Multiple sequence alignment - TraesCS6B01G084700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G084700 chr6B 100.000 2448 0 0 223 2670 61796882 61794435 0.000000e+00 4521.0
1 TraesCS6B01G084700 chr6B 94.215 968 47 7 1046 2007 58777809 58778773 0.000000e+00 1469.0
2 TraesCS6B01G084700 chr6B 84.303 1134 123 36 779 1890 58309737 58310837 0.000000e+00 1057.0
3 TraesCS6B01G084700 chr6B 94.759 477 23 2 1047 1523 59026383 59026857 0.000000e+00 741.0
4 TraesCS6B01G084700 chr6B 89.286 112 12 0 1583 1694 59026859 59026970 9.970000e-30 141.0
5 TraesCS6B01G084700 chr6B 100.000 45 0 0 1 45 61797104 61797060 1.700000e-12 84.2
6 TraesCS6B01G084700 chr6D 86.771 703 61 21 779 1475 29392187 29391511 0.000000e+00 754.0
7 TraesCS6B01G084700 chr6D 96.767 433 14 0 1041 1473 28688065 28688497 0.000000e+00 723.0
8 TraesCS6B01G084700 chr6D 92.830 265 18 1 2033 2297 28689946 28690209 1.500000e-102 383.0
9 TraesCS6B01G084700 chr6D 87.296 307 32 3 1609 1910 28688569 28688873 7.080000e-91 344.0
10 TraesCS6B01G084700 chr6D 80.082 487 75 17 230 708 28687142 28687614 2.550000e-90 342.0
11 TraesCS6B01G084700 chr6D 78.917 351 52 13 1539 1872 29391491 29391146 4.480000e-53 219.0
12 TraesCS6B01G084700 chr6A 85.933 718 53 25 779 1472 33001280 33001973 0.000000e+00 723.0
13 TraesCS6B01G084700 chr6A 92.105 266 19 2 2033 2297 33961818 33961554 9.030000e-100 374.0
14 TraesCS6B01G084700 chr6A 86.337 344 34 6 1675 2007 33963038 33962697 1.950000e-96 363.0
15 TraesCS6B01G084700 chr6A 91.765 85 7 0 1600 1684 33002054 33002138 4.670000e-23 119.0
16 TraesCS6B01G084700 chr6A 85.135 74 9 2 2589 2660 46094951 46094878 1.030000e-09 75.0
17 TraesCS6B01G084700 chr6A 85.135 74 9 2 2589 2660 46126761 46126688 1.030000e-09 75.0
18 TraesCS6B01G084700 chr4D 86.898 664 42 23 1023 1673 444177265 444177896 0.000000e+00 702.0
19 TraesCS6B01G084700 chr4A 95.161 434 20 1 1027 1460 23611240 23610808 0.000000e+00 684.0
20 TraesCS6B01G084700 chr1D 91.616 489 31 9 1047 1535 321704952 321704474 0.000000e+00 667.0
21 TraesCS6B01G084700 chrUn 85.897 156 16 5 2508 2660 27968554 27968402 7.650000e-36 161.0
22 TraesCS6B01G084700 chrUn 85.000 80 11 1 2582 2660 27880202 27880281 2.200000e-11 80.5
23 TraesCS6B01G084700 chr2B 76.218 349 55 19 1614 1940 2243949 2243607 2.750000e-35 159.0
24 TraesCS6B01G084700 chr3D 75.701 321 50 17 1623 1921 19667309 19666995 4.640000e-28 135.0
25 TraesCS6B01G084700 chr3B 74.780 341 60 16 1614 1933 800628956 800628621 2.160000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G084700 chr6B 61794435 61797104 2669 True 2302.6 4521 100.00000 1 2670 2 chr6B.!!$R1 2669
1 TraesCS6B01G084700 chr6B 58777809 58778773 964 False 1469.0 1469 94.21500 1046 2007 1 chr6B.!!$F2 961
2 TraesCS6B01G084700 chr6B 58309737 58310837 1100 False 1057.0 1057 84.30300 779 1890 1 chr6B.!!$F1 1111
3 TraesCS6B01G084700 chr6B 59026383 59026970 587 False 441.0 741 92.02250 1047 1694 2 chr6B.!!$F3 647
4 TraesCS6B01G084700 chr6D 29391146 29392187 1041 True 486.5 754 82.84400 779 1872 2 chr6D.!!$R1 1093
5 TraesCS6B01G084700 chr6D 28687142 28690209 3067 False 448.0 723 89.24375 230 2297 4 chr6D.!!$F1 2067
6 TraesCS6B01G084700 chr6A 33001280 33002138 858 False 421.0 723 88.84900 779 1684 2 chr6A.!!$F1 905
7 TraesCS6B01G084700 chr6A 33961554 33963038 1484 True 368.5 374 89.22100 1675 2297 2 chr6A.!!$R3 622
8 TraesCS6B01G084700 chr4D 444177265 444177896 631 False 702.0 702 86.89800 1023 1673 1 chr4D.!!$F1 650

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
961 1094 0.037046 TCCTTAAAACGCTCCCCGAC 60.037 55.0 0.0 0.0 41.02 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2607 3825 0.032813 CAGGACAGGGATGGGCAAAT 60.033 55.0 0.0 0.0 0.0 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.742983 CGACTCAGGGGAGCTAAAC 57.257 57.895 0.00 0.00 45.42 2.01
19 20 0.175989 CGACTCAGGGGAGCTAAACC 59.824 60.000 0.00 0.00 45.42 3.27
20 21 1.574263 GACTCAGGGGAGCTAAACCT 58.426 55.000 0.00 0.00 45.42 3.50
21 22 2.748388 GACTCAGGGGAGCTAAACCTA 58.252 52.381 3.26 0.00 45.42 3.08
22 23 2.696187 GACTCAGGGGAGCTAAACCTAG 59.304 54.545 3.26 5.01 45.42 3.02
23 24 2.044630 ACTCAGGGGAGCTAAACCTAGT 59.955 50.000 3.26 5.50 45.42 2.57
24 25 3.108376 CTCAGGGGAGCTAAACCTAGTT 58.892 50.000 3.26 0.00 33.67 2.24
25 26 3.105283 TCAGGGGAGCTAAACCTAGTTC 58.895 50.000 3.26 0.00 35.28 3.01
29 30 3.823281 GGAGCTAAACCTAGTTCCTCC 57.177 52.381 7.56 0.00 46.77 4.30
30 31 2.435069 GGAGCTAAACCTAGTTCCTCCC 59.565 54.545 7.56 0.00 46.77 4.30
31 32 2.435069 GAGCTAAACCTAGTTCCTCCCC 59.565 54.545 0.00 0.00 31.07 4.81
32 33 2.046025 AGCTAAACCTAGTTCCTCCCCT 59.954 50.000 0.00 0.00 0.00 4.79
33 34 2.435069 GCTAAACCTAGTTCCTCCCCTC 59.565 54.545 0.00 0.00 0.00 4.30
34 35 3.886548 GCTAAACCTAGTTCCTCCCCTCT 60.887 52.174 0.00 0.00 0.00 3.69
35 36 2.553911 AACCTAGTTCCTCCCCTCTC 57.446 55.000 0.00 0.00 0.00 3.20
36 37 0.259356 ACCTAGTTCCTCCCCTCTCG 59.741 60.000 0.00 0.00 0.00 4.04
37 38 0.259356 CCTAGTTCCTCCCCTCTCGT 59.741 60.000 0.00 0.00 0.00 4.18
38 39 1.682740 CTAGTTCCTCCCCTCTCGTC 58.317 60.000 0.00 0.00 0.00 4.20
39 40 0.258194 TAGTTCCTCCCCTCTCGTCC 59.742 60.000 0.00 0.00 0.00 4.79
40 41 1.305046 GTTCCTCCCCTCTCGTCCA 60.305 63.158 0.00 0.00 0.00 4.02
41 42 0.688087 GTTCCTCCCCTCTCGTCCAT 60.688 60.000 0.00 0.00 0.00 3.41
42 43 0.687757 TTCCTCCCCTCTCGTCCATG 60.688 60.000 0.00 0.00 0.00 3.66
43 44 1.381872 CCTCCCCTCTCGTCCATGT 60.382 63.158 0.00 0.00 0.00 3.21
44 45 0.978146 CCTCCCCTCTCGTCCATGTT 60.978 60.000 0.00 0.00 0.00 2.71
245 246 1.959899 CTTGTGCCGATGACTGTCGC 61.960 60.000 2.98 0.98 40.17 5.19
247 248 3.690280 TGCCGATGACTGTCGCCA 61.690 61.111 2.98 0.00 40.17 5.69
248 249 2.202932 GCCGATGACTGTCGCCAT 60.203 61.111 2.98 0.00 40.17 4.40
264 265 0.744414 CCATAGTGGGTGAGTTGCGG 60.744 60.000 0.00 0.00 32.67 5.69
281 282 2.027625 GGCGTGACCGAGGTTCTTG 61.028 63.158 0.00 0.00 35.63 3.02
293 294 2.829120 GAGGTTCTTGTCTCCACTAGCT 59.171 50.000 0.00 0.00 0.00 3.32
296 297 3.764972 GGTTCTTGTCTCCACTAGCTAGT 59.235 47.826 20.95 20.95 36.90 2.57
301 302 1.134159 GTCTCCACTAGCTAGTCCGGA 60.134 57.143 23.68 24.06 33.46 5.14
302 303 1.775459 TCTCCACTAGCTAGTCCGGAT 59.225 52.381 25.47 3.79 33.46 4.18
306 307 2.577700 CACTAGCTAGTCCGGATGAGT 58.422 52.381 23.68 2.14 33.46 3.41
317 318 4.225267 AGTCCGGATGAGTCCTTTGTTATT 59.775 41.667 7.81 0.00 42.73 1.40
320 321 4.261801 CGGATGAGTCCTTTGTTATTGGT 58.738 43.478 0.00 0.00 42.73 3.67
338 339 3.791586 GCTCCTCTCCACCCTGGC 61.792 72.222 0.00 0.00 37.47 4.85
339 340 3.086600 CTCCTCTCCACCCTGGCC 61.087 72.222 0.00 0.00 37.47 5.36
342 343 4.748798 CTCTCCACCCTGGCCCCT 62.749 72.222 0.00 0.00 37.47 4.79
343 344 4.285790 TCTCCACCCTGGCCCCTT 62.286 66.667 0.00 0.00 37.47 3.95
345 346 3.589542 TCCACCCTGGCCCCTTTG 61.590 66.667 0.00 0.00 37.47 2.77
351 352 4.697756 CTGGCCCCTTTGCGTCGA 62.698 66.667 0.00 0.00 0.00 4.20
354 355 2.746277 GCCCCTTTGCGTCGACAT 60.746 61.111 17.16 0.00 0.00 3.06
356 357 1.671054 CCCCTTTGCGTCGACATGT 60.671 57.895 17.16 0.00 0.00 3.21
357 358 1.497278 CCCTTTGCGTCGACATGTG 59.503 57.895 17.16 0.00 0.00 3.21
358 359 1.497278 CCTTTGCGTCGACATGTGG 59.503 57.895 17.16 0.87 0.00 4.17
361 366 3.529341 TTGCGTCGACATGTGGCCT 62.529 57.895 17.16 0.00 0.00 5.19
363 368 2.325082 GCGTCGACATGTGGCCTTT 61.325 57.895 17.16 0.00 0.00 3.11
385 390 4.168291 CTGGGCGAGAGGGGAAGC 62.168 72.222 0.00 0.00 0.00 3.86
419 424 2.446994 TGGTGGTGAGAACCCGGT 60.447 61.111 0.00 0.00 36.83 5.28
420 425 2.032071 GGTGGTGAGAACCCGGTG 59.968 66.667 0.00 0.00 0.00 4.94
436 441 2.922503 TGCTTCGGCCAGTCCTGA 60.923 61.111 2.24 0.00 40.91 3.86
