Multiple sequence alignment - TraesCS6B01G084400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G084400 chr6B 100.000 2980 0 0 1 2980 61491760 61494739 0.000000e+00 5504
1 TraesCS6B01G084400 chr6D 92.721 2473 110 25 535 2978 28702254 28699823 0.000000e+00 3506
2 TraesCS6B01G084400 chr6A 93.583 2244 86 21 762 2978 33952393 33954605 0.000000e+00 3293
3 TraesCS6B01G084400 chr6A 87.293 181 14 5 536 715 33952222 33952394 6.520000e-47 198
4 TraesCS6B01G084400 chr2D 87.876 932 94 10 1470 2395 248777383 248776465 0.000000e+00 1077
5 TraesCS6B01G084400 chr2A 87.380 935 94 14 1470 2398 288988198 288987282 0.000000e+00 1051
6 TraesCS6B01G084400 chr5D 91.154 667 47 6 2010 2672 539743483 539742825 0.000000e+00 894
7 TraesCS6B01G084400 chr5D 96.552 87 2 1 2892 2978 539742508 539742423 3.100000e-30 143
8 TraesCS6B01G084400 chr3A 91.433 642 45 5 2008 2647 94173874 94173241 0.000000e+00 872
9 TraesCS6B01G084400 chr3A 98.020 101 2 0 2877 2977 94172971 94172871 3.050000e-40 176
10 TraesCS6B01G084400 chr1A 89.853 680 55 6 2001 2676 17885223 17884554 0.000000e+00 861
11 TraesCS6B01G084400 chr1A 96.078 102 3 1 2877 2978 17884537 17884437 6.610000e-37 165
12 TraesCS6B01G084400 chr3B 89.778 675 54 8 2001 2669 735003779 735003114 0.000000e+00 850
13 TraesCS6B01G084400 chr3B 93.466 352 20 3 2001 2351 735004599 735004250 1.220000e-143 520
14 TraesCS6B01G084400 chr3B 93.137 102 7 0 2877 2978 735002827 735002726 1.850000e-32 150


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G084400 chr6B 61491760 61494739 2979 False 5504.000000 5504 100.0000 1 2980 1 chr6B.!!$F1 2979
1 TraesCS6B01G084400 chr6D 28699823 28702254 2431 True 3506.000000 3506 92.7210 535 2978 1 chr6D.!!$R1 2443
2 TraesCS6B01G084400 chr6A 33952222 33954605 2383 False 1745.500000 3293 90.4380 536 2978 2 chr6A.!!$F1 2442
3 TraesCS6B01G084400 chr2D 248776465 248777383 918 True 1077.000000 1077 87.8760 1470 2395 1 chr2D.!!$R1 925
4 TraesCS6B01G084400 chr2A 288987282 288988198 916 True 1051.000000 1051 87.3800 1470 2398 1 chr2A.!!$R1 928
5 TraesCS6B01G084400 chr5D 539742423 539743483 1060 True 518.500000 894 93.8530 2010 2978 2 chr5D.!!$R1 968
6 TraesCS6B01G084400 chr3A 94172871 94173874 1003 True 524.000000 872 94.7265 2008 2977 2 chr3A.!!$R1 969
7 TraesCS6B01G084400 chr1A 17884437 17885223 786 True 513.000000 861 92.9655 2001 2978 2 chr1A.!!$R1 977
8 TraesCS6B01G084400 chr3B 735002726 735004599 1873 True 506.666667 850 92.1270 2001 2978 3 chr3B.!!$R1 977

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
328 329 0.025001 GTTGAATGCGGTGTCGATCG 59.975 55.0 9.36 9.36 39.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1996 2028 0.250793 TCAACACACCGACAACAGGT 59.749 50.0 0.0 0.0 43.97 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 6.499234 AACAATATGCTGCAAAAATTTCCC 57.501 33.333 6.36 0.00 0.00 3.97
27 28 5.807909 ACAATATGCTGCAAAAATTTCCCT 58.192 33.333 6.36 0.00 0.00 4.20
28 29 6.240145 ACAATATGCTGCAAAAATTTCCCTT 58.760 32.000 6.36 0.00 0.00 3.95
29 30 6.716173 ACAATATGCTGCAAAAATTTCCCTTT 59.284 30.769 6.36 0.00 0.00 3.11
30 31 7.882271 ACAATATGCTGCAAAAATTTCCCTTTA 59.118 29.630 6.36 0.00 0.00 1.85
31 32 8.728833 CAATATGCTGCAAAAATTTCCCTTTAA 58.271 29.630 6.36 0.00 0.00 1.52
32 33 8.860780 ATATGCTGCAAAAATTTCCCTTTAAA 57.139 26.923 6.36 0.00 0.00 1.52
33 34 6.616774 TGCTGCAAAAATTTCCCTTTAAAG 57.383 33.333 8.32 8.32 0.00 1.85
34 35 6.118852 TGCTGCAAAAATTTCCCTTTAAAGT 58.881 32.000 14.03 0.00 0.00 2.66
35 36 6.601217 TGCTGCAAAAATTTCCCTTTAAAGTT 59.399 30.769 14.03 0.00 0.00 2.66
36 37 7.121907 TGCTGCAAAAATTTCCCTTTAAAGTTT 59.878 29.630 14.03 4.92 38.02 2.66
37 38 7.973388 GCTGCAAAAATTTCCCTTTAAAGTTTT 59.027 29.630 14.03 10.23 43.46 2.43
41 42 6.952773 AAATTTCCCTTTAAAGTTTTGGGC 57.047 33.333 14.03 0.00 37.83 5.36
42 43 5.904984 ATTTCCCTTTAAAGTTTTGGGCT 57.095 34.783 14.03 0.00 37.83 5.19
43 44 7.381789 AATTTCCCTTTAAAGTTTTGGGCTA 57.618 32.000 14.03 1.22 37.83 3.93
44 45 5.794726 TTCCCTTTAAAGTTTTGGGCTAC 57.205 39.130 14.03 0.00 37.83 3.58
45 46 5.069518 TCCCTTTAAAGTTTTGGGCTACT 57.930 39.130 14.03 0.00 37.83 2.57
46 47 5.460416 TCCCTTTAAAGTTTTGGGCTACTT 58.540 37.500 14.03 0.00 37.83 2.24
47 48 5.537295 TCCCTTTAAAGTTTTGGGCTACTTC 59.463 40.000 14.03 0.00 37.83 3.01
48 49 5.303333 CCCTTTAAAGTTTTGGGCTACTTCA 59.697 40.000 14.03 0.00 33.66 3.02
49 50 6.183360 CCCTTTAAAGTTTTGGGCTACTTCAA 60.183 38.462 14.03 0.00 33.66 2.69
50 51 6.923508 CCTTTAAAGTTTTGGGCTACTTCAAG 59.076 38.462 14.03 0.00 33.66 3.02
51 52 4.937201 AAAGTTTTGGGCTACTTCAAGG 57.063 40.909 0.00 0.00 33.66 3.61
52 53 2.876581 AGTTTTGGGCTACTTCAAGGG 58.123 47.619 0.00 0.00 0.00 3.95
53 54 2.177016 AGTTTTGGGCTACTTCAAGGGT 59.823 45.455 0.00 0.00 0.00 4.34
54 55 3.396611 AGTTTTGGGCTACTTCAAGGGTA 59.603 43.478 0.00 0.00 0.00 3.69
55 56 4.141111 AGTTTTGGGCTACTTCAAGGGTAA 60.141 41.667 0.00 0.00 0.00 2.85
56 57 3.428413 TTGGGCTACTTCAAGGGTAAC 57.572 47.619 0.00 0.00 0.00 2.50
72 73 4.801330 GGTAACCTCCCAAAAATTCTGG 57.199 45.455 0.38 0.38 0.00 3.86
73 74 4.157246 GGTAACCTCCCAAAAATTCTGGT 58.843 43.478 5.94 0.00 31.45 4.00
74 75 5.326900 GGTAACCTCCCAAAAATTCTGGTA 58.673 41.667 5.94 0.00 31.45 3.25
75 76 5.955959 GGTAACCTCCCAAAAATTCTGGTAT 59.044 40.000 5.94 0.00 31.45 2.73
76 77 6.439375 GGTAACCTCCCAAAAATTCTGGTATT 59.561 38.462 5.94 0.00 31.45 1.89
77 78 7.038587 GGTAACCTCCCAAAAATTCTGGTATTT 60.039 37.037 5.94 0.00 31.45 1.40
78 79 9.027202 GTAACCTCCCAAAAATTCTGGTATTTA 57.973 33.333 5.94 0.00 31.45 1.40
79 80 7.476540 ACCTCCCAAAAATTCTGGTATTTAC 57.523 36.000 5.94 0.00 31.45 2.01
80 81 7.013834 ACCTCCCAAAAATTCTGGTATTTACA 58.986 34.615 5.94 0.00 31.45 2.41
81 82 7.511028 ACCTCCCAAAAATTCTGGTATTTACAA 59.489 33.333 5.94 0.00 31.45 2.41
82 83 8.371699 CCTCCCAAAAATTCTGGTATTTACAAA 58.628 33.333 5.94 0.00 31.45 2.83
83 84 9.771534 CTCCCAAAAATTCTGGTATTTACAAAA 57.228 29.630 5.94 0.00 31.45 2.44
84 85 9.771534 TCCCAAAAATTCTGGTATTTACAAAAG 57.228 29.630 5.94 0.00 31.45 2.27
85 86 8.998377 CCCAAAAATTCTGGTATTTACAAAAGG 58.002 33.333 5.94 0.00 31.45 3.11
86 87 9.554395 CCAAAAATTCTGGTATTTACAAAAGGT 57.446 29.630 0.00 0.00 0.00 3.50
89 90 8.601845 AAATTCTGGTATTTACAAAAGGTTGC 57.398 30.769 0.00 0.00 38.39 4.17
90 91 6.716934 TTCTGGTATTTACAAAAGGTTGCA 57.283 33.333 0.00 0.00 38.39 4.08
91 92 6.079424 TCTGGTATTTACAAAAGGTTGCAC 57.921 37.500 0.00 0.00 38.39 4.57
92 93 4.861210 TGGTATTTACAAAAGGTTGCACG 58.139 39.130 0.00 0.00 38.39 5.34
93 94 3.671459 GGTATTTACAAAAGGTTGCACGC 59.329 43.478 0.00 0.00 38.39 5.34
94 95 2.211353 TTTACAAAAGGTTGCACGCC 57.789 45.000 0.00 0.00 38.39 5.68
95 96 0.029567 TTACAAAAGGTTGCACGCCG 59.970 50.000 0.00 0.00 38.39 6.46
96 97 1.096386 TACAAAAGGTTGCACGCCGT 61.096 50.000 0.00 0.00 38.39 5.68
97 98 1.943693 CAAAAGGTTGCACGCCGTG 60.944 57.895 13.95 13.95 36.51 4.94
109 110 3.165498 GCCGTGCGTCGAGAAAAT 58.835 55.556 0.00 0.00 42.86 1.82
110 111 1.058903 GCCGTGCGTCGAGAAAATC 59.941 57.895 0.00 0.00 42.86 2.17
111 112 1.352156 GCCGTGCGTCGAGAAAATCT 61.352 55.000 0.00 0.00 42.86 2.40
112 113 0.366871 CCGTGCGTCGAGAAAATCTG 59.633 55.000 0.00 0.00 42.86 2.90
113 114 0.246912 CGTGCGTCGAGAAAATCTGC 60.247 55.000 0.00 0.00 42.86 4.26
114 115 0.095417 GTGCGTCGAGAAAATCTGCC 59.905 55.000 0.00 0.00 0.00 4.85
