Multiple sequence alignment - TraesCS6B01G085100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G085100 chr6B 100.000 3777 0 0 1 3777 62001109 62004885 0.000000e+00 6975.0
1 TraesCS6B01G085100 chr6B 82.905 1556 205 30 110 1644 95819067 95820582 0.000000e+00 1343.0
2 TraesCS6B01G085100 chr6B 81.274 1036 150 23 61 1086 95722807 95723808 0.000000e+00 798.0
3 TraesCS6B01G085100 chr6B 86.190 630 68 13 1092 1719 95755896 95756508 0.000000e+00 664.0
4 TraesCS6B01G085100 chr6B 86.907 443 46 8 1998 2432 95756791 95757229 1.580000e-133 486.0
5 TraesCS6B01G085100 chr6B 84.750 400 49 6 97 488 61918590 61918985 1.270000e-104 390.0
6 TraesCS6B01G085100 chr6B 84.034 238 24 7 3542 3777 21085545 21085320 2.280000e-52 217.0
7 TraesCS6B01G085100 chr6B 75.523 478 63 22 2913 3346 95719251 95719718 6.440000e-43 185.0
8 TraesCS6B01G085100 chr6B 79.061 277 39 10 2137 2399 95821278 95821549 5.020000e-39 172.0
9 TraesCS6B01G085100 chr6B 100.000 28 0 0 3482 3509 344334608 344334581 7.000000e-03 52.8
10 TraesCS6B01G085100 chr6B 83.929 56 7 2 3456 3509 684643341 684643396 7.000000e-03 52.8
11 TraesCS6B01G085100 chr6D 94.151 1590 71 11 143 1723 28683612 28682036 0.000000e+00 2401.0
12 TraesCS6B01G085100 chr6D 84.695 1555 171 37 115 1644 41545389 41543877 0.000000e+00 1491.0
13 TraesCS6B01G085100 chr6D 84.481 1205 150 22 77 1268 41596569 41595389 0.000000e+00 1155.0
14 TraesCS6B01G085100 chr6D 89.281 793 52 15 2585 3356 28680606 28679826 0.000000e+00 963.0
15 TraesCS6B01G085100 chr6D 91.807 476 22 4 1720 2195 28682006 28681548 0.000000e+00 647.0
16 TraesCS6B01G085100 chr6D 85.331 559 52 12 1720 2261 41582610 41582065 5.510000e-153 551.0
17 TraesCS6B01G085100 chr6D 91.990 387 17 6 2193 2570 28681314 28680933 7.180000e-147 531.0
18 TraesCS6B01G085100 chr6D 86.463 458 46 9 1265 1722 41583082 41582641 4.380000e-134 488.0
19 TraesCS6B01G085100 chr6D 92.797 236 13 4 3543 3777 86941976 86941744 4.670000e-89 339.0
20 TraesCS6B01G085100 chr6D 76.321 511 54 32 2089 2567 41543477 41543002 1.060000e-50 211.0
21 TraesCS6B01G085100 chr6A 92.539 1662 80 25 64 1722 33967032 33968652 0.000000e+00 2342.0
22 TraesCS6B01G085100 chr6A 86.008 1458 168 16 116 1559 52118816 52117381 0.000000e+00 1530.0
23 TraesCS6B01G085100 chr6A 83.812 1532 182 28 126 1644 52039104 52037626 0.000000e+00 1395.0
24 TraesCS6B01G085100 chr6A 93.264 861 36 10 1720 2570 33968690 33969538 0.000000e+00 1249.0
25 TraesCS6B01G085100 chr6A 87.640 801 69 15 2574 3356 33969993 33970781 0.000000e+00 904.0
26 TraesCS6B01G085100 chr6A 80.776 541 64 20 1888 2399 52037434 52036905 1.650000e-103 387.0
27 TraesCS6B01G085100 chr6A 82.171 129 11 2 3098 3226 52116121 52116005 2.400000e-17 100.0
28 TraesCS6B01G085100 chr6A 83.929 56 7 2 3456 3509 98466857 98466912 7.000000e-03 52.8
29 TraesCS6B01G085100 chr4D 75.290 1206 237 43 205 1390 73997964 73996800 1.550000e-143 520.0
30 TraesCS6B01G085100 chr4D 100.000 28 0 0 3482 3509 214587130 214587103 7.000000e-03 52.8
31 TraesCS6B01G085100 chr4D 100.000 28 0 0 3482 3509 294591341 294591314 7.000000e-03 52.8
32 TraesCS6B01G085100 chr4B 91.057 246 16 6 3535 3777 376960631 376960873 1.010000e-85 327.0
33 TraesCS6B01G085100 chr4B 86.538 104 9 3 3676 3777 587753142 587753042 3.990000e-20 110.0
34 TraesCS6B01G085100 chr5D 89.474 228 20 3 3545 3770 447422217 447421992 6.170000e-73 285.0
35 TraesCS6B01G085100 chr4A 87.764 237 22 5 3545 3777 676215286 676215053 1.730000e-68 270.0
36 TraesCS6B01G085100 chr3B 88.889 207 20 2 3573 3777 708007264 708007469 6.260000e-63 252.0
37 TraesCS6B01G085100 chr3B 84.483 58 5 4 3455 3509 632040081 632040025 2.000000e-03 54.7
38 TraesCS6B01G085100 chr7D 87.864 206 22 3 3573 3777 610588562 610588359 4.880000e-59 239.0
39 TraesCS6B01G085100 chr2B 84.454 238 23 7 3542 3777 93397726 93397951 4.910000e-54 222.0
40 TraesCS6B01G085100 chr2B 83.929 56 7 2 3456 3509 367032445 367032500 7.000000e-03 52.8
41 TraesCS6B01G085100 chr5B 100.000 29 0 0 3481 3509 616815373 616815401 2.000000e-03 54.7
42 TraesCS6B01G085100 chr1D 100.000 28 0 0 3482 3509 146526930 146526903 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G085100 chr6B 62001109 62004885 3776 False 6975.000000 6975 100.000000 1 3777 1 chr6B.!!$F2 3776
1 TraesCS6B01G085100 chr6B 95819067 95821549 2482 False 757.500000 1343 80.983000 110 2399 2 chr6B.!!$F6 2289
2 TraesCS6B01G085100 chr6B 95755896 95757229 1333 False 575.000000 664 86.548500 1092 2432 2 chr6B.!!$F5 1340
3 TraesCS6B01G085100 chr6B 95719251 95723808 4557 False 491.500000 798 78.398500 61 3346 2 chr6B.!!$F4 3285
4 TraesCS6B01G085100 chr6D 41595389 41596569 1180 True 1155.000000 1155 84.481000 77 1268 1 chr6D.!!$R1 1191
5 TraesCS6B01G085100 chr6D 28679826 28683612 3786 True 1135.500000 2401 91.807250 143 3356 4 chr6D.!!$R3 3213
6 TraesCS6B01G085100 chr6D 41543002 41545389 2387 True 851.000000 1491 80.508000 115 2567 2 chr6D.!!$R4 2452
7 TraesCS6B01G085100 chr6D 41582065 41583082 1017 True 519.500000 551 85.897000 1265 2261 2 chr6D.!!$R5 996
8 TraesCS6B01G085100 chr6A 33967032 33970781 3749 False 1498.333333 2342 91.147667 64 3356 3 chr6A.!!$F2 3292
9 TraesCS6B01G085100 chr6A 52036905 52039104 2199 True 891.000000 1395 82.294000 126 2399 2 chr6A.!!$R1 2273
10 TraesCS6B01G085100 chr6A 52116005 52118816 2811 True 815.000000 1530 84.089500 116 3226 2 chr6A.!!$R2 3110
11 TraesCS6B01G085100 chr4D 73996800 73997964 1164 True 520.000000 520 75.290000 205 1390 1 chr4D.!!$R1 1185

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
24 25 0.031721 CCCGCTATAGTCGAACCCAC 59.968 60.0 15.26 0.0 0.00 4.61 F
38 39 0.110486 ACCCACCAACCAAGTAGCAG 59.890 55.0 0.00 0.0 0.00 4.24 F
125 3622 0.761323 GACCCCTAGCTCCTCTTCCC 60.761 65.0 0.00 0.0 0.00 3.97 F
1004 4531 0.902531 GGTTTCGTCTCCCTCATGGA 59.097 55.0 0.00 0.0 42.41 3.41 F
2446 6821 1.009829 GCCTTTGATGGACTAGCACG 58.990 55.0 0.00 0.0 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1826 5718 0.465097 AACAGCAACAGCAGCAGACT 60.465 50.000 0.00 0.00 0.00 3.24 R
1838 5730 6.257630 GTGCCAAATCTAAAAGAAAACAGCAA 59.742 34.615 0.00 0.00 0.00 3.91 R
2085 5978 4.273148 AGACCAACACAGAACCTGATAC 57.727 45.455 0.45 0.00 35.18 2.24 R
2713 7549 0.453282 CTGAAAAGACGGCATGCACG 60.453 55.000 21.36 21.64 37.36 5.34 R
3404 8379 0.040067 CAAAGAGGCAGCCGTTGTTC 60.040 55.000 5.55 0.00 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.656457 TATGGCCCGCTATAGTCGA 57.344 52.632 15.26 0.00 0.00 4.20
19 20 1.913778 TATGGCCCGCTATAGTCGAA 58.086 50.000 15.26 2.60 0.00 3.71
20 21 0.317479 ATGGCCCGCTATAGTCGAAC 59.683 55.000 15.26 8.39 0.00 3.95
21 22 1.006454 GGCCCGCTATAGTCGAACC 60.006 63.158 15.26 12.31 0.00 3.62
22 23 1.006454 GCCCGCTATAGTCGAACCC 60.006 63.158 15.26 1.36 0.00 4.11
23 24 1.741327 GCCCGCTATAGTCGAACCCA 61.741 60.000 15.26 0.00 0.00 4.51
24 25 0.031721 CCCGCTATAGTCGAACCCAC 59.968 60.000 15.26 0.00 0.00 4.61
25 26 0.031721 CCGCTATAGTCGAACCCACC 59.968 60.000 15.26 0.00 0.00 4.61
26 27 0.742505 CGCTATAGTCGAACCCACCA 59.257 55.000 9.97 0.00 0.00 4.17
27 28 1.135527 CGCTATAGTCGAACCCACCAA 59.864 52.381 9.97 0.00 0.00 3.67
29 30 2.740904 GCTATAGTCGAACCCACCAACC 60.741 54.545 0.84 0.00 0.00 3.77
30 31 1.354101 ATAGTCGAACCCACCAACCA 58.646 50.000 0.00 0.00 0.00 3.67
31 32 1.129917 TAGTCGAACCCACCAACCAA 58.870 50.000 0.00 0.00 0.00 3.67
32 33 0.179029 AGTCGAACCCACCAACCAAG 60.179 55.000 0.00 0.00 0.00 3.61
34 35 1.129917 TCGAACCCACCAACCAAGTA 58.870 50.000 0.00 0.00 0.00 2.24
35 36 1.071071 TCGAACCCACCAACCAAGTAG 59.929 52.381 0.00 0.00 0.00 2.57
36 37 1.244816 GAACCCACCAACCAAGTAGC 58.755 55.000 0.00 0.00 0.00 3.58
37 38 0.553819 AACCCACCAACCAAGTAGCA 59.446 50.000 0.00 0.00 0.00 3.49
38 39 0.110486 ACCCACCAACCAAGTAGCAG 59.890 55.000 0.00 0.00 0.00 4.24
40 41 1.611673 CCCACCAACCAAGTAGCAGAG 60.612 57.143 0.00 0.00 0.00 3.35
41 42 1.611673 CCACCAACCAAGTAGCAGAGG 60.612 57.143 0.00 0.00 0.00 3.69
