Multiple sequence alignment - TraesCS6B01G079400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G079400 chr6B 100.000 4324 0 0 1 4324 55993356 55997679 0.000000e+00 7986.0
1 TraesCS6B01G079400 chr6B 92.308 104 5 3 634 736 65452600 65452499 1.250000e-30 145.0
2 TraesCS6B01G079400 chr6A 91.821 2800 186 27 1544 4324 31352749 31355524 0.000000e+00 3862.0
3 TraesCS6B01G079400 chr6A 88.376 671 42 20 740 1385 31351871 31352530 0.000000e+00 774.0
4 TraesCS6B01G079400 chrUn 91.390 2799 166 32 1545 4324 103782451 103785193 0.000000e+00 3764.0
5 TraesCS6B01G079400 chrUn 89.106 716 47 16 730 1418 103781571 103782282 0.000000e+00 861.0
6 TraesCS6B01G079400 chrUn 89.759 332 25 5 317 639 103780406 103780737 2.410000e-112 416.0
7 TraesCS6B01G079400 chr4D 83.388 307 31 19 4 299 254268284 254267987 2.560000e-67 267.0
8 TraesCS6B01G079400 chr4D 92.216 167 6 5 154 315 239576311 239576147 3.360000e-56 230.0
9 TraesCS6B01G079400 chr4D 92.216 167 6 5 154 315 239585520 239585356 3.360000e-56 230.0
10 TraesCS6B01G079400 chr4D 90.090 111 7 4 629 736 119412677 119412786 1.620000e-29 141.0
11 TraesCS6B01G079400 chr5D 95.152 165 3 4 1 163 341645523 341645362 5.550000e-64 255.0
12 TraesCS6B01G079400 chr5D 93.939 165 5 3 1 163 523589951 523589790 1.200000e-60 244.0
13 TraesCS6B01G079400 chr5D 91.860 172 7 5 154 320 341645308 341645139 2.600000e-57 233.0
14 TraesCS6B01G079400 chr5D 92.169 166 7 5 154 315 116051645 116051482 3.360000e-56 230.0
15 TraesCS6B01G079400 chr5D 96.703 91 3 0 647 737 49290750 49290840 7.490000e-33 152.0
16 TraesCS6B01G079400 chr2B 95.152 165 3 5 1 163 326398347 326398186 5.550000e-64 255.0
17 TraesCS6B01G079400 chr2D 94.545 165 4 3 1 163 151750255 151750416 2.580000e-62 250.0
18 TraesCS6B01G079400 chr2D 94.545 165 4 3 1 163 518560397 518560236 2.580000e-62 250.0
19 TraesCS6B01G079400 chr5B 94.512 164 4 3 1 162 388329471 388329631 9.290000e-62 248.0
20 TraesCS6B01G079400 chr7D 93.939 165 5 3 1 163 301598797 301598958 1.200000e-60 244.0
21 TraesCS6B01G079400 chr7D 92.771 166 6 4 154 315 361188382 361188545 7.230000e-58 235.0
22 TraesCS6B01G079400 chr7D 91.279 172 7 6 154 319 103099169 103099338 1.210000e-55 228.0
23 TraesCS6B01G079400 chr7D 90.000 180 8 7 141 315 103048491 103048665 1.560000e-54 224.0
24 TraesCS6B01G079400 chr6D 93.939 165 5 3 1 163 381075412 381075251 1.200000e-60 244.0
25 TraesCS6B01G079400 chr6D 88.525 122 8 6 622 737 446513161 446513282 4.510000e-30 143.0
26 TraesCS6B01G079400 chr4B 92.169 166 7 6 154 315 419429816 419429979 3.360000e-56 230.0
27 TraesCS6B01G079400 chr4B 98.889 90 1 0 648 737 53486549 53486460 1.240000e-35 161.0
28 TraesCS6B01G079400 chr1A 97.778 90 2 0 647 736 69995883 69995972 5.790000e-34 156.0
29 TraesCS6B01G079400 chr1A 89.062 128 8 6 619 741 327008588 327008714 2.080000e-33 154.0
30 TraesCS6B01G079400 chr1A 93.333 105 4 3 642 744 409787008 409786905 7.490000e-33 152.0
31 TraesCS6B01G079400 chr4A 89.744 117 9 3 648 761 589084856 589084972 3.480000e-31 147.0
32 TraesCS6B01G079400 chr1B 85.263 95 13 1 442 535 616311263 616311357 3.560000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G079400 chr6B 55993356 55997679 4323 False 7986.000000 7986 100.0000 1 4324 1 chr6B.!!$F1 4323
1 TraesCS6B01G079400 chr6A 31351871 31355524 3653 False 2318.000000 3862 90.0985 740 4324 2 chr6A.!!$F1 3584
2 TraesCS6B01G079400 chrUn 103780406 103785193 4787 False 1680.333333 3764 90.0850 317 4324 3 chrUn.!!$F1 4007

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.105913 GGGGTGGTCCAAGGTTCAAA 60.106 55.0 0.00 0.0 37.22 2.69 F
312 313 0.112995 AGGCAAAATCCAGGCTGTCA 59.887 50.0 14.43 0.0 39.39 3.58 F
313 314 0.244721 GGCAAAATCCAGGCTGTCAC 59.755 55.0 14.43 0.0 0.00 3.67 F
1327 2122 0.442699 GAGGTCGATTTGCGTTGTCC 59.557 55.0 0.00 0.0 41.80 4.02 F
2342 3235 0.392998 CTCCATTTCCACCACCCTCG 60.393 60.0 0.00 0.0 0.00 4.63 F
3059 3952 0.098376 ATGGTACGAACTCGCGTCTC 59.902 55.0 5.77 0.0 44.39 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1309 2104 0.034896 AGGACAACGCAAATCGACCT 59.965 50.0 0.00 0.00 41.67 3.85 R
1423 2219 0.101399 ATCGACGACATCACTCAGGC 59.899 55.0 0.00 0.00 0.00 4.85 R
2249 3142 0.534877 ACTTCATTGTCACGGCAGCA 60.535 50.0 0.00 0.00 0.00 4.41 R
2915 3808 0.109412 GTCTTGCATGCAGGTCAAGC 60.109 55.0 26.79 16.25 39.66 4.01 R
3177 4071 0.250467 ACACGCTGCATGAGAAAGGT 60.250 50.0 1.44 0.00 0.00 3.50 R
3911 4813 1.090728 TGAATATGCGCGCCTTTTGA 58.909 45.0 30.77 11.81 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 6.636666 AAAGTCATGCAATATTTTTGCTCG 57.363 33.333 12.12 4.65 45.13 5.03
50 51 4.675510 AGTCATGCAATATTTTTGCTCGG 58.324 39.130 12.12 3.51 45.13 4.63
51 52 3.798337 GTCATGCAATATTTTTGCTCGGG 59.202 43.478 12.12 0.00 45.13 5.14
52 53 2.957491 TGCAATATTTTTGCTCGGGG 57.043 45.000 12.12 0.00 45.13 5.73
53 54 2.451490 TGCAATATTTTTGCTCGGGGA 58.549 42.857 12.12 0.00 45.13 4.81
54 55 3.030291 TGCAATATTTTTGCTCGGGGAT 58.970 40.909 12.12 0.00 45.13 3.85
55 56 3.181477 TGCAATATTTTTGCTCGGGGATG 60.181 43.478 12.12 0.00 45.13 3.51
56 57 3.799917 GCAATATTTTTGCTCGGGGATGG 60.800 47.826 4.78 0.00 41.87 3.51
57 58 2.065899 TATTTTTGCTCGGGGATGGG 57.934 50.000 0.00 0.00 0.00 4.00
58 59 0.687427 ATTTTTGCTCGGGGATGGGG 60.687 55.000 0.00 0.00 0.00 4.96
59 60 2.087857 TTTTTGCTCGGGGATGGGGT 62.088 55.000 0.00 0.00 0.00 4.95
60 61 2.779742 TTTTGCTCGGGGATGGGGTG 62.780 60.000 0.00 0.00 0.00 4.61
63 64 3.480133 CTCGGGGATGGGGTGGTC 61.480 72.222 0.00 0.00 0.00 4.02
66 67 2.944390 GGGGATGGGGTGGTCCAA 60.944 66.667 0.00 0.00 40.62 3.53
67 68 2.683475 GGGATGGGGTGGTCCAAG 59.317 66.667 0.00 0.00 40.62 3.61
68 69 2.683475 GGATGGGGTGGTCCAAGG 59.317 66.667 0.00 0.00 40.62 3.61
69 70 2.238701 GGATGGGGTGGTCCAAGGT 61.239 63.158 0.00 0.00 40.62 3.50
70 71 1.774300 GATGGGGTGGTCCAAGGTT 59.226 57.895 0.00 0.00 40.62 3.50
71 72 0.323451 GATGGGGTGGTCCAAGGTTC 60.323 60.000 0.00 0.00 40.62 3.62
72 73 1.071314 ATGGGGTGGTCCAAGGTTCA 61.071 55.000 0.00 0.00 40.62 3.18
73 74 1.289982 TGGGGTGGTCCAAGGTTCAA 61.290 55.000 0.00 0.00 37.22 2.69
74 75 0.105913 GGGGTGGTCCAAGGTTCAAA 60.106 55.000 0.00 0.00 37.22 2.69
75 76 1.328279 GGGTGGTCCAAGGTTCAAAG 58.672 55.000 0.00 0.00 35.00 2.77
76 77 1.133606 GGGTGGTCCAAGGTTCAAAGA 60.134 52.381 0.00 0.00 35.00 2.52
77 78 2.661718 GGTGGTCCAAGGTTCAAAGAA 58.338 47.619 0.00 0.00 0.00 2.52
78 79 3.230976 GGTGGTCCAAGGTTCAAAGAAT 58.769 45.455 0.00 0.00 0.00 2.40
79 80 4.403734 GGTGGTCCAAGGTTCAAAGAATA 58.596 43.478 0.00 0.00 0.00 1.75