437 442 2.435059 GCTTCGGCCAGTCCTGAC 60.435 66.667 2.24 0.00 34.32 3.51
442 447 1.376037 CGGCCAGTCCTGACCTTTC 60.376 63.158 2.24 0.00 30.27 2.62
452 457 0.606401 CTGACCTTTCGTGTGGGCAT 60.606 55.000 0.00 0.00 41.09 4.40
480 486 2.614057 CCTATTCGTGCCATGGTTTCTC 59.386 50.000 14.67 0.00 0.00 2.87
482 488 0.953471 TTCGTGCCATGGTTTCTCCG 60.953 55.000 14.67 7.01 39.52 4.63
491 497 0.748450 TGGTTTCTCCGTTCGTGACT 59.252 50.000 0.00 0.00 39.52 3.41
493 499 0.507358 GTTTCTCCGTTCGTGACTGC 59.493 55.000 0.00 0.00 0.00 4.40
498 504 3.816920 CGTTCGTGACTGCGCTCG 61.817 66.667 9.73 1.70 0.00 5.03
499 505 3.470567 GTTCGTGACTGCGCTCGG 61.471 66.667 9.73 1.02 0.00 4.63
512 518 1.857602 GCGCTCGGCAATTTTCATCTC 60.858 52.381 0.00 0.00 42.87 2.75
514 520 1.398390 GCTCGGCAATTTTCATCTCGT 59.602 47.619 0.00 0.00 0.00 4.18
515 521 2.159517 GCTCGGCAATTTTCATCTCGTT 60.160 45.455 0.00 0.00 0.00 3.85
526 532 6.438259 TTTTCATCTCGTTGTGTGGTTAAA 57.562 33.333 0.00 0.00 0.00 1.52
529 535 2.203401 TCTCGTTGTGTGGTTAAACCG 58.797 47.619 0.00 0.00 42.58 4.44
534 540 1.666054 TGTGTGGTTAAACCGTGGAC 58.334 50.000 0.00 0.00 42.58 4.02
541 547 2.360949 TTAAACCGTGGACGCCGACA 62.361 55.000 0.00 0.00 38.18 4.35
543 549 2.157305 AAACCGTGGACGCCGACATA 62.157 55.000 0.00 0.00 38.18 2.29
544 550 2.581409 CCGTGGACGCCGACATAC 60.581 66.667 0.00 0.00 38.18 2.39
545 551 2.179767 CGTGGACGCCGACATACA 59.820 61.111 0.00 0.00 0.00 2.29
549 555 2.124903 GTGGACGCCGACATACATAAG 58.875 52.381 0.00 0.00 0.00 1.73
550 556 2.025898 TGGACGCCGACATACATAAGA 58.974 47.619 0.00 0.00 0.00 2.10
551 557 2.626266 TGGACGCCGACATACATAAGAT 59.374 45.455 0.00 0.00 0.00 2.40
552 558 3.822167 TGGACGCCGACATACATAAGATA 59.178 43.478 0.00 0.00 0.00 1.98
553 559 4.278919 TGGACGCCGACATACATAAGATAA 59.721 41.667 0.00 0.00 0.00 1.75
554 560 4.620184 GGACGCCGACATACATAAGATAAC 59.380 45.833 0.00 0.00 0.00 1.89
555 561 4.553323 ACGCCGACATACATAAGATAACC 58.447 43.478 0.00 0.00 0.00 2.85
556 562 3.924686 CGCCGACATACATAAGATAACCC 59.075 47.826 0.00 0.00 0.00 4.11
559 565 5.510861 GCCGACATACATAAGATAACCCTGT 60.511 44.000 0.00 0.00 0.00 4.00
560 566 6.294899 GCCGACATACATAAGATAACCCTGTA 60.295 42.308 0.00 0.00 0.00 2.74
561 567 7.663827 CCGACATACATAAGATAACCCTGTAA 58.336 38.462 0.00 0.00 0.00 2.41
562 568 8.145767 CCGACATACATAAGATAACCCTGTAAA 58.854 37.037 0.00 0.00 0.00 2.01
563 569 9.706691 CGACATACATAAGATAACCCTGTAAAT 57.293 33.333 0.00 0.00 0.00 1.40
579 585 6.313411 CCCTGTAAATTCCATTCGTAAACGTA 59.687 38.462 2.02 0.00 40.80 3.57
588 594 3.984018 TTCGTAAACGTAGCATTGCTC 57.016 42.857 15.81 6.25 37.89 4.26
611 617 4.440940 CGGGTGATGCTAGTGTACAATACA 60.441 45.833 0.00 2.69 36.08 2.29
616 622 6.019479 GTGATGCTAGTGTACAATACAAGAGC 60.019 42.308 7.83 7.83 43.57 4.09
625 631 1.129251 CAATACAAGAGCAGTGCGTGG 59.871 52.381 10.00 1.06 0.00 4.94
629 635 1.823470 AAGAGCAGTGCGTGGCAAA 60.823 52.632 10.00 0.00 41.47 3.68
670 676 8.872845 ACTTTTGTTTTTCAGATTTAAGCACAG 58.127 29.630 0.00 0.00 0.00 3.66
676 682 9.677567 GTTTTTCAGATTTAAGCACAGACATAA 57.322 29.630 0.00 0.00 0.00 1.90
686 693 8.932945 TTAAGCACAGACATAATCTACAAGAG 57.067 34.615 0.00 0.00 35.15 2.85
691 698 7.495901 CACAGACATAATCTACAAGAGGACAT 58.504 38.462 0.00 0.00 35.15 3.06
698 705 3.173151 TCTACAAGAGGACATGAGCCAA 58.827 45.455 0.00 0.00 0.00 4.52
714 753 3.554934 AGCCAACTCAAATTCAGACACA 58.445 40.909 0.00 0.00 0.00 3.72
716 755 4.402155 AGCCAACTCAAATTCAGACACAAA 59.598 37.500 0.00 0.00 0.00 2.83
719 758 6.098679 CCAACTCAAATTCAGACACAAACAA 58.901 36.000 0.00 0.00 0.00 2.83
720 759 6.589523 CCAACTCAAATTCAGACACAAACAAA 59.410 34.615 0.00 0.00 0.00 2.83
724 763 8.087750 ACTCAAATTCAGACACAAACAAAAAGA 58.912 29.630 0.00 0.00 0.00 2.52
733 772 4.923281 ACACAAACAAAAAGAGAGTTGCAC 59.077 37.500 0.00 0.00 0.00 4.57
735 774 3.420839 AACAAAAAGAGAGTTGCACCG 57.579 42.857 0.00 0.00 0.00 4.94
736 775 1.676006 ACAAAAAGAGAGTTGCACCGG 59.324 47.619 0.00 0.00 0.00 5.28
739 778 1.048601 AAAGAGAGTTGCACCGGAGA 58.951 50.000 9.46 0.00 0.00 3.71
740 779 0.605589 AAGAGAGTTGCACCGGAGAG 59.394 55.000 9.46 0.00 0.00 3.20
741 780 0.251386 AGAGAGTTGCACCGGAGAGA 60.251 55.000 9.46 0.00 0.00 3.10
742 781 0.172352 GAGAGTTGCACCGGAGAGAG 59.828 60.000 9.46 0.00 0.00 3.20
743 782 0.540830 AGAGTTGCACCGGAGAGAGT 60.541 55.000 9.46 0.00 0.00 3.24
745 784 0.540830 AGTTGCACCGGAGAGAGTCT 60.541 55.000 9.46 0.00 0.00 3.24
746 785 0.389166 GTTGCACCGGAGAGAGTCTG 60.389 60.000 9.46 0.00 0.00 3.51
752 791 1.739049 CGGAGAGAGTCTGGATGCC 59.261 63.158 0.00 0.00 0.00 4.40
753 792 1.039785 CGGAGAGAGTCTGGATGCCA 61.040 60.000 0.00 0.00 0.00 4.92
754 793 0.463620 GGAGAGAGTCTGGATGCCAC 59.536 60.000 0.00 0.00 0.00 5.01
755 794 0.102120 GAGAGAGTCTGGATGCCACG 59.898 60.000 0.00 0.00 0.00 4.94
756 795 1.142748 GAGAGTCTGGATGCCACGG 59.857 63.158 0.00 0.00 0.00 4.94
757 796 2.512515 GAGTCTGGATGCCACGGC 60.513 66.667 0.00 0.00 42.35 5.68
758 797 4.101448 AGTCTGGATGCCACGGCC 62.101 66.667 5.42 0.00 41.09 6.13
802 879 0.893270 CCAACCAATGGGAACGCAGA 60.893 55.000 3.55 0.00 46.27 4.26
808 885 1.613437 CAATGGGAACGCAGAAACCTT 59.387 47.619 0.00 0.00 0.00 3.50
811 888 0.591659 GGGAACGCAGAAACCTTCAC 59.408 55.000 0.00 0.00 0.00 3.18
825 926 0.670546 CTTCACGCCACGGATCACTT 60.671 55.000 0.00 0.00 0.00 3.16
853 954 2.509336 CGCGTGACACCAGATCCC 60.509 66.667 0.00 0.00 0.00 3.85
859 960 3.682292 GACACCAGATCCCCACCGC 62.682 68.421 0.00 0.00 0.00 5.68
865 966 4.176752 GATCCCCACCGCCCACTC 62.177 72.222 0.00 0.00 0.00 3.51
888 989 1.999051 CGGATCCAACGCTCGAAAG 59.001 57.895 13.41 0.00 0.00 2.62
891 992 1.706287 GATCCAACGCTCGAAAGCCC 61.706 60.000 0.00 0.00 46.34 5.19
892 993 2.463589 ATCCAACGCTCGAAAGCCCA 62.464 55.000 0.00 0.00 46.34 5.36
894 995 2.668550 AACGCTCGAAAGCCCACC 60.669 61.111 0.00 0.00 46.34 4.61
895 996 3.178540 AACGCTCGAAAGCCCACCT 62.179 57.895 0.00 0.00 46.34 4.00
899 1000 3.327404 TCGAAAGCCCACCTCCCC 61.327 66.667 0.00 0.00 0.00 4.81
907 1008 3.083997 CCACCTCCCCTCCCGAAG 61.084 72.222 0.00 0.00 0.00 3.79
961 1094 0.037046 TCCTTAAAACGCTCCCCGAC 60.037 55.000 0.00 0.00 41.02 4.79
963 1096 1.356527 CTTAAAACGCTCCCCGACCG 61.357 60.000 0.00 0.00 41.02 4.79
991 1124 1.985622 TTCCCCATCCACTCCAATCT 58.014 50.000 0.00 0.00 0.00 2.40
1001 1153 0.839946 ACTCCAATCTCCAATCCCCG 59.160 55.000 0.00 0.00 0.00 5.73
1002 1154 1.131638 CTCCAATCTCCAATCCCCGA 58.868 55.000 0.00 0.00 0.00 5.14
1004 1156 0.532862 CCAATCTCCAATCCCCGACG 60.533 60.000 0.00 0.00 0.00 5.12
1021 1177 0.031994 ACGCAATCCACCAAGCAAAC 59.968 50.000 0.00 0.00 0.00 2.93
1022 1178 0.667184 CGCAATCCACCAAGCAAACC 60.667 55.000 0.00 0.00 0.00 3.27
1023 1179 0.320683 GCAATCCACCAAGCAAACCC 60.321 55.000 0.00 0.00 0.00 4.11
1025 1181 0.105246 AATCCACCAAGCAAACCCCA 60.105 50.000 0.00 0.00 0.00 4.96
1026 1182 0.542702 ATCCACCAAGCAAACCCCAG 60.543 55.000 0.00 0.00 0.00 4.45
1027 1183 2.736531 CACCAAGCAAACCCCAGC 59.263 61.111 0.00 0.00 0.00 4.85
1028 1184 2.524148 ACCAAGCAAACCCCAGCC 60.524 61.111 0.00 0.00 0.00 4.85
1029 1185 2.203684 CCAAGCAAACCCCAGCCT 60.204 61.111 0.00 0.00 0.00 4.58
1031 1187 2.282462 AAGCAAACCCCAGCCTCG 60.282 61.111 0.00 0.00 0.00 4.63
1568 1726 1.878102 GCGTGGTGAACTGATCTGGTT 60.878 52.381 4.49 4.63 0.00 3.67
1581 1739 2.825861 TCTGGTTTCGTGGTAGGAAC 57.174 50.000 0.00 0.00 0.00 3.62
1701 1892 6.091986 TCCATTTTCTGCTTTTGTTGTTTGTC 59.908 34.615 0.00 0.00 0.00 3.18
1721 1913 3.975035 GTCAACCTTGAAAATCAGCGAAC 59.025 43.478 0.00 0.00 39.21 3.95
1722 1914 3.004315 TCAACCTTGAAAATCAGCGAACC 59.996 43.478 0.00 0.00 33.55 3.62
1819 2020 7.692460 TTGTTTGATCTAATGTGATGCTTCT 57.308 32.000 0.88 0.00 0.00 2.85
