 0.00 40.24 2.74
165 170 3.758755 TCTTAGCCATAGCCATGACTG 57.241 47.619 0.00 0.00 41.25 3.51
166 171 2.149578 CTTAGCCATAGCCATGACTGC 58.850 52.381 0.00 0.00 41.25 4.40
176 181 1.843368 CCATGACTGCATTGAAGGGT 58.157 50.000 0.00 0.00 30.68 4.34
177 182 2.173519 CCATGACTGCATTGAAGGGTT 58.826 47.619 0.00 0.00 30.68 4.11
178 183 2.564062 CCATGACTGCATTGAAGGGTTT 59.436 45.455 0.00 0.00 30.68 3.27
179 184 3.763360 CCATGACTGCATTGAAGGGTTTA 59.237 43.478 0.00 0.00 30.68 2.01
180 185 4.142315 CCATGACTGCATTGAAGGGTTTAG 60.142 45.833 0.00 0.00 30.68 1.85
181 186 4.365514 TGACTGCATTGAAGGGTTTAGA 57.634 40.909 0.00 0.00 0.00 2.10
182 187 4.072131 TGACTGCATTGAAGGGTTTAGAC 58.928 43.478 0.00 0.00 0.00 2.59
207 212 1.270550 GACAGAGGGCATGTTTGGTTG 59.729 52.381 0.00 0.00 0.00 3.77
221 226 4.217550 TGTTTGGTTGGCATACTAAGCTTC 59.782 41.667 0.00 0.00 0.00 3.86
222 227 2.999331 TGGTTGGCATACTAAGCTTCC 58.001 47.619 0.00 0.00 0.00 3.46
225 230 1.200519 TGGCATACTAAGCTTCCCGT 58.799 50.000 0.00 1.40 0.00 5.28
231 236 4.201822 GCATACTAAGCTTCCCGTCTTTTG 60.202 45.833 0.00 0.00 0.00 2.44
240 245 1.234615 CCCGTCTTTTGCCACGTCAT 61.235 55.000 0.00 0.00 34.06 3.06
244 249 2.724839 CGTCTTTTGCCACGTCATAAGC 60.725 50.000 0.00 0.00 0.00 3.09
264 269 1.345415 CCAGGCAAGCTTGATTGGTTT 59.655 47.619 30.39 3.52 32.15 3.27
270 275 3.006859 GCAAGCTTGATTGGTTTAACCCT 59.993 43.478 30.39 0.00 37.50 4.34
281 286 6.616237 TTGGTTTAACCCTTGTTTGGTTTA 57.384 33.333 12.02 0.00 43.52 2.01
284 289 6.877855 TGGTTTAACCCTTGTTTGGTTTAAAC 59.122 34.615 12.02 9.98 43.52 2.01
286 291 7.278424 GGTTTAACCCTTGTTTGGTTTAAACTC 59.722 37.037 17.50 8.74 43.52 3.01
295 300 6.102663 TGTTTGGTTTAAACTCACATTGTGG 58.897 36.000 17.50 9.80 46.96 4.17
310 315 4.529377 ACATTGTGGCAAGATTCTTTCCAT 59.471 37.500 18.75 2.96 0.00 3.41
317 322 3.119708 GCAAGATTCTTTCCATGCGAACT 60.120 43.478 0.00 0.00 30.76 3.01
318 323 4.094887 GCAAGATTCTTTCCATGCGAACTA 59.905 41.667 0.00 0.00 30.76 2.24
319 324 5.563842 CAAGATTCTTTCCATGCGAACTAC 58.436 41.667 0.00 0.00 0.00 2.73
320 325 5.091261 AGATTCTTTCCATGCGAACTACT 57.909 39.130 0.00 0.00 0.00 2.57
321 326 5.112686 AGATTCTTTCCATGCGAACTACTC 58.887 41.667 0.00 0.00 0.00 2.59
322 327 3.247006 TCTTTCCATGCGAACTACTCC 57.753 47.619 0.00 0.00 0.00 3.85
323 328 2.093658 TCTTTCCATGCGAACTACTCCC 60.094 50.000 0.00 0.00 0.00 4.30
324 329 1.568504 TTCCATGCGAACTACTCCCT 58.431 50.000 0.00 0.00 0.00 4.20
325 330 1.112113 TCCATGCGAACTACTCCCTC 58.888 55.000 0.00 0.00 0.00 4.30
326 331 0.105039 CCATGCGAACTACTCCCTCC 59.895 60.000 0.00 0.00 0.00 4.30
327 332 0.249073 CATGCGAACTACTCCCTCCG 60.249 60.000 0.00 0.00 0.00 4.63
328 333 0.683504 ATGCGAACTACTCCCTCCGT 60.684 55.000 0.00 0.00 0.00 4.69
329 334 0.896940 TGCGAACTACTCCCTCCGTT 60.897 55.000 0.00 0.00 0.00 4.44
330 335 0.245813 GCGAACTACTCCCTCCGTTT 59.754 55.000 0.00 0.00 0.00 3.60
331 336 1.735038 GCGAACTACTCCCTCCGTTTC 60.735 57.143 0.00 0.00 0.00 2.78
332 337 1.135170 CGAACTACTCCCTCCGTTTCC 60.135 57.143 0.00 0.00 0.00 3.13
333 338 1.897802 GAACTACTCCCTCCGTTTCCA 59.102 52.381 0.00 0.00 0.00 3.53
334 339 2.019807 ACTACTCCCTCCGTTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
335 340 2.332117 ACTACTCCCTCCGTTTCCAAA 58.668 47.619 0.00 0.00 0.00 3.28
336 341 2.910977 ACTACTCCCTCCGTTTCCAAAT 59.089 45.455 0.00 0.00 0.00 2.32
337 342 4.098894 ACTACTCCCTCCGTTTCCAAATA 58.901 43.478 0.00 0.00 0.00 1.40
338 343 3.345508 ACTCCCTCCGTTTCCAAATAC 57.654 47.619 0.00 0.00 0.00 1.89
339 344 2.910977 ACTCCCTCCGTTTCCAAATACT 59.089 45.455 0.00 0.00 0.00 2.12
340 345 3.329814 ACTCCCTCCGTTTCCAAATACTT 59.670 43.478 0.00 0.00 0.00 2.24
341 346 3.681593 TCCCTCCGTTTCCAAATACTTG 58.318 45.455 0.00 0.00 0.00 3.16
342 347 3.073356 TCCCTCCGTTTCCAAATACTTGT 59.927 43.478 0.00 0.00 0.00 3.16
343 348 3.439129 CCCTCCGTTTCCAAATACTTGTC 59.561 47.826 0.00 0.00 0.00 3.18
344 349 4.324267 CCTCCGTTTCCAAATACTTGTCT 58.676 43.478 0.00 0.00 0.00 3.41
345 350 4.760204 CCTCCGTTTCCAAATACTTGTCTT 59.240 41.667 0.00 0.00 0.00 3.01
346 351 5.240844 CCTCCGTTTCCAAATACTTGTCTTT 59.759 40.000 0.00 0.00 0.00 2.52
347 352 6.308371 TCCGTTTCCAAATACTTGTCTTTC 57.692 37.500 0.00 0.00 0.00 2.62
348 353 6.059484 TCCGTTTCCAAATACTTGTCTTTCT 58.941 36.000 0.00 0.00 0.00 2.52
349 354 7.218614 TCCGTTTCCAAATACTTGTCTTTCTA 58.781 34.615 0.00 0.00 0.00 2.10
350 355 7.386848 TCCGTTTCCAAATACTTGTCTTTCTAG 59.613 37.037 0.00 0.00 0.00 2.43
351 356 7.360946 CCGTTTCCAAATACTTGTCTTTCTAGG 60.361 40.741 0.00 0.00 0.00 3.02
352 357 7.306213 GTTTCCAAATACTTGTCTTTCTAGGC 58.694 38.462 0.00 0.00 0.00 3.93
353 358 6.121776 TCCAAATACTTGTCTTTCTAGGCA 57.878 37.500 0.00 0.00 33.22 4.75
354 359 6.721318 TCCAAATACTTGTCTTTCTAGGCAT 58.279 36.000 0.00 0.00 35.56 4.40
355 360 7.175104 TCCAAATACTTGTCTTTCTAGGCATT 58.825 34.615 0.00 0.00 35.56 3.56
356 361 7.669722 TCCAAATACTTGTCTTTCTAGGCATTT 59.330 33.333 0.00 0.00 35.56 2.32
357 362 7.970614 CCAAATACTTGTCTTTCTAGGCATTTC 59.029 37.037 0.00 0.00 35.56 2.17
358 363 8.514594 CAAATACTTGTCTTTCTAGGCATTTCA 58.485 33.333 0.00 0.00 35.56 2.69
359 364 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
360 365 6.959639 ACTTGTCTTTCTAGGCATTTCAAA 57.040 33.333 0.00 0.00 35.56 2.69
361 366 7.530426 ACTTGTCTTTCTAGGCATTTCAAAT 57.470 32.000 0.00 0.00 35.56 2.32
362 367 8.635765 ACTTGTCTTTCTAGGCATTTCAAATA 57.364 30.769 0.00 0.00 35.56 1.40
363 368 8.734386 ACTTGTCTTTCTAGGCATTTCAAATAG 58.266 33.333 0.00 0.00 35.56 1.73
364 369 8.862325 TTGTCTTTCTAGGCATTTCAAATAGA 57.138 30.769 0.00 0.00 35.56 1.98
365 370 8.268850 TGTCTTTCTAGGCATTTCAAATAGAC 57.731 34.615 0.00 0.00 29.10 2.59
366 371 8.103305 TGTCTTTCTAGGCATTTCAAATAGACT 58.897 33.333 0.00 1.60 29.10 3.24
367 372 8.608317 GTCTTTCTAGGCATTTCAAATAGACTC 58.392 37.037 0.00 0.00 0.00 3.36
368 373 8.321353 TCTTTCTAGGCATTTCAAATAGACTCA 58.679 33.333 0.00 0.00 0.00 3.41
369 374 8.862325 TTTCTAGGCATTTCAAATAGACTCAA 57.138 30.769 0.00 0.00 0.00 3.02
370 375 9.466497 TTTCTAGGCATTTCAAATAGACTCAAT 57.534 29.630 0.00 0.00 0.00 2.57
375 380 8.993121 AGGCATTTCAAATAGACTCAATATACG 58.007 33.333 0.00 0.00 0.00 3.06
376 381 8.230486 GGCATTTCAAATAGACTCAATATACGG 58.770 37.037 0.00 0.00 0.00 4.02
377 382 8.988934 GCATTTCAAATAGACTCAATATACGGA 58.011 33.333 0.00 0.00 0.00 4.69
388 393 8.948145 AGACTCAATATACGGATGTATGTAGAC 58.052 37.037 0.00 0.00 41.37 2.59
389 394 8.631480 ACTCAATATACGGATGTATGTAGACA 57.369 34.615 0.00 0.00 41.37 3.41
390 395 9.244292 ACTCAATATACGGATGTATGTAGACAT 57.756 33.333 0.08 0.08 41.37 3.06
421 426 7.807977 AAGTGTAGATTCACTCATTTTGTGT 57.192 32.000 0.00 0.00 46.25 3.72
422 427 7.426929 AGTGTAGATTCACTCATTTTGTGTC 57.573 36.000 0.00 0.00 44.07 3.67
423 428 6.146184 AGTGTAGATTCACTCATTTTGTGTCG 59.854 38.462 0.00 0.00 44.07 4.35
424 429 5.989168 TGTAGATTCACTCATTTTGTGTCGT 59.011 36.000 0.00 0.00 36.83 4.34
425 430 7.115805 GTGTAGATTCACTCATTTTGTGTCGTA 59.884 37.037 0.00 0.00 36.83 3.43
426 431 7.817478 TGTAGATTCACTCATTTTGTGTCGTAT 59.183 33.333 0.00 0.00 36.83 3.06
427 432 7.065216 AGATTCACTCATTTTGTGTCGTATG 57.935 36.000 0.00 0.00 36.83 2.39
428 433 6.650807 AGATTCACTCATTTTGTGTCGTATGT 59.349 34.615 0.00 0.00 36.83 2.29