80 81 5.016831 GGTGGTCCAAGGTTCAAAGAATAT 58.983 41.667 0.00 0.00 0.00 1.28
81 82 5.480422 GGTGGTCCAAGGTTCAAAGAATATT 59.520 40.000 0.00 0.00 0.00 1.28
82 83 6.350194 GGTGGTCCAAGGTTCAAAGAATATTC 60.350 42.308 7.41 7.41 0.00 1.75
83 84 6.208599 GTGGTCCAAGGTTCAAAGAATATTCA 59.791 38.462 17.56 0.00 0.00 2.57
84 85 6.434028 TGGTCCAAGGTTCAAAGAATATTCAG 59.566 38.462 17.56 7.15 0.00 3.02
85 86 6.127619 GGTCCAAGGTTCAAAGAATATTCAGG 60.128 42.308 17.56 6.48 0.00 3.86
86 87 6.659242 GTCCAAGGTTCAAAGAATATTCAGGA 59.341 38.462 17.56 8.60 0.00 3.86
87 88 7.176690 GTCCAAGGTTCAAAGAATATTCAGGAA 59.823 37.037 17.56 13.50 0.00 3.36
88 89 7.895429 TCCAAGGTTCAAAGAATATTCAGGAAT 59.105 33.333 17.56 0.00 34.93 3.01
89 90 8.534496 CCAAGGTTCAAAGAATATTCAGGAATT 58.466 33.333 17.56 7.28 32.50 2.17
106 107 9.532494 TTCAGGAATTATCTCAAGATTTTTGGA 57.468 29.630 0.00 0.00 36.05 3.53
107 108 9.182214 TCAGGAATTATCTCAAGATTTTTGGAG 57.818 33.333 0.00 0.00 36.05 3.86
108 109 7.919621 CAGGAATTATCTCAAGATTTTTGGAGC 59.080 37.037 0.00 0.00 36.05 4.70
109 110 7.616935 AGGAATTATCTCAAGATTTTTGGAGCA 59.383 33.333 0.00 0.00 36.05 4.26
110 111 8.253113 GGAATTATCTCAAGATTTTTGGAGCAA 58.747 33.333 0.00 0.00 36.05 3.91
111 112 9.813446 GAATTATCTCAAGATTTTTGGAGCAAT 57.187 29.630 0.00 0.00 36.05 3.56
119 120 9.775854 TCAAGATTTTTGGAGCAATAAAAATGA 57.224 25.926 16.86 10.30 35.65 2.57
121 122 8.782339 AGATTTTTGGAGCAATAAAAATGAGG 57.218 30.769 16.86 0.00 35.65 3.86
122 123 7.825761 AGATTTTTGGAGCAATAAAAATGAGGG 59.174 33.333 16.86 0.00 35.65 4.30
123 124 6.432403 TTTTGGAGCAATAAAAATGAGGGT 57.568 33.333 0.00 0.00 0.00 4.34
124 125 6.432403 TTTGGAGCAATAAAAATGAGGGTT 57.568 33.333 0.00 0.00 0.00 4.11
125 126 5.404466 TGGAGCAATAAAAATGAGGGTTG 57.596 39.130 0.00 0.00 0.00 3.77
126 127 4.183865 GGAGCAATAAAAATGAGGGTTGC 58.816 43.478 0.00 0.00 41.50 4.17
130 131 5.930405 GCAATAAAAATGAGGGTTGCTTTG 58.070 37.500 0.00 0.00 38.97 2.77
131 132 5.106594 GCAATAAAAATGAGGGTTGCTTTGG 60.107 40.000 0.00 0.00 38.97 3.28
132 133 6.229733 CAATAAAAATGAGGGTTGCTTTGGA 58.770 36.000 0.00 0.00 0.00 3.53
133 134 4.341366 AAAAATGAGGGTTGCTTTGGAG 57.659 40.909 0.00 0.00 0.00 3.86
148 149 4.887748 CTTTGGAGCACTAGTTTCTGAGA 58.112 43.478 0.00 0.00 0.00 3.27
149 150 5.486526 CTTTGGAGCACTAGTTTCTGAGAT 58.513 41.667 0.00 0.00 0.00 2.75
150 151 4.462508 TGGAGCACTAGTTTCTGAGATG 57.537 45.455 0.00 0.00 0.00 2.90
151 152 4.089361 TGGAGCACTAGTTTCTGAGATGA 58.911 43.478 0.00 0.00 0.00 2.92
152 153 4.159321 TGGAGCACTAGTTTCTGAGATGAG 59.841 45.833 0.00 0.00 0.00 2.90
153 154 4.159506 GGAGCACTAGTTTCTGAGATGAGT 59.840 45.833 0.00 0.00 0.00 3.41
154 155 5.337169 GGAGCACTAGTTTCTGAGATGAGTT 60.337 44.000 0.00 0.00 0.00 3.01
155 156 6.107901 AGCACTAGTTTCTGAGATGAGTTT 57.892 37.500 0.00 0.00 0.00 2.66
156 157 6.162777 AGCACTAGTTTCTGAGATGAGTTTC 58.837 40.000 0.00 0.00 0.00 2.78
157 158 5.928839 GCACTAGTTTCTGAGATGAGTTTCA 59.071 40.000 0.00 0.00 0.00 2.69
158 159 6.090628 GCACTAGTTTCTGAGATGAGTTTCAG 59.909 42.308 0.00 0.00 41.67 3.02
159 160 7.374272 CACTAGTTTCTGAGATGAGTTTCAGA 58.626 38.462 0.00 0.35 45.89 3.27
166 167 7.902387 TCTGAGATGAGTTTCAGAAGAAATG 57.098 36.000 1.96 0.00 44.92 2.32
167 168 7.448420 TCTGAGATGAGTTTCAGAAGAAATGT 58.552 34.615 1.96 0.00 44.92 2.71
168 169 7.387122 TCTGAGATGAGTTTCAGAAGAAATGTG 59.613 37.037 1.96 0.00 44.92 3.21
169 170 7.219322 TGAGATGAGTTTCAGAAGAAATGTGA 58.781 34.615 0.00 0.00 44.87 3.58
170 171 7.881751 TGAGATGAGTTTCAGAAGAAATGTGAT 59.118 33.333 0.00 0.00 44.87 3.06
171 172 8.632906 AGATGAGTTTCAGAAGAAATGTGATT 57.367 30.769 0.00 0.00 44.87 2.57
172 173 8.512956 AGATGAGTTTCAGAAGAAATGTGATTG 58.487 33.333 0.00 0.00 44.87 2.67
173 174 7.806409 TGAGTTTCAGAAGAAATGTGATTGA 57.194 32.000 0.00 0.00 44.87 2.57
174 175 8.224389 TGAGTTTCAGAAGAAATGTGATTGAA 57.776 30.769 0.00 0.00 44.87 2.69
175 176 8.853126 TGAGTTTCAGAAGAAATGTGATTGAAT 58.147 29.630 0.00 0.00 44.87 2.57
176 177 9.125906 GAGTTTCAGAAGAAATGTGATTGAATG 57.874 33.333 0.00 0.00 44.87 2.67
177 178 8.853126 AGTTTCAGAAGAAATGTGATTGAATGA 58.147 29.630 0.00 0.00 44.87 2.57
178 179 9.125906 GTTTCAGAAGAAATGTGATTGAATGAG 57.874 33.333 0.00 0.00 44.87 2.90
179 180 8.625786 TTCAGAAGAAATGTGATTGAATGAGA 57.374 30.769 0.00 0.00 30.36 3.27
180 181 8.265165 TCAGAAGAAATGTGATTGAATGAGAG 57.735 34.615 0.00 0.00 0.00 3.20
181 182 7.336176 TCAGAAGAAATGTGATTGAATGAGAGG 59.664 37.037 0.00 0.00 0.00 3.69
182 183 7.120873 CAGAAGAAATGTGATTGAATGAGAGGT 59.879 37.037 0.00 0.00 0.00 3.85
183 184 8.324306 AGAAGAAATGTGATTGAATGAGAGGTA 58.676 33.333 0.00 0.00 0.00 3.08
184 185 8.503458 AAGAAATGTGATTGAATGAGAGGTAG 57.497 34.615 0.00 0.00 0.00 3.18
185 186 7.855375 AGAAATGTGATTGAATGAGAGGTAGA 58.145 34.615 0.00 0.00 0.00 2.59
186 187 8.492782 AGAAATGTGATTGAATGAGAGGTAGAT 58.507 33.333 0.00 0.00 0.00 1.98
187 188 8.447924 AAATGTGATTGAATGAGAGGTAGATG 57.552 34.615 0.00 0.00 0.00 2.90
188 189 5.922053 TGTGATTGAATGAGAGGTAGATGG 58.078 41.667 0.00 0.00 0.00 3.51
189 190 5.163269 TGTGATTGAATGAGAGGTAGATGGG 60.163 44.000 0.00 0.00 0.00 4.00
190 191 4.971282 TGATTGAATGAGAGGTAGATGGGT 59.029 41.667 0.00 0.00 0.00 4.51
191 192 5.070981 TGATTGAATGAGAGGTAGATGGGTC 59.929 44.000 0.00 0.00 0.00 4.46
192 193 3.994317 TGAATGAGAGGTAGATGGGTCA 58.006 45.455 0.00 0.00 0.00 4.02
193 194 3.706594 TGAATGAGAGGTAGATGGGTCAC 59.293 47.826 0.00 0.00 0.00 3.67
194 195 3.697190 ATGAGAGGTAGATGGGTCACT 57.303 47.619 0.00 0.00 0.00 3.41
195 196 3.474798 TGAGAGGTAGATGGGTCACTT 57.525 47.619 0.00 0.00 0.00 3.16
196 197 3.099905 TGAGAGGTAGATGGGTCACTTG 58.900 50.000 0.00 0.00 0.00 3.16
197 198 2.432510 GAGAGGTAGATGGGTCACTTGG 59.567 54.545 0.00 0.00 0.00 3.61
198 199 1.486726 GAGGTAGATGGGTCACTTGGG 59.513 57.143 0.00 0.00 0.00 4.12
199 200 1.203440 AGGTAGATGGGTCACTTGGGT 60.203 52.381 0.00 0.00 0.00 4.51
200 201 1.065418 GGTAGATGGGTCACTTGGGTG 60.065 57.143 0.00 0.00 44.23 4.61
211 212 1.956477 CACTTGGGTGAAAGTCAAGGG 59.044 52.381 0.00 0.00 45.61 3.95
212 213 0.961753 CTTGGGTGAAAGTCAAGGGC 59.038 55.000 0.00 0.00 35.53 5.19
213 214 0.260230 TTGGGTGAAAGTCAAGGGCA 59.740 50.000 0.00 0.00 0.00 5.36
214 215 0.482446 TGGGTGAAAGTCAAGGGCAT 59.518 50.000 0.00 0.00 0.00 4.40
215 216 0.890683 GGGTGAAAGTCAAGGGCATG 59.109 55.000 0.00 0.00 0.00 4.06
216 217 0.244721 GGTGAAAGTCAAGGGCATGC 59.755 55.000 9.90 9.90 0.00 4.06
217 218 1.251251 GTGAAAGTCAAGGGCATGCT 58.749 50.000 18.92 0.00 0.00 3.79
218 219 1.200948 GTGAAAGTCAAGGGCATGCTC 59.799 52.381 18.92 15.06 0.00 4.26
219 220 1.202915 TGAAAGTCAAGGGCATGCTCA 60.203 47.619 22.09 8.40 0.00 4.26