42 43 1.072331 CACCAACCAAGTAGCAGAGGT 59.928 52.381 0.00 0.00 35.47 3.85
43 44 1.348036 ACCAACCAAGTAGCAGAGGTC 59.652 52.381 0.00 0.00 32.05 3.85
44 45 1.625818 CCAACCAAGTAGCAGAGGTCT 59.374 52.381 0.00 0.00 32.05 3.85
45 46 2.039084 CCAACCAAGTAGCAGAGGTCTT 59.961 50.000 0.00 0.00 32.05 3.01
46 47 3.496870 CCAACCAAGTAGCAGAGGTCTTT 60.497 47.826 0.00 0.00 32.05 2.52
48 49 3.243724 ACCAAGTAGCAGAGGTCTTTCT 58.756 45.455 0.00 0.00 0.00 2.52
50 51 3.259374 CCAAGTAGCAGAGGTCTTTCTCA 59.741 47.826 0.00 0.00 36.30 3.27
51 52 4.262635 CCAAGTAGCAGAGGTCTTTCTCAA 60.263 45.833 0.00 0.00 36.30 3.02
53 54 5.552870 AGTAGCAGAGGTCTTTCTCAAAA 57.447 39.130 0.00 0.00 36.30 2.44
54 55 5.930135 AGTAGCAGAGGTCTTTCTCAAAAA 58.070 37.500 0.00 0.00 36.30 1.94
96 3591 2.737180 CCGTGTGTGGCTGTCTCT 59.263 61.111 0.00 0.00 0.00 3.10
97 3592 1.665916 CCGTGTGTGGCTGTCTCTG 60.666 63.158 0.00 0.00 0.00 3.35
98 3593 1.068083 CGTGTGTGGCTGTCTCTGT 59.932 57.895 0.00 0.00 0.00 3.41
107 3604 2.033602 TGTCTCTGTCTCGCCCGA 59.966 61.111 0.00 0.00 0.00 5.14
110 3607 3.827898 CTCTGTCTCGCCCGACCC 61.828 72.222 0.00 0.00 32.97 4.46
113 3610 4.051167 TGTCTCGCCCGACCCCTA 62.051 66.667 0.00 0.00 32.97 3.53
123 3620 1.110518 CCGACCCCTAGCTCCTCTTC 61.111 65.000 0.00 0.00 0.00 2.87
125 3622 0.761323 GACCCCTAGCTCCTCTTCCC 60.761 65.000 0.00 0.00 0.00 3.97
127 3624 1.460497 CCCTAGCTCCTCTTCCCCC 60.460 68.421 0.00 0.00 0.00 5.40
128 3625 1.314867 CCTAGCTCCTCTTCCCCCA 59.685 63.158 0.00 0.00 0.00 4.96
130 3627 1.697291 CCTAGCTCCTCTTCCCCCATT 60.697 57.143 0.00 0.00 0.00 3.16
131 3628 1.696884 CTAGCTCCTCTTCCCCCATTC 59.303 57.143 0.00 0.00 0.00 2.67
133 3630 1.832912 CTCCTCTTCCCCCATTCCG 59.167 63.158 0.00 0.00 0.00 4.30
136 3633 1.527370 CTCTTCCCCCATTCCGTCC 59.473 63.158 0.00 0.00 0.00 4.79
137 3634 1.984288 CTCTTCCCCCATTCCGTCCC 61.984 65.000 0.00 0.00 0.00 4.46
138 3635 2.204167 TTCCCCCATTCCGTCCCA 60.204 61.111 0.00 0.00 0.00 4.37
139 3636 1.853095 TTCCCCCATTCCGTCCCAA 60.853 57.895 0.00 0.00 0.00 4.12
140 3637 2.044352 CCCCCATTCCGTCCCAAC 60.044 66.667 0.00 0.00 0.00 3.77
141 3638 2.044352 CCCCATTCCGTCCCAACC 60.044 66.667 0.00 0.00 0.00 3.77
157 3654 4.986708 CCCCACCCAAACCCCACG 62.987 72.222 0.00 0.00 0.00 4.94
168 3671 4.814294 CCCCACGCCACGAGCTAC 62.814 72.222 0.00 0.00 40.39 3.58
290 3808 2.125350 CCTCGTCTGCAAGCCCTC 60.125 66.667 0.00 0.00 0.00 4.30
396 3917 3.461773 CAGGTCTGCGACGGGGAT 61.462 66.667 0.00 0.00 32.65 3.85
737 4264 2.576317 GTACTCGTCGGCGACAGC 60.576 66.667 35.62 18.05 42.81 4.40
1004 4531 0.902531 GGTTTCGTCTCCCTCATGGA 59.097 55.000 0.00 0.00 42.41 3.41
1038 4565 4.767255 CTGGGGCTCGCTGGTGTC 62.767 72.222 0.00 0.00 0.00 3.67
1105 4644 2.298729 GGAGCTGCAAAATGGGTACAAA 59.701 45.455 0.00 0.00 0.00 2.83
1164 4703 4.856801 CCCCGCGAAGGTGATGGG 62.857 72.222 8.23 2.27 38.74 4.00
1183 4722 2.175202 GGGCATATGTGGTTGGTTTCA 58.825 47.619 4.29 0.00 0.00 2.69
1254 4793 2.415608 CGAGCTCAAGTCCGGGCTA 61.416 63.158 10.18 0.00 35.01 3.93
1421 4982 4.640364 TGTGAACAGTCAGTCATATTGCA 58.360 39.130 0.00 0.00 33.27 4.08
1475 5036 8.602472 ATTCCTGTAAATACCTTGCCAAATTA 57.398 30.769 0.00 0.00 0.00 1.40
1479 5040 8.931775 CCTGTAAATACCTTGCCAAATTAAAAC 58.068 33.333 0.00 0.00 0.00 2.43
1521 5082 6.325919 ACGTAACATGTGACATTGGAAAAT 57.674 33.333 13.91 0.00 0.00 1.82
1573 5412 6.957984 CTGTTAAGGACCATGATGATATCG 57.042 41.667 0.00 0.00 0.00 2.92
1574 5413 6.664428 TGTTAAGGACCATGATGATATCGA 57.336 37.500 0.00 0.00 0.00 3.59
1575 5414 7.244886 TGTTAAGGACCATGATGATATCGAT 57.755 36.000 2.16 2.16 0.00 3.59
1576 5415 8.361169 TGTTAAGGACCATGATGATATCGATA 57.639 34.615 7.75 7.75 0.00 2.92
1577 5416 8.251026 TGTTAAGGACCATGATGATATCGATAC 58.749 37.037 7.41 2.86 0.00 2.24
1580 5419 5.037385 GGACCATGATGATATCGATACACG 58.963 45.833 7.41 0.00 44.09 4.49
1659 5503 6.974965 ACCTTGCTTCAGACTTTCTAATTTG 58.025 36.000 0.00 0.00 0.00 2.32
1735 5620 5.248477 AGCTCAGTCTTACCAAAGTGGAATA 59.752 40.000 0.18 0.00 40.96 1.75
1779 5671 5.942872 AGTTTTCAGCATGGTATCTTTTCG 58.057 37.500 0.00 0.00 36.16 3.46
1792 5684 5.010012 GGTATCTTTTCGGATCATGGCATTT 59.990 40.000 0.00 0.00 0.00 2.32
1794 5686 4.746729 TCTTTTCGGATCATGGCATTTTG 58.253 39.130 0.00 0.00 0.00 2.44
1795 5687 4.462132 TCTTTTCGGATCATGGCATTTTGA 59.538 37.500 0.00 0.00 0.00 2.69
1838 5730 3.513119 TGATCTCTTAAGTCTGCTGCTGT 59.487 43.478 1.63 0.00 0.00 4.40
1860 5752 7.517259 GCTGTTGCTGTTTTCTTTTAGATTTGG 60.517 37.037 0.00 0.00 36.03 3.28
1991 5884 3.881688 AGCATGTCAGCCATATTTCTGTC 59.118 43.478 0.00 0.00 34.23 3.51
1992 5885 3.628942 GCATGTCAGCCATATTTCTGTCA 59.371 43.478 0.00 4.31 34.12 3.58
1993 5886 4.261072 GCATGTCAGCCATATTTCTGTCAG 60.261 45.833 0.00 0.00 33.38 3.51
1994 5887 4.558226 TGTCAGCCATATTTCTGTCAGT 57.442 40.909 0.00 0.00 0.00 3.41
1995 5888 5.675684 TGTCAGCCATATTTCTGTCAGTA 57.324 39.130 0.00 0.00 0.00 2.74
1996 5889 5.664457 TGTCAGCCATATTTCTGTCAGTAG 58.336 41.667 0.00 0.00 0.00 2.57
2085 5978 6.348704 GCCATTTCCCTTTCATGAAATTTGTG 60.349 38.462 20.76 13.91 38.73 3.33
2178 6277 7.353414 TGGACAAACAATTGGAGATACAAAA 57.647 32.000 10.83 0.00 41.01 2.44
2185 6284 8.868522 AACAATTGGAGATACAAAATCTGAGA 57.131 30.769 10.83 0.00 33.48 3.27
2445 6820 2.093235 AGAGCCTTTGATGGACTAGCAC 60.093 50.000 0.00 0.00 0.00 4.40
2446 6821 1.009829 GCCTTTGATGGACTAGCACG 58.990 55.000 0.00 0.00 0.00 5.34
2452 6828 4.481930 TTGATGGACTAGCACGTTTTTG 57.518 40.909 0.00 0.00 0.00 2.44
2561 6937 2.037772 CGGTAGAGGATGGGAATGGAAG 59.962 54.545 0.00 0.00 0.00 3.46
2562 6938 3.049344 GGTAGAGGATGGGAATGGAAGT 58.951 50.000 0.00 0.00 0.00 3.01
2563 6939 4.232091 GGTAGAGGATGGGAATGGAAGTA 58.768 47.826 0.00 0.00 0.00 2.24
2566 6942 6.183361 GGTAGAGGATGGGAATGGAAGTAAAT 60.183 42.308 0.00 0.00 0.00 1.40
2567 6943 5.699143 AGAGGATGGGAATGGAAGTAAATG 58.301 41.667 0.00 0.00 0.00 2.32
2568 6944 4.808042 AGGATGGGAATGGAAGTAAATGG 58.192 43.478 0.00 0.00 0.00 3.16
2569 6945 4.482025 AGGATGGGAATGGAAGTAAATGGA 59.518 41.667 0.00 0.00 0.00 3.41
2570 6946 5.136737 AGGATGGGAATGGAAGTAAATGGAT 59.863 40.000 0.00 0.00 0.00 3.41
2571 6947 5.244626 GGATGGGAATGGAAGTAAATGGATG 59.755 44.000 0.00 0.00 0.00 3.51
2572 6948 3.960102 TGGGAATGGAAGTAAATGGATGC 59.040 43.478 0.00 0.00 0.00 3.91
2577 7407 6.127366 GGAATGGAAGTAAATGGATGCAAAGA 60.127 38.462 0.00 0.00 0.00 2.52
2581 7411 6.127647 TGGAAGTAAATGGATGCAAAGATGTC 60.128 38.462 0.00 0.00 0.00 3.06
2672 7508 8.121305 TCTGCACCTGTTGTATTTATGAAATT 57.879 30.769 0.00 0.00 32.38 1.82
2712 7548 9.594478 CTAAGTTTAGGTGTTGGTTTTGATTTT 57.406 29.630 0.00 0.00 0.00 1.82
2713 7549 8.487313 AAGTTTAGGTGTTGGTTTTGATTTTC 57.513 30.769 0.00 0.00 0.00 2.29
2722 7558 2.157474 GGTTTTGATTTTCGTGCATGCC 59.843 45.455 16.68 5.63 0.00 4.40
2723 7559 1.695813 TTTGATTTTCGTGCATGCCG 58.304 45.000 16.68 17.91 0.00 5.69
2802 7645 0.472734 ACTCAAGAGCAGGACCTGGT 60.473 55.000 26.02 26.02 45.28 4.00
2897 7809 4.223923 TCTTGAAGTCTTGGGAGATCCTTC 59.776 45.833 0.00 0.00 36.38 3.46
2902 7814 5.109500 AGTCTTGGGAGATCCTTCATTTC 57.891 43.478 0.00 0.00 33.70 2.17
2903 7815 4.787534 AGTCTTGGGAGATCCTTCATTTCT 59.212 41.667 0.00 0.00 33.70 2.52
2968 7908 0.749454 ATGCGAGGGATGCAGGTTTC 60.749 55.000 0.00 0.00 46.98 2.78
3015 7955 5.339365 CCCAAAATTCATCCATCCAAACCAT 60.339 40.000 0.00 0.00 0.00 3.55
3021 7961 3.152341 CATCCATCCAAACCATCTAGCC 58.848 50.000 0.00 0.00 0.00 3.93
3024 7964 1.952296 CATCCAAACCATCTAGCCAGC 59.048 52.381 0.00 0.00 0.00 4.85
3025 7965 1.289160 TCCAAACCATCTAGCCAGCT 58.711 50.000 0.00 0.00 0.00 4.24
3083 8024 3.462678 GAGGGGTGTCCGAGAGCC 61.463 72.222 5.19 5.19 41.52 4.70
3096 8061 1.066573 CGAGAGCCACTGAGGTCAATT 60.067 52.381 0.00 0.00 40.61 2.32
3161 8126 7.341445 ACTAAAGGTTGTACAAGCATCAAAA 57.659 32.000 32.69 14.81 40.96 2.44
3209 8174 5.040635 AGTTGCTGTTTGGTTAATGTTTCG 58.959 37.500 0.00 0.00 0.00 3.46
3238 8203 2.246588 AGGCTACTATGTGGGGTCTGTA 59.753 50.000 0.00 0.00 0.00 2.74
3239 8204 3.036091 GGCTACTATGTGGGGTCTGTAA 58.964 50.000 0.00 0.00 0.00 2.41
3240 8205 3.646637 GGCTACTATGTGGGGTCTGTAAT 59.353 47.826 0.00 0.00 0.00 1.89