429 434 7.817478 AGATTCACTCATTTTGTGTCGTATGTA 59.183 33.333 0.00 0.00 36.83 2.29
430 435 6.944557 TCACTCATTTTGTGTCGTATGTAG 57.055 37.500 0.00 0.00 36.83 2.74
431 436 6.452242 TCACTCATTTTGTGTCGTATGTAGT 58.548 36.000 0.00 0.00 36.83 2.73
432 437 6.584942 TCACTCATTTTGTGTCGTATGTAGTC 59.415 38.462 0.00 0.00 36.83 2.59
433 438 6.364976 CACTCATTTTGTGTCGTATGTAGTCA 59.635 38.462 0.00 0.00 0.00 3.41
434 439 6.365247 ACTCATTTTGTGTCGTATGTAGTCAC 59.635 38.462 0.00 0.00 0.00 3.67
435 440 6.452242 TCATTTTGTGTCGTATGTAGTCACT 58.548 36.000 0.00 0.00 0.00 3.41
436 441 6.926826 TCATTTTGTGTCGTATGTAGTCACTT 59.073 34.615 0.00 0.00 0.00 3.16
437 442 6.519353 TTTTGTGTCGTATGTAGTCACTTG 57.481 37.500 0.00 0.00 0.00 3.16
438 443 4.841443 TGTGTCGTATGTAGTCACTTGT 57.159 40.909 0.00 0.00 0.00 3.16
439 444 5.190992 TGTGTCGTATGTAGTCACTTGTT 57.809 39.130 0.00 0.00 0.00 2.83
440 445 6.316440 TGTGTCGTATGTAGTCACTTGTTA 57.684 37.500 0.00 0.00 0.00 2.41
441 446 6.737118 TGTGTCGTATGTAGTCACTTGTTAA 58.263 36.000 0.00 0.00 0.00 2.01
442 447 7.201835 TGTGTCGTATGTAGTCACTTGTTAAA 58.798 34.615 0.00 0.00 0.00 1.52
443 448 7.705752 TGTGTCGTATGTAGTCACTTGTTAAAA 59.294 33.333 0.00 0.00 0.00 1.52
444 449 8.706035 GTGTCGTATGTAGTCACTTGTTAAAAT 58.294 33.333 0.00 0.00 0.00 1.82
445 450 8.918658 TGTCGTATGTAGTCACTTGTTAAAATC 58.081 33.333 0.00 0.00 0.00 2.17
446 451 9.136952 GTCGTATGTAGTCACTTGTTAAAATCT 57.863 33.333 0.00 0.00 0.00 2.40
447 452 9.350357 TCGTATGTAGTCACTTGTTAAAATCTC 57.650 33.333 0.00 0.00 0.00 2.75
448 453 9.355215 CGTATGTAGTCACTTGTTAAAATCTCT 57.645 33.333 0.00 0.00 0.00 3.10
466 471 7.412853 AATCTCTAGAAAGACAAGTACTCCC 57.587 40.000 0.00 0.00 0.00 4.30
467 472 6.142259 TCTCTAGAAAGACAAGTACTCCCT 57.858 41.667 0.00 0.00 0.00 4.20
468 473 6.181908 TCTCTAGAAAGACAAGTACTCCCTC 58.818 44.000 0.00 0.00 0.00 4.30
469 474 5.262804 TCTAGAAAGACAAGTACTCCCTCC 58.737 45.833 0.00 0.00 0.00 4.30
470 475 2.826725 AGAAAGACAAGTACTCCCTCCG 59.173 50.000 0.00 0.00 0.00 4.63
471 476 2.305858 AAGACAAGTACTCCCTCCGT 57.694 50.000 0.00 0.00 0.00 4.69
472 477 2.305858 AGACAAGTACTCCCTCCGTT 57.694 50.000 0.00 0.00 0.00 4.44
473 478 2.169330 AGACAAGTACTCCCTCCGTTC 58.831 52.381 0.00 0.00 0.00 3.95
474 479 1.204231 GACAAGTACTCCCTCCGTTCC 59.796 57.143 0.00 0.00 0.00 3.62
475 480 1.263356 CAAGTACTCCCTCCGTTCCA 58.737 55.000 0.00 0.00 0.00 3.53
476 481 1.621814 CAAGTACTCCCTCCGTTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
477 482 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
478 483 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
479 484 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
480 485 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
481 486 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
482 487 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
483 488 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
484 489 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
485 490 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
486 491 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
487 492 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
488 493 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
489 494 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
490 495 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
491 496 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
492 497 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
493 498 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
494 499 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
495 500 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
496 501 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
497 502 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
498 503 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
499 504 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
500 505 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
501 506 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
502 507 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
503 508 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
504 509 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
505 510 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
506 511 8.434392 AGATGACCCAACTTTGTACTAACTTTA 58.566 33.333 0.00 0.00 0.00 1.85
507 512 8.617290 ATGACCCAACTTTGTACTAACTTTAG 57.383 34.615 0.00 0.00 36.82 1.85
508 513 7.567458 TGACCCAACTTTGTACTAACTTTAGT 58.433 34.615 6.85 6.85 45.39 2.24
509 514 8.703743 TGACCCAACTTTGTACTAACTTTAGTA 58.296 33.333 4.98 4.98 43.36 1.82
510 515 9.716531 GACCCAACTTTGTACTAACTTTAGTAT 57.283 33.333 11.18 0.00 45.11 2.12
532 537 8.432805 AGTATAAAGTTGGGTCATCTATTCTGG 58.567 37.037 0.00 0.00 0.00 3.86
533 538 5.779241 AAAGTTGGGTCATCTATTCTGGA 57.221 39.130 0.00 0.00 0.00 3.86
534 539 5.779241 AAGTTGGGTCATCTATTCTGGAA 57.221 39.130 0.00 0.00 0.00 3.53
535 540 5.104259 AGTTGGGTCATCTATTCTGGAAC 57.896 43.478 0.00 0.00 0.00 3.62
536 541 3.819564 TGGGTCATCTATTCTGGAACG 57.180 47.619 0.00 0.00 0.00 3.95
537 542 2.434336 TGGGTCATCTATTCTGGAACGG 59.566 50.000 0.00 0.00 0.00 4.44
538 543 2.698797 GGGTCATCTATTCTGGAACGGA 59.301 50.000 0.00 0.00 45.11 4.69
547 552 2.544844 TCTGGAACGGAGGGAGTATT 57.455 50.000 0.00 0.00 39.80 1.89
548 553 2.829023 TCTGGAACGGAGGGAGTATTT 58.171 47.619 0.00 0.00 39.80 1.40
549 554 3.985127 TCTGGAACGGAGGGAGTATTTA 58.015 45.455 0.00 0.00 39.80 1.40
550 555 3.958798 TCTGGAACGGAGGGAGTATTTAG 59.041 47.826 0.00 0.00 39.80 1.85
551 556 3.036091 TGGAACGGAGGGAGTATTTAGG 58.964 50.000 0.00 0.00 0.00 2.69
552 557 3.303049 GGAACGGAGGGAGTATTTAGGA 58.697 50.000 0.00 0.00 0.00 2.94
553 558 3.708121 GGAACGGAGGGAGTATTTAGGAA 59.292 47.826 0.00 0.00 0.00 3.36
554 559 4.442612 GGAACGGAGGGAGTATTTAGGAAC 60.443 50.000 0.00 0.00 0.00 3.62
555 560 2.692041 ACGGAGGGAGTATTTAGGAACG 59.308 50.000 0.00 0.00 0.00 3.95
556 561 2.035576 CGGAGGGAGTATTTAGGAACGG 59.964 54.545 0.00 0.00 0.00 4.44
557 562 3.303049 GGAGGGAGTATTTAGGAACGGA 58.697 50.000 0.00 0.00 0.00 4.69
558 563 3.321396 GGAGGGAGTATTTAGGAACGGAG 59.679 52.174 0.00 0.00 0.00 4.63
559 564 3.306613 AGGGAGTATTTAGGAACGGAGG 58.693 50.000 0.00 0.00 0.00 4.30
560 565 2.367894 GGGAGTATTTAGGAACGGAGGG 59.632 54.545 0.00 0.00 0.00 4.30
561 566 3.303049 GGAGTATTTAGGAACGGAGGGA 58.697 50.000 0.00 0.00 0.00 4.20
562 567 3.321396 GGAGTATTTAGGAACGGAGGGAG 59.679 52.174 0.00 0.00 0.00 4.30
567 572 7.477008 AGTATTTAGGAACGGAGGGAGTATAT 58.523 38.462 0.00 0.00 0.00 0.86
582 587 4.519350 GGAGTATATCTCACATGTCACCGA 59.481 45.833 0.00 0.00 44.40 4.69
589 594 3.378427 TCTCACATGTCACCGACTCATAG 59.622 47.826 0.00 0.00 33.15 2.23
599 604 2.233922 ACCGACTCATAGAAAGTGTGGG 59.766 50.000 0.00 0.00 35.40 4.61
600 605 2.418746 CCGACTCATAGAAAGTGTGGGG 60.419 54.545 0.00 0.00 0.00 4.96
603 608 4.508662 GACTCATAGAAAGTGTGGGGAAG 58.491 47.826 0.00 0.00 0.00 3.46
609 614 3.185455 AGAAAGTGTGGGGAAGCTATCT 58.815 45.455 0.00 0.00 0.00 1.98
616 621 3.266772 TGTGGGGAAGCTATCTCAAATGT 59.733 43.478 0.00 0.00 0.00 2.71