220 221 1.888512 GAAAGTCAAGGGCATGCTCAA 59.111 47.619 22.09 1.12 0.00 3.02
221 222 1.542492 AAGTCAAGGGCATGCTCAAG 58.458 50.000 22.09 11.83 0.00 3.02
222 223 0.403271 AGTCAAGGGCATGCTCAAGT 59.597 50.000 22.09 4.67 0.00 3.16
223 224 0.524862 GTCAAGGGCATGCTCAAGTG 59.475 55.000 22.09 14.61 0.00 3.16
224 225 0.401356 TCAAGGGCATGCTCAAGTGA 59.599 50.000 22.09 16.76 0.00 3.41
225 226 1.005097 TCAAGGGCATGCTCAAGTGAT 59.995 47.619 22.09 0.00 0.00 3.06
226 227 2.239402 TCAAGGGCATGCTCAAGTGATA 59.761 45.455 22.09 0.00 0.00 2.15
227 228 3.018856 CAAGGGCATGCTCAAGTGATAA 58.981 45.455 22.09 0.00 0.00 1.75
228 229 2.928334 AGGGCATGCTCAAGTGATAAG 58.072 47.619 22.09 0.00 0.00 1.73
229 230 2.240667 AGGGCATGCTCAAGTGATAAGT 59.759 45.455 22.09 0.00 0.00 2.24
230 231 2.615912 GGGCATGCTCAAGTGATAAGTC 59.384 50.000 18.92 0.00 0.00 3.01
231 232 2.615912 GGCATGCTCAAGTGATAAGTCC 59.384 50.000 18.92 0.00 0.00 3.85
232 233 3.273434 GCATGCTCAAGTGATAAGTCCA 58.727 45.455 11.37 0.00 0.00 4.02
233 234 3.881688 GCATGCTCAAGTGATAAGTCCAT 59.118 43.478 11.37 0.00 0.00 3.41
234 235 4.337555 GCATGCTCAAGTGATAAGTCCATT 59.662 41.667 11.37 0.00 0.00 3.16
235 236 5.163581 GCATGCTCAAGTGATAAGTCCATTT 60.164 40.000 11.37 0.00 0.00 2.32
236 237 5.885230 TGCTCAAGTGATAAGTCCATTTG 57.115 39.130 0.00 0.00 34.04 2.32
237 238 5.559770 TGCTCAAGTGATAAGTCCATTTGA 58.440 37.500 0.00 0.00 37.73 2.69
238 239 6.003326 TGCTCAAGTGATAAGTCCATTTGAA 58.997 36.000 0.00 0.00 38.93 2.69
239 240 6.660521 TGCTCAAGTGATAAGTCCATTTGAAT 59.339 34.615 0.00 0.00 38.93 2.57
240 241 7.177216 TGCTCAAGTGATAAGTCCATTTGAATT 59.823 33.333 0.00 0.00 38.93 2.17
241 242 7.487189 GCTCAAGTGATAAGTCCATTTGAATTG 59.513 37.037 0.00 0.00 38.93 2.32
242 243 8.634335 TCAAGTGATAAGTCCATTTGAATTGA 57.366 30.769 0.00 0.00 37.33 2.57
243 244 9.246670 TCAAGTGATAAGTCCATTTGAATTGAT 57.753 29.630 0.00 0.00 37.33 2.57
244 245 9.865321 CAAGTGATAAGTCCATTTGAATTGATT 57.135 29.630 0.00 0.00 34.46 2.57
246 247 9.471702 AGTGATAAGTCCATTTGAATTGATTCT 57.528 29.630 5.42 0.00 37.67 2.40
271 272 6.419484 AAAAACTCAAATCCAAGGTAAGGG 57.581 37.500 0.00 0.00 0.00 3.95
272 273 3.087370 ACTCAAATCCAAGGTAAGGGC 57.913 47.619 0.00 0.00 0.00 5.19
273 274 2.378547 ACTCAAATCCAAGGTAAGGGCA 59.621 45.455 0.00 0.00 0.00 5.36
274 275 3.181423 ACTCAAATCCAAGGTAAGGGCAA 60.181 43.478 0.00 0.00 0.00 4.52
275 276 3.831911 CTCAAATCCAAGGTAAGGGCAAA 59.168 43.478 0.00 0.00 0.00 3.68
276 277 4.424842 TCAAATCCAAGGTAAGGGCAAAT 58.575 39.130 0.00 0.00 0.00 2.32
277 278 4.466015 TCAAATCCAAGGTAAGGGCAAATC 59.534 41.667 0.00 0.00 0.00 2.17
278 279 3.756082 ATCCAAGGTAAGGGCAAATCA 57.244 42.857 0.00 0.00 0.00 2.57
279 280 3.534357 TCCAAGGTAAGGGCAAATCAA 57.466 42.857 0.00 0.00 0.00 2.57
280 281 3.430453 TCCAAGGTAAGGGCAAATCAAG 58.570 45.455 0.00 0.00 0.00 3.02
281 282 3.165071 CCAAGGTAAGGGCAAATCAAGT 58.835 45.455 0.00 0.00 0.00 3.16
282 283 3.193479 CCAAGGTAAGGGCAAATCAAGTC 59.807 47.826 0.00 0.00 0.00 3.01
283 284 3.087370 AGGTAAGGGCAAATCAAGTCC 57.913 47.619 0.00 0.00 0.00 3.85
284 285 1.743394 GGTAAGGGCAAATCAAGTCCG 59.257 52.381 0.00 0.00 35.42 4.79
285 286 1.743394 GTAAGGGCAAATCAAGTCCGG 59.257 52.381 0.00 0.00 35.42 5.14
286 287 0.404040 AAGGGCAAATCAAGTCCGGA 59.596 50.000 0.00 0.00 35.42 5.14
287 288 0.404040 AGGGCAAATCAAGTCCGGAA 59.596 50.000 5.23 0.00 35.42 4.30
288 289 1.203001 AGGGCAAATCAAGTCCGGAAA 60.203 47.619 5.23 0.00 35.42 3.13
289 290 1.616374 GGGCAAATCAAGTCCGGAAAA 59.384 47.619 5.23 0.00 0.00 2.29
290 291 2.036604 GGGCAAATCAAGTCCGGAAAAA 59.963 45.455 5.23 0.00 0.00 1.94
309 310 2.845363 AAAAGGCAAAATCCAGGCTG 57.155 45.000 7.75 7.75 40.84 4.85
310 311 1.720781 AAAGGCAAAATCCAGGCTGT 58.279 45.000 14.43 0.00 40.84 4.40
311 312 1.260544 AAGGCAAAATCCAGGCTGTC 58.739 50.000 14.43 0.00 40.84 3.51
312 313 0.112995 AGGCAAAATCCAGGCTGTCA 59.887 50.000 14.43 0.00 39.39 3.58
313 314 0.244721 GGCAAAATCCAGGCTGTCAC 59.755 55.000 14.43 0.00 0.00 3.67
314 315 0.961019 GCAAAATCCAGGCTGTCACA 59.039 50.000 14.43 0.00 0.00 3.58
315 316 1.547372 GCAAAATCCAGGCTGTCACAT 59.453 47.619 14.43 0.00 0.00 3.21
344 345 4.266714 TCCGCCGAATCCTTCTTTATTTT 58.733 39.130 0.00 0.00 0.00 1.82
360 361 8.718102 TCTTTATTTTTAGGAATCGGTCAGAG 57.282 34.615 0.00 0.00 0.00 3.35
366 368 0.744771 GGAATCGGTCAGAGTTGCCC 60.745 60.000 0.00 0.00 0.00 5.36
388 390 4.854042 GGGTTACCCTCTCCCCAT 57.146 61.111 14.22 0.00 41.34 4.00
389 391 2.231642 GGGTTACCCTCTCCCCATG 58.768 63.158 14.22 0.00 41.34 3.66
401 403 3.091545 TCTCCCCATGATCAACTTTTGC 58.908 45.455 0.00 0.00 0.00 3.68
404 406 1.135024 CCCATGATCAACTTTTGCCCG 60.135 52.381 0.00 0.00 0.00 6.13
425 427 2.503356 GGCAAGAAAGAGAGAGGGATCA 59.497 50.000 0.00 0.00 0.00 2.92
449 451 2.616510 GCATTTGCTACACACTCCCTCT 60.617 50.000 0.00 0.00 38.21 3.69
467 469 5.647658 TCCCTCTGTTGCTAAATACAATGTG 59.352 40.000 0.00 0.00 0.00 3.21
471 473 7.867403 CCTCTGTTGCTAAATACAATGTGTTTT 59.133 33.333 13.04 7.28 30.19 2.43
488 490 9.912634 AATGTGTTTTCGAGATTTCAATACAAT 57.087 25.926 0.00 0.00 0.00 2.71
551 561 5.779806 ATGTCTTTACACGTAGTTCATGC 57.220 39.130 0.00 0.00 41.61 4.06
569 579 3.641437 TGCCGAAATCTTTGAAAGGTG 57.359 42.857 4.94 0.00 0.00 4.00
598 608 5.848833 TTTAGAAACGGAGGGAGTAGATC 57.151 43.478 0.00 0.00 0.00 2.75
609 619 2.106166 GGGAGTAGATCGGAGTACCTCA 59.894 54.545 0.56 0.00 31.08 3.86
612 622 4.004982 GAGTAGATCGGAGTACCTCATCC 58.995 52.174 0.00 0.00 31.08 3.51
724 734 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
725 735 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
726 736 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
1168 1948 2.365635 CCATCCTCGGGACCAGGT 60.366 66.667 0.00 0.00 32.98 4.00
1286 2073 2.588146 CTTGCCAGCTCCGAAATGCG 62.588 60.000 0.00 0.00 40.47 4.73
1299 2090 2.483013 CGAAATGCGTGGAAGAGGGATA 60.483 50.000 0.00 0.00 34.64 2.59
1304 2095 2.222027 GCGTGGAAGAGGGATAATTGG 58.778 52.381 0.00 0.00 0.00 3.16
1307 2102 4.067896 CGTGGAAGAGGGATAATTGGATG 58.932 47.826 0.00 0.00 0.00 3.51
1309 2104 4.104738 GTGGAAGAGGGATAATTGGATGGA 59.895 45.833 0.00 0.00 0.00 3.41
1310 2105 4.352001 TGGAAGAGGGATAATTGGATGGAG 59.648 45.833 0.00 0.00 0.00 3.86
1312 2107 3.959920 AGAGGGATAATTGGATGGAGGT 58.040 45.455 0.00 0.00 0.00 3.85
1313 2108 3.913163 AGAGGGATAATTGGATGGAGGTC 59.087 47.826 0.00 0.00 0.00 3.85
1315 2110 2.637872 GGGATAATTGGATGGAGGTCGA 59.362 50.000 0.00 0.00 0.00 4.20
1316 2111 3.264450 GGGATAATTGGATGGAGGTCGAT 59.736 47.826 0.00 0.00 0.00 3.59
1322 2117 0.462047 GGATGGAGGTCGATTTGCGT 60.462 55.000 0.00 0.00 41.80 5.24