3241 8206 4.262506 GGCTACTATGTGGGGTCTGTAATC 60.263 50.000 0.00 0.00 0.00 1.75
3242 8207 4.589374 GCTACTATGTGGGGTCTGTAATCT 59.411 45.833 0.00 0.00 0.00 2.40
3243 8208 5.509840 GCTACTATGTGGGGTCTGTAATCTG 60.510 48.000 0.00 0.00 0.00 2.90
3244 8209 4.362677 ACTATGTGGGGTCTGTAATCTGT 58.637 43.478 0.00 0.00 0.00 3.41
3245 8210 4.783227 ACTATGTGGGGTCTGTAATCTGTT 59.217 41.667 0.00 0.00 0.00 3.16
3337 8312 4.794278 AAACGGGGGCAAAAATAGTTAG 57.206 40.909 0.00 0.00 0.00 2.34
3349 8324 4.616181 AAATAGTTAGCATGCAACCGTC 57.384 40.909 21.98 3.97 0.00 4.79
3356 8331 0.385974 GCATGCAACCGTCTTGTCAC 60.386 55.000 14.21 0.00 0.00 3.67
3357 8332 0.238289 CATGCAACCGTCTTGTCACC 59.762 55.000 0.00 0.00 0.00 4.02
3358 8333 1.227999 ATGCAACCGTCTTGTCACCG 61.228 55.000 0.00 0.00 0.00 4.94
3359 8334 1.885850 GCAACCGTCTTGTCACCGT 60.886 57.895 0.00 0.00 0.00 4.83
3360 8335 1.931551 CAACCGTCTTGTCACCGTG 59.068 57.895 0.00 0.00 0.00 4.94
3361 8336 0.808453 CAACCGTCTTGTCACCGTGT 60.808 55.000 0.00 0.00 0.00 4.49
3362 8337 0.529119 AACCGTCTTGTCACCGTGTC 60.529 55.000 0.00 0.00 0.00 3.67
3363 8338 1.362717 CCGTCTTGTCACCGTGTCT 59.637 57.895 0.00 0.00 0.00 3.41
3364 8339 0.594602 CCGTCTTGTCACCGTGTCTA 59.405 55.000 0.00 0.00 0.00 2.59
3365 8340 1.665161 CCGTCTTGTCACCGTGTCTAC 60.665 57.143 0.00 0.00 0.00 2.59
3376 8351 2.125168 CGTGTCTACGTCGCATTTTG 57.875 50.000 0.00 0.00 44.99 2.44
3377 8352 1.454276 CGTGTCTACGTCGCATTTTGT 59.546 47.619 0.00 0.00 44.99 2.83
3378 8353 2.717595 CGTGTCTACGTCGCATTTTGTG 60.718 50.000 0.00 0.00 44.99 3.33
3379 8354 2.220133 GTGTCTACGTCGCATTTTGTGT 59.780 45.455 0.00 0.00 0.00 3.72
3380 8355 2.867368 TGTCTACGTCGCATTTTGTGTT 59.133 40.909 0.00 0.00 0.00 3.32
3381 8356 3.215244 GTCTACGTCGCATTTTGTGTTG 58.785 45.455 0.00 0.00 0.00 3.33
3382 8357 2.867368 TCTACGTCGCATTTTGTGTTGT 59.133 40.909 0.00 0.00 0.00 3.32
3383 8358 2.553079 ACGTCGCATTTTGTGTTGTT 57.447 40.000 0.00 0.00 0.00 2.83
3384 8359 2.446282 ACGTCGCATTTTGTGTTGTTC 58.554 42.857 0.00 0.00 0.00 3.18
3385 8360 2.159503 ACGTCGCATTTTGTGTTGTTCA 60.160 40.909 0.00 0.00 0.00 3.18
3386 8361 2.213131 CGTCGCATTTTGTGTTGTTCAC 59.787 45.455 0.00 0.00 46.31 3.18
3394 8369 3.988459 GTGTTGTTCACGTGTGCTT 57.012 47.368 16.51 0.00 37.31 3.91
3395 8370 1.810197 GTGTTGTTCACGTGTGCTTC 58.190 50.000 16.51 5.74 37.31 3.86
3396 8371 0.730265 TGTTGTTCACGTGTGCTTCC 59.270 50.000 16.51 1.43 0.00 3.46
3397 8372 1.014352 GTTGTTCACGTGTGCTTCCT 58.986 50.000 16.51 0.00 0.00 3.36
3398 8373 1.013596 TTGTTCACGTGTGCTTCCTG 58.986 50.000 16.51 0.00 0.00 3.86
3399 8374 0.176910 TGTTCACGTGTGCTTCCTGA 59.823 50.000 16.51 0.00 0.00 3.86
3400 8375 0.582005 GTTCACGTGTGCTTCCTGAC 59.418 55.000 16.51 0.00 0.00 3.51
3401 8376 0.176910 TTCACGTGTGCTTCCTGACA 59.823 50.000 16.51 0.00 0.00 3.58
3402 8377 0.249447 TCACGTGTGCTTCCTGACAG 60.249 55.000 16.51 0.00 0.00 3.51
3403 8378 0.530650 CACGTGTGCTTCCTGACAGT 60.531 55.000 7.58 0.00 0.00 3.55
3404 8379 0.530650 ACGTGTGCTTCCTGACAGTG 60.531 55.000 0.93 0.00 0.00 3.66
3405 8380 0.249447 CGTGTGCTTCCTGACAGTGA 60.249 55.000 0.00 0.00 0.00 3.41
3406 8381 1.806247 CGTGTGCTTCCTGACAGTGAA 60.806 52.381 0.00 4.23 0.00 3.18
3407 8382 1.599542 GTGTGCTTCCTGACAGTGAAC 59.400 52.381 0.00 0.00 0.00 3.18
3408 8383 1.209261 TGTGCTTCCTGACAGTGAACA 59.791 47.619 0.00 0.00 0.00 3.18
3409 8384 2.288666 GTGCTTCCTGACAGTGAACAA 58.711 47.619 0.00 0.00 0.00 2.83
3410 8385 2.032178 GTGCTTCCTGACAGTGAACAAC 59.968 50.000 0.00 1.36 0.00 3.32
3411 8386 1.261619 GCTTCCTGACAGTGAACAACG 59.738 52.381 0.00 0.00 0.00 4.10
3412 8387 1.867233 CTTCCTGACAGTGAACAACGG 59.133 52.381 0.00 0.00 0.00 4.44
3413 8388 0.531974 TCCTGACAGTGAACAACGGC 60.532 55.000 0.00 0.00 0.00 5.68
3414 8389 0.532862 CCTGACAGTGAACAACGGCT 60.533 55.000 0.00 0.00 0.00 5.52
3415 8390 0.583438 CTGACAGTGAACAACGGCTG 59.417 55.000 0.00 0.00 35.31 4.85
3416 8391 1.279840 GACAGTGAACAACGGCTGC 59.720 57.895 0.00 0.00 32.65 5.25
3417 8392 2.117941 GACAGTGAACAACGGCTGCC 62.118 60.000 9.11 9.11 32.65 4.85
3418 8393 1.893808 CAGTGAACAACGGCTGCCT 60.894 57.895 17.92 0.55 0.00 4.75
3419 8394 1.598130 AGTGAACAACGGCTGCCTC 60.598 57.895 17.92 7.53 0.00 4.70
3420 8395 1.598130 GTGAACAACGGCTGCCTCT 60.598 57.895 17.92 0.00 0.00 3.69
3421 8396 1.148273 TGAACAACGGCTGCCTCTT 59.852 52.632 17.92 4.85 0.00 2.85
3422 8397 0.465460 TGAACAACGGCTGCCTCTTT 60.465 50.000 17.92 4.16 0.00 2.52
3423 8398 0.040067 GAACAACGGCTGCCTCTTTG 60.040 55.000 17.92 17.86 0.00 2.77
3424 8399 0.751643 AACAACGGCTGCCTCTTTGT 60.752 50.000 17.92 18.47 31.74 2.83
3425 8400 0.107831 ACAACGGCTGCCTCTTTGTA 59.892 50.000 21.53 0.00 0.00 2.41
3426 8401 1.271379 ACAACGGCTGCCTCTTTGTAT 60.271 47.619 21.53 5.52 0.00 2.29
3427 8402 2.027561 ACAACGGCTGCCTCTTTGTATA 60.028 45.455 21.53 0.00 0.00 1.47
3428 8403 3.006940 CAACGGCTGCCTCTTTGTATAA 58.993 45.455 17.92 0.00 0.00 0.98
3429 8404 3.560636 ACGGCTGCCTCTTTGTATAAT 57.439 42.857 17.92 0.00 0.00 1.28
3430 8405 4.682778 ACGGCTGCCTCTTTGTATAATA 57.317 40.909 17.92 0.00 0.00 0.98
3431 8406 5.031066 ACGGCTGCCTCTTTGTATAATAA 57.969 39.130 17.92 0.00 0.00 1.40
3432 8407 4.814771 ACGGCTGCCTCTTTGTATAATAAC 59.185 41.667 17.92 0.00 0.00 1.89
3433 8408 4.084537 CGGCTGCCTCTTTGTATAATAACG 60.085 45.833 17.92 0.00 0.00 3.18
3434 8409 4.319549 GGCTGCCTCTTTGTATAATAACGC 60.320 45.833 12.43 0.00 0.00 4.84
3435 8410 4.608445 GCTGCCTCTTTGTATAATAACGCG 60.608 45.833 3.53 3.53 0.00 6.01
3436 8411 3.246699 TGCCTCTTTGTATAATAACGCGC 59.753 43.478 5.73 0.00 0.00 6.86
3437 8412 3.493503 GCCTCTTTGTATAATAACGCGCT 59.506 43.478 5.73 0.00 0.00 5.92
3438 8413 4.376109 GCCTCTTTGTATAATAACGCGCTC 60.376 45.833 5.73 0.00 0.00 5.03
3439 8414 4.150098 CCTCTTTGTATAATAACGCGCTCC 59.850 45.833 5.73 0.00 0.00 4.70
3440 8415 4.684877 TCTTTGTATAATAACGCGCTCCA 58.315 39.130 5.73 0.00 0.00 3.86
3441 8416 4.505191 TCTTTGTATAATAACGCGCTCCAC 59.495 41.667 5.73 0.00 0.00 4.02
3442 8417 2.746269 TGTATAATAACGCGCTCCACC 58.254 47.619 5.73 0.00 0.00 4.61
3443 8418 2.101082 TGTATAATAACGCGCTCCACCA 59.899 45.455 5.73 0.00 0.00 4.17
3444 8419 1.578583 ATAATAACGCGCTCCACCAC 58.421 50.000 5.73 0.00 0.00 4.16
3445 8420 0.533491 TAATAACGCGCTCCACCACT 59.467 50.000 5.73 0.00 0.00 4.00
3446 8421 0.321298 AATAACGCGCTCCACCACTT 60.321 50.000 5.73 0.00 0.00 3.16
3447 8422 1.019278 ATAACGCGCTCCACCACTTG 61.019 55.000 5.73 0.00 0.00 3.16
3452 8427 2.031163 GCTCCACCACTTGCGAGT 59.969 61.111 0.00 0.00 36.25 4.18
3461 8436 2.861763 CACTTGCGAGTGTATGTGTG 57.138 50.000 23.84 0.00 46.57 3.82
3462 8437 2.135139 CACTTGCGAGTGTATGTGTGT 58.865 47.619 23.84 0.00 46.57 3.72
3463 8438 2.096762 CACTTGCGAGTGTATGTGTGTG 60.097 50.000 23.84 0.00 46.57 3.82
3464 8439 2.223947 ACTTGCGAGTGTATGTGTGTGA 60.224 45.455 5.59 0.00 33.99 3.58
3465 8440 2.064573 TGCGAGTGTATGTGTGTGAG 57.935 50.000 0.00 0.00 0.00 3.51
3466 8441 1.611491 TGCGAGTGTATGTGTGTGAGA 59.389 47.619 0.00 0.00 0.00 3.27
3467 8442 2.254459 GCGAGTGTATGTGTGTGAGAG 58.746 52.381 0.00 0.00 0.00 3.20
3468 8443 2.095212 GCGAGTGTATGTGTGTGAGAGA 60.095 50.000 0.00 0.00 0.00 3.10
3469 8444 3.611766 GCGAGTGTATGTGTGTGAGAGAA 60.612 47.826 0.00 0.00 0.00 2.87
3470 8445 3.914966 CGAGTGTATGTGTGTGAGAGAAC 59.085 47.826 0.00 0.00 0.00 3.01
3471 8446 4.556699 CGAGTGTATGTGTGTGAGAGAACA 60.557 45.833 0.00 0.00 0.00 3.18
3472 8447 5.276461 AGTGTATGTGTGTGAGAGAACAA 57.724 39.130 0.00 0.00 0.00 2.83
3473 8448 5.670485 AGTGTATGTGTGTGAGAGAACAAA 58.330 37.500 0.00 0.00 0.00 2.83
3474 8449 6.291377 AGTGTATGTGTGTGAGAGAACAAAT 58.709 36.000 0.00 0.00 0.00 2.32
3475 8450 6.203530 AGTGTATGTGTGTGAGAGAACAAATG 59.796 38.462 0.00 0.00 0.00 2.32
3476 8451 3.969117 TGTGTGTGAGAGAACAAATGC 57.031 42.857 0.00 0.00 0.00 3.56
3477 8452 2.287644 TGTGTGTGAGAGAACAAATGCG 59.712 45.455 0.00 0.00 0.00 4.73
3478 8453 2.287915 GTGTGTGAGAGAACAAATGCGT 59.712 45.455 0.00 0.00 0.00 5.24
3479 8454 2.287644 TGTGTGAGAGAACAAATGCGTG 59.712 45.455 0.00 0.00 0.00 5.34
