Multiple sequence alignment - TraesCS6B01G080900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G080900 | chr6B | 100.000 | 6434 | 0 | 0 | 1 | 6434 | 57414412 | 57420845 | 0.000000e+00 | 11882.0 |
1 | TraesCS6B01G080900 | chr6B | 88.676 | 2402 | 190 | 34 | 3229 | 5569 | 50409585 | 50407205 | 0.000000e+00 | 2854.0 |
2 | TraesCS6B01G080900 | chr6B | 86.311 | 2681 | 273 | 44 | 2844 | 5480 | 79877460 | 79880090 | 0.000000e+00 | 2832.0 |
3 | TraesCS6B01G080900 | chr6B | 83.046 | 2206 | 286 | 45 | 3303 | 5480 | 57733690 | 57731545 | 0.000000e+00 | 1921.0 |
4 | TraesCS6B01G080900 | chr6B | 89.112 | 1295 | 107 | 15 | 4177 | 5462 | 56396144 | 56394875 | 0.000000e+00 | 1580.0 |
5 | TraesCS6B01G080900 | chr6B | 89.788 | 1224 | 98 | 13 | 4262 | 5480 | 56377830 | 56376629 | 0.000000e+00 | 1543.0 |
6 | TraesCS6B01G080900 | chr6B | 82.472 | 987 | 66 | 41 | 1905 | 2846 | 56380283 | 56379359 | 0.000000e+00 | 765.0 |
7 | TraesCS6B01G080900 | chr6B | 87.809 | 648 | 52 | 14 | 2849 | 3483 | 56379327 | 56378694 | 0.000000e+00 | 734.0 |
8 | TraesCS6B01G080900 | chr6B | 81.882 | 861 | 53 | 44 | 2025 | 2846 | 56398309 | 56397513 | 1.180000e-176 | 630.0 |
9 | TraesCS6B01G080900 | chr6B | 83.481 | 678 | 49 | 20 | 1849 | 2489 | 79876362 | 79877013 | 2.010000e-159 | 573.0 |
10 | TraesCS6B01G080900 | chr6B | 85.116 | 430 | 42 | 10 | 818 | 1227 | 57737013 | 57736586 | 2.770000e-113 | 420.0 |
11 | TraesCS6B01G080900 | chr6B | 84.701 | 451 | 33 | 11 | 816 | 1258 | 56399482 | 56399060 | 9.980000e-113 | 418.0 |
12 | TraesCS6B01G080900 | chr6B | 85.037 | 401 | 30 | 8 | 2474 | 2846 | 79877031 | 79877429 | 1.310000e-101 | 381.0 |
13 | TraesCS6B01G080900 | chr6B | 82.090 | 469 | 43 | 14 | 2725 | 3161 | 50410039 | 50409580 | 4.740000e-96 | 363.0 |
14 | TraesCS6B01G080900 | chr6B | 94.397 | 232 | 13 | 0 | 1682 | 1913 | 56398571 | 56398340 | 2.210000e-94 | 357.0 |
15 | TraesCS6B01G080900 | chr6B | 90.588 | 255 | 17 | 6 | 1619 | 1867 | 56380526 | 56380273 | 1.340000e-86 | 331.0 |
16 | TraesCS6B01G080900 | chr6B | 82.064 | 407 | 51 | 12 | 816 | 1210 | 56381575 | 56381179 | 1.730000e-85 | 327.0 |
17 | TraesCS6B01G080900 | chr6B | 81.019 | 216 | 22 | 9 | 5479 | 5688 | 56376569 | 56376367 | 3.110000e-33 | 154.0 |
18 | TraesCS6B01G080900 | chr6B | 92.473 | 93 | 6 | 1 | 6201 | 6292 | 366432032 | 366431940 | 1.460000e-26 | 132.0 |
19 | TraesCS6B01G080900 | chr6B | 88.034 | 117 | 5 | 6 | 5769 | 5883 | 79880609 | 79880718 | 5.240000e-26 | 130.0 |
20 | TraesCS6B01G080900 | chr6B | 87.395 | 119 | 8 | 7 | 6208 | 6321 | 607208216 | 607208100 | 5.240000e-26 | 130.0 |
21 | TraesCS6B01G080900 | chr6A | 93.871 | 5237 | 223 | 42 | 391 | 5585 | 32738857 | 32744037 | 0.000000e+00 | 7803.0 |
22 | TraesCS6B01G080900 | chr6A | 88.599 | 2412 | 192 | 35 | 3226 | 5569 | 45354260 | 45356656 | 0.000000e+00 | 2854.0 |
23 | TraesCS6B01G080900 | chr6A | 86.413 | 2679 | 271 | 39 | 2841 | 5480 | 46699289 | 46696665 | 0.000000e+00 | 2844.0 |
24 | TraesCS6B01G080900 | chr6A | 83.989 | 2211 | 266 | 48 | 3303 | 5480 | 32812175 | 32810020 | 0.000000e+00 | 2041.0 |
25 | TraesCS6B01G080900 | chr6A | 82.574 | 2370 | 302 | 69 | 3252 | 5571 | 32885589 | 32883281 | 0.000000e+00 | 1986.0 |
26 | TraesCS6B01G080900 | chr6A | 88.685 | 1361 | 96 | 25 | 2849 | 4185 | 31753258 | 31751932 | 0.000000e+00 | 1607.0 |
27 | TraesCS6B01G080900 | chr6A | 89.641 | 1226 | 99 | 14 | 4262 | 5480 | 31751847 | 31750643 | 0.000000e+00 | 1535.0 |
28 | TraesCS6B01G080900 | chr6A | 86.606 | 881 | 39 | 29 | 5606 | 6434 | 32744027 | 32744880 | 0.000000e+00 | 900.0 |
29 | TraesCS6B01G080900 | chr6A | 84.783 | 736 | 51 | 15 | 1619 | 2330 | 31754435 | 31753737 | 0.000000e+00 | 682.0 |
30 | TraesCS6B01G080900 | chr6A | 81.576 | 939 | 71 | 46 | 1619 | 2489 | 46700632 | 46699728 | 0.000000e+00 | 682.0 |
31 | TraesCS6B01G080900 | chr6A | 88.095 | 420 | 28 | 9 | 813 | 1211 | 32887973 | 32887555 | 4.510000e-131 | 479.0 |
32 | TraesCS6B01G080900 | chr6A | 85.427 | 398 | 30 | 13 | 2474 | 2846 | 46699710 | 46699316 | 7.820000e-104 | 388.0 |
33 | TraesCS6B01G080900 | chr6A | 84.661 | 339 | 25 | 12 | 2841 | 3163 | 45353938 | 45354265 | 4.840000e-81 | 313.0 |
34 | TraesCS6B01G080900 | chr6A | 79.747 | 474 | 41 | 26 | 2399 | 2846 | 31753733 | 31753289 | 6.310000e-75 | 292.0 |
35 | TraesCS6B01G080900 | chr6A | 81.481 | 216 | 21 | 7 | 5479 | 5688 | 31750583 | 31750381 | 6.680000e-35 | 159.0 |
36 | TraesCS6B01G080900 | chr6A | 75.312 | 320 | 39 | 14 | 857 | 1142 | 45352608 | 45352921 | 4.080000e-22 | 117.0 |
37 | TraesCS6B01G080900 | chr6A | 89.583 | 96 | 4 | 3 | 5790 | 5883 | 46696077 | 46695986 | 4.080000e-22 | 117.0 |
38 | TraesCS6B01G080900 | chr6A | 86.207 | 87 | 12 | 0 | 1536 | 1622 | 32740037 | 32740123 | 1.910000e-15 | 95.3 |
39 | TraesCS6B01G080900 | chr6A | 84.722 | 72 | 2 | 5 | 5851 | 5922 | 45356927 | 45356989 | 5.390000e-06 | 63.9 |
40 | TraesCS6B01G080900 | chr6D | 94.776 | 4824 | 143 | 34 | 820 | 5585 | 30099820 | 30095048 | 0.000000e+00 | 7411.0 |
41 | TraesCS6B01G080900 | chr6D | 89.143 | 2671 | 206 | 39 | 2849 | 5480 | 31269822 | 31267197 | 0.000000e+00 | 3249.0 |
42 | TraesCS6B01G080900 | chr6D | 81.792 | 2444 | 312 | 77 | 3252 | 5642 | 29851358 | 29853721 | 0.000000e+00 | 1925.0 |
43 | TraesCS6B01G080900 | chr6D | 82.978 | 2203 | 288 | 43 | 3303 | 5480 | 29925581 | 29927721 | 0.000000e+00 | 1910.0 |
44 | TraesCS6B01G080900 | chr6D | 89.257 | 1359 | 88 | 22 | 2849 | 4185 | 31471827 | 31473149 | 0.000000e+00 | 1648.0 |
45 | TraesCS6B01G080900 | chr6D | 86.259 | 1470 | 126 | 33 | 4262 | 5688 | 31473234 | 31474670 | 0.000000e+00 | 1526.0 |
46 | TraesCS6B01G080900 | chr6D | 90.638 | 940 | 42 | 18 | 1675 | 2588 | 31270888 | 31269969 | 0.000000e+00 | 1206.0 |
47 | TraesCS6B01G080900 | chr6D | 82.842 | 1288 | 97 | 49 | 1619 | 2846 | 31470572 | 31471795 | 0.000000e+00 | 1040.0 |
48 | TraesCS6B01G080900 | chr6D | 92.190 | 653 | 18 | 7 | 5606 | 6248 | 30095058 | 30094429 | 0.000000e+00 | 893.0 |
49 | TraesCS6B01G080900 | chr6D | 88.916 | 415 | 32 | 7 | 804 | 1211 | 29848959 | 29849366 | 3.460000e-137 | 499.0 |
50 | TraesCS6B01G080900 | chr6D | 85.268 | 448 | 33 | 6 | 816 | 1258 | 31271648 | 31271229 | 1.280000e-116 | 431.0 |
51 | TraesCS6B01G080900 | chr6D | 83.841 | 427 | 37 | 14 | 810 | 1216 | 29922316 | 29922730 | 1.690000e-100 | 377.0 |
52 | TraesCS6B01G080900 | chr6D | 82.725 | 411 | 49 | 12 | 816 | 1211 | 31469698 | 31470101 | 4.780000e-91 | 346.0 |
53 | TraesCS6B01G080900 | chr6D | 85.135 | 296 | 29 | 9 | 5479 | 5764 | 31267137 | 31266847 | 8.160000e-74 | 289.0 |
54 | TraesCS6B01G080900 | chr6D | 87.421 | 159 | 7 | 2 | 6288 | 6434 | 30094424 | 30094267 | 3.080000e-38 | 171.0 |
55 | TraesCS6B01G080900 | chr6D | 91.566 | 83 | 2 | 2 | 5802 | 5883 | 31266846 | 31266768 | 6.820000e-20 | 110.0 |
56 | TraesCS6B01G080900 | chr6D | 85.714 | 84 | 12 | 0 | 1539 | 1622 | 30099063 | 30098980 | 8.890000e-14 | 89.8 |
57 | TraesCS6B01G080900 | chrUn | 86.555 | 2685 | 269 | 44 | 2841 | 5480 | 27473131 | 27475768 | 0.000000e+00 | 2874.0 |
58 | TraesCS6B01G080900 | chrUn | 87.879 | 2475 | 184 | 47 | 3229 | 5642 | 137913395 | 137910976 | 0.000000e+00 | 2802.0 |
59 | TraesCS6B01G080900 | chrUn | 81.703 | 951 | 74 | 44 | 1619 | 2489 | 27471762 | 27472692 | 0.000000e+00 | 701.0 |
60 | TraesCS6B01G080900 | chrUn | 85.352 | 512 | 51 | 10 | 1619 | 2110 | 68355780 | 68356287 | 5.760000e-140 | 508.0 |
61 | TraesCS6B01G080900 | chrUn | 84.861 | 502 | 55 | 14 | 1619 | 2110 | 268239308 | 268239798 | 2.700000e-133 | 486.0 |
62 | TraesCS6B01G080900 | chrUn | 84.861 | 502 | 55 | 14 | 1619 | 2110 | 312454603 | 312454113 | 2.700000e-133 | 486.0 |
63 | TraesCS6B01G080900 | chrUn | 85.930 | 398 | 28 | 13 | 2474 | 2846 | 27472710 | 27473104 | 3.610000e-107 | 399.0 |
64 | TraesCS6B01G080900 | chrUn | 76.888 | 662 | 86 | 24 | 829 | 1437 | 312455261 | 312454614 | 4.840000e-81 | 313.0 |
65 | TraesCS6B01G080900 | chrUn | 76.586 | 662 | 88 | 24 | 829 | 1437 | 268238650 | 268239297 | 1.050000e-77 | 302.0 |
66 | TraesCS6B01G080900 | chrUn | 83.382 | 343 | 26 | 13 | 2841 | 3163 | 137913724 | 137913393 | 8.160000e-74 | 289.0 |
67 | TraesCS6B01G080900 | chrUn | 79.167 | 312 | 35 | 14 | 1144 | 1437 | 68355470 | 68355769 | 8.520000e-44 | 189.0 |
68 | TraesCS6B01G080900 | chrUn | 86.885 | 122 | 15 | 1 | 2725 | 2846 | 137913871 | 137913751 | 1.130000e-27 | 135.0 |
69 | TraesCS6B01G080900 | chrUn | 88.034 | 117 | 5 | 4 | 5769 | 5883 | 27476299 | 27476408 | 5.240000e-26 | 130.0 |
70 | TraesCS6B01G080900 | chrUn | 86.022 | 93 | 13 | 0 | 1712 | 1804 | 27471868 | 27471960 | 4.100000e-17 | 100.0 |
71 | TraesCS6B01G080900 | chr2D | 86.384 | 1131 | 77 | 25 | 1616 | 2694 | 48562890 | 48563995 | 0.000000e+00 | 1164.0 |
72 | TraesCS6B01G080900 | chr2D | 84.430 | 623 | 63 | 15 | 814 | 1405 | 48562240 | 48562859 | 3.340000e-162 | 582.0 |
73 | TraesCS6B01G080900 | chr2D | 81.356 | 177 | 17 | 2 | 5409 | 5569 | 48567625 | 48567801 | 5.240000e-26 | 130.0 |
74 | TraesCS6B01G080900 | chr2B | 87.070 | 727 | 80 | 8 | 4163 | 4879 | 96277603 | 96278325 | 0.000000e+00 | 809.0 |
75 | TraesCS6B01G080900 | chr2B | 83.900 | 441 | 35 | 15 | 1849 | 2268 | 13182957 | 13183382 | 7.820000e-104 | 388.0 |
76 | TraesCS6B01G080900 | chr3B | 86.795 | 727 | 82 | 9 | 4163 | 4879 | 701122829 | 701122107 | 0.000000e+00 | 798.0 |
77 | TraesCS6B01G080900 | chr3B | 86.501 | 726 | 86 | 8 | 4163 | 4879 | 753065793 | 753066515 | 0.000000e+00 | 787.0 |
78 | TraesCS6B01G080900 | chr3B | 92.000 | 100 | 5 | 3 | 6194 | 6291 | 3660869 | 3660771 | 3.130000e-28 | 137.0 |
79 | TraesCS6B01G080900 | chr3B | 75.676 | 222 | 50 | 4 | 175 | 393 | 440675508 | 440675728 | 2.450000e-19 | 108.0 |
80 | TraesCS6B01G080900 | chr3B | 77.108 | 166 | 32 | 5 | 167 | 329 | 732945557 | 732945395 | 2.470000e-14 | 91.6 |
81 | TraesCS6B01G080900 | chr4B | 86.676 | 728 | 81 | 11 | 4163 | 4879 | 614205369 | 614204647 | 0.000000e+00 | 793.0 |
82 | TraesCS6B01G080900 | chr4B | 78.680 | 197 | 32 | 8 | 207 | 397 | 646377513 | 646377321 | 8.760000e-24 | 122.0 |
83 | TraesCS6B01G080900 | chr4B | 87.952 | 83 | 6 | 4 | 5769 | 5850 | 585760961 | 585760882 | 1.910000e-15 | 95.3 |
84 | TraesCS6B01G080900 | chr7B | 86.520 | 727 | 84 | 9 | 4163 | 4879 | 680449707 | 680450429 | 0.000000e+00 | 787.0 |
85 | TraesCS6B01G080900 | chr7B | 86.382 | 727 | 84 | 10 | 4163 | 4879 | 680418542 | 680419263 | 0.000000e+00 | 780.0 |
86 | TraesCS6B01G080900 | chr7B | 83.088 | 136 | 20 | 3 | 224 | 356 | 166783500 | 166783635 | 3.150000e-23 | 121.0 |
87 | TraesCS6B01G080900 | chr5B | 83.432 | 507 | 49 | 15 | 1619 | 2111 | 664801963 | 664802448 | 7.660000e-119 | 438.0 |
88 | TraesCS6B01G080900 | chr5B | 77.563 | 673 | 91 | 28 | 810 | 1437 | 664801295 | 664801952 | 1.030000e-92 | 351.0 |
89 | TraesCS6B01G080900 | chr5B | 77.664 | 685 | 81 | 29 | 810 | 1437 | 664892401 | 664893070 | 1.030000e-92 | 351.0 |
90 | TraesCS6B01G080900 | chr5B | 91.579 | 95 | 6 | 2 | 6198 | 6291 | 97296928 | 97297021 | 5.240000e-26 | 130.0 |
91 | TraesCS6B01G080900 | chr5B | 87.654 | 81 | 6 | 4 | 5769 | 5848 | 346850793 | 346850870 | 2.470000e-14 | 91.6 |
92 | TraesCS6B01G080900 | chr5B | 74.479 | 192 | 41 | 7 | 207 | 393 | 711989397 | 711989209 | 6.920000e-10 | 76.8 |
93 | TraesCS6B01G080900 | chr5A | 87.640 | 267 | 23 | 4 | 1851 | 2110 | 655640962 | 655641225 | 1.050000e-77 | 302.0 |
94 | TraesCS6B01G080900 | chr5A | 75.342 | 219 | 46 | 7 | 180 | 393 | 436085052 | 436084837 | 1.480000e-16 | 99.0 |
95 | TraesCS6B01G080900 | chr7D | 81.509 | 265 | 45 | 4 | 537 | 799 | 635838214 | 635838476 | 1.400000e-51 | 215.0 |
96 | TraesCS6B01G080900 | chr7D | 94.505 | 91 | 4 | 1 | 6203 | 6292 | 433886376 | 433886466 | 8.700000e-29 | 139.0 |
97 | TraesCS6B01G080900 | chr2A | 93.478 | 92 | 5 | 1 | 6208 | 6298 | 16151586 | 16151495 | 1.130000e-27 | 135.0 |
98 | TraesCS6B01G080900 | chr1B | 88.393 | 112 | 9 | 4 | 6201 | 6309 | 631232669 | 631232779 | 1.460000e-26 | 132.0 |
99 | TraesCS6B01G080900 | chr7A | 89.320 | 103 | 7 | 4 | 6193 | 6291 | 129877041 | 129876939 | 6.770000e-25 | 126.0 |
100 | TraesCS6B01G080900 | chr1D | 77.626 | 219 | 42 | 6 | 175 | 388 | 389330778 | 389330994 | 6.770000e-25 | 126.0 |