115 116 0.320334 TGCGTCGAGAAAATCTGCCA 60.320 50.000 0.00 0.00 0.00 4.92
116 117 1.009829 GCGTCGAGAAAATCTGCCAT 58.990 50.000 0.00 0.00 0.00 4.40
117 118 1.398390 GCGTCGAGAAAATCTGCCATT 59.602 47.619 0.00 0.00 0.00 3.16
118 119 2.159517 GCGTCGAGAAAATCTGCCATTT 60.160 45.455 0.00 0.00 0.00 2.32
119 120 3.670627 GCGTCGAGAAAATCTGCCATTTT 60.671 43.478 0.00 3.69 34.30 1.82
120 121 4.475944 CGTCGAGAAAATCTGCCATTTTT 58.524 39.130 5.25 0.00 32.03 1.94
121 122 5.627172 CGTCGAGAAAATCTGCCATTTTTA 58.373 37.500 5.25 0.00 32.03 1.52
122 123 5.734498 CGTCGAGAAAATCTGCCATTTTTAG 59.266 40.000 5.25 2.00 32.03 1.85
123 124 6.030228 GTCGAGAAAATCTGCCATTTTTAGG 58.970 40.000 5.25 0.00 32.03 2.69
124 125 5.943416 TCGAGAAAATCTGCCATTTTTAGGA 59.057 36.000 5.25 1.90 32.03 2.94
125 126 6.603201 TCGAGAAAATCTGCCATTTTTAGGAT 59.397 34.615 5.25 0.00 32.03 3.24
126 127 6.694411 CGAGAAAATCTGCCATTTTTAGGATG 59.306 38.462 5.25 0.00 32.03 3.51
127 128 6.881570 AGAAAATCTGCCATTTTTAGGATGG 58.118 36.000 5.25 0.00 45.52 3.51
143 144 2.568090 GGCACATGTGAAAGCCGG 59.432 61.111 29.80 0.00 37.41 6.13
144 145 2.568090 GCACATGTGAAAGCCGGG 59.432 61.111 29.80 0.00 0.00 5.73
145 146 2.993471 GCACATGTGAAAGCCGGGG 61.993 63.158 29.80 0.00 0.00 5.73
146 147 2.676471 ACATGTGAAAGCCGGGGC 60.676 61.111 2.18 0.18 42.33 5.80
159 160 4.660938 GGGGCGTGCACCTCCTTT 62.661 66.667 18.75 0.00 36.36 3.11
160 161 2.597510 GGGCGTGCACCTCCTTTT 60.598 61.111 18.75 0.00 0.00 2.27
161 162 1.302993 GGGCGTGCACCTCCTTTTA 60.303 57.895 18.75 0.00 0.00 1.52
162 163 1.305930 GGGCGTGCACCTCCTTTTAG 61.306 60.000 18.75 1.15 0.00 1.85
163 164 0.321298 GGCGTGCACCTCCTTTTAGA 60.321 55.000 12.15 0.00 0.00 2.10
164 165 1.079503 GCGTGCACCTCCTTTTAGAG 58.920 55.000 12.15 0.00 0.00 2.43
165 166 1.079503 CGTGCACCTCCTTTTAGAGC 58.920 55.000 12.15 0.00 32.17 4.09
166 167 1.338200 CGTGCACCTCCTTTTAGAGCT 60.338 52.381 12.15 0.00 32.17 4.09
167 168 2.784347 GTGCACCTCCTTTTAGAGCTT 58.216 47.619 5.22 0.00 32.17 3.74
168 169 2.485814 GTGCACCTCCTTTTAGAGCTTG 59.514 50.000 5.22 0.00 32.17 4.01
169 170 2.371841 TGCACCTCCTTTTAGAGCTTGA 59.628 45.455 0.00 0.00 32.17 3.02
170 171 3.181445 TGCACCTCCTTTTAGAGCTTGAA 60.181 43.478 0.00 0.00 32.17 2.69
171 172 3.821033 GCACCTCCTTTTAGAGCTTGAAA 59.179 43.478 0.00 0.00 32.17 2.69
172 173 4.460731 GCACCTCCTTTTAGAGCTTGAAAT 59.539 41.667 0.00 0.00 32.17 2.17
173 174 5.047731 GCACCTCCTTTTAGAGCTTGAAATT 60.048 40.000 0.00 0.00 32.17 1.82
174 175 6.385033 CACCTCCTTTTAGAGCTTGAAATTG 58.615 40.000 0.00 0.00 32.17 2.32
175 176 5.478332 ACCTCCTTTTAGAGCTTGAAATTGG 59.522 40.000 0.00 0.00 32.17 3.16
176 177 5.711976 CCTCCTTTTAGAGCTTGAAATTGGA 59.288 40.000 0.00 2.60 32.17 3.53
177 178 6.127786 CCTCCTTTTAGAGCTTGAAATTGGAG 60.128 42.308 21.45 21.45 36.47 3.86
178 179 5.711976 TCCTTTTAGAGCTTGAAATTGGAGG 59.288 40.000 0.00 0.00 0.00 4.30
179 180 5.105595 CCTTTTAGAGCTTGAAATTGGAGGG 60.106 44.000 0.00 0.00 0.00 4.30
180 181 2.521547 AGAGCTTGAAATTGGAGGGG 57.478 50.000 0.00 0.00 0.00 4.79
181 182 1.995542 AGAGCTTGAAATTGGAGGGGA 59.004 47.619 0.00 0.00 0.00 4.81
182 183 2.584498 AGAGCTTGAAATTGGAGGGGAT 59.416 45.455 0.00 0.00 0.00 3.85
183 184 2.954989 GAGCTTGAAATTGGAGGGGATC 59.045 50.000 0.00 0.00 0.00 3.36
184 185 2.312741 AGCTTGAAATTGGAGGGGATCA 59.687 45.455 0.00 0.00 0.00 2.92
185 186 2.692041 GCTTGAAATTGGAGGGGATCAG 59.308 50.000 0.00 0.00 0.00 2.90
186 187 2.442236 TGAAATTGGAGGGGATCAGC 57.558 50.000 0.00 0.00 0.00 4.26
187 188 1.312815 GAAATTGGAGGGGATCAGCG 58.687 55.000 0.00 0.00 0.00 5.18
188 189 0.918983 AAATTGGAGGGGATCAGCGA 59.081 50.000 0.00 0.00 0.00 4.93
189 190 0.181350 AATTGGAGGGGATCAGCGAC 59.819 55.000 0.00 0.00 0.00 5.19
190 191 2.032860 ATTGGAGGGGATCAGCGACG 62.033 60.000 0.00 0.00 0.00 5.12
191 192 4.593864 GGAGGGGATCAGCGACGC 62.594 72.222 13.03 13.03 0.00 5.19
192 193 4.593864 GAGGGGATCAGCGACGCC 62.594 72.222 17.79 0.00 39.01 5.68
194 195 4.593864 GGGGATCAGCGACGCCTC 62.594 72.222 17.79 10.99 36.42 4.70
195 196 4.593864 GGGATCAGCGACGCCTCC 62.594 72.222 17.79 19.09 0.00 4.30
196 197 4.593864 GGATCAGCGACGCCTCCC 62.594 72.222 17.79 9.24 0.00 4.30
197 198 3.532155 GATCAGCGACGCCTCCCT 61.532 66.667 17.79 0.00 0.00 4.20
198 199 3.492311 GATCAGCGACGCCTCCCTC 62.492 68.421 17.79 3.01 0.00 4.30
203 204 3.213402 CGACGCCTCCCTCCTCTC 61.213 72.222 0.00 0.00 0.00 3.20
204 205 2.835895 GACGCCTCCCTCCTCTCC 60.836 72.222 0.00 0.00 0.00 3.71
205 206 3.663815 GACGCCTCCCTCCTCTCCA 62.664 68.421 0.00 0.00 0.00 3.86
206 207 3.151022 CGCCTCCCTCCTCTCCAC 61.151 72.222 0.00 0.00 0.00 4.02
207 208 2.766229 GCCTCCCTCCTCTCCACC 60.766 72.222 0.00 0.00 0.00 4.61
208 209 2.041405 CCTCCCTCCTCTCCACCC 60.041 72.222 0.00 0.00 0.00 4.61
209 210 2.780693 CTCCCTCCTCTCCACCCA 59.219 66.667 0.00 0.00 0.00 4.51
210 211 1.687493 CTCCCTCCTCTCCACCCAC 60.687 68.421 0.00 0.00 0.00 4.61
211 212 2.689034 CCCTCCTCTCCACCCACC 60.689 72.222 0.00 0.00 0.00 4.61
212 213 2.452114 CCTCCTCTCCACCCACCT 59.548 66.667 0.00 0.00 0.00 4.00
213 214 1.704082 CCTCCTCTCCACCCACCTA 59.296 63.158 0.00 0.00 0.00 3.08
214 215 0.266152 CCTCCTCTCCACCCACCTAT 59.734 60.000 0.00 0.00 0.00 2.57
215 216 1.710816 CTCCTCTCCACCCACCTATC 58.289 60.000 0.00 0.00 0.00 2.08
216 217 0.106167 TCCTCTCCACCCACCTATCG 60.106 60.000 0.00 0.00 0.00 2.92
217 218 0.106167 CCTCTCCACCCACCTATCGA 60.106 60.000 0.00 0.00 0.00 3.59
218 219 1.688311 CCTCTCCACCCACCTATCGAA 60.688 57.143 0.00 0.00 0.00 3.71
219 220 2.320781 CTCTCCACCCACCTATCGAAT 58.679 52.381 0.00 0.00 0.00 3.34
220 221 2.700897 CTCTCCACCCACCTATCGAATT 59.299 50.000 0.00 0.00 0.00 2.17
221 222 2.698797 TCTCCACCCACCTATCGAATTC 59.301 50.000 0.00 0.00 0.00 2.17
222 223 2.700897 CTCCACCCACCTATCGAATTCT 59.299 50.000 3.52 0.00 0.00 2.40
223 224 2.698797 TCCACCCACCTATCGAATTCTC 59.301 50.000 3.52 0.00 0.00 2.87
224 225 2.545952 CCACCCACCTATCGAATTCTCG 60.546 54.545 3.52 0.00 46.87 4.04
239 240 6.428385 GAATTCTCGATGGTCAAACAGATT 57.572 37.500 0.00 0.00 0.00 2.40
240 241 5.808042 ATTCTCGATGGTCAAACAGATTG 57.192 39.130 0.00 0.00 40.58 2.67
241 242 4.535526 TCTCGATGGTCAAACAGATTGA 57.464 40.909 0.00 0.00 45.71 2.57
248 249 1.538047 TCAAACAGATTGAGCCAGCC 58.462 50.000 0.00 0.00 43.08 4.85
249 250 1.202915 TCAAACAGATTGAGCCAGCCA 60.203 47.619 0.00 0.00 43.08 4.75
250 251 1.822990 CAAACAGATTGAGCCAGCCAT 59.177 47.619 0.00 0.00 41.85 4.40
251 252 2.226962 AACAGATTGAGCCAGCCATT 57.773 45.000 0.00 0.00 0.00 3.16
252 253 2.226962 ACAGATTGAGCCAGCCATTT 57.773 45.000 0.00 0.00 0.00 2.32
253 254 2.097825 ACAGATTGAGCCAGCCATTTC 58.902 47.619 0.00 0.00 0.00 2.17
254 255 1.407979 CAGATTGAGCCAGCCATTTCC 59.592 52.381 0.00 0.00 0.00 3.13
255 256 1.006281 AGATTGAGCCAGCCATTTCCA 59.994 47.619 0.00 0.00 0.00 3.53
256 257 1.826720 GATTGAGCCAGCCATTTCCAA 59.173 47.619 0.00 0.00 0.00 3.53
257 258 1.714541 TTGAGCCAGCCATTTCCAAA 58.285 45.000 0.00 0.00 0.00 3.28
258 259 1.714541 TGAGCCAGCCATTTCCAAAA 58.285 45.000 0.00 0.00 0.00 2.44
259 260 2.259012 TGAGCCAGCCATTTCCAAAAT 58.741 42.857 0.00 0.00 0.00 1.82
260 261 2.234414 TGAGCCAGCCATTTCCAAAATC 59.766 45.455 0.00 0.00 0.00 2.17
261 262 1.205417 AGCCAGCCATTTCCAAAATCG 59.795 47.619 0.00 0.00 0.00 3.34
262 263 1.204467 GCCAGCCATTTCCAAAATCGA 59.796 47.619 0.00 0.00 0.00 3.59
263 264 2.353605 GCCAGCCATTTCCAAAATCGAA 60.354 45.455 0.00 0.00 0.00 3.71