3480 8455 1.264020 TGTGAGAGAACAAATGCGTGC 59.736 47.619 0.00 0.00 0.00 5.34
3481 8456 0.512518 TGAGAGAACAAATGCGTGCG 59.487 50.000 0.00 0.00 0.00 5.34
3482 8457 0.790866 GAGAGAACAAATGCGTGCGC 60.791 55.000 9.85 9.85 42.35 6.09
3483 8458 2.127270 AGAACAAATGCGTGCGCG 60.127 55.556 16.86 16.86 45.51 6.86
3484 8459 2.426752 GAACAAATGCGTGCGCGT 60.427 55.556 22.18 8.83 45.51 6.01
3485 8460 2.696521 GAACAAATGCGTGCGCGTG 61.697 57.895 22.18 13.76 45.51 5.34
3486 8461 3.462333 AACAAATGCGTGCGCGTGT 62.462 52.632 22.18 14.45 45.51 4.49
3487 8462 3.451828 CAAATGCGTGCGCGTGTG 61.452 61.111 22.18 13.53 45.51 3.82
3488 8463 3.947841 AAATGCGTGCGCGTGTGT 61.948 55.556 22.18 2.21 45.51 3.72
3489 8464 4.664864 AATGCGTGCGCGTGTGTG 62.665 61.111 22.18 0.00 45.51 3.82
3499 8474 2.356313 CGTGTGTGCGCCTCTTCT 60.356 61.111 4.18 0.00 0.00 2.85
3500 8475 2.375766 CGTGTGTGCGCCTCTTCTC 61.376 63.158 4.18 0.00 0.00 2.87
3501 8476 1.005630 GTGTGTGCGCCTCTTCTCT 60.006 57.895 4.18 0.00 0.00 3.10
3502 8477 0.601311 GTGTGTGCGCCTCTTCTCTT 60.601 55.000 4.18 0.00 0.00 2.85
3503 8478 0.106708 TGTGTGCGCCTCTTCTCTTT 59.893 50.000 4.18 0.00 0.00 2.52
3504 8479 0.514691 GTGTGCGCCTCTTCTCTTTG 59.485 55.000 4.18 0.00 0.00 2.77
3505 8480 0.106708 TGTGCGCCTCTTCTCTTTGT 59.893 50.000 4.18 0.00 0.00 2.83
3506 8481 1.343142 TGTGCGCCTCTTCTCTTTGTA 59.657 47.619 4.18 0.00 0.00 2.41
3507 8482 2.028112 TGTGCGCCTCTTCTCTTTGTAT 60.028 45.455 4.18 0.00 0.00 2.29
3508 8483 3.194755 TGTGCGCCTCTTCTCTTTGTATA 59.805 43.478 4.18 0.00 0.00 1.47
3509 8484 3.799420 GTGCGCCTCTTCTCTTTGTATAG 59.201 47.826 4.18 0.00 0.00 1.31
3510 8485 3.181475 TGCGCCTCTTCTCTTTGTATAGG 60.181 47.826 4.18 0.00 0.00 2.57
3511 8486 3.068307 GCGCCTCTTCTCTTTGTATAGGA 59.932 47.826 0.00 0.00 0.00 2.94
3512 8487 4.441634 GCGCCTCTTCTCTTTGTATAGGAA 60.442 45.833 0.00 0.00 0.00 3.36
3513 8488 5.661458 CGCCTCTTCTCTTTGTATAGGAAA 58.339 41.667 0.00 0.00 0.00 3.13
3514 8489 6.106673 CGCCTCTTCTCTTTGTATAGGAAAA 58.893 40.000 0.00 0.00 0.00 2.29
3515 8490 6.594159 CGCCTCTTCTCTTTGTATAGGAAAAA 59.406 38.462 0.00 0.00 0.00 1.94
3516 8491 7.201565 CGCCTCTTCTCTTTGTATAGGAAAAAG 60.202 40.741 0.00 0.00 33.19 2.27
3517 8492 7.608376 GCCTCTTCTCTTTGTATAGGAAAAAGT 59.392 37.037 0.00 0.00 33.56 2.66
3518 8493 9.157104 CCTCTTCTCTTTGTATAGGAAAAAGTC 57.843 37.037 0.00 0.00 33.56 3.01
3533 8508 6.741109 GGAAAAAGTCCGAAATAAACCTTGA 58.259 36.000 0.00 0.00 36.40 3.02
3534 8509 6.861572 GGAAAAAGTCCGAAATAAACCTTGAG 59.138 38.462 0.00 0.00 36.40 3.02
3535 8510 5.372547 AAAGTCCGAAATAAACCTTGAGC 57.627 39.130 0.00 0.00 0.00 4.26
3536 8511 4.287766 AGTCCGAAATAAACCTTGAGCT 57.712 40.909 0.00 0.00 0.00 4.09
3537 8512 4.254492 AGTCCGAAATAAACCTTGAGCTC 58.746 43.478 6.82 6.82 0.00 4.09
3538 8513 3.062234 GTCCGAAATAAACCTTGAGCTCG 59.938 47.826 9.64 0.00 0.00 5.03
3539 8514 3.000727 CCGAAATAAACCTTGAGCTCGT 58.999 45.455 9.64 0.00 0.00 4.18
3540 8515 4.082081 TCCGAAATAAACCTTGAGCTCGTA 60.082 41.667 9.64 0.00 0.00 3.43
3541 8516 4.267928 CCGAAATAAACCTTGAGCTCGTAG 59.732 45.833 9.64 8.88 0.00 3.51
3542 8517 4.267928 CGAAATAAACCTTGAGCTCGTAGG 59.732 45.833 25.35 25.35 35.14 3.18
3543 8518 2.667473 TAAACCTTGAGCTCGTAGGC 57.333 50.000 26.37 0.00 32.08 3.93
3544 8519 0.389948 AAACCTTGAGCTCGTAGGCG 60.390 55.000 26.37 10.90 37.29 5.52
3545 8520 1.533469 AACCTTGAGCTCGTAGGCGT 61.533 55.000 26.37 16.17 39.49 5.68
3546 8521 1.215647 CCTTGAGCTCGTAGGCGTT 59.784 57.895 18.52 0.00 39.49 4.84
3547 8522 0.389948 CCTTGAGCTCGTAGGCGTTT 60.390 55.000 18.52 0.00 39.49 3.60
3548 8523 1.429463 CTTGAGCTCGTAGGCGTTTT 58.571 50.000 9.64 0.00 39.49 2.43
3549 8524 1.390463 CTTGAGCTCGTAGGCGTTTTC 59.610 52.381 9.64 0.00 39.49 2.29
3550 8525 0.315886 TGAGCTCGTAGGCGTTTTCA 59.684 50.000 9.64 0.00 39.49 2.69
3551 8526 1.067142 TGAGCTCGTAGGCGTTTTCAT 60.067 47.619 9.64 0.00 39.49 2.57
3552 8527 2.000447 GAGCTCGTAGGCGTTTTCATT 59.000 47.619 0.00 0.00 39.49 2.57
3553 8528 2.415512 GAGCTCGTAGGCGTTTTCATTT 59.584 45.455 0.00 0.00 39.49 2.32
3554 8529 2.812011 AGCTCGTAGGCGTTTTCATTTT 59.188 40.909 0.00 0.00 39.49 1.82
3555 8530 3.998341 AGCTCGTAGGCGTTTTCATTTTA 59.002 39.130 0.00 0.00 39.49 1.52
3556 8531 4.634443 AGCTCGTAGGCGTTTTCATTTTAT 59.366 37.500 0.00 0.00 39.49 1.40
3557 8532 5.123344 AGCTCGTAGGCGTTTTCATTTTATT 59.877 36.000 0.00 0.00 39.49 1.40
3558 8533 5.451342 GCTCGTAGGCGTTTTCATTTTATTC 59.549 40.000 0.00 0.00 39.49 1.75
3559 8534 6.483385 TCGTAGGCGTTTTCATTTTATTCA 57.517 33.333 0.00 0.00 39.49 2.57
3560 8535 7.079182 TCGTAGGCGTTTTCATTTTATTCAT 57.921 32.000 0.00 0.00 39.49 2.57
3561 8536 7.531716 TCGTAGGCGTTTTCATTTTATTCATT 58.468 30.769 0.00 0.00 39.49 2.57
3562 8537 8.024285 TCGTAGGCGTTTTCATTTTATTCATTT 58.976 29.630 0.00 0.00 39.49 2.32
3563 8538 8.643752 CGTAGGCGTTTTCATTTTATTCATTTT 58.356 29.630 0.00 0.00 0.00 1.82
3564 8539 9.952341 GTAGGCGTTTTCATTTTATTCATTTTC 57.048 29.630 0.00 0.00 0.00 2.29
3565 8540 8.831715 AGGCGTTTTCATTTTATTCATTTTCT 57.168 26.923 0.00 0.00 0.00 2.52
3566 8541 8.711457 AGGCGTTTTCATTTTATTCATTTTCTG 58.289 29.630 0.00 0.00 0.00 3.02
3567 8542 8.495148 GGCGTTTTCATTTTATTCATTTTCTGT 58.505 29.630 0.00 0.00 0.00 3.41
3568 8543 9.516091 GCGTTTTCATTTTATTCATTTTCTGTC 57.484 29.630 0.00 0.00 0.00 3.51
3569 8544 9.712410 CGTTTTCATTTTATTCATTTTCTGTCG 57.288 29.630 0.00 0.00 0.00 4.35
3577 8552 9.810545 TTTTATTCATTTTCTGTCGTTTTTCCT 57.189 25.926 0.00 0.00 0.00 3.36
3578 8553 9.810545 TTTATTCATTTTCTGTCGTTTTTCCTT 57.189 25.926 0.00 0.00 0.00 3.36
3579 8554 7.930513 ATTCATTTTCTGTCGTTTTTCCTTC 57.069 32.000 0.00 0.00 0.00 3.46
3580 8555 6.443934 TCATTTTCTGTCGTTTTTCCTTCA 57.556 33.333 0.00 0.00 0.00 3.02
3581 8556 7.038154 TCATTTTCTGTCGTTTTTCCTTCAT 57.962 32.000 0.00 0.00 0.00 2.57
3582 8557 6.917477 TCATTTTCTGTCGTTTTTCCTTCATG 59.083 34.615 0.00 0.00 0.00 3.07
3583 8558 5.828299 TTTCTGTCGTTTTTCCTTCATGT 57.172 34.783 0.00 0.00 0.00 3.21
3584 8559 5.828299 TTCTGTCGTTTTTCCTTCATGTT 57.172 34.783 0.00 0.00 0.00 2.71
3585 8560 5.828299 TCTGTCGTTTTTCCTTCATGTTT 57.172 34.783 0.00 0.00 0.00 2.83
3586 8561 6.202516 TCTGTCGTTTTTCCTTCATGTTTT 57.797 33.333 0.00 0.00 0.00 2.43
3587 8562 6.262601 TCTGTCGTTTTTCCTTCATGTTTTC 58.737 36.000 0.00 0.00 0.00 2.29
3588 8563 6.094881 TCTGTCGTTTTTCCTTCATGTTTTCT 59.905 34.615 0.00 0.00 0.00 2.52
3589 8564 6.626302 TGTCGTTTTTCCTTCATGTTTTCTT 58.374 32.000 0.00 0.00 0.00 2.52
3590 8565 7.093992 TGTCGTTTTTCCTTCATGTTTTCTTT 58.906 30.769 0.00 0.00 0.00 2.52
3591 8566 8.244802 TGTCGTTTTTCCTTCATGTTTTCTTTA 58.755 29.630 0.00 0.00 0.00 1.85
3592 8567 9.244799 GTCGTTTTTCCTTCATGTTTTCTTTAT 57.755 29.630 0.00 0.00 0.00 1.40
3601 8576 9.754382 CCTTCATGTTTTCTTTATATCCATTGG 57.246 33.333 0.00 0.00 0.00 3.16
3611 8586 8.220755 TCTTTATATCCATTGGTTTTCTTCGG 57.779 34.615 1.86 0.00 0.00 4.30
3612 8587 7.832187 TCTTTATATCCATTGGTTTTCTTCGGT 59.168 33.333 1.86 0.00 0.00 4.69
3613 8588 7.948034 TTATATCCATTGGTTTTCTTCGGTT 57.052 32.000 1.86 0.00 0.00 4.44
3614 8589 6.850752 ATATCCATTGGTTTTCTTCGGTTT 57.149 33.333 1.86 0.00 0.00 3.27
3615 8590 5.545063 ATCCATTGGTTTTCTTCGGTTTT 57.455 34.783 1.86 0.00 0.00 2.43
3616 8591 5.346181 TCCATTGGTTTTCTTCGGTTTTT 57.654 34.783 1.86 0.00 0.00 1.94
3641 8616 9.838339 TTTCCCTTTGCTATATTTTGTTTTTCA 57.162 25.926 0.00 0.00 0.00 2.69
3642 8617 9.838339 TTCCCTTTGCTATATTTTGTTTTTCAA 57.162 25.926 0.00 0.00 0.00 2.69
3643 8618 9.838339 TCCCTTTGCTATATTTTGTTTTTCAAA 57.162 25.926 0.00 0.00 43.24 2.69
3664 8639 9.980780 TTCAAATACATTATGTACATTGTCACG 57.019 29.630 14.77 3.87 35.42 4.35
3665 8640 8.119845 TCAAATACATTATGTACATTGTCACGC 58.880 33.333 14.77 0.00 35.42 5.34
3666 8641 7.786178 AATACATTATGTACATTGTCACGCT 57.214 32.000 14.77 0.00 35.42 5.07
3667 8642 5.718649 ACATTATGTACATTGTCACGCTC 57.281 39.130 14.77 0.00 0.00 5.03
3668 8643 5.419542 ACATTATGTACATTGTCACGCTCT 58.580 37.500 14.77 0.00 0.00 4.09
3669 8644 5.291858 ACATTATGTACATTGTCACGCTCTG 59.708 40.000 14.77 0.62 0.00 3.35