1830 2031 1.348696 TGATGCTTCTGTTGCTCCTCA 59.651 47.619 0.88 0.00 0.00 3.86
1890 2098 9.191995 GTTTAGTGGACTGATATTTTTGTTTGG 57.808 33.333 0.00 0.00 0.00 3.28
1895 2103 5.408299 GGACTGATATTTTTGTTTGGCAACC 59.592 40.000 0.00 0.00 36.72 3.77
1990 2227 4.931002 ACCATTGCATTTGCTGTATTTCAC 59.069 37.500 3.94 0.00 42.66 3.18
2019 3224 3.117888 TGTTCATTATCCCTCCCTTGAGC 60.118 47.826 0.00 0.00 37.29 4.26
2033 3238 3.423154 GAGCGGAAACAGGGCACG 61.423 66.667 0.00 0.00 0.00 5.34
2086 3304 7.894708 TGCCTTTTGAAATGACATAATGAAGA 58.105 30.769 0.00 0.00 0.00 2.87
2087 3305 8.533657 TGCCTTTTGAAATGACATAATGAAGAT 58.466 29.630 0.00 0.00 0.00 2.40
2197 3415 3.114606 TGATAGGAGTTCTTCATGGGCA 58.885 45.455 0.00 0.00 0.00 5.36
2216 3434 5.186603 TGGGCAATACACAAGCAAAATATGA 59.813 36.000 0.00 0.00 0.00 2.15
2246 3464 2.689083 CGTATTGGCGGATGCTTCA 58.311 52.632 1.64 0.00 42.25 3.02
2248 3466 1.806247 CGTATTGGCGGATGCTTCAGA 60.806 52.381 3.92 0.00 42.25 3.27
2254 3472 1.378882 GCGGATGCTTCAGATGCCAA 61.379 55.000 5.86 0.00 38.39 4.52
2297 3515 9.788960 GAGGTTGAATTATCTTGTACCAAAATC 57.211 33.333 0.00 0.00 0.00 2.17
2298 3516 9.533831 AGGTTGAATTATCTTGTACCAAAATCT 57.466 29.630 0.00 0.00 0.00 2.40
2299 3517 9.573133 GGTTGAATTATCTTGTACCAAAATCTG 57.427 33.333 0.00 0.00 0.00 2.90
2306 3524 7.823745 ATCTTGTACCAAAATCTGTTGAACT 57.176 32.000 0.00 0.00 0.00 3.01
2307 3525 7.639113 TCTTGTACCAAAATCTGTTGAACTT 57.361 32.000 0.00 0.00 0.00 2.66
2308 3526 8.062065 TCTTGTACCAAAATCTGTTGAACTTT 57.938 30.769 0.00 0.00 0.00 2.66
2309 3527 8.527810 TCTTGTACCAAAATCTGTTGAACTTTT 58.472 29.630 0.00 0.00 0.00 2.27
2310 3528 9.796120 CTTGTACCAAAATCTGTTGAACTTTTA 57.204 29.630 0.00 0.00 0.00 1.52
2311 3529 9.575783 TTGTACCAAAATCTGTTGAACTTTTAC 57.424 29.630 0.00 0.00 0.00 2.01
2312 3530 8.192110 TGTACCAAAATCTGTTGAACTTTTACC 58.808 33.333 0.00 0.00 0.00 2.85
2313 3531 7.418337 ACCAAAATCTGTTGAACTTTTACCT 57.582 32.000 0.00 0.00 0.00 3.08
2314 3532 7.847096 ACCAAAATCTGTTGAACTTTTACCTT 58.153 30.769 0.00 0.00 0.00 3.50
2315 3533 8.318412 ACCAAAATCTGTTGAACTTTTACCTTT 58.682 29.630 0.00 0.00 0.00 3.11
2316 3534 9.161629 CCAAAATCTGTTGAACTTTTACCTTTT 57.838 29.630 0.00 0.00 0.00 2.27
2340 3558 9.651913 TTTTTCAACAAAATGCTTCTTAGAACT 57.348 25.926 0.00 0.00 31.39 3.01
2363 3581 9.890629 AACTATATGAGATTCAGTTTAACTGCA 57.109 29.630 19.24 10.06 45.54 4.41
2364 3582 9.890629 ACTATATGAGATTCAGTTTAACTGCAA 57.109 29.630 19.24 14.25 45.54 4.08
2367 3585 6.882610 TGAGATTCAGTTTAACTGCAATGT 57.117 33.333 19.24 16.38 45.54 2.71
2368 3586 6.671190 TGAGATTCAGTTTAACTGCAATGTG 58.329 36.000 19.24 0.00 45.54 3.21
2369 3587 6.017400 AGATTCAGTTTAACTGCAATGTGG 57.983 37.500 19.24 0.00 45.54 4.17
2370 3588 5.769662 AGATTCAGTTTAACTGCAATGTGGA 59.230 36.000 19.24 0.00 45.54 4.02
2371 3589 5.843673 TTCAGTTTAACTGCAATGTGGAA 57.156 34.783 19.24 4.15 45.54 3.53
2372 3590 5.437289 TCAGTTTAACTGCAATGTGGAAG 57.563 39.130 19.24 0.00 45.54 3.46
2373 3591 4.278170 TCAGTTTAACTGCAATGTGGAAGG 59.722 41.667 19.24 0.00 45.54 3.46
2374 3592 4.037923 CAGTTTAACTGCAATGTGGAAGGT 59.962 41.667 12.37 0.00 39.62 3.50
2375 3593 4.037923 AGTTTAACTGCAATGTGGAAGGTG 59.962 41.667 0.00 0.00 0.00 4.00
2376 3594 0.675633 AACTGCAATGTGGAAGGTGC 59.324 50.000 0.00 0.00 37.51 5.01
2377 3595 0.467844 ACTGCAATGTGGAAGGTGCA 60.468 50.000 0.00 0.00 44.36 4.57
2378 3596 0.675083 CTGCAATGTGGAAGGTGCAA 59.325 50.000 0.00 0.00 45.71 4.08
2379 3597 1.068895 CTGCAATGTGGAAGGTGCAAA 59.931 47.619 0.00 0.00 45.71 3.68
2380 3598 1.693062 TGCAATGTGGAAGGTGCAAAT 59.307 42.857 0.00 0.00 43.65 2.32
2381 3599 2.070783 GCAATGTGGAAGGTGCAAATG 58.929 47.619 0.00 0.00 36.97 2.32
2382 3600 2.070783 CAATGTGGAAGGTGCAAATGC 58.929 47.619 0.00 0.00 42.50 3.56
2383 3601 0.609662 ATGTGGAAGGTGCAAATGCC 59.390 50.000 2.46 0.00 41.18 4.40
2384 3602 1.080569 GTGGAAGGTGCAAATGCCG 60.081 57.895 2.46 0.00 41.18 5.69
2385 3603 2.125952 GGAAGGTGCAAATGCCGC 60.126 61.111 2.46 0.00 41.18 6.53
2386 3604 2.650196 GAAGGTGCAAATGCCGCA 59.350 55.556 2.46 0.00 41.18 5.69
2387 3605 1.216178 GAAGGTGCAAATGCCGCAT 59.784 52.632 0.00 0.00 42.32 4.73
2388 3606 0.455410 GAAGGTGCAAATGCCGCATA 59.545 50.000 6.22 0.00 42.32 3.14
2389 3607 0.894141 AAGGTGCAAATGCCGCATAA 59.106 45.000 6.22 0.00 42.32 1.90
2390 3608 0.894141 AGGTGCAAATGCCGCATAAA 59.106 45.000 6.22 0.00 42.32 1.40
2391 3609 1.274728 AGGTGCAAATGCCGCATAAAA 59.725 42.857 6.22 0.00 42.32 1.52
2392 3610 2.072298 GGTGCAAATGCCGCATAAAAA 58.928 42.857 6.22 0.00 42.32 1.94
2393 3611 2.159720 GGTGCAAATGCCGCATAAAAAC 60.160 45.455 6.22 3.72 42.32 2.43
2394 3612 2.478134 GTGCAAATGCCGCATAAAAACA 59.522 40.909 6.22 0.00 42.32 2.83
2395 3613 3.059325 GTGCAAATGCCGCATAAAAACAA 60.059 39.130 6.22 0.00 42.32 2.83
2396 3614 3.561310 TGCAAATGCCGCATAAAAACAAA 59.439 34.783 6.22 0.00 41.18 2.83
2397 3615 4.214971 TGCAAATGCCGCATAAAAACAAAT 59.785 33.333 6.22 0.00 41.18 2.32
2398 3616 5.409520 TGCAAATGCCGCATAAAAACAAATA 59.590 32.000 6.22 0.00 41.18 1.40
2399 3617 6.093219 TGCAAATGCCGCATAAAAACAAATAT 59.907 30.769 6.22 0.00 41.18 1.28
2400 3618 6.966066 GCAAATGCCGCATAAAAACAAATATT 59.034 30.769 6.22 0.00 34.31 1.28
2401 3619 8.119226 GCAAATGCCGCATAAAAACAAATATTA 58.881 29.630 6.22 0.00 34.31 0.98
2404 3622 9.539825 AATGCCGCATAAAAACAAATATTATCA 57.460 25.926 6.22 0.00 0.00 2.15
2405 3623 8.346476 TGCCGCATAAAAACAAATATTATCAC 57.654 30.769 0.00 0.00 0.00 3.06
2406 3624 7.976175 TGCCGCATAAAAACAAATATTATCACA 59.024 29.630 0.00 0.00 0.00 3.58
2407 3625 8.265998 GCCGCATAAAAACAAATATTATCACAC 58.734 33.333 0.00 0.00 0.00 3.82
2408 3626 8.468349 CCGCATAAAAACAAATATTATCACACG 58.532 33.333 0.00 0.00 0.00 4.49
2409 3627 9.216087 CGCATAAAAACAAATATTATCACACGA 57.784 29.630 0.00 0.00 0.00 4.35
2412 3630 7.487180 AAAAACAAATATTATCACACGACGC 57.513 32.000 0.00 0.00 0.00 5.19
2413 3631 4.431894 ACAAATATTATCACACGACGCG 57.568 40.909 3.53 3.53 0.00 6.01
2414 3632 4.106909 ACAAATATTATCACACGACGCGA 58.893 39.130 15.93 0.00 0.00 5.87
2415 3633 4.743151 ACAAATATTATCACACGACGCGAT 59.257 37.500 15.93 0.00 0.00 4.58
2416 3634 5.233476 ACAAATATTATCACACGACGCGATT 59.767 36.000 15.93 0.00 0.00 3.34
2417 3635 5.900339 AATATTATCACACGACGCGATTT 57.100 34.783 15.93 0.00 0.00 2.17
2418 3636 6.996562 AATATTATCACACGACGCGATTTA 57.003 33.333 15.93 0.00 0.00 1.40
2419 3637 7.576750 AATATTATCACACGACGCGATTTAT 57.423 32.000 15.93 0.00 0.00 1.40
2420 3638 5.900339 ATTATCACACGACGCGATTTATT 57.100 34.783 15.93 0.00 0.00 1.40
2421 3639 6.996562 ATTATCACACGACGCGATTTATTA 57.003 33.333 15.93 0.00 0.00 0.98
2422 3640 4.948864 ATCACACGACGCGATTTATTAG 57.051 40.909 15.93 0.00 0.00 1.73
2423 3641 4.018649 TCACACGACGCGATTTATTAGA 57.981 40.909 15.93 0.00 0.00 2.10
2424 3642 4.033019 TCACACGACGCGATTTATTAGAG 58.967 43.478 15.93 0.00 0.00 2.43
2425 3643 4.033019 CACACGACGCGATTTATTAGAGA 58.967 43.478 15.93 0.00 0.00 3.10
2426 3644 4.497966 CACACGACGCGATTTATTAGAGAA 59.502 41.667 15.93 0.00 0.00 2.87
2427 3645 5.004061 CACACGACGCGATTTATTAGAGAAA 59.996 40.000 15.93 0.00 0.00 2.52
2428 3646 5.747197 ACACGACGCGATTTATTAGAGAAAT 59.253 36.000 15.93 0.00 0.00 2.17
2429 3647 6.914215 ACACGACGCGATTTATTAGAGAAATA 59.086 34.615 15.93 0.00 0.00 1.40
2430 3648 7.594015 ACACGACGCGATTTATTAGAGAAATAT 59.406 33.333 15.93 0.00 30.11 1.28
2431 3649 7.888209 CACGACGCGATTTATTAGAGAAATATG 59.112 37.037 15.93 0.00 30.11 1.78
2432 3650 6.889833 CGACGCGATTTATTAGAGAAATATGC 59.110 38.462 15.93 0.00 30.11 3.14
2433 3651 7.410407 CGACGCGATTTATTAGAGAAATATGCA 60.410 37.037 15.93 0.00 31.84 3.96
2434 3652 8.083462 ACGCGATTTATTAGAGAAATATGCAA 57.917 30.769 15.93 0.00 31.84 4.08