264 265 3.253230 CCAGCCATTTCCAAAATCGAAC 58.747 45.455 0.00 0.00 0.00 3.95
265 266 3.305950 CCAGCCATTTCCAAAATCGAACA 60.306 43.478 0.00 0.00 0.00 3.18
266 267 4.305769 CAGCCATTTCCAAAATCGAACAA 58.694 39.130 0.00 0.00 0.00 2.83
267 268 4.150451 CAGCCATTTCCAAAATCGAACAAC 59.850 41.667 0.00 0.00 0.00 3.32
268 269 4.054671 GCCATTTCCAAAATCGAACAACA 58.945 39.130 0.00 0.00 0.00 3.33
269 270 4.509600 GCCATTTCCAAAATCGAACAACAA 59.490 37.500 0.00 0.00 0.00 2.83
270 271 5.007136 GCCATTTCCAAAATCGAACAACAAA 59.993 36.000 0.00 0.00 0.00 2.83
271 272 6.418141 CCATTTCCAAAATCGAACAACAAAC 58.582 36.000 0.00 0.00 0.00 2.93
272 273 6.036517 CCATTTCCAAAATCGAACAACAAACA 59.963 34.615 0.00 0.00 0.00 2.83
273 274 6.396459 TTTCCAAAATCGAACAACAAACAC 57.604 33.333 0.00 0.00 0.00 3.32
274 275 5.060662 TCCAAAATCGAACAACAAACACA 57.939 34.783 0.00 0.00 0.00 3.72
275 276 4.859798 TCCAAAATCGAACAACAAACACAC 59.140 37.500 0.00 0.00 0.00 3.82
276 277 4.623167 CCAAAATCGAACAACAAACACACA 59.377 37.500 0.00 0.00 0.00 3.72
277 278 5.290643 CCAAAATCGAACAACAAACACACAT 59.709 36.000 0.00 0.00 0.00 3.21
278 279 6.473778 CCAAAATCGAACAACAAACACACATA 59.526 34.615 0.00 0.00 0.00 2.29
279 280 7.009631 CCAAAATCGAACAACAAACACACATAA 59.990 33.333 0.00 0.00 0.00 1.90
280 281 7.678194 AAATCGAACAACAAACACACATAAG 57.322 32.000 0.00 0.00 0.00 1.73
281 282 4.593157 TCGAACAACAAACACACATAAGC 58.407 39.130 0.00 0.00 0.00 3.09
282 283 4.095036 TCGAACAACAAACACACATAAGCA 59.905 37.500 0.00 0.00 0.00 3.91
283 284 4.795795 CGAACAACAAACACACATAAGCAA 59.204 37.500 0.00 0.00 0.00 3.91
284 285 5.458452 CGAACAACAAACACACATAAGCAAT 59.542 36.000 0.00 0.00 0.00 3.56
285 286 6.344936 CGAACAACAAACACACATAAGCAATC 60.345 38.462 0.00 0.00 0.00 2.67
286 287 6.147864 ACAACAAACACACATAAGCAATCT 57.852 33.333 0.00 0.00 0.00 2.40
287 288 6.208644 ACAACAAACACACATAAGCAATCTC 58.791 36.000 0.00 0.00 0.00 2.75
288 289 5.034554 ACAAACACACATAAGCAATCTCG 57.965 39.130 0.00 0.00 0.00 4.04
289 290 4.083324 ACAAACACACATAAGCAATCTCGG 60.083 41.667 0.00 0.00 0.00 4.63
290 291 3.334583 ACACACATAAGCAATCTCGGT 57.665 42.857 0.00 0.00 0.00 4.69
291 292 3.674997 ACACACATAAGCAATCTCGGTT 58.325 40.909 0.00 0.00 0.00 4.44
292 293 3.684788 ACACACATAAGCAATCTCGGTTC 59.315 43.478 0.00 0.00 0.00 3.62
293 294 3.684305 CACACATAAGCAATCTCGGTTCA 59.316 43.478 0.00 0.00 0.00 3.18
294 295 3.684788 ACACATAAGCAATCTCGGTTCAC 59.315 43.478 0.00 0.00 0.00 3.18
295 296 2.930040 ACATAAGCAATCTCGGTTCACG 59.070 45.455 0.00 0.00 46.11 4.35
311 312 6.597262 GGTTCACGAATTTCAAAATTGGTT 57.403 33.333 11.62 0.00 42.23 3.67
312 313 6.418141 GGTTCACGAATTTCAAAATTGGTTG 58.582 36.000 11.62 8.70 42.23 3.77
313 314 6.256757 GGTTCACGAATTTCAAAATTGGTTGA 59.743 34.615 11.62 10.26 42.23 3.18
314 315 7.201565 GGTTCACGAATTTCAAAATTGGTTGAA 60.202 33.333 11.62 13.93 42.23 2.69
315 316 8.334632 GTTCACGAATTTCAAAATTGGTTGAAT 58.665 29.630 18.67 0.00 44.71 2.57
316 317 7.849496 TCACGAATTTCAAAATTGGTTGAATG 58.151 30.769 11.62 2.78 44.71 2.67
317 318 6.574462 CACGAATTTCAAAATTGGTTGAATGC 59.426 34.615 11.62 0.40 44.71 3.56
318 319 5.784625 CGAATTTCAAAATTGGTTGAATGCG 59.215 36.000 5.48 6.88 44.71 4.73
319 320 5.610235 ATTTCAAAATTGGTTGAATGCGG 57.390 34.783 6.22 0.00 44.71 5.69
320 321 3.742433 TCAAAATTGGTTGAATGCGGT 57.258 38.095 0.00 0.00 34.59 5.68
321 322 3.388308 TCAAAATTGGTTGAATGCGGTG 58.612 40.909 0.00 0.00 34.59 4.94
322 323 3.129871 CAAAATTGGTTGAATGCGGTGT 58.870 40.909 0.00 0.00 0.00 4.16
323 324 2.723124 AATTGGTTGAATGCGGTGTC 57.277 45.000 0.00 0.00 0.00 3.67
324 325 0.521291 ATTGGTTGAATGCGGTGTCG 59.479 50.000 0.00 0.00 39.81 4.35
325 326 0.533085 TTGGTTGAATGCGGTGTCGA 60.533 50.000 0.00 0.00 39.00 4.20
326 327 0.321210 TGGTTGAATGCGGTGTCGAT 60.321 50.000 0.00 0.00 39.00 3.59
327 328 0.373716 GGTTGAATGCGGTGTCGATC 59.626 55.000 0.00 0.00 39.00 3.69
328 329 0.025001 GTTGAATGCGGTGTCGATCG 59.975 55.000 9.36 9.36 39.00 3.69
329 330 0.109039 TTGAATGCGGTGTCGATCGA 60.109 50.000 15.15 15.15 39.00 3.59
330 331 0.102300 TGAATGCGGTGTCGATCGAT 59.898 50.000 22.50 0.00 39.00 3.59
331 332 0.504384 GAATGCGGTGTCGATCGATG 59.496 55.000 22.50 12.53 39.00 3.84
332 333 0.102300 AATGCGGTGTCGATCGATGA 59.898 50.000 22.50 8.44 39.00 2.92
333 334 0.595053 ATGCGGTGTCGATCGATGAC 60.595 55.000 22.50 19.50 39.00 3.06
334 335 1.944676 GCGGTGTCGATCGATGACC 60.945 63.158 27.44 27.44 39.00 4.02
335 336 1.728069 CGGTGTCGATCGATGACCT 59.272 57.895 30.90 0.00 39.00 3.85
336 337 0.317103 CGGTGTCGATCGATGACCTC 60.317 60.000 30.90 17.08 39.00 3.85
337 338 3.874882 CGGTGTCGATCGATGACCTCG 62.875 61.905 30.90 21.45 43.17 4.63
344 345 4.079090 CGATGACCTCGTGCTCAC 57.921 61.111 0.00 0.00 42.56 3.51
359 360 2.361189 TCACGCATGAGGTCCTTGA 58.639 52.632 0.00 0.00 0.00 3.02
360 361 0.247460 TCACGCATGAGGTCCTTGAG 59.753 55.000 0.00 0.00 0.00 3.02
361 362 1.078848 ACGCATGAGGTCCTTGAGC 60.079 57.895 0.00 0.00 0.00 4.26
362 363 1.220206 CGCATGAGGTCCTTGAGCT 59.780 57.895 0.00 0.00 43.43 4.09
363 364 0.392193 CGCATGAGGTCCTTGAGCTT 60.392 55.000 0.00 0.00 40.67 3.74
364 365 1.377536 GCATGAGGTCCTTGAGCTTC 58.622 55.000 0.00 0.00 40.67 3.86
365 366 1.065564 GCATGAGGTCCTTGAGCTTCT 60.066 52.381 0.00 0.00 40.67 2.85
366 367 2.617532 GCATGAGGTCCTTGAGCTTCTT 60.618 50.000 0.00 0.00 40.67 2.52
367 368 3.269178 CATGAGGTCCTTGAGCTTCTTC 58.731 50.000 0.00 0.00 40.67 2.87
368 369 1.625818 TGAGGTCCTTGAGCTTCTTCC 59.374 52.381 0.00 0.00 40.67 3.46
369 370 1.625818 GAGGTCCTTGAGCTTCTTCCA 59.374 52.381 0.00 0.00 40.67 3.53
370 371 2.039084 GAGGTCCTTGAGCTTCTTCCAA 59.961 50.000 0.00 0.00 40.67 3.53
371 372 2.443255 AGGTCCTTGAGCTTCTTCCAAA 59.557 45.455 0.00 0.00 37.04 3.28
372 373 2.816672 GGTCCTTGAGCTTCTTCCAAAG 59.183 50.000 0.00 0.00 0.00 2.77
373 374 2.816672 GTCCTTGAGCTTCTTCCAAAGG 59.183 50.000 0.00 0.00 0.00 3.11
374 375 2.165998 CCTTGAGCTTCTTCCAAAGGG 58.834 52.381 0.00 0.00 0.00 3.95
375 376 1.543358 CTTGAGCTTCTTCCAAAGGGC 59.457 52.381 0.00 0.00 0.00 5.19
376 377 0.606401 TGAGCTTCTTCCAAAGGGCG 60.606 55.000 0.00 0.00 34.57 6.13
377 378 1.303643 AGCTTCTTCCAAAGGGCGG 60.304 57.895 0.00 0.00 34.57 6.13
378 379 2.994671 GCTTCTTCCAAAGGGCGGC 61.995 63.158 0.00 0.00 0.00 6.53
379 380 2.671619 TTCTTCCAAAGGGCGGCG 60.672 61.111 0.51 0.51 0.00 6.46
380 381 3.485346 TTCTTCCAAAGGGCGGCGT 62.485 57.895 9.37 0.00 0.00 5.68
381 382 2.969300 TTCTTCCAAAGGGCGGCGTT 62.969 55.000 11.48 11.48 0.00 4.84
382 383 3.267597 CTTCCAAAGGGCGGCGTTG 62.268 63.158 18.03 16.14 0.00 4.10
383 384 3.776347 TTCCAAAGGGCGGCGTTGA 62.776 57.895 18.03 8.89 0.00 3.18
384 385 3.291383 CCAAAGGGCGGCGTTGAA 61.291 61.111 18.03 0.00 0.00 2.69
385 386 2.255252 CAAAGGGCGGCGTTGAAG 59.745 61.111 18.03 7.44 0.00 3.02
386 387 2.983592 AAAGGGCGGCGTTGAAGG 60.984 61.111 18.03 0.00 0.00 3.46
387 388 3.485346 AAAGGGCGGCGTTGAAGGA 62.485 57.895 18.03 0.00 0.00 3.36
388 389 2.969300 AAAGGGCGGCGTTGAAGGAA 62.969 55.000 18.03 0.00 0.00 3.36
389 390 3.431725 GGGCGGCGTTGAAGGAAG 61.432 66.667 9.37 0.00 0.00 3.46
390 391 2.668550 GGCGGCGTTGAAGGAAGT 60.669 61.111 9.37 0.00 0.00 3.01
391 392 2.556287 GCGGCGTTGAAGGAAGTG 59.444 61.111 9.37 0.00 0.00 3.16
392 393 2.556287 CGGCGTTGAAGGAAGTGC 59.444 61.111 0.00 0.00 0.00 4.40
393 394 2.556287 GGCGTTGAAGGAAGTGCG 59.444 61.111 0.00 0.00 0.00 5.34
394 395 2.556287 GCGTTGAAGGAAGTGCGG 59.444 61.111 0.00 0.00 0.00 5.69