3670 8645 1.428448 TGTACATTGTCACGCTCTGC 58.572 50.000 0.00 0.00 0.00 4.26
3671 8646 0.721718 GTACATTGTCACGCTCTGCC 59.278 55.000 0.00 0.00 0.00 4.85
3672 8647 0.320050 TACATTGTCACGCTCTGCCA 59.680 50.000 0.00 0.00 0.00 4.92
3673 8648 0.321919 ACATTGTCACGCTCTGCCAT 60.322 50.000 0.00 0.00 0.00 4.40
3674 8649 0.376152 CATTGTCACGCTCTGCCATC 59.624 55.000 0.00 0.00 0.00 3.51
3675 8650 1.086067 ATTGTCACGCTCTGCCATCG 61.086 55.000 0.00 0.00 0.00 3.84
3676 8651 2.125912 GTCACGCTCTGCCATCGT 60.126 61.111 0.00 0.00 36.84 3.73
3677 8652 1.738099 GTCACGCTCTGCCATCGTT 60.738 57.895 0.00 0.00 33.84 3.85
3678 8653 0.457853 GTCACGCTCTGCCATCGTTA 60.458 55.000 0.00 0.00 33.84 3.18
3679 8654 0.457853 TCACGCTCTGCCATCGTTAC 60.458 55.000 0.00 0.00 33.84 2.50
3680 8655 1.516386 ACGCTCTGCCATCGTTACG 60.516 57.895 0.00 0.00 31.89 3.18
3681 8656 2.860628 CGCTCTGCCATCGTTACGC 61.861 63.158 0.00 0.00 0.00 4.42
3682 8657 1.519455 GCTCTGCCATCGTTACGCT 60.519 57.895 0.00 0.00 0.00 5.07
3683 8658 1.084370 GCTCTGCCATCGTTACGCTT 61.084 55.000 0.00 0.00 0.00 4.68
3684 8659 1.359848 CTCTGCCATCGTTACGCTTT 58.640 50.000 0.00 0.00 0.00 3.51
3685 8660 1.324736 CTCTGCCATCGTTACGCTTTC 59.675 52.381 0.00 0.00 0.00 2.62
3686 8661 1.075542 CTGCCATCGTTACGCTTTCA 58.924 50.000 0.00 0.00 0.00 2.69
3687 8662 1.463056 CTGCCATCGTTACGCTTTCAA 59.537 47.619 0.00 0.00 0.00 2.69
3688 8663 1.195900 TGCCATCGTTACGCTTTCAAC 59.804 47.619 0.00 0.00 0.00 3.18
3689 8664 1.195900 GCCATCGTTACGCTTTCAACA 59.804 47.619 0.00 0.00 0.00 3.33
3690 8665 2.159572 GCCATCGTTACGCTTTCAACAT 60.160 45.455 0.00 0.00 0.00 2.71
3691 8666 3.669557 GCCATCGTTACGCTTTCAACATT 60.670 43.478 0.00 0.00 0.00 2.71
3692 8667 4.472286 CCATCGTTACGCTTTCAACATTT 58.528 39.130 0.00 0.00 0.00 2.32
3693 8668 4.915085 CCATCGTTACGCTTTCAACATTTT 59.085 37.500 0.00 0.00 0.00 1.82
3694 8669 5.401079 CCATCGTTACGCTTTCAACATTTTT 59.599 36.000 0.00 0.00 0.00 1.94
3695 8670 6.398517 CCATCGTTACGCTTTCAACATTTTTC 60.399 38.462 0.00 0.00 0.00 2.29
3696 8671 5.570344 TCGTTACGCTTTCAACATTTTTCA 58.430 33.333 0.00 0.00 0.00 2.69
3697 8672 6.028368 TCGTTACGCTTTCAACATTTTTCAA 58.972 32.000 0.00 0.00 0.00 2.69
3698 8673 6.527023 TCGTTACGCTTTCAACATTTTTCAAA 59.473 30.769 0.00 0.00 0.00 2.69
3699 8674 7.221067 TCGTTACGCTTTCAACATTTTTCAAAT 59.779 29.630 0.00 0.00 0.00 2.32
3700 8675 8.473016 CGTTACGCTTTCAACATTTTTCAAATA 58.527 29.630 0.00 0.00 0.00 1.40
3728 8703 8.916628 TTATATACATTAGCAGGCACATGAAA 57.083 30.769 0.00 0.00 0.00 2.69
3729 8704 3.855689 ACATTAGCAGGCACATGAAAC 57.144 42.857 0.00 0.00 0.00 2.78
3730 8705 3.156293 ACATTAGCAGGCACATGAAACA 58.844 40.909 0.00 0.00 0.00 2.83
3731 8706 3.765511 ACATTAGCAGGCACATGAAACAT 59.234 39.130 0.00 0.00 0.00 2.71
3732 8707 4.221262 ACATTAGCAGGCACATGAAACATT 59.779 37.500 0.00 0.00 0.00 2.71
3733 8708 4.870123 TTAGCAGGCACATGAAACATTT 57.130 36.364 0.00 0.00 0.00 2.32
3734 8709 3.756933 AGCAGGCACATGAAACATTTT 57.243 38.095 0.00 0.00 0.00 1.82
3735 8710 4.075963 AGCAGGCACATGAAACATTTTT 57.924 36.364 0.00 0.00 0.00 1.94
3755 8730 6.900568 TTTTTGATGCACTTTCGACATTTT 57.099 29.167 0.00 0.00 0.00 1.82
3756 8731 6.900568 TTTTGATGCACTTTCGACATTTTT 57.099 29.167 0.00 0.00 0.00 1.94
3757 8732 6.509317 TTTGATGCACTTTCGACATTTTTC 57.491 33.333 0.00 0.00 0.00 2.29
3758 8733 5.180367 TGATGCACTTTCGACATTTTTCA 57.820 34.783 0.00 0.00 0.00 2.69
3759 8734 5.586339 TGATGCACTTTCGACATTTTTCAA 58.414 33.333 0.00 0.00 0.00 2.69
3760 8735 6.038985 TGATGCACTTTCGACATTTTTCAAA 58.961 32.000 0.00 0.00 0.00 2.69
3761 8736 6.700960 TGATGCACTTTCGACATTTTTCAAAT 59.299 30.769 0.00 0.00 0.00 2.32
3762 8737 7.864882 TGATGCACTTTCGACATTTTTCAAATA 59.135 29.630 0.00 0.00 0.00 1.40
3763 8738 7.388290 TGCACTTTCGACATTTTTCAAATAC 57.612 32.000 0.00 0.00 0.00 1.89
3764 8739 6.975197 TGCACTTTCGACATTTTTCAAATACA 59.025 30.769 0.00 0.00 0.00 2.29
3765 8740 7.651304 TGCACTTTCGACATTTTTCAAATACAT 59.349 29.630 0.00 0.00 0.00 2.29
3766 8741 8.487176 GCACTTTCGACATTTTTCAAATACATT 58.513 29.630 0.00 0.00 0.00 2.71
3771 8746 9.631452 TTCGACATTTTTCAAATACATTATGCA 57.369 25.926 0.00 0.00 0.00 3.96
3772 8747 9.071221 TCGACATTTTTCAAATACATTATGCAC 57.929 29.630 0.00 0.00 0.00 4.57
3773 8748 8.858186 CGACATTTTTCAAATACATTATGCACA 58.142 29.630 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.542915 GTTCGACTATAGCGGGCCATA 59.457 52.381 4.39 0.00 0.00 2.74
3 4 1.006454 GGTTCGACTATAGCGGGCC 60.006 63.158 13.94 0.00 0.00 5.80
4 5 1.006454 GGGTTCGACTATAGCGGGC 60.006 63.158 13.94 8.67 0.00 6.13
5 6 0.031721 GTGGGTTCGACTATAGCGGG 59.968 60.000 13.94 0.00 0.00 6.13
7 8 0.742505 TGGTGGGTTCGACTATAGCG 59.257 55.000 0.00 5.00 0.00 4.26
8 9 2.547826 GTTGGTGGGTTCGACTATAGC 58.452 52.381 0.00 0.00 0.00 2.97
11 12 1.354101 TGGTTGGTGGGTTCGACTAT 58.646 50.000 0.00 0.00 0.00 2.12
12 13 1.071071 CTTGGTTGGTGGGTTCGACTA 59.929 52.381 0.00 0.00 0.00 2.59
14 15 0.464916 ACTTGGTTGGTGGGTTCGAC 60.465 55.000 0.00 0.00 0.00 4.20
15 16 1.071071 CTACTTGGTTGGTGGGTTCGA 59.929 52.381 0.00 0.00 0.00 3.71
16 17 1.519408 CTACTTGGTTGGTGGGTTCG 58.481 55.000 0.00 0.00 0.00 3.95
17 18 1.244816 GCTACTTGGTTGGTGGGTTC 58.755 55.000 0.00 0.00 0.00 3.62
18 19 0.553819 TGCTACTTGGTTGGTGGGTT 59.446 50.000 0.00 0.00 0.00 4.11
19 20 0.110486 CTGCTACTTGGTTGGTGGGT 59.890 55.000 0.00 0.00 0.00 4.51
20 21 0.400213 TCTGCTACTTGGTTGGTGGG 59.600 55.000 0.00 0.00 0.00 4.61
21 22 1.611673 CCTCTGCTACTTGGTTGGTGG 60.612 57.143 0.00 0.00 0.00 4.61
22 23 1.072331 ACCTCTGCTACTTGGTTGGTG 59.928 52.381 0.00 0.00 0.00 4.17
23 24 1.348036 GACCTCTGCTACTTGGTTGGT 59.652 52.381 0.00 0.00 32.30 3.67
24 25 1.625818 AGACCTCTGCTACTTGGTTGG 59.374 52.381 0.00 0.00 32.30 3.77
25 26 3.409026 AAGACCTCTGCTACTTGGTTG 57.591 47.619 0.00 0.00 32.30 3.77
26 27 3.648545 AGAAAGACCTCTGCTACTTGGTT 59.351 43.478 0.00 0.00 32.30 3.67
27 28 3.243724 AGAAAGACCTCTGCTACTTGGT 58.756 45.455 0.00 0.00 35.23 3.67
29 30 4.527509 TGAGAAAGACCTCTGCTACTTG 57.472 45.455 0.00 0.00 34.38 3.16
30 31 5.552870 TTTGAGAAAGACCTCTGCTACTT 57.447 39.130 0.00 0.00 34.38 2.24
31 32 5.552870 TTTTGAGAAAGACCTCTGCTACT 57.447 39.130 0.00 0.00 34.38 2.57
61 62 1.882352 CGGCCTCTGCTACTTGGTTTT 60.882 52.381 0.00 0.00 37.74 2.43
62 63 0.321653 CGGCCTCTGCTACTTGGTTT 60.322 55.000 0.00 0.00 37.74 3.27
96 3591 4.051167 TAGGGGTCGGGCGAGACA 62.051 66.667 12.59 0.00 42.62 3.41
97 3592 3.217743 CTAGGGGTCGGGCGAGAC 61.218 72.222 3.53 3.53 40.25 3.36
107 3604 1.315216 GGGAAGAGGAGCTAGGGGT 59.685 63.158 0.00 0.00 0.00 4.95
110 3607 0.104725 ATGGGGGAAGAGGAGCTAGG 60.105 60.000 0.00 0.00 0.00 3.02
113 3610 0.990818 GGAATGGGGGAAGAGGAGCT 60.991 60.000 0.00 0.00 0.00 4.09
123 3620 2.044352 GTTGGGACGGAATGGGGG 60.044 66.667 0.00 0.00 0.00 5.40
125 3622 2.044352 GGGTTGGGACGGAATGGG 60.044 66.667 0.00 0.00 0.00 4.00
127 3624 1.677633 GTGGGGTTGGGACGGAATG 60.678 63.158 0.00 0.00 0.00 2.67
128 3625 2.761160 GTGGGGTTGGGACGGAAT 59.239 61.111 0.00 0.00 0.00 3.01
133 3630 1.835267 GTTTGGGTGGGGTTGGGAC 60.835 63.158 0.00 0.00 0.00 4.46
136 3633 2.525629 GGGTTTGGGTGGGGTTGG 60.526 66.667 0.00 0.00 0.00 3.77
137 3634 2.525629 GGGGTTTGGGTGGGGTTG 60.526 66.667 0.00 0.00 0.00 3.77
138 3635 3.036959 TGGGGTTTGGGTGGGGTT 61.037 61.111 0.00 0.00 0.00 4.11
139 3636 3.840132 GTGGGGTTTGGGTGGGGT 61.840 66.667 0.00 0.00 0.00 4.95
140 3637 4.986708 CGTGGGGTTTGGGTGGGG 62.987 72.222 0.00 0.00 0.00 4.96
323 3844 4.832608 GGAAGGCGCGGTACTGGG 62.833 72.222 14.19 14.19 0.00 4.45
709 4236 1.006571 ACGAGTACACGGTTGCCTG 60.007 57.895 16.97 0.00 37.61 4.85
1004 4531 1.349026 CCAGTGAACTGTCCTCCATGT 59.651 52.381 9.49 0.00 42.27 3.21
1164 4703 2.560542 TGTGAAACCAACCACATATGCC 59.439 45.455 1.58 0.00 38.26 4.40
1183 4722 0.832135 ATGACACCGACACCCTCTGT 60.832 55.000 0.00 0.00 34.96 3.41
1254 4793 4.275936 CCAAATTCGTCAACCTTCTTCACT 59.724 41.667 0.00 0.00 0.00 3.41
1459 5020 7.990314 ACACAAGTTTTAATTTGGCAAGGTATT 59.010 29.630 0.00 0.20 30.79 1.89
1461 5022 6.879400 ACACAAGTTTTAATTTGGCAAGGTA 58.121 32.000 0.00 0.00 30.79 3.08