101 | TraesCS6B01G080900 | chr1D | 78.571 | 168 | 30 | 5 | 198 | 361 | 325966406 | 325966571 | 8.820000e-19 | 106.0 |
102 | TraesCS6B01G080900 | chr5D | 75.893 | 224 | 46 | 7 | 175 | 393 | 104109035 | 104108815 | 2.450000e-19 | 108.0 |
103 | TraesCS6B01G080900 | chr1A | 78.400 | 125 | 22 | 5 | 222 | 343 | 26333141 | 26333019 | 6.920000e-10 | 76.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G080900 | chr6B | 57414412 | 57420845 | 6433 | False | 11882.000000 | 11882 | 100.000000 | 1 | 6434 | 1 | chr6B.!!$F1 | 6433 |
1 | TraesCS6B01G080900 | chr6B | 50407205 | 50410039 | 2834 | True | 1608.500000 | 2854 | 85.383000 | 2725 | 5569 | 2 | chr6B.!!$R3 | 2844 |
2 | TraesCS6B01G080900 | chr6B | 57731545 | 57737013 | 5468 | True | 1170.500000 | 1921 | 84.081000 | 818 | 5480 | 2 | chr6B.!!$R6 | 4662 |
3 | TraesCS6B01G080900 | chr6B | 79876362 | 79880718 | 4356 | False | 979.000000 | 2832 | 85.715750 | 1849 | 5883 | 4 | chr6B.!!$F2 | 4034 |
4 | TraesCS6B01G080900 | chr6B | 56394875 | 56399482 | 4607 | True | 746.250000 | 1580 | 87.523000 | 816 | 5462 | 4 | chr6B.!!$R5 | 4646 |
5 | TraesCS6B01G080900 | chr6B | 56376367 | 56381575 | 5208 | True | 642.333333 | 1543 | 85.623333 | 816 | 5688 | 6 | chr6B.!!$R4 | 4872 |
6 | TraesCS6B01G080900 | chr6A | 32738857 | 32744037 | 5180 | False | 7803.000000 | 7803 | 93.871000 | 391 | 5585 | 1 | chr6A.!!$F1 | 5194 |
7 | TraesCS6B01G080900 | chr6A | 32810020 | 32812175 | 2155 | True | 2041.000000 | 2041 | 83.989000 | 3303 | 5480 | 1 | chr6A.!!$R1 | 2177 |
8 | TraesCS6B01G080900 | chr6A | 32883281 | 32887973 | 4692 | True | 1232.500000 | 1986 | 85.334500 | 813 | 5571 | 2 | chr6A.!!$R3 | 4758 |
9 | TraesCS6B01G080900 | chr6A | 46695986 | 46700632 | 4646 | True | 1007.750000 | 2844 | 85.749750 | 1619 | 5883 | 4 | chr6A.!!$R4 | 4264 |
10 | TraesCS6B01G080900 | chr6A | 31750381 | 31754435 | 4054 | True | 855.000000 | 1607 | 84.867400 | 1619 | 5688 | 5 | chr6A.!!$R2 | 4069 |
11 | TraesCS6B01G080900 | chr6A | 45352608 | 45356989 | 4381 | False | 836.975000 | 2854 | 83.323500 | 857 | 5922 | 4 | chr6A.!!$F3 | 5065 |
12 | TraesCS6B01G080900 | chr6A | 32740037 | 32744880 | 4843 | False | 497.650000 | 900 | 86.406500 | 1536 | 6434 | 2 | chr6A.!!$F2 | 4898 |
13 | TraesCS6B01G080900 | chr6D | 30094267 | 30099820 | 5553 | True | 2141.200000 | 7411 | 90.025250 | 820 | 6434 | 4 | chr6D.!!$R1 | 5614 |
14 | TraesCS6B01G080900 | chr6D | 29848959 | 29853721 | 4762 | False | 1212.000000 | 1925 | 85.354000 | 804 | 5642 | 2 | chr6D.!!$F1 | 4838 |
15 | TraesCS6B01G080900 | chr6D | 29922316 | 29927721 | 5405 | False | 1143.500000 | 1910 | 83.409500 | 810 | 5480 | 2 | chr6D.!!$F2 | 4670 |
16 | TraesCS6B01G080900 | chr6D | 31469698 | 31474670 | 4972 | False | 1140.000000 | 1648 | 85.270750 | 816 | 5688 | 4 | chr6D.!!$F3 | 4872 |
17 | TraesCS6B01G080900 | chr6D | 31266768 | 31271648 | 4880 | True | 1057.000000 | 3249 | 88.350000 | 816 | 5883 | 5 | chr6D.!!$R2 | 5067 |
18 | TraesCS6B01G080900 | chrUn | 137910976 | 137913871 | 2895 | True | 1075.333333 | 2802 | 86.048667 | 2725 | 5642 | 3 | chrUn.!!$R1 | 2917 |
19 | TraesCS6B01G080900 | chrUn | 27471762 | 27476408 | 4646 | False | 840.800000 | 2874 | 85.648800 | 1619 | 5883 | 5 | chrUn.!!$F1 | 4264 |
20 | TraesCS6B01G080900 | chrUn | 312454113 | 312455261 | 1148 | True | 399.500000 | 486 | 80.874500 | 829 | 2110 | 2 | chrUn.!!$R2 | 1281 |
21 | TraesCS6B01G080900 | chrUn | 268238650 | 268239798 | 1148 | False | 394.000000 | 486 | 80.723500 | 829 | 2110 | 2 | chrUn.!!$F3 | 1281 |
22 | TraesCS6B01G080900 | chrUn | 68355470 | 68356287 | 817 | False | 348.500000 | 508 | 82.259500 | 1144 | 2110 | 2 | chrUn.!!$F2 | 966 |
23 | TraesCS6B01G080900 | chr2D | 48562240 | 48567801 | 5561 | False | 625.333333 | 1164 | 84.056667 | 814 | 5569 | 3 | chr2D.!!$F1 | 4755 |
24 | TraesCS6B01G080900 | chr2B | 96277603 | 96278325 | 722 | False | 809.000000 | 809 | 87.070000 | 4163 | 4879 | 1 | chr2B.!!$F2 | 716 |
25 | TraesCS6B01G080900 | chr3B | 701122107 | 701122829 | 722 | True | 798.000000 | 798 | 86.795000 | 4163 | 4879 | 1 | chr3B.!!$R2 | 716 |
26 | TraesCS6B01G080900 | chr3B | 753065793 | 753066515 | 722 | False | 787.000000 | 787 | 86.501000 | 4163 | 4879 | 1 | chr3B.!!$F2 | 716 |
27 | TraesCS6B01G080900 | chr4B | 614204647 | 614205369 | 722 | True | 793.000000 | 793 | 86.676000 | 4163 | 4879 | 1 | chr4B.!!$R2 | 716 |
28 | TraesCS6B01G080900 | chr7B | 680449707 | 680450429 | 722 | False | 787.000000 | 787 | 86.520000 | 4163 | 4879 | 1 | chr7B.!!$F3 | 716 |
29 | TraesCS6B01G080900 | chr7B | 680418542 | 680419263 | 721 | False | 780.000000 | 780 | 86.382000 | 4163 | 4879 | 1 | chr7B.!!$F2 | 716 |
30 | TraesCS6B01G080900 | chr5B | 664801295 | 664802448 | 1153 | False | 394.500000 | 438 | 80.497500 | 810 | 2111 | 2 | chr5B.!!$F4 | 1301 |
31 | TraesCS6B01G080900 | chr5B | 664892401 | 664893070 | 669 | False | 351.000000 | 351 | 77.664000 | 810 | 1437 | 1 | chr5B.!!$F3 | 627 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
245 | 246 | 0.034089 | TCCTGTGAGATCGCTGGAGA | 60.034 | 55.000 | 15.55 | 0.0 | 45.45 | 3.71 | F |
274 | 275 | 0.038166 | ACATGCCCTCCAACGATGTT | 59.962 | 50.000 | 0.00 | 0.0 | 0.00 | 2.71 | F |
634 | 637 | 0.108396 | CGGATGATGGTGGCCATGTA | 59.892 | 55.000 | 9.72 | 0.0 | 45.26 | 2.29 | F |
1713 | 2569 | 1.270907 | TGGAGTTCTTGGAGCCTCTC | 58.729 | 55.000 | 0.00 | 0.0 | 0.00 | 3.20 | F |
2541 | 4427 | 3.056107 | TCGAGTCAAGAACAAGGTATGGG | 60.056 | 47.826 | 0.00 | 0.0 | 0.00 | 4.00 | F |
3022 | 6680 | 0.385751 | TCGGCGATCACTTCAGGATC | 59.614 | 55.000 | 4.99 | 0.0 | 38.20 | 3.36 | F |
4425 | 8975 | 1.613437 | CTTGCAAAGGAACAACGGGAT | 59.387 | 47.619 | 0.00 | 0.0 | 41.27 | 3.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1713 | 2569 | 1.548973 | AACGCTCAAGAACGCACTCG | 61.549 | 55.000 | 0.00 | 0.0 | 42.43 | 4.18 | R |
2246 | 3330 | 3.688694 | TGTACGTCTGGCCAAGTAATT | 57.311 | 42.857 | 7.01 | 0.0 | 0.00 | 1.40 | R |
2522 | 4408 | 2.644798 | AGCCCATACCTTGTTCTTGACT | 59.355 | 45.455 | 0.00 | 0.0 | 0.00 | 3.41 | R |
3022 | 6680 | 1.813513 | ATGGCGAAACTTCTCACCAG | 58.186 | 50.000 | 0.00 | 0.0 | 0.00 | 4.00 | R |
3534 | 7384 | 5.527214 | TCACAACCAAGAGTCAACATACAAG | 59.473 | 40.000 | 0.00 | 0.0 | 0.00 | 3.16 | R |
4798 | 9411 | 1.331756 | GATGGAATGCACTTGGCTACG | 59.668 | 52.381 | 0.00 | 0.0 | 45.15 | 3.51 | R |
6037 | 11220 | 1.519719 | CAGGGTAGCCAGCAGAGAC | 59.480 | 63.158 | 14.62 | 0.0 | 0.00 | 3.36 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
23 | 24 | 5.779922 | TGTTACTCAAGCAAAGTATCGACT | 58.220 | 37.500 | 0.00 | 0.00 | 37.59 | 4.18 |
25 | 26 | 6.145534 | TGTTACTCAAGCAAAGTATCGACTTG | 59.854 | 38.462 | 3.90 | 3.90 | 45.50 | 3.16 |
26 | 27 | 4.883083 | ACTCAAGCAAAGTATCGACTTGA | 58.117 | 39.130 | 10.73 | 10.73 | 45.50 | 3.02 |
28 | 29 | 5.134202 | TCAAGCAAAGTATCGACTTGAGA | 57.866 | 39.130 | 7.95 | 0.00 | 45.50 | 3.27 |
29 | 30 | 5.538118 | TCAAGCAAAGTATCGACTTGAGAA | 58.462 | 37.500 | 7.95 | 0.00 | 45.50 | 2.87 |
30 | 31 | 6.166279 | TCAAGCAAAGTATCGACTTGAGAAT | 58.834 | 36.000 | 7.95 | 0.00 | 45.50 | 2.40 |
31 | 32 | 7.320399 | TCAAGCAAAGTATCGACTTGAGAATA | 58.680 | 34.615 | 7.95 | 0.00 | 45.50 | 1.75 |
32 | 33 | 7.275779 | TCAAGCAAAGTATCGACTTGAGAATAC | 59.724 | 37.037 | 7.95 | 0.00 | 45.50 | 1.89 |
33 | 34 | 6.043411 | AGCAAAGTATCGACTTGAGAATACC | 58.957 | 40.000 | 0.00 | 0.00 | 45.50 | 2.73 |
34 | 35 | 5.810587 | GCAAAGTATCGACTTGAGAATACCA | 59.189 | 40.000 | 0.00 | 0.00 | 45.50 | 3.25 |
35 | 36 | 6.312918 | GCAAAGTATCGACTTGAGAATACCAA | 59.687 | 38.462 | 0.00 | 0.00 | 45.50 | 3.67 |
36 | 37 | 7.674240 | GCAAAGTATCGACTTGAGAATACCAAC | 60.674 | 40.741 | 0.00 | 0.00 | 45.50 | 3.77 |
37 | 38 | 6.777213 | AGTATCGACTTGAGAATACCAACT | 57.223 | 37.500 | 0.00 | 0.00 | 28.61 | 3.16 |
38 | 39 | 7.171630 | AGTATCGACTTGAGAATACCAACTT | 57.828 | 36.000 | 0.00 | 0.00 | 28.61 | 2.66 |
39 | 40 | 7.259161 | AGTATCGACTTGAGAATACCAACTTC | 58.741 | 38.462 | 0.00 | 0.00 | 28.61 | 3.01 |
40 | 41 | 4.482386 | TCGACTTGAGAATACCAACTTCG | 58.518 | 43.478 | 0.00 | 0.00 | 0.00 | 3.79 |
41 | 42 | 3.060895 | CGACTTGAGAATACCAACTTCGC | 59.939 | 47.826 | 0.00 | 0.00 | 0.00 | 4.70 |
42 | 43 | 3.994392 | GACTTGAGAATACCAACTTCGCA | 59.006 | 43.478 | 0.00 | 0.00 | 31.80 | 5.10 |
43 | 44 | 4.579869 | ACTTGAGAATACCAACTTCGCAT | 58.420 | 39.130 | 0.00 | 0.00 | 33.42 | 4.73 |
44 | 45 | 4.393062 | ACTTGAGAATACCAACTTCGCATG | 59.607 | 41.667 | 0.00 | 0.00 | 33.42 | 4.06 |
45 | 46 | 3.937814 | TGAGAATACCAACTTCGCATGT | 58.062 | 40.909 | 0.00 | 0.00 | 29.22 | 3.21 |
46 | 47 | 5.079689 | TGAGAATACCAACTTCGCATGTA | 57.920 | 39.130 | 0.00 | 0.00 | 29.22 | 2.29 |
47 | 48 | 5.483811 | TGAGAATACCAACTTCGCATGTAA | 58.516 | 37.500 | 0.00 | 0.00 | 29.22 | 2.41 |
48 | 49 | 5.935206 | TGAGAATACCAACTTCGCATGTAAA | 59.065 | 36.000 | 0.00 | 0.00 | 29.22 | 2.01 |
49 | 50 | 6.597672 | TGAGAATACCAACTTCGCATGTAAAT | 59.402 | 34.615 | 0.00 | 0.00 | 29.22 | 1.40 |
50 | 51 | 7.120579 | TGAGAATACCAACTTCGCATGTAAATT | 59.879 | 33.333 | 0.00 | 0.00 | 29.22 | 1.82 |
51 | 52 | 7.826690 | AGAATACCAACTTCGCATGTAAATTT | 58.173 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
52 | 53 | 8.952278 | AGAATACCAACTTCGCATGTAAATTTA | 58.048 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
53 | 54 | 8.905103 | AATACCAACTTCGCATGTAAATTTAC | 57.095 | 30.769 | 19.44 | 19.44 | 0.00 | 2.01 |
54 | 55 | 6.569179 | ACCAACTTCGCATGTAAATTTACT | 57.431 | 33.333 | 24.81 | 10.99 | 34.77 | 2.24 |
55 | 56 | 6.977213 | ACCAACTTCGCATGTAAATTTACTT | 58.023 | 32.000 | 24.81 | 17.70 | 34.77 | 2.24 |
56 | 57 | 6.861055 | ACCAACTTCGCATGTAAATTTACTTG | 59.139 | 34.615 | 27.61 | 27.61 | 40.06 | 3.16 |
57 | 58 | 6.307800 | CCAACTTCGCATGTAAATTTACTTGG | 59.692 | 38.462 | 30.30 | 24.75 | 38.51 | 3.61 |
58 | 59 | 5.399013 | ACTTCGCATGTAAATTTACTTGGC | 58.601 | 37.500 | 30.30 | 25.14 | 38.51 | 4.52 |
59 | 60 | 5.048364 | ACTTCGCATGTAAATTTACTTGGCA | 60.048 | 36.000 | 30.30 | 17.69 | 38.51 | 4.92 |
60 | 61 | 4.980590 | TCGCATGTAAATTTACTTGGCAG | 58.019 | 39.130 | 30.30 | 22.26 | 38.51 | 4.85 |
61 | 62 | 4.697828 | TCGCATGTAAATTTACTTGGCAGA | 59.302 | 37.500 | 30.30 | 23.40 | 38.51 | 4.26 |
62 | 63 | 4.793216 | CGCATGTAAATTTACTTGGCAGAC | 59.207 | 41.667 | 30.30 | 19.15 | 38.51 | 3.51 |
63 | 64 | 5.618863 | CGCATGTAAATTTACTTGGCAGACA | 60.619 | 40.000 | 30.30 | 14.02 | 38.51 | 3.41 |
64 | 65 | 6.155827 | GCATGTAAATTTACTTGGCAGACAA | 58.844 | 36.000 | 30.30 | 11.38 | 38.51 | 3.18 |
65 | 66 | 6.813152 | GCATGTAAATTTACTTGGCAGACAAT | 59.187 | 34.615 | 30.30 | 12.75 | 38.65 | 2.71 |
66 | 67 | 7.973388 | GCATGTAAATTTACTTGGCAGACAATA | 59.027 | 33.333 | 30.30 | 10.83 | 38.65 | 1.90 |
67 | 68 | 9.507280 | CATGTAAATTTACTTGGCAGACAATAG | 57.493 | 33.333 | 25.67 | 6.09 | 38.65 | 1.73 |
68 | 69 | 8.630054 | TGTAAATTTACTTGGCAGACAATAGT | 57.370 | 30.769 | 24.81 | 0.00 | 38.65 | 2.12 |
69 | 70 | 8.726988 | TGTAAATTTACTTGGCAGACAATAGTC | 58.273 | 33.333 | 24.81 | 0.00 | 38.65 | 2.59 |
70 | 71 | 6.759497 | AATTTACTTGGCAGACAATAGTCC | 57.241 | 37.500 | 0.00 | 0.00 | 46.15 | 3.85 |
71 | 72 | 4.901197 | TTACTTGGCAGACAATAGTCCA | 57.099 | 40.909 | 0.00 | 0.00 | 46.15 | 4.02 |
72 | 73 | 3.340814 | ACTTGGCAGACAATAGTCCAG | 57.659 | 47.619 | 0.00 | 0.00 | 46.15 | 3.86 |
73 | 74 | 2.012673 | CTTGGCAGACAATAGTCCAGC | 58.987 | 52.381 | 0.00 | 0.00 | 46.15 | 4.85 |
74 | 75 | 1.279496 | TGGCAGACAATAGTCCAGCT | 58.721 | 50.000 | 9.47 | 0.00 | 46.15 | 4.24 |
75 | 76 | 1.630369 | TGGCAGACAATAGTCCAGCTT | 59.370 | 47.619 | 9.47 | 0.00 | 46.15 | 3.74 |
76 | 77 | 2.837591 | TGGCAGACAATAGTCCAGCTTA | 59.162 | 45.455 | 9.47 | 0.00 | 46.15 | 3.09 |
77 | 78 | 3.118629 | TGGCAGACAATAGTCCAGCTTAG | 60.119 | 47.826 | 9.47 | 0.00 | 46.15 | 2.18 |
78 | 79 | 3.133003 | GGCAGACAATAGTCCAGCTTAGA | 59.867 | 47.826 | 9.47 | 0.00 | 46.15 | 2.10 |
79 | 80 | 4.383118 | GGCAGACAATAGTCCAGCTTAGAA | 60.383 | 45.833 | 9.47 | 0.00 | 46.15 | 2.10 |
80 | 81 | 4.808364 | GCAGACAATAGTCCAGCTTAGAAG | 59.192 | 45.833 | 0.00 | 0.00 | 46.15 | 2.85 |
81 | 82 | 5.625656 | GCAGACAATAGTCCAGCTTAGAAGT | 60.626 | 44.000 | 0.00 | 0.00 | 46.15 | 3.01 |
82 | 83 | 6.405953 | GCAGACAATAGTCCAGCTTAGAAGTA | 60.406 | 42.308 | 0.00 | 0.00 | 46.15 | 2.24 |