2435 3653 8.223769 ACGCGATTTATTAGAGAAATATGCAAG 58.776 33.333 15.93 0.00 31.84 4.01
2436 3654 8.223769 CGCGATTTATTAGAGAAATATGCAAGT 58.776 33.333 0.00 0.00 31.84 3.16
2437 3655 9.322776 GCGATTTATTAGAGAAATATGCAAGTG 57.677 33.333 0.00 0.00 32.28 3.16
2444 3662 6.981762 AGAGAAATATGCAAGTGACTGAAG 57.018 37.500 0.00 0.00 0.00 3.02
2445 3663 6.705302 AGAGAAATATGCAAGTGACTGAAGA 58.295 36.000 0.00 0.00 0.00 2.87
2446 3664 7.337167 AGAGAAATATGCAAGTGACTGAAGAT 58.663 34.615 0.00 0.00 0.00 2.40
2447 3665 7.495279 AGAGAAATATGCAAGTGACTGAAGATC 59.505 37.037 0.00 0.00 0.00 2.75
2448 3666 7.337167 AGAAATATGCAAGTGACTGAAGATCT 58.663 34.615 0.00 0.00 0.00 2.75
2449 3667 7.828223 AGAAATATGCAAGTGACTGAAGATCTT 59.172 33.333 7.95 7.95 0.00 2.40
2450 3668 7.551035 AATATGCAAGTGACTGAAGATCTTC 57.449 36.000 25.68 25.68 39.91 2.87
2451 3669 4.613925 TGCAAGTGACTGAAGATCTTCT 57.386 40.909 30.45 15.67 40.14 2.85
2452 3670 5.728637 TGCAAGTGACTGAAGATCTTCTA 57.271 39.130 30.45 18.32 40.14 2.10
2453 3671 6.101650 TGCAAGTGACTGAAGATCTTCTAA 57.898 37.500 30.45 14.63 40.14 2.10
2454 3672 6.524734 TGCAAGTGACTGAAGATCTTCTAAA 58.475 36.000 30.45 13.97 40.14 1.85
2455 3673 6.648310 TGCAAGTGACTGAAGATCTTCTAAAG 59.352 38.462 30.45 22.94 40.14 1.85
2456 3674 6.870965 GCAAGTGACTGAAGATCTTCTAAAGA 59.129 38.462 30.45 13.31 42.69 2.52
2457 3675 7.386299 GCAAGTGACTGAAGATCTTCTAAAGAA 59.614 37.037 30.45 12.67 41.63 2.52
2468 3686 4.891992 CTTCTAAAGAAGGGGTGACAGA 57.108 45.455 11.22 0.00 45.79 3.41
2469 3687 4.826556 CTTCTAAAGAAGGGGTGACAGAG 58.173 47.826 11.22 0.00 45.79 3.35
2470 3688 2.567615 TCTAAAGAAGGGGTGACAGAGC 59.432 50.000 0.00 0.00 0.00 4.09
2471 3689 0.402121 AAAGAAGGGGTGACAGAGCC 59.598 55.000 0.00 0.00 42.09 4.70
2472 3690 0.768221 AAGAAGGGGTGACAGAGCCA 60.768 55.000 0.00 0.00 44.97 4.75
2473 3691 0.768221 AGAAGGGGTGACAGAGCCAA 60.768 55.000 0.00 0.00 44.97 4.52
2474 3692 0.606673 GAAGGGGTGACAGAGCCAAC 60.607 60.000 0.00 0.00 44.97 3.77
2475 3693 1.062488 AAGGGGTGACAGAGCCAACT 61.062 55.000 0.00 0.00 44.97 3.16
2476 3694 1.302832 GGGGTGACAGAGCCAACTG 60.303 63.158 0.00 0.00 44.97 3.16
2477 3695 1.302832 GGGTGACAGAGCCAACTGG 60.303 63.158 0.00 0.00 42.41 4.00
2478 3696 1.451936 GGTGACAGAGCCAACTGGT 59.548 57.895 0.00 0.00 41.59 4.00
2479 3697 0.886490 GGTGACAGAGCCAACTGGTG 60.886 60.000 0.00 0.00 41.59 4.17
2480 3698 0.179045 GTGACAGAGCCAACTGGTGT 60.179 55.000 0.00 0.00 41.59 4.16
2481 3699 0.106708 TGACAGAGCCAACTGGTGTC 59.893 55.000 9.83 9.83 41.59 3.67
2482 3700 0.603975 GACAGAGCCAACTGGTGTCC 60.604 60.000 6.69 0.00 41.59 4.02
2483 3701 1.302832 CAGAGCCAACTGGTGTCCC 60.303 63.158 0.00 0.00 37.57 4.46
2484 3702 1.770110 AGAGCCAACTGGTGTCCCA 60.770 57.895 0.00 0.00 38.87 4.37
2485 3703 1.600916 GAGCCAACTGGTGTCCCAC 60.601 63.158 0.00 0.00 35.17 4.61
2497 3715 2.532843 GTGTCCCACCCTAACACTAGA 58.467 52.381 0.00 0.00 40.07 2.43
2498 3716 2.901839 GTGTCCCACCCTAACACTAGAA 59.098 50.000 0.00 0.00 40.07 2.10
2499 3717 3.518303 GTGTCCCACCCTAACACTAGAAT 59.482 47.826 0.00 0.00 40.07 2.40
2500 3718 4.713321 GTGTCCCACCCTAACACTAGAATA 59.287 45.833 0.00 0.00 40.07 1.75
2501 3719 5.365895 GTGTCCCACCCTAACACTAGAATAT 59.634 44.000 0.00 0.00 40.07 1.28
2502 3720 5.968167 TGTCCCACCCTAACACTAGAATATT 59.032 40.000 0.00 0.00 0.00 1.28
2503 3721 6.099269 TGTCCCACCCTAACACTAGAATATTC 59.901 42.308 7.41 7.41 0.00 1.75
2504 3722 5.303589 TCCCACCCTAACACTAGAATATTCG 59.696 44.000 9.78 0.00 0.00 3.34
2505 3723 5.510861 CCCACCCTAACACTAGAATATTCGG 60.511 48.000 9.78 9.35 0.00 4.30
2506 3724 4.989168 CACCCTAACACTAGAATATTCGGC 59.011 45.833 9.78 0.00 0.00 5.54
2507 3725 4.652421 ACCCTAACACTAGAATATTCGGCA 59.348 41.667 9.78 0.00 0.00 5.69
2508 3726 4.989168 CCCTAACACTAGAATATTCGGCAC 59.011 45.833 9.78 0.00 0.00 5.01
2509 3727 5.221461 CCCTAACACTAGAATATTCGGCACT 60.221 44.000 9.78 0.00 0.00 4.40
2510 3728 5.921408 CCTAACACTAGAATATTCGGCACTC 59.079 44.000 9.78 0.00 0.00 3.51
2511 3729 5.599999 AACACTAGAATATTCGGCACTCT 57.400 39.130 9.78 0.00 0.00 3.24
2512 3730 5.599999 ACACTAGAATATTCGGCACTCTT 57.400 39.130 9.78 0.00 0.00 2.85
2513 3731 6.710597 ACACTAGAATATTCGGCACTCTTA 57.289 37.500 9.78 0.00 0.00 2.10
2514 3732 6.505272 ACACTAGAATATTCGGCACTCTTAC 58.495 40.000 9.78 0.00 0.00 2.34
2515 3733 5.625721 CACTAGAATATTCGGCACTCTTACG 59.374 44.000 9.78 0.00 0.00 3.18
2516 3734 4.913335 AGAATATTCGGCACTCTTACGA 57.087 40.909 9.78 0.00 34.47 3.43
2517 3735 4.608951 AGAATATTCGGCACTCTTACGAC 58.391 43.478 9.78 0.00 36.24 4.34
2518 3736 4.097437 AGAATATTCGGCACTCTTACGACA 59.903 41.667 9.78 0.00 36.24 4.35
2519 3737 1.992170 ATTCGGCACTCTTACGACAC 58.008 50.000 0.00 0.00 36.24 3.67
2520 3738 0.669619 TTCGGCACTCTTACGACACA 59.330 50.000 0.00 0.00 36.24 3.72
2521 3739 0.669619 TCGGCACTCTTACGACACAA 59.330 50.000 0.00 0.00 0.00 3.33
2522 3740 1.271379 TCGGCACTCTTACGACACAAT 59.729 47.619 0.00 0.00 0.00 2.71
2523 3741 2.066262 CGGCACTCTTACGACACAATT 58.934 47.619 0.00 0.00 0.00 2.32
2524 3742 2.478894 CGGCACTCTTACGACACAATTT 59.521 45.455 0.00 0.00 0.00 1.82
2525 3743 3.059188 CGGCACTCTTACGACACAATTTT 60.059 43.478 0.00 0.00 0.00 1.82
2526 3744 4.219033 GGCACTCTTACGACACAATTTTG 58.781 43.478 0.00 0.00 0.00 2.44
2527 3745 4.024387 GGCACTCTTACGACACAATTTTGA 60.024 41.667 0.00 0.00 0.00 2.69
2528 3746 5.504994 GGCACTCTTACGACACAATTTTGAA 60.505 40.000 0.00 0.00 0.00 2.69
2529 3747 5.395486 GCACTCTTACGACACAATTTTGAAC 59.605 40.000 0.00 0.00 0.00 3.18
2530 3748 6.482835 CACTCTTACGACACAATTTTGAACA 58.517 36.000 0.00 0.00 0.00 3.18
2531 3749 7.132213 CACTCTTACGACACAATTTTGAACAT 58.868 34.615 0.00 0.00 0.00 2.71
2532 3750 7.321271 CACTCTTACGACACAATTTTGAACATC 59.679 37.037 0.00 0.00 0.00 3.06
2533 3751 7.226720 ACTCTTACGACACAATTTTGAACATCT 59.773 33.333 0.00 0.00 0.00 2.90
2534 3752 7.572759 TCTTACGACACAATTTTGAACATCTC 58.427 34.615 0.00 0.00 0.00 2.75
2535 3753 7.441157 TCTTACGACACAATTTTGAACATCTCT 59.559 33.333 0.00 0.00 0.00 3.10
2536 3754 6.377327 ACGACACAATTTTGAACATCTCTT 57.623 33.333 0.00 0.00 0.00 2.85
2537 3755 6.795399 ACGACACAATTTTGAACATCTCTTT 58.205 32.000 0.00 0.00 0.00 2.52
2538 3756 6.692681 ACGACACAATTTTGAACATCTCTTTG 59.307 34.615 0.00 0.00 0.00 2.77
2539 3757 6.692681 CGACACAATTTTGAACATCTCTTTGT 59.307 34.615 0.00 0.00 0.00 2.83
2540 3758 7.220683 CGACACAATTTTGAACATCTCTTTGTT 59.779 33.333 0.00 0.00 42.37 2.83
2541 3759 9.515020 GACACAATTTTGAACATCTCTTTGTTA 57.485 29.630 0.00 0.00 39.85 2.41
2576 3794 3.876274 TCTGGAAGAATCTTCAGACCG 57.124 47.619 22.71 7.41 42.31 4.79
2577 3795 3.165875 TCTGGAAGAATCTTCAGACCGT 58.834 45.455 22.71 0.00 42.31 4.83
2578 3796 3.056536 TCTGGAAGAATCTTCAGACCGTG 60.057 47.826 22.71 5.44 42.31 4.94
2579 3797 2.897326 TGGAAGAATCTTCAGACCGTGA 59.103 45.455 22.71 0.00 0.00 4.35
2580 3798 3.515502 TGGAAGAATCTTCAGACCGTGAT 59.484 43.478 22.71 0.00 34.17 3.06
2581 3799 4.709886 TGGAAGAATCTTCAGACCGTGATA 59.290 41.667 22.71 0.00 34.17 2.15
2582 3800 5.363868 TGGAAGAATCTTCAGACCGTGATAT 59.636 40.000 22.71 0.00 34.17 1.63
2583 3801 6.127054 TGGAAGAATCTTCAGACCGTGATATT 60.127 38.462 22.71 0.00 34.17 1.28
2584 3802 7.069455 TGGAAGAATCTTCAGACCGTGATATTA 59.931 37.037 22.71 0.00 34.17 0.98
2585 3803 7.596995 GGAAGAATCTTCAGACCGTGATATTAG 59.403 40.741 22.71 0.00 34.17 1.73
2586 3804 6.987386 AGAATCTTCAGACCGTGATATTAGG 58.013 40.000 0.00 0.00 34.17 2.69
2587 3805 6.778069 AGAATCTTCAGACCGTGATATTAGGA 59.222 38.462 0.00 0.00 34.17 2.94
2588 3806 7.453126 AGAATCTTCAGACCGTGATATTAGGAT 59.547 37.037 0.00 0.00 34.17 3.24
2589 3807 8.651589 AATCTTCAGACCGTGATATTAGGATA 57.348 34.615 0.00 0.00 34.17 2.59