1535 5097 7.775561 GGTCCTTAACAGGTCAAATCTCATAAT 59.224 37.037 0.00 0.00 41.69 1.28
1572 5411 3.160545 GCAATTCAACCAACGTGTATCG 58.839 45.455 0.00 0.00 46.00 2.92
1573 5412 3.057876 TGGCAATTCAACCAACGTGTATC 60.058 43.478 0.00 0.00 31.46 2.24
1574 5413 2.887783 TGGCAATTCAACCAACGTGTAT 59.112 40.909 0.00 0.00 31.46 2.29
1575 5414 2.298610 TGGCAATTCAACCAACGTGTA 58.701 42.857 0.00 0.00 31.46 2.90
1576 5415 1.107114 TGGCAATTCAACCAACGTGT 58.893 45.000 0.00 0.00 31.46 4.49
1577 5416 2.215907 TTGGCAATTCAACCAACGTG 57.784 45.000 0.00 0.00 40.98 4.49
1580 5419 4.694509 TGCATATTTGGCAATTCAACCAAC 59.305 37.500 0.00 0.00 45.42 3.77
1763 5655 4.422073 TGATCCGAAAAGATACCATGCT 57.578 40.909 0.00 0.00 0.00 3.79
1779 5671 3.569701 ACGGTATCAAAATGCCATGATCC 59.430 43.478 0.00 0.00 37.50 3.36
1792 5684 7.766738 TCAAGTAATATTTGCTGACGGTATCAA 59.233 33.333 0.00 0.00 36.69 2.57
1794 5686 7.709269 TCAAGTAATATTTGCTGACGGTATC 57.291 36.000 0.00 0.00 0.00 2.24
1795 5687 8.150945 AGATCAAGTAATATTTGCTGACGGTAT 58.849 33.333 0.00 0.00 0.00 2.73
1826 5718 0.465097 AACAGCAACAGCAGCAGACT 60.465 50.000 0.00 0.00 0.00 3.24
1838 5730 6.257630 GTGCCAAATCTAAAAGAAAACAGCAA 59.742 34.615 0.00 0.00 0.00 3.91
1860 5752 7.602753 AGGAAAAATAAATGACTTGGTAGTGC 58.397 34.615 0.00 0.00 33.84 4.40
1910 5803 6.322201 GGGTGAAATTGATCATAATGACCTGT 59.678 38.462 0.00 0.00 0.00 4.00
2085 5978 4.273148 AGACCAACACAGAACCTGATAC 57.727 45.455 0.45 0.00 35.18 2.24
2147 6245 6.337356 TCTCCAATTGTTTGTCCAAAAAGTC 58.663 36.000 4.43 0.00 31.33 3.01
2178 6277 7.230108 ACTGTGAAATCAAATTGTGTCTCAGAT 59.770 33.333 20.46 10.25 33.22 2.90
2185 6284 9.598517 ACATTTTACTGTGAAATCAAATTGTGT 57.401 25.926 7.49 0.40 0.00 3.72
2228 6566 7.824289 TCTGACTTCCACCTATTAGTTTCAATG 59.176 37.037 0.00 0.00 0.00 2.82
2430 6805 4.336993 ACAAAAACGTGCTAGTCCATCAAA 59.663 37.500 0.00 0.00 0.00 2.69
2445 6820 5.180377 GCATTCAAGACGAAAACAAAAACG 58.820 37.500 0.00 0.00 37.12 3.60
2446 6821 5.180377 CGCATTCAAGACGAAAACAAAAAC 58.820 37.500 0.00 0.00 37.12 2.43
2452 6828 1.971962 CTGCGCATTCAAGACGAAAAC 59.028 47.619 12.24 0.00 37.12 2.43
2536 6912 1.492764 TTCCCATCCTCTACCGTTCC 58.507 55.000 0.00 0.00 0.00 3.62
2540 6916 1.717032 TCCATTCCCATCCTCTACCG 58.283 55.000 0.00 0.00 0.00 4.02
2561 6937 5.484173 TCGACATCTTTGCATCCATTTAC 57.516 39.130 0.00 0.00 0.00 2.01
2562 6938 7.800155 TTATCGACATCTTTGCATCCATTTA 57.200 32.000 0.00 0.00 0.00 1.40
2563 6939 6.698008 TTATCGACATCTTTGCATCCATTT 57.302 33.333 0.00 0.00 0.00 2.32
2566 6942 7.984422 ATATTTATCGACATCTTTGCATCCA 57.016 32.000 0.00 0.00 0.00 3.41
2567 6943 8.292448 ACAATATTTATCGACATCTTTGCATCC 58.708 33.333 0.00 0.00 0.00 3.51
2672 7508 9.431887 CACCTAAACTTAGCATTTTACAGTCTA 57.568 33.333 0.00 0.00 0.00 2.59
2712 7548 0.882484 TGAAAAGACGGCATGCACGA 60.882 50.000 27.68 7.44 34.93 4.35
2713 7549 0.453282 CTGAAAAGACGGCATGCACG 60.453 55.000 21.36 21.64 37.36 5.34
2722 7558 2.030540 TCTACCACGGTCTGAAAAGACG 60.031 50.000 0.00 0.00 39.57 4.18
2723 7559 3.655276 TCTACCACGGTCTGAAAAGAC 57.345 47.619 0.00 0.00 38.04 3.01
2911 7823 4.327357 CACCAGTCATGCTTTAACTACTCG 59.673 45.833 0.00 0.00 0.00 4.18
2968 7908 1.405821 GACCTGTGACCAGAGGATACG 59.594 57.143 18.58 0.00 44.04 3.06
3015 7955 4.019860 ACTTTGAAATCAGAGCTGGCTAGA 60.020 41.667 0.00 0.00 31.90 2.43
3021 7961 8.295288 ACATTTCTTACTTTGAAATCAGAGCTG 58.705 33.333 0.00 0.00 40.76 4.24
3072 8013 1.979155 CCTCAGTGGCTCTCGGACA 60.979 63.158 0.00 0.00 0.00 4.02
3077 8018 2.289945 ACAATTGACCTCAGTGGCTCTC 60.290 50.000 13.59 0.00 40.22 3.20
3083 8024 3.415212 ACATCCACAATTGACCTCAGTG 58.585 45.455 13.59 0.00 0.00 3.66
3096 8061 6.434596 CACGAATTCAACTAAAACATCCACA 58.565 36.000 6.22 0.00 0.00 4.17
3137 8102 6.952773 TTTGATGCTTGTACAACCTTTAGT 57.047 33.333 3.59 0.00 0.00 2.24
3161 8126 6.549364 TGAAATATCAAATATGCCCCGACTTT 59.451 34.615 0.00 0.00 30.99 2.66
3163 8128 5.630121 TGAAATATCAAATATGCCCCGACT 58.370 37.500 0.00 0.00 30.99 4.18
3165 8130 5.630121 ACTGAAATATCAAATATGCCCCGA 58.370 37.500 0.00 0.00 34.49 5.14
3181 8146 6.581712 ACATTAACCAAACAGCAACTGAAAT 58.418 32.000 0.78 0.00 35.18 2.17
3209 8174 2.029470 CCACATAGTAGCCTAGCTCAGC 60.029 54.545 0.00 0.00 40.44 4.26
3238 8203 4.225942 TCCAGGATAGAACAGCAACAGATT 59.774 41.667 0.00 0.00 0.00 2.40
3239 8204 3.776969 TCCAGGATAGAACAGCAACAGAT 59.223 43.478 0.00 0.00 0.00 2.90
3240 8205 3.173151 TCCAGGATAGAACAGCAACAGA 58.827 45.455 0.00 0.00 0.00 3.41
3241 8206 3.616956 TCCAGGATAGAACAGCAACAG 57.383 47.619 0.00 0.00 0.00 3.16
3242 8207 4.202461 ACTTTCCAGGATAGAACAGCAACA 60.202 41.667 13.54 0.00 0.00 3.33
3243 8208 4.327680 ACTTTCCAGGATAGAACAGCAAC 58.672 43.478 13.54 0.00 0.00 4.17
3244 8209 4.640771 ACTTTCCAGGATAGAACAGCAA 57.359 40.909 13.54 0.00 0.00 3.91
3245 8210 4.287067 AGAACTTTCCAGGATAGAACAGCA 59.713 41.667 13.54 0.00 0.00 4.41
3319 8294 2.096248 TGCTAACTATTTTTGCCCCCG 58.904 47.619 0.00 0.00 0.00 5.73
3322 8297 4.122143 TGCATGCTAACTATTTTTGCCC 57.878 40.909 20.33 0.00 0.00 5.36
3337 8312 0.385974 GTGACAAGACGGTTGCATGC 60.386 55.000 11.82 11.82 0.00 4.06
3358 8333 2.220133 ACACAAAATGCGACGTAGACAC 59.780 45.455 0.00 0.00 0.00 3.67
3359 8334 2.475818 ACACAAAATGCGACGTAGACA 58.524 42.857 0.00 0.00 0.00 3.41
3360 8335 3.215244 CAACACAAAATGCGACGTAGAC 58.785 45.455 0.00 0.00 0.00 2.59
3361 8336 2.867368 ACAACACAAAATGCGACGTAGA 59.133 40.909 0.00 0.00 0.00 2.59
3362 8337 3.247563 ACAACACAAAATGCGACGTAG 57.752 42.857 0.00 0.00 0.00 3.51
3363 8338 3.063588 TGAACAACACAAAATGCGACGTA 59.936 39.130 0.00 0.00 0.00 3.57
3364 8339 2.159503 TGAACAACACAAAATGCGACGT 60.160 40.909 0.00 0.00 0.00 4.34
3365 8340 2.445316 TGAACAACACAAAATGCGACG 58.555 42.857 0.00 0.00 0.00 5.12
3376 8351 1.531058 GGAAGCACACGTGAACAACAC 60.531 52.381 25.01 6.93 45.11 3.32
3377 8352 0.730265 GGAAGCACACGTGAACAACA 59.270 50.000 25.01 0.00 0.00 3.33
3378 8353 1.014352 AGGAAGCACACGTGAACAAC 58.986 50.000 25.01 10.11 0.00 3.32
3379 8354 1.013596 CAGGAAGCACACGTGAACAA 58.986 50.000 25.01 0.00 0.00 2.83
3380 8355 0.176910 TCAGGAAGCACACGTGAACA 59.823 50.000 25.01 0.00 30.96 3.18
3381 8356 0.582005 GTCAGGAAGCACACGTGAAC 59.418 55.000 25.01 13.53 34.73 3.18
3382 8357 0.176910 TGTCAGGAAGCACACGTGAA 59.823 50.000 25.01 0.00 34.73 3.18
3383 8358 0.249447 CTGTCAGGAAGCACACGTGA 60.249 55.000 25.01 0.00 0.00 4.35
3384 8359 0.530650 ACTGTCAGGAAGCACACGTG 60.531 55.000 15.48 15.48 0.00 4.49
3385 8360 0.530650 CACTGTCAGGAAGCACACGT 60.531 55.000 4.53 0.00 0.00 4.49
3386 8361 0.249447 TCACTGTCAGGAAGCACACG 60.249 55.000 4.53 0.00 0.00 4.49
3387 8362 1.599542 GTTCACTGTCAGGAAGCACAC 59.400 52.381 4.53 0.00 0.00 3.82
3388 8363 1.209261 TGTTCACTGTCAGGAAGCACA 59.791 47.619 4.53 0.00 0.00 4.57
3389 8364 1.953559 TGTTCACTGTCAGGAAGCAC 58.046 50.000 4.53 0.00 0.00 4.40
3390 8365 2.288666 GTTGTTCACTGTCAGGAAGCA 58.711 47.619 4.53 0.00 0.00 3.91
3391 8366 1.261619 CGTTGTTCACTGTCAGGAAGC 59.738 52.381 4.53 0.00 0.00 3.86
3392 8367 1.867233 CCGTTGTTCACTGTCAGGAAG 59.133 52.381 4.53 0.00 0.00 3.46
3393 8368 1.948104 CCGTTGTTCACTGTCAGGAA 58.052 50.000 4.53 2.47 0.00 3.36
3394 8369 0.531974 GCCGTTGTTCACTGTCAGGA 60.532 55.000 4.53 0.00 0.00 3.86
3395 8370 0.532862 AGCCGTTGTTCACTGTCAGG 60.533 55.000 4.53 0.00 0.00 3.86
3396 8371 0.583438 CAGCCGTTGTTCACTGTCAG 59.417 55.000 0.00 0.00 0.00 3.51
3397 8372 1.436195 GCAGCCGTTGTTCACTGTCA 61.436 55.000 0.00 0.00 32.65 3.58
3398 8373 1.279840 GCAGCCGTTGTTCACTGTC 59.720 57.895 0.00 0.00 32.65 3.51
3399 8374 2.186826 GGCAGCCGTTGTTCACTGT 61.187 57.895 0.00 0.00 32.65 3.55
3400 8375 1.845809 GAGGCAGCCGTTGTTCACTG 61.846 60.000 5.55 0.00 0.00 3.66
3401 8376 1.598130 GAGGCAGCCGTTGTTCACT 60.598 57.895 5.55 0.00 0.00 3.41
3402 8377 1.166531 AAGAGGCAGCCGTTGTTCAC 61.167 55.000 5.55 0.00 0.00 3.18
3403 8378 0.465460 AAAGAGGCAGCCGTTGTTCA 60.465 50.000 5.55 0.00 0.00 3.18
3404 8379 0.040067 CAAAGAGGCAGCCGTTGTTC 60.040 55.000 5.55 0.00 0.00 3.18
3405 8380 0.751643 ACAAAGAGGCAGCCGTTGTT 60.752 50.000 19.82 6.22 28.69 2.83