83 | 84 | 6.975772 | CAGACAATAGTCCAGCTTAGAAGTAC | 59.024 | 42.308 | 0.00 | 0.00 | 46.15 | 2.73 |
84 | 85 | 6.893005 | AGACAATAGTCCAGCTTAGAAGTACT | 59.107 | 38.462 | 0.00 | 0.00 | 46.15 | 2.73 |
85 | 86 | 8.053963 | AGACAATAGTCCAGCTTAGAAGTACTA | 58.946 | 37.037 | 0.00 | 0.00 | 46.15 | 1.82 |
86 | 87 | 8.228035 | ACAATAGTCCAGCTTAGAAGTACTAG | 57.772 | 38.462 | 0.00 | 0.00 | 32.30 | 2.57 |
87 | 88 | 8.053963 | ACAATAGTCCAGCTTAGAAGTACTAGA | 58.946 | 37.037 | 0.00 | 0.00 | 32.30 | 2.43 |
88 | 89 | 8.904834 | CAATAGTCCAGCTTAGAAGTACTAGAA | 58.095 | 37.037 | 0.00 | 0.00 | 32.30 | 2.10 |
89 | 90 | 6.762702 | AGTCCAGCTTAGAAGTACTAGAAC | 57.237 | 41.667 | 0.00 | 0.00 | 32.30 | 3.01 |
90 | 91 | 6.486941 | AGTCCAGCTTAGAAGTACTAGAACT | 58.513 | 40.000 | 0.00 | 0.00 | 32.30 | 3.01 |
91 | 92 | 6.376018 | AGTCCAGCTTAGAAGTACTAGAACTG | 59.624 | 42.308 | 0.00 | 0.00 | 32.30 | 3.16 |
92 | 93 | 5.652891 | TCCAGCTTAGAAGTACTAGAACTGG | 59.347 | 44.000 | 17.23 | 17.23 | 42.28 | 4.00 |
93 | 94 | 5.344884 | CAGCTTAGAAGTACTAGAACTGGC | 58.655 | 45.833 | 0.00 | 4.04 | 32.30 | 4.85 |
94 | 95 | 4.403113 | AGCTTAGAAGTACTAGAACTGGCC | 59.597 | 45.833 | 0.00 | 0.00 | 32.30 | 5.36 |
95 | 96 | 4.734108 | GCTTAGAAGTACTAGAACTGGCCG | 60.734 | 50.000 | 0.00 | 0.00 | 32.30 | 6.13 |
96 | 97 | 2.100989 | AGAAGTACTAGAACTGGCCGG | 58.899 | 52.381 | 11.02 | 11.02 | 0.00 | 6.13 |
97 | 98 | 2.097825 | GAAGTACTAGAACTGGCCGGA | 58.902 | 52.381 | 21.41 | 0.00 | 0.00 | 5.14 |
98 | 99 | 2.226962 | AGTACTAGAACTGGCCGGAA | 57.773 | 50.000 | 21.41 | 0.00 | 0.00 | 4.30 |
99 | 100 | 2.532843 | AGTACTAGAACTGGCCGGAAA | 58.467 | 47.619 | 21.41 | 0.00 | 0.00 | 3.13 |
100 | 101 | 2.233186 | AGTACTAGAACTGGCCGGAAAC | 59.767 | 50.000 | 21.41 | 8.91 | 0.00 | 2.78 |
101 | 102 | 1.053424 | ACTAGAACTGGCCGGAAACA | 58.947 | 50.000 | 21.41 | 0.00 | 0.00 | 2.83 |
102 | 103 | 1.628846 | ACTAGAACTGGCCGGAAACAT | 59.371 | 47.619 | 21.41 | 1.53 | 0.00 | 2.71 |
103 | 104 | 2.835764 | ACTAGAACTGGCCGGAAACATA | 59.164 | 45.455 | 21.41 | 2.71 | 0.00 | 2.29 |
104 | 105 | 2.871096 | AGAACTGGCCGGAAACATAA | 57.129 | 45.000 | 21.41 | 0.00 | 0.00 | 1.90 |
105 | 106 | 2.433436 | AGAACTGGCCGGAAACATAAC | 58.567 | 47.619 | 21.41 | 0.07 | 0.00 | 1.89 |
106 | 107 | 1.471287 | GAACTGGCCGGAAACATAACC | 59.529 | 52.381 | 21.41 | 0.00 | 0.00 | 2.85 |
107 | 108 | 0.402504 | ACTGGCCGGAAACATAACCA | 59.597 | 50.000 | 21.41 | 0.00 | 0.00 | 3.67 |
108 | 109 | 0.808755 | CTGGCCGGAAACATAACCAC | 59.191 | 55.000 | 5.28 | 0.00 | 0.00 | 4.16 |
109 | 110 | 0.402504 | TGGCCGGAAACATAACCACT | 59.597 | 50.000 | 5.05 | 0.00 | 0.00 | 4.00 |
110 | 111 | 0.808755 | GGCCGGAAACATAACCACTG | 59.191 | 55.000 | 5.05 | 0.00 | 0.00 | 3.66 |
111 | 112 | 1.612199 | GGCCGGAAACATAACCACTGA | 60.612 | 52.381 | 5.05 | 0.00 | 0.00 | 3.41 |
112 | 113 | 2.156098 | GCCGGAAACATAACCACTGAA | 58.844 | 47.619 | 5.05 | 0.00 | 0.00 | 3.02 |
113 | 114 | 2.161609 | GCCGGAAACATAACCACTGAAG | 59.838 | 50.000 | 5.05 | 0.00 | 0.00 | 3.02 |
114 | 115 | 3.670625 | CCGGAAACATAACCACTGAAGA | 58.329 | 45.455 | 0.00 | 0.00 | 0.00 | 2.87 |
115 | 116 | 4.069304 | CCGGAAACATAACCACTGAAGAA | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
116 | 117 | 4.700213 | CCGGAAACATAACCACTGAAGAAT | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
117 | 118 | 5.183140 | CCGGAAACATAACCACTGAAGAATT | 59.817 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
118 | 119 | 6.086222 | CGGAAACATAACCACTGAAGAATTG | 58.914 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
119 | 120 | 6.389906 | GGAAACATAACCACTGAAGAATTGG | 58.610 | 40.000 | 0.00 | 0.00 | 34.74 | 3.16 |
120 | 121 | 6.015434 | GGAAACATAACCACTGAAGAATTGGT | 60.015 | 38.462 | 0.00 | 0.00 | 43.41 | 3.67 |
121 | 122 | 6.575162 | AACATAACCACTGAAGAATTGGTC | 57.425 | 37.500 | 0.00 | 0.00 | 40.81 | 4.02 |
122 | 123 | 5.630121 | ACATAACCACTGAAGAATTGGTCA | 58.370 | 37.500 | 0.00 | 0.00 | 40.81 | 4.02 |
123 | 124 | 6.068010 | ACATAACCACTGAAGAATTGGTCAA | 58.932 | 36.000 | 0.00 | 0.00 | 40.81 | 3.18 |
124 | 125 | 6.549364 | ACATAACCACTGAAGAATTGGTCAAA | 59.451 | 34.615 | 0.00 | 0.00 | 40.81 | 2.69 |
125 | 126 | 5.930837 | AACCACTGAAGAATTGGTCAAAA | 57.069 | 34.783 | 0.00 | 0.00 | 40.81 | 2.44 |
126 | 127 | 5.930837 | ACCACTGAAGAATTGGTCAAAAA | 57.069 | 34.783 | 0.00 | 0.00 | 37.23 | 1.94 |
127 | 128 | 5.660460 | ACCACTGAAGAATTGGTCAAAAAC | 58.340 | 37.500 | 0.00 | 0.00 | 37.23 | 2.43 |
151 | 152 | 9.474313 | AACCTAATTACAACCATTATGTGATGT | 57.526 | 29.630 | 0.00 | 0.00 | 33.89 | 3.06 |
152 | 153 | 8.902806 | ACCTAATTACAACCATTATGTGATGTG | 58.097 | 33.333 | 6.77 | 0.00 | 32.39 | 3.21 |
153 | 154 | 7.862372 | CCTAATTACAACCATTATGTGATGTGC | 59.138 | 37.037 | 6.77 | 0.00 | 32.39 | 4.57 |
154 | 155 | 6.772360 | ATTACAACCATTATGTGATGTGCA | 57.228 | 33.333 | 6.77 | 0.00 | 32.39 | 4.57 |
155 | 156 | 6.772360 | TTACAACCATTATGTGATGTGCAT | 57.228 | 33.333 | 0.00 | 0.00 | 32.39 | 3.96 |
156 | 157 | 7.872113 | TTACAACCATTATGTGATGTGCATA | 57.128 | 32.000 | 0.00 | 0.00 | 32.39 | 3.14 |
157 | 158 | 6.381481 | ACAACCATTATGTGATGTGCATAG | 57.619 | 37.500 | 0.00 | 0.00 | 31.44 | 2.23 |
158 | 159 | 5.217393 | CAACCATTATGTGATGTGCATAGC | 58.783 | 41.667 | 0.00 | 0.00 | 31.44 | 2.97 |
159 | 160 | 4.463070 | ACCATTATGTGATGTGCATAGCA | 58.537 | 39.130 | 0.00 | 0.00 | 35.60 | 3.49 |
160 | 161 | 4.888823 | ACCATTATGTGATGTGCATAGCAA | 59.111 | 37.500 | 1.96 | 0.00 | 41.47 | 3.91 |
161 | 162 | 5.360429 | ACCATTATGTGATGTGCATAGCAAA | 59.640 | 36.000 | 1.96 | 0.00 | 41.47 | 3.68 |
162 | 163 | 6.127394 | ACCATTATGTGATGTGCATAGCAAAA | 60.127 | 34.615 | 1.96 | 0.00 | 41.47 | 2.44 |
163 | 164 | 6.757478 | CCATTATGTGATGTGCATAGCAAAAA | 59.243 | 34.615 | 1.96 | 0.00 | 41.47 | 1.94 |
164 | 165 | 7.439955 | CCATTATGTGATGTGCATAGCAAAAAT | 59.560 | 33.333 | 1.96 | 1.10 | 41.47 | 1.82 |
165 | 166 | 7.758613 | TTATGTGATGTGCATAGCAAAAATG | 57.241 | 32.000 | 1.96 | 0.00 | 41.47 | 2.32 |
166 | 167 | 5.388408 | TGTGATGTGCATAGCAAAAATGA | 57.612 | 34.783 | 1.96 | 0.00 | 41.47 | 2.57 |
167 | 168 | 5.968254 | TGTGATGTGCATAGCAAAAATGAT | 58.032 | 33.333 | 1.96 | 0.00 | 41.47 | 2.45 |
168 | 169 | 7.098074 | TGTGATGTGCATAGCAAAAATGATA | 57.902 | 32.000 | 1.96 | 0.00 | 41.47 | 2.15 |
169 | 170 | 7.545489 | TGTGATGTGCATAGCAAAAATGATAA | 58.455 | 30.769 | 1.96 | 0.00 | 41.47 | 1.75 |
170 | 171 | 8.033626 | TGTGATGTGCATAGCAAAAATGATAAA | 58.966 | 29.630 | 1.96 | 0.00 | 41.47 | 1.40 |
171 | 172 | 8.323140 | GTGATGTGCATAGCAAAAATGATAAAC | 58.677 | 33.333 | 1.96 | 0.00 | 41.47 | 2.01 |
172 | 173 | 8.033626 | TGATGTGCATAGCAAAAATGATAAACA | 58.966 | 29.630 | 0.00 | 0.00 | 41.47 | 2.83 |
173 | 174 | 7.579589 | TGTGCATAGCAAAAATGATAAACAC | 57.420 | 32.000 | 0.00 | 0.00 | 41.47 | 3.32 |
174 | 175 | 6.589523 | TGTGCATAGCAAAAATGATAAACACC | 59.410 | 34.615 | 0.00 | 0.00 | 41.47 | 4.16 |
175 | 176 | 5.804473 | TGCATAGCAAAAATGATAAACACCG | 59.196 | 36.000 | 0.00 | 0.00 | 34.76 | 4.94 |
176 | 177 | 6.033341 | GCATAGCAAAAATGATAAACACCGA | 58.967 | 36.000 | 0.00 | 0.00 | 0.00 | 4.69 |
177 | 178 | 6.020678 | GCATAGCAAAAATGATAAACACCGAC | 60.021 | 38.462 | 0.00 | 0.00 | 0.00 | 4.79 |
178 | 179 | 4.805219 | AGCAAAAATGATAAACACCGACC | 58.195 | 39.130 | 0.00 | 0.00 | 0.00 | 4.79 |
179 | 180 | 4.279671 | AGCAAAAATGATAAACACCGACCA | 59.720 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
180 | 181 | 4.985409 | GCAAAAATGATAAACACCGACCAA | 59.015 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
181 | 182 | 5.463724 | GCAAAAATGATAAACACCGACCAAA | 59.536 | 36.000 | 0.00 | 0.00 | 0.00 | 3.28 |
182 | 183 | 6.147000 | GCAAAAATGATAAACACCGACCAAAT | 59.853 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
183 | 184 | 7.329717 | GCAAAAATGATAAACACCGACCAAATA | 59.670 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
184 | 185 | 8.643752 | CAAAAATGATAAACACCGACCAAATAC | 58.356 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
185 | 186 | 6.445357 | AATGATAAACACCGACCAAATACC | 57.555 | 37.500 | 0.00 | 0.00 | 0.00 | 2.73 |
186 | 187 | 3.933955 | TGATAAACACCGACCAAATACCG | 59.066 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
188 | 189 | 0.686224 | AACACCGACCAAATACCGGA | 59.314 | 50.000 | 9.46 | 0.00 | 45.58 | 5.14 |
189 | 190 | 0.906775 | ACACCGACCAAATACCGGAT | 59.093 | 50.000 | 9.46 | 0.00 | 45.58 | 4.18 |
190 | 191 | 1.295792 | CACCGACCAAATACCGGATG | 58.704 | 55.000 | 9.46 | 0.87 | 45.58 | 3.51 |
191 | 192 | 0.463116 | ACCGACCAAATACCGGATGC | 60.463 | 55.000 | 9.46 | 0.00 | 45.58 | 3.91 |
192 | 193 | 0.462937 | CCGACCAAATACCGGATGCA | 60.463 | 55.000 | 9.46 | 0.00 | 45.58 | 3.96 |
193 | 194 | 1.593196 | CGACCAAATACCGGATGCAT | 58.407 | 50.000 | 9.46 | 0.00 | 0.00 | 3.96 |
194 | 195 | 2.549134 | CCGACCAAATACCGGATGCATA | 60.549 | 50.000 | 9.46 | 0.00 | 45.58 | 3.14 |
195 | 196 | 2.478894 | CGACCAAATACCGGATGCATAC | 59.521 | 50.000 | 9.46 | 0.00 | 0.00 | 2.39 |
196 | 197 | 3.472652 | GACCAAATACCGGATGCATACA | 58.527 | 45.455 | 9.46 | 0.00 | 0.00 | 2.29 |
197 | 198 | 3.476552 | ACCAAATACCGGATGCATACAG | 58.523 | 45.455 | 9.46 | 0.00 | 0.00 | 2.74 |
198 | 199 | 3.135712 | ACCAAATACCGGATGCATACAGA | 59.864 | 43.478 | 9.46 | 0.00 | 0.00 | 3.41 |
199 | 200 | 4.202461 | ACCAAATACCGGATGCATACAGAT | 60.202 | 41.667 | 9.46 | 0.00 | 0.00 | 2.90 |
200 | 201 | 4.393062 | CCAAATACCGGATGCATACAGATC | 59.607 | 45.833 | 9.46 | 0.00 | 0.00 | 2.75 |
201 | 202 | 3.895232 | ATACCGGATGCATACAGATCC | 57.105 | 47.619 | 9.46 | 0.09 | 35.65 | 3.36 |
202 | 203 | 1.423584 | ACCGGATGCATACAGATCCA | 58.576 | 50.000 | 9.46 | 0.00 | 38.50 | 3.41 |
203 | 204 | 1.070758 | ACCGGATGCATACAGATCCAC | 59.929 | 52.381 | 9.46 | 0.00 | 38.50 | 4.02 |
204 | 205 | 1.609061 | CCGGATGCATACAGATCCACC | 60.609 | 57.143 | 10.18 | 0.00 | 38.50 | 4.61 |
205 | 206 | 1.070601 | CGGATGCATACAGATCCACCA | 59.929 | 52.381 | 10.18 | 0.00 | 38.50 | 4.17 |
206 | 207 | 2.485302 | CGGATGCATACAGATCCACCAA | 60.485 | 50.000 | 10.18 | 0.00 | 38.50 | 3.67 |
207 | 208 | 3.554934 | GGATGCATACAGATCCACCAAA | 58.445 | 45.455 | 3.28 | 0.00 | 38.46 | 3.28 |
208 | 209 | 3.953612 | GGATGCATACAGATCCACCAAAA | 59.046 | 43.478 | 3.28 | 0.00 | 38.46 | 2.44 |
209 | 210 | 4.037208 | GGATGCATACAGATCCACCAAAAG | 59.963 | 45.833 | 3.28 | 0.00 | 38.46 | 2.27 |
210 | 211 | 4.299586 | TGCATACAGATCCACCAAAAGA | 57.700 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
211 | 212 | 4.858850 | TGCATACAGATCCACCAAAAGAT | 58.141 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
212 | 213 | 6.000246 | TGCATACAGATCCACCAAAAGATA | 58.000 | 37.500 | 0.00 | 0.00 | 0.00 | 1.98 |
213 | 214 | 6.422333 | TGCATACAGATCCACCAAAAGATAA | 58.578 | 36.000 | 0.00 | 0.00 | 0.00 | 1.75 |
214 | 215 | 6.889177 | TGCATACAGATCCACCAAAAGATAAA | 59.111 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
215 | 216 | 7.148086 | TGCATACAGATCCACCAAAAGATAAAC | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
216 | 217 | 7.148086 | GCATACAGATCCACCAAAAGATAAACA | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 2.83 |
217 | 218 | 6.575162 | ACAGATCCACCAAAAGATAAACAC | 57.425 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
218 | 219 | 5.181245 | ACAGATCCACCAAAAGATAAACACG | 59.819 | 40.000 | 0.00 | 0.00 | 0.00 | 4.49 |
219 | 220 | 4.700213 | AGATCCACCAAAAGATAAACACGG | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 4.94 |
220 | 221 | 4.088056 | TCCACCAAAAGATAAACACGGA | 57.912 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
221 | 222 | 3.816523 | TCCACCAAAAGATAAACACGGAC | 59.183 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
222 | 223 | 3.364565 | CCACCAAAAGATAAACACGGACG | 60.365 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
223 | 224 | 2.809696 | ACCAAAAGATAAACACGGACGG | 59.190 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
224 | 225 | 3.068560 | CCAAAAGATAAACACGGACGGA | 58.931 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
225 | 226 | 3.499157 | CCAAAAGATAAACACGGACGGAA | 59.501 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
226 | 227 | 4.155280 | CCAAAAGATAAACACGGACGGAAT | 59.845 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
227 | 228 | 5.321516 | CAAAAGATAAACACGGACGGAATC | 58.678 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