2590 3808 8.651589 ATCTTCAGACCGTGATATTAGGATAA 57.348 34.615 0.00 0.00 34.17 1.75
2591 3809 8.651589 TCTTCAGACCGTGATATTAGGATAAT 57.348 34.615 0.00 0.00 34.17 1.28
2592 3810 9.749340 TCTTCAGACCGTGATATTAGGATAATA 57.251 33.333 0.00 0.00 34.17 0.98
2596 3814 9.035607 CAGACCGTGATATTAGGATAATATTGC 57.964 37.037 0.00 0.00 0.00 3.56
2597 3815 8.982723 AGACCGTGATATTAGGATAATATTGCT 58.017 33.333 0.00 0.00 0.00 3.91
2598 3816 9.601217 GACCGTGATATTAGGATAATATTGCTT 57.399 33.333 0.00 0.00 0.00 3.91
2599 3817 9.959721 ACCGTGATATTAGGATAATATTGCTTT 57.040 29.630 0.00 0.00 0.00 3.51
2603 3821 9.979897 TGATATTAGGATAATATTGCTTTGGCT 57.020 29.630 0.00 0.00 39.59 4.75
2607 3825 8.532186 TTAGGATAATATTGCTTTGGCTTTGA 57.468 30.769 0.00 0.00 39.59 2.69
2608 3826 7.607615 AGGATAATATTGCTTTGGCTTTGAT 57.392 32.000 0.00 0.00 39.59 2.57
2609 3827 8.026396 AGGATAATATTGCTTTGGCTTTGATT 57.974 30.769 0.00 0.00 39.59 2.57
2610 3828 8.488668 AGGATAATATTGCTTTGGCTTTGATTT 58.511 29.630 0.00 0.00 39.59 2.17
2611 3829 8.553696 GGATAATATTGCTTTGGCTTTGATTTG 58.446 33.333 0.00 0.00 39.59 2.32
2612 3830 5.806366 ATATTGCTTTGGCTTTGATTTGC 57.194 34.783 0.00 0.00 39.59 3.68
2618 3836 3.766644 GGCTTTGATTTGCCCATCC 57.233 52.632 0.00 0.00 43.11 3.51
2619 3837 0.178767 GGCTTTGATTTGCCCATCCC 59.821 55.000 0.00 0.00 43.11 3.85
2620 3838 1.197812 GCTTTGATTTGCCCATCCCT 58.802 50.000 0.00 0.00 0.00 4.20
2621 3839 1.134610 GCTTTGATTTGCCCATCCCTG 60.135 52.381 0.00 0.00 0.00 4.45
2622 3840 2.181975 CTTTGATTTGCCCATCCCTGT 58.818 47.619 0.00 0.00 0.00 4.00
2623 3841 1.851304 TTGATTTGCCCATCCCTGTC 58.149 50.000 0.00 0.00 0.00 3.51
2624 3842 0.033208 TGATTTGCCCATCCCTGTCC 60.033 55.000 0.00 0.00 0.00 4.02
2625 3843 0.259938 GATTTGCCCATCCCTGTCCT 59.740 55.000 0.00 0.00 0.00 3.85
2626 3844 0.032813 ATTTGCCCATCCCTGTCCTG 60.033 55.000 0.00 0.00 0.00 3.86
2627 3845 1.139498 TTTGCCCATCCCTGTCCTGA 61.139 55.000 0.00 0.00 0.00 3.86
2628 3846 0.920763 TTGCCCATCCCTGTCCTGAT 60.921 55.000 0.00 0.00 0.00 2.90
2629 3847 1.348008 TGCCCATCCCTGTCCTGATC 61.348 60.000 0.00 0.00 0.00 2.92
2630 3848 1.348008 GCCCATCCCTGTCCTGATCA 61.348 60.000 0.00 0.00 0.00 2.92
2631 3849 1.216064 CCCATCCCTGTCCTGATCAA 58.784 55.000 0.00 0.00 0.00 2.57
2632 3850 1.565759 CCCATCCCTGTCCTGATCAAA 59.434 52.381 0.00 0.00 0.00 2.69
2633 3851 2.176364 CCCATCCCTGTCCTGATCAAAT 59.824 50.000 0.00 0.00 0.00 2.32
2634 3852 3.395607 CCCATCCCTGTCCTGATCAAATA 59.604 47.826 0.00 0.00 0.00 1.40
2635 3853 4.141181 CCCATCCCTGTCCTGATCAAATAA 60.141 45.833 0.00 0.00 0.00 1.40
2636 3854 5.458654 CCCATCCCTGTCCTGATCAAATAAT 60.459 44.000 0.00 0.00 0.00 1.28
2637 3855 6.073314 CCATCCCTGTCCTGATCAAATAATT 58.927 40.000 0.00 0.00 0.00 1.40
2638 3856 6.208204 CCATCCCTGTCCTGATCAAATAATTC 59.792 42.308 0.00 0.00 0.00 2.17
2639 3857 5.694995 TCCCTGTCCTGATCAAATAATTCC 58.305 41.667 0.00 0.00 0.00 3.01
2640 3858 5.433051 TCCCTGTCCTGATCAAATAATTCCT 59.567 40.000 0.00 0.00 0.00 3.36
2641 3859 6.068853 TCCCTGTCCTGATCAAATAATTCCTT 60.069 38.462 0.00 0.00 0.00 3.36
2642 3860 6.040166 CCCTGTCCTGATCAAATAATTCCTTG 59.960 42.308 0.00 0.00 0.00 3.61
2643 3861 6.830324 CCTGTCCTGATCAAATAATTCCTTGA 59.170 38.462 0.00 4.98 36.08 3.02
2644 3862 7.340232 CCTGTCCTGATCAAATAATTCCTTGAA 59.660 37.037 0.00 0.00 35.31 2.69
2645 3863 8.827832 TGTCCTGATCAAATAATTCCTTGAAT 57.172 30.769 0.00 0.00 35.31 2.57
2646 3864 9.258629 TGTCCTGATCAAATAATTCCTTGAATT 57.741 29.630 0.00 7.19 43.49 2.17
2663 3881 9.936759 TCCTTGAATTTAAAACAAAGAAACTGT 57.063 25.926 10.72 0.00 0.00 3.55
2667 3885 9.284594 TGAATTTAAAACAAAGAAACTGTCTCG 57.715 29.630 0.00 0.00 34.56 4.04
2668 3886 9.498307 GAATTTAAAACAAAGAAACTGTCTCGA 57.502 29.630 0.00 0.00 34.56 4.04
2669 3887 9.849166 AATTTAAAACAAAGAAACTGTCTCGAA 57.151 25.926 0.00 0.00 34.56 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.574263 AGGTTTAGCTCCCCTGAGTC 58.426 55.000 0.00 0.00 40.95 3.36
2 3 2.044630 ACTAGGTTTAGCTCCCCTGAGT 59.955 50.000 8.59 6.03 40.95 3.41
3 4 2.753247 ACTAGGTTTAGCTCCCCTGAG 58.247 52.381 8.59 5.56 41.84 3.35
4 5 2.942604 ACTAGGTTTAGCTCCCCTGA 57.057 50.000 8.59 0.00 0.00 3.86
6 7 2.046025 AGGAACTAGGTTTAGCTCCCCT 59.954 50.000 0.00 0.00 41.26 4.79
7 8 2.435069 GAGGAACTAGGTTTAGCTCCCC 59.565 54.545 0.00 0.00 41.26 4.81
9 10 2.435069 GGGAGGAACTAGGTTTAGCTCC 59.565 54.545 0.00 0.00 41.55 4.70
10 11 2.435069 GGGGAGGAACTAGGTTTAGCTC 59.565 54.545 0.00 0.00 41.55 4.09
11 12 2.046025 AGGGGAGGAACTAGGTTTAGCT 59.954 50.000 0.00 0.00 41.55 3.32
14 15 3.626729 CGAGAGGGGAGGAACTAGGTTTA 60.627 52.174 0.00 0.00 41.55 2.01
15 16 2.835389 GAGAGGGGAGGAACTAGGTTT 58.165 52.381 0.00 0.00 41.55 3.27
16 17 1.342175 CGAGAGGGGAGGAACTAGGTT 60.342 57.143 0.00 0.00 41.55 3.50
17 18 0.259356 CGAGAGGGGAGGAACTAGGT 59.741 60.000 0.00 0.00 41.55 3.08
18 19 0.259356 ACGAGAGGGGAGGAACTAGG 59.741 60.000 0.00 0.00 41.55 3.02
19 20 1.682740 GACGAGAGGGGAGGAACTAG 58.317 60.000 0.00 0.00 41.55 2.57
20 21 0.258194 GGACGAGAGGGGAGGAACTA 59.742 60.000 0.00 0.00 41.55 2.24
22 23 0.688087 ATGGACGAGAGGGGAGGAAC 60.688 60.000 0.00 0.00 0.00 3.62
23 24 0.687757 CATGGACGAGAGGGGAGGAA 60.688 60.000 0.00 0.00 0.00 3.36
24 25 1.075970 CATGGACGAGAGGGGAGGA 60.076 63.158 0.00 0.00 0.00 3.71
25 26 0.978146 AACATGGACGAGAGGGGAGG 60.978 60.000 0.00 0.00 0.00 4.30
26 27 2.596776 AACATGGACGAGAGGGGAG 58.403 57.895 0.00 0.00 0.00 4.30
27 28 4.887957 AACATGGACGAGAGGGGA 57.112 55.556 0.00 0.00 0.00 4.81
222 223 0.167470 CAGTCATCGGCACAAGCAAG 59.833 55.000 0.00 0.00 44.61 4.01
223 224 0.534877 ACAGTCATCGGCACAAGCAA 60.535 50.000 0.00 0.00 44.61 3.91
224 225 0.950555 GACAGTCATCGGCACAAGCA 60.951 55.000 0.00 0.00 44.61 3.91
225 226 1.790387 GACAGTCATCGGCACAAGC 59.210 57.895 0.00 0.00 41.10 4.01
226 227 1.959899 GCGACAGTCATCGGCACAAG 61.960 60.000 0.41 0.00 42.49 3.16
227 228 2.027073 GCGACAGTCATCGGCACAA 61.027 57.895 0.41 0.00 42.49 3.33
228 229 2.432456 GCGACAGTCATCGGCACA 60.432 61.111 0.41 0.00 42.49 4.57
245 246 0.744414 CCGCAACTCACCCACTATGG 60.744 60.000 0.00 0.00 37.25 2.74
247 248 1.078426 GCCGCAACTCACCCACTAT 60.078 57.895 0.00 0.00 0.00 2.12
248 249 2.345991 GCCGCAACTCACCCACTA 59.654 61.111 0.00 0.00 0.00 2.74
264 265 1.282930 GACAAGAACCTCGGTCACGC 61.283 60.000 0.00 0.00 40.69 5.34
274 275 3.764972 ACTAGCTAGTGGAGACAAGAACC 59.235 47.826 25.52 0.00 46.06 3.62
277 278 3.622630 GGACTAGCTAGTGGAGACAAGA 58.377 50.000 30.70 0.00 46.06 3.02
278 279 2.356382 CGGACTAGCTAGTGGAGACAAG 59.644 54.545 30.70 9.84 46.06 3.16
281 282 1.134159 TCCGGACTAGCTAGTGGAGAC 60.134 57.143 30.70 15.28 36.50 3.36
301 302 4.666512 AGCACCAATAACAAAGGACTCAT 58.333 39.130 0.00 0.00 0.00 2.90
302 303 4.072131 GAGCACCAATAACAAAGGACTCA 58.928 43.478 0.00 0.00 32.90 3.41
306 307 3.330701 AGAGGAGCACCAATAACAAAGGA 59.669 43.478 2.07 0.00 38.94 3.36
317 318 2.607750 GGGTGGAGAGGAGCACCA 60.608 66.667 2.07 0.00 39.35 4.17
320 321 2.284921 CCAGGGTGGAGAGGAGCA 60.285 66.667 0.00 0.00 40.96 4.26
334 335 4.697756 TCGACGCAAAGGGGCCAG 62.698 66.667 4.39 0.00 0.00 4.85
338 339 1.671054 ACATGTCGACGCAAAGGGG 60.671 57.895 11.62 0.00 0.00 4.79
339 340 1.497278 CACATGTCGACGCAAAGGG 59.503 57.895 11.62 0.00 0.00 3.95
342 343 2.612567 GGCCACATGTCGACGCAAA 61.613 57.895 11.62 0.00 0.00 3.68
343 344 3.047280 GGCCACATGTCGACGCAA 61.047 61.111 11.62 0.00 0.00 4.85
345 346 2.325082 AAAGGCCACATGTCGACGC 61.325 57.895 11.62 7.46 0.00 5.19
347 348 0.798776 CTCAAAGGCCACATGTCGAC 59.201 55.000 9.11 9.11 0.00 4.20
348 349 0.955428 GCTCAAAGGCCACATGTCGA 60.955 55.000 5.01 0.00 0.00 4.20
358 359 4.722700 TCGCCCAGGCTCAAAGGC 62.723 66.667 7.17 4.67 42.18 4.35