628 633 2.811431 TCTCAAATGTGGCGTCGATTTT 59.189 40.909 0.00 0.00 0.00 1.82
641 646 0.730840 CGATTTTGACCGCCTAACCC 59.269 55.000 0.00 0.00 0.00 4.11
645 650 3.505480 TTTTGACCGCCTAACCCTAAA 57.495 42.857 0.00 0.00 0.00 1.85
647 652 1.350071 TGACCGCCTAACCCTAAACA 58.650 50.000 0.00 0.00 0.00 2.83
648 653 1.698532 TGACCGCCTAACCCTAAACAA 59.301 47.619 0.00 0.00 0.00 2.83
649 654 2.289819 TGACCGCCTAACCCTAAACAAG 60.290 50.000 0.00 0.00 0.00 3.16
650 655 1.701292 ACCGCCTAACCCTAAACAAGT 59.299 47.619 0.00 0.00 0.00 3.16
651 656 2.081462 CCGCCTAACCCTAAACAAGTG 58.919 52.381 0.00 0.00 0.00 3.16
652 657 2.551504 CCGCCTAACCCTAAACAAGTGT 60.552 50.000 0.00 0.00 0.00 3.55
653 658 2.482721 CGCCTAACCCTAAACAAGTGTG 59.517 50.000 0.00 0.00 0.00 3.82
654 659 3.746940 GCCTAACCCTAAACAAGTGTGA 58.253 45.455 0.00 0.00 0.00 3.58
655 660 3.501062 GCCTAACCCTAAACAAGTGTGAC 59.499 47.826 0.00 0.00 0.00 3.67
656 661 4.710324 CCTAACCCTAAACAAGTGTGACA 58.290 43.478 0.00 0.00 0.00 3.58
657 662 5.127491 CCTAACCCTAAACAAGTGTGACAA 58.873 41.667 0.00 0.00 0.00 3.18
658 663 5.591067 CCTAACCCTAAACAAGTGTGACAAA 59.409 40.000 0.00 0.00 0.00 2.83
659 664 5.986501 AACCCTAAACAAGTGTGACAAAA 57.013 34.783 0.00 0.00 0.00 2.44
660 665 5.986501 ACCCTAAACAAGTGTGACAAAAA 57.013 34.783 0.00 0.00 0.00 1.94
693 698 7.920682 GTGTGACAAAAAGGTAGATCAAACAAT 59.079 33.333 0.00 0.00 0.00 2.71
695 700 7.382218 GTGACAAAAAGGTAGATCAAACAATGG 59.618 37.037 0.00 0.00 0.00 3.16
696 701 6.223120 ACAAAAAGGTAGATCAAACAATGGC 58.777 36.000 0.00 0.00 0.00 4.40
697 702 6.183360 ACAAAAAGGTAGATCAAACAATGGCA 60.183 34.615 0.00 0.00 0.00 4.92
698 703 6.418057 AAAAGGTAGATCAAACAATGGCAA 57.582 33.333 0.00 0.00 0.00 4.52
699 704 6.418057 AAAGGTAGATCAAACAATGGCAAA 57.582 33.333 0.00 0.00 0.00 3.68
700 705 6.418057 AAGGTAGATCAAACAATGGCAAAA 57.582 33.333 0.00 0.00 0.00 2.44
701 706 6.418057 AGGTAGATCAAACAATGGCAAAAA 57.582 33.333 0.00 0.00 0.00 1.94
702 707 6.458210 AGGTAGATCAAACAATGGCAAAAAG 58.542 36.000 0.00 0.00 0.00 2.27
703 708 5.639082 GGTAGATCAAACAATGGCAAAAAGG 59.361 40.000 0.00 0.00 0.00 3.11
704 709 5.294734 AGATCAAACAATGGCAAAAAGGT 57.705 34.783 0.00 0.00 0.00 3.50
705 710 6.418057 AGATCAAACAATGGCAAAAAGGTA 57.582 33.333 0.00 0.00 0.00 3.08
706 711 6.223120 AGATCAAACAATGGCAAAAAGGTAC 58.777 36.000 0.00 0.00 0.00 3.34
708 713 5.596845 TCAAACAATGGCAAAAAGGTACTC 58.403 37.500 0.00 0.00 38.49 2.59
709 714 5.362430 TCAAACAATGGCAAAAAGGTACTCT 59.638 36.000 0.00 0.00 38.49 3.24
710 715 5.869649 AACAATGGCAAAAAGGTACTCTT 57.130 34.783 0.00 0.00 38.49 2.85
711 716 6.969993 AACAATGGCAAAAAGGTACTCTTA 57.030 33.333 0.00 0.00 38.49 2.10
712 717 7.539034 AACAATGGCAAAAAGGTACTCTTAT 57.461 32.000 0.00 0.00 38.49 1.73
713 718 7.158099 ACAATGGCAAAAAGGTACTCTTATC 57.842 36.000 0.00 0.00 38.49 1.75
714 719 6.719370 ACAATGGCAAAAAGGTACTCTTATCA 59.281 34.615 0.00 0.00 38.49 2.15
715 720 7.232534 ACAATGGCAAAAAGGTACTCTTATCAA 59.767 33.333 0.00 0.00 38.49 2.57
716 721 7.775053 ATGGCAAAAAGGTACTCTTATCAAA 57.225 32.000 0.00 0.00 38.49 2.69
717 722 6.977213 TGGCAAAAAGGTACTCTTATCAAAC 58.023 36.000 0.00 0.00 38.49 2.93
718 723 6.547880 TGGCAAAAAGGTACTCTTATCAAACA 59.452 34.615 0.00 0.00 38.49 2.83
719 724 7.068839 TGGCAAAAAGGTACTCTTATCAAACAA 59.931 33.333 0.00 0.00 38.49 2.83
720 725 8.088365 GGCAAAAAGGTACTCTTATCAAACAAT 58.912 33.333 0.00 0.00 38.49 2.71
721 726 8.915654 GCAAAAAGGTACTCTTATCAAACAATG 58.084 33.333 0.00 0.00 38.49 2.82
724 729 8.918202 AAAGGTACTCTTATCAAACAATGACA 57.082 30.769 0.00 0.00 38.54 3.58
725 730 8.918202 AAGGTACTCTTATCAAACAATGACAA 57.082 30.769 0.00 0.00 38.54 3.18
726 731 8.918202 AGGTACTCTTATCAAACAATGACAAA 57.082 30.769 0.00 0.00 41.93 2.83
727 732 9.349713 AGGTACTCTTATCAAACAATGACAAAA 57.650 29.630 0.00 0.00 41.93 2.44
814 819 5.305585 TGTAGGTAAAAAGTTCAGGCAGAG 58.694 41.667 0.00 0.00 0.00 3.35
832 837 2.109126 GCGGCCTTCACCATCAGTC 61.109 63.158 0.00 0.00 0.00 3.51
833 838 1.296392 CGGCCTTCACCATCAGTCA 59.704 57.895 0.00 0.00 0.00 3.41
837 842 1.002430 GCCTTCACCATCAGTCAGTCA 59.998 52.381 0.00 0.00 0.00 3.41
839 844 2.613977 CCTTCACCATCAGTCAGTCACC 60.614 54.545 0.00 0.00 0.00 4.02
840 845 2.015456 TCACCATCAGTCAGTCACCT 57.985 50.000 0.00 0.00 0.00 4.00
842 847 1.620323 CACCATCAGTCAGTCACCTCA 59.380 52.381 0.00 0.00 0.00 3.86
843 848 1.898472 ACCATCAGTCAGTCACCTCAG 59.102 52.381 0.00 0.00 0.00 3.35
844 849 1.898472 CCATCAGTCAGTCACCTCAGT 59.102 52.381 0.00 0.00 0.00 3.41
845 850 2.353505 CCATCAGTCAGTCACCTCAGTG 60.354 54.545 0.00 0.00 46.00 3.66
846 851 0.676184 TCAGTCAGTCACCTCAGTGC 59.324 55.000 0.00 0.00 44.16 4.40
847 852 0.665670 CAGTCAGTCACCTCAGTGCG 60.666 60.000 0.00 0.00 44.16 5.34
848 853 1.109920 AGTCAGTCACCTCAGTGCGT 61.110 55.000 0.00 0.00 44.16 5.24
849 854 0.664767 GTCAGTCACCTCAGTGCGTC 60.665 60.000 0.00 0.00 44.16 5.19
850 855 1.373497 CAGTCACCTCAGTGCGTCC 60.373 63.158 0.00 0.00 44.16 4.79
851 856 2.430921 GTCACCTCAGTGCGTCCG 60.431 66.667 0.00 0.00 44.16 4.79
852 857 2.596338 TCACCTCAGTGCGTCCGA 60.596 61.111 0.00 0.00 44.16 4.55
853 858 2.197605 TCACCTCAGTGCGTCCGAA 61.198 57.895 0.00 0.00 44.16 4.30
854 859 2.022129 CACCTCAGTGCGTCCGAAC 61.022 63.158 0.00 0.00 37.14 3.95
855 860 2.201022 ACCTCAGTGCGTCCGAACT 61.201 57.895 0.00 0.00 33.43 3.01
856 861 0.892358 ACCTCAGTGCGTCCGAACTA 60.892 55.000 0.00 0.00 30.90 2.24
857 862 0.179161 CCTCAGTGCGTCCGAACTAG 60.179 60.000 0.00 0.00 30.90 2.57
858 863 0.522180 CTCAGTGCGTCCGAACTAGT 59.478 55.000 0.00 0.00 30.90 2.57
859 864 1.736126 CTCAGTGCGTCCGAACTAGTA 59.264 52.381 0.00 0.00 30.90 1.82
860 865 1.736126 TCAGTGCGTCCGAACTAGTAG 59.264 52.381 0.00 0.00 30.90 2.57
861 866 1.467734 CAGTGCGTCCGAACTAGTAGT 59.532 52.381 0.00 0.00 30.90 2.73
862 867 2.674852 CAGTGCGTCCGAACTAGTAGTA 59.325 50.000 2.50 0.00 30.90 1.82
863 868 2.935201 AGTGCGTCCGAACTAGTAGTAG 59.065 50.000 2.50 2.87 30.90 2.57
864 869 2.675348 GTGCGTCCGAACTAGTAGTAGT 59.325 50.000 2.50 4.29 41.61 2.73
865 870 3.865745 GTGCGTCCGAACTAGTAGTAGTA 59.134 47.826 10.68 0.00 38.66 1.82
866 871 3.865745 TGCGTCCGAACTAGTAGTAGTAC 59.134 47.826 10.68 4.74 38.66 2.73
884 889 0.169230 ACAAGCGCAAAACAACGACA 59.831 45.000 11.47 0.00 0.00 4.35
1150 1165 2.284699 ACTTCCACCTCCTCCCCG 60.285 66.667 0.00 0.00 0.00 5.73
1289 1304 1.274167 CAAGGTTAGACCCGTACAGCA 59.726 52.381 0.00 0.00 39.75 4.41
1290 1305 1.861982 AGGTTAGACCCGTACAGCAT 58.138 50.000 0.00 0.00 39.75 3.79
1291 1306 2.185387 AGGTTAGACCCGTACAGCATT 58.815 47.619 0.00 0.00 39.75 3.56
1303 1318 5.038683 CCGTACAGCATTATTACTTCACGA 58.961 41.667 0.00 0.00 0.00 4.35
1337 1352 9.216117 GTGTGATTTAACTGAACCTAGTAACAT 57.784 33.333 0.00 0.00 0.00 2.71
1399 1417 5.088739 GTGATGGTAATTTGTCGCAGAAAG 58.911 41.667 0.00 0.00 39.69 2.62
1424 1442 3.743521 GTATCATCCAGCATTGTGCCTA 58.256 45.455 0.00 0.00 46.52 3.93
1459 1477 9.857957 ATTTTAAAGACTTCTCTCTAGGTTACG 57.142 33.333 0.00 0.00 0.00 3.18
1460 1478 7.992754 TTAAAGACTTCTCTCTAGGTTACGT 57.007 36.000 0.00 0.00 0.00 3.57
1461 1479 5.883503 AAGACTTCTCTCTAGGTTACGTG 57.116 43.478 0.00 0.00 0.00 4.49
1462 1480 5.163281 AGACTTCTCTCTAGGTTACGTGA 57.837 43.478 0.00 0.00 0.00 4.35