228 | 229 | 3.175109 | AGATAAACACGGACGGAATCC | 57.825 | 47.619 | 0.00 | 0.00 | 45.20 | 3.01 |
229 | 230 | 2.764572 | AGATAAACACGGACGGAATCCT | 59.235 | 45.455 | 0.00 | 0.00 | 46.69 | 3.24 |
230 | 231 | 2.373540 | TAAACACGGACGGAATCCTG | 57.626 | 50.000 | 0.00 | 0.00 | 46.69 | 3.86 |
231 | 232 | 0.395312 | AAACACGGACGGAATCCTGT | 59.605 | 50.000 | 0.00 | 0.00 | 46.69 | 4.00 |
232 | 233 | 0.320421 | AACACGGACGGAATCCTGTG | 60.320 | 55.000 | 13.00 | 13.00 | 46.69 | 3.66 |
233 | 234 | 1.183030 | ACACGGACGGAATCCTGTGA | 61.183 | 55.000 | 18.33 | 0.00 | 46.40 | 3.58 |
234 | 235 | 0.458543 | CACGGACGGAATCCTGTGAG | 60.459 | 60.000 | 0.00 | 0.00 | 46.40 | 3.51 |
235 | 236 | 0.611062 | ACGGACGGAATCCTGTGAGA | 60.611 | 55.000 | 0.00 | 0.00 | 46.69 | 3.27 |
236 | 237 | 0.747255 | CGGACGGAATCCTGTGAGAT | 59.253 | 55.000 | 0.00 | 0.00 | 46.69 | 2.75 |
237 | 238 | 1.269309 | CGGACGGAATCCTGTGAGATC | 60.269 | 57.143 | 0.00 | 0.00 | 46.69 | 2.75 |
238 | 239 | 1.269309 | GGACGGAATCCTGTGAGATCG | 60.269 | 57.143 | 0.00 | 0.00 | 45.22 | 3.69 |
239 | 240 | 0.103208 | ACGGAATCCTGTGAGATCGC | 59.897 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
240 | 241 | 0.387202 | CGGAATCCTGTGAGATCGCT | 59.613 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
241 | 242 | 1.863267 | GGAATCCTGTGAGATCGCTG | 58.137 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
242 | 243 | 1.539929 | GGAATCCTGTGAGATCGCTGG | 60.540 | 57.143 | 11.82 | 11.82 | 43.93 | 4.85 |
244 | 245 | 2.498077 | TCCTGTGAGATCGCTGGAG | 58.502 | 57.895 | 15.55 | 0.00 | 45.45 | 3.86 |
245 | 246 | 0.034089 | TCCTGTGAGATCGCTGGAGA | 60.034 | 55.000 | 15.55 | 0.00 | 45.45 | 3.71 |
246 | 247 | 0.102120 | CCTGTGAGATCGCTGGAGAC | 59.898 | 60.000 | 12.51 | 0.00 | 44.93 | 3.36 |
247 | 248 | 0.813821 | CTGTGAGATCGCTGGAGACA | 59.186 | 55.000 | 0.00 | 0.00 | 39.59 | 3.41 |
248 | 249 | 0.528017 | TGTGAGATCGCTGGAGACAC | 59.472 | 55.000 | 0.00 | 0.00 | 35.60 | 3.67 |
249 | 250 | 0.528017 | GTGAGATCGCTGGAGACACA | 59.472 | 55.000 | 0.00 | 0.00 | 35.60 | 3.72 |
250 | 251 | 0.528017 | TGAGATCGCTGGAGACACAC | 59.472 | 55.000 | 0.00 | 0.00 | 35.60 | 3.82 |
251 | 252 | 0.179124 | GAGATCGCTGGAGACACACC | 60.179 | 60.000 | 0.00 | 0.00 | 35.60 | 4.16 |
252 | 253 | 0.613292 | AGATCGCTGGAGACACACCT | 60.613 | 55.000 | 0.00 | 0.00 | 35.60 | 4.00 |
253 | 254 | 0.179124 | GATCGCTGGAGACACACCTC | 60.179 | 60.000 | 0.00 | 0.00 | 35.60 | 3.85 |
260 | 261 | 2.846371 | GAGACACACCTCCACATGC | 58.154 | 57.895 | 0.00 | 0.00 | 0.00 | 4.06 |
261 | 262 | 0.674895 | GAGACACACCTCCACATGCC | 60.675 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
262 | 263 | 1.675641 | GACACACCTCCACATGCCC | 60.676 | 63.158 | 0.00 | 0.00 | 0.00 | 5.36 |
263 | 264 | 2.129555 | GACACACCTCCACATGCCCT | 62.130 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
264 | 265 | 1.377725 | CACACCTCCACATGCCCTC | 60.378 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
265 | 266 | 2.273449 | CACCTCCACATGCCCTCC | 59.727 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
266 | 267 | 2.204136 | ACCTCCACATGCCCTCCA | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
267 | 268 | 1.852157 | ACCTCCACATGCCCTCCAA | 60.852 | 57.895 | 0.00 | 0.00 | 0.00 | 3.53 |
268 | 269 | 1.379044 | CCTCCACATGCCCTCCAAC | 60.379 | 63.158 | 0.00 | 0.00 | 0.00 | 3.77 |
269 | 270 | 1.746615 | CTCCACATGCCCTCCAACG | 60.747 | 63.158 | 0.00 | 0.00 | 0.00 | 4.10 |
270 | 271 | 2.184020 | CTCCACATGCCCTCCAACGA | 62.184 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
271 | 272 | 1.077501 | CCACATGCCCTCCAACGAT | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 3.73 |
272 | 273 | 1.378882 | CCACATGCCCTCCAACGATG | 61.379 | 60.000 | 0.00 | 0.00 | 0.00 | 3.84 |
273 | 274 | 0.677731 | CACATGCCCTCCAACGATGT | 60.678 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
274 | 275 | 0.038166 | ACATGCCCTCCAACGATGTT | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
275 | 276 | 1.280710 | ACATGCCCTCCAACGATGTTA | 59.719 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
276 | 277 | 2.290641 | ACATGCCCTCCAACGATGTTAA | 60.291 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
277 | 278 | 2.570415 | TGCCCTCCAACGATGTTAAA | 57.430 | 45.000 | 0.00 | 0.00 | 0.00 | 1.52 |
278 | 279 | 2.156098 | TGCCCTCCAACGATGTTAAAC | 58.844 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
279 | 280 | 1.471287 | GCCCTCCAACGATGTTAAACC | 59.529 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
280 | 281 | 2.878526 | GCCCTCCAACGATGTTAAACCT | 60.879 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
281 | 282 | 3.620472 | GCCCTCCAACGATGTTAAACCTA | 60.620 | 47.826 | 0.00 | 0.00 | 0.00 | 3.08 |
282 | 283 | 4.777463 | CCCTCCAACGATGTTAAACCTAT | 58.223 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
283 | 284 | 4.814771 | CCCTCCAACGATGTTAAACCTATC | 59.185 | 45.833 | 0.00 | 0.00 | 0.00 | 2.08 |
284 | 285 | 5.424757 | CCTCCAACGATGTTAAACCTATCA | 58.575 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
285 | 286 | 5.293569 | CCTCCAACGATGTTAAACCTATCAC | 59.706 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
286 | 287 | 5.180271 | TCCAACGATGTTAAACCTATCACC | 58.820 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
287 | 288 | 4.033587 | CCAACGATGTTAAACCTATCACCG | 59.966 | 45.833 | 0.00 | 0.00 | 0.00 | 4.94 |
288 | 289 | 3.788937 | ACGATGTTAAACCTATCACCGG | 58.211 | 45.455 | 0.00 | 0.00 | 0.00 | 5.28 |
289 | 290 | 3.128349 | CGATGTTAAACCTATCACCGGG | 58.872 | 50.000 | 6.32 | 0.00 | 0.00 | 5.73 |
290 | 291 | 3.181473 | CGATGTTAAACCTATCACCGGGA | 60.181 | 47.826 | 6.32 | 0.00 | 0.00 | 5.14 |
291 | 292 | 4.502604 | CGATGTTAAACCTATCACCGGGAT | 60.503 | 45.833 | 6.32 | 8.59 | 40.14 | 3.85 |
292 | 293 | 4.145365 | TGTTAAACCTATCACCGGGATG | 57.855 | 45.455 | 6.32 | 0.00 | 36.72 | 3.51 |
293 | 294 | 3.118186 | TGTTAAACCTATCACCGGGATGG | 60.118 | 47.826 | 6.32 | 7.84 | 46.41 | 3.51 |
295 | 296 | 2.750350 | CCTATCACCGGGATGGGC | 59.250 | 66.667 | 17.97 | 0.00 | 46.17 | 5.36 |
296 | 297 | 1.843376 | CCTATCACCGGGATGGGCT | 60.843 | 63.158 | 17.97 | 0.00 | 46.17 | 5.19 |
297 | 298 | 1.372683 | CTATCACCGGGATGGGCTG | 59.627 | 63.158 | 6.32 | 0.00 | 44.64 | 4.85 |
298 | 299 | 2.116983 | CTATCACCGGGATGGGCTGG | 62.117 | 65.000 | 6.32 | 0.00 | 44.64 | 4.85 |
305 | 306 | 3.743017 | GGATGGGCTGGGCAGGAA | 61.743 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
306 | 307 | 2.123982 | GATGGGCTGGGCAGGAAG | 60.124 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
307 | 308 | 2.614969 | ATGGGCTGGGCAGGAAGA | 60.615 | 61.111 | 0.00 | 0.00 | 0.00 | 2.87 |
308 | 309 | 2.215451 | GATGGGCTGGGCAGGAAGAA | 62.215 | 60.000 | 0.00 | 0.00 | 0.00 | 2.52 |
309 | 310 | 2.361737 | GGGCTGGGCAGGAAGAAC | 60.362 | 66.667 | 0.00 | 0.00 | 0.00 | 3.01 |
310 | 311 | 2.361737 | GGCTGGGCAGGAAGAACC | 60.362 | 66.667 | 0.00 | 0.00 | 39.35 | 3.62 |
324 | 325 | 5.422214 | GGAAGAACCTTACTCCATCTTCA | 57.578 | 43.478 | 13.81 | 0.00 | 44.86 | 3.02 |
325 | 326 | 5.995446 | GGAAGAACCTTACTCCATCTTCAT | 58.005 | 41.667 | 13.81 | 0.00 | 44.86 | 2.57 |
326 | 327 | 7.125792 | GGAAGAACCTTACTCCATCTTCATA | 57.874 | 40.000 | 13.81 | 0.00 | 44.86 | 2.15 |
327 | 328 | 7.213678 | GGAAGAACCTTACTCCATCTTCATAG | 58.786 | 42.308 | 13.81 | 0.00 | 44.86 | 2.23 |
328 | 329 | 7.070074 | GGAAGAACCTTACTCCATCTTCATAGA | 59.930 | 40.741 | 13.81 | 0.00 | 44.86 | 1.98 |
329 | 330 | 7.595819 | AGAACCTTACTCCATCTTCATAGAG | 57.404 | 40.000 | 0.00 | 0.00 | 32.92 | 2.43 |
330 | 331 | 5.799827 | ACCTTACTCCATCTTCATAGAGC | 57.200 | 43.478 | 0.00 | 0.00 | 32.92 | 4.09 |
331 | 332 | 4.591072 | ACCTTACTCCATCTTCATAGAGCC | 59.409 | 45.833 | 0.00 | 0.00 | 32.92 | 4.70 |
332 | 333 | 4.590647 | CCTTACTCCATCTTCATAGAGCCA | 59.409 | 45.833 | 0.00 | 0.00 | 32.92 | 4.75 |
333 | 334 | 5.510520 | CCTTACTCCATCTTCATAGAGCCAC | 60.511 | 48.000 | 0.00 | 0.00 | 32.92 | 5.01 |
334 | 335 | 2.703007 | ACTCCATCTTCATAGAGCCACC | 59.297 | 50.000 | 0.00 | 0.00 | 32.92 | 4.61 |
335 | 336 | 2.702478 | CTCCATCTTCATAGAGCCACCA | 59.298 | 50.000 | 0.00 | 0.00 | 32.92 | 4.17 |
336 | 337 | 2.435805 | TCCATCTTCATAGAGCCACCAC | 59.564 | 50.000 | 0.00 | 0.00 | 32.92 | 4.16 |
337 | 338 | 2.486191 | CCATCTTCATAGAGCCACCACC | 60.486 | 54.545 | 0.00 | 0.00 | 32.92 | 4.61 |
338 | 339 | 0.824109 | TCTTCATAGAGCCACCACCG | 59.176 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
339 | 340 | 0.811616 | CTTCATAGAGCCACCACCGC | 60.812 | 60.000 | 0.00 | 0.00 | 0.00 | 5.68 |
340 | 341 | 2.203070 | CATAGAGCCACCACCGCC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
341 | 342 | 2.365635 | ATAGAGCCACCACCGCCT | 60.366 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
342 | 343 | 2.435693 | ATAGAGCCACCACCGCCTC | 61.436 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
353 | 354 | 4.521062 | CCGCCTCGCCTTCCTGAG | 62.521 | 72.222 | 0.00 | 0.00 | 0.00 | 3.35 |
355 | 356 | 4.087892 | GCCTCGCCTTCCTGAGCA | 62.088 | 66.667 | 0.00 | 0.00 | 0.00 | 4.26 |
356 | 357 | 2.906458 | CCTCGCCTTCCTGAGCAT | 59.094 | 61.111 | 0.00 | 0.00 | 0.00 | 3.79 |
357 | 358 | 1.523258 | CCTCGCCTTCCTGAGCATG | 60.523 | 63.158 | 0.00 | 0.00 | 0.00 | 4.06 |
358 | 359 | 1.519246 | CTCGCCTTCCTGAGCATGA | 59.481 | 57.895 | 0.00 | 0.00 | 0.00 | 3.07 |
359 | 360 | 0.809241 | CTCGCCTTCCTGAGCATGAC | 60.809 | 60.000 | 0.00 | 0.00 | 0.00 | 3.06 |
360 | 361 | 1.078918 | CGCCTTCCTGAGCATGACA | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 3.58 |
361 | 362 | 0.674581 | CGCCTTCCTGAGCATGACAA | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
362 | 363 | 1.093159 | GCCTTCCTGAGCATGACAAG | 58.907 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
363 | 364 | 1.612726 | GCCTTCCTGAGCATGACAAGT | 60.613 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
364 | 365 | 2.787994 | CCTTCCTGAGCATGACAAGTT | 58.212 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
365 | 366 | 3.152341 | CCTTCCTGAGCATGACAAGTTT | 58.848 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
366 | 367 | 3.190118 | CCTTCCTGAGCATGACAAGTTTC | 59.810 | 47.826 | 0.00 | 0.00 | 0.00 | 2.78 |
367 | 368 | 2.783135 | TCCTGAGCATGACAAGTTTCC | 58.217 | 47.619 | 0.00 | 0.00 | 0.00 | 3.13 |
368 | 369 | 2.373169 | TCCTGAGCATGACAAGTTTCCT | 59.627 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
369 | 370 | 3.582647 | TCCTGAGCATGACAAGTTTCCTA | 59.417 | 43.478 | 0.00 | 0.00 | 0.00 | 2.94 |
370 | 371 | 4.041567 | TCCTGAGCATGACAAGTTTCCTAA | 59.958 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
371 | 372 | 4.394300 | CCTGAGCATGACAAGTTTCCTAAG | 59.606 | 45.833 | 0.00 | 0.00 | 0.00 | 2.18 |
372 | 373 | 3.753272 | TGAGCATGACAAGTTTCCTAAGC | 59.247 | 43.478 | 0.00 | 0.00 | 0.00 | 3.09 |
373 | 374 | 3.753272 | GAGCATGACAAGTTTCCTAAGCA | 59.247 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
374 | 375 | 4.144297 | AGCATGACAAGTTTCCTAAGCAA | 58.856 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
375 | 376 | 4.584325 | AGCATGACAAGTTTCCTAAGCAAA | 59.416 | 37.500 | 0.00 | 0.00 | 0.00 | 3.68 |
376 | 377 | 4.681483 | GCATGACAAGTTTCCTAAGCAAAC | 59.319 | 41.667 | 0.00 | 0.00 | 34.47 | 2.93 |
377 | 378 | 5.507985 | GCATGACAAGTTTCCTAAGCAAACT | 60.508 | 40.000 | 0.00 | 0.00 | 44.34 | 2.66 |
378 | 379 | 6.293955 | GCATGACAAGTTTCCTAAGCAAACTA | 60.294 | 38.462 | 0.00 | 0.00 | 42.14 | 2.24 |
379 | 380 | 7.648142 | CATGACAAGTTTCCTAAGCAAACTAA | 58.352 | 34.615 | 0.08 | 0.00 | 42.14 | 2.24 |
380 | 381 | 7.633193 | TGACAAGTTTCCTAAGCAAACTAAA | 57.367 | 32.000 | 0.08 | 0.00 | 42.14 | 1.85 |
381 | 382 | 8.057536 | TGACAAGTTTCCTAAGCAAACTAAAA | 57.942 | 30.769 | 0.08 | 0.00 | 42.14 | 1.52 |
382 | 383 | 8.524487 | TGACAAGTTTCCTAAGCAAACTAAAAA | 58.476 | 29.630 | 0.08 | 0.00 | 42.14 | 1.94 |
469 | 472 | 8.559536 | GCACATAGCTTACACACATGTATAATT | 58.440 | 33.333 | 0.00 | 0.00 | 41.02 | 1.40 |
495 | 498 | 4.123497 | TGCAAGTACTAGTGCATCGATT | 57.877 | 40.909 | 16.49 | 0.00 | 45.52 | 3.34 |
507 | 510 | 8.589338 | ACTAGTGCATCGATTTTAGGATCTTAT | 58.411 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
515 | 518 | 9.950496 | ATCGATTTTAGGATCTTATTACATGCT | 57.050 | 29.630 | 0.00 | 0.00 | 0.00 | 3.79 |
567 | 570 | 8.604640 | TCTTTTATCTGAGATGATTGATGCTC | 57.395 | 34.615 | 4.96 | 0.00 | 0.00 | 4.26 |