3406 8381 0.107831 TACAAAGAGGCAGCCGTTGT 59.892 50.000 25.37 25.37 34.28 3.32
3407 8382 1.453155 ATACAAAGAGGCAGCCGTTG 58.547 50.000 18.79 18.79 0.00 4.10
3408 8383 3.343941 TTATACAAAGAGGCAGCCGTT 57.656 42.857 5.55 0.28 0.00 4.44
3409 8384 3.560636 ATTATACAAAGAGGCAGCCGT 57.439 42.857 5.55 0.00 0.00 5.68
3410 8385 4.084537 CGTTATTATACAAAGAGGCAGCCG 60.085 45.833 5.55 0.00 0.00 5.52
3411 8386 4.319549 GCGTTATTATACAAAGAGGCAGCC 60.320 45.833 1.84 1.84 0.00 4.85
3412 8387 4.608445 CGCGTTATTATACAAAGAGGCAGC 60.608 45.833 0.00 0.00 0.00 5.25
3413 8388 4.608445 GCGCGTTATTATACAAAGAGGCAG 60.608 45.833 8.43 0.00 0.00 4.85
3414 8389 3.246699 GCGCGTTATTATACAAAGAGGCA 59.753 43.478 8.43 0.00 0.00 4.75
3415 8390 3.493503 AGCGCGTTATTATACAAAGAGGC 59.506 43.478 8.43 0.00 0.00 4.70
3416 8391 4.150098 GGAGCGCGTTATTATACAAAGAGG 59.850 45.833 8.43 0.00 0.00 3.69
3417 8392 4.743151 TGGAGCGCGTTATTATACAAAGAG 59.257 41.667 8.43 0.00 0.00 2.85
3418 8393 4.505191 GTGGAGCGCGTTATTATACAAAGA 59.495 41.667 8.43 0.00 0.00 2.52
3419 8394 4.318546 GGTGGAGCGCGTTATTATACAAAG 60.319 45.833 8.43 0.00 0.00 2.77
3420 8395 3.556775 GGTGGAGCGCGTTATTATACAAA 59.443 43.478 8.43 0.00 0.00 2.83
3421 8396 3.125316 GGTGGAGCGCGTTATTATACAA 58.875 45.455 8.43 0.00 0.00 2.41
3422 8397 2.101082 TGGTGGAGCGCGTTATTATACA 59.899 45.455 8.43 0.00 0.00 2.29
3423 8398 2.473984 GTGGTGGAGCGCGTTATTATAC 59.526 50.000 8.43 0.00 0.00 1.47
3424 8399 2.363038 AGTGGTGGAGCGCGTTATTATA 59.637 45.455 8.43 0.00 0.00 0.98
3425 8400 1.138266 AGTGGTGGAGCGCGTTATTAT 59.862 47.619 8.43 0.00 0.00 1.28
3426 8401 0.533491 AGTGGTGGAGCGCGTTATTA 59.467 50.000 8.43 0.00 0.00 0.98
3427 8402 0.321298 AAGTGGTGGAGCGCGTTATT 60.321 50.000 8.43 0.00 0.00 1.40
3428 8403 1.019278 CAAGTGGTGGAGCGCGTTAT 61.019 55.000 8.43 0.00 0.00 1.89
3429 8404 1.666553 CAAGTGGTGGAGCGCGTTA 60.667 57.895 8.43 0.00 0.00 3.18
3430 8405 2.972505 CAAGTGGTGGAGCGCGTT 60.973 61.111 8.43 0.00 0.00 4.84
3435 8410 2.031163 ACTCGCAAGTGGTGGAGC 59.969 61.111 0.00 0.00 33.32 4.70
3443 8418 2.135139 CACACACATACACTCGCAAGT 58.865 47.619 0.00 0.00 35.60 3.16
3444 8419 2.403259 TCACACACATACACTCGCAAG 58.597 47.619 0.00 0.00 0.00 4.01
3445 8420 2.035321 TCTCACACACATACACTCGCAA 59.965 45.455 0.00 0.00 0.00 4.85
3446 8421 1.611491 TCTCACACACATACACTCGCA 59.389 47.619 0.00 0.00 0.00 5.10
3447 8422 2.095212 TCTCTCACACACATACACTCGC 60.095 50.000 0.00 0.00 0.00 5.03
3448 8423 3.831715 TCTCTCACACACATACACTCG 57.168 47.619 0.00 0.00 0.00 4.18
3449 8424 4.871513 TGTTCTCTCACACACATACACTC 58.128 43.478 0.00 0.00 0.00 3.51
3450 8425 4.937201 TGTTCTCTCACACACATACACT 57.063 40.909 0.00 0.00 0.00 3.55
3451 8426 5.984233 TTTGTTCTCTCACACACATACAC 57.016 39.130 0.00 0.00 0.00 2.90
3452 8427 5.049474 GCATTTGTTCTCTCACACACATACA 60.049 40.000 0.00 0.00 0.00 2.29
3453 8428 5.385617 GCATTTGTTCTCTCACACACATAC 58.614 41.667 0.00 0.00 0.00 2.39
3454 8429 4.152223 CGCATTTGTTCTCTCACACACATA 59.848 41.667 0.00 0.00 0.00 2.29
3455 8430 3.058708 CGCATTTGTTCTCTCACACACAT 60.059 43.478 0.00 0.00 0.00 3.21
3456 8431 2.287644 CGCATTTGTTCTCTCACACACA 59.712 45.455 0.00 0.00 0.00 3.72
3457 8432 2.287915 ACGCATTTGTTCTCTCACACAC 59.712 45.455 0.00 0.00 0.00 3.82
3458 8433 2.287644 CACGCATTTGTTCTCTCACACA 59.712 45.455 0.00 0.00 0.00 3.72
3459 8434 2.908634 CACGCATTTGTTCTCTCACAC 58.091 47.619 0.00 0.00 0.00 3.82
3460 8435 1.264020 GCACGCATTTGTTCTCTCACA 59.736 47.619 0.00 0.00 0.00 3.58
3461 8436 1.722751 CGCACGCATTTGTTCTCTCAC 60.723 52.381 0.00 0.00 0.00 3.51
3462 8437 0.512518 CGCACGCATTTGTTCTCTCA 59.487 50.000 0.00 0.00 0.00 3.27
3463 8438 0.790866 GCGCACGCATTTGTTCTCTC 60.791 55.000 10.65 0.00 41.49 3.20
3464 8439 1.207593 GCGCACGCATTTGTTCTCT 59.792 52.632 10.65 0.00 41.49 3.10
3465 8440 2.139811 CGCGCACGCATTTGTTCTC 61.140 57.895 16.04 0.00 42.06 2.87
3466 8441 2.127270 CGCGCACGCATTTGTTCT 60.127 55.556 16.04 0.00 42.06 3.01
3467 8442 2.426752 ACGCGCACGCATTTGTTC 60.427 55.556 16.04 0.00 45.53 3.18
3468 8443 2.725450 CACGCGCACGCATTTGTT 60.725 55.556 16.04 0.00 45.53 2.83
3469 8444 3.947841 ACACGCGCACGCATTTGT 61.948 55.556 16.04 11.40 45.53 2.83
3470 8445 3.451828 CACACGCGCACGCATTTG 61.452 61.111 16.04 10.78 45.53 2.32
3471 8446 3.947841 ACACACGCGCACGCATTT 61.948 55.556 16.04 0.00 45.53 2.32
3472 8447 4.664864 CACACACGCGCACGCATT 62.665 61.111 16.04 0.00 45.53 3.56
3482 8457 2.356313 AGAAGAGGCGCACACACG 60.356 61.111 10.83 0.00 0.00 4.49
3483 8458 0.601311 AAGAGAAGAGGCGCACACAC 60.601 55.000 10.83 0.00 0.00 3.82
3484 8459 0.106708 AAAGAGAAGAGGCGCACACA 59.893 50.000 10.83 0.00 0.00 3.72
3485 8460 0.514691 CAAAGAGAAGAGGCGCACAC 59.485 55.000 10.83 0.00 0.00 3.82
3486 8461 0.106708 ACAAAGAGAAGAGGCGCACA 59.893 50.000 10.83 0.00 0.00 4.57
3487 8462 2.080286 TACAAAGAGAAGAGGCGCAC 57.920 50.000 10.83 2.06 0.00 5.34
3488 8463 3.181475 CCTATACAAAGAGAAGAGGCGCA 60.181 47.826 10.83 0.00 0.00 6.09
3489 8464 3.068307 TCCTATACAAAGAGAAGAGGCGC 59.932 47.826 0.00 0.00 0.00 6.53
3490 8465 4.920640 TCCTATACAAAGAGAAGAGGCG 57.079 45.455 0.00 0.00 0.00 5.52
3491 8466 7.608376 ACTTTTTCCTATACAAAGAGAAGAGGC 59.392 37.037 0.00 0.00 32.73 4.70
3492 8467 9.157104 GACTTTTTCCTATACAAAGAGAAGAGG 57.843 37.037 0.00 0.00 32.73 3.69
3493 8468 9.157104 GGACTTTTTCCTATACAAAGAGAAGAG 57.843 37.037 0.00 0.00 41.95 2.85
3494 8469 7.817962 CGGACTTTTTCCTATACAAAGAGAAGA 59.182 37.037 0.00 0.00 43.25 2.87
3495 8470 7.817962 TCGGACTTTTTCCTATACAAAGAGAAG 59.182 37.037 0.00 0.00 43.25 2.85
3496 8471 7.673180 TCGGACTTTTTCCTATACAAAGAGAA 58.327 34.615 0.00 0.00 43.25 2.87
3497 8472 7.235935 TCGGACTTTTTCCTATACAAAGAGA 57.764 36.000 0.00 0.00 43.25 3.10
3498 8473 7.900782 TTCGGACTTTTTCCTATACAAAGAG 57.099 36.000 0.00 0.00 43.25 2.85
3499 8474 8.857694 ATTTCGGACTTTTTCCTATACAAAGA 57.142 30.769 0.00 0.00 43.25 2.52
3503 8478 8.949177 GGTTTATTTCGGACTTTTTCCTATACA 58.051 33.333 0.00 0.00 43.25 2.29
3504 8479 9.170734 AGGTTTATTTCGGACTTTTTCCTATAC 57.829 33.333 0.00 0.00 43.25 1.47
3505 8480 9.743581 AAGGTTTATTTCGGACTTTTTCCTATA 57.256 29.630 0.00 0.00 43.25 1.31
3506 8481 8.520351 CAAGGTTTATTTCGGACTTTTTCCTAT 58.480 33.333 0.00 0.00 43.25 2.57
3507 8482 7.720515 TCAAGGTTTATTTCGGACTTTTTCCTA 59.279 33.333 0.00 0.00 43.25 2.94
3508 8483 6.548251 TCAAGGTTTATTTCGGACTTTTTCCT 59.452 34.615 0.00 0.00 43.25 3.36
3509 8484 6.741109 TCAAGGTTTATTTCGGACTTTTTCC 58.259 36.000 0.00 0.00 41.75 3.13
3510 8485 6.362551 GCTCAAGGTTTATTTCGGACTTTTTC 59.637 38.462 0.00 0.00 0.00 2.29
3511 8486 6.040504 AGCTCAAGGTTTATTTCGGACTTTTT 59.959 34.615 0.00 0.00 0.00 1.94
3512 8487 5.535030 AGCTCAAGGTTTATTTCGGACTTTT 59.465 36.000 0.00 0.00 0.00 2.27
3513 8488 5.070685 AGCTCAAGGTTTATTTCGGACTTT 58.929 37.500 0.00 0.00 0.00 2.66
3514 8489 4.652822 AGCTCAAGGTTTATTTCGGACTT 58.347 39.130 0.00 0.00 0.00 3.01
3515 8490 4.254492 GAGCTCAAGGTTTATTTCGGACT 58.746 43.478 9.40 0.00 0.00 3.85
3516 8491 3.062234 CGAGCTCAAGGTTTATTTCGGAC 59.938 47.826 15.40 0.00 0.00 4.79
3517 8492 3.259064 CGAGCTCAAGGTTTATTTCGGA 58.741 45.455 15.40 0.00 0.00 4.55
3518 8493 3.000727 ACGAGCTCAAGGTTTATTTCGG 58.999 45.455 15.40 0.00 0.00 4.30
3519 8494 4.267928 CCTACGAGCTCAAGGTTTATTTCG 59.732 45.833 19.61 3.22 0.00 3.46
3520 8495 4.034163 GCCTACGAGCTCAAGGTTTATTTC 59.966 45.833 25.45 9.72 32.67 2.17
3521 8496 3.939592 GCCTACGAGCTCAAGGTTTATTT 59.060 43.478 25.45 0.00 32.67 1.40
3522 8497 3.532542 GCCTACGAGCTCAAGGTTTATT 58.467 45.455 25.45 0.00 32.67 1.40
3523 8498 2.481449 CGCCTACGAGCTCAAGGTTTAT 60.481 50.000 25.45 1.31 43.93 1.40
3524 8499 1.135199 CGCCTACGAGCTCAAGGTTTA 60.135 52.381 25.45 3.81 43.93 2.01
3525 8500 0.389948 CGCCTACGAGCTCAAGGTTT 60.390 55.000 25.45 2.93 43.93 3.27
3526 8501 1.215647 CGCCTACGAGCTCAAGGTT 59.784 57.895 25.45 4.47 43.93 3.50
3527 8502 1.533469 AACGCCTACGAGCTCAAGGT 61.533 55.000 25.45 14.07 43.93 3.50
3528 8503 0.389948 AAACGCCTACGAGCTCAAGG 60.390 55.000 22.36 22.36 43.93 3.61