1463 1481 4.937015 AGACTTCTCTCTAGGTTACGTGAC 59.063 45.833 1.05 1.05 0.00 3.67
1464 1482 4.009002 ACTTCTCTCTAGGTTACGTGACC 58.991 47.826 21.25 21.25 40.11 4.02
1465 1483 3.708403 TCTCTCTAGGTTACGTGACCA 57.292 47.619 28.93 15.04 42.35 4.02
1466 1484 4.025040 TCTCTCTAGGTTACGTGACCAA 57.975 45.455 28.93 14.18 42.35 3.67
1467 1485 4.597004 TCTCTCTAGGTTACGTGACCAAT 58.403 43.478 28.93 13.64 42.35 3.16
1468 1486 5.014858 TCTCTCTAGGTTACGTGACCAATT 58.985 41.667 28.93 12.94 42.35 2.32
1473 1491 4.345859 AGGTTACGTGACCAATTTCTCA 57.654 40.909 28.93 0.00 42.35 3.27
1490 1508 8.408601 CAATTTCTCACTCGATCCCATAAAAAT 58.591 33.333 0.00 0.00 0.00 1.82
1497 1516 6.710295 CACTCGATCCCATAAAAATATGACCA 59.290 38.462 0.00 0.00 0.00 4.02
1536 1555 8.537728 AAATTAACTATGGATGGAATTGCTCA 57.462 30.769 0.00 0.00 0.00 4.26
1550 1574 7.222872 TGGAATTGCTCAAACATTTAATTGGT 58.777 30.769 0.00 0.00 0.00 3.67
1679 1703 0.886563 AGTACGGCTACACCACAGAC 59.113 55.000 0.00 0.00 39.03 3.51
1985 2009 3.806591 CAGTGCTTGCAATTGGAGG 57.193 52.632 7.72 6.10 0.00 4.30
2223 2250 1.697982 ACACAAACACCTACTCCCTCC 59.302 52.381 0.00 0.00 0.00 4.30
2235 2263 6.041751 CACCTACTCCCTCCGTAAAGAAATAT 59.958 42.308 0.00 0.00 0.00 1.28
2258 2286 7.701809 ATAAGAGCGTTTAGATCACTAAAGC 57.298 36.000 0.00 0.00 45.42 3.51
2297 2327 9.495382 ACTCTTATATTTCTTTACAGAGGGAGT 57.505 33.333 0.00 0.00 32.21 3.85
2331 2361 5.305902 TCCCAGTGTTACATGTTGACTTAGA 59.694 40.000 2.30 0.67 0.00 2.10
2444 2476 9.959721 TCTGATTTTATTTGGCTAAGTAAGTCT 57.040 29.630 11.00 0.00 0.00 3.24
2446 2478 9.959721 TGATTTTATTTGGCTAAGTAAGTCTCT 57.040 29.630 11.00 0.00 0.00 3.10
2498 2530 7.852971 TTTCCTTTAGTATTTCCGTATGTGG 57.147 36.000 0.00 0.00 0.00 4.17
2539 2574 6.472016 TGTATCAAACTTCTGCTTCCATGTA 58.528 36.000 0.00 0.00 0.00 2.29
2565 2605 3.961408 GAGCAGGGACAGATCCTACTAAA 59.039 47.826 0.00 0.00 45.46 1.85
2609 2649 8.980481 ATAATAAAATGTACAAGCCTAGCAGT 57.020 30.769 0.00 0.00 0.00 4.40
2610 2650 6.927294 ATAAAATGTACAAGCCTAGCAGTC 57.073 37.500 0.00 0.00 0.00 3.51
2611 2651 4.559862 AAATGTACAAGCCTAGCAGTCT 57.440 40.909 0.00 0.00 0.00 3.24
2612 2652 5.677319 AAATGTACAAGCCTAGCAGTCTA 57.323 39.130 0.00 0.00 0.00 2.59
2619 2659 5.329399 ACAAGCCTAGCAGTCTAGCTATAT 58.671 41.667 0.00 0.00 45.32 0.86
2683 2725 8.034804 GTCTTTGCAATTATATTTTCACTGGGT 58.965 33.333 0.00 0.00 0.00 4.51
2782 2825 7.430760 AAGATCTTCTGGAAGCAGTACTAAT 57.569 36.000 0.88 0.00 38.28 1.73
2831 2874 2.086869 CAATCAATCTCGCACCTGGTT 58.913 47.619 0.00 0.00 0.00 3.67
2836 2879 0.674895 ATCTCGCACCTGGTTTGCTC 60.675 55.000 0.00 0.00 37.87 4.26
2863 2906 6.152323 CACAAATTGATGAAACTCTGGAGGAT 59.848 38.462 0.00 0.00 0.00 3.24
2974 3017 2.888834 ACATTTTGTGGAGTGTTGGC 57.111 45.000 0.00 0.00 0.00 4.52
2988 3031 1.281867 TGTTGGCAGAGGAGGTATTGG 59.718 52.381 0.00 0.00 0.00 3.16
3052 3095 1.579698 CCTTCCTGCAGATGACATCG 58.420 55.000 17.39 6.39 0.00 3.84
3295 3339 4.346730 TCATGGTGGCAGATGATCTTTTT 58.653 39.130 5.25 0.00 0.00 1.94
3376 3420 0.744281 CGTTGGAAAGGGCACTTTGT 59.256 50.000 21.01 0.00 46.51 2.83
3380 3424 1.754226 TGGAAAGGGCACTTTGTTCAC 59.246 47.619 21.01 3.31 46.51 3.18
3677 3721 2.436417 GTGGTGCTTCTCATTTGGCTA 58.564 47.619 0.00 0.00 0.00 3.93
3908 3952 0.674581 TGCTGCCCTGAAGATTGTCG 60.675 55.000 0.00 0.00 0.00 4.35
3986 4030 1.340405 ACAAGGTGCTCCCTGCTATTG 60.340 52.381 3.27 2.48 45.47 1.90
4235 4440 8.437742 CAAATTTGTTTCTGAAATCATAGTGCC 58.562 33.333 10.15 0.00 0.00 5.01
4367 8539 4.578105 CAGAGTATCAAATCCAAGGCCTTC 59.422 45.833 17.29 0.00 37.82 3.46
4399 8571 3.581024 TTCTGTGGAATCATTGCAAGC 57.419 42.857 4.94 0.00 30.97 4.01
4454 8651 4.385825 GTGTTTCCACTGACAAGATACCA 58.614 43.478 0.00 0.00 38.61 3.25
4455 8652 4.213482 GTGTTTCCACTGACAAGATACCAC 59.787 45.833 0.00 0.00 38.61 4.16
4456 8653 3.695830 TTCCACTGACAAGATACCACC 57.304 47.619 0.00 0.00 0.00 4.61
4457 8654 2.615391 TCCACTGACAAGATACCACCA 58.385 47.619 0.00 0.00 0.00 4.17
4508 8706 9.197306 AGTCATATAGGTTACACTGTTCATACA 57.803 33.333 0.00 0.00 0.00 2.29
4536 8755 6.070824 TGCTTGAGTGATAGTAATCCTGTCAA 60.071 38.462 0.00 0.00 42.19 3.18
4537 8756 6.478344 GCTTGAGTGATAGTAATCCTGTCAAG 59.522 42.308 0.00 0.00 42.19 3.02
4728 8947 1.428219 CGACGTGGCTATCGACAGT 59.572 57.895 0.00 0.00 40.86 3.55
4788 9007 2.043852 ACGATCGAGGAGGCAGGT 60.044 61.111 24.34 0.00 0.00 4.00
4812 9031 4.752879 ACCGATGCAACCGACCCG 62.753 66.667 12.59 0.11 0.00 5.28
4836 9055 3.245754 GGAACAACGATTTGTACGACACA 59.754 43.478 0.00 0.00 45.69 3.72
4872 9091 1.141881 CGAGATGACCTTCACCGGG 59.858 63.158 6.32 0.00 0.00 5.73
4893 9112 1.490910 CCAGGAGGGTGGAAGATAACC 59.509 57.143 0.00 0.00 40.44 2.85
4973 9196 2.290071 TGATCCCTCCCGTGTTCTTTTC 60.290 50.000 0.00 0.00 0.00 2.29
5039 9268 6.282199 TGGAGATAGTTTGGTTAGTCTGAC 57.718 41.667 0.00 0.00 0.00 3.51
5043 9272 3.814005 AGTTTGGTTAGTCTGACGTGT 57.186 42.857 0.00 0.00 0.00 4.49
5044 9273 3.454375 AGTTTGGTTAGTCTGACGTGTG 58.546 45.455 0.00 0.00 0.00 3.82
5096 9325 5.468746 TGTTGTATTCGGATTATTGCTAGCC 59.531 40.000 13.29 0.00 0.00 3.93
5131 9360 5.500234 TGAGTTGGGGATAAGAGAAACATG 58.500 41.667 0.00 0.00 0.00 3.21
5139 9368 1.915141 AAGAGAAACATGGTGCTGGG 58.085 50.000 0.00 0.00 0.00 4.45
5167 9396 5.464168 CCGCTGAAATTGTCTTTTTGATCT 58.536 37.500 0.00 0.00 0.00 2.75
5170 9399 7.042523 CCGCTGAAATTGTCTTTTTGATCTTTT 60.043 33.333 0.00 0.00 0.00 2.27
5184 9413 6.563222 TTGATCTTTTACAAAACCCCTACG 57.437 37.500 0.00 0.00 0.00 3.51
5238 9467 0.686224 CTTGGGAAGGCATGGCAAAA 59.314 50.000 22.64 6.94 0.00 2.44
5240 9469 1.079888 GGGAAGGCATGGCAAAACG 60.080 57.895 22.64 0.00 0.00 3.60
5241 9470 1.665442 GGAAGGCATGGCAAAACGT 59.335 52.632 22.64 0.00 0.00 3.99
5318 9547 1.618343 ACGGGAAATCCTGGCAAAAAG 59.382 47.619 12.76 0.00 46.75 2.27
5319 9548 1.892474 CGGGAAATCCTGGCAAAAAGA 59.108 47.619 0.00 0.00 38.76 2.52
5320 9549 2.298729 CGGGAAATCCTGGCAAAAAGAA 59.701 45.455 0.00 0.00 38.76 2.52
5353 9582 1.551883 GGAAGGATTTGCCATGCTTGT 59.448 47.619 4.69 0.00 40.02 3.16
5360 9589 3.641437 TTTGCCATGCTTGTCAACTAC 57.359 42.857 0.00 0.00 0.00 2.73
5361 9590 2.566833 TGCCATGCTTGTCAACTACT 57.433 45.000 0.00 0.00 0.00 2.57
5362 9591 2.426522 TGCCATGCTTGTCAACTACTC 58.573 47.619 0.00 0.00 0.00 2.59
5364 9593 3.260632 TGCCATGCTTGTCAACTACTCTA 59.739 43.478 0.00 0.00 0.00 2.43
5365 9594 4.080919 TGCCATGCTTGTCAACTACTCTAT 60.081 41.667 0.00 0.00 0.00 1.98
5369 9598 6.036517 CCATGCTTGTCAACTACTCTATTCAC 59.963 42.308 0.00 0.00 0.00 3.18
5370 9599 6.346477 TGCTTGTCAACTACTCTATTCACT 57.654 37.500 0.00 0.00 0.00 3.41
5371 9600 6.159293 TGCTTGTCAACTACTCTATTCACTG 58.841 40.000 0.00 0.00 0.00 3.66
5432 9665 0.247736 CTCTGAGTGGGCGTTAGCTT 59.752 55.000 0.00 0.00 44.37 3.74
5440 9673 0.997196 GGGCGTTAGCTTGTTACGAG 59.003 55.000 12.53 0.00 44.37 4.18
5445 9678 3.836949 CGTTAGCTTGTTACGAGGGTTA 58.163 45.455 1.40 0.00 37.47 2.85
5446 9679 4.236935 CGTTAGCTTGTTACGAGGGTTAA 58.763 43.478 1.40 0.00 37.47 2.01
5500 9733 2.174854 ACCCCTATTGAATTTCCTCCCG 59.825 50.000 0.00 0.00 0.00 5.14
5505 9738 4.141711 CCTATTGAATTTCCTCCCGTCTCA 60.142 45.833 0.00 0.00 0.00 3.27
5519 9753 2.032030 CCGTCTCAATTGTTGTCACCAC 60.032 50.000 5.13 0.00 0.00 4.16