577 | 580 | 6.770542 | AGATGATTGATGCTCATGTCTGTAT | 58.229 | 36.000 | 0.00 | 0.00 | 33.56 | 2.29 |
595 | 598 | 9.811995 | TGTCTGTATAAAGTATAACAAATCGCT | 57.188 | 29.630 | 0.00 | 0.00 | 0.00 | 4.93 |
612 | 615 | 1.127397 | CGCTACATGACACACTGCTTG | 59.873 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
617 | 620 | 0.603707 | ATGACACACTGCTTGGACGG | 60.604 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
628 | 631 | 1.077787 | TTGGACGGATGATGGTGGC | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 5.01 |
630 | 633 | 2.589540 | GACGGATGATGGTGGCCA | 59.410 | 61.111 | 0.00 | 0.00 | 38.19 | 5.36 |
634 | 637 | 0.108396 | CGGATGATGGTGGCCATGTA | 59.892 | 55.000 | 9.72 | 0.00 | 45.26 | 2.29 |
638 | 641 | 3.256631 | GGATGATGGTGGCCATGTATTTC | 59.743 | 47.826 | 9.72 | 2.72 | 45.26 | 2.17 |
640 | 643 | 1.608590 | GATGGTGGCCATGTATTTCGG | 59.391 | 52.381 | 9.72 | 0.00 | 45.26 | 4.30 |
644 | 647 | 2.232696 | GGTGGCCATGTATTTCGGTTTT | 59.767 | 45.455 | 9.72 | 0.00 | 0.00 | 2.43 |
647 | 650 | 2.494073 | GGCCATGTATTTCGGTTTTCCA | 59.506 | 45.455 | 0.00 | 0.00 | 40.70 | 3.53 |
672 | 675 | 2.848691 | ACCGAACAAACCAAACCGATA | 58.151 | 42.857 | 0.00 | 0.00 | 0.00 | 2.92 |
673 | 676 | 3.414269 | ACCGAACAAACCAAACCGATAT | 58.586 | 40.909 | 0.00 | 0.00 | 0.00 | 1.63 |
674 | 677 | 3.822167 | ACCGAACAAACCAAACCGATATT | 59.178 | 39.130 | 0.00 | 0.00 | 0.00 | 1.28 |
701 | 704 | 5.957842 | TGTTAATAAGGTTCAGTGGCAAG | 57.042 | 39.130 | 0.00 | 0.00 | 0.00 | 4.01 |
709 | 712 | 5.200368 | AGGTTCAGTGGCAAGTTTTATTG | 57.800 | 39.130 | 0.00 | 0.00 | 0.00 | 1.90 |
714 | 717 | 6.403866 | TCAGTGGCAAGTTTTATTGTGATT | 57.596 | 33.333 | 0.00 | 0.00 | 32.56 | 2.57 |
720 | 723 | 9.202273 | GTGGCAAGTTTTATTGTGATTATTTCA | 57.798 | 29.630 | 0.00 | 0.00 | 32.56 | 2.69 |
757 | 760 | 6.046593 | CAGGAAACAAAACTCTAAAAACCCC | 58.953 | 40.000 | 0.00 | 0.00 | 0.00 | 4.95 |
762 | 765 | 9.602568 | GAAACAAAACTCTAAAAACCCCAATAA | 57.397 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
777 | 780 | 4.573201 | CCCCAATAAGACGAAGCGAATTAA | 59.427 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
784 | 787 | 9.701098 | AATAAGACGAAGCGAATTAACCATATA | 57.299 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
796 | 799 | 7.641020 | CGAATTAACCATATAAACCGAACAACC | 59.359 | 37.037 | 0.00 | 0.00 | 0.00 | 3.77 |
797 | 800 | 7.941431 | ATTAACCATATAAACCGAACAACCA | 57.059 | 32.000 | 0.00 | 0.00 | 0.00 | 3.67 |
798 | 801 | 5.632244 | AACCATATAAACCGAACAACCAC | 57.368 | 39.130 | 0.00 | 0.00 | 0.00 | 4.16 |
799 | 802 | 4.913784 | ACCATATAAACCGAACAACCACT | 58.086 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
801 | 804 | 5.413523 | ACCATATAAACCGAACAACCACTTC | 59.586 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
805 | 808 | 1.675552 | ACCGAACAACCACTTCCTTG | 58.324 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
808 | 811 | 1.676006 | CGAACAACCACTTCCTTGCTT | 59.324 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
844 | 853 | 4.128643 | CAATGTGGAGTTGGTTGCAAAAT | 58.871 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
850 | 859 | 4.344679 | TGGAGTTGGTTGCAAAATGAGAAT | 59.655 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
861 | 871 | 4.210331 | CAAAATGAGAATTCCCGAGGGAT | 58.790 | 43.478 | 12.27 | 0.00 | 44.74 | 3.85 |
907 | 932 | 6.436843 | AATAAATAGCCGTCAAACCTTCTG | 57.563 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
922 | 954 | 2.528564 | CTTCTGCCTTTTTCCATCCCA | 58.471 | 47.619 | 0.00 | 0.00 | 0.00 | 4.37 |
1238 | 1508 | 1.555075 | CACCATTCCTTCTCCTCCGAA | 59.445 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
1340 | 1964 | 2.668212 | CAGAAAGGCGCGGGTGAA | 60.668 | 61.111 | 8.83 | 0.00 | 0.00 | 3.18 |
1617 | 2265 | 1.595929 | GAACAGGCGACGGGAACAA | 60.596 | 57.895 | 0.00 | 0.00 | 0.00 | 2.83 |
1713 | 2569 | 1.270907 | TGGAGTTCTTGGAGCCTCTC | 58.729 | 55.000 | 0.00 | 0.00 | 0.00 | 3.20 |
2246 | 3330 | 5.245531 | AGTTTATCTGAATGTTTGCTCGGA | 58.754 | 37.500 | 0.00 | 0.00 | 0.00 | 4.55 |
2389 | 4226 | 4.985538 | TCAATCTTGTTAGCCCTTTCACT | 58.014 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
2541 | 4427 | 3.056107 | TCGAGTCAAGAACAAGGTATGGG | 60.056 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
2589 | 4483 | 3.587061 | TGTGATTCTTGGGTGGTATGACT | 59.413 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
2703 | 5582 | 5.068234 | TCTTGGACCTGTTAGTGTAATCG | 57.932 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
2746 | 5712 | 6.592870 | AGTATAGGAGTAATCTTGGGCAAAC | 58.407 | 40.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2965 | 6620 | 3.755378 | AGTTCAAGGCTGCATAACTGAAG | 59.245 | 43.478 | 0.50 | 0.00 | 0.00 | 3.02 |
3022 | 6680 | 0.385751 | TCGGCGATCACTTCAGGATC | 59.614 | 55.000 | 4.99 | 0.00 | 38.20 | 3.36 |
3224 | 6899 | 8.178964 | TGTTAATTCCATTCGTTTTCTATTCCG | 58.821 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
3227 | 6902 | 5.789710 | TCCATTCGTTTTCTATTCCGTTC | 57.210 | 39.130 | 0.00 | 0.00 | 0.00 | 3.95 |
3569 | 7714 | 3.074390 | TCTTGGTTGTGATTGATGGGACT | 59.926 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
3591 | 7742 | 7.061557 | GGACTTGAATCGTACTTGTACTGTTAC | 59.938 | 40.741 | 8.94 | 0.00 | 0.00 | 2.50 |
3719 | 8164 | 8.359642 | CAGAGAACATGGAAACCTGAAAATTTA | 58.640 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3720 | 8165 | 9.093458 | AGAGAACATGGAAACCTGAAAATTTAT | 57.907 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
3723 | 8169 | 8.620116 | AACATGGAAACCTGAAAATTTATTGG | 57.380 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
4423 | 8973 | 3.568093 | CTTGCAAAGGAACAACGGG | 57.432 | 52.632 | 0.00 | 0.00 | 41.27 | 5.28 |
4425 | 8975 | 1.613437 | CTTGCAAAGGAACAACGGGAT | 59.387 | 47.619 | 0.00 | 0.00 | 41.27 | 3.85 |
4443 | 8993 | 7.079451 | ACGGGATTATAATGAGGAAATGACT | 57.921 | 36.000 | 1.78 | 0.00 | 0.00 | 3.41 |
4798 | 9411 | 8.078596 | GGTTTTCTGCAATTCCATCATAGTATC | 58.921 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
4804 | 9418 | 5.292101 | GCAATTCCATCATAGTATCGTAGCC | 59.708 | 44.000 | 0.00 | 0.00 | 0.00 | 3.93 |
4807 | 9421 | 5.644977 | TCCATCATAGTATCGTAGCCAAG | 57.355 | 43.478 | 0.00 | 0.00 | 0.00 | 3.61 |
4820 | 9434 | 1.471119 | AGCCAAGTGCATTCCATCTG | 58.529 | 50.000 | 0.00 | 0.00 | 44.83 | 2.90 |
4998 | 9618 | 7.391554 | TGGTTAGTCTTCATTTTCCTCAGATTG | 59.608 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
5072 | 9701 | 3.274288 | CAGGGCTCAGAGGAAATTACAC | 58.726 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
5113 | 9751 | 7.545965 | GTGATTCATATCCTCCCTTACATTACG | 59.454 | 40.741 | 0.00 | 0.00 | 0.00 | 3.18 |
5745 | 10886 | 8.004215 | TCCTTCATTGTTGGCTGGTATATAATT | 58.996 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
6037 | 11220 | 6.069684 | AGCTTCTGTTTCTGATTCTTTGTG | 57.930 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
6115 | 11298 | 4.895668 | TTACTTATATTACCCCGCCTGG | 57.104 | 45.455 | 0.00 | 0.00 | 0.00 | 4.45 |
6116 | 11299 | 2.697967 | ACTTATATTACCCCGCCTGGT | 58.302 | 47.619 | 0.00 | 0.00 | 42.62 | 4.00 |
6117 | 11300 | 3.860607 | ACTTATATTACCCCGCCTGGTA | 58.139 | 45.455 | 0.00 | 0.00 | 39.91 | 3.25 |
6118 | 11301 | 3.580022 | ACTTATATTACCCCGCCTGGTAC | 59.420 | 47.826 | 0.00 | 0.00 | 40.55 | 3.34 |
6119 | 11302 | 2.410790 | ATATTACCCCGCCTGGTACT | 57.589 | 50.000 | 0.00 | 0.00 | 40.55 | 2.73 |
6120 | 11303 | 3.548162 | ATATTACCCCGCCTGGTACTA | 57.452 | 47.619 | 0.00 | 0.00 | 40.55 | 1.82 |
6121 | 11304 | 1.417288 | ATTACCCCGCCTGGTACTAC | 58.583 | 55.000 | 0.00 | 0.00 | 40.55 | 2.73 |
6122 | 11305 | 0.336048 | TTACCCCGCCTGGTACTACT | 59.664 | 55.000 | 0.00 | 0.00 | 40.55 | 2.57 |
6123 | 11306 | 0.336048 | TACCCCGCCTGGTACTACTT | 59.664 | 55.000 | 0.00 | 0.00 | 39.91 | 2.24 |
6124 | 11307 | 0.546027 | ACCCCGCCTGGTACTACTTT | 60.546 | 55.000 | 0.00 | 0.00 | 36.67 | 2.66 |
6125 | 11308 | 0.107848 | CCCCGCCTGGTACTACTTTG | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 2.77 |
6126 | 11309 | 0.899720 | CCCGCCTGGTACTACTTTGA | 59.100 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
6127 | 11310 | 1.276989 | CCCGCCTGGTACTACTTTGAA | 59.723 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
6128 | 11311 | 2.618053 | CCGCCTGGTACTACTTTGAAG | 58.382 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
6129 | 11312 | 2.000447 | CGCCTGGTACTACTTTGAAGC | 59.000 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
6130 | 11313 | 2.353803 | CGCCTGGTACTACTTTGAAGCT | 60.354 | 50.000 | 0.00 | 0.00 | 0.00 | 3.74 |
6131 | 11314 | 3.003480 | GCCTGGTACTACTTTGAAGCTG | 58.997 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
6132 | 11315 | 3.557264 | GCCTGGTACTACTTTGAAGCTGT | 60.557 | 47.826 | 0.00 | 0.00 | 0.00 | 4.40 |
6133 | 11316 | 4.642429 | CCTGGTACTACTTTGAAGCTGTT | 58.358 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
6134 | 11317 | 5.063880 | CCTGGTACTACTTTGAAGCTGTTT | 58.936 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
6135 | 11318 | 6.228258 | CCTGGTACTACTTTGAAGCTGTTTA | 58.772 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
6136 | 11319 | 6.708949 | CCTGGTACTACTTTGAAGCTGTTTAA | 59.291 | 38.462 | 0.00 | 0.00 | 0.00 | 1.52 |
6137 | 11320 | 7.307811 | CCTGGTACTACTTTGAAGCTGTTTAAC | 60.308 | 40.741 | 0.00 | 0.00 | 0.00 | 2.01 |
6147 | 11330 | 5.373222 | TGAAGCTGTTTAACCTTCTGCTTA | 58.627 | 37.500 | 12.71 | 0.00 | 42.89 | 3.09 |
6172 | 11355 | 4.989279 | AGCTGTTTGAATCACAACAACT | 57.011 | 36.364 | 10.48 | 9.08 | 38.29 | 3.16 |
6198 | 11381 | 4.935808 | GCTGGTACTACTTTGCAATGTACT | 59.064 | 41.667 | 18.39 | 13.16 | 35.29 | 2.73 |
6199 | 11382 | 5.163854 | GCTGGTACTACTTTGCAATGTACTG | 60.164 | 44.000 | 18.39 | 13.33 | 35.29 | 2.74 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 5.779922 | AGTCGATACTTTGCTTGAGTAACA | 58.220 | 37.500 | 0.00 | 0.00 | 33.66 | 2.41 |
1 | 2 | 6.365247 | TCAAGTCGATACTTTGCTTGAGTAAC | 59.635 | 38.462 | 7.95 | 0.00 | 43.60 | 2.50 |
2 | 3 | 6.452242 | TCAAGTCGATACTTTGCTTGAGTAA | 58.548 | 36.000 | 7.95 | 0.00 | 43.60 | 2.24 |
4 | 5 | 4.883083 | TCAAGTCGATACTTTGCTTGAGT | 58.117 | 39.130 | 7.95 | 0.00 | 43.60 | 3.41 |
6 | 7 | 5.134202 | TCTCAAGTCGATACTTTGCTTGA | 57.866 | 39.130 | 10.73 | 10.73 | 43.60 | 3.02 |
7 | 8 | 5.845985 | TTCTCAAGTCGATACTTTGCTTG | 57.154 | 39.130 | 3.90 | 3.90 | 43.60 | 4.01 |
8 | 9 | 6.535508 | GGTATTCTCAAGTCGATACTTTGCTT | 59.464 | 38.462 | 0.00 | 0.00 | 43.60 | 3.91 |
9 | 10 | 6.043411 | GGTATTCTCAAGTCGATACTTTGCT | 58.957 | 40.000 | 0.00 | 0.00 | 43.60 | 3.91 |
10 | 11 | 5.810587 | TGGTATTCTCAAGTCGATACTTTGC | 59.189 | 40.000 | 0.00 | 0.00 | 43.60 | 3.68 |
11 | 12 | 7.545965 | AGTTGGTATTCTCAAGTCGATACTTTG | 59.454 | 37.037 | 0.00 | 0.00 | 43.60 | 2.77 |
12 | 13 | 7.612677 | AGTTGGTATTCTCAAGTCGATACTTT | 58.387 | 34.615 | 0.00 | 0.00 | 43.60 | 2.66 |
14 | 15 | 6.777213 | AGTTGGTATTCTCAAGTCGATACT | 57.223 | 37.500 | 0.00 | 0.00 | 37.65 | 2.12 |
15 | 16 | 6.196724 | CGAAGTTGGTATTCTCAAGTCGATAC | 59.803 | 42.308 | 0.00 | 0.00 | 36.10 | 2.24 |
16 | 17 | 6.263344 | CGAAGTTGGTATTCTCAAGTCGATA | 58.737 | 40.000 | 0.00 | 0.00 | 36.10 | 2.92 |
17 | 18 | 5.103000 | CGAAGTTGGTATTCTCAAGTCGAT | 58.897 | 41.667 | 0.00 | 0.00 | 36.10 | 3.59 |
18 | 19 | 4.482386 | CGAAGTTGGTATTCTCAAGTCGA | 58.518 | 43.478 | 0.00 | 0.00 | 36.10 | 4.20 |
19 | 20 | 3.060895 | GCGAAGTTGGTATTCTCAAGTCG | 59.939 | 47.826 | 0.00 | 0.00 | 36.62 | 4.18 |
20 | 21 | 3.994392 | TGCGAAGTTGGTATTCTCAAGTC | 59.006 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
21 | 22 | 4.002906 | TGCGAAGTTGGTATTCTCAAGT | 57.997 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
22 | 23 | 4.393062 | ACATGCGAAGTTGGTATTCTCAAG | 59.607 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
23 | 24 | 4.323417 | ACATGCGAAGTTGGTATTCTCAA | 58.677 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
24 | 25 | 3.937814 | ACATGCGAAGTTGGTATTCTCA | 58.062 | 40.909 | 0.00 | 0.00 | 0.00 | 3.27 |
25 | 26 | 6.417191 | TTTACATGCGAAGTTGGTATTCTC | 57.583 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
26 | 27 | 7.391148 | AATTTACATGCGAAGTTGGTATTCT | 57.609 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
27 | 28 | 9.006215 | GTAAATTTACATGCGAAGTTGGTATTC | 57.994 | 33.333 | 20.95 | 0.00 | 33.88 | 1.75 |