1327 2122 0.442699 GAGGTCGATTTGCGTTGTCC 59.557 55.000 0.00 0.00 41.80 4.02
1332 2127 1.944024 TCGATTTGCGTTGTCCTTTGT 59.056 42.857 0.00 0.00 41.80 2.83
1333 2128 2.356382 TCGATTTGCGTTGTCCTTTGTT 59.644 40.909 0.00 0.00 41.80 2.83
1336 2131 1.757682 TTGCGTTGTCCTTTGTTCCT 58.242 45.000 0.00 0.00 0.00 3.36
1339 2134 2.103432 TGCGTTGTCCTTTGTTCCTAGA 59.897 45.455 0.00 0.00 0.00 2.43
1358 2153 3.652055 AGATAGTCACCTCCTGCAGATT 58.348 45.455 17.39 0.00 0.00 2.40
1362 2157 3.378512 AGTCACCTCCTGCAGATTCATA 58.621 45.455 17.39 0.00 0.00 2.15
1365 2160 3.519107 TCACCTCCTGCAGATTCATACAA 59.481 43.478 17.39 0.00 0.00 2.41
1367 2162 3.264193 ACCTCCTGCAGATTCATACAACA 59.736 43.478 17.39 0.00 0.00 3.33
1385 2181 9.338291 CATACAACATTTTGTCTGAGAATTCAG 57.662 33.333 8.44 0.00 42.67 3.02
1386 2182 6.742109 ACAACATTTTGTCTGAGAATTCAGG 58.258 36.000 8.44 0.00 42.67 3.86
1388 2184 7.232127 ACAACATTTTGTCTGAGAATTCAGGAT 59.768 33.333 8.44 0.00 42.67 3.24
1397 2193 1.845143 AGAATTCAGGATGCAGGAGCT 59.155 47.619 8.44 0.00 42.74 4.09
1408 2204 3.204306 TGCAGGAGCTAGAAATGATGG 57.796 47.619 0.00 0.00 42.74 3.51
1410 2206 3.711190 TGCAGGAGCTAGAAATGATGGTA 59.289 43.478 0.00 0.00 42.74 3.25
1411 2207 4.061596 GCAGGAGCTAGAAATGATGGTAC 58.938 47.826 0.00 0.00 37.91 3.34
1418 2214 6.763355 AGCTAGAAATGATGGTACGATGATT 58.237 36.000 0.00 0.00 0.00 2.57
1423 2219 6.936900 AGAAATGATGGTACGATGATTTAGGG 59.063 38.462 13.59 0.00 0.00 3.53
1424 2220 4.002906 TGATGGTACGATGATTTAGGGC 57.997 45.455 0.00 0.00 0.00 5.19
1426 2222 2.404559 TGGTACGATGATTTAGGGCCT 58.595 47.619 12.58 12.58 0.00 5.19
1427 2223 2.104111 TGGTACGATGATTTAGGGCCTG 59.896 50.000 18.53 0.00 0.00 4.85
1433 2232 3.244353 CGATGATTTAGGGCCTGAGTGAT 60.244 47.826 18.53 4.00 0.00 3.06
1434 2233 3.565764 TGATTTAGGGCCTGAGTGATG 57.434 47.619 18.53 0.00 0.00 3.07
1436 2235 3.118261 TGATTTAGGGCCTGAGTGATGTC 60.118 47.826 18.53 3.64 0.00 3.06
1448 2258 3.243068 TGAGTGATGTCGTCGATACCATG 60.243 47.826 0.00 0.00 0.00 3.66
1455 2265 1.202371 TCGTCGATACCATGTTCAGCC 60.202 52.381 0.00 0.00 0.00 4.85
1458 2268 3.305403 CGTCGATACCATGTTCAGCCTAT 60.305 47.826 0.00 0.00 0.00 2.57
1463 2273 1.492176 ACCATGTTCAGCCTATCCCTG 59.508 52.381 0.00 0.00 0.00 4.45
1470 2280 2.995746 TCAGCCTATCCCTGGAATCAT 58.004 47.619 0.00 0.00 0.00 2.45
1485 2332 6.406624 CCTGGAATCATAATTCAGCTGCTTTT 60.407 38.462 9.47 4.88 42.66 2.27
1490 2337 2.712057 AATTCAGCTGCTTTTCACCG 57.288 45.000 9.47 0.00 0.00 4.94
1507 2354 1.303309 CCGATTGTGATTCCAGCTCC 58.697 55.000 0.00 0.00 0.00 4.70
1508 2355 0.933097 CGATTGTGATTCCAGCTCCG 59.067 55.000 0.00 0.00 0.00 4.63
1509 2356 1.471501 CGATTGTGATTCCAGCTCCGA 60.472 52.381 0.00 0.00 0.00 4.55
1510 2357 2.632377 GATTGTGATTCCAGCTCCGAA 58.368 47.619 0.00 0.00 0.00 4.30
1511 2358 2.559698 TTGTGATTCCAGCTCCGAAA 57.440 45.000 0.00 0.00 0.00 3.46
1513 2360 3.904800 TGTGATTCCAGCTCCGAAATA 57.095 42.857 0.00 0.00 0.00 1.40
1515 2362 3.450817 TGTGATTCCAGCTCCGAAATAGA 59.549 43.478 0.00 0.00 0.00 1.98
1516 2363 4.101585 TGTGATTCCAGCTCCGAAATAGAT 59.898 41.667 0.00 0.00 0.00 1.98
1517 2364 5.059833 GTGATTCCAGCTCCGAAATAGATT 58.940 41.667 0.00 0.00 0.00 2.40
1519 2366 6.876257 GTGATTCCAGCTCCGAAATAGATTAT 59.124 38.462 0.00 0.00 0.00 1.28
1520 2367 8.035394 GTGATTCCAGCTCCGAAATAGATTATA 58.965 37.037 0.00 0.00 0.00 0.98
1521 2368 8.253810 TGATTCCAGCTCCGAAATAGATTATAG 58.746 37.037 0.00 0.00 0.00 1.31
1522 2369 5.967088 TCCAGCTCCGAAATAGATTATAGC 58.033 41.667 0.00 0.00 0.00 2.97
1524 2371 6.884096 CAGCTCCGAAATAGATTATAGCTG 57.116 41.667 6.60 6.60 46.61 4.24
1525 2372 5.290643 CAGCTCCGAAATAGATTATAGCTGC 59.709 44.000 7.93 0.00 46.21 5.25
1526 2373 5.047021 AGCTCCGAAATAGATTATAGCTGCA 60.047 40.000 1.02 0.00 37.65 4.41
1527 2374 5.062809 GCTCCGAAATAGATTATAGCTGCAC 59.937 44.000 1.02 0.00 0.00 4.57
1528 2375 6.096673 TCCGAAATAGATTATAGCTGCACA 57.903 37.500 1.02 0.00 0.00 4.57
1529 2376 6.701340 TCCGAAATAGATTATAGCTGCACAT 58.299 36.000 1.02 0.00 0.00 3.21
1531 2378 6.369890 CCGAAATAGATTATAGCTGCACATGT 59.630 38.462 1.02 0.00 0.00 3.21
1533 2380 7.095481 CGAAATAGATTATAGCTGCACATGTGT 60.095 37.037 26.01 9.67 0.00 3.72
1535 2382 4.132336 AGATTATAGCTGCACATGTGTGG 58.868 43.478 26.01 18.92 45.72 4.17
1536 2383 3.348647 TTATAGCTGCACATGTGTGGT 57.651 42.857 26.01 23.70 45.72 4.16
1537 2384 1.456296 ATAGCTGCACATGTGTGGTG 58.544 50.000 26.01 14.51 45.72 4.17
1557 2417 6.774656 GTGGTGGGAAATGAGATCATCTTATT 59.225 38.462 0.00 0.00 34.65 1.40
1587 2447 5.292765 TCGAGGTAGTACTAAGTACATCCG 58.707 45.833 3.61 0.50 41.03 4.18
1610 2470 4.424061 ACATGTGTGGTGATTCATTTCG 57.576 40.909 0.00 0.00 0.00 3.46
1613 2473 5.122239 ACATGTGTGGTGATTCATTTCGTAG 59.878 40.000 0.00 0.00 0.00 3.51
1650 2511 8.383374 TGGAGTAGTTTACCCTGTTAATATGT 57.617 34.615 0.00 0.00 0.00 2.29
1661 2522 6.992715 ACCCTGTTAATATGTATGTTCTCTGC 59.007 38.462 0.00 0.00 0.00 4.26
1667 2528 3.827008 ATGTATGTTCTCTGCGATGGT 57.173 42.857 0.00 0.00 0.00 3.55
1672 2533 2.905075 TGTTCTCTGCGATGGTTATGG 58.095 47.619 0.00 0.00 0.00 2.74
1673 2534 2.499693 TGTTCTCTGCGATGGTTATGGA 59.500 45.455 0.00 0.00 0.00 3.41
1676 2537 2.037641 TCTCTGCGATGGTTATGGATGG 59.962 50.000 0.00 0.00 0.00 3.51
1689 2550 8.225863 TGGTTATGGATGGTATATGGTGTATT 57.774 34.615 0.00 0.00 0.00 1.89
1693 2554 7.574021 ATGGATGGTATATGGTGTATTCTGT 57.426 36.000 0.00 0.00 0.00 3.41
1695 2556 7.450074 TGGATGGTATATGGTGTATTCTGTTC 58.550 38.462 0.00 0.00 0.00 3.18
1696 2557 7.071824 TGGATGGTATATGGTGTATTCTGTTCA 59.928 37.037 0.00 0.00 0.00 3.18
1699 2560 7.497595 TGGTATATGGTGTATTCTGTTCACTC 58.502 38.462 0.00 0.00 33.30 3.51
1704 2565 5.056480 TGGTGTATTCTGTTCACTCTTGTG 58.944 41.667 0.00 0.00 45.07 3.33
1715 2576 2.959030 TCACTCTTGTGCAGACACTAGT 59.041 45.455 7.36 0.00 46.01 2.57
1718 2579 3.889538 ACTCTTGTGCAGACACTAGTACA 59.110 43.478 0.00 0.00 46.01 2.90
1728 2589 8.383619 GTGCAGACACTAGTACAAATTTATCAG 58.616 37.037 0.00 0.00 43.85 2.90
1742 2603 9.793252 ACAAATTTATCAGTTATCACAATCAGC 57.207 29.630 0.00 0.00 0.00 4.26
1746 2607 8.429493 TTTATCAGTTATCACAATCAGCTCTG 57.571 34.615 0.00 0.00 0.00 3.35
1750 2611 5.066117 CAGTTATCACAATCAGCTCTGCATT 59.934 40.000 0.00 0.00 0.00 3.56
1751 2612 6.259387 CAGTTATCACAATCAGCTCTGCATTA 59.741 38.462 0.00 0.00 0.00 1.90
1752 2613 6.825213 AGTTATCACAATCAGCTCTGCATTAA 59.175 34.615 0.00 0.00 0.00 1.40
1768 2629 9.201127 CTCTGCATTAAATCGAGATATCTTTCA 57.799 33.333 6.70 0.00 0.00 2.69
1779 2640 9.964303 ATCGAGATATCTTTCATACATATGCTC 57.036 33.333 6.70 0.00 33.76 4.26