5522 9756 3.251004 GTCTCAATTGTTGTCACCACCTC 59.749 47.826 5.13 0.00 0.00 3.85
5526 9760 1.979855 TTGTTGTCACCACCTCCATG 58.020 50.000 0.00 0.00 0.00 3.66
5566 9800 1.293924 CCTCGTGCATCCAATGTCTC 58.706 55.000 0.00 0.00 0.00 3.36
5586 9820 3.295093 TCAAGCTAGGAGTCCATCTCTG 58.705 50.000 12.86 3.16 42.40 3.35
5594 9828 3.055240 AGGAGTCCATCTCTGAAAGCAAG 60.055 47.826 12.86 0.00 42.40 4.01
5604 9838 0.250901 TGAAAGCAAGGGCCTCAGTC 60.251 55.000 6.46 0.84 42.56 3.51
5626 9860 1.024271 CGGGGCATCATTGACGAATT 58.976 50.000 0.00 0.00 0.00 2.17
5648 9894 3.126858 TCAATTGCTCGTCTAACATTGCC 59.873 43.478 0.00 0.00 0.00 4.52
5651 9897 2.009051 TGCTCGTCTAACATTGCCATG 58.991 47.619 0.00 0.00 36.34 3.66
5670 9916 5.802465 CCATGATCAGCTATGATAACCACT 58.198 41.667 0.09 0.00 46.39 4.00
5671 9917 6.236409 CCATGATCAGCTATGATAACCACTT 58.764 40.000 0.09 0.00 46.39 3.16
5674 9920 6.519382 TGATCAGCTATGATAACCACTTCTG 58.481 40.000 0.00 0.00 46.39 3.02
5682 9928 3.451178 TGATAACCACTTCTGTAGCTCCC 59.549 47.826 0.00 0.00 0.00 4.30
5730 9976 1.880186 CGGTTTTTCCCATCCGTGG 59.120 57.895 0.00 0.00 45.61 4.94
5732 9978 1.182385 GGTTTTTCCCATCCGTGGCA 61.182 55.000 0.00 0.00 44.62 4.92
5737 9983 2.520020 CCCATCCGTGGCATGCAT 60.520 61.111 21.36 0.00 44.62 3.96
5742 9988 0.396139 ATCCGTGGCATGCATTTCCT 60.396 50.000 21.36 0.00 0.00 3.36
5882 10879 2.742372 CCTGGAAACTGGCGGTCG 60.742 66.667 0.00 0.00 42.94 4.79
5912 10909 3.434984 TGTTTTGACCTTTTGTGCAAAGC 59.565 39.130 0.00 0.00 40.75 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 108 9.933723 GTCCTACAAAGTTATACCTTCTACAAA 57.066 33.333 0.00 0.00 0.00 2.83
150 155 1.000607 CAATGCAGTCATGGCTATGGC 60.001 52.381 6.54 6.54 39.22 4.40
151 156 2.578786 TCAATGCAGTCATGGCTATGG 58.421 47.619 10.47 0.00 34.97 2.74
152 157 3.004419 CCTTCAATGCAGTCATGGCTATG 59.996 47.826 0.00 3.17 32.23 2.23
153 158 3.220110 CCTTCAATGCAGTCATGGCTAT 58.780 45.455 0.00 0.00 32.23 2.97
154 159 2.646930 CCTTCAATGCAGTCATGGCTA 58.353 47.619 0.00 0.00 32.23 3.93
155 160 1.471119 CCTTCAATGCAGTCATGGCT 58.529 50.000 0.00 0.00 32.23 4.75
165 170 5.813157 GTCTAGAGTCTAAACCCTTCAATGC 59.187 44.000 0.64 0.00 0.00 3.56
166 171 6.936279 TGTCTAGAGTCTAAACCCTTCAATG 58.064 40.000 1.14 0.00 0.00 2.82
207 212 1.413077 AGACGGGAAGCTTAGTATGCC 59.587 52.381 0.00 0.00 0.00 4.40
221 226 1.234615 ATGACGTGGCAAAAGACGGG 61.235 55.000 0.00 0.00 39.94 5.28
222 227 1.434555 TATGACGTGGCAAAAGACGG 58.565 50.000 0.00 0.00 39.94 4.79
225 230 1.810151 GGCTTATGACGTGGCAAAAGA 59.190 47.619 0.00 0.00 0.00 2.52
231 236 2.472909 GCCTGGCTTATGACGTGGC 61.473 63.158 12.43 0.00 36.57 5.01
240 245 1.820519 CAATCAAGCTTGCCTGGCTTA 59.179 47.619 21.99 7.06 46.59 3.09
244 249 0.971386 AACCAATCAAGCTTGCCTGG 59.029 50.000 30.25 30.25 36.37 4.45
281 286 4.586001 AGAATCTTGCCACAATGTGAGTTT 59.414 37.500 15.91 5.84 35.23 2.66
284 289 4.778534 AAGAATCTTGCCACAATGTGAG 57.221 40.909 15.91 4.55 35.23 3.51
286 291 4.240096 GGAAAGAATCTTGCCACAATGTG 58.760 43.478 15.12 6.37 0.00 3.21
295 300 3.119708 AGTTCGCATGGAAAGAATCTTGC 60.120 43.478 0.00 0.00 36.14 4.01
310 315 0.896940 AACGGAGGGAGTAGTTCGCA 60.897 55.000 0.00 0.00 41.01 5.10
317 322 4.098894 AGTATTTGGAAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
318 323 2.910977 AGTATTTGGAAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
319 324 3.629142 AGTATTTGGAAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
320 325 3.073356 ACAAGTATTTGGAAACGGAGGGA 59.927 43.478 2.81 0.00 38.66 4.20
321 326 3.418047 ACAAGTATTTGGAAACGGAGGG 58.582 45.455 2.81 0.00 38.66 4.30
322 327 4.324267 AGACAAGTATTTGGAAACGGAGG 58.676 43.478 2.81 0.00 38.66 4.30
323 328 5.941948 AAGACAAGTATTTGGAAACGGAG 57.058 39.130 2.81 0.00 38.66 4.63
324 329 6.059484 AGAAAGACAAGTATTTGGAAACGGA 58.941 36.000 2.81 0.00 38.66 4.69
325 330 6.313744 AGAAAGACAAGTATTTGGAAACGG 57.686 37.500 2.81 0.00 38.66 4.44
326 331 7.519002 CCTAGAAAGACAAGTATTTGGAAACG 58.481 38.462 2.81 0.00 38.66 3.60
327 332 7.040686 TGCCTAGAAAGACAAGTATTTGGAAAC 60.041 37.037 2.81 0.00 38.66 2.78
328 333 7.001674 TGCCTAGAAAGACAAGTATTTGGAAA 58.998 34.615 2.81 0.00 38.66 3.13
329 334 6.539173 TGCCTAGAAAGACAAGTATTTGGAA 58.461 36.000 2.81 0.00 38.66 3.53
330 335 6.121776 TGCCTAGAAAGACAAGTATTTGGA 57.878 37.500 2.81 0.00 38.66 3.53
331 336 7.396540 AATGCCTAGAAAGACAAGTATTTGG 57.603 36.000 2.81 0.00 38.66 3.28
332 337 8.514594 TGAAATGCCTAGAAAGACAAGTATTTG 58.485 33.333 0.00 0.00 40.24 2.32
333 338 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
334 339 8.635765 TTGAAATGCCTAGAAAGACAAGTATT 57.364 30.769 0.00 0.00 0.00 1.89
335 340 8.635765 TTTGAAATGCCTAGAAAGACAAGTAT 57.364 30.769 0.00 0.00 0.00 2.12
336 341 8.635765 ATTTGAAATGCCTAGAAAGACAAGTA 57.364 30.769 0.00 0.00 0.00 2.24
337 342 6.959639 TTTGAAATGCCTAGAAAGACAAGT 57.040 33.333 0.00 0.00 0.00 3.16
338 343 8.950210 TCTATTTGAAATGCCTAGAAAGACAAG 58.050 33.333 0.00 0.00 0.00 3.16
339 344 8.730680 GTCTATTTGAAATGCCTAGAAAGACAA 58.269 33.333 0.00 0.00 0.00 3.18
340 345 8.103305 AGTCTATTTGAAATGCCTAGAAAGACA 58.897 33.333 12.82 0.00 32.80 3.41
341 346 8.499403 AGTCTATTTGAAATGCCTAGAAAGAC 57.501 34.615 0.00 3.26 0.00 3.01
342 347 8.321353 TGAGTCTATTTGAAATGCCTAGAAAGA 58.679 33.333 0.00 0.00 0.00 2.52
343 348 8.498054 TGAGTCTATTTGAAATGCCTAGAAAG 57.502 34.615 0.00 0.00 0.00 2.62
344 349 8.862325 TTGAGTCTATTTGAAATGCCTAGAAA 57.138 30.769 0.00 0.00 0.00 2.52
349 354 8.993121 CGTATATTGAGTCTATTTGAAATGCCT 58.007 33.333 0.00 0.00 0.00 4.75
350 355 8.230486 CCGTATATTGAGTCTATTTGAAATGCC 58.770 37.037 0.00 0.00 0.00 4.40
351 356 8.988934 TCCGTATATTGAGTCTATTTGAAATGC 58.011 33.333 0.00 0.00 0.00 3.56
362 367 8.948145 GTCTACATACATCCGTATATTGAGTCT 58.052 37.037 0.00 0.00 36.11 3.24
363 368 8.727910 TGTCTACATACATCCGTATATTGAGTC 58.272 37.037 0.00 0.00 36.11 3.36
364 369 8.631480 TGTCTACATACATCCGTATATTGAGT 57.369 34.615 0.00 0.00 36.11 3.41
399 404 6.073765 ACGACACAAAATGAGTGAATCTACAC 60.074 38.462 0.00 0.00 40.16 2.90
400 405 5.989168 ACGACACAAAATGAGTGAATCTACA 59.011 36.000 0.00 0.00 40.16 2.74
401 406 6.467723 ACGACACAAAATGAGTGAATCTAC 57.532 37.500 0.00 0.00 40.16 2.59
402 407 7.817478 ACATACGACACAAAATGAGTGAATCTA 59.183 33.333 0.00 0.00 40.16 1.98
403 408 6.650807 ACATACGACACAAAATGAGTGAATCT 59.349 34.615 0.00 0.00 40.16 2.40
404 409 6.831769 ACATACGACACAAAATGAGTGAATC 58.168 36.000 0.00 0.00 40.16 2.52
405 410 6.801539 ACATACGACACAAAATGAGTGAAT 57.198 33.333 0.00 0.00 40.16 2.57
406 411 6.926826 ACTACATACGACACAAAATGAGTGAA 59.073 34.615 0.00 0.00 40.16 3.18
407 412 6.452242 ACTACATACGACACAAAATGAGTGA 58.548 36.000 0.00 0.00 40.16 3.41
408 413 6.364976 TGACTACATACGACACAAAATGAGTG 59.635 38.462 0.00 0.00 42.56 3.51
409 414 6.365247 GTGACTACATACGACACAAAATGAGT 59.635 38.462 0.00 0.00 0.00 3.41
410 415 6.586463 AGTGACTACATACGACACAAAATGAG 59.414 38.462 0.00 0.00 34.47 2.90
411 416 6.452242 AGTGACTACATACGACACAAAATGA 58.548 36.000 0.00 0.00 34.47 2.57
412 417 6.706055 AGTGACTACATACGACACAAAATG 57.294 37.500 0.00 0.00 34.47 2.32
413 418 6.704493 ACAAGTGACTACATACGACACAAAAT 59.296 34.615 0.00 0.00 34.47 1.82