28 | 29 | 8.736244 | AGTAAATTTACATGCGAAGTTGGTATT | 58.264 | 29.630 | 26.06 | 0.94 | 36.12 | 1.89 |
29 | 30 | 8.276252 | AGTAAATTTACATGCGAAGTTGGTAT | 57.724 | 30.769 | 26.06 | 1.29 | 36.12 | 2.73 |
30 | 31 | 7.675962 | AGTAAATTTACATGCGAAGTTGGTA | 57.324 | 32.000 | 26.06 | 0.00 | 36.12 | 3.25 |
31 | 32 | 6.569179 | AGTAAATTTACATGCGAAGTTGGT | 57.431 | 33.333 | 26.06 | 2.26 | 36.12 | 3.67 |
32 | 33 | 6.307800 | CCAAGTAAATTTACATGCGAAGTTGG | 59.692 | 38.462 | 26.06 | 22.13 | 36.12 | 3.77 |
33 | 34 | 6.183359 | GCCAAGTAAATTTACATGCGAAGTTG | 60.183 | 38.462 | 26.06 | 18.41 | 36.12 | 3.16 |
34 | 35 | 5.861787 | GCCAAGTAAATTTACATGCGAAGTT | 59.138 | 36.000 | 26.06 | 9.54 | 36.12 | 2.66 |
35 | 36 | 5.048364 | TGCCAAGTAAATTTACATGCGAAGT | 60.048 | 36.000 | 26.06 | 4.23 | 36.12 | 3.01 |
36 | 37 | 5.398169 | TGCCAAGTAAATTTACATGCGAAG | 58.602 | 37.500 | 26.06 | 14.33 | 36.12 | 3.79 |
37 | 38 | 5.182190 | TCTGCCAAGTAAATTTACATGCGAA | 59.818 | 36.000 | 26.06 | 13.90 | 36.12 | 4.70 |
38 | 39 | 4.697828 | TCTGCCAAGTAAATTTACATGCGA | 59.302 | 37.500 | 26.06 | 20.40 | 36.12 | 5.10 |
39 | 40 | 4.793216 | GTCTGCCAAGTAAATTTACATGCG | 59.207 | 41.667 | 26.06 | 18.78 | 36.12 | 4.73 |
40 | 41 | 5.708948 | TGTCTGCCAAGTAAATTTACATGC | 58.291 | 37.500 | 26.06 | 23.02 | 36.12 | 4.06 |
41 | 42 | 9.507280 | CTATTGTCTGCCAAGTAAATTTACATG | 57.493 | 33.333 | 26.06 | 23.54 | 36.25 | 3.21 |
42 | 43 | 9.243105 | ACTATTGTCTGCCAAGTAAATTTACAT | 57.757 | 29.630 | 26.06 | 14.63 | 36.25 | 2.29 |
43 | 44 | 8.630054 | ACTATTGTCTGCCAAGTAAATTTACA | 57.370 | 30.769 | 26.06 | 7.94 | 36.25 | 2.41 |
44 | 45 | 8.182227 | GGACTATTGTCTGCCAAGTAAATTTAC | 58.818 | 37.037 | 18.77 | 18.77 | 42.54 | 2.01 |
45 | 46 | 7.885922 | TGGACTATTGTCTGCCAAGTAAATTTA | 59.114 | 33.333 | 7.24 | 0.00 | 42.54 | 1.40 |
46 | 47 | 6.719370 | TGGACTATTGTCTGCCAAGTAAATTT | 59.281 | 34.615 | 7.24 | 0.00 | 42.54 | 1.82 |
47 | 48 | 6.245408 | TGGACTATTGTCTGCCAAGTAAATT | 58.755 | 36.000 | 7.24 | 0.00 | 42.54 | 1.82 |
48 | 49 | 5.815581 | TGGACTATTGTCTGCCAAGTAAAT | 58.184 | 37.500 | 7.24 | 0.00 | 42.54 | 1.40 |
49 | 50 | 5.235850 | TGGACTATTGTCTGCCAAGTAAA | 57.764 | 39.130 | 7.24 | 0.00 | 42.54 | 2.01 |
50 | 51 | 4.832248 | CTGGACTATTGTCTGCCAAGTAA | 58.168 | 43.478 | 7.24 | 0.00 | 42.54 | 2.24 |
51 | 52 | 3.369471 | GCTGGACTATTGTCTGCCAAGTA | 60.369 | 47.826 | 7.24 | 0.00 | 42.54 | 2.24 |
52 | 53 | 2.616510 | GCTGGACTATTGTCTGCCAAGT | 60.617 | 50.000 | 7.24 | 0.00 | 42.54 | 3.16 |
53 | 54 | 2.012673 | GCTGGACTATTGTCTGCCAAG | 58.987 | 52.381 | 7.24 | 0.28 | 42.54 | 3.61 |
54 | 55 | 1.630369 | AGCTGGACTATTGTCTGCCAA | 59.370 | 47.619 | 16.54 | 0.00 | 42.54 | 4.52 |
55 | 56 | 1.279496 | AGCTGGACTATTGTCTGCCA | 58.721 | 50.000 | 16.54 | 4.72 | 42.54 | 4.92 |
56 | 57 | 2.409948 | AAGCTGGACTATTGTCTGCC | 57.590 | 50.000 | 16.54 | 0.85 | 42.54 | 4.85 |
57 | 58 | 4.392921 | TCTAAGCTGGACTATTGTCTGC | 57.607 | 45.455 | 7.24 | 11.25 | 42.54 | 4.26 |
58 | 59 | 5.971763 | ACTTCTAAGCTGGACTATTGTCTG | 58.028 | 41.667 | 7.24 | 2.59 | 42.54 | 3.51 |
59 | 60 | 6.893005 | AGTACTTCTAAGCTGGACTATTGTCT | 59.107 | 38.462 | 7.24 | 0.00 | 42.54 | 3.41 |
60 | 61 | 7.102847 | AGTACTTCTAAGCTGGACTATTGTC | 57.897 | 40.000 | 0.00 | 0.00 | 42.22 | 3.18 |
61 | 62 | 8.053963 | TCTAGTACTTCTAAGCTGGACTATTGT | 58.946 | 37.037 | 0.00 | 0.00 | 0.00 | 2.71 |
62 | 63 | 8.453238 | TCTAGTACTTCTAAGCTGGACTATTG | 57.547 | 38.462 | 0.00 | 0.00 | 0.00 | 1.90 |
63 | 64 | 8.905850 | GTTCTAGTACTTCTAAGCTGGACTATT | 58.094 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
64 | 65 | 8.276477 | AGTTCTAGTACTTCTAAGCTGGACTAT | 58.724 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
65 | 66 | 7.553402 | CAGTTCTAGTACTTCTAAGCTGGACTA | 59.447 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
66 | 67 | 6.376018 | CAGTTCTAGTACTTCTAAGCTGGACT | 59.624 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
67 | 68 | 6.404954 | CCAGTTCTAGTACTTCTAAGCTGGAC | 60.405 | 46.154 | 18.09 | 0.00 | 38.59 | 4.02 |
68 | 69 | 5.652891 | CCAGTTCTAGTACTTCTAAGCTGGA | 59.347 | 44.000 | 18.09 | 0.00 | 38.59 | 3.86 |
69 | 70 | 5.680151 | GCCAGTTCTAGTACTTCTAAGCTGG | 60.680 | 48.000 | 18.39 | 18.39 | 38.88 | 4.85 |
70 | 71 | 5.344884 | GCCAGTTCTAGTACTTCTAAGCTG | 58.655 | 45.833 | 0.00 | 3.10 | 0.00 | 4.24 |
71 | 72 | 4.403113 | GGCCAGTTCTAGTACTTCTAAGCT | 59.597 | 45.833 | 0.00 | 0.00 | 0.00 | 3.74 |
72 | 73 | 4.684877 | GGCCAGTTCTAGTACTTCTAAGC | 58.315 | 47.826 | 0.00 | 0.00 | 0.00 | 3.09 |
73 | 74 | 4.202030 | CCGGCCAGTTCTAGTACTTCTAAG | 60.202 | 50.000 | 2.24 | 0.00 | 0.00 | 2.18 |
74 | 75 | 3.698040 | CCGGCCAGTTCTAGTACTTCTAA | 59.302 | 47.826 | 2.24 | 0.00 | 0.00 | 2.10 |
75 | 76 | 3.054139 | TCCGGCCAGTTCTAGTACTTCTA | 60.054 | 47.826 | 2.24 | 0.00 | 0.00 | 2.10 |
76 | 77 | 2.100989 | CCGGCCAGTTCTAGTACTTCT | 58.899 | 52.381 | 2.24 | 0.00 | 0.00 | 2.85 |
77 | 78 | 2.097825 | TCCGGCCAGTTCTAGTACTTC | 58.902 | 52.381 | 2.24 | 0.00 | 0.00 | 3.01 |
78 | 79 | 2.226962 | TCCGGCCAGTTCTAGTACTT | 57.773 | 50.000 | 2.24 | 0.00 | 0.00 | 2.24 |
79 | 80 | 2.226962 | TTCCGGCCAGTTCTAGTACT | 57.773 | 50.000 | 2.24 | 0.00 | 0.00 | 2.73 |
80 | 81 | 2.028748 | TGTTTCCGGCCAGTTCTAGTAC | 60.029 | 50.000 | 2.24 | 0.00 | 0.00 | 2.73 |
81 | 82 | 2.250031 | TGTTTCCGGCCAGTTCTAGTA | 58.750 | 47.619 | 2.24 | 0.00 | 0.00 | 1.82 |
82 | 83 | 1.053424 | TGTTTCCGGCCAGTTCTAGT | 58.947 | 50.000 | 2.24 | 0.00 | 0.00 | 2.57 |
83 | 84 | 2.403252 | ATGTTTCCGGCCAGTTCTAG | 57.597 | 50.000 | 2.24 | 0.00 | 0.00 | 2.43 |
84 | 85 | 3.602483 | GTTATGTTTCCGGCCAGTTCTA | 58.398 | 45.455 | 2.24 | 0.00 | 0.00 | 2.10 |
85 | 86 | 2.433436 | GTTATGTTTCCGGCCAGTTCT | 58.567 | 47.619 | 2.24 | 0.00 | 0.00 | 3.01 |
86 | 87 | 1.471287 | GGTTATGTTTCCGGCCAGTTC | 59.529 | 52.381 | 2.24 | 0.00 | 0.00 | 3.01 |
87 | 88 | 1.202952 | TGGTTATGTTTCCGGCCAGTT | 60.203 | 47.619 | 2.24 | 0.00 | 0.00 | 3.16 |
88 | 89 | 0.402504 | TGGTTATGTTTCCGGCCAGT | 59.597 | 50.000 | 2.24 | 0.00 | 0.00 | 4.00 |
89 | 90 | 0.808755 | GTGGTTATGTTTCCGGCCAG | 59.191 | 55.000 | 2.24 | 0.00 | 0.00 | 4.85 |
90 | 91 | 0.402504 | AGTGGTTATGTTTCCGGCCA | 59.597 | 50.000 | 2.24 | 0.00 | 0.00 | 5.36 |
91 | 92 | 0.808755 | CAGTGGTTATGTTTCCGGCC | 59.191 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
92 | 93 | 1.816074 | TCAGTGGTTATGTTTCCGGC | 58.184 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
93 | 94 | 3.670625 | TCTTCAGTGGTTATGTTTCCGG | 58.329 | 45.455 | 0.00 | 0.00 | 0.00 | 5.14 |
94 | 95 | 5.880054 | ATTCTTCAGTGGTTATGTTTCCG | 57.120 | 39.130 | 0.00 | 0.00 | 0.00 | 4.30 |
95 | 96 | 6.015434 | ACCAATTCTTCAGTGGTTATGTTTCC | 60.015 | 38.462 | 0.00 | 0.00 | 43.19 | 3.13 |
96 | 97 | 6.981722 | ACCAATTCTTCAGTGGTTATGTTTC | 58.018 | 36.000 | 0.00 | 0.00 | 43.19 | 2.78 |
97 | 98 | 6.549364 | TGACCAATTCTTCAGTGGTTATGTTT | 59.451 | 34.615 | 0.00 | 0.00 | 45.72 | 2.83 |
98 | 99 | 6.068010 | TGACCAATTCTTCAGTGGTTATGTT | 58.932 | 36.000 | 0.00 | 0.00 | 45.72 | 2.71 |
99 | 100 | 5.630121 | TGACCAATTCTTCAGTGGTTATGT | 58.370 | 37.500 | 0.00 | 0.00 | 45.72 | 2.29 |
100 | 101 | 6.573664 | TTGACCAATTCTTCAGTGGTTATG | 57.426 | 37.500 | 0.00 | 0.00 | 45.72 | 1.90 |
101 | 102 | 7.595819 | TTTTGACCAATTCTTCAGTGGTTAT | 57.404 | 32.000 | 0.00 | 0.00 | 45.72 | 1.89 |
102 | 103 | 7.262048 | GTTTTTGACCAATTCTTCAGTGGTTA | 58.738 | 34.615 | 0.00 | 0.00 | 45.72 | 2.85 |
103 | 104 | 5.930837 | TTTTGACCAATTCTTCAGTGGTT | 57.069 | 34.783 | 0.00 | 0.00 | 45.72 | 3.67 |
125 | 126 | 9.474313 | ACATCACATAATGGTTGTAATTAGGTT | 57.526 | 29.630 | 0.00 | 0.00 | 33.52 | 3.50 |
126 | 127 | 8.902806 | CACATCACATAATGGTTGTAATTAGGT | 58.097 | 33.333 | 0.00 | 0.00 | 35.51 | 3.08 |
127 | 128 | 7.862372 | GCACATCACATAATGGTTGTAATTAGG | 59.138 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
128 | 129 | 8.404765 | TGCACATCACATAATGGTTGTAATTAG | 58.595 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
129 | 130 | 8.286191 | TGCACATCACATAATGGTTGTAATTA | 57.714 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
130 | 131 | 7.167924 | TGCACATCACATAATGGTTGTAATT | 57.832 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
131 | 132 | 6.772360 | TGCACATCACATAATGGTTGTAAT | 57.228 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
132 | 133 | 6.772360 | ATGCACATCACATAATGGTTGTAA | 57.228 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
133 | 134 | 6.017192 | GCTATGCACATCACATAATGGTTGTA | 60.017 | 38.462 | 0.00 | 0.00 | 29.93 | 2.41 |
134 | 135 | 5.221106 | GCTATGCACATCACATAATGGTTGT | 60.221 | 40.000 | 0.00 | 0.00 | 29.93 | 3.32 |
135 | 136 | 5.217393 | GCTATGCACATCACATAATGGTTG | 58.783 | 41.667 | 0.00 | 0.00 | 29.93 | 3.77 |
136 | 137 | 4.888823 | TGCTATGCACATCACATAATGGTT | 59.111 | 37.500 | 0.00 | 0.00 | 31.71 | 3.67 |
137 | 138 | 4.463070 | TGCTATGCACATCACATAATGGT | 58.537 | 39.130 | 0.00 | 0.00 | 31.71 | 3.55 |
138 | 139 | 5.441709 | TTGCTATGCACATCACATAATGG | 57.558 | 39.130 | 0.00 | 0.00 | 38.71 | 3.16 |
139 | 140 | 7.758613 | TTTTTGCTATGCACATCACATAATG | 57.241 | 32.000 | 0.00 | 0.00 | 38.71 | 1.90 |
140 | 141 | 8.198778 | TCATTTTTGCTATGCACATCACATAAT | 58.801 | 29.630 | 0.00 | 0.00 | 38.71 | 1.28 |
141 | 142 | 7.545489 | TCATTTTTGCTATGCACATCACATAA | 58.455 | 30.769 | 0.00 | 0.00 | 38.71 | 1.90 |
142 | 143 | 7.098074 | TCATTTTTGCTATGCACATCACATA | 57.902 | 32.000 | 0.00 | 0.00 | 38.71 | 2.29 |
143 | 144 | 5.968254 | TCATTTTTGCTATGCACATCACAT | 58.032 | 33.333 | 0.00 | 0.00 | 38.71 | 3.21 |
144 | 145 | 5.388408 | TCATTTTTGCTATGCACATCACA | 57.612 | 34.783 | 0.00 | 0.00 | 38.71 | 3.58 |
145 | 146 | 7.990541 | TTATCATTTTTGCTATGCACATCAC | 57.009 | 32.000 | 0.00 | 0.00 | 38.71 | 3.06 |
146 | 147 | 8.033626 | TGTTTATCATTTTTGCTATGCACATCA | 58.966 | 29.630 | 0.00 | 0.00 | 38.71 | 3.07 |
147 | 148 | 8.323140 | GTGTTTATCATTTTTGCTATGCACATC | 58.677 | 33.333 | 0.00 | 0.00 | 38.71 | 3.06 |
148 | 149 | 7.278424 | GGTGTTTATCATTTTTGCTATGCACAT | 59.722 | 33.333 | 0.00 | 0.00 | 38.71 | 3.21 |
149 | 150 | 6.589523 | GGTGTTTATCATTTTTGCTATGCACA | 59.410 | 34.615 | 0.00 | 0.00 | 38.71 | 4.57 |
150 | 151 | 6.237542 | CGGTGTTTATCATTTTTGCTATGCAC | 60.238 | 38.462 | 0.00 | 0.00 | 38.71 | 4.57 |
151 | 152 | 5.804473 | CGGTGTTTATCATTTTTGCTATGCA | 59.196 | 36.000 | 0.00 | 0.00 | 36.47 | 3.96 |
152 | 153 | 6.020678 | GTCGGTGTTTATCATTTTTGCTATGC | 60.021 | 38.462 | 0.00 | 0.00 | 0.00 | 3.14 |
153 | 154 | 6.472163 | GGTCGGTGTTTATCATTTTTGCTATG | 59.528 | 38.462 | 0.00 | 0.00 | 0.00 | 2.23 |
154 | 155 | 6.151985 | TGGTCGGTGTTTATCATTTTTGCTAT | 59.848 | 34.615 | 0.00 | 0.00 | 0.00 | 2.97 |
155 | 156 | 5.473846 | TGGTCGGTGTTTATCATTTTTGCTA | 59.526 | 36.000 | 0.00 | 0.00 | 0.00 | 3.49 |
156 | 157 | 4.279671 | TGGTCGGTGTTTATCATTTTTGCT | 59.720 | 37.500 | 0.00 | 0.00 | 0.00 | 3.91 |
157 | 158 | 4.551388 | TGGTCGGTGTTTATCATTTTTGC | 58.449 | 39.130 | 0.00 | 0.00 | 0.00 | 3.68 |
158 | 159 | 7.650834 | ATTTGGTCGGTGTTTATCATTTTTG | 57.349 | 32.000 | 0.00 | 0.00 | 0.00 | 2.44 |
159 | 160 | 7.815549 | GGTATTTGGTCGGTGTTTATCATTTTT | 59.184 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
160 | 161 | 7.317390 | GGTATTTGGTCGGTGTTTATCATTTT | 58.683 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
161 | 162 | 6.403855 | CGGTATTTGGTCGGTGTTTATCATTT | 60.404 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
162 | 163 | 5.065474 | CGGTATTTGGTCGGTGTTTATCATT | 59.935 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
163 | 164 | 4.573201 | CGGTATTTGGTCGGTGTTTATCAT | 59.427 | 41.667 | 0.00 | 0.00 | 0.00 | 2.45 |
164 | 165 | 3.933955 | CGGTATTTGGTCGGTGTTTATCA | 59.066 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
165 | 166 | 3.310501 | CCGGTATTTGGTCGGTGTTTATC | 59.689 | 47.826 | 0.00 | 0.00 | 39.04 | 1.75 |
166 | 167 | 3.055240 | TCCGGTATTTGGTCGGTGTTTAT | 60.055 | 43.478 | 0.00 | 0.00 | 43.75 | 1.40 |
167 | 168 | 2.301296 | TCCGGTATTTGGTCGGTGTTTA | 59.699 | 45.455 | 0.00 | 0.00 | 43.75 | 2.01 |
168 | 169 | 1.072015 | TCCGGTATTTGGTCGGTGTTT | 59.928 | 47.619 | 0.00 | 0.00 | 43.75 | 2.83 |
169 | 170 | 0.686224 | TCCGGTATTTGGTCGGTGTT | 59.314 | 50.000 | 0.00 | 0.00 | 43.75 | 3.32 |
170 | 171 | 0.906775 | ATCCGGTATTTGGTCGGTGT | 59.093 | 50.000 | 0.00 | 0.00 | 43.75 | 4.16 |
171 | 172 | 1.295792 | CATCCGGTATTTGGTCGGTG | 58.704 | 55.000 | 0.00 | 0.00 | 43.75 | 4.94 |