395 396 2.966309 GCGTTGAAGGAAGTGCGGG 61.966 63.158 0.00 0.00 0.00 6.13
396 397 1.597027 CGTTGAAGGAAGTGCGGGT 60.597 57.895 0.00 0.00 0.00 5.28
397 398 1.841663 CGTTGAAGGAAGTGCGGGTG 61.842 60.000 0.00 0.00 0.00 4.61
398 399 1.896660 TTGAAGGAAGTGCGGGTGC 60.897 57.895 0.00 0.00 43.20 5.01
411 412 4.980805 GGTGCGGTCAAGCGTGGA 62.981 66.667 0.00 0.00 40.67 4.02
412 413 3.712881 GTGCGGTCAAGCGTGGAC 61.713 66.667 0.00 0.00 40.67 4.02
430 431 3.896133 GCGCCCACCATGCTGATG 61.896 66.667 0.00 0.00 0.00 3.07
431 432 3.896133 CGCCCACCATGCTGATGC 61.896 66.667 0.00 0.00 40.20 3.91
440 441 2.670459 TGCTGATGCACCCGATGT 59.330 55.556 0.00 0.00 45.31 3.06
441 442 1.746239 TGCTGATGCACCCGATGTG 60.746 57.895 0.00 1.19 45.31 3.21
442 443 2.475466 GCTGATGCACCCGATGTGG 61.475 63.158 0.00 0.00 45.55 4.17
446 447 2.350895 TGCACCCGATGTGGAAGG 59.649 61.111 7.09 0.00 42.92 3.46
447 448 3.134127 GCACCCGATGTGGAAGGC 61.134 66.667 7.09 0.00 45.55 4.35
448 449 2.819595 CACCCGATGTGGAAGGCG 60.820 66.667 0.00 0.00 41.52 5.52
449 450 4.096003 ACCCGATGTGGAAGGCGG 62.096 66.667 0.00 0.00 42.00 6.13
450 451 3.781307 CCCGATGTGGAAGGCGGA 61.781 66.667 0.00 0.00 46.29 5.54
451 452 2.511600 CCGATGTGGAAGGCGGAC 60.512 66.667 0.00 0.00 46.29 4.79
452 453 2.511600 CGATGTGGAAGGCGGACC 60.512 66.667 0.00 0.00 0.00 4.46
453 454 2.511600 GATGTGGAAGGCGGACCG 60.512 66.667 10.29 10.29 42.76 4.79
454 455 3.000819 ATGTGGAAGGCGGACCGA 61.001 61.111 20.50 0.00 42.76 4.69
455 456 3.310860 ATGTGGAAGGCGGACCGAC 62.311 63.158 20.50 17.10 42.76 4.79
464 465 4.493747 CGGACCGACGCTTCTCCC 62.494 72.222 8.64 0.00 0.00 4.30
465 466 4.144703 GGACCGACGCTTCTCCCC 62.145 72.222 0.00 0.00 0.00 4.81
466 467 4.493747 GACCGACGCTTCTCCCCG 62.494 72.222 0.00 0.00 0.00 5.73
484 485 4.939368 CCCACCGCCGTTGTTGGA 62.939 66.667 0.00 0.00 0.00 3.53
485 486 3.656045 CCACCGCCGTTGTTGGAC 61.656 66.667 0.00 0.00 0.00 4.02
486 487 4.007940 CACCGCCGTTGTTGGACG 62.008 66.667 0.00 0.00 42.43 4.79
487 488 4.224274 ACCGCCGTTGTTGGACGA 62.224 61.111 0.00 0.00 45.47 4.20
488 489 3.708734 CCGCCGTTGTTGGACGAC 61.709 66.667 0.00 0.00 45.47 4.34
489 490 2.660552 CGCCGTTGTTGGACGACT 60.661 61.111 0.00 0.00 45.47 4.18
490 491 2.241880 CGCCGTTGTTGGACGACTT 61.242 57.895 0.00 0.00 45.47 3.01
491 492 1.278637 GCCGTTGTTGGACGACTTG 59.721 57.895 0.00 0.00 45.47 3.16
492 493 1.433837 GCCGTTGTTGGACGACTTGT 61.434 55.000 0.00 0.00 45.47 3.16
493 494 1.855513 CCGTTGTTGGACGACTTGTA 58.144 50.000 0.00 0.00 45.47 2.41
494 495 1.523934 CCGTTGTTGGACGACTTGTAC 59.476 52.381 0.00 0.00 45.47 2.90
495 496 2.195096 CGTTGTTGGACGACTTGTACA 58.805 47.619 0.00 0.00 45.47 2.90
502 503 2.944349 TGGACGACTTGTACAAAAACCC 59.056 45.455 10.03 8.00 38.93 4.11
503 504 2.944349 GGACGACTTGTACAAAAACCCA 59.056 45.455 10.03 0.00 0.00 4.51
504 505 3.002965 GGACGACTTGTACAAAAACCCAG 59.997 47.826 10.03 0.00 0.00 4.45
505 506 2.946990 ACGACTTGTACAAAAACCCAGG 59.053 45.455 10.03 0.00 0.00 4.45
506 507 2.287368 CGACTTGTACAAAAACCCAGGC 60.287 50.000 10.03 0.00 0.00 4.85
507 508 2.956333 GACTTGTACAAAAACCCAGGCT 59.044 45.455 10.03 0.00 0.00 4.58
508 509 2.693074 ACTTGTACAAAAACCCAGGCTG 59.307 45.455 10.03 7.75 0.00 4.85
509 510 1.036707 TGTACAAAAACCCAGGCTGC 58.963 50.000 9.56 0.00 0.00 5.25
510 511 0.039527 GTACAAAAACCCAGGCTGCG 60.040 55.000 9.56 2.56 0.00 5.18
511 512 1.801309 TACAAAAACCCAGGCTGCGC 61.801 55.000 9.56 0.00 0.00 6.09
512 513 3.977244 AAAAACCCAGGCTGCGCG 61.977 61.111 9.56 0.00 0.00 6.86
523 524 4.748679 CTGCGCGGCACAAAGCTC 62.749 66.667 8.83 0.00 44.79 4.09
526 527 4.389576 CGCGGCACAAAGCTCCAC 62.390 66.667 0.00 0.00 44.79 4.02
527 528 4.389576 GCGGCACAAAGCTCCACG 62.390 66.667 0.00 0.00 44.79 4.94
528 529 4.389576 CGGCACAAAGCTCCACGC 62.390 66.667 0.00 0.00 44.79 5.34
529 530 4.389576 GGCACAAAGCTCCACGCG 62.390 66.667 3.53 3.53 45.59 6.01
530 531 4.389576 GCACAAAGCTCCACGCGG 62.390 66.667 12.47 0.00 45.59 6.46
531 532 3.726517 CACAAAGCTCCACGCGGG 61.727 66.667 12.47 6.05 45.59 6.13
532 533 4.250305 ACAAAGCTCCACGCGGGT 62.250 61.111 12.47 0.00 45.59 5.28
533 534 3.726517 CAAAGCTCCACGCGGGTG 61.727 66.667 24.48 24.48 45.59 4.61
555 556 2.026449 CAGAACATGCTCCTTTCCTCCT 60.026 50.000 0.00 0.00 0.00 3.69
567 568 0.413832 TTCCTCCTGCTACCTCCAGT 59.586 55.000 0.00 0.00 0.00 4.00
717 718 1.946768 TGGCTATAATCCAGTTTGCGC 59.053 47.619 0.00 0.00 0.00 6.09
718 719 1.266989 GGCTATAATCCAGTTTGCGCC 59.733 52.381 4.18 0.00 0.00 6.53
719 720 2.222027 GCTATAATCCAGTTTGCGCCT 58.778 47.619 4.18 0.00 0.00 5.52
728 729 3.938963 TCCAGTTTGCGCCTAATAGAAAG 59.061 43.478 4.18 0.00 0.00 2.62
778 786 2.167219 ATGTGCGGAGATTCGTGCG 61.167 57.895 0.00 0.00 0.00 5.34
830 840 0.931005 CGCAGGATAAGTTCGAAGCC 59.069 55.000 0.00 0.00 0.00 4.35
950 967 1.773391 CCAGCTCCCCATCCATCCT 60.773 63.158 0.00 0.00 0.00 3.24
1313 1336 2.270205 CACCTTCGAGCAGGCCAT 59.730 61.111 5.01 0.00 37.47 4.40
1656 1688 0.863538 CGATGAGACGAAGCTGGTCG 60.864 60.000 6.27 6.27 46.54 4.79
1910 1942 1.200948 GAAGGAGTTGTTGAGCATGGC 59.799 52.381 0.00 0.00 0.00 4.40
1916 1948 2.431782 AGTTGTTGAGCATGGCTTGTTT 59.568 40.909 2.12 0.00 39.88 2.83
1946 1978 2.872370 GCAACTTCAGTGATCATTGCC 58.128 47.619 18.79 0.00 37.14 4.52
1996 2028 2.438021 AGTGAGTGTTTTGGGTCAGCTA 59.562 45.455 0.00 0.00 0.00 3.32
1997 2029 2.548480 GTGAGTGTTTTGGGTCAGCTAC 59.452 50.000 0.00 0.00 0.00 3.58
2031 2063 7.043986 CGGTGTGTTGAATTTACGATTTTTCAA 60.044 33.333 0.00 0.00 36.14 2.69
2144 2996 5.319453 TGGCTTGAAAGAGAATCAGATTGT 58.681 37.500 0.00 0.00 37.82 2.71
2199 3052 2.480037 TGTGATCGTGACAAGTCAATGC 59.520 45.455 4.20 0.00 41.85 3.56
2412 3270 7.834681 AGTTCTTTTCCCCTTATTATTCTGGAC 59.165 37.037 0.00 0.00 0.00 4.02
2440 3298 0.250424 TCGGCTGCATATCCATGTGG 60.250 55.000 0.50 0.00 34.40 4.17
2454 3318 1.068055 CATGTGGTCTTTCAAGGCAGC 60.068 52.381 0.00 0.00 30.55 5.25
2512 3376 1.921243 ACAAAAACAAGAACAGCCGC 58.079 45.000 0.00 0.00 0.00 6.53
2756 3625 9.719355 ATTATTGTGGGTTTATGTTTTCCTTTC 57.281 29.630 0.00 0.00 0.00 2.62
2760 3629 4.022676 TGGGTTTATGTTTTCCTTTCGAGC 60.023 41.667 0.00 0.00 0.00 5.03
2763 3632 1.545841 ATGTTTTCCTTTCGAGCCCC 58.454 50.000 0.00 0.00 0.00 5.80
2796 3665 1.892209 TCCCGTTTCTTTGAAGCTCC 58.108 50.000 0.00 0.00 0.00 4.70
2840 3709 3.003763 GGAGACGCCTTCCCAGGT 61.004 66.667 0.00 0.00 43.18 4.00
2978 3941 1.661463 ACCTCTTCTGCCTCCAATCA 58.339 50.000 0.00 0.00 0.00 2.57
2979 3942 1.558756 ACCTCTTCTGCCTCCAATCAG 59.441 52.381 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.510505 GGGAAATTTTTGCAGCATATTGTTTTA 58.489 29.630 0.00 0.00 0.00 1.52
1 2 7.231115 AGGGAAATTTTTGCAGCATATTGTTTT 59.769 29.630 0.00 0.00 0.00 2.43
4 5 5.807909 AGGGAAATTTTTGCAGCATATTGT 58.192 33.333 0.00 0.00 0.00 2.71
5 6 6.746745 AAGGGAAATTTTTGCAGCATATTG 57.253 33.333 0.00 0.00 0.00 1.90
6 7 8.860780 TTAAAGGGAAATTTTTGCAGCATATT 57.139 26.923 0.00 0.00 0.00 1.28
7 8 8.860780 TTTAAAGGGAAATTTTTGCAGCATAT 57.139 26.923 0.00 0.00 0.00 1.78
8 9 7.936301 ACTTTAAAGGGAAATTTTTGCAGCATA 59.064 29.630 19.14 0.00 0.00 3.14
9 10 6.772233 ACTTTAAAGGGAAATTTTTGCAGCAT 59.228 30.769 19.14 0.00 0.00 3.79
10 11 6.118852 ACTTTAAAGGGAAATTTTTGCAGCA 58.881 32.000 19.14 0.00 0.00 4.41
11 12 6.618287 ACTTTAAAGGGAAATTTTTGCAGC 57.382 33.333 19.14 0.00 0.00 5.25