1780 2641 8.960591 TCGAGATATCTTTCATACATATGCTCA 58.039 33.333 6.70 0.00 33.76 4.26
1781 2642 9.578439 CGAGATATCTTTCATACATATGCTCAA 57.422 33.333 6.70 0.00 33.76 3.02
1838 2703 9.533831 ACATCTGTTATAAAAAGGAAATCCACT 57.466 29.630 1.67 0.00 38.89 4.00
1840 2705 9.981460 ATCTGTTATAAAAAGGAAATCCACTCT 57.019 29.630 1.67 0.00 38.89 3.24
1881 2767 3.426568 GCACGGACAAGGAGCTGC 61.427 66.667 0.00 0.00 0.00 5.25
1975 2861 0.820871 TTTGCCAACAGGTGTGTTCC 59.179 50.000 0.00 0.00 43.88 3.62
2040 2928 5.023533 AGAAGGCTCGTCAATGCTTTATA 57.976 39.130 0.00 0.00 0.00 0.98
2041 2929 5.615289 AGAAGGCTCGTCAATGCTTTATAT 58.385 37.500 0.00 0.00 0.00 0.86
2223 3114 5.188434 TCAGAGGCAAATCATGAAAGGTAG 58.812 41.667 0.00 0.00 0.00 3.18
2255 3148 5.991606 TGTATGACTTACTATTCATGCTGCC 59.008 40.000 0.00 0.00 36.23 4.85
2273 3166 1.925946 GCCGTGACAATGAAGTGTTGC 60.926 52.381 0.00 0.00 0.00 4.17
2342 3235 0.392998 CTCCATTTCCACCACCCTCG 60.393 60.000 0.00 0.00 0.00 4.63
2371 3264 3.411446 ACATCAATGTGGTCGTGACATT 58.589 40.909 2.00 0.00 43.34 2.71
2377 3270 1.140052 TGTGGTCGTGACATTTGGAGT 59.860 47.619 2.00 0.00 0.00 3.85
2472 3365 1.239968 CCTCCTTTGCCTCACAGTGC 61.240 60.000 0.00 0.00 0.00 4.40
2513 3406 3.118112 TCTCCTCTCCATTTCATTGGCTC 60.118 47.826 0.00 0.00 36.66 4.70
2574 3467 1.271871 TGGCCCTTGCATATATTCCGG 60.272 52.381 0.00 0.00 40.13 5.14
2694 3587 2.656422 GTGACGAAAAACGCATTCCATG 59.344 45.455 0.00 0.00 46.94 3.66
2774 3667 9.719355 TTACAAATACTAGCAATTCACAAGAGA 57.281 29.630 0.00 0.00 0.00 3.10
2775 3668 8.621532 ACAAATACTAGCAATTCACAAGAGAA 57.378 30.769 0.00 0.00 0.00 2.87
2898 3791 0.503961 GAGCACAAAACACATTGCGC 59.496 50.000 0.00 0.00 40.04 6.09
2915 3808 1.850377 CGCTAGCAGTCAATGAGGAG 58.150 55.000 16.45 0.00 0.00 3.69
2958 3851 8.220755 ACTGATTGTTAGTTTCTTACTGCAAA 57.779 30.769 0.00 0.00 36.96 3.68
2986 3879 6.145371 CACTTGTTTCTTTGCTCTCTAGACTC 59.855 42.308 0.00 0.00 0.00 3.36
2998 3891 3.504134 TCTCTAGACTCTGTGTTCACTGC 59.496 47.826 4.59 0.00 0.00 4.40
3002 3895 0.394565 ACTCTGTGTTCACTGCCCTC 59.605 55.000 4.59 0.00 0.00 4.30
3059 3952 0.098376 ATGGTACGAACTCGCGTCTC 59.902 55.000 5.77 0.00 44.39 3.36
3066 3959 0.319641 GAACTCGCGTCTCCAGGTTT 60.320 55.000 5.77 0.00 0.00 3.27
3074 3967 3.187637 CGCGTCTCCAGGTTTTATTTCAA 59.812 43.478 0.00 0.00 0.00 2.69
3088 3981 5.855740 TTATTTCAAACCCTTGTTTCCGT 57.144 34.783 0.00 0.00 42.73 4.69
3089 3982 4.746535 ATTTCAAACCCTTGTTTCCGTT 57.253 36.364 0.00 0.00 42.73 4.44
3090 3983 3.786516 TTCAAACCCTTGTTTCCGTTC 57.213 42.857 0.00 0.00 42.73 3.95
3091 3984 2.025898 TCAAACCCTTGTTTCCGTTCC 58.974 47.619 0.00 0.00 42.73 3.62
3092 3985 2.028876 CAAACCCTTGTTTCCGTTCCT 58.971 47.619 0.00 0.00 42.73 3.36
3093 3986 2.429250 CAAACCCTTGTTTCCGTTCCTT 59.571 45.455 0.00 0.00 42.73 3.36
3094 3987 3.581265 AACCCTTGTTTCCGTTCCTTA 57.419 42.857 0.00 0.00 0.00 2.69
3095 3988 3.801307 ACCCTTGTTTCCGTTCCTTAT 57.199 42.857 0.00 0.00 0.00 1.73
3096 3989 3.682696 ACCCTTGTTTCCGTTCCTTATC 58.317 45.455 0.00 0.00 0.00 1.75
3097 3990 3.014623 CCCTTGTTTCCGTTCCTTATCC 58.985 50.000 0.00 0.00 0.00 2.59
3098 3991 3.308188 CCCTTGTTTCCGTTCCTTATCCT 60.308 47.826 0.00 0.00 0.00 3.24
3099 3992 4.332828 CCTTGTTTCCGTTCCTTATCCTT 58.667 43.478 0.00 0.00 0.00 3.36
3100 3993 5.493809 CCTTGTTTCCGTTCCTTATCCTTA 58.506 41.667 0.00 0.00 0.00 2.69
3106 3999 4.617593 TCCGTTCCTTATCCTTAGACCTT 58.382 43.478 0.00 0.00 0.00 3.50
3107 4000 5.769835 TCCGTTCCTTATCCTTAGACCTTA 58.230 41.667 0.00 0.00 0.00 2.69
3111 4004 7.147776 CCGTTCCTTATCCTTAGACCTTAAAGA 60.148 40.741 0.00 0.00 0.00 2.52
3134 4027 7.652727 AGAAAGTTTCTTTGCTCTTTGATACC 58.347 34.615 12.50 0.00 36.36 2.73
3139 4032 8.734386 AGTTTCTTTGCTCTTTGATACCAATAG 58.266 33.333 0.00 0.00 31.46 1.73
3140 4033 8.515414 GTTTCTTTGCTCTTTGATACCAATAGT 58.485 33.333 0.00 0.00 31.46 2.12
3142 4035 8.268850 TCTTTGCTCTTTGATACCAATAGTTC 57.731 34.615 0.00 0.00 31.46 3.01
3146 4039 7.394016 TGCTCTTTGATACCAATAGTTCTCAA 58.606 34.615 0.00 0.00 31.01 3.02
3171 4065 4.945292 TTGCACGAATTGAATTTTGACG 57.055 36.364 0.00 1.02 0.00 4.35
3176 4070 5.612276 GCACGAATTGAATTTTGACGCAAAT 60.612 36.000 5.97 0.00 33.19 2.32
3177 4071 6.399459 GCACGAATTGAATTTTGACGCAAATA 60.399 34.615 5.97 0.07 33.19 1.40
3299 4193 7.067008 GGTATAGTGATGCTTGTGGTTATTGTT 59.933 37.037 0.00 0.00 0.00 2.83
3359 4253 3.360249 AATCAGTTTCAAGTGTGCAGC 57.640 42.857 0.00 0.00 0.00 5.25
3538 4436 9.448438 TTTGATGTGCTGTATTAGTCAATAACT 57.552 29.630 0.00 0.00 42.33 2.24
3552 4450 4.631813 GTCAATAACTTACACCCTCTGCTG 59.368 45.833 0.00 0.00 0.00 4.41
3566 4464 3.196463 CTCTGCTGAGGAATGACATGTC 58.804 50.000 19.27 19.27 36.70 3.06
3567 4465 2.568509 TCTGCTGAGGAATGACATGTCA 59.431 45.455 29.67 29.67 44.59 3.58
3568 4466 2.676839 CTGCTGAGGAATGACATGTCAC 59.323 50.000 30.09 18.17 43.11 3.67
3569 4467 1.662629 GCTGAGGAATGACATGTCACG 59.337 52.381 30.09 13.72 43.11 4.35
3570 4468 1.662629 CTGAGGAATGACATGTCACGC 59.337 52.381 30.09 22.73 43.11 5.34
3597 4495 4.327357 GGATGAGACGCGGTCAATATAATG 59.673 45.833 16.16 0.00 34.60 1.90
3771 4671 5.105797 ACAGCAGTTCAACATTTCAGTGAAA 60.106 36.000 20.14 20.14 35.94 2.69
3844 4744 3.403038 AGTCCACAGTGAAATGCTACAC 58.597 45.455 0.62 0.00 37.30 2.90
3851 4751 3.366121 CAGTGAAATGCTACACTCAGTCG 59.634 47.826 0.00 0.00 44.07 4.18
3859 4759 3.127030 TGCTACACTCAGTCGTATCACAG 59.873 47.826 0.00 0.00 0.00 3.66
3865 4765 5.241064 ACACTCAGTCGTATCACAGTAAGTT 59.759 40.000 0.00 0.00 0.00 2.66
3876 4776 4.357142 TCACAGTAAGTTGACGACTGAAC 58.643 43.478 19.39 0.00 42.65 3.18
3881 4781 4.972440 AGTAAGTTGACGACTGAACGTTAC 59.028 41.667 0.00 0.00 46.52 2.50
3889 4791 5.118050 TGACGACTGAACGTTACATTCAATC 59.882 40.000 0.00 0.00 46.52 2.67
3927 4829 0.381801 CCTTCAAAAGGCGCGCATAT 59.618 50.000 34.42 16.25 42.78 1.78
3928 4830 1.202290 CCTTCAAAAGGCGCGCATATT 60.202 47.619 34.42 20.92 42.78 1.28
3957 4859 6.546034 TCTGATTCTACCTATTCATCACGACA 59.454 38.462 0.00 0.00 0.00 4.35
4078 4980 7.605449 CAAAACACCATTCTGATTCTACCATT 58.395 34.615 0.00 0.00 0.00 3.16
4088 4990 6.586344 TCTGATTCTACCATTCTTGTCATCC 58.414 40.000 0.00 0.00 0.00 3.51
4117 5019 2.203625 GCCTCCAAAGTTGCCCCA 60.204 61.111 0.00 0.00 0.00 4.96
4123 5025 2.634453 CTCCAAAGTTGCCCCAGAAAAT 59.366 45.455 0.00 0.00 0.00 1.82
4150 5052 7.230849 ACTTTTGTTGGAATGATTCATGCTA 57.769 32.000 7.56 0.00 0.00 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.383761 CATCCCCGAGCAAAAATATTGC 58.616 45.455 5.06 5.06 45.22 3.56
35 36 3.243839 CCCATCCCCGAGCAAAAATATTG 60.244 47.826 0.00 0.00 0.00 1.90