172 | 173 | 0.463116 | GCATCCGGTATTTGGTCGGT | 60.463 | 55.000 | 0.00 | 0.00 | 43.75 | 4.69 |
173 | 174 | 0.462937 | TGCATCCGGTATTTGGTCGG | 60.463 | 55.000 | 0.00 | 0.00 | 44.59 | 4.79 |
174 | 175 | 1.593196 | ATGCATCCGGTATTTGGTCG | 58.407 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
175 | 176 | 3.472652 | TGTATGCATCCGGTATTTGGTC | 58.527 | 45.455 | 0.19 | 0.00 | 0.00 | 4.02 |
176 | 177 | 3.135712 | TCTGTATGCATCCGGTATTTGGT | 59.864 | 43.478 | 0.19 | 0.00 | 0.00 | 3.67 |
177 | 178 | 3.738982 | TCTGTATGCATCCGGTATTTGG | 58.261 | 45.455 | 0.19 | 0.00 | 0.00 | 3.28 |
178 | 179 | 4.393062 | GGATCTGTATGCATCCGGTATTTG | 59.607 | 45.833 | 0.19 | 0.00 | 29.40 | 2.32 |
179 | 180 | 4.041567 | TGGATCTGTATGCATCCGGTATTT | 59.958 | 41.667 | 0.19 | 0.00 | 41.55 | 1.40 |
180 | 181 | 3.582647 | TGGATCTGTATGCATCCGGTATT | 59.417 | 43.478 | 0.19 | 0.00 | 41.55 | 1.89 |
181 | 182 | 3.055819 | GTGGATCTGTATGCATCCGGTAT | 60.056 | 47.826 | 0.19 | 0.00 | 41.55 | 2.73 |
182 | 183 | 2.299013 | GTGGATCTGTATGCATCCGGTA | 59.701 | 50.000 | 0.19 | 0.00 | 41.55 | 4.02 |
183 | 184 | 1.070758 | GTGGATCTGTATGCATCCGGT | 59.929 | 52.381 | 0.19 | 0.00 | 41.55 | 5.28 |
184 | 185 | 1.609061 | GGTGGATCTGTATGCATCCGG | 60.609 | 57.143 | 0.19 | 0.00 | 41.55 | 5.14 |
185 | 186 | 1.070601 | TGGTGGATCTGTATGCATCCG | 59.929 | 52.381 | 0.19 | 0.00 | 41.55 | 4.18 |
186 | 187 | 2.936919 | TGGTGGATCTGTATGCATCC | 57.063 | 50.000 | 0.19 | 0.00 | 33.81 | 3.51 |
187 | 188 | 4.883585 | TCTTTTGGTGGATCTGTATGCATC | 59.116 | 41.667 | 0.19 | 0.00 | 35.73 | 3.91 |
188 | 189 | 4.858850 | TCTTTTGGTGGATCTGTATGCAT | 58.141 | 39.130 | 3.79 | 3.79 | 35.73 | 3.96 |
189 | 190 | 4.299586 | TCTTTTGGTGGATCTGTATGCA | 57.700 | 40.909 | 0.00 | 0.00 | 0.00 | 3.96 |
190 | 191 | 6.942532 | TTATCTTTTGGTGGATCTGTATGC | 57.057 | 37.500 | 0.00 | 0.00 | 0.00 | 3.14 |
191 | 192 | 8.184192 | GTGTTTATCTTTTGGTGGATCTGTATG | 58.816 | 37.037 | 0.00 | 0.00 | 0.00 | 2.39 |
192 | 193 | 7.065803 | CGTGTTTATCTTTTGGTGGATCTGTAT | 59.934 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
193 | 194 | 6.370442 | CGTGTTTATCTTTTGGTGGATCTGTA | 59.630 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
194 | 195 | 5.181245 | CGTGTTTATCTTTTGGTGGATCTGT | 59.819 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
195 | 196 | 5.391950 | CCGTGTTTATCTTTTGGTGGATCTG | 60.392 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
196 | 197 | 4.700213 | CCGTGTTTATCTTTTGGTGGATCT | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
197 | 198 | 4.698304 | TCCGTGTTTATCTTTTGGTGGATC | 59.302 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
198 | 199 | 4.457949 | GTCCGTGTTTATCTTTTGGTGGAT | 59.542 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
199 | 200 | 3.816523 | GTCCGTGTTTATCTTTTGGTGGA | 59.183 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
200 | 201 | 3.364565 | CGTCCGTGTTTATCTTTTGGTGG | 60.365 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
201 | 202 | 3.364565 | CCGTCCGTGTTTATCTTTTGGTG | 60.365 | 47.826 | 0.00 | 0.00 | 0.00 | 4.17 |
202 | 203 | 2.809696 | CCGTCCGTGTTTATCTTTTGGT | 59.190 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
203 | 204 | 3.068560 | TCCGTCCGTGTTTATCTTTTGG | 58.931 | 45.455 | 0.00 | 0.00 | 0.00 | 3.28 |
204 | 205 | 4.735662 | TTCCGTCCGTGTTTATCTTTTG | 57.264 | 40.909 | 0.00 | 0.00 | 0.00 | 2.44 |
205 | 206 | 4.393990 | GGATTCCGTCCGTGTTTATCTTTT | 59.606 | 41.667 | 0.00 | 0.00 | 37.23 | 2.27 |
206 | 207 | 3.937079 | GGATTCCGTCCGTGTTTATCTTT | 59.063 | 43.478 | 0.00 | 0.00 | 37.23 | 2.52 |
207 | 208 | 3.528532 | GGATTCCGTCCGTGTTTATCTT | 58.471 | 45.455 | 0.00 | 0.00 | 37.23 | 2.40 |
208 | 209 | 3.175109 | GGATTCCGTCCGTGTTTATCT | 57.825 | 47.619 | 0.00 | 0.00 | 37.23 | 1.98 |
219 | 220 | 1.866063 | GCGATCTCACAGGATTCCGTC | 60.866 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
220 | 221 | 0.103208 | GCGATCTCACAGGATTCCGT | 59.897 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
221 | 222 | 0.387202 | AGCGATCTCACAGGATTCCG | 59.613 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
222 | 223 | 1.539929 | CCAGCGATCTCACAGGATTCC | 60.540 | 57.143 | 0.00 | 0.00 | 0.00 | 3.01 |
223 | 224 | 1.410517 | TCCAGCGATCTCACAGGATTC | 59.589 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
224 | 225 | 1.411977 | CTCCAGCGATCTCACAGGATT | 59.588 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
225 | 226 | 1.039068 | CTCCAGCGATCTCACAGGAT | 58.961 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
226 | 227 | 0.034089 | TCTCCAGCGATCTCACAGGA | 60.034 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
227 | 228 | 0.102120 | GTCTCCAGCGATCTCACAGG | 59.898 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
228 | 229 | 0.813821 | TGTCTCCAGCGATCTCACAG | 59.186 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
229 | 230 | 0.528017 | GTGTCTCCAGCGATCTCACA | 59.472 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
230 | 231 | 0.528017 | TGTGTCTCCAGCGATCTCAC | 59.472 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
231 | 232 | 0.528017 | GTGTGTCTCCAGCGATCTCA | 59.472 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
232 | 233 | 0.179124 | GGTGTGTCTCCAGCGATCTC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 2.75 |
233 | 234 | 0.613292 | AGGTGTGTCTCCAGCGATCT | 60.613 | 55.000 | 0.00 | 0.00 | 37.88 | 2.75 |
234 | 235 | 0.179124 | GAGGTGTGTCTCCAGCGATC | 60.179 | 60.000 | 0.00 | 0.00 | 37.88 | 3.69 |
235 | 236 | 1.893786 | GAGGTGTGTCTCCAGCGAT | 59.106 | 57.895 | 0.00 | 0.00 | 37.88 | 4.58 |
236 | 237 | 3.366629 | GAGGTGTGTCTCCAGCGA | 58.633 | 61.111 | 0.00 | 0.00 | 37.88 | 4.93 |
242 | 243 | 0.674895 | GGCATGTGGAGGTGTGTCTC | 60.675 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
243 | 244 | 1.376466 | GGCATGTGGAGGTGTGTCT | 59.624 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
244 | 245 | 1.675641 | GGGCATGTGGAGGTGTGTC | 60.676 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
245 | 246 | 2.129555 | GAGGGCATGTGGAGGTGTGT | 62.130 | 60.000 | 0.00 | 0.00 | 0.00 | 3.72 |
246 | 247 | 1.377725 | GAGGGCATGTGGAGGTGTG | 60.378 | 63.158 | 0.00 | 0.00 | 0.00 | 3.82 |
247 | 248 | 2.606587 | GGAGGGCATGTGGAGGTGT | 61.607 | 63.158 | 0.00 | 0.00 | 0.00 | 4.16 |
248 | 249 | 2.141011 | TTGGAGGGCATGTGGAGGTG | 62.141 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
249 | 250 | 1.852157 | TTGGAGGGCATGTGGAGGT | 60.852 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
250 | 251 | 1.379044 | GTTGGAGGGCATGTGGAGG | 60.379 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
251 | 252 | 1.746615 | CGTTGGAGGGCATGTGGAG | 60.747 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
252 | 253 | 1.561769 | ATCGTTGGAGGGCATGTGGA | 61.562 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
253 | 254 | 1.077501 | ATCGTTGGAGGGCATGTGG | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
254 | 255 | 0.677731 | ACATCGTTGGAGGGCATGTG | 60.678 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 |
255 | 256 | 0.038166 | AACATCGTTGGAGGGCATGT | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
256 | 257 | 2.036958 | TAACATCGTTGGAGGGCATG | 57.963 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
257 | 258 | 2.752903 | GTTTAACATCGTTGGAGGGCAT | 59.247 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
258 | 259 | 2.156098 | GTTTAACATCGTTGGAGGGCA | 58.844 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
259 | 260 | 1.471287 | GGTTTAACATCGTTGGAGGGC | 59.529 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
260 | 261 | 3.067684 | AGGTTTAACATCGTTGGAGGG | 57.932 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
261 | 262 | 5.293569 | GTGATAGGTTTAACATCGTTGGAGG | 59.706 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
262 | 263 | 5.293569 | GGTGATAGGTTTAACATCGTTGGAG | 59.706 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
263 | 264 | 5.180271 | GGTGATAGGTTTAACATCGTTGGA | 58.820 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
264 | 265 | 4.033587 | CGGTGATAGGTTTAACATCGTTGG | 59.966 | 45.833 | 0.00 | 0.00 | 33.17 | 3.77 |
265 | 266 | 4.033587 | CCGGTGATAGGTTTAACATCGTTG | 59.966 | 45.833 | 0.00 | 0.00 | 35.23 | 4.10 |
266 | 267 | 4.186159 | CCGGTGATAGGTTTAACATCGTT | 58.814 | 43.478 | 0.00 | 0.00 | 35.23 | 3.85 |
267 | 268 | 3.431207 | CCCGGTGATAGGTTTAACATCGT | 60.431 | 47.826 | 0.00 | 0.00 | 35.23 | 3.73 |
268 | 269 | 3.128349 | CCCGGTGATAGGTTTAACATCG | 58.872 | 50.000 | 0.00 | 0.00 | 36.34 | 3.84 |
269 | 270 | 4.411256 | TCCCGGTGATAGGTTTAACATC | 57.589 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
270 | 271 | 4.445735 | CCATCCCGGTGATAGGTTTAACAT | 60.446 | 45.833 | 0.00 | 0.00 | 30.56 | 2.71 |
271 | 272 | 3.118186 | CCATCCCGGTGATAGGTTTAACA | 60.118 | 47.826 | 0.00 | 0.00 | 30.56 | 2.41 |
272 | 273 | 3.473625 | CCATCCCGGTGATAGGTTTAAC | 58.526 | 50.000 | 0.00 | 0.00 | 30.56 | 2.01 |
273 | 274 | 2.440253 | CCCATCCCGGTGATAGGTTTAA | 59.560 | 50.000 | 0.00 | 0.00 | 28.52 | 1.52 |
274 | 275 | 2.051692 | CCCATCCCGGTGATAGGTTTA | 58.948 | 52.381 | 0.00 | 0.00 | 28.52 | 2.01 |
275 | 276 | 0.843984 | CCCATCCCGGTGATAGGTTT | 59.156 | 55.000 | 0.00 | 0.00 | 28.52 | 3.27 |
276 | 277 | 1.705997 | GCCCATCCCGGTGATAGGTT | 61.706 | 60.000 | 15.20 | 0.00 | 34.95 | 3.50 |
277 | 278 | 2.147387 | GCCCATCCCGGTGATAGGT | 61.147 | 63.158 | 15.20 | 0.00 | 34.95 | 3.08 |
278 | 279 | 1.843376 | AGCCCATCCCGGTGATAGG | 60.843 | 63.158 | 11.32 | 11.32 | 35.53 | 2.57 |
279 | 280 | 1.372683 | CAGCCCATCCCGGTGATAG | 59.627 | 63.158 | 0.00 | 0.00 | 30.56 | 2.08 |
280 | 281 | 2.146724 | CCAGCCCATCCCGGTGATA | 61.147 | 63.158 | 0.00 | 0.00 | 30.56 | 2.15 |
281 | 282 | 3.492353 | CCAGCCCATCCCGGTGAT | 61.492 | 66.667 | 0.00 | 0.00 | 0.00 | 3.06 |
288 | 289 | 3.728292 | CTTCCTGCCCAGCCCATCC | 62.728 | 68.421 | 0.00 | 0.00 | 0.00 | 3.51 |
289 | 290 | 2.123982 | CTTCCTGCCCAGCCCATC | 60.124 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
290 | 291 | 2.240918 | TTCTTCCTGCCCAGCCCAT | 61.241 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
291 | 292 | 2.858476 | TTCTTCCTGCCCAGCCCA | 60.858 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
292 | 293 | 2.361737 | GTTCTTCCTGCCCAGCCC | 60.362 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
293 | 294 | 2.361737 | GGTTCTTCCTGCCCAGCC | 60.362 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
294 | 295 | 2.759795 | AGGTTCTTCCTGCCCAGC | 59.240 | 61.111 | 0.00 | 0.00 | 46.19 | 4.85 |
302 | 303 | 5.422214 | TGAAGATGGAGTAAGGTTCTTCC | 57.578 | 43.478 | 8.12 | 0.00 | 40.88 | 3.46 |
303 | 304 | 8.012957 | TCTATGAAGATGGAGTAAGGTTCTTC | 57.987 | 38.462 | 0.00 | 0.00 | 41.58 | 2.87 |
304 | 305 | 7.418483 | GCTCTATGAAGATGGAGTAAGGTTCTT | 60.418 | 40.741 | 0.00 | 0.00 | 38.99 | 2.52 |
305 | 306 | 6.041523 | GCTCTATGAAGATGGAGTAAGGTTCT | 59.958 | 42.308 | 0.00 | 0.00 | 38.99 | 3.01 |
306 | 307 | 6.220201 | GCTCTATGAAGATGGAGTAAGGTTC | 58.780 | 44.000 | 0.00 | 0.00 | 38.99 | 3.62 |
307 | 308 | 5.071115 | GGCTCTATGAAGATGGAGTAAGGTT | 59.929 | 44.000 | 0.00 | 0.00 | 38.99 | 3.50 |
308 | 309 | 4.591072 | GGCTCTATGAAGATGGAGTAAGGT | 59.409 | 45.833 | 0.00 | 0.00 | 38.99 | 3.50 |
309 | 310 | 4.590647 | TGGCTCTATGAAGATGGAGTAAGG | 59.409 | 45.833 | 0.00 | 0.00 | 38.99 | 2.69 |
310 | 311 | 5.510520 | GGTGGCTCTATGAAGATGGAGTAAG | 60.511 | 48.000 | 0.00 | 0.00 | 38.99 | 2.34 |
311 | 312 | 4.345257 | GGTGGCTCTATGAAGATGGAGTAA | 59.655 | 45.833 | 0.00 | 0.00 | 38.99 | 2.24 |
312 | 313 | 3.898123 | GGTGGCTCTATGAAGATGGAGTA | 59.102 | 47.826 | 0.00 | 0.00 | 38.99 | 2.59 |
313 | 314 | 2.703007 | GGTGGCTCTATGAAGATGGAGT | 59.297 | 50.000 | 0.00 | 0.00 | 38.99 | 3.85 |
314 | 315 | 2.702478 | TGGTGGCTCTATGAAGATGGAG | 59.298 | 50.000 | 0.00 | 0.00 | 39.60 | 3.86 |
315 | 316 | 2.435805 | GTGGTGGCTCTATGAAGATGGA | 59.564 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
316 | 317 | 2.486191 | GGTGGTGGCTCTATGAAGATGG | 60.486 | 54.545 | 0.00 | 0.00 | 0.00 | 3.51 |
317 | 318 | 2.804572 | CGGTGGTGGCTCTATGAAGATG | 60.805 | 54.545 | 0.00 | 0.00 | 0.00 | 2.90 |
318 | 319 | 1.414181 | CGGTGGTGGCTCTATGAAGAT | 59.586 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