12 13 9.288124 CAAAACTTTAAAGGGAAATTTTTGCAG 57.712 29.630 19.14 2.18 39.72 4.41
13 14 8.246871 CCAAAACTTTAAAGGGAAATTTTTGCA 58.753 29.630 22.04 0.00 42.12 4.08
14 15 7.704472 CCCAAAACTTTAAAGGGAAATTTTTGC 59.296 33.333 22.04 0.00 42.12 3.68
15 16 7.704472 GCCCAAAACTTTAAAGGGAAATTTTTG 59.296 33.333 21.22 21.22 42.58 2.44
16 17 7.617723 AGCCCAAAACTTTAAAGGGAAATTTTT 59.382 29.630 19.14 11.87 42.25 1.94
17 18 7.122715 AGCCCAAAACTTTAAAGGGAAATTTT 58.877 30.769 19.14 12.49 42.25 1.82
18 19 6.668645 AGCCCAAAACTTTAAAGGGAAATTT 58.331 32.000 19.14 7.43 42.25 1.82
19 20 6.260700 AGCCCAAAACTTTAAAGGGAAATT 57.739 33.333 19.14 1.42 42.25 1.82
20 21 5.904984 AGCCCAAAACTTTAAAGGGAAAT 57.095 34.783 19.14 0.00 42.25 2.17
21 22 5.900699 AGTAGCCCAAAACTTTAAAGGGAAA 59.099 36.000 19.14 1.01 42.25 3.13
22 23 5.460416 AGTAGCCCAAAACTTTAAAGGGAA 58.540 37.500 19.14 1.34 42.25 3.97
23 24 5.069518 AGTAGCCCAAAACTTTAAAGGGA 57.930 39.130 19.14 0.00 42.25 4.20
24 25 5.303333 TGAAGTAGCCCAAAACTTTAAAGGG 59.697 40.000 19.14 11.98 42.55 3.95
25 26 6.399639 TGAAGTAGCCCAAAACTTTAAAGG 57.600 37.500 19.14 2.51 36.10 3.11
26 27 6.923508 CCTTGAAGTAGCCCAAAACTTTAAAG 59.076 38.462 13.76 13.76 36.10 1.85
27 28 6.183360 CCCTTGAAGTAGCCCAAAACTTTAAA 60.183 38.462 0.00 0.00 36.10 1.52
28 29 5.303333 CCCTTGAAGTAGCCCAAAACTTTAA 59.697 40.000 0.00 0.00 36.10 1.52
29 30 4.830600 CCCTTGAAGTAGCCCAAAACTTTA 59.169 41.667 0.00 0.00 36.10 1.85
30 31 3.641436 CCCTTGAAGTAGCCCAAAACTTT 59.359 43.478 0.00 0.00 36.10 2.66
31 32 3.230976 CCCTTGAAGTAGCCCAAAACTT 58.769 45.455 0.00 0.00 38.62 2.66
32 33 2.177016 ACCCTTGAAGTAGCCCAAAACT 59.823 45.455 0.00 0.00 0.00 2.66
33 34 2.594131 ACCCTTGAAGTAGCCCAAAAC 58.406 47.619 0.00 0.00 0.00 2.43
34 35 4.146564 GTTACCCTTGAAGTAGCCCAAAA 58.853 43.478 0.00 0.00 0.00 2.44
35 36 3.499021 GGTTACCCTTGAAGTAGCCCAAA 60.499 47.826 0.00 0.00 35.64 3.28
36 37 2.040679 GGTTACCCTTGAAGTAGCCCAA 59.959 50.000 0.00 0.00 35.64 4.12
37 38 1.631898 GGTTACCCTTGAAGTAGCCCA 59.368 52.381 0.00 0.00 35.64 5.36
38 39 1.914108 AGGTTACCCTTGAAGTAGCCC 59.086 52.381 0.00 0.00 40.80 5.19
39 40 2.093075 GGAGGTTACCCTTGAAGTAGCC 60.093 54.545 0.00 0.00 42.86 3.93
40 41 2.093075 GGGAGGTTACCCTTGAAGTAGC 60.093 54.545 0.00 0.00 45.90 3.58
41 42 3.908643 GGGAGGTTACCCTTGAAGTAG 57.091 52.381 0.00 0.00 45.90 2.57
51 52 4.157246 ACCAGAATTTTTGGGAGGTTACC 58.843 43.478 10.45 0.00 40.11 2.85
52 53 7.476540 AATACCAGAATTTTTGGGAGGTTAC 57.523 36.000 10.45 0.00 40.11 2.50
53 54 9.027202 GTAAATACCAGAATTTTTGGGAGGTTA 57.973 33.333 10.45 2.87 40.11 2.85
54 55 7.511028 TGTAAATACCAGAATTTTTGGGAGGTT 59.489 33.333 10.45 3.70 40.11 3.50
55 56 7.013834 TGTAAATACCAGAATTTTTGGGAGGT 58.986 34.615 10.45 0.00 40.11 3.85
56 57 7.475137 TGTAAATACCAGAATTTTTGGGAGG 57.525 36.000 10.45 0.00 40.11 4.30
57 58 9.771534 TTTTGTAAATACCAGAATTTTTGGGAG 57.228 29.630 10.45 0.00 40.11 4.30
58 59 9.771534 CTTTTGTAAATACCAGAATTTTTGGGA 57.228 29.630 10.45 2.08 40.11 4.37
59 60 8.998377 CCTTTTGTAAATACCAGAATTTTTGGG 58.002 33.333 10.45 0.71 40.11 4.12
60 61 9.554395 ACCTTTTGTAAATACCAGAATTTTTGG 57.446 29.630 4.48 4.48 41.60 3.28
63 64 9.051679 GCAACCTTTTGTAAATACCAGAATTTT 57.948 29.630 0.00 0.00 34.90 1.82
64 65 8.207545 TGCAACCTTTTGTAAATACCAGAATTT 58.792 29.630 0.00 0.00 34.90 1.82
65 66 7.655732 GTGCAACCTTTTGTAAATACCAGAATT 59.344 33.333 0.00 0.00 34.90 2.17
66 67 7.151976 GTGCAACCTTTTGTAAATACCAGAAT 58.848 34.615 0.00 0.00 34.90 2.40
67 68 6.508777 GTGCAACCTTTTGTAAATACCAGAA 58.491 36.000 0.00 0.00 34.90 3.02
68 69 5.278071 CGTGCAACCTTTTGTAAATACCAGA 60.278 40.000 0.00 0.00 34.90 3.86
69 70 4.915085 CGTGCAACCTTTTGTAAATACCAG 59.085 41.667 0.00 0.00 34.90 4.00
70 71 4.793353 GCGTGCAACCTTTTGTAAATACCA 60.793 41.667 0.00 0.00 34.90 3.25
71 72 3.671459 GCGTGCAACCTTTTGTAAATACC 59.329 43.478 0.00 0.00 34.90 2.73
72 73 3.671459 GGCGTGCAACCTTTTGTAAATAC 59.329 43.478 0.00 0.00 34.90 1.89
73 74 3.609644 CGGCGTGCAACCTTTTGTAAATA 60.610 43.478 0.00 0.00 34.90 1.40
74 75 2.749776 GGCGTGCAACCTTTTGTAAAT 58.250 42.857 0.00 0.00 34.90 1.40
75 76 1.534175 CGGCGTGCAACCTTTTGTAAA 60.534 47.619 0.00 0.00 34.90 2.01
76 77 0.029567 CGGCGTGCAACCTTTTGTAA 59.970 50.000 0.00 0.00 34.90 2.41
77 78 1.096386 ACGGCGTGCAACCTTTTGTA 61.096 50.000 13.76 0.00 34.90 2.41
78 79 2.411290 CGGCGTGCAACCTTTTGT 59.589 55.556 0.00 0.00 34.90 2.83
79 80 1.943693 CACGGCGTGCAACCTTTTG 60.944 57.895 28.30 0.00 35.62 2.44
80 81 2.411290 CACGGCGTGCAACCTTTT 59.589 55.556 28.30 0.00 0.00 2.27
92 93 1.058903 GATTTTCTCGACGCACGGC 59.941 57.895 3.02 0.00 42.82 5.68
93 94 0.366871 CAGATTTTCTCGACGCACGG 59.633 55.000 3.02 0.00 42.82 4.94
94 95 0.246912 GCAGATTTTCTCGACGCACG 60.247 55.000 0.00 0.00 44.09 5.34
95 96 0.095417 GGCAGATTTTCTCGACGCAC 59.905 55.000 0.00 0.00 0.00 5.34
96 97 0.320334 TGGCAGATTTTCTCGACGCA 60.320 50.000 0.00 0.00 0.00 5.24
97 98 1.009829 ATGGCAGATTTTCTCGACGC 58.990 50.000 0.00 0.00 0.00 5.19
98 99 3.747099 AAATGGCAGATTTTCTCGACG 57.253 42.857 0.00 0.00 0.00 5.12
99 100 6.030228 CCTAAAAATGGCAGATTTTCTCGAC 58.970 40.000 14.68 0.00 31.53 4.20
100 101 5.943416 TCCTAAAAATGGCAGATTTTCTCGA 59.057 36.000 14.68 8.17 31.53 4.04
101 102 6.194796 TCCTAAAAATGGCAGATTTTCTCG 57.805 37.500 14.68 7.29 31.53 4.04
102 103 6.982724 CCATCCTAAAAATGGCAGATTTTCTC 59.017 38.462 14.68 0.00 37.46 2.87
103 104 6.881570 CCATCCTAAAAATGGCAGATTTTCT 58.118 36.000 14.68 3.02 37.46 2.52
113 114 4.160065 TCACATGTGCCATCCTAAAAATGG 59.840 41.667 21.38 0.00 45.45 3.16
114 115 5.327616 TCACATGTGCCATCCTAAAAATG 57.672 39.130 21.38 0.00 0.00 2.32
115 116 5.999205 TTCACATGTGCCATCCTAAAAAT 57.001 34.783 21.38 0.00 0.00 1.82
116 117 5.782047 CTTTCACATGTGCCATCCTAAAAA 58.218 37.500 21.38 11.39 0.00 1.94
117 118 4.321899 GCTTTCACATGTGCCATCCTAAAA 60.322 41.667 21.38 12.06 0.00 1.52
118 119 3.193267 GCTTTCACATGTGCCATCCTAAA 59.807 43.478 21.38 12.73 0.00 1.85
119 120 2.754552 GCTTTCACATGTGCCATCCTAA 59.245 45.455 21.38 5.38 0.00 2.69
120 121 2.368439 GCTTTCACATGTGCCATCCTA 58.632 47.619 21.38 0.00 0.00 2.94
121 122 1.180029 GCTTTCACATGTGCCATCCT 58.820 50.000 21.38 0.00 0.00 3.24
122 123 0.174162 GGCTTTCACATGTGCCATCC 59.826 55.000 21.38 14.63 44.34 3.51
123 124 0.179156 CGGCTTTCACATGTGCCATC 60.179 55.000 21.38 9.75 45.13 3.51
124 125 1.597797 CCGGCTTTCACATGTGCCAT 61.598 55.000 21.38 0.00 45.13 4.40
125 126 2.267351 CCGGCTTTCACATGTGCCA 61.267 57.895 21.38 7.21 45.13 4.92
126 127 2.568090 CCGGCTTTCACATGTGCC 59.432 61.111 21.38 17.10 41.76 5.01
127 128 2.568090 CCCGGCTTTCACATGTGC 59.432 61.111 21.38 9.19 0.00 4.57
128 129 2.993471 GCCCCGGCTTTCACATGTG 61.993 63.158 20.18 20.18 38.26 3.21
129 130 2.676471 GCCCCGGCTTTCACATGT 60.676 61.111 0.00 0.00 38.26 3.21
130 131 3.814268 CGCCCCGGCTTTCACATG 61.814 66.667 3.84 0.00 39.32 3.21
131 132 4.344865 ACGCCCCGGCTTTCACAT 62.345 61.111 3.84 0.00 39.32 3.21
142 143 2.757980 TAAAAGGAGGTGCACGCCCC 62.758 60.000 20.06 15.78 40.38 5.80
143 144 1.302993 TAAAAGGAGGTGCACGCCC 60.303 57.895 20.06 17.98 40.38 6.13
144 145 0.321298 TCTAAAAGGAGGTGCACGCC 60.321 55.000 17.05 17.05 39.70 5.68
145 146 1.079503 CTCTAAAAGGAGGTGCACGC 58.920 55.000 11.45 5.21 0.00 5.34
146 147 1.079503 GCTCTAAAAGGAGGTGCACG 58.920 55.000 11.45 0.00 34.21 5.34
147 148 2.481289 AGCTCTAAAAGGAGGTGCAC 57.519 50.000 8.80 8.80 41.67 4.57