36 37 2.965147 CCCATCCCCGAGCAAAAATATT 59.035 45.455 0.00 0.00 0.00 1.28
37 38 2.597455 CCCATCCCCGAGCAAAAATAT 58.403 47.619 0.00 0.00 0.00 1.28
38 39 1.410932 CCCCATCCCCGAGCAAAAATA 60.411 52.381 0.00 0.00 0.00 1.40
39 40 0.687427 CCCCATCCCCGAGCAAAAAT 60.687 55.000 0.00 0.00 0.00 1.82
40 41 1.304879 CCCCATCCCCGAGCAAAAA 60.305 57.895 0.00 0.00 0.00 1.94
41 42 2.358619 CCCCATCCCCGAGCAAAA 59.641 61.111 0.00 0.00 0.00 2.44
42 43 2.938798 ACCCCATCCCCGAGCAAA 60.939 61.111 0.00 0.00 0.00 3.68
43 44 3.727258 CACCCCATCCCCGAGCAA 61.727 66.667 0.00 0.00 0.00 3.91
46 47 3.480133 GACCACCCCATCCCCGAG 61.480 72.222 0.00 0.00 0.00 4.63
49 50 2.944390 TTGGACCACCCCATCCCC 60.944 66.667 0.00 0.00 35.87 4.81
50 51 2.683475 CTTGGACCACCCCATCCC 59.317 66.667 0.00 0.00 35.87 3.85
51 52 1.800229 AACCTTGGACCACCCCATCC 61.800 60.000 0.00 0.00 35.87 3.51
52 53 0.323451 GAACCTTGGACCACCCCATC 60.323 60.000 0.00 0.00 35.87 3.51
53 54 1.071314 TGAACCTTGGACCACCCCAT 61.071 55.000 0.00 0.00 35.87 4.00
54 55 1.289982 TTGAACCTTGGACCACCCCA 61.290 55.000 0.00 0.00 34.81 4.96
55 56 0.105913 TTTGAACCTTGGACCACCCC 60.106 55.000 0.00 0.00 34.81 4.95
56 57 1.133606 TCTTTGAACCTTGGACCACCC 60.134 52.381 0.00 0.00 34.81 4.61
57 58 2.358322 TCTTTGAACCTTGGACCACC 57.642 50.000 0.00 0.00 0.00 4.61
58 59 6.208599 TGAATATTCTTTGAACCTTGGACCAC 59.791 38.462 16.24 0.00 0.00 4.16
59 60 6.310941 TGAATATTCTTTGAACCTTGGACCA 58.689 36.000 16.24 0.00 0.00 4.02
60 61 6.127619 CCTGAATATTCTTTGAACCTTGGACC 60.128 42.308 16.24 0.00 0.00 4.46
61 62 6.659242 TCCTGAATATTCTTTGAACCTTGGAC 59.341 38.462 16.24 0.00 0.00 4.02
62 63 6.789268 TCCTGAATATTCTTTGAACCTTGGA 58.211 36.000 16.24 5.88 0.00 3.53
63 64 7.466746 TTCCTGAATATTCTTTGAACCTTGG 57.533 36.000 16.24 4.03 0.00 3.61
80 81 9.532494 TCCAAAAATCTTGAGATAATTCCTGAA 57.468 29.630 0.00 0.00 33.73 3.02
81 82 9.182214 CTCCAAAAATCTTGAGATAATTCCTGA 57.818 33.333 0.00 0.00 33.73 3.86
82 83 7.919621 GCTCCAAAAATCTTGAGATAATTCCTG 59.080 37.037 0.00 0.00 33.73 3.86
83 84 7.616935 TGCTCCAAAAATCTTGAGATAATTCCT 59.383 33.333 0.00 0.00 33.73 3.36
84 85 7.775120 TGCTCCAAAAATCTTGAGATAATTCC 58.225 34.615 0.00 0.00 33.73 3.01
85 86 9.813446 ATTGCTCCAAAAATCTTGAGATAATTC 57.187 29.630 0.00 0.00 33.73 2.17
93 94 9.775854 TCATTTTTATTGCTCCAAAAATCTTGA 57.224 25.926 10.50 6.58 40.56 3.02
95 96 9.223099 CCTCATTTTTATTGCTCCAAAAATCTT 57.777 29.630 10.50 0.00 40.56 2.40
96 97 7.825761 CCCTCATTTTTATTGCTCCAAAAATCT 59.174 33.333 10.50 0.00 40.56 2.40
97 98 7.607607 ACCCTCATTTTTATTGCTCCAAAAATC 59.392 33.333 10.50 0.00 40.56 2.17
98 99 7.460910 ACCCTCATTTTTATTGCTCCAAAAAT 58.539 30.769 8.62 8.62 42.28 1.82
99 100 6.836242 ACCCTCATTTTTATTGCTCCAAAAA 58.164 32.000 5.53 5.53 37.84 1.94
100 101 6.432403 ACCCTCATTTTTATTGCTCCAAAA 57.568 33.333 0.00 0.00 0.00 2.44
101 102 6.229733 CAACCCTCATTTTTATTGCTCCAAA 58.770 36.000 0.00 0.00 0.00 3.28
102 103 5.792741 CAACCCTCATTTTTATTGCTCCAA 58.207 37.500 0.00 0.00 0.00 3.53
103 104 4.322650 GCAACCCTCATTTTTATTGCTCCA 60.323 41.667 0.00 0.00 39.42 3.86
104 105 4.183865 GCAACCCTCATTTTTATTGCTCC 58.816 43.478 0.00 0.00 39.42 4.70
107 108 5.106594 CCAAAGCAACCCTCATTTTTATTGC 60.107 40.000 0.00 0.00 42.11 3.56
108 109 6.229733 TCCAAAGCAACCCTCATTTTTATTG 58.770 36.000 0.00 0.00 0.00 1.90
109 110 6.432403 TCCAAAGCAACCCTCATTTTTATT 57.568 33.333 0.00 0.00 0.00 1.40
110 111 6.041423 CTCCAAAGCAACCCTCATTTTTAT 57.959 37.500 0.00 0.00 0.00 1.40
111 112 5.467035 CTCCAAAGCAACCCTCATTTTTA 57.533 39.130 0.00 0.00 0.00 1.52
112 113 4.341366 CTCCAAAGCAACCCTCATTTTT 57.659 40.909 0.00 0.00 0.00 1.94
126 127 4.887748 TCTCAGAAACTAGTGCTCCAAAG 58.112 43.478 0.00 0.00 0.00 2.77
127 128 4.955811 TCTCAGAAACTAGTGCTCCAAA 57.044 40.909 0.00 0.00 0.00 3.28
128 129 4.528206 TCATCTCAGAAACTAGTGCTCCAA 59.472 41.667 0.00 0.00 0.00 3.53
129 130 4.089361 TCATCTCAGAAACTAGTGCTCCA 58.911 43.478 0.00 0.00 0.00 3.86
130 131 4.159506 ACTCATCTCAGAAACTAGTGCTCC 59.840 45.833 0.00 0.00 0.00 4.70
131 132 5.323371 ACTCATCTCAGAAACTAGTGCTC 57.677 43.478 0.00 0.00 0.00 4.26
132 133 5.736951 AACTCATCTCAGAAACTAGTGCT 57.263 39.130 0.00 0.00 0.00 4.40
133 134 5.928839 TGAAACTCATCTCAGAAACTAGTGC 59.071 40.000 0.00 0.00 0.00 4.40
134 135 7.374272 TCTGAAACTCATCTCAGAAACTAGTG 58.626 38.462 0.00 0.00 43.90 2.74
135 136 7.531857 TCTGAAACTCATCTCAGAAACTAGT 57.468 36.000 0.00 0.00 43.90 2.57
142 143 7.387122 CACATTTCTTCTGAAACTCATCTCAGA 59.613 37.037 0.00 0.00 44.90 3.27
143 144 7.387122 TCACATTTCTTCTGAAACTCATCTCAG 59.613 37.037 0.00 0.00 43.90 3.35
144 145 7.219322 TCACATTTCTTCTGAAACTCATCTCA 58.781 34.615 0.00 0.00 43.90 3.27
145 146 7.664082 TCACATTTCTTCTGAAACTCATCTC 57.336 36.000 0.00 0.00 43.90 2.75
146 147 8.512956 CAATCACATTTCTTCTGAAACTCATCT 58.487 33.333 0.00 0.00 43.90 2.90
147 148 8.509690 TCAATCACATTTCTTCTGAAACTCATC 58.490 33.333 0.00 0.00 43.90 2.92
148 149 8.400184 TCAATCACATTTCTTCTGAAACTCAT 57.600 30.769 0.00 0.00 43.90 2.90
149 150 7.806409 TCAATCACATTTCTTCTGAAACTCA 57.194 32.000 0.00 0.00 43.90 3.41
150 151 9.125906 CATTCAATCACATTTCTTCTGAAACTC 57.874 33.333 0.00 0.00 43.90 3.01
151 152 8.853126 TCATTCAATCACATTTCTTCTGAAACT 58.147 29.630 0.00 0.00 43.90 2.66
152 153 9.125906 CTCATTCAATCACATTTCTTCTGAAAC 57.874 33.333 0.00 0.00 43.90 2.78
153 154 9.070179 TCTCATTCAATCACATTTCTTCTGAAA 57.930 29.630 0.00 0.00 44.99 2.69
154 155 8.625786 TCTCATTCAATCACATTTCTTCTGAA 57.374 30.769 0.00 0.00 0.00 3.02
155 156 7.336176 CCTCTCATTCAATCACATTTCTTCTGA 59.664 37.037 0.00 0.00 0.00 3.27
156 157 7.120873 ACCTCTCATTCAATCACATTTCTTCTG 59.879 37.037 0.00 0.00 0.00 3.02
157 158 7.173722 ACCTCTCATTCAATCACATTTCTTCT 58.826 34.615 0.00 0.00 0.00 2.85
158 159 7.388460 ACCTCTCATTCAATCACATTTCTTC 57.612 36.000 0.00 0.00 0.00 2.87
159 160 8.324306 TCTACCTCTCATTCAATCACATTTCTT 58.676 33.333 0.00 0.00 0.00 2.52
160 161 7.855375 TCTACCTCTCATTCAATCACATTTCT 58.145 34.615 0.00 0.00 0.00 2.52
161 162 8.557864 CATCTACCTCTCATTCAATCACATTTC 58.442 37.037 0.00 0.00 0.00 2.17
162 163 7.501559 CCATCTACCTCTCATTCAATCACATTT 59.498 37.037 0.00 0.00 0.00 2.32
163 164 6.996879 CCATCTACCTCTCATTCAATCACATT 59.003 38.462 0.00 0.00 0.00 2.71
164 165 6.465464 CCCATCTACCTCTCATTCAATCACAT 60.465 42.308 0.00 0.00 0.00 3.21
165 166 5.163269 CCCATCTACCTCTCATTCAATCACA 60.163 44.000 0.00 0.00 0.00 3.58
166 167 5.163258 ACCCATCTACCTCTCATTCAATCAC 60.163 44.000 0.00 0.00 0.00 3.06
167 168 4.971282 ACCCATCTACCTCTCATTCAATCA 59.029 41.667 0.00 0.00 0.00 2.57
168 169 5.070981 TGACCCATCTACCTCTCATTCAATC 59.929 44.000 0.00 0.00 0.00 2.67