361 366 2.665000 CTCTCGCCCAGGCTCAAA 59.335 61.111 7.17 0.00 39.32 2.69
379 384 1.067060 GACACACCAAAGTTGCTTCCC 59.933 52.381 0.00 0.00 0.00 3.97
385 390 0.380378 CCACCGACACACCAAAGTTG 59.620 55.000 0.00 0.00 0.00 3.16
386 391 0.034863 ACCACCGACACACCAAAGTT 60.035 50.000 0.00 0.00 0.00 2.66
419 424 2.922503 TCAGGACTGGCCGAAGCA 60.923 61.111 0.00 0.00 43.43 3.91
420 425 2.435059 GTCAGGACTGGCCGAAGC 60.435 66.667 0.00 0.00 43.43 3.86
433 438 0.606401 ATGCCCACACGAAAGGTCAG 60.606 55.000 0.00 0.00 0.00 3.51
436 441 0.467290 ACAATGCCCACACGAAAGGT 60.467 50.000 0.00 0.00 0.00 3.50
437 442 0.673437 AACAATGCCCACACGAAAGG 59.327 50.000 0.00 0.00 0.00 3.11
458 464 1.676006 GAAACCATGGCACGAATAGGG 59.324 52.381 13.04 0.00 0.00 3.53
459 465 2.614057 GAGAAACCATGGCACGAATAGG 59.386 50.000 13.04 0.00 0.00 2.57
464 470 1.375396 CGGAGAAACCATGGCACGA 60.375 57.895 13.04 0.00 38.90 4.35
465 471 1.234615 AACGGAGAAACCATGGCACG 61.235 55.000 13.04 10.00 38.90 5.34
480 486 3.470567 GAGCGCAGTCACGAACGG 61.471 66.667 11.47 0.00 34.06 4.44
482 488 3.470567 CCGAGCGCAGTCACGAAC 61.471 66.667 11.47 0.00 34.06 3.95
493 499 1.593070 CGAGATGAAAATTGCCGAGCG 60.593 52.381 0.00 0.00 0.00 5.03
498 504 3.670055 CACACAACGAGATGAAAATTGCC 59.330 43.478 0.00 0.00 0.00 4.52
499 505 3.670055 CCACACAACGAGATGAAAATTGC 59.330 43.478 0.00 0.00 0.00 3.56
502 508 6.627395 TTAACCACACAACGAGATGAAAAT 57.373 33.333 0.00 0.00 0.00 1.82
512 518 1.268133 CCACGGTTTAACCACACAACG 60.268 52.381 14.97 0.72 38.47 4.10
514 520 2.015587 GTCCACGGTTTAACCACACAA 58.984 47.619 14.97 0.00 38.47 3.33
515 521 1.666054 GTCCACGGTTTAACCACACA 58.334 50.000 14.97 0.00 38.47 3.72
526 532 3.063704 TATGTCGGCGTCCACGGT 61.064 61.111 6.85 0.00 40.23 4.83
529 535 2.124903 CTTATGTATGTCGGCGTCCAC 58.875 52.381 6.85 2.88 0.00 4.02
534 540 3.924686 GGGTTATCTTATGTATGTCGGCG 59.075 47.826 0.00 0.00 0.00 6.46
543 549 9.936329 AATGGAATTTACAGGGTTATCTTATGT 57.064 29.630 0.00 0.00 26.74 2.29
545 551 9.284968 CGAATGGAATTTACAGGGTTATCTTAT 57.715 33.333 0.00 0.00 36.07 1.73
549 555 6.937436 ACGAATGGAATTTACAGGGTTATC 57.063 37.500 0.00 0.00 36.07 1.75
550 556 8.680001 GTTTACGAATGGAATTTACAGGGTTAT 58.320 33.333 0.00 0.00 36.07 1.89
551 557 7.148440 CGTTTACGAATGGAATTTACAGGGTTA 60.148 37.037 0.00 0.00 43.02 2.85
552 558 6.348704 CGTTTACGAATGGAATTTACAGGGTT 60.349 38.462 0.00 0.00 43.02 4.11
553 559 5.122711 CGTTTACGAATGGAATTTACAGGGT 59.877 40.000 0.00 0.00 43.02 4.34
554 560 5.122711 ACGTTTACGAATGGAATTTACAGGG 59.877 40.000 9.53 0.00 43.02 4.45
555 561 6.173191 ACGTTTACGAATGGAATTTACAGG 57.827 37.500 9.53 0.00 43.02 4.00
556 562 6.898189 GCTACGTTTACGAATGGAATTTACAG 59.102 38.462 9.53 0.00 43.02 2.74
559 565 6.964741 TGCTACGTTTACGAATGGAATTTA 57.035 33.333 9.53 0.00 43.02 1.40
560 566 5.866335 TGCTACGTTTACGAATGGAATTT 57.134 34.783 9.53 0.00 43.02 1.82
561 567 6.255215 CAATGCTACGTTTACGAATGGAATT 58.745 36.000 9.53 0.00 43.02 2.17
562 568 5.729454 GCAATGCTACGTTTACGAATGGAAT 60.729 40.000 9.53 0.00 43.02 3.01
563 569 4.436317 GCAATGCTACGTTTACGAATGGAA 60.436 41.667 9.53 0.00 43.02 3.53
564 570 3.062909 GCAATGCTACGTTTACGAATGGA 59.937 43.478 9.53 0.60 43.02 3.41
565 571 3.063452 AGCAATGCTACGTTTACGAATGG 59.937 43.478 5.69 0.00 43.39 3.16
566 572 4.258935 AGCAATGCTACGTTTACGAATG 57.741 40.909 5.69 0.15 43.39 2.67
567 573 3.000078 CGAGCAATGCTACGTTTACGAAT 60.000 43.478 8.12 0.00 39.88 3.34
570 576 1.006391 CCGAGCAATGCTACGTTTACG 60.006 52.381 8.12 5.43 39.88 3.18
579 585 2.117156 GCATCACCCGAGCAATGCT 61.117 57.895 7.79 7.79 43.88 3.79
588 594 2.665649 TTGTACACTAGCATCACCCG 57.334 50.000 0.00 0.00 0.00 5.28
611 617 1.383456 TTTTGCCACGCACTGCTCTT 61.383 50.000 0.00 0.00 38.71 2.85
644 650 8.770438 TGTGCTTAAATCTGAAAAACAAAAGT 57.230 26.923 0.00 0.00 0.00 2.66
645 651 9.086336 TCTGTGCTTAAATCTGAAAAACAAAAG 57.914 29.630 0.00 0.00 0.00 2.27
647 653 8.031864 TGTCTGTGCTTAAATCTGAAAAACAAA 58.968 29.630 0.00 0.00 0.00 2.83
648 654 7.542890 TGTCTGTGCTTAAATCTGAAAAACAA 58.457 30.769 0.00 0.00 0.00 2.83
650 656 9.677567 TTATGTCTGTGCTTAAATCTGAAAAAC 57.322 29.630 0.00 0.00 0.00 2.43
653 659 9.453572 AGATTATGTCTGTGCTTAAATCTGAAA 57.546 29.630 0.00 0.00 35.31 2.69
656 662 9.317936 TGTAGATTATGTCTGTGCTTAAATCTG 57.682 33.333 0.00 0.00 37.83 2.90
662 668 7.342026 TCCTCTTGTAGATTATGTCTGTGCTTA 59.658 37.037 0.00 0.00 37.83 3.09
670 676 6.644592 GCTCATGTCCTCTTGTAGATTATGTC 59.355 42.308 0.00 0.00 0.00 3.06
676 682 3.378512 TGGCTCATGTCCTCTTGTAGAT 58.621 45.455 7.95 0.00 0.00 1.98
680 687 1.701847 AGTTGGCTCATGTCCTCTTGT 59.298 47.619 7.95 0.00 0.00 3.16
698 705 8.087750 TCTTTTTGTTTGTGTCTGAATTTGAGT 58.912 29.630 0.00 0.00 0.00 3.41
702 709 8.306761 ACTCTCTTTTTGTTTGTGTCTGAATTT 58.693 29.630 0.00 0.00 0.00 1.82
708 715 5.048083 TGCAACTCTCTTTTTGTTTGTGTCT 60.048 36.000 0.00 0.00 0.00 3.41
709 716 5.060940 GTGCAACTCTCTTTTTGTTTGTGTC 59.939 40.000 0.00 0.00 0.00 3.67
710 717 4.923281 GTGCAACTCTCTTTTTGTTTGTGT 59.077 37.500 0.00 0.00 0.00 3.72
711 718 4.327087 GGTGCAACTCTCTTTTTGTTTGTG 59.673 41.667 0.00 0.00 36.74 3.33
714 753 3.428862 CCGGTGCAACTCTCTTTTTGTTT 60.429 43.478 0.00 0.00 36.74 2.83
716 755 1.676006 CCGGTGCAACTCTCTTTTTGT 59.324 47.619 0.00 0.00 36.74 2.83
719 758 1.416401 TCTCCGGTGCAACTCTCTTTT 59.584 47.619 0.00 0.00 36.74 2.27
720 759 1.001406 CTCTCCGGTGCAACTCTCTTT 59.999 52.381 0.00 0.00 36.74 2.52
724 763 0.540830 ACTCTCTCCGGTGCAACTCT 60.541 55.000 0.00 0.00 36.74 3.24
733 772 1.739049 GCATCCAGACTCTCTCCGG 59.261 63.158 0.00 0.00 0.00 5.14
735 774 0.463620 GTGGCATCCAGACTCTCTCC 59.536 60.000 0.00 0.00 32.34 3.71
736 775 0.102120 CGTGGCATCCAGACTCTCTC 59.898 60.000 0.00 0.00 32.34 3.20
739 778 3.023949 GCCGTGGCATCCAGACTCT 62.024 63.158 5.89 0.00 41.49 3.24
740 779 2.512515 GCCGTGGCATCCAGACTC 60.513 66.667 5.89 0.00 41.49 3.36
741 780 4.101448 GGCCGTGGCATCCAGACT 62.101 66.667 13.76 0.00 44.11 3.24
742 781 4.408821 TGGCCGTGGCATCCAGAC 62.409 66.667 13.76 0.00 44.11 3.51
743 782 4.408821 GTGGCCGTGGCATCCAGA 62.409 66.667 13.76 0.00 44.11 3.86
772 811 1.318158 ATTGGTTGGCTGCTGCTAGC 61.318 55.000 15.64 8.10 42.82 3.42
773 812 0.454600 CATTGGTTGGCTGCTGCTAG 59.545 55.000 15.64 0.00 39.59 3.42
774 813 0.966875 CCATTGGTTGGCTGCTGCTA 60.967 55.000 15.64 6.53 39.09 3.49
775 814 2.280552 CCATTGGTTGGCTGCTGCT 61.281 57.895 15.64 0.00 39.09 4.24
776 815 2.263540 CCATTGGTTGGCTGCTGC 59.736 61.111 7.10 7.10 39.09 5.25
777 816 1.186917 TTCCCATTGGTTGGCTGCTG 61.187 55.000 1.20 0.00 44.97 4.41
782 859 2.261361 GCGTTCCCATTGGTTGGC 59.739 61.111 1.20 0.00 44.97 4.52
802 879 0.953960 GATCCGTGGCGTGAAGGTTT 60.954 55.000 0.00 0.00 0.00 3.27
808 885 1.080093 GAAGTGATCCGTGGCGTGA 60.080 57.895 0.00 0.00 0.00 4.35
843 944 4.489771 GGCGGTGGGGATCTGGTG 62.490 72.222 0.00 0.00 0.00 4.17
891 992 3.787001 GCTTCGGGAGGGGAGGTG 61.787 72.222 0.00 0.00 0.00 4.00
895 996 4.707768 TTCGGCTTCGGGAGGGGA 62.708 66.667 0.00 0.00 34.13 4.81
899 1000 3.023591 GCGTTTTCGGCTTCGGGAG 62.024 63.158 0.00 0.00 44.29 4.30
910 1011 3.028366 GAGCGAGCCTGGCGTTTTC 62.028 63.158 13.96 4.19 35.00 2.29
961 1094 0.751643 GATGGGGAATGTGGAACCGG 60.752 60.000 0.00 0.00 34.36 5.28
963 1096 0.334676 TGGATGGGGAATGTGGAACC 59.665 55.000 0.00 0.00 34.36 3.62
965 1098 1.284785 GAGTGGATGGGGAATGTGGAA 59.715 52.381 0.00 0.00 0.00 3.53
966 1099 0.918983 GAGTGGATGGGGAATGTGGA 59.081 55.000 0.00 0.00 0.00 4.02
967 1100 0.106519 GGAGTGGATGGGGAATGTGG 60.107 60.000 0.00 0.00 0.00 4.17
969 1102 1.381867 TTGGAGTGGATGGGGAATGT 58.618 50.000 0.00 0.00 0.00 2.71
991 1124 1.153249 GATTGCGTCGGGGATTGGA 60.153 57.895 0.00 0.00 0.00 3.53