148 149 2.371841 TCAAGCTCTAAAAGGAGGTGCA 59.628 45.455 0.00 0.00 42.29 4.57
149 150 3.059352 TCAAGCTCTAAAAGGAGGTGC 57.941 47.619 0.00 0.00 42.29 5.01
150 151 6.385033 CAATTTCAAGCTCTAAAAGGAGGTG 58.615 40.000 0.00 0.00 42.29 4.00
151 152 5.478332 CCAATTTCAAGCTCTAAAAGGAGGT 59.522 40.000 0.00 0.00 44.56 3.85
152 153 5.711976 TCCAATTTCAAGCTCTAAAAGGAGG 59.288 40.000 11.23 6.23 34.21 4.30
153 154 6.127786 CCTCCAATTTCAAGCTCTAAAAGGAG 60.128 42.308 22.72 22.72 38.91 3.69
154 155 5.711976 CCTCCAATTTCAAGCTCTAAAAGGA 59.288 40.000 13.19 13.19 0.00 3.36
155 156 5.105595 CCCTCCAATTTCAAGCTCTAAAAGG 60.106 44.000 0.00 0.00 0.00 3.11
156 157 5.105595 CCCCTCCAATTTCAAGCTCTAAAAG 60.106 44.000 0.00 0.00 0.00 2.27
157 158 4.772100 CCCCTCCAATTTCAAGCTCTAAAA 59.228 41.667 0.00 0.00 0.00 1.52
158 159 4.044065 TCCCCTCCAATTTCAAGCTCTAAA 59.956 41.667 0.00 0.00 0.00 1.85
159 160 3.591527 TCCCCTCCAATTTCAAGCTCTAA 59.408 43.478 0.00 0.00 0.00 2.10
160 161 3.189606 TCCCCTCCAATTTCAAGCTCTA 58.810 45.455 0.00 0.00 0.00 2.43
161 162 1.995542 TCCCCTCCAATTTCAAGCTCT 59.004 47.619 0.00 0.00 0.00 4.09
162 163 2.514458 TCCCCTCCAATTTCAAGCTC 57.486 50.000 0.00 0.00 0.00 4.09
163 164 2.312741 TGATCCCCTCCAATTTCAAGCT 59.687 45.455 0.00 0.00 0.00 3.74
164 165 2.692041 CTGATCCCCTCCAATTTCAAGC 59.308 50.000 0.00 0.00 0.00 4.01
165 166 2.692041 GCTGATCCCCTCCAATTTCAAG 59.308 50.000 0.00 0.00 0.00 3.02
166 167 2.738743 GCTGATCCCCTCCAATTTCAA 58.261 47.619 0.00 0.00 0.00 2.69
167 168 1.408683 CGCTGATCCCCTCCAATTTCA 60.409 52.381 0.00 0.00 0.00 2.69
168 169 1.134098 TCGCTGATCCCCTCCAATTTC 60.134 52.381 0.00 0.00 0.00 2.17
169 170 0.918983 TCGCTGATCCCCTCCAATTT 59.081 50.000 0.00 0.00 0.00 1.82
170 171 0.181350 GTCGCTGATCCCCTCCAATT 59.819 55.000 0.00 0.00 0.00 2.32
171 172 1.832912 GTCGCTGATCCCCTCCAAT 59.167 57.895 0.00 0.00 0.00 3.16
172 173 2.721167 CGTCGCTGATCCCCTCCAA 61.721 63.158 0.00 0.00 0.00 3.53
173 174 3.147595 CGTCGCTGATCCCCTCCA 61.148 66.667 0.00 0.00 0.00 3.86
174 175 4.593864 GCGTCGCTGATCCCCTCC 62.594 72.222 10.68 0.00 0.00 4.30
175 176 4.593864 GGCGTCGCTGATCCCCTC 62.594 72.222 18.11 0.00 0.00 4.30
177 178 4.593864 GAGGCGTCGCTGATCCCC 62.594 72.222 18.11 0.00 0.00 4.81
178 179 4.593864 GGAGGCGTCGCTGATCCC 62.594 72.222 18.11 7.55 0.00 3.85
179 180 4.593864 GGGAGGCGTCGCTGATCC 62.594 72.222 18.11 19.93 32.83 3.36
180 181 3.492311 GAGGGAGGCGTCGCTGATC 62.492 68.421 27.91 12.19 45.66 2.92
181 182 3.532155 GAGGGAGGCGTCGCTGAT 61.532 66.667 27.91 7.05 45.66 2.90
186 187 3.213402 GAGAGGAGGGAGGCGTCG 61.213 72.222 0.00 0.00 0.00 5.12
187 188 2.835895 GGAGAGGAGGGAGGCGTC 60.836 72.222 0.00 0.00 0.00 5.19
188 189 3.673597 TGGAGAGGAGGGAGGCGT 61.674 66.667 0.00 0.00 0.00 5.68
189 190 3.151022 GTGGAGAGGAGGGAGGCG 61.151 72.222 0.00 0.00 0.00 5.52
190 191 2.766229 GGTGGAGAGGAGGGAGGC 60.766 72.222 0.00 0.00 0.00 4.70
191 192 2.041405 GGGTGGAGAGGAGGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
192 193 1.687493 GTGGGTGGAGAGGAGGGAG 60.687 68.421 0.00 0.00 0.00 4.30
193 194 2.450243 GTGGGTGGAGAGGAGGGA 59.550 66.667 0.00 0.00 0.00 4.20
194 195 1.886730 TAGGTGGGTGGAGAGGAGGG 61.887 65.000 0.00 0.00 0.00 4.30
195 196 0.266152 ATAGGTGGGTGGAGAGGAGG 59.734 60.000 0.00 0.00 0.00 4.30
196 197 1.710816 GATAGGTGGGTGGAGAGGAG 58.289 60.000 0.00 0.00 0.00 3.69
197 198 0.106167 CGATAGGTGGGTGGAGAGGA 60.106 60.000 0.00 0.00 0.00 3.71
198 199 0.106167 TCGATAGGTGGGTGGAGAGG 60.106 60.000 0.00 0.00 0.00 3.69
199 200 1.776662 TTCGATAGGTGGGTGGAGAG 58.223 55.000 0.00 0.00 0.00 3.20
200 201 2.471815 ATTCGATAGGTGGGTGGAGA 57.528 50.000 0.00 0.00 0.00 3.71
201 202 2.700897 AGAATTCGATAGGTGGGTGGAG 59.299 50.000 0.00 0.00 0.00 3.86
202 203 2.698797 GAGAATTCGATAGGTGGGTGGA 59.301 50.000 0.00 0.00 0.00 4.02
203 204 3.113260 GAGAATTCGATAGGTGGGTGG 57.887 52.381 0.00 0.00 0.00 4.61
215 216 6.941304 CAATCTGTTTGACCATCGAGAATTCG 60.941 42.308 0.00 0.00 41.86 3.34
216 217 6.092670 TCAATCTGTTTGACCATCGAGAATTC 59.907 38.462 0.00 0.00 39.44 2.17
217 218 5.939883 TCAATCTGTTTGACCATCGAGAATT 59.060 36.000 0.00 0.00 39.44 2.17
218 219 5.491070 TCAATCTGTTTGACCATCGAGAAT 58.509 37.500 0.00 0.00 39.44 2.40
219 220 4.893608 TCAATCTGTTTGACCATCGAGAA 58.106 39.130 0.00 0.00 39.44 2.87
220 221 4.498241 CTCAATCTGTTTGACCATCGAGA 58.502 43.478 0.00 0.00 39.44 4.04
221 222 3.063180 GCTCAATCTGTTTGACCATCGAG 59.937 47.826 0.00 0.00 39.44 4.04
222 223 3.002791 GCTCAATCTGTTTGACCATCGA 58.997 45.455 0.00 0.00 39.44 3.59
223 224 2.096496 GGCTCAATCTGTTTGACCATCG 59.904 50.000 11.71 0.00 39.44 3.84
224 225 3.084039 TGGCTCAATCTGTTTGACCATC 58.916 45.455 13.77 1.57 39.44 3.51
225 226 3.087031 CTGGCTCAATCTGTTTGACCAT 58.913 45.455 16.16 0.00 41.00 3.55
226 227 2.507484 CTGGCTCAATCTGTTTGACCA 58.493 47.619 15.51 15.51 39.44 4.02
227 228 1.200948 GCTGGCTCAATCTGTTTGACC 59.799 52.381 0.00 5.48 39.44 4.02
228 229 1.200948 GGCTGGCTCAATCTGTTTGAC 59.799 52.381 0.00 0.00 39.44 3.18
229 230 1.202915 TGGCTGGCTCAATCTGTTTGA 60.203 47.619 2.00 1.59 42.09 2.69
230 231 1.250328 TGGCTGGCTCAATCTGTTTG 58.750 50.000 2.00 0.00 36.61 2.93
231 232 2.226962 ATGGCTGGCTCAATCTGTTT 57.773 45.000 2.00 0.00 0.00 2.83
232 233 2.226962 AATGGCTGGCTCAATCTGTT 57.773 45.000 2.00 0.00 0.00 3.16
233 234 2.097825 GAAATGGCTGGCTCAATCTGT 58.902 47.619 2.00 0.00 0.00 3.41
234 235 1.407979 GGAAATGGCTGGCTCAATCTG 59.592 52.381 2.00 0.00 0.00 2.90
235 236 1.006281 TGGAAATGGCTGGCTCAATCT 59.994 47.619 2.00 0.00 0.00 2.40
236 237 1.477553 TGGAAATGGCTGGCTCAATC 58.522 50.000 2.00 0.00 0.00 2.67
237 238 1.941377 TTGGAAATGGCTGGCTCAAT 58.059 45.000 2.00 0.00 0.00 2.57
238 239 1.714541 TTTGGAAATGGCTGGCTCAA 58.285 45.000 2.00 0.00 0.00 3.02
239 240 1.714541 TTTTGGAAATGGCTGGCTCA 58.285 45.000 2.00 0.00 0.00 4.26
240 241 2.736400 CGATTTTGGAAATGGCTGGCTC 60.736 50.000 2.00 0.00 0.00 4.70
241 242 1.205417 CGATTTTGGAAATGGCTGGCT 59.795 47.619 2.00 0.00 0.00 4.75
242 243 1.204467 TCGATTTTGGAAATGGCTGGC 59.796 47.619 0.00 0.00 0.00 4.85
243 244 3.253230 GTTCGATTTTGGAAATGGCTGG 58.747 45.455 0.00 0.00 0.00 4.85
244 245 3.911868 TGTTCGATTTTGGAAATGGCTG 58.088 40.909 0.00 0.00 0.00 4.85
245 246 4.202202 TGTTGTTCGATTTTGGAAATGGCT 60.202 37.500 0.00 0.00 0.00 4.75
246 247 4.054671 TGTTGTTCGATTTTGGAAATGGC 58.945 39.130 0.00 0.00 0.00 4.40
247 248 6.036517 TGTTTGTTGTTCGATTTTGGAAATGG 59.963 34.615 0.00 0.00 0.00 3.16
248 249 6.899243 GTGTTTGTTGTTCGATTTTGGAAATG 59.101 34.615 0.00 0.00 0.00 2.32
249 250 6.591834 TGTGTTTGTTGTTCGATTTTGGAAAT 59.408 30.769 0.00 0.00 0.00 2.17
250 251 5.926542 TGTGTTTGTTGTTCGATTTTGGAAA 59.073 32.000 0.00 0.00 0.00 3.13
251 252 5.346281 GTGTGTTTGTTGTTCGATTTTGGAA 59.654 36.000 0.00 0.00 0.00 3.53
252 253 4.859798 GTGTGTTTGTTGTTCGATTTTGGA 59.140 37.500 0.00 0.00 0.00 3.53
253 254 4.623167 TGTGTGTTTGTTGTTCGATTTTGG 59.377 37.500 0.00 0.00 0.00 3.28
254 255 5.753713 TGTGTGTTTGTTGTTCGATTTTG 57.246 34.783 0.00 0.00 0.00 2.44
255 256 7.253950 GCTTATGTGTGTTTGTTGTTCGATTTT 60.254 33.333 0.00 0.00 0.00 1.82
256 257 6.198216 GCTTATGTGTGTTTGTTGTTCGATTT 59.802 34.615 0.00 0.00 0.00 2.17
257 258 5.685511 GCTTATGTGTGTTTGTTGTTCGATT 59.314 36.000 0.00 0.00 0.00 3.34
258 259 5.212194 GCTTATGTGTGTTTGTTGTTCGAT 58.788 37.500 0.00 0.00 0.00 3.59
259 260 4.095036 TGCTTATGTGTGTTTGTTGTTCGA 59.905 37.500 0.00 0.00 0.00 3.71