169 170 4.971282 TGACCCATCTACCTCTCATTCAAT 59.029 41.667 0.00 0.00 0.00 2.57
170 171 4.162320 GTGACCCATCTACCTCTCATTCAA 59.838 45.833 0.00 0.00 0.00 2.69
171 172 3.706594 GTGACCCATCTACCTCTCATTCA 59.293 47.826 0.00 0.00 0.00 2.57
172 173 3.964031 AGTGACCCATCTACCTCTCATTC 59.036 47.826 0.00 0.00 0.00 2.67
173 174 4.000928 AGTGACCCATCTACCTCTCATT 57.999 45.455 0.00 0.00 0.00 2.57
174 175 3.697190 AGTGACCCATCTACCTCTCAT 57.303 47.619 0.00 0.00 0.00 2.90
175 176 3.099905 CAAGTGACCCATCTACCTCTCA 58.900 50.000 0.00 0.00 0.00 3.27
176 177 2.432510 CCAAGTGACCCATCTACCTCTC 59.567 54.545 0.00 0.00 0.00 3.20
177 178 2.472029 CCAAGTGACCCATCTACCTCT 58.528 52.381 0.00 0.00 0.00 3.69
178 179 1.486726 CCCAAGTGACCCATCTACCTC 59.513 57.143 0.00 0.00 0.00 3.85
179 180 1.203440 ACCCAAGTGACCCATCTACCT 60.203 52.381 0.00 0.00 0.00 3.08
180 181 1.286248 ACCCAAGTGACCCATCTACC 58.714 55.000 0.00 0.00 0.00 3.18
191 192 1.956477 CCCTTGACTTTCACCCAAGTG 59.044 52.381 0.00 0.00 46.00 3.16
192 193 1.754201 GCCCTTGACTTTCACCCAAGT 60.754 52.381 0.00 0.00 39.84 3.16
193 194 0.961753 GCCCTTGACTTTCACCCAAG 59.038 55.000 0.00 0.00 37.58 3.61
194 195 0.260230 TGCCCTTGACTTTCACCCAA 59.740 50.000 0.00 0.00 0.00 4.12
195 196 0.482446 ATGCCCTTGACTTTCACCCA 59.518 50.000 0.00 0.00 0.00 4.51
196 197 0.890683 CATGCCCTTGACTTTCACCC 59.109 55.000 0.00 0.00 0.00 4.61
197 198 0.244721 GCATGCCCTTGACTTTCACC 59.755 55.000 6.36 0.00 0.00 4.02
198 199 1.200948 GAGCATGCCCTTGACTTTCAC 59.799 52.381 15.66 0.00 0.00 3.18
199 200 1.202915 TGAGCATGCCCTTGACTTTCA 60.203 47.619 15.66 5.15 0.00 2.69
200 201 1.538047 TGAGCATGCCCTTGACTTTC 58.462 50.000 15.66 2.17 0.00 2.62
201 202 1.891150 CTTGAGCATGCCCTTGACTTT 59.109 47.619 15.66 0.00 0.00 2.66
202 203 1.202976 ACTTGAGCATGCCCTTGACTT 60.203 47.619 15.66 0.00 0.00 3.01
203 204 0.403271 ACTTGAGCATGCCCTTGACT 59.597 50.000 15.66 0.00 0.00 3.41
204 205 0.524862 CACTTGAGCATGCCCTTGAC 59.475 55.000 15.66 0.00 0.00 3.18
205 206 0.401356 TCACTTGAGCATGCCCTTGA 59.599 50.000 15.66 7.50 0.00 3.02
206 207 1.471119 ATCACTTGAGCATGCCCTTG 58.529 50.000 15.66 5.43 0.00 3.61
207 208 3.285484 CTTATCACTTGAGCATGCCCTT 58.715 45.455 15.66 0.00 0.00 3.95
208 209 2.240667 ACTTATCACTTGAGCATGCCCT 59.759 45.455 15.66 0.00 0.00 5.19
209 210 2.615912 GACTTATCACTTGAGCATGCCC 59.384 50.000 15.66 2.04 0.00 5.36
210 211 2.615912 GGACTTATCACTTGAGCATGCC 59.384 50.000 15.66 6.65 0.00 4.40
211 212 3.273434 TGGACTTATCACTTGAGCATGC 58.727 45.455 10.51 10.51 0.00 4.06
212 213 6.094464 TCAAATGGACTTATCACTTGAGCATG 59.906 38.462 0.00 0.00 0.00 4.06
213 214 6.182627 TCAAATGGACTTATCACTTGAGCAT 58.817 36.000 0.00 0.00 0.00 3.79
214 215 5.559770 TCAAATGGACTTATCACTTGAGCA 58.440 37.500 0.00 0.00 0.00 4.26
215 216 6.500684 TTCAAATGGACTTATCACTTGAGC 57.499 37.500 0.00 0.00 0.00 4.26
216 217 8.733458 TCAATTCAAATGGACTTATCACTTGAG 58.267 33.333 0.00 0.00 0.00 3.02
217 218 8.634335 TCAATTCAAATGGACTTATCACTTGA 57.366 30.769 0.00 0.00 0.00 3.02
218 219 9.865321 AATCAATTCAAATGGACTTATCACTTG 57.135 29.630 0.00 0.00 0.00 3.16
220 221 9.471702 AGAATCAATTCAAATGGACTTATCACT 57.528 29.630 5.59 0.00 39.23 3.41
248 249 5.221641 GCCCTTACCTTGGATTTGAGTTTTT 60.222 40.000 0.00 0.00 0.00 1.94
249 250 4.283467 GCCCTTACCTTGGATTTGAGTTTT 59.717 41.667 0.00 0.00 0.00 2.43
250 251 3.832490 GCCCTTACCTTGGATTTGAGTTT 59.168 43.478 0.00 0.00 0.00 2.66
251 252 3.181423 TGCCCTTACCTTGGATTTGAGTT 60.181 43.478 0.00 0.00 0.00 3.01
252 253 2.378547 TGCCCTTACCTTGGATTTGAGT 59.621 45.455 0.00 0.00 0.00 3.41
253 254 3.085952 TGCCCTTACCTTGGATTTGAG 57.914 47.619 0.00 0.00 0.00 3.02
254 255 3.534357 TTGCCCTTACCTTGGATTTGA 57.466 42.857 0.00 0.00 0.00 2.69
255 256 4.222588 TGATTTGCCCTTACCTTGGATTTG 59.777 41.667 0.00 0.00 0.00 2.32
256 257 4.424842 TGATTTGCCCTTACCTTGGATTT 58.575 39.130 0.00 0.00 0.00 2.17
257 258 4.059773 TGATTTGCCCTTACCTTGGATT 57.940 40.909 0.00 0.00 0.00 3.01
258 259 3.756082 TGATTTGCCCTTACCTTGGAT 57.244 42.857 0.00 0.00 0.00 3.41
259 260 3.181423 ACTTGATTTGCCCTTACCTTGGA 60.181 43.478 0.00 0.00 0.00 3.53
260 261 3.165071 ACTTGATTTGCCCTTACCTTGG 58.835 45.455 0.00 0.00 0.00 3.61
261 262 3.193479 GGACTTGATTTGCCCTTACCTTG 59.807 47.826 0.00 0.00 0.00 3.61
262 263 3.431415 GGACTTGATTTGCCCTTACCTT 58.569 45.455 0.00 0.00 0.00 3.50
263 264 2.618045 CGGACTTGATTTGCCCTTACCT 60.618 50.000 0.00 0.00 0.00 3.08
264 265 1.743394 CGGACTTGATTTGCCCTTACC 59.257 52.381 0.00 0.00 0.00 2.85
265 266 1.743394 CCGGACTTGATTTGCCCTTAC 59.257 52.381 0.00 0.00 0.00 2.34
266 267 1.631388 TCCGGACTTGATTTGCCCTTA 59.369 47.619 0.00 0.00 0.00 2.69
267 268 0.404040 TCCGGACTTGATTTGCCCTT 59.596 50.000 0.00 0.00 0.00 3.95
268 269 0.404040 TTCCGGACTTGATTTGCCCT 59.596 50.000 1.83 0.00 0.00 5.19
269 270 1.253100 TTTCCGGACTTGATTTGCCC 58.747 50.000 1.83 0.00 0.00 5.36
270 271 3.378911 TTTTTCCGGACTTGATTTGCC 57.621 42.857 1.83 0.00 0.00 4.52
289 290 2.439135 ACAGCCTGGATTTTGCCTTTTT 59.561 40.909 0.00 0.00 0.00 1.94
290 291 2.037641 GACAGCCTGGATTTTGCCTTTT 59.962 45.455 0.00 0.00 0.00 2.27
291 292 1.620323 GACAGCCTGGATTTTGCCTTT 59.380 47.619 0.00 0.00 0.00 3.11
292 293 1.260544 GACAGCCTGGATTTTGCCTT 58.739 50.000 0.00 0.00 0.00 4.35
293 294 0.112995 TGACAGCCTGGATTTTGCCT 59.887 50.000 0.00 0.00 0.00 4.75
294 295 0.244721 GTGACAGCCTGGATTTTGCC 59.755 55.000 0.00 0.00 0.00 4.52
295 296 0.961019 TGTGACAGCCTGGATTTTGC 59.039 50.000 0.00 0.00 0.00 3.68
296 297 2.559668 ACATGTGACAGCCTGGATTTTG 59.440 45.455 0.00 0.00 0.00 2.44
297 298 2.880443 ACATGTGACAGCCTGGATTTT 58.120 42.857 0.00 0.00 0.00 1.82
298 299 2.592102 ACATGTGACAGCCTGGATTT 57.408 45.000 0.00 0.00 0.00 2.17
299 300 2.592102 AACATGTGACAGCCTGGATT 57.408 45.000 0.00 0.00 0.00 3.01
300 301 2.592102 AAACATGTGACAGCCTGGAT 57.408 45.000 0.00 0.00 0.00 3.41
301 302 2.371841 AGTAAACATGTGACAGCCTGGA 59.628 45.455 0.00 0.00 0.00 3.86
302 303 2.744202 GAGTAAACATGTGACAGCCTGG 59.256 50.000 0.00 0.00 0.00 4.45
303 304 2.744202 GGAGTAAACATGTGACAGCCTG 59.256 50.000 0.00 0.00 0.00 4.85
304 305 2.612972 CGGAGTAAACATGTGACAGCCT 60.613 50.000 0.00 0.00 0.00 4.58
305 306 1.732259 CGGAGTAAACATGTGACAGCC 59.268 52.381 0.00 6.12 0.00 4.85
306 307 1.128692 GCGGAGTAAACATGTGACAGC 59.871 52.381 0.00 5.02 0.00 4.40
307 308 1.732259 GGCGGAGTAAACATGTGACAG 59.268 52.381 0.00 0.00 0.00 3.51
308 309 1.803334 GGCGGAGTAAACATGTGACA 58.197 50.000 0.00 0.00 0.00 3.58
309 310 0.719465 CGGCGGAGTAAACATGTGAC 59.281 55.000 0.00 0.40 0.00 3.67
310 311 0.604073 TCGGCGGAGTAAACATGTGA 59.396 50.000 7.21 0.00 0.00 3.58