1001 1153 0.313672 TTTGCTTGGTGGATTGCGTC 59.686 50.000 0.00 0.00 0.00 5.19
1002 1154 0.031994 GTTTGCTTGGTGGATTGCGT 59.968 50.000 0.00 0.00 0.00 5.24
1004 1156 0.320683 GGGTTTGCTTGGTGGATTGC 60.321 55.000 0.00 0.00 0.00 3.56
1581 1739 2.158900 ACATTAGCTGGGACGAGGAATG 60.159 50.000 0.00 0.00 0.00 2.67
1591 1749 5.880332 ACACTACAACATAACATTAGCTGGG 59.120 40.000 0.00 0.00 0.00 4.45
1701 1892 3.308530 GGTTCGCTGATTTTCAAGGTTG 58.691 45.455 0.00 0.00 0.00 3.77
1707 1899 1.334599 GCAACGGTTCGCTGATTTTCA 60.335 47.619 7.68 0.00 0.00 2.69
1716 1908 1.134694 GGATGAAGCAACGGTTCGC 59.865 57.895 7.05 7.05 42.15 4.70
1722 1914 2.480555 GCCGTGGATGAAGCAACG 59.519 61.111 0.00 0.00 35.85 4.10
1811 2012 2.008329 CTGAGGAGCAACAGAAGCATC 58.992 52.381 0.00 0.00 36.38 3.91
1819 2020 0.689055 AGCATGACTGAGGAGCAACA 59.311 50.000 0.00 0.00 0.00 3.33
1830 2031 6.042638 ACTAATTGTGACAGTAGCATGACT 57.957 37.500 0.00 0.00 0.00 3.41
1895 2103 3.103447 TCAGAGACTTCAGTTGCAGTG 57.897 47.619 0.00 0.00 0.00 3.66
1990 2227 3.545703 GAGGGATAATGAACACTGGTGG 58.454 50.000 5.70 0.00 34.19 4.61
2019 3224 2.047655 TAGCGTGCCCTGTTTCCG 60.048 61.111 0.00 0.00 0.00 4.30
2197 3415 6.440328 ACCCCTTCATATTTTGCTTGTGTATT 59.560 34.615 0.00 0.00 0.00 1.89
2216 3434 1.889262 GCCAATACGGTTTCACCCCTT 60.889 52.381 0.00 0.00 33.75 3.95
2248 3466 7.230849 TCAAATTTCAGATGTAGTTTGGCAT 57.769 32.000 7.31 0.00 0.00 4.40
2254 3472 8.463930 TTCAACCTCAAATTTCAGATGTAGTT 57.536 30.769 0.00 0.00 0.00 2.24
2267 3485 8.877864 TGGTACAAGATAATTCAACCTCAAAT 57.122 30.769 0.00 0.00 31.92 2.32
2314 3532 9.651913 AGTTCTAAGAAGCATTTTGTTGAAAAA 57.348 25.926 0.00 0.00 34.72 1.94
2352 3570 4.037923 CACCTTCCACATTGCAGTTAAACT 59.962 41.667 0.00 0.00 0.00 2.66
2353 3571 4.298332 CACCTTCCACATTGCAGTTAAAC 58.702 43.478 0.00 0.00 0.00 2.01
2354 3572 3.243704 GCACCTTCCACATTGCAGTTAAA 60.244 43.478 0.00 0.00 34.97 1.52
2355 3573 2.295909 GCACCTTCCACATTGCAGTTAA 59.704 45.455 0.00 0.00 34.97 2.01
2356 3574 1.885887 GCACCTTCCACATTGCAGTTA 59.114 47.619 0.00 0.00 34.97 2.24
2357 3575 0.675633 GCACCTTCCACATTGCAGTT 59.324 50.000 0.00 0.00 34.97 3.16
2358 3576 0.467844 TGCACCTTCCACATTGCAGT 60.468 50.000 0.00 0.00 40.01 4.40
2359 3577 0.675083 TTGCACCTTCCACATTGCAG 59.325 50.000 0.00 0.00 45.29 4.41
2360 3578 1.117994 TTTGCACCTTCCACATTGCA 58.882 45.000 0.00 0.00 43.11 4.08
2361 3579 2.070783 CATTTGCACCTTCCACATTGC 58.929 47.619 0.00 0.00 35.45 3.56
2362 3580 2.070783 GCATTTGCACCTTCCACATTG 58.929 47.619 0.00 0.00 41.59 2.82
2363 3581 1.002315 GGCATTTGCACCTTCCACATT 59.998 47.619 4.74 0.00 44.36 2.71
2364 3582 0.609662 GGCATTTGCACCTTCCACAT 59.390 50.000 4.74 0.00 44.36 3.21
2365 3583 1.804396 CGGCATTTGCACCTTCCACA 61.804 55.000 4.74 0.00 44.36 4.17
2366 3584 1.080569 CGGCATTTGCACCTTCCAC 60.081 57.895 4.74 0.00 44.36 4.02
2367 3585 2.929903 GCGGCATTTGCACCTTCCA 61.930 57.895 4.74 0.00 44.36 3.53
2368 3586 2.125952 GCGGCATTTGCACCTTCC 60.126 61.111 4.74 0.00 44.36 3.46
2369 3587 0.455410 TATGCGGCATTTGCACCTTC 59.545 50.000 21.99 0.00 46.57 3.46
2370 3588 0.894141 TTATGCGGCATTTGCACCTT 59.106 45.000 21.99 0.00 46.57 3.50
2371 3589 0.894141 TTTATGCGGCATTTGCACCT 59.106 45.000 21.99 0.00 46.57 4.00
2372 3590 1.719600 TTTTATGCGGCATTTGCACC 58.280 45.000 21.99 0.00 46.57 5.01
2373 3591 2.478134 TGTTTTTATGCGGCATTTGCAC 59.522 40.909 21.99 13.26 46.57 4.57
2375 3593 3.802722 TTGTTTTTATGCGGCATTTGC 57.197 38.095 21.99 8.05 41.14 3.68
2378 3596 9.539825 TGATAATATTTGTTTTTATGCGGCATT 57.460 25.926 21.99 5.49 0.00 3.56
2379 3597 8.977505 GTGATAATATTTGTTTTTATGCGGCAT 58.022 29.630 20.57 20.57 0.00 4.40
2380 3598 7.976175 TGTGATAATATTTGTTTTTATGCGGCA 59.024 29.630 4.58 4.58 0.00 5.69
2381 3599 8.265998 GTGTGATAATATTTGTTTTTATGCGGC 58.734 33.333 0.00 0.00 0.00 6.53
2382 3600 8.468349 CGTGTGATAATATTTGTTTTTATGCGG 58.532 33.333 0.00 0.00 0.00 5.69
2383 3601 9.216087 TCGTGTGATAATATTTGTTTTTATGCG 57.784 29.630 0.00 0.00 0.00 4.73
2386 3604 9.217223 GCGTCGTGTGATAATATTTGTTTTTAT 57.783 29.630 0.00 0.00 0.00 1.40
2387 3605 7.423030 CGCGTCGTGTGATAATATTTGTTTTTA 59.577 33.333 0.00 0.00 0.00 1.52
2388 3606 6.247582 CGCGTCGTGTGATAATATTTGTTTTT 59.752 34.615 0.00 0.00 0.00 1.94
2389 3607 5.730802 CGCGTCGTGTGATAATATTTGTTTT 59.269 36.000 0.00 0.00 0.00 2.43
2390 3608 5.062433 TCGCGTCGTGTGATAATATTTGTTT 59.938 36.000 5.77 0.00 30.48 2.83
2391 3609 4.563580 TCGCGTCGTGTGATAATATTTGTT 59.436 37.500 5.77 0.00 30.48 2.83
2392 3610 4.106909 TCGCGTCGTGTGATAATATTTGT 58.893 39.130 5.77 0.00 30.48 2.83
2393 3611 4.685824 TCGCGTCGTGTGATAATATTTG 57.314 40.909 5.77 0.00 30.48 2.32
2394 3612 5.900339 AATCGCGTCGTGTGATAATATTT 57.100 34.783 5.77 0.00 46.95 1.40
2395 3613 5.900339 AAATCGCGTCGTGTGATAATATT 57.100 34.783 5.77 0.00 46.95 1.28
2396 3614 7.576750 AATAAATCGCGTCGTGTGATAATAT 57.423 32.000 5.77 6.63 46.95 1.28
2397 3615 6.996562 AATAAATCGCGTCGTGTGATAATA 57.003 33.333 5.77 5.06 46.95 0.98
2398 3616 5.900339 AATAAATCGCGTCGTGTGATAAT 57.100 34.783 5.77 2.88 46.95 1.28
2399 3617 6.200808 TCTAATAAATCGCGTCGTGTGATAA 58.799 36.000 5.77 1.03 46.95 1.75
2400 3618 5.750650 TCTAATAAATCGCGTCGTGTGATA 58.249 37.500 5.77 0.00 46.95 2.15
2402 3620 4.018649 TCTAATAAATCGCGTCGTGTGA 57.981 40.909 5.77 0.00 42.30 3.58
2403 3621 4.033019 TCTCTAATAAATCGCGTCGTGTG 58.967 43.478 5.77 0.00 0.00 3.82
2404 3622 4.282950 TCTCTAATAAATCGCGTCGTGT 57.717 40.909 5.77 0.00 0.00 4.49
2405 3623 5.615495 TTTCTCTAATAAATCGCGTCGTG 57.385 39.130 5.77 0.00 0.00 4.35
2406 3624 7.410513 GCATATTTCTCTAATAAATCGCGTCGT 60.411 37.037 5.77 0.00 32.63 4.34
2407 3625 6.889833 GCATATTTCTCTAATAAATCGCGTCG 59.110 38.462 5.77 0.00 32.63 5.12
2408 3626 7.729836 TGCATATTTCTCTAATAAATCGCGTC 58.270 34.615 5.77 0.00 32.63 5.19
2409 3627 7.652300 TGCATATTTCTCTAATAAATCGCGT 57.348 32.000 5.77 0.00 32.63 6.01
2410 3628 8.223769 ACTTGCATATTTCTCTAATAAATCGCG 58.776 33.333 0.00 0.00 32.63 5.87
2411 3629 9.322776 CACTTGCATATTTCTCTAATAAATCGC 57.677 33.333 0.00 0.00 32.63 4.58
2418 3636 9.107177 CTTCAGTCACTTGCATATTTCTCTAAT 57.893 33.333 0.00 0.00 0.00 1.73
2419 3637 8.314021 TCTTCAGTCACTTGCATATTTCTCTAA 58.686 33.333 0.00 0.00 0.00 2.10
2420 3638 7.840931 TCTTCAGTCACTTGCATATTTCTCTA 58.159 34.615 0.00 0.00 0.00 2.43
2421 3639 6.705302 TCTTCAGTCACTTGCATATTTCTCT 58.295 36.000 0.00 0.00 0.00 3.10
2422 3640 6.974932 TCTTCAGTCACTTGCATATTTCTC 57.025 37.500 0.00 0.00 0.00 2.87
2423 3641 7.337167 AGATCTTCAGTCACTTGCATATTTCT 58.663 34.615 0.00 0.00 0.00 2.52
2424 3642 7.551035 AGATCTTCAGTCACTTGCATATTTC 57.449 36.000 0.00 0.00 0.00 2.17
2425 3643 7.828223 AGAAGATCTTCAGTCACTTGCATATTT 59.172 33.333 31.79 7.08 41.84 1.40
2426 3644 7.337167 AGAAGATCTTCAGTCACTTGCATATT 58.663 34.615 31.79 7.43 41.84 1.28
2427 3645 6.887013 AGAAGATCTTCAGTCACTTGCATAT 58.113 36.000 31.79 8.03 41.84 1.78
2428 3646 6.291648 AGAAGATCTTCAGTCACTTGCATA 57.708 37.500 31.79 0.00 41.84 3.14
2429 3647 5.163281 AGAAGATCTTCAGTCACTTGCAT 57.837 39.130 31.79 8.62 41.84 3.96
2430 3648 4.613925 AGAAGATCTTCAGTCACTTGCA 57.386 40.909 31.79 0.00 41.84 4.08
2431 3649 6.870965 TCTTTAGAAGATCTTCAGTCACTTGC 59.129 38.462 31.79 6.78 41.84 4.01
2432 3650 8.824159 TTCTTTAGAAGATCTTCAGTCACTTG 57.176 34.615 31.79 15.56 41.84 3.16
2448 3666 3.008049 GCTCTGTCACCCCTTCTTTAGAA 59.992 47.826 0.00 0.00 0.00 2.10
2449 3667 2.567615 GCTCTGTCACCCCTTCTTTAGA 59.432 50.000 0.00 0.00 0.00 2.10
2450 3668 2.355209 GGCTCTGTCACCCCTTCTTTAG 60.355 54.545 0.00 0.00 0.00 1.85
2451 3669 1.628846 GGCTCTGTCACCCCTTCTTTA 59.371 52.381 0.00 0.00 0.00 1.85
2452 3670 0.402121 GGCTCTGTCACCCCTTCTTT 59.598 55.000 0.00 0.00 0.00 2.52