260 261 4.346970 TGCTTATGTGTGTTTGTTGTTCG 58.653 39.130 0.00 0.00 0.00 3.95
261 262 6.697019 AGATTGCTTATGTGTGTTTGTTGTTC 59.303 34.615 0.00 0.00 0.00 3.18
262 263 6.572519 AGATTGCTTATGTGTGTTTGTTGTT 58.427 32.000 0.00 0.00 0.00 2.83
263 264 6.147864 AGATTGCTTATGTGTGTTTGTTGT 57.852 33.333 0.00 0.00 0.00 3.32
264 265 5.340403 CGAGATTGCTTATGTGTGTTTGTTG 59.660 40.000 0.00 0.00 0.00 3.33
265 266 5.451908 CGAGATTGCTTATGTGTGTTTGTT 58.548 37.500 0.00 0.00 0.00 2.83
266 267 4.083324 CCGAGATTGCTTATGTGTGTTTGT 60.083 41.667 0.00 0.00 0.00 2.83
267 268 4.083324 ACCGAGATTGCTTATGTGTGTTTG 60.083 41.667 0.00 0.00 0.00 2.93
268 269 4.072131 ACCGAGATTGCTTATGTGTGTTT 58.928 39.130 0.00 0.00 0.00 2.83
269 270 3.674997 ACCGAGATTGCTTATGTGTGTT 58.325 40.909 0.00 0.00 0.00 3.32
270 271 3.334583 ACCGAGATTGCTTATGTGTGT 57.665 42.857 0.00 0.00 0.00 3.72
271 272 3.684305 TGAACCGAGATTGCTTATGTGTG 59.316 43.478 0.00 0.00 0.00 3.82
272 273 3.684788 GTGAACCGAGATTGCTTATGTGT 59.315 43.478 0.00 0.00 0.00 3.72
273 274 3.242091 CGTGAACCGAGATTGCTTATGTG 60.242 47.826 0.00 0.00 39.56 3.21
274 275 2.930040 CGTGAACCGAGATTGCTTATGT 59.070 45.455 0.00 0.00 39.56 2.29
275 276 3.186909 TCGTGAACCGAGATTGCTTATG 58.813 45.455 0.00 0.00 41.60 1.90
276 277 3.520290 TCGTGAACCGAGATTGCTTAT 57.480 42.857 0.00 0.00 41.60 1.73
278 279 3.906660 TCGTGAACCGAGATTGCTT 57.093 47.368 0.00 0.00 41.60 3.91
286 287 4.979197 CCAATTTTGAAATTCGTGAACCGA 59.021 37.500 0.00 0.00 45.66 4.69
287 288 4.742659 ACCAATTTTGAAATTCGTGAACCG 59.257 37.500 0.00 0.00 36.52 4.44
288 289 6.256757 TCAACCAATTTTGAAATTCGTGAACC 59.743 34.615 1.22 0.00 36.52 3.62
289 290 7.227992 TCAACCAATTTTGAAATTCGTGAAC 57.772 32.000 1.22 0.00 36.52 3.18
290 291 7.834068 TTCAACCAATTTTGAAATTCGTGAA 57.166 28.000 3.35 11.13 41.48 3.18
291 292 7.518052 GCATTCAACCAATTTTGAAATTCGTGA 60.518 33.333 8.89 2.58 46.06 4.35
292 293 6.574462 GCATTCAACCAATTTTGAAATTCGTG 59.426 34.615 8.89 4.76 46.06 4.35
293 294 6.563753 CGCATTCAACCAATTTTGAAATTCGT 60.564 34.615 8.89 0.00 46.06 3.85
294 295 5.784625 CGCATTCAACCAATTTTGAAATTCG 59.215 36.000 8.89 8.73 46.06 3.34
295 296 6.079120 CCGCATTCAACCAATTTTGAAATTC 58.921 36.000 8.89 0.00 46.06 2.17
296 297 5.530543 ACCGCATTCAACCAATTTTGAAATT 59.469 32.000 8.89 0.00 46.06 1.82
297 298 5.049543 CACCGCATTCAACCAATTTTGAAAT 60.050 36.000 8.89 0.00 46.06 2.17
298 299 4.272018 CACCGCATTCAACCAATTTTGAAA 59.728 37.500 8.89 0.00 46.06 2.69
299 300 3.806521 CACCGCATTCAACCAATTTTGAA 59.193 39.130 7.56 7.56 46.78 2.69
300 301 3.181471 ACACCGCATTCAACCAATTTTGA 60.181 39.130 0.00 0.00 33.55 2.69
301 302 3.129871 ACACCGCATTCAACCAATTTTG 58.870 40.909 0.00 0.00 0.00 2.44
302 303 3.389221 GACACCGCATTCAACCAATTTT 58.611 40.909 0.00 0.00 0.00 1.82
303 304 2.606795 CGACACCGCATTCAACCAATTT 60.607 45.455 0.00 0.00 0.00 1.82
304 305 1.068610 CGACACCGCATTCAACCAATT 60.069 47.619 0.00 0.00 0.00 2.32
305 306 0.521291 CGACACCGCATTCAACCAAT 59.479 50.000 0.00 0.00 0.00 3.16
306 307 0.533085 TCGACACCGCATTCAACCAA 60.533 50.000 0.00 0.00 35.37 3.67
307 308 0.321210 ATCGACACCGCATTCAACCA 60.321 50.000 0.00 0.00 35.37 3.67
308 309 0.373716 GATCGACACCGCATTCAACC 59.626 55.000 0.00 0.00 35.37 3.77
309 310 0.025001 CGATCGACACCGCATTCAAC 59.975 55.000 10.26 0.00 35.37 3.18
310 311 0.109039 TCGATCGACACCGCATTCAA 60.109 50.000 15.15 0.00 35.37 2.69
311 312 0.102300 ATCGATCGACACCGCATTCA 59.898 50.000 22.06 0.00 35.37 2.57
312 313 0.504384 CATCGATCGACACCGCATTC 59.496 55.000 22.06 0.00 35.37 2.67
313 314 0.102300 TCATCGATCGACACCGCATT 59.898 50.000 22.06 0.00 35.37 3.56
314 315 0.595053 GTCATCGATCGACACCGCAT 60.595 55.000 22.06 0.00 33.43 4.73
315 316 1.226575 GTCATCGATCGACACCGCA 60.227 57.895 22.06 0.00 33.43 5.69
316 317 1.944676 GGTCATCGATCGACACCGC 60.945 63.158 24.92 13.09 34.97 5.68
317 318 0.317103 GAGGTCATCGATCGACACCG 60.317 60.000 29.32 16.87 36.22 4.94
318 319 3.553597 GAGGTCATCGATCGACACC 57.446 57.895 29.01 29.01 34.97 4.16
340 341 1.738365 CTCAAGGACCTCATGCGTGAG 60.738 57.143 26.20 26.20 45.72 3.51
341 342 0.247460 CTCAAGGACCTCATGCGTGA 59.753 55.000 8.64 8.64 34.87 4.35
342 343 1.364626 GCTCAAGGACCTCATGCGTG 61.365 60.000 0.00 0.00 0.00 5.34
343 344 1.078848 GCTCAAGGACCTCATGCGT 60.079 57.895 0.00 0.00 0.00 5.24
344 345 0.392193 AAGCTCAAGGACCTCATGCG 60.392 55.000 0.00 0.00 0.00 4.73
345 346 1.065564 AGAAGCTCAAGGACCTCATGC 60.066 52.381 0.00 0.00 0.00 4.06
346 347 3.269178 GAAGAAGCTCAAGGACCTCATG 58.731 50.000 0.00 0.00 0.00 3.07
347 348 2.238395 GGAAGAAGCTCAAGGACCTCAT 59.762 50.000 0.00 0.00 0.00 2.90
348 349 1.625818 GGAAGAAGCTCAAGGACCTCA 59.374 52.381 0.00 0.00 0.00 3.86
349 350 1.625818 TGGAAGAAGCTCAAGGACCTC 59.374 52.381 0.00 0.00 0.00 3.85
350 351 1.734655 TGGAAGAAGCTCAAGGACCT 58.265 50.000 0.00 0.00 0.00 3.85
351 352 2.568623 TTGGAAGAAGCTCAAGGACC 57.431 50.000 0.00 0.00 0.00 4.46
352 353 2.816672 CCTTTGGAAGAAGCTCAAGGAC 59.183 50.000 0.00 0.00 0.00 3.85
353 354 2.224867 CCCTTTGGAAGAAGCTCAAGGA 60.225 50.000 0.00 0.00 0.00 3.36
354 355 2.165998 CCCTTTGGAAGAAGCTCAAGG 58.834 52.381 0.00 0.00 0.00 3.61
355 356 1.543358 GCCCTTTGGAAGAAGCTCAAG 59.457 52.381 0.00 0.00 0.00 3.02
356 357 1.620822 GCCCTTTGGAAGAAGCTCAA 58.379 50.000 0.00 0.00 0.00 3.02
357 358 0.606401 CGCCCTTTGGAAGAAGCTCA 60.606 55.000 0.00 0.00 0.00 4.26
358 359 1.308783 CCGCCCTTTGGAAGAAGCTC 61.309 60.000 0.00 0.00 0.00 4.09
359 360 1.303643 CCGCCCTTTGGAAGAAGCT 60.304 57.895 0.00 0.00 0.00 3.74
360 361 2.994671 GCCGCCCTTTGGAAGAAGC 61.995 63.158 0.00 0.00 0.00 3.86
361 362 2.690778 CGCCGCCCTTTGGAAGAAG 61.691 63.158 0.00 0.00 0.00 2.85
362 363 2.671619 CGCCGCCCTTTGGAAGAA 60.672 61.111 0.00 0.00 0.00 2.52
363 364 3.485346 AACGCCGCCCTTTGGAAGA 62.485 57.895 0.00 0.00 0.00 2.87
364 365 2.983592 AACGCCGCCCTTTGGAAG 60.984 61.111 0.00 0.00 0.00 3.46
365 366 3.291383 CAACGCCGCCCTTTGGAA 61.291 61.111 0.00 0.00 0.00 3.53
366 367 3.776347 TTCAACGCCGCCCTTTGGA 62.776 57.895 0.00 0.00 0.00 3.53
367 368 3.267597 CTTCAACGCCGCCCTTTGG 62.268 63.158 0.00 0.00 0.00 3.28
368 369 2.255252 CTTCAACGCCGCCCTTTG 59.745 61.111 0.00 0.00 0.00 2.77
369 370 2.969300 TTCCTTCAACGCCGCCCTTT 62.969 55.000 0.00 0.00 0.00 3.11
370 371 3.485346 TTCCTTCAACGCCGCCCTT 62.485 57.895 0.00 0.00 0.00 3.95
371 372 3.901797 CTTCCTTCAACGCCGCCCT 62.902 63.158 0.00 0.00 0.00 5.19
372 373 3.431725 CTTCCTTCAACGCCGCCC 61.432 66.667 0.00 0.00 0.00 6.13
373 374 2.668550 ACTTCCTTCAACGCCGCC 60.669 61.111 0.00 0.00 0.00 6.13
374 375 2.556287 CACTTCCTTCAACGCCGC 59.444 61.111 0.00 0.00 0.00 6.53
375 376 2.556287 GCACTTCCTTCAACGCCG 59.444 61.111 0.00 0.00 0.00 6.46
376 377 2.556287 CGCACTTCCTTCAACGCC 59.444 61.111 0.00 0.00 0.00 5.68
377 378 2.556287 CCGCACTTCCTTCAACGC 59.444 61.111 0.00 0.00 0.00 4.84
378 379 1.597027 ACCCGCACTTCCTTCAACG 60.597 57.895 0.00 0.00 0.00 4.10
379 380 1.949257 CACCCGCACTTCCTTCAAC 59.051 57.895 0.00 0.00 0.00 3.18
380 381 1.896660 GCACCCGCACTTCCTTCAA 60.897 57.895 0.00 0.00 38.36 2.69
381 382 2.281484 GCACCCGCACTTCCTTCA 60.281 61.111 0.00 0.00 38.36 3.02
382 383 3.423154 CGCACCCGCACTTCCTTC 61.423 66.667 0.00 0.00 38.40 3.46
386 387 4.980805 TGACCGCACCCGCACTTC 62.981 66.667 0.00 0.00 38.40 3.01
387 388 4.555709 TTGACCGCACCCGCACTT 62.556 61.111 0.00 0.00 38.40 3.16