319 | 320 | 0.824109 | CGGTGGTGGCTCTATGAAGA | 59.176 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
320 | 321 | 0.811616 | GCGGTGGTGGCTCTATGAAG | 60.812 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
321 | 322 | 1.220749 | GCGGTGGTGGCTCTATGAA | 59.779 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
322 | 323 | 2.731571 | GGCGGTGGTGGCTCTATGA | 61.732 | 63.158 | 0.00 | 0.00 | 0.00 | 2.15 |
323 | 324 | 2.203070 | GGCGGTGGTGGCTCTATG | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 2.23 |
324 | 325 | 2.365635 | AGGCGGTGGTGGCTCTAT | 60.366 | 61.111 | 0.00 | 0.00 | 41.54 | 1.98 |
336 | 337 | 4.521062 | CTCAGGAAGGCGAGGCGG | 62.521 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
338 | 339 | 3.397613 | ATGCTCAGGAAGGCGAGGC | 62.398 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
339 | 340 | 1.523258 | CATGCTCAGGAAGGCGAGG | 60.523 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
340 | 341 | 0.809241 | GTCATGCTCAGGAAGGCGAG | 60.809 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
341 | 342 | 1.219124 | GTCATGCTCAGGAAGGCGA | 59.781 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
342 | 343 | 0.674581 | TTGTCATGCTCAGGAAGGCG | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
343 | 344 | 1.093159 | CTTGTCATGCTCAGGAAGGC | 58.907 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
344 | 345 | 2.486472 | ACTTGTCATGCTCAGGAAGG | 57.514 | 50.000 | 6.79 | 0.00 | 0.00 | 3.46 |
345 | 346 | 3.190118 | GGAAACTTGTCATGCTCAGGAAG | 59.810 | 47.826 | 6.79 | 0.00 | 0.00 | 3.46 |
346 | 347 | 3.149196 | GGAAACTTGTCATGCTCAGGAA | 58.851 | 45.455 | 6.79 | 0.00 | 0.00 | 3.36 |
347 | 348 | 2.373169 | AGGAAACTTGTCATGCTCAGGA | 59.627 | 45.455 | 6.79 | 0.00 | 37.44 | 3.86 |
348 | 349 | 2.787994 | AGGAAACTTGTCATGCTCAGG | 58.212 | 47.619 | 0.00 | 0.00 | 37.44 | 3.86 |
349 | 350 | 4.142730 | GCTTAGGAAACTTGTCATGCTCAG | 60.143 | 45.833 | 0.00 | 0.00 | 43.67 | 3.35 |
350 | 351 | 3.753272 | GCTTAGGAAACTTGTCATGCTCA | 59.247 | 43.478 | 0.00 | 0.00 | 43.67 | 4.26 |
351 | 352 | 3.753272 | TGCTTAGGAAACTTGTCATGCTC | 59.247 | 43.478 | 0.00 | 0.00 | 43.67 | 4.26 |
352 | 353 | 3.754965 | TGCTTAGGAAACTTGTCATGCT | 58.245 | 40.909 | 0.00 | 0.00 | 43.67 | 3.79 |
353 | 354 | 4.503741 | TTGCTTAGGAAACTTGTCATGC | 57.496 | 40.909 | 0.00 | 0.00 | 43.67 | 4.06 |
354 | 355 | 6.076981 | AGTTTGCTTAGGAAACTTGTCATG | 57.923 | 37.500 | 22.89 | 0.00 | 40.04 | 3.07 |
355 | 356 | 7.817418 | TTAGTTTGCTTAGGAAACTTGTCAT | 57.183 | 32.000 | 30.59 | 12.91 | 40.04 | 3.06 |
356 | 357 | 7.633193 | TTTAGTTTGCTTAGGAAACTTGTCA | 57.367 | 32.000 | 30.59 | 14.55 | 40.04 | 3.58 |
357 | 358 | 8.920509 | TTTTTAGTTTGCTTAGGAAACTTGTC | 57.079 | 30.769 | 30.59 | 6.44 | 40.04 | 3.18 |
380 | 381 | 9.975218 | AGTCCATATACATCTTTAGGTGTTTTT | 57.025 | 29.630 | 0.29 | 0.00 | 0.00 | 1.94 |
381 | 382 | 9.614792 | GAGTCCATATACATCTTTAGGTGTTTT | 57.385 | 33.333 | 0.29 | 0.00 | 0.00 | 2.43 |
382 | 383 | 8.768397 | TGAGTCCATATACATCTTTAGGTGTTT | 58.232 | 33.333 | 0.29 | 0.00 | 0.00 | 2.83 |
383 | 384 | 8.319057 | TGAGTCCATATACATCTTTAGGTGTT | 57.681 | 34.615 | 0.29 | 0.00 | 0.00 | 3.32 |
384 | 385 | 7.914427 | TGAGTCCATATACATCTTTAGGTGT | 57.086 | 36.000 | 0.77 | 0.77 | 0.00 | 4.16 |
385 | 386 | 8.588472 | TGATGAGTCCATATACATCTTTAGGTG | 58.412 | 37.037 | 0.00 | 0.00 | 39.54 | 4.00 |
386 | 387 | 8.727100 | TGATGAGTCCATATACATCTTTAGGT | 57.273 | 34.615 | 0.00 | 0.00 | 39.54 | 3.08 |
402 | 403 | 5.824904 | ATGCACTTGTATTTGATGAGTCC | 57.175 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
404 | 405 | 5.477984 | ACCAATGCACTTGTATTTGATGAGT | 59.522 | 36.000 | 0.00 | 0.00 | 32.61 | 3.41 |
413 | 415 | 9.860650 | TTATTTATAGGACCAATGCACTTGTAT | 57.139 | 29.630 | 0.00 | 0.00 | 32.61 | 2.29 |
507 | 510 | 9.346005 | TGCATTAGTACTACTAGTAGCATGTAA | 57.654 | 33.333 | 26.54 | 18.69 | 36.66 | 2.41 |
541 | 544 | 9.221933 | GAGCATCAATCATCTCAGATAAAAGAT | 57.778 | 33.333 | 0.00 | 0.00 | 31.01 | 2.40 |
577 | 580 | 9.589111 | TGTCATGTAGCGATTTGTTATACTTTA | 57.411 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
593 | 596 | 1.466167 | CCAAGCAGTGTGTCATGTAGC | 59.534 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
595 | 598 | 2.766313 | GTCCAAGCAGTGTGTCATGTA | 58.234 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
612 | 615 | 2.203209 | GGCCACCATCATCCGTCC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
617 | 620 | 3.058016 | CGAAATACATGGCCACCATCATC | 60.058 | 47.826 | 8.16 | 2.05 | 43.15 | 2.92 |
628 | 631 | 5.385509 | AACTGGAAAACCGAAATACATGG | 57.614 | 39.130 | 0.00 | 0.00 | 0.00 | 3.66 |
630 | 633 | 6.916440 | GGTTAACTGGAAAACCGAAATACAT | 58.084 | 36.000 | 5.42 | 0.00 | 36.12 | 2.29 |
631 | 634 | 6.316440 | GGTTAACTGGAAAACCGAAATACA | 57.684 | 37.500 | 5.42 | 0.00 | 36.12 | 2.29 |
640 | 643 | 4.799949 | GGTTTGTTCGGTTAACTGGAAAAC | 59.200 | 41.667 | 20.60 | 20.60 | 38.99 | 2.43 |
644 | 647 | 3.278668 | TGGTTTGTTCGGTTAACTGGA | 57.721 | 42.857 | 14.44 | 2.45 | 38.99 | 3.86 |
647 | 650 | 3.181498 | CGGTTTGGTTTGTTCGGTTAACT | 60.181 | 43.478 | 5.42 | 0.00 | 38.99 | 2.24 |
693 | 696 | 9.423061 | GAAATAATCACAATAAAACTTGCCACT | 57.577 | 29.630 | 0.00 | 0.00 | 0.00 | 4.00 |
714 | 717 | 9.974980 | GTTTCCTGGAAAATAACAACTGAAATA | 57.025 | 29.630 | 22.66 | 0.00 | 33.14 | 1.40 |
720 | 723 | 8.318412 | AGTTTTGTTTCCTGGAAAATAACAACT | 58.682 | 29.630 | 26.65 | 24.12 | 38.13 | 3.16 |
723 | 726 | 8.073467 | AGAGTTTTGTTTCCTGGAAAATAACA | 57.927 | 30.769 | 26.65 | 19.31 | 33.14 | 2.41 |
727 | 730 | 9.952030 | TTTTTAGAGTTTTGTTTCCTGGAAAAT | 57.048 | 25.926 | 22.66 | 0.28 | 33.14 | 1.82 |
732 | 735 | 6.046593 | GGGTTTTTAGAGTTTTGTTTCCTGG | 58.953 | 40.000 | 0.00 | 0.00 | 0.00 | 4.45 |
757 | 760 | 6.102006 | TGGTTAATTCGCTTCGTCTTATTG | 57.898 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
762 | 765 | 7.042254 | GGTTTATATGGTTAATTCGCTTCGTCT | 60.042 | 37.037 | 0.00 | 0.00 | 0.00 | 4.18 |
777 | 780 | 4.913784 | AGTGGTTGTTCGGTTTATATGGT | 58.086 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
784 | 787 | 2.425668 | CAAGGAAGTGGTTGTTCGGTTT | 59.574 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
796 | 799 | 5.882557 | ACCACATATTAGAAGCAAGGAAGTG | 59.117 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
797 | 800 | 6.067217 | ACCACATATTAGAAGCAAGGAAGT | 57.933 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
798 | 801 | 6.599244 | TGAACCACATATTAGAAGCAAGGAAG | 59.401 | 38.462 | 0.00 | 0.00 | 0.00 | 3.46 |
799 | 802 | 6.480763 | TGAACCACATATTAGAAGCAAGGAA | 58.519 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
801 | 804 | 6.757897 | TTGAACCACATATTAGAAGCAAGG | 57.242 | 37.500 | 0.00 | 0.00 | 0.00 | 3.61 |
805 | 808 | 6.318648 | TCCACATTGAACCACATATTAGAAGC | 59.681 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
808 | 811 | 6.957631 | ACTCCACATTGAACCACATATTAGA | 58.042 | 36.000 | 0.00 | 0.00 | 0.00 | 2.10 |
861 | 871 | 2.151202 | GAAACTCTGATGGCGGTTTGA | 58.849 | 47.619 | 0.00 | 0.00 | 32.95 | 2.69 |
907 | 932 | 0.608130 | GGTGTGGGATGGAAAAAGGC | 59.392 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
922 | 954 | 0.544697 | AAGAAACGTGTGGAGGGTGT | 59.455 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
1050 | 1113 | 2.522367 | GGAGTTGGGGTCCGGTTCA | 61.522 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
1548 | 2196 | 2.262915 | CTGTTCGCCTCCTCGCTT | 59.737 | 61.111 | 0.00 | 0.00 | 0.00 | 4.68 |
1713 | 2569 | 1.548973 | AACGCTCAAGAACGCACTCG | 61.549 | 55.000 | 0.00 | 0.00 | 42.43 | 4.18 |
2246 | 3330 | 3.688694 | TGTACGTCTGGCCAAGTAATT | 57.311 | 42.857 | 7.01 | 0.00 | 0.00 | 1.40 |
2389 | 4226 | 6.639563 | TCAAGATCACACATTTCGGATTAGA | 58.360 | 36.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2522 | 4408 | 2.644798 | AGCCCATACCTTGTTCTTGACT | 59.355 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
2541 | 4427 | 3.932089 | GAGAAGAGTGGACAAGATTCAGC | 59.068 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
2703 | 5582 | 7.389053 | CCTATACTAACCAAGATTTCATGCCTC | 59.611 | 40.741 | 0.00 | 0.00 | 0.00 | 4.70 |
2746 | 5712 | 2.548057 | ACATGTGTACTTCTTGCCAACG | 59.452 | 45.455 | 0.00 | 0.00 | 0.00 | 4.10 |
2753 | 5719 | 6.357367 | AGAAACAAGGACATGTGTACTTCTT | 58.643 | 36.000 | 1.15 | 4.96 | 45.68 | 2.52 |
2937 | 6592 | 5.711976 | AGTTATGCAGCCTTGAACTAATGTT | 59.288 | 36.000 | 0.00 | 0.00 | 39.42 | 2.71 |
2938 | 6593 | 5.124457 | CAGTTATGCAGCCTTGAACTAATGT | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2939 | 6594 | 5.355071 | TCAGTTATGCAGCCTTGAACTAATG | 59.645 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2940 | 6595 | 5.500234 | TCAGTTATGCAGCCTTGAACTAAT | 58.500 | 37.500 | 0.00 | 0.00 | 0.00 | 1.73 |
2965 | 6620 | 9.768662 | AATGGCAAATGATTTACAGGAATTATC | 57.231 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
2998 | 6656 | 2.030946 | CCTGAAGTGATCGCCGATTTTC | 59.969 | 50.000 | 0.00 | 6.98 | 0.00 | 2.29 |
3022 | 6680 | 1.813513 | ATGGCGAAACTTCTCACCAG | 58.186 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3534 | 7384 | 5.527214 | TCACAACCAAGAGTCAACATACAAG | 59.473 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3569 | 7714 | 7.650890 | TCAGTAACAGTACAAGTACGATTCAA | 58.349 | 34.615 | 4.85 | 0.00 | 40.80 | 2.69 |
3719 | 8164 | 6.185114 | TGTGATGGGAATTTTGTTTCCAAT | 57.815 | 33.333 | 5.65 | 0.00 | 45.89 | 3.16 |
3720 | 8165 | 5.620738 | TGTGATGGGAATTTTGTTTCCAA | 57.379 | 34.783 | 5.65 | 0.00 | 45.89 | 3.53 |
4798 | 9411 | 1.331756 | GATGGAATGCACTTGGCTACG | 59.668 | 52.381 | 0.00 | 0.00 | 45.15 | 3.51 |
4804 | 9418 | 3.126514 | GTCAGTCAGATGGAATGCACTTG | 59.873 | 47.826 | 0.00 | 0.00 | 41.27 | 3.16 |
4807 | 9421 | 2.703416 | TGTCAGTCAGATGGAATGCAC | 58.297 | 47.619 | 0.00 | 0.00 | 41.27 | 4.57 |
4998 | 9618 | 6.295039 | GAGCATATCTCGATAGCTACTACC | 57.705 | 45.833 | 0.00 | 0.00 | 32.18 | 3.18 |
5072 | 9701 | 5.082251 | TGAATCACTGACATCTTCCAGAG | 57.918 | 43.478 | 0.00 | 0.00 | 34.65 | 3.35 |
5113 | 9751 | 1.199789 | TGCATTGGAAATCAGCACGAC | 59.800 | 47.619 | 0.00 | 0.00 | 0.00 | 4.34 |
5211 | 9856 | 3.112709 | GTGAACCGACGAGCTGGC | 61.113 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
5745 | 10886 | 7.480810 | CAATTGAATTTCTGCATCAGAGATCA | 58.519 | 34.615 | 0.00 | 3.36 | 41.75 | 2.92 |
5810 | 10957 | 8.293699 | TCTCTGCTTCATTACTGTATTCACTA | 57.706 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
5902 | 11085 | 6.073276 | TGCGTATATATGCCAAACTGATCAAC | 60.073 | 38.462 | 21.47 | 0.00 | 37.41 | 3.18 |
6037 | 11220 | 1.519719 | CAGGGTAGCCAGCAGAGAC | 59.480 | 63.158 | 14.62 | 0.00 | 0.00 | 3.36 |
6099 | 11282 | 3.548162 | AGTACCAGGCGGGGTAATATA | 57.452 | 47.619 | 8.94 | 0.00 | 44.66 | 0.86 |
6115 | 11298 | 7.725818 | AGGTTAAACAGCTTCAAAGTAGTAC | 57.274 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
6126 | 11309 | 6.003950 | TCATAAGCAGAAGGTTAAACAGCTT | 58.996 | 36.000 | 14.11 | 14.11 | 46.34 | 3.74 |
6127 | 11310 | 5.560724 | TCATAAGCAGAAGGTTAAACAGCT | 58.439 | 37.500 | 0.00 | 0.00 | 40.69 | 4.24 |
6128 | 11311 | 5.880054 | TCATAAGCAGAAGGTTAAACAGC | 57.120 | 39.130 | 0.00 | 0.00 | 40.69 | 4.40 |
6147 | 11330 | 5.518848 | TGTTGTGATTCAAACAGCTTCAT | 57.481 | 34.783 | 9.09 | 0.00 | 37.81 | 2.57 |
6172 | 11355 | 2.940994 | TGCAAAGTAGTACCAGCCAA | 57.059 | 45.000 | 0.00 | 0.00 | 0.00 | 4.52 |
6198 | 11381 | 3.259123 | GGACGGAGGGAGTAGTTTTTACA | 59.741 | 47.826 | 0.00 | 0.00 | 0.00 | 2.41 |
6199 | 11382 | 3.368843 | GGGACGGAGGGAGTAGTTTTTAC | 60.369 | 52.174 | 0.00 | 0.00 | 0.00 | 2.01 |
6264 | 11476 | 3.403038 | CCTCTGCCCCATATTTAAGACG | 58.597 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
6271 | 11483 | 2.815357 | TACTCCCTCTGCCCCATATT | 57.185 | 50.000 | 0.00 | 0.00 | 0.00 | 1.28 |
6279 | 11492 | 5.488341 | TGTTTTAACTCATACTCCCTCTGC | 58.512 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
6312 | 11527 | 9.665719 | AAGTTGTTTTACAATCCTCACAAAAAT | 57.334 | 25.926 | 0.00 | 0.00 | 40.59 | 1.82 |
6313 | 11528 | 8.930760 | CAAGTTGTTTTACAATCCTCACAAAAA | 58.069 | 29.630 | 0.00 | 0.00 | 40.59 | 1.94 |
6314 | 11529 | 8.091449 | ACAAGTTGTTTTACAATCCTCACAAAA | 58.909 | 29.630 | 1.64 | 0.00 | 40.59 | 2.44 |
6318 | 11533 | 7.449934 | CAACAAGTTGTTTTACAATCCTCAC | 57.550 | 36.000 | 18.59 | 0.00 | 40.59 | 3.51 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.