2453 3671 0.768221 TGGCTCTGTCACCCCTTCTT 60.768 55.000 0.00 0.00 0.00 2.52
2454 3672 0.768221 TTGGCTCTGTCACCCCTTCT 60.768 55.000 0.00 0.00 0.00 2.85
2455 3673 0.606673 GTTGGCTCTGTCACCCCTTC 60.607 60.000 0.00 0.00 0.00 3.46
2456 3674 1.062488 AGTTGGCTCTGTCACCCCTT 61.062 55.000 0.00 0.00 0.00 3.95
2457 3675 1.462238 AGTTGGCTCTGTCACCCCT 60.462 57.895 0.00 0.00 0.00 4.79
2458 3676 1.302832 CAGTTGGCTCTGTCACCCC 60.303 63.158 2.95 0.00 0.00 4.95
2459 3677 1.302832 CCAGTTGGCTCTGTCACCC 60.303 63.158 8.78 0.00 34.02 4.61
2460 3678 0.886490 CACCAGTTGGCTCTGTCACC 60.886 60.000 0.00 0.00 39.32 4.02
2461 3679 0.179045 ACACCAGTTGGCTCTGTCAC 60.179 55.000 0.00 0.00 39.32 3.67
2462 3680 0.106708 GACACCAGTTGGCTCTGTCA 59.893 55.000 12.82 0.00 39.32 3.58
2463 3681 0.603975 GGACACCAGTTGGCTCTGTC 60.604 60.000 10.39 10.39 39.32 3.51
2464 3682 1.451936 GGACACCAGTTGGCTCTGT 59.548 57.895 0.00 0.00 39.32 3.41
2465 3683 1.302832 GGGACACCAGTTGGCTCTG 60.303 63.158 0.00 3.90 39.32 3.35
2466 3684 1.770110 TGGGACACCAGTTGGCTCT 60.770 57.895 0.00 0.00 43.37 4.09
2467 3685 2.836154 TGGGACACCAGTTGGCTC 59.164 61.111 0.00 0.00 43.37 4.70
2478 3696 3.263369 TTCTAGTGTTAGGGTGGGACA 57.737 47.619 0.00 0.00 0.00 4.02
2479 3697 6.496144 AATATTCTAGTGTTAGGGTGGGAC 57.504 41.667 0.00 0.00 0.00 4.46
2480 3698 5.303589 CGAATATTCTAGTGTTAGGGTGGGA 59.696 44.000 13.45 0.00 0.00 4.37
2481 3699 5.510861 CCGAATATTCTAGTGTTAGGGTGGG 60.511 48.000 13.45 0.00 0.00 4.61
2482 3700 5.539048 CCGAATATTCTAGTGTTAGGGTGG 58.461 45.833 13.45 0.00 0.00 4.61
2483 3701 4.989168 GCCGAATATTCTAGTGTTAGGGTG 59.011 45.833 13.45 0.00 0.00 4.61
2484 3702 4.652421 TGCCGAATATTCTAGTGTTAGGGT 59.348 41.667 13.45 0.00 0.00 4.34
2485 3703 4.989168 GTGCCGAATATTCTAGTGTTAGGG 59.011 45.833 13.45 5.11 0.00 3.53
2486 3704 5.844004 AGTGCCGAATATTCTAGTGTTAGG 58.156 41.667 13.45 5.77 0.00 2.69
2487 3705 6.740110 AGAGTGCCGAATATTCTAGTGTTAG 58.260 40.000 13.45 0.00 0.00 2.34
2488 3706 6.710597 AGAGTGCCGAATATTCTAGTGTTA 57.289 37.500 13.45 0.00 0.00 2.41
2489 3707 5.599999 AGAGTGCCGAATATTCTAGTGTT 57.400 39.130 13.45 0.00 0.00 3.32
2490 3708 5.599999 AAGAGTGCCGAATATTCTAGTGT 57.400 39.130 13.45 0.00 0.00 3.55
2491 3709 5.625721 CGTAAGAGTGCCGAATATTCTAGTG 59.374 44.000 13.45 0.00 43.02 2.74
2492 3710 5.530171 TCGTAAGAGTGCCGAATATTCTAGT 59.470 40.000 13.45 3.14 45.01 2.57
2493 3711 5.998553 TCGTAAGAGTGCCGAATATTCTAG 58.001 41.667 13.45 6.02 45.01 2.43
2495 3713 4.913335 TCGTAAGAGTGCCGAATATTCT 57.087 40.909 13.45 0.00 45.01 2.40
2510 3728 7.576236 AGAGATGTTCAAAATTGTGTCGTAAG 58.424 34.615 0.00 0.00 0.00 2.34
2511 3729 7.490962 AGAGATGTTCAAAATTGTGTCGTAA 57.509 32.000 0.00 0.00 0.00 3.18
2512 3730 7.490962 AAGAGATGTTCAAAATTGTGTCGTA 57.509 32.000 0.00 0.00 0.00 3.43
2513 3731 6.377327 AAGAGATGTTCAAAATTGTGTCGT 57.623 33.333 0.00 0.00 0.00 4.34
2514 3732 6.692681 ACAAAGAGATGTTCAAAATTGTGTCG 59.307 34.615 0.00 0.00 0.00 4.35
2515 3733 7.992180 ACAAAGAGATGTTCAAAATTGTGTC 57.008 32.000 0.00 0.00 0.00 3.67
2550 3768 8.310382 CGGTCTGAAGATTCTTCCAGATATATT 58.690 37.037 20.87 0.00 37.88 1.28
2551 3769 7.453126 ACGGTCTGAAGATTCTTCCAGATATAT 59.547 37.037 20.87 9.74 37.88 0.86
2552 3770 6.778069 ACGGTCTGAAGATTCTTCCAGATATA 59.222 38.462 20.87 2.75 37.88 0.86
2553 3771 5.600484 ACGGTCTGAAGATTCTTCCAGATAT 59.400 40.000 20.87 11.23 37.88 1.63
2554 3772 4.956700 ACGGTCTGAAGATTCTTCCAGATA 59.043 41.667 20.87 4.03 37.88 1.98
2555 3773 3.772025 ACGGTCTGAAGATTCTTCCAGAT 59.228 43.478 20.87 8.49 37.88 2.90
2556 3774 3.056536 CACGGTCTGAAGATTCTTCCAGA 60.057 47.826 20.87 18.84 33.72 3.86
2557 3775 3.056536 TCACGGTCTGAAGATTCTTCCAG 60.057 47.826 20.87 17.28 0.00 3.86
2558 3776 2.897326 TCACGGTCTGAAGATTCTTCCA 59.103 45.455 20.87 10.10 0.00 3.53
2559 3777 3.594603 TCACGGTCTGAAGATTCTTCC 57.405 47.619 20.87 7.68 0.00 3.46
2560 3778 7.596995 CCTAATATCACGGTCTGAAGATTCTTC 59.403 40.741 17.76 17.76 30.60 2.87
2561 3779 7.287927 TCCTAATATCACGGTCTGAAGATTCTT 59.712 37.037 0.00 0.00 30.60 2.52
2562 3780 6.778069 TCCTAATATCACGGTCTGAAGATTCT 59.222 38.462 0.00 0.00 30.60 2.40
2563 3781 6.982852 TCCTAATATCACGGTCTGAAGATTC 58.017 40.000 0.00 0.00 30.60 2.52
2564 3782 6.978674 TCCTAATATCACGGTCTGAAGATT 57.021 37.500 0.00 0.00 30.60 2.40
2565 3783 8.651589 TTATCCTAATATCACGGTCTGAAGAT 57.348 34.615 0.00 0.00 30.60 2.40
2566 3784 8.651589 ATTATCCTAATATCACGGTCTGAAGA 57.348 34.615 0.00 0.00 30.60 2.87
2570 3788 9.035607 GCAATATTATCCTAATATCACGGTCTG 57.964 37.037 0.00 0.00 0.00 3.51
2571 3789 8.982723 AGCAATATTATCCTAATATCACGGTCT 58.017 33.333 0.00 0.00 0.00 3.85
2572 3790 9.601217 AAGCAATATTATCCTAATATCACGGTC 57.399 33.333 0.00 0.00 0.00 4.79
2573 3791 9.959721 AAAGCAATATTATCCTAATATCACGGT 57.040 29.630 0.00 0.00 0.00 4.83
2577 3795 9.979897 AGCCAAAGCAATATTATCCTAATATCA 57.020 29.630 0.00 0.00 43.56 2.15
2581 3799 9.146586 TCAAAGCCAAAGCAATATTATCCTAAT 57.853 29.630 0.00 0.00 43.56 1.73
2582 3800 8.532186 TCAAAGCCAAAGCAATATTATCCTAA 57.468 30.769 0.00 0.00 43.56 2.69
2583 3801 8.710749 ATCAAAGCCAAAGCAATATTATCCTA 57.289 30.769 0.00 0.00 43.56 2.94
2584 3802 7.607615 ATCAAAGCCAAAGCAATATTATCCT 57.392 32.000 0.00 0.00 43.56 3.24
2585 3803 8.553696 CAAATCAAAGCCAAAGCAATATTATCC 58.446 33.333 0.00 0.00 43.56 2.59
2586 3804 8.066000 GCAAATCAAAGCCAAAGCAATATTATC 58.934 33.333 0.00 0.00 43.56 1.75
2587 3805 7.922837 GCAAATCAAAGCCAAAGCAATATTAT 58.077 30.769 0.00 0.00 43.56 1.28
2588 3806 7.306205 GCAAATCAAAGCCAAAGCAATATTA 57.694 32.000 0.00 0.00 43.56 0.98
2589 3807 6.185852 GCAAATCAAAGCCAAAGCAATATT 57.814 33.333 0.00 0.00 43.56 1.28
2590 3808 5.806366 GCAAATCAAAGCCAAAGCAATAT 57.194 34.783 0.00 0.00 43.56 1.28
2601 3819 1.134610 CAGGGATGGGCAAATCAAAGC 60.135 52.381 2.38 0.00 0.00 3.51
2602 3820 2.167075 GACAGGGATGGGCAAATCAAAG 59.833 50.000 2.38 0.00 0.00 2.77
2603 3821 2.178580 GACAGGGATGGGCAAATCAAA 58.821 47.619 2.38 0.00 0.00 2.69
2604 3822 1.619432 GGACAGGGATGGGCAAATCAA 60.619 52.381 2.38 0.00 0.00 2.57
2605 3823 0.033208 GGACAGGGATGGGCAAATCA 60.033 55.000 2.38 0.00 0.00 2.57
2606 3824 0.259938 AGGACAGGGATGGGCAAATC 59.740 55.000 0.00 0.00 0.00 2.17
2607 3825 0.032813 CAGGACAGGGATGGGCAAAT 60.033 55.000 0.00 0.00 0.00 2.32
2608 3826 1.139498 TCAGGACAGGGATGGGCAAA 61.139 55.000 0.00 0.00 0.00 3.68
2609 3827 0.920763 ATCAGGACAGGGATGGGCAA 60.921 55.000 0.00 0.00 0.00 4.52
2610 3828 1.308128 ATCAGGACAGGGATGGGCA 60.308 57.895 0.00 0.00 0.00 5.36
2611 3829 1.348008 TGATCAGGACAGGGATGGGC 61.348 60.000 0.00 0.00 0.00 5.36
2612 3830 1.216064 TTGATCAGGACAGGGATGGG 58.784 55.000 0.00 0.00 0.00 4.00
2613 3831 3.589951 ATTTGATCAGGACAGGGATGG 57.410 47.619 0.00 0.00 0.00 3.51
2614 3832 6.208204 GGAATTATTTGATCAGGACAGGGATG 59.792 42.308 0.00 0.00 0.00 3.51
2615 3833 6.103797 AGGAATTATTTGATCAGGACAGGGAT 59.896 38.462 0.00 0.00 0.00 3.85
2616 3834 5.433051 AGGAATTATTTGATCAGGACAGGGA 59.567 40.000 0.00 0.00 0.00 4.20
2617 3835 5.699143 AGGAATTATTTGATCAGGACAGGG 58.301 41.667 0.00 0.00 0.00 4.45
2618 3836 6.830324 TCAAGGAATTATTTGATCAGGACAGG 59.170 38.462 0.00 0.00 0.00 4.00
2619 3837 7.870509 TCAAGGAATTATTTGATCAGGACAG 57.129 36.000 0.00 0.00 0.00 3.51
2620 3838 8.827832 ATTCAAGGAATTATTTGATCAGGACA 57.172 30.769 0.00 0.00 33.68 4.02
2637 3855 9.936759 ACAGTTTCTTTGTTTTAAATTCAAGGA 57.063 25.926 11.50 11.50 0.00 3.36
2641 3859 9.284594 CGAGACAGTTTCTTTGTTTTAAATTCA 57.715 29.630 0.00 0.00 33.22 2.57
2642 3860 9.498307 TCGAGACAGTTTCTTTGTTTTAAATTC 57.502 29.630 0.00 0.00 33.22 2.17
2643 3861 9.849166 TTCGAGACAGTTTCTTTGTTTTAAATT 57.151 25.926 0.00 0.00 33.22 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.