388 389 4.988598 CTTGACCGCACCCGCACT 62.989 66.667 0.00 0.00 38.40 4.40
394 395 4.980805 TCCACGCTTGACCGCACC 62.981 66.667 0.00 0.00 0.00 5.01
395 396 3.712881 GTCCACGCTTGACCGCAC 61.713 66.667 0.00 0.00 0.00 5.34
413 414 3.896133 CATCAGCATGGTGGGCGC 61.896 66.667 23.85 0.00 45.53 6.53
424 425 2.475466 CCACATCGGGTGCATCAGC 61.475 63.158 0.00 0.00 46.50 4.26
425 426 0.392863 TTCCACATCGGGTGCATCAG 60.393 55.000 0.00 0.00 46.50 2.90
426 427 0.392863 CTTCCACATCGGGTGCATCA 60.393 55.000 0.00 0.00 46.50 3.07
427 428 1.097547 CCTTCCACATCGGGTGCATC 61.098 60.000 0.00 0.00 46.50 3.91
428 429 1.077501 CCTTCCACATCGGGTGCAT 60.078 57.895 0.00 0.00 46.50 3.96
429 430 2.350895 CCTTCCACATCGGGTGCA 59.649 61.111 3.03 0.00 46.50 4.57
430 431 3.134127 GCCTTCCACATCGGGTGC 61.134 66.667 3.03 0.00 46.50 5.01
432 433 4.096003 CCGCCTTCCACATCGGGT 62.096 66.667 0.00 0.00 38.35 5.28
433 434 3.781307 TCCGCCTTCCACATCGGG 61.781 66.667 0.00 0.00 41.98 5.14
434 435 2.511600 GTCCGCCTTCCACATCGG 60.512 66.667 0.00 0.00 42.96 4.18
435 436 2.511600 GGTCCGCCTTCCACATCG 60.512 66.667 0.00 0.00 0.00 3.84
436 437 2.511600 CGGTCCGCCTTCCACATC 60.512 66.667 0.00 0.00 0.00 3.06
437 438 3.000819 TCGGTCCGCCTTCCACAT 61.001 61.111 6.34 0.00 0.00 3.21
438 439 3.998672 GTCGGTCCGCCTTCCACA 61.999 66.667 6.34 0.00 0.00 4.17
447 448 4.493747 GGGAGAAGCGTCGGTCCG 62.494 72.222 4.39 4.39 0.00 4.79
448 449 4.144703 GGGGAGAAGCGTCGGTCC 62.145 72.222 0.00 0.05 0.00 4.46
449 450 4.493747 CGGGGAGAAGCGTCGGTC 62.494 72.222 0.00 0.00 0.00 4.79
467 468 4.939368 TCCAACAACGGCGGTGGG 62.939 66.667 30.22 21.27 0.00 4.61
468 469 3.656045 GTCCAACAACGGCGGTGG 61.656 66.667 30.22 20.46 0.00 4.61
469 470 4.007940 CGTCCAACAACGGCGGTG 62.008 66.667 25.44 25.44 38.96 4.94
470 471 4.224274 TCGTCCAACAACGGCGGT 62.224 61.111 13.24 0.00 42.80 5.68
471 472 3.708734 GTCGTCCAACAACGGCGG 61.709 66.667 13.24 0.00 42.80 6.13
474 475 1.523934 GTACAAGTCGTCCAACAACGG 59.476 52.381 0.00 0.00 42.80 4.44
475 476 2.195096 TGTACAAGTCGTCCAACAACG 58.805 47.619 0.00 0.00 43.92 4.10
476 477 4.603231 TTTGTACAAGTCGTCCAACAAC 57.397 40.909 8.56 0.00 0.00 3.32
477 478 5.392286 GTTTTTGTACAAGTCGTCCAACAA 58.608 37.500 8.56 0.00 0.00 2.83
478 479 4.142643 GGTTTTTGTACAAGTCGTCCAACA 60.143 41.667 8.56 0.00 0.00 3.33
479 480 4.345288 GGTTTTTGTACAAGTCGTCCAAC 58.655 43.478 8.56 4.90 0.00 3.77
480 481 3.377798 GGGTTTTTGTACAAGTCGTCCAA 59.622 43.478 8.56 0.00 0.00 3.53
481 482 2.944349 GGGTTTTTGTACAAGTCGTCCA 59.056 45.455 8.56 0.00 0.00 4.02
482 483 2.944349 TGGGTTTTTGTACAAGTCGTCC 59.056 45.455 8.56 8.80 0.00 4.79
483 484 3.002965 CCTGGGTTTTTGTACAAGTCGTC 59.997 47.826 8.56 1.49 0.00 4.20
484 485 2.946990 CCTGGGTTTTTGTACAAGTCGT 59.053 45.455 8.56 0.00 0.00 4.34
485 486 2.287368 GCCTGGGTTTTTGTACAAGTCG 60.287 50.000 8.56 0.00 0.00 4.18
486 487 2.956333 AGCCTGGGTTTTTGTACAAGTC 59.044 45.455 8.56 3.66 0.00 3.01
487 488 2.693074 CAGCCTGGGTTTTTGTACAAGT 59.307 45.455 8.56 0.00 0.00 3.16
488 489 2.545742 GCAGCCTGGGTTTTTGTACAAG 60.546 50.000 8.56 0.00 0.00 3.16
489 490 1.410882 GCAGCCTGGGTTTTTGTACAA 59.589 47.619 3.59 3.59 0.00 2.41
490 491 1.036707 GCAGCCTGGGTTTTTGTACA 58.963 50.000 0.00 0.00 0.00 2.90
491 492 0.039527 CGCAGCCTGGGTTTTTGTAC 60.040 55.000 0.00 0.00 0.00 2.90
492 493 2.336341 CGCAGCCTGGGTTTTTGTA 58.664 52.632 0.00 0.00 0.00 2.41
493 494 3.128375 CGCAGCCTGGGTTTTTGT 58.872 55.556 0.00 0.00 0.00 2.83
506 507 4.748679 GAGCTTTGTGCCGCGCAG 62.749 66.667 8.75 0.00 44.23 5.18
509 510 4.389576 GTGGAGCTTTGTGCCGCG 62.390 66.667 0.00 0.00 44.23 6.46
510 511 4.389576 CGTGGAGCTTTGTGCCGC 62.390 66.667 0.00 0.00 44.23 6.53
511 512 4.389576 GCGTGGAGCTTTGTGCCG 62.390 66.667 0.00 0.00 44.23 5.69
512 513 4.389576 CGCGTGGAGCTTTGTGCC 62.390 66.667 0.00 0.00 45.59 5.01
513 514 4.389576 CCGCGTGGAGCTTTGTGC 62.390 66.667 10.20 0.00 45.59 4.57
514 515 3.726517 CCCGCGTGGAGCTTTGTG 61.727 66.667 18.79 0.00 45.59 3.33
515 516 4.250305 ACCCGCGTGGAGCTTTGT 62.250 61.111 18.79 0.77 45.59 2.83
516 517 3.726517 CACCCGCGTGGAGCTTTG 61.727 66.667 18.79 0.02 45.59 2.77
522 523 4.980805 GTTCTGCACCCGCGTGGA 62.981 66.667 18.79 5.72 42.97 4.02
524 525 3.049674 ATGTTCTGCACCCGCGTG 61.050 61.111 4.92 0.00 42.97 5.34
525 526 3.049674 CATGTTCTGCACCCGCGT 61.050 61.111 4.92 0.00 42.97 6.01
555 556 0.037326 CTTCGCAACTGGAGGTAGCA 60.037 55.000 0.00 0.00 0.00 3.49
581 582 1.374125 TTGTCGGTGAGTCATGGCG 60.374 57.895 0.00 0.00 0.00 5.69
666 667 2.044252 TCGTCTCCCCTCCTTCGG 60.044 66.667 0.00 0.00 0.00 4.30
717 718 4.576216 TGCTCTCTCGCTTTCTATTAGG 57.424 45.455 0.00 0.00 0.00 2.69
718 719 6.563753 GCAATTGCTCTCTCGCTTTCTATTAG 60.564 42.308 23.21 0.00 38.21 1.73
719 720 5.235186 GCAATTGCTCTCTCGCTTTCTATTA 59.765 40.000 23.21 0.00 38.21 0.98
728 729 0.443869 TTTCGCAATTGCTCTCTCGC 59.556 50.000 26.86 0.00 39.32 5.03
730 731 3.542712 TGTTTTCGCAATTGCTCTCTC 57.457 42.857 26.86 14.82 39.32 3.20
733 734 2.414559 CCGATGTTTTCGCAATTGCTCT 60.415 45.455 26.86 4.63 46.71 4.09
736 737 1.648681 GACCGATGTTTTCGCAATTGC 59.351 47.619 20.76 20.76 46.71 3.56
744 745 3.429085 GCACATGATGACCGATGTTTTC 58.571 45.455 0.00 0.00 30.14 2.29
760 768 2.167219 CGCACGAATCTCCGCACAT 61.167 57.895 0.00 0.00 0.00 3.21
819 829 1.273455 CGAACGTCGGCTTCGAACTT 61.273 55.000 13.84 0.00 45.10 2.66
820 830 1.728426 CGAACGTCGGCTTCGAACT 60.728 57.895 13.84 0.00 45.10 3.01
950 967 0.603569 GAGTTCTTGGAGCTCGGTGA 59.396 55.000 7.83 2.33 31.01 4.02
1618 1650 1.393858 CGACGACGACGACAAACTTTG 60.394 52.381 15.32 0.00 42.66 2.77
1916 1948 3.698539 TCACTGAAGTTGCCATGTTCAAA 59.301 39.130 0.00 0.00 30.00 2.69
1946 1978 4.907034 CTGACGCCGTCCGATCCG 62.907 72.222 15.60 0.00 41.02 4.18
1996 2028 0.250793 TCAACACACCGACAACAGGT 59.749 50.000 0.00 0.00 43.97 4.00
1997 2029 1.374560 TTCAACACACCGACAACAGG 58.625 50.000 0.00 0.00 0.00 4.00
2144 2996 6.968263 TCAATTGAAGTGGTGTTTTATCCA 57.032 33.333 5.45 0.00 0.00 3.41
2176 3029 4.457810 CATTGACTTGTCACGATCACAAC 58.542 43.478 2.62 0.00 30.49 3.32
2199 3052 1.338020 GGCGCCCAAGAAGATTAATGG 59.662 52.381 18.11 0.00 0.00 3.16
2395 3253 6.543831 CACTTCTTGTCCAGAATAATAAGGGG 59.456 42.308 0.00 0.00 40.95 4.79
2412 3270 1.725641 TATGCAGCCGACACTTCTTG 58.274 50.000 0.00 0.00 0.00 3.02
2440 3298 0.600057 CCCTTGCTGCCTTGAAAGAC 59.400 55.000 0.00 0.00 0.00 3.01
2454 3318 1.067516 CTGTTTCAGTGTTGGCCCTTG 59.932 52.381 0.00 0.00 0.00 3.61
2512 3376 9.844790 TTTTGCTGATATCTGAATAAAGTTGTG 57.155 29.630 13.33 0.00 0.00 3.33
2554 3421 9.132923 CTTGGATGTACTTCAATACTAGGAGTA 57.867 37.037 10.60 0.00 34.82 2.59
2555 3422 7.839705 TCTTGGATGTACTTCAATACTAGGAGT 59.160 37.037 10.60 0.00 0.00 3.85
2556 3423 8.239038 TCTTGGATGTACTTCAATACTAGGAG 57.761 38.462 10.60 0.00 0.00 3.69
2557 3424 8.475639 GTTCTTGGATGTACTTCAATACTAGGA 58.524 37.037 10.60 0.00 0.00 2.94
2558 3425 8.478877 AGTTCTTGGATGTACTTCAATACTAGG 58.521 37.037 10.60 0.00 0.00 3.02
2559 3426 9.307121 CAGTTCTTGGATGTACTTCAATACTAG 57.693 37.037 10.60 0.00 0.00 2.57
2766 3635 4.448720 AAGAAACGGGATTATAAGGGGG 57.551 45.455 0.00 0.00 0.00 5.40
2767 3636 5.442391 TCAAAGAAACGGGATTATAAGGGG 58.558 41.667 0.00 0.00 0.00 4.79
2768 3637 6.459710 GCTTCAAAGAAACGGGATTATAAGGG 60.460 42.308 0.00 0.00 0.00 3.95
2840 3709 3.763897 GGATCTTGCTAAAGCCTTTTGGA 59.236 43.478 0.00 0.00 42.66 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.