414 419 6.044046 ACAAGTGACTACATACGACACAAAA 58.956 36.000 0.00 0.00 34.47 2.44
415 420 5.593968 ACAAGTGACTACATACGACACAAA 58.406 37.500 0.00 0.00 34.47 2.83
416 421 5.190992 ACAAGTGACTACATACGACACAA 57.809 39.130 0.00 0.00 34.47 3.33
417 422 4.841443 ACAAGTGACTACATACGACACA 57.159 40.909 0.00 0.00 34.47 3.72
418 423 7.627585 TTTAACAAGTGACTACATACGACAC 57.372 36.000 0.00 0.00 0.00 3.67
419 424 8.821147 ATTTTAACAAGTGACTACATACGACA 57.179 30.769 0.00 0.00 0.00 4.35
420 425 9.136952 AGATTTTAACAAGTGACTACATACGAC 57.863 33.333 0.00 0.00 0.00 4.34
421 426 9.350357 GAGATTTTAACAAGTGACTACATACGA 57.650 33.333 0.00 0.00 0.00 3.43
422 427 9.355215 AGAGATTTTAACAAGTGACTACATACG 57.645 33.333 0.00 0.00 0.00 3.06
440 445 8.315482 GGGAGTACTTGTCTTTCTAGAGATTTT 58.685 37.037 0.00 0.00 0.00 1.82
441 446 7.676468 AGGGAGTACTTGTCTTTCTAGAGATTT 59.324 37.037 0.00 0.00 0.00 2.17
442 447 7.186268 AGGGAGTACTTGTCTTTCTAGAGATT 58.814 38.462 0.00 0.00 0.00 2.40
443 448 6.737608 AGGGAGTACTTGTCTTTCTAGAGAT 58.262 40.000 0.00 0.00 0.00 2.75
444 449 6.142259 AGGGAGTACTTGTCTTTCTAGAGA 57.858 41.667 0.00 0.00 0.00 3.10
445 450 5.358725 GGAGGGAGTACTTGTCTTTCTAGAG 59.641 48.000 0.00 0.00 0.00 2.43
446 451 5.262804 GGAGGGAGTACTTGTCTTTCTAGA 58.737 45.833 0.00 0.00 0.00 2.43
447 452 4.096682 CGGAGGGAGTACTTGTCTTTCTAG 59.903 50.000 0.00 0.00 0.00 2.43
448 453 4.015084 CGGAGGGAGTACTTGTCTTTCTA 58.985 47.826 0.00 0.00 0.00 2.10
449 454 2.826725 CGGAGGGAGTACTTGTCTTTCT 59.173 50.000 0.00 0.00 0.00 2.52
450 455 2.561858 ACGGAGGGAGTACTTGTCTTTC 59.438 50.000 0.00 0.00 0.00 2.62
451 456 2.606378 ACGGAGGGAGTACTTGTCTTT 58.394 47.619 0.00 0.00 0.00 2.52
452 457 2.305858 ACGGAGGGAGTACTTGTCTT 57.694 50.000 0.00 0.00 0.00 3.01
453 458 2.169330 GAACGGAGGGAGTACTTGTCT 58.831 52.381 0.00 0.00 0.00 3.41
454 459 1.204231 GGAACGGAGGGAGTACTTGTC 59.796 57.143 0.00 0.00 0.00 3.18
455 460 1.264295 GGAACGGAGGGAGTACTTGT 58.736 55.000 0.00 0.00 0.00 3.16
456 461 1.263356 TGGAACGGAGGGAGTACTTG 58.737 55.000 0.00 0.00 0.00 3.16
457 462 2.019807 TTGGAACGGAGGGAGTACTT 57.980 50.000 0.00 0.00 0.00 2.24
458 463 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
459 464 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
460 465 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
461 466 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
462 467 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
463 468 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
464 469 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
465 470 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
466 471 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
467 472 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
468 473 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
469 474 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
470 475 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
471 476 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
472 477 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
473 478 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
474 479 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
475 480 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
476 481 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
477 482 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
478 483 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
479 484 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
480 485 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
481 486 7.506328 AAAGTTAGTACAAAGTTGGGTCATC 57.494 36.000 0.00 0.00 0.00 2.92
482 487 8.215736 ACTAAAGTTAGTACAAAGTTGGGTCAT 58.784 33.333 1.81 0.00 41.92 3.06
483 488 7.567458 ACTAAAGTTAGTACAAAGTTGGGTCA 58.433 34.615 1.81 0.00 41.92 4.02
484 489 9.716531 ATACTAAAGTTAGTACAAAGTTGGGTC 57.283 33.333 12.07 0.00 45.86 4.46
506 511 8.432805 CCAGAATAGATGACCCAACTTTATACT 58.567 37.037 0.00 0.00 0.00 2.12
507 512 8.429641 TCCAGAATAGATGACCCAACTTTATAC 58.570 37.037 0.00 0.00 0.00 1.47
508 513 8.561536 TCCAGAATAGATGACCCAACTTTATA 57.438 34.615 0.00 0.00 0.00 0.98
509 514 7.451731 TCCAGAATAGATGACCCAACTTTAT 57.548 36.000 0.00 0.00 0.00 1.40
510 515 6.884472 TCCAGAATAGATGACCCAACTTTA 57.116 37.500 0.00 0.00 0.00 1.85
511 516 5.779241 TCCAGAATAGATGACCCAACTTT 57.221 39.130 0.00 0.00 0.00 2.66
512 517 5.501156 GTTCCAGAATAGATGACCCAACTT 58.499 41.667 0.00 0.00 0.00 2.66
513 518 4.383118 CGTTCCAGAATAGATGACCCAACT 60.383 45.833 0.00 0.00 0.00 3.16
514 519 3.871594 CGTTCCAGAATAGATGACCCAAC 59.128 47.826 0.00 0.00 0.00 3.77
515 520 3.118408 CCGTTCCAGAATAGATGACCCAA 60.118 47.826 0.00 0.00 0.00 4.12
516 521 2.434336 CCGTTCCAGAATAGATGACCCA 59.566 50.000 0.00 0.00 0.00 4.51
517 522 2.698797 TCCGTTCCAGAATAGATGACCC 59.301 50.000 0.00 0.00 0.00 4.46
518 523 3.243907 CCTCCGTTCCAGAATAGATGACC 60.244 52.174 0.00 0.00 0.00 4.02
519 524 3.243907 CCCTCCGTTCCAGAATAGATGAC 60.244 52.174 0.00 0.00 0.00 3.06
520 525 2.965831 CCCTCCGTTCCAGAATAGATGA 59.034 50.000 0.00 0.00 0.00 2.92
521 526 2.965831 TCCCTCCGTTCCAGAATAGATG 59.034 50.000 0.00 0.00 0.00 2.90
522 527 3.235200 CTCCCTCCGTTCCAGAATAGAT 58.765 50.000 0.00 0.00 0.00 1.98
523 528 2.024273 ACTCCCTCCGTTCCAGAATAGA 60.024 50.000 0.00 0.00 0.00 1.98
524 529 2.389715 ACTCCCTCCGTTCCAGAATAG 58.610 52.381 0.00 0.00 0.00 1.73
525 530 2.544844 ACTCCCTCCGTTCCAGAATA 57.455 50.000 0.00 0.00 0.00 1.75
526 531 2.544844 TACTCCCTCCGTTCCAGAAT 57.455 50.000 0.00 0.00 0.00 2.40
527 532 2.544844 ATACTCCCTCCGTTCCAGAA 57.455 50.000 0.00 0.00 0.00 3.02
528 533 2.544844 AATACTCCCTCCGTTCCAGA 57.455 50.000 0.00 0.00 0.00 3.86
529 534 3.069729 CCTAAATACTCCCTCCGTTCCAG 59.930 52.174 0.00 0.00 0.00 3.86
530 535 3.036091 CCTAAATACTCCCTCCGTTCCA 58.964 50.000 0.00 0.00 0.00 3.53
531 536 3.303049 TCCTAAATACTCCCTCCGTTCC 58.697 50.000 0.00 0.00 0.00 3.62
532 537 4.691175 GTTCCTAAATACTCCCTCCGTTC 58.309 47.826 0.00 0.00 0.00 3.95
533 538 3.131755 CGTTCCTAAATACTCCCTCCGTT 59.868 47.826 0.00 0.00 0.00 4.44
534 539 2.692041 CGTTCCTAAATACTCCCTCCGT 59.308 50.000 0.00 0.00 0.00 4.69
535 540 2.035576 CCGTTCCTAAATACTCCCTCCG 59.964 54.545 0.00 0.00 0.00 4.63
536 541 3.303049 TCCGTTCCTAAATACTCCCTCC 58.697 50.000 0.00 0.00 0.00 4.30
537 542 3.321396 CCTCCGTTCCTAAATACTCCCTC 59.679 52.174 0.00 0.00 0.00 4.30
538 543 3.306613 CCTCCGTTCCTAAATACTCCCT 58.693 50.000 0.00 0.00 0.00 4.20
539 544 2.367894 CCCTCCGTTCCTAAATACTCCC 59.632 54.545 0.00 0.00 0.00 4.30
540 545 3.303049 TCCCTCCGTTCCTAAATACTCC 58.697 50.000 0.00 0.00 0.00 3.85
541 546 3.959449 ACTCCCTCCGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
542 547 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
543 548 7.614974 AGATATACTCCCTCCGTTCCTAAATAC 59.385 40.741 0.00 0.00 0.00 1.89
544 549 7.706674 AGATATACTCCCTCCGTTCCTAAATA 58.293 38.462 0.00 0.00 0.00 1.40
545 550 6.563163 AGATATACTCCCTCCGTTCCTAAAT 58.437 40.000 0.00 0.00 0.00 1.40
546 551 5.961897 AGATATACTCCCTCCGTTCCTAAA 58.038 41.667 0.00 0.00 0.00 1.85
547 552 5.074102 TGAGATATACTCCCTCCGTTCCTAA 59.926 44.000 0.00 0.00 44.34 2.69