3529 8504 1.390463 GAAAACGCCTACGAGCTCAAG 59.610 52.381 15.40 10.21 43.93 3.02
3530 8505 1.269883 TGAAAACGCCTACGAGCTCAA 60.270 47.619 15.40 0.00 43.93 3.02
3531 8506 0.315886 TGAAAACGCCTACGAGCTCA 59.684 50.000 15.40 0.00 43.93 4.26
3532 8507 1.641577 ATGAAAACGCCTACGAGCTC 58.358 50.000 2.73 2.73 43.93 4.09
3533 8508 2.094762 AATGAAAACGCCTACGAGCT 57.905 45.000 0.00 0.00 43.93 4.09
3534 8509 2.894307 AAATGAAAACGCCTACGAGC 57.106 45.000 0.00 0.00 43.93 5.03
3535 8510 6.539324 TGAATAAAATGAAAACGCCTACGAG 58.461 36.000 0.00 0.00 43.93 4.18
3536 8511 6.483385 TGAATAAAATGAAAACGCCTACGA 57.517 33.333 0.00 0.00 43.93 3.43
3538 8513 9.952341 GAAAATGAATAAAATGAAAACGCCTAC 57.048 29.630 0.00 0.00 0.00 3.18
3539 8514 9.921637 AGAAAATGAATAAAATGAAAACGCCTA 57.078 25.926 0.00 0.00 0.00 3.93
3540 8515 8.711457 CAGAAAATGAATAAAATGAAAACGCCT 58.289 29.630 0.00 0.00 0.00 5.52
3541 8516 8.495148 ACAGAAAATGAATAAAATGAAAACGCC 58.505 29.630 0.00 0.00 0.00 5.68
3542 8517 9.516091 GACAGAAAATGAATAAAATGAAAACGC 57.484 29.630 0.00 0.00 0.00 4.84
3543 8518 9.712410 CGACAGAAAATGAATAAAATGAAAACG 57.288 29.630 0.00 0.00 0.00 3.60
3551 8526 9.810545 AGGAAAAACGACAGAAAATGAATAAAA 57.189 25.926 0.00 0.00 0.00 1.52
3552 8527 9.810545 AAGGAAAAACGACAGAAAATGAATAAA 57.189 25.926 0.00 0.00 0.00 1.40
3553 8528 9.458374 GAAGGAAAAACGACAGAAAATGAATAA 57.542 29.630 0.00 0.00 0.00 1.40
3554 8529 8.625651 TGAAGGAAAAACGACAGAAAATGAATA 58.374 29.630 0.00 0.00 0.00 1.75
3555 8530 7.488322 TGAAGGAAAAACGACAGAAAATGAAT 58.512 30.769 0.00 0.00 0.00 2.57
3556 8531 6.857956 TGAAGGAAAAACGACAGAAAATGAA 58.142 32.000 0.00 0.00 0.00 2.57
3557 8532 6.443934 TGAAGGAAAAACGACAGAAAATGA 57.556 33.333 0.00 0.00 0.00 2.57
3558 8533 6.697019 ACATGAAGGAAAAACGACAGAAAATG 59.303 34.615 0.00 0.00 0.00 2.32
3559 8534 6.805713 ACATGAAGGAAAAACGACAGAAAAT 58.194 32.000 0.00 0.00 0.00 1.82
3560 8535 6.202516 ACATGAAGGAAAAACGACAGAAAA 57.797 33.333 0.00 0.00 0.00 2.29
3561 8536 5.828299 ACATGAAGGAAAAACGACAGAAA 57.172 34.783 0.00 0.00 0.00 2.52
3562 8537 5.828299 AACATGAAGGAAAAACGACAGAA 57.172 34.783 0.00 0.00 0.00 3.02
3563 8538 5.828299 AAACATGAAGGAAAAACGACAGA 57.172 34.783 0.00 0.00 0.00 3.41
3564 8539 6.265577 AGAAAACATGAAGGAAAAACGACAG 58.734 36.000 0.00 0.00 0.00 3.51
3565 8540 6.202516 AGAAAACATGAAGGAAAAACGACA 57.797 33.333 0.00 0.00 0.00 4.35
3566 8541 7.520119 AAAGAAAACATGAAGGAAAAACGAC 57.480 32.000 0.00 0.00 0.00 4.34
3575 8550 9.754382 CCAATGGATATAAAGAAAACATGAAGG 57.246 33.333 0.00 0.00 0.00 3.46
3585 8560 8.682710 CCGAAGAAAACCAATGGATATAAAGAA 58.317 33.333 6.16 0.00 0.00 2.52
3586 8561 7.832187 ACCGAAGAAAACCAATGGATATAAAGA 59.168 33.333 6.16 0.00 0.00 2.52
3587 8562 7.996385 ACCGAAGAAAACCAATGGATATAAAG 58.004 34.615 6.16 0.00 0.00 1.85
3588 8563 7.948034 ACCGAAGAAAACCAATGGATATAAA 57.052 32.000 6.16 0.00 0.00 1.40
3589 8564 7.948034 AACCGAAGAAAACCAATGGATATAA 57.052 32.000 6.16 0.00 0.00 0.98
3590 8565 7.948034 AAACCGAAGAAAACCAATGGATATA 57.052 32.000 6.16 0.00 0.00 0.86
3591 8566 6.850752 AAACCGAAGAAAACCAATGGATAT 57.149 33.333 6.16 0.00 0.00 1.63
3592 8567 6.658188 AAAACCGAAGAAAACCAATGGATA 57.342 33.333 6.16 0.00 0.00 2.59
3593 8568 5.545063 AAAACCGAAGAAAACCAATGGAT 57.455 34.783 6.16 0.00 0.00 3.41
3594 8569 5.346181 AAAAACCGAAGAAAACCAATGGA 57.654 34.783 6.16 0.00 0.00 3.41
3615 8590 9.838339 TGAAAAACAAAATATAGCAAAGGGAAA 57.162 25.926 0.00 0.00 0.00 3.13
3616 8591 9.838339 TTGAAAAACAAAATATAGCAAAGGGAA 57.162 25.926 0.00 0.00 35.39 3.97
3617 8592 9.838339 TTTGAAAAACAAAATATAGCAAAGGGA 57.162 25.926 0.00 0.00 44.16 4.20
3638 8613 9.980780 CGTGACAATGTACATAATGTATTTGAA 57.019 29.630 9.21 0.00 35.05 2.69
3639 8614 8.119845 GCGTGACAATGTACATAATGTATTTGA 58.880 33.333 9.21 0.00 35.05 2.69
3640 8615 8.122330 AGCGTGACAATGTACATAATGTATTTG 58.878 33.333 9.21 4.44 35.05 2.32
3641 8616 8.208718 AGCGTGACAATGTACATAATGTATTT 57.791 30.769 9.21 0.00 35.05 1.40
3642 8617 7.710907 AGAGCGTGACAATGTACATAATGTATT 59.289 33.333 9.21 0.00 35.05 1.89
3643 8618 7.169813 CAGAGCGTGACAATGTACATAATGTAT 59.830 37.037 9.21 0.00 35.05 2.29
3644 8619 6.475402 CAGAGCGTGACAATGTACATAATGTA 59.525 38.462 9.21 0.00 0.00 2.29
3645 8620 5.291858 CAGAGCGTGACAATGTACATAATGT 59.708 40.000 9.21 10.84 0.00 2.71
3646 8621 5.731278 CAGAGCGTGACAATGTACATAATG 58.269 41.667 9.21 7.39 0.00 1.90
3647 8622 4.271049 GCAGAGCGTGACAATGTACATAAT 59.729 41.667 9.21 0.00 0.00 1.28
3648 8623 3.616821 GCAGAGCGTGACAATGTACATAA 59.383 43.478 9.21 0.00 0.00 1.90
3649 8624 3.186909 GCAGAGCGTGACAATGTACATA 58.813 45.455 9.21 0.00 0.00 2.29
3650 8625 2.002586 GCAGAGCGTGACAATGTACAT 58.997 47.619 1.41 1.41 0.00 2.29
3651 8626 1.428448 GCAGAGCGTGACAATGTACA 58.572 50.000 0.00 0.00 0.00 2.90
3652 8627 0.721718 GGCAGAGCGTGACAATGTAC 59.278 55.000 0.00 0.00 32.31 2.90
3653 8628 0.320050 TGGCAGAGCGTGACAATGTA 59.680 50.000 0.00 0.00 43.32 2.29
3654 8629 1.071299 TGGCAGAGCGTGACAATGT 59.929 52.632 0.00 0.00 43.32 2.71
3655 8630 3.970721 TGGCAGAGCGTGACAATG 58.029 55.556 0.00 0.00 43.32 2.82
3663 8638 2.860628 GCGTAACGATGGCAGAGCG 61.861 63.158 0.00 0.00 40.13 5.03
3664 8639 1.084370 AAGCGTAACGATGGCAGAGC 61.084 55.000 0.00 0.00 0.00 4.09
3665 8640 1.324736 GAAAGCGTAACGATGGCAGAG 59.675 52.381 0.00 0.00 0.00 3.35
3666 8641 1.337354 TGAAAGCGTAACGATGGCAGA 60.337 47.619 0.00 0.00 0.00 4.26
3667 8642 1.075542 TGAAAGCGTAACGATGGCAG 58.924 50.000 0.00 0.00 0.00 4.85
3668 8643 1.195900 GTTGAAAGCGTAACGATGGCA 59.804 47.619 0.00 0.00 0.00 4.92
3669 8644 1.195900 TGTTGAAAGCGTAACGATGGC 59.804 47.619 0.00 0.00 0.00 4.40
3670 8645 3.740044 ATGTTGAAAGCGTAACGATGG 57.260 42.857 0.00 0.00 0.00 3.51
3671 8646 6.141527 TGAAAAATGTTGAAAGCGTAACGATG 59.858 34.615 0.00 0.00 0.00 3.84
3672 8647 6.202937 TGAAAAATGTTGAAAGCGTAACGAT 58.797 32.000 0.00 0.00 0.00 3.73
3673 8648 5.570344 TGAAAAATGTTGAAAGCGTAACGA 58.430 33.333 0.00 0.00 0.00 3.85
3674 8649 5.858159 TGAAAAATGTTGAAAGCGTAACG 57.142 34.783 0.00 0.00 0.00 3.18
3702 8677 9.519191 TTTCATGTGCCTGCTAATGTATATAAT 57.481 29.630 0.00 0.00 0.00 1.28
3703 8678 8.783093 GTTTCATGTGCCTGCTAATGTATATAA 58.217 33.333 0.00 0.00 0.00 0.98
3704 8679 7.936301 TGTTTCATGTGCCTGCTAATGTATATA 59.064 33.333 0.00 0.00 0.00 0.86
3705 8680 6.772233 TGTTTCATGTGCCTGCTAATGTATAT 59.228 34.615 0.00 0.00 0.00 0.86
3706 8681 6.118852 TGTTTCATGTGCCTGCTAATGTATA 58.881 36.000 0.00 0.00 0.00 1.47
3707 8682 4.949238 TGTTTCATGTGCCTGCTAATGTAT 59.051 37.500 0.00 0.00 0.00 2.29
3708 8683 4.331108 TGTTTCATGTGCCTGCTAATGTA 58.669 39.130 0.00 0.00 0.00 2.29
3709 8684 3.156293 TGTTTCATGTGCCTGCTAATGT 58.844 40.909 0.00 0.00 0.00 2.71
3710 8685 3.853831 TGTTTCATGTGCCTGCTAATG 57.146 42.857 0.00 0.00 0.00 1.90
3711 8686 5.410355 AAATGTTTCATGTGCCTGCTAAT 57.590 34.783 0.00 0.00 0.00 1.73
3712 8687 4.870123 AAATGTTTCATGTGCCTGCTAA 57.130 36.364 0.00 0.00 0.00 3.09
3713 8688 4.870123 AAAATGTTTCATGTGCCTGCTA 57.130 36.364 0.00 0.00 0.00 3.49
3714 8689 3.756933 AAAATGTTTCATGTGCCTGCT 57.243 38.095 0.00 0.00 0.00 4.24
3732 8707 6.900568 AAAATGTCGAAAGTGCATCAAAAA 57.099 29.167 0.00 0.00 0.00 1.94
3733 8708 6.533012 TGAAAAATGTCGAAAGTGCATCAAAA 59.467 30.769 0.00 0.00 0.00 2.44
3734 8709 6.038985 TGAAAAATGTCGAAAGTGCATCAAA 58.961 32.000 0.00 0.00 0.00 2.69
3735 8710 5.586339 TGAAAAATGTCGAAAGTGCATCAA 58.414 33.333 0.00 0.00 0.00 2.57
3736 8711 5.180367 TGAAAAATGTCGAAAGTGCATCA 57.820 34.783 0.00 0.00 0.00 3.07
3737 8712 6.509317 TTTGAAAAATGTCGAAAGTGCATC 57.491 33.333 0.00 0.00 0.00 3.91
3738 8713 7.651304 TGTATTTGAAAAATGTCGAAAGTGCAT 59.349 29.630 0.00 0.00 0.00 3.96
3739 8714 6.975197 TGTATTTGAAAAATGTCGAAAGTGCA 59.025 30.769 0.00 0.00 0.00 4.57
3740 8715 7.388290 TGTATTTGAAAAATGTCGAAAGTGC 57.612 32.000 0.00 0.00 0.00 4.40
3745 8720 9.631452 TGCATAATGTATTTGAAAAATGTCGAA 57.369 25.926 0.00 0.00 0.00 3.71
3746 8721 9.071221 GTGCATAATGTATTTGAAAAATGTCGA 57.929 29.630 0.00 0.00 0.00 4.20
3747 8722 8.858186 TGTGCATAATGTATTTGAAAAATGTCG 58.142 29.630 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.