548 553 4.600547 TGAGATATACTCCCTCCGTTCCTA 59.399 45.833 0.00 0.00 44.34 2.94
549 554 3.398292 TGAGATATACTCCCTCCGTTCCT 59.602 47.826 0.00 0.00 44.34 3.36
550 555 3.506844 GTGAGATATACTCCCTCCGTTCC 59.493 52.174 0.00 0.00 44.34 3.62
551 556 4.142790 TGTGAGATATACTCCCTCCGTTC 58.857 47.826 0.00 0.00 44.34 3.95
552 557 4.180377 TGTGAGATATACTCCCTCCGTT 57.820 45.455 0.00 0.00 44.34 4.44
553 558 3.878237 TGTGAGATATACTCCCTCCGT 57.122 47.619 0.00 0.00 44.34 4.69
554 559 4.082845 ACATGTGAGATATACTCCCTCCG 58.917 47.826 0.00 0.00 44.34 4.63
555 560 5.047660 GTGACATGTGAGATATACTCCCTCC 60.048 48.000 1.15 0.00 44.34 4.30
556 561 5.047660 GGTGACATGTGAGATATACTCCCTC 60.048 48.000 1.15 0.00 44.34 4.30
557 562 4.835615 GGTGACATGTGAGATATACTCCCT 59.164 45.833 1.15 0.00 44.34 4.20
558 563 4.321304 CGGTGACATGTGAGATATACTCCC 60.321 50.000 1.15 0.00 44.34 4.30
559 564 4.519350 TCGGTGACATGTGAGATATACTCC 59.481 45.833 1.15 0.00 44.34 3.85
560 565 5.239744 AGTCGGTGACATGTGAGATATACTC 59.760 44.000 1.15 0.00 39.31 2.59
561 566 5.133941 AGTCGGTGACATGTGAGATATACT 58.866 41.667 1.15 0.00 34.60 2.12
562 567 5.008712 TGAGTCGGTGACATGTGAGATATAC 59.991 44.000 1.15 0.00 34.60 1.47
567 572 1.616159 TGAGTCGGTGACATGTGAGA 58.384 50.000 1.15 0.00 34.60 3.27
582 587 3.307762 GCTTCCCCACACTTTCTATGAGT 60.308 47.826 0.00 0.00 0.00 3.41
589 594 3.055094 TGAGATAGCTTCCCCACACTTTC 60.055 47.826 0.00 0.00 0.00 2.62
599 604 2.289002 CGCCACATTTGAGATAGCTTCC 59.711 50.000 0.00 0.00 0.00 3.46
600 605 2.939103 ACGCCACATTTGAGATAGCTTC 59.061 45.455 0.00 0.00 0.00 3.86
603 608 1.258982 CGACGCCACATTTGAGATAGC 59.741 52.381 0.00 0.00 0.00 2.97
609 614 2.550180 TCAAAATCGACGCCACATTTGA 59.450 40.909 0.00 0.16 35.20 2.69
616 621 2.673114 GCGGTCAAAATCGACGCCA 61.673 57.895 3.22 0.00 36.73 5.69
628 633 1.350071 TGTTTAGGGTTAGGCGGTCA 58.650 50.000 0.00 0.00 0.00 4.02
661 666 9.349713 TGATCTACCTTTTTGTCACACTTATTT 57.650 29.630 0.00 0.00 0.00 1.40
662 667 8.918202 TGATCTACCTTTTTGTCACACTTATT 57.082 30.769 0.00 0.00 0.00 1.40
663 668 8.918202 TTGATCTACCTTTTTGTCACACTTAT 57.082 30.769 0.00 0.00 0.00 1.73
664 669 8.617809 GTTTGATCTACCTTTTTGTCACACTTA 58.382 33.333 0.00 0.00 0.00 2.24
672 677 6.183360 TGCCATTGTTTGATCTACCTTTTTGT 60.183 34.615 0.00 0.00 0.00 2.83
683 688 6.223120 AGTACCTTTTTGCCATTGTTTGATC 58.777 36.000 0.00 0.00 0.00 2.92
685 690 5.362430 AGAGTACCTTTTTGCCATTGTTTGA 59.638 36.000 0.00 0.00 0.00 2.69
693 698 6.547880 TGTTTGATAAGAGTACCTTTTTGCCA 59.452 34.615 2.53 0.00 36.34 4.92
695 700 8.915654 CATTGTTTGATAAGAGTACCTTTTTGC 58.084 33.333 2.53 0.00 36.34 3.68
698 703 9.349713 TGTCATTGTTTGATAAGAGTACCTTTT 57.650 29.630 2.53 0.00 36.54 2.27
699 704 8.918202 TGTCATTGTTTGATAAGAGTACCTTT 57.082 30.769 2.53 0.00 36.54 3.11
700 705 8.918202 TTGTCATTGTTTGATAAGAGTACCTT 57.082 30.769 0.00 0.00 36.54 3.50
701 706 8.918202 TTTGTCATTGTTTGATAAGAGTACCT 57.082 30.769 0.00 0.00 36.87 3.08
798 803 0.954452 CCGCTCTGCCTGAACTTTTT 59.046 50.000 0.00 0.00 0.00 1.94
814 819 2.045926 ACTGATGGTGAAGGCCGC 60.046 61.111 0.00 0.00 0.00 6.53
824 829 1.898472 ACTGAGGTGACTGACTGATGG 59.102 52.381 0.00 0.00 44.43 3.51
832 837 1.373497 GGACGCACTGAGGTGACTG 60.373 63.158 0.00 0.00 45.61 3.51
833 838 2.920645 CGGACGCACTGAGGTGACT 61.921 63.158 0.00 0.00 45.61 3.41
837 842 0.892358 TAGTTCGGACGCACTGAGGT 60.892 55.000 7.25 0.00 35.15 3.85
839 844 0.522180 ACTAGTTCGGACGCACTGAG 59.478 55.000 7.25 4.06 35.15 3.35
840 845 1.736126 CTACTAGTTCGGACGCACTGA 59.264 52.381 0.00 0.00 0.00 3.41
842 847 1.818642 ACTACTAGTTCGGACGCACT 58.181 50.000 0.00 2.27 0.00 4.40
843 848 2.675348 ACTACTACTAGTTCGGACGCAC 59.325 50.000 0.00 0.00 27.62 5.34
844 849 2.977914 ACTACTACTAGTTCGGACGCA 58.022 47.619 0.00 0.00 27.62 5.24
845 850 3.865745 TGTACTACTACTAGTTCGGACGC 59.134 47.826 0.00 0.00 34.79 5.19
846 851 5.501574 GCTTGTACTACTACTAGTTCGGACG 60.502 48.000 0.00 0.00 34.79 4.79
847 852 5.501574 CGCTTGTACTACTACTAGTTCGGAC 60.502 48.000 0.00 0.00 34.79 4.79
848 853 4.568359 CGCTTGTACTACTACTAGTTCGGA 59.432 45.833 0.00 0.00 34.79 4.55
849 854 4.784710 GCGCTTGTACTACTACTAGTTCGG 60.785 50.000 0.00 0.00 34.79 4.30
850 855 4.201753 TGCGCTTGTACTACTACTAGTTCG 60.202 45.833 9.73 0.00 34.79 3.95
851 856 5.227238 TGCGCTTGTACTACTACTAGTTC 57.773 43.478 9.73 0.00 34.79 3.01
852 857 5.633830 TTGCGCTTGTACTACTACTAGTT 57.366 39.130 9.73 0.00 34.79 2.24
853 858 5.633830 TTTGCGCTTGTACTACTACTAGT 57.366 39.130 9.73 0.00 37.04 2.57
854 859 5.860182 TGTTTTGCGCTTGTACTACTACTAG 59.140 40.000 9.73 0.00 0.00 2.57
855 860 5.771469 TGTTTTGCGCTTGTACTACTACTA 58.229 37.500 9.73 0.00 0.00 1.82
856 861 4.624015 TGTTTTGCGCTTGTACTACTACT 58.376 39.130 9.73 0.00 0.00 2.57
857 862 4.977741 TGTTTTGCGCTTGTACTACTAC 57.022 40.909 9.73 0.00 0.00 2.73
858 863 4.084952 CGTTGTTTTGCGCTTGTACTACTA 60.085 41.667 9.73 0.00 0.00 1.82
859 864 3.302870 CGTTGTTTTGCGCTTGTACTACT 60.303 43.478 9.73 0.00 0.00 2.57
860 865 2.962191 CGTTGTTTTGCGCTTGTACTAC 59.038 45.455 9.73 7.83 0.00 2.73
861 866 2.864946 TCGTTGTTTTGCGCTTGTACTA 59.135 40.909 9.73 0.00 0.00 1.82
862 867 1.666700 TCGTTGTTTTGCGCTTGTACT 59.333 42.857 9.73 0.00 0.00 2.73
863 868 1.771291 GTCGTTGTTTTGCGCTTGTAC 59.229 47.619 9.73 2.11 0.00 2.90
864 869 1.397343 TGTCGTTGTTTTGCGCTTGTA 59.603 42.857 9.73 0.00 0.00 2.41
865 870 0.169230 TGTCGTTGTTTTGCGCTTGT 59.831 45.000 9.73 0.00 0.00 3.16
866 871 0.839477 CTGTCGTTGTTTTGCGCTTG 59.161 50.000 9.73 0.00 0.00 4.01
884 889 4.406173 CGCGTCTGCTGTCGACCT 62.406 66.667 14.12 0.00 39.65 3.85
1008 1017 2.743928 GCGAGCAGGTTGTGGAGG 60.744 66.667 0.00 0.00 0.00 4.30
1243 1258 2.726351 CGACCTGGAGGGGAAGAGC 61.726 68.421 0.00 0.00 40.27 4.09
1245 1260 1.305046 GTCGACCTGGAGGGGAAGA 60.305 63.158 3.51 0.00 40.27 2.87
1303 1318 4.820897 TCAGTTAAATCACACGAGATGCT 58.179 39.130 0.00 0.00 0.00 3.79
1339 1354 9.866798 TGATGCATCTTTATCTATCAGATGTAC 57.133 33.333 26.32 0.00 44.00 2.90
1341 1356 8.595421 ACTGATGCATCTTTATCTATCAGATGT 58.405 33.333 26.32 0.00 44.00 3.06
1343 1358 9.038072 AGACTGATGCATCTTTATCTATCAGAT 57.962 33.333 26.32 5.92 42.38 2.90
1344 1359 8.419922 AGACTGATGCATCTTTATCTATCAGA 57.580 34.615 26.32 1.49 42.38 3.27
1351 1369 6.904011 CGTTTCAAGACTGATGCATCTTTATC 59.096 38.462 26.32 17.20 32.77 1.75
1361 1379 3.748048 ACCATCACGTTTCAAGACTGATG 59.252 43.478 0.00 0.00 36.29 3.07
1365 1383 6.262273 ACAAATTACCATCACGTTTCAAGACT 59.738 34.615 0.00 0.00 0.00 3.24
1399 1417 0.877071 CAATGCTGGATGATACGGCC 59.123 55.000 5.92 0.00 39.46 6.13
1458 1476 2.672714 TCGAGTGAGAAATTGGTCACG 58.327 47.619 12.49 5.00 46.43 4.35
1459 1477 3.619038 GGATCGAGTGAGAAATTGGTCAC 59.381 47.826 11.00 11.00 42.95 3.67
1460 1478 3.369471 GGGATCGAGTGAGAAATTGGTCA 60.369 47.826 0.00 0.00 0.00 4.02
1461 1479 3.198872 GGGATCGAGTGAGAAATTGGTC 58.801 50.000 0.00 0.00 0.00 4.02
1462 1480 2.571653 TGGGATCGAGTGAGAAATTGGT 59.428 45.455 0.00 0.00 0.00 3.67
1463 1481 3.266510 TGGGATCGAGTGAGAAATTGG 57.733 47.619 0.00 0.00 0.00 3.16
1464 1482 6.925610 TTTATGGGATCGAGTGAGAAATTG 57.074 37.500 0.00 0.00 0.00 2.32
1465 1483 7.938140 TTTTTATGGGATCGAGTGAGAAATT 57.062 32.000 0.00 0.00 0.00 1.82
1466 1484 9.799106 ATATTTTTATGGGATCGAGTGAGAAAT 57.201 29.630 0.00 0.00 0.00 2.17
1467 1485 9.056005 CATATTTTTATGGGATCGAGTGAGAAA 57.944 33.333 0.00 0.00 0.00 2.52
1468 1486 8.428852 TCATATTTTTATGGGATCGAGTGAGAA 58.571 33.333 0.00 0.00 0.00 2.87
1473 1491 6.837312 TGGTCATATTTTTATGGGATCGAGT 58.163 36.000 0.00 0.00 0.00 4.18
1521 1540 5.486735 AAATGTTTGAGCAATTCCATCCA 57.513 34.783 0.00 0.00 0.00 3.41
1524 1543 7.884354 ACCAATTAAATGTTTGAGCAATTCCAT 59.116 29.630 0.00 0.00 0.00 3.41
1535 1554 8.844244 TCATTTCCCAAACCAATTAAATGTTTG 58.156 29.630 15.48 15.48 45.18 2.93
1536 1555 8.986929 TCATTTCCCAAACCAATTAAATGTTT 57.013 26.923 0.00 0.00 36.31 2.83
1550 1574 2.896685 AGCGAACCAATCATTTCCCAAA 59.103 40.909 0.00 0.00 0.00 3.28
1595 1619 2.817423 GCTGAGGAAATGCGGCTCG 61.817 63.158 0.00 0.00 33.67 5.03
1672 1696 1.455383 GCCAACAAGGGTGTCTGTGG 61.455 60.000 0.00 0.00 36.80 4.17
1679 1703 3.353836 CGACGGCCAACAAGGGTG 61.354 66.667 2.24 0.00 38.09 4.61
1710 1734 5.124457 GGTTTGTGAGAGTATCATGTGCAAT 59.876 40.000 0.00 0.00 40.92 3.56
1985 2009 1.218316 CGGTCCTCCAGTAAGTGCC 59.782 63.158 0.00 0.00 0.00 5.01
2139 2163 3.181480 GGTAAAAACAGCTGACCTGCAAA 60.181 43.478 23.35 0.00 45.78 3.68
2235 2263 6.627243 TGCTTTAGTGATCTAAACGCTCTTA 58.373 36.000 15.47 0.00 40.05 2.10
2253 2281 5.474578 AGAGTGTTCAGATCACTGCTTTA 57.525 39.130 17.36 0.00 44.68 1.85
2254 2282 4.348863 AGAGTGTTCAGATCACTGCTTT 57.651 40.909 17.36 0.00 44.68 3.51
2255 2283 4.348863 AAGAGTGTTCAGATCACTGCTT 57.651 40.909 17.36 15.58 44.68 3.91
2257 2285 8.430801 AAATATAAGAGTGTTCAGATCACTGC 57.569 34.615 17.36 9.82 44.68 4.40
2258 2286 9.814899 AGAAATATAAGAGTGTTCAGATCACTG 57.185 33.333 17.36 0.00 44.68 3.66
2271 2301 9.495382 ACTCCCTCTGTAAAGAAATATAAGAGT 57.505 33.333 0.00 0.00 0.00 3.24
2444 2476 7.555914 TGCTGCATCTTATGTTTACCATAAAGA 59.444 33.333 0.00 0.00 43.64 2.52
2446 2478 7.416213 GGTGCTGCATCTTATGTTTACCATAAA 60.416 37.037 5.27 0.00 43.64 1.40
2539 2574 3.342926 AGGATCTGTCCCTGCTCTTAT 57.657 47.619 0.00 0.00 46.34 1.73
2666 2707 9.231297 CCAATATCGACCCAGTGAAAATATAAT 57.769 33.333 0.00 0.00 0.00 1.28
2831 2874 6.263842 AGAGTTTCATCAATTTGTGAGAGCAA 59.736 34.615 0.00 0.00 40.43 3.91
2836 2879 6.349115 CCTCCAGAGTTTCATCAATTTGTGAG 60.349 42.308 0.00 0.00 40.43 3.51
2974 3017 4.383118 CCAACAGTACCAATACCTCCTCTG 60.383 50.000 0.00 0.00 30.88 3.35
2988 3031 3.933332 CGAAAATCCTCCTCCAACAGTAC 59.067 47.826 0.00 0.00 0.00 2.73
3052 3095 1.173913 AATTACAAACCTGCTCCGCC 58.826 50.000 0.00 0.00 0.00 6.13
3108 3151 5.242393 ACATTCTCAAAACATTGCTACAGCT 59.758 36.000 2.44 0.00 42.66 4.24
3153 3197 9.519191 TTTTTGAGAAGAAATCCATCTGTGATA 57.481 29.630 0.00 0.00 0.00 2.15
3172 3216 5.569413 GGTATGCTATTCGGTGTTTTTGAG 58.431 41.667 0.00 0.00 0.00 3.02
3295 3339 3.558931 TTGAACTTCTGGAGCTGTTCA 57.441 42.857 10.13 10.13 44.41 3.18
3380 3424 2.012673 GCTAATGTCTCCCACAAGCAG 58.987 52.381 0.00 0.00 38.97 4.24
3816 3860 1.704628 TGACAGATTCCTCAAGGCCAA 59.295 47.619 5.01 0.00 34.44 4.52
3986 4030 0.179062 ATGGACTCATGCTCGCTTCC 60.179 55.000 0.00 0.00 31.34 3.46
4399 8571 2.798145 GCCAAAGTTTTGAACCTCACCG 60.798 50.000 6.18 0.00 40.55 4.94
4454 8651 0.908910 TGTCTCCGGTTGCATATGGT 59.091 50.000 0.00 0.00 0.00 3.55
4455 8652 1.134401 AGTGTCTCCGGTTGCATATGG 60.134 52.381 0.00 0.00 0.00 2.74
4456 8653 2.315925 AGTGTCTCCGGTTGCATATG 57.684 50.000 0.00 0.00 0.00 1.78
4457 8654 2.236146 TGAAGTGTCTCCGGTTGCATAT 59.764 45.455 0.00 0.00 0.00 1.78
4507 8705 8.093307 ACAGGATTACTATCACTCAAGCATATG 58.907 37.037 0.00 0.00 32.09 1.78
4508 8706 8.200024 ACAGGATTACTATCACTCAAGCATAT 57.800 34.615 0.00 0.00 32.09 1.78
4512 8710 5.907207 TGACAGGATTACTATCACTCAAGC 58.093 41.667 0.00 0.00 32.09 4.01
4536 8755 7.442666 GGAAATAACTCTCGAGAAATTATGCCT 59.557 37.037 22.89 14.85 0.00 4.75
4537 8756 7.226720 TGGAAATAACTCTCGAGAAATTATGCC 59.773 37.037 22.89 23.71 0.00 4.40
4728 8947 3.202548 GTCCAGGGAGACGGTGATA 57.797 57.895 0.00 0.00 0.00 2.15
4788 9007 1.375908 GGTTGCATCGGTGAGCTGA 60.376 57.895 0.00 0.00 0.00 4.26
4812 9031 3.737266 TGTCGTACAAATCGTTGTTCCTC 59.263 43.478 0.00 0.00 46.01 3.71
4872 9091 1.134068 GTTATCTTCCACCCTCCTGGC 60.134 57.143 0.00 0.00 37.83 4.85
4893 9112 4.735132 TTGAGGACCGCGCCTTCG 62.735 66.667 6.73 0.00 38.73 3.79
4973 9196 4.804139 CCTAGACTGCTTATTTACACACCG 59.196 45.833 0.00 0.00 0.00 4.94
5039 9268 1.922903 GCTCATCGCTGATCACACG 59.077 57.895 6.99 6.99 35.14 4.49
5096 9325 4.033709 TCCCCAACTCAAGGATCTTCTAG 58.966 47.826 0.00 0.00 0.00 2.43
5139 9368 2.422276 AGACAATTTCAGCGGCAAAC 57.578 45.000 1.45 0.00 0.00 2.93
5206 9435 1.672356 CCCAAGGAAGGTCAGCACG 60.672 63.158 0.00 0.00 0.00 5.34
5273 9502 6.877322 TGCTTACTAACTAAGTTTGTCATCCC 59.123 38.462 0.00 0.00 39.80 3.85
5326 9555 1.915489 TGGCAAATCCTTCCAGCTCTA 59.085 47.619 0.00 0.00 35.26 2.43
5327 9556 0.700564 TGGCAAATCCTTCCAGCTCT 59.299 50.000 0.00 0.00 35.26 4.09
5330 9559 0.179092 GCATGGCAAATCCTTCCAGC 60.179 55.000 0.00 0.00 35.26 4.85
5332 9561 1.551430 CAAGCATGGCAAATCCTTCCA 59.449 47.619 0.00 0.00 35.26 3.53
5353 9582 7.284919 TGTTGTCAGTGAATAGAGTAGTTGA 57.715 36.000 0.00 0.00 0.00 3.18
5360 9589 7.697691 ACAGTTTTTGTTGTCAGTGAATAGAG 58.302 34.615 0.00 0.00 36.31 2.43
5361 9590 7.335673 TGACAGTTTTTGTTGTCAGTGAATAGA 59.664 33.333 0.00 0.00 46.27 1.98
5362 9591 7.471721 TGACAGTTTTTGTTGTCAGTGAATAG 58.528 34.615 0.00 0.00 46.27 1.73
5364 9593 6.266168 TGACAGTTTTTGTTGTCAGTGAAT 57.734 33.333 0.00 0.00 46.27 2.57
5365 9594 5.697473 TGACAGTTTTTGTTGTCAGTGAA 57.303 34.783 0.00 0.00 46.27 3.18
5371 9600 5.776519 TTTGCATGACAGTTTTTGTTGTC 57.223 34.783 0.00 0.00 41.05 3.18
5424 9657 2.358939 ACCCTCGTAACAAGCTAACG 57.641 50.000 0.00 0.00 37.96 3.18
5465 9698 9.936329 ATTCAATAGGGGTCACAACTATTTATT 57.064 29.630 1.56 0.00 35.77 1.40
5519 9753 1.022735 GCAGTCTGATTGCATGGAGG 58.977 55.000 18.74 0.00 41.17 4.30
5526 9760 2.099141 TACTGGTGCAGTCTGATTGC 57.901 50.000 17.11 17.11 41.21 3.56
5566 9800 3.295093 TCAGAGATGGACTCCTAGCTTG 58.705 50.000 0.00 0.00 45.96 4.01
5586 9820 1.301677 CGACTGAGGCCCTTGCTTTC 61.302 60.000 0.00 0.00 37.74 2.62
5604 9838 2.525248 CGTCAATGATGCCCCGACG 61.525 63.158 0.00 0.00 42.79 5.12
5626 9860 3.126858 GGCAATGTTAGACGAGCAATTGA 59.873 43.478 10.34 0.00 0.00 2.57
5648 9894 7.117956 CAGAAGTGGTTATCATAGCTGATCATG 59.882 40.741 0.00 0.00 41.29 3.07
5651 9897 6.520272 ACAGAAGTGGTTATCATAGCTGATC 58.480 40.000 0.00 0.00 41.29 2.92
5682 9928 0.592637 TTGTTGCAATGACAGAGCGG 59.407 50.000 0.59 0.00 0.00 5.52
5730 9976 1.475280 TCAAGCTCAGGAAATGCATGC 59.525 47.619 11.82 11.82 0.00 4.06
5732 9978 5.416271 AAAATCAAGCTCAGGAAATGCAT 57.584 34.783 0.00 0.00 0.00 3.96
5808 10054 4.053469 TGCGTGAATTATAGCAGTGCTA 57.947 40.909 26.38 26.38 45.55 3.49
5809 10055 2.905075 TGCGTGAATTATAGCAGTGCT 58.095 42.857 23.44 23.44 43.41 4.40
5868 10865 0.879090 AAATTCGACCGCCAGTTTCC 59.121 50.000 0.00 0.00 0.00 3.13
5877 10874 4.212636 AGGTCAAAACACTAAATTCGACCG 59.787 41.667 0.00 0.00 45.05 4.79
5879 10876 7.486870 ACAAAAGGTCAAAACACTAAATTCGAC 59.513 33.333 0.00 0.00 0.00 4.20
5882 10879 7.064016 TGCACAAAAGGTCAAAACACTAAATTC 59.936 33.333 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.