311 312 1.434555 TTCGGCGGAGTAAACATGTG 58.565 50.000 7.21 0.00 0.00 3.21
312 313 2.277084 GATTCGGCGGAGTAAACATGT 58.723 47.619 7.21 0.00 0.00 3.21
313 314 1.597663 GGATTCGGCGGAGTAAACATG 59.402 52.381 7.21 0.00 0.00 3.21
314 315 1.485066 AGGATTCGGCGGAGTAAACAT 59.515 47.619 7.21 0.00 0.00 2.71
315 316 0.899720 AGGATTCGGCGGAGTAAACA 59.100 50.000 7.21 0.00 0.00 2.83
344 345 2.093658 GGCAACTCTGACCGATTCCTAA 60.094 50.000 0.00 0.00 0.00 2.69
388 390 0.825425 TGCCGGGCAAAAGTTGATCA 60.825 50.000 21.55 0.00 34.76 2.92
389 391 0.316841 TTGCCGGGCAAAAGTTGATC 59.683 50.000 31.03 0.00 45.96 2.92
401 403 0.107945 CCTCTCTCTTTCTTGCCGGG 60.108 60.000 2.18 0.00 0.00 5.73
404 406 2.503356 TGATCCCTCTCTCTTTCTTGCC 59.497 50.000 0.00 0.00 0.00 4.52
425 427 2.094675 GGAGTGTGTAGCAAATGCCAT 58.905 47.619 0.94 0.00 43.38 4.40
449 451 7.418408 TCGAAAACACATTGTATTTAGCAACA 58.582 30.769 0.00 0.00 0.00 3.33
516 518 9.872757 ACGTGTAAAGACATATTTTAAAGTGTG 57.127 29.630 6.00 6.00 38.04 3.82
532 534 3.057386 TCGGCATGAACTACGTGTAAAGA 60.057 43.478 0.00 0.00 37.77 2.52
546 556 3.826157 ACCTTTCAAAGATTTCGGCATGA 59.174 39.130 0.00 0.00 0.00 3.07
550 560 3.643159 ACACCTTTCAAAGATTTCGGC 57.357 42.857 0.00 0.00 0.00 5.54
551 561 6.677913 ACATAACACCTTTCAAAGATTTCGG 58.322 36.000 0.00 0.00 0.00 4.30
569 579 5.936372 ACTCCCTCCGTTTCTAAAACATAAC 59.064 40.000 3.72 0.00 0.00 1.89
698 708 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
699 709 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
700 710 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
701 711 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
702 712 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
704 714 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
705 715 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
706 716 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
707 717 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
708 718 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
712 722 9.289782 GATTAGTACTCCCTCCGTAAACTAATA 57.710 37.037 0.00 0.00 30.85 0.98
713 723 7.781693 TGATTAGTACTCCCTCCGTAAACTAAT 59.218 37.037 0.00 4.90 32.62 1.73
715 725 6.662755 TGATTAGTACTCCCTCCGTAAACTA 58.337 40.000 0.00 0.00 0.00 2.24
716 726 5.513233 TGATTAGTACTCCCTCCGTAAACT 58.487 41.667 0.00 0.00 0.00 2.66
717 727 5.841957 TGATTAGTACTCCCTCCGTAAAC 57.158 43.478 0.00 0.00 0.00 2.01
718 728 5.895534 ACATGATTAGTACTCCCTCCGTAAA 59.104 40.000 0.00 0.00 0.00 2.01
719 729 5.452255 ACATGATTAGTACTCCCTCCGTAA 58.548 41.667 0.00 0.00 0.00 3.18
720 730 5.057843 ACATGATTAGTACTCCCTCCGTA 57.942 43.478 0.00 0.00 0.00 4.02
724 734 7.607250 CAGGATAACATGATTAGTACTCCCTC 58.393 42.308 0.00 0.00 0.00 4.30
725 735 6.014156 GCAGGATAACATGATTAGTACTCCCT 60.014 42.308 0.00 0.00 0.00 4.20
726 736 6.166982 GCAGGATAACATGATTAGTACTCCC 58.833 44.000 0.00 0.00 0.00 4.30
871 1629 1.373497 CTTGCTCGAGTTGCTCCGT 60.373 57.895 15.13 0.00 0.00 4.69
1168 1948 2.822643 ATCCCCTCGAGGCTGTCCAA 62.823 60.000 26.87 5.58 33.74 3.53
1286 2073 4.104738 TCCATCCAATTATCCCTCTTCCAC 59.895 45.833 0.00 0.00 0.00 4.02
1299 2090 2.689983 GCAAATCGACCTCCATCCAATT 59.310 45.455 0.00 0.00 0.00 2.32
1304 2095 1.062587 CAACGCAAATCGACCTCCATC 59.937 52.381 0.00 0.00 41.67 3.51
1307 2102 0.442699 GACAACGCAAATCGACCTCC 59.557 55.000 0.00 0.00 41.67 4.30
1309 2104 0.034896 AGGACAACGCAAATCGACCT 59.965 50.000 0.00 0.00 41.67 3.85
1310 2105 0.872388 AAGGACAACGCAAATCGACC 59.128 50.000 0.00 0.00 41.67 4.79
1312 2107 1.944024 ACAAAGGACAACGCAAATCGA 59.056 42.857 0.00 0.00 41.67 3.59
1313 2108 2.399396 ACAAAGGACAACGCAAATCG 57.601 45.000 0.00 0.00 45.38 3.34
1315 2110 2.693074 AGGAACAAAGGACAACGCAAAT 59.307 40.909 0.00 0.00 0.00 2.32
1316 2111 2.096248 AGGAACAAAGGACAACGCAAA 58.904 42.857 0.00 0.00 0.00 3.68
1322 2117 6.295688 GGTGACTATCTAGGAACAAAGGACAA 60.296 42.308 0.00 0.00 0.00 3.18
1327 2122 5.659079 AGGAGGTGACTATCTAGGAACAAAG 59.341 44.000 0.00 0.00 44.43 2.77
1332 2127 3.052869 TGCAGGAGGTGACTATCTAGGAA 60.053 47.826 0.00 0.00 44.43 3.36
1333 2128 2.514160 TGCAGGAGGTGACTATCTAGGA 59.486 50.000 0.00 0.00 44.43 2.94
1336 2131 3.953542 TCTGCAGGAGGTGACTATCTA 57.046 47.619 15.13 0.00 44.43 1.98
1339 2134 3.378512 TGAATCTGCAGGAGGTGACTAT 58.621 45.455 15.13 0.00 44.43 2.12
1385 2181 3.482156 TCATTTCTAGCTCCTGCATCC 57.518 47.619 0.00 0.00 42.74 3.51
1386 2182 3.752222 CCATCATTTCTAGCTCCTGCATC 59.248 47.826 0.00 0.00 42.74 3.91
1388 2184 2.507058 ACCATCATTTCTAGCTCCTGCA 59.493 45.455 0.00 0.00 42.74 4.41
1391 2187 4.215908 TCGTACCATCATTTCTAGCTCCT 58.784 43.478 0.00 0.00 0.00 3.69
1392 2188 4.585955 TCGTACCATCATTTCTAGCTCC 57.414 45.455 0.00 0.00 0.00 4.70
1393 2189 5.773575 TCATCGTACCATCATTTCTAGCTC 58.226 41.667 0.00 0.00 0.00 4.09
1397 2193 8.094548 CCCTAAATCATCGTACCATCATTTCTA 58.905 37.037 0.00 0.00 0.00 2.10
1408 2204 3.069729 ACTCAGGCCCTAAATCATCGTAC 59.930 47.826 0.00 0.00 0.00 3.67
1410 2206 2.119495 ACTCAGGCCCTAAATCATCGT 58.881 47.619 0.00 0.00 0.00 3.73
1411 2207 2.103094 TCACTCAGGCCCTAAATCATCG 59.897 50.000 0.00 0.00 0.00 3.84
1418 2214 0.824109 CGACATCACTCAGGCCCTAA 59.176 55.000 0.00 0.00 0.00 2.69
1423 2219 0.101399 ATCGACGACATCACTCAGGC 59.899 55.000 0.00 0.00 0.00 4.85
1424 2220 2.287069 GGTATCGACGACATCACTCAGG 60.287 54.545 0.00 0.00 0.00 3.86
1426 2222 2.361789 TGGTATCGACGACATCACTCA 58.638 47.619 0.00 0.00 0.00 3.41
1427 2223 3.243101 ACATGGTATCGACGACATCACTC 60.243 47.826 0.00 0.00 0.00 3.51
1433 2232 2.734175 GCTGAACATGGTATCGACGACA 60.734 50.000 0.00 0.00 0.00 4.35
1434 2233 1.852895 GCTGAACATGGTATCGACGAC 59.147 52.381 0.00 0.00 0.00 4.34
1436 2235 1.202417 AGGCTGAACATGGTATCGACG 60.202 52.381 0.00 0.00 0.00 5.12
1448 2258 2.439507 TGATTCCAGGGATAGGCTGAAC 59.560 50.000 0.00 0.00 0.00 3.18
1455 2265 6.598457 CAGCTGAATTATGATTCCAGGGATAG 59.402 42.308 8.42 0.00 40.79 2.08
1458 2268 4.722220 CAGCTGAATTATGATTCCAGGGA 58.278 43.478 8.42 0.00 40.79 4.20
1463 2273 6.474751 GTGAAAAGCAGCTGAATTATGATTCC 59.525 38.462 20.43 0.00 40.79 3.01
1470 2280 3.407698 TCGGTGAAAAGCAGCTGAATTA 58.592 40.909 20.43 0.00 42.75 1.40
1490 2337 2.315925 TCGGAGCTGGAATCACAATC 57.684 50.000 0.00 0.00 0.00 2.67
1497 2344 7.044798 GCTATAATCTATTTCGGAGCTGGAAT 58.955 38.462 0.00 0.00 0.00 3.01
1501 2348 6.884096 CAGCTATAATCTATTTCGGAGCTG 57.116 41.667 6.20 6.20 46.71 4.24
1502 2349 5.047021 TGCAGCTATAATCTATTTCGGAGCT 60.047 40.000 0.00 0.00 39.54 4.09
1504 2351 6.159293 TGTGCAGCTATAATCTATTTCGGAG 58.841 40.000 0.00 0.00 0.00 4.63
1505 2352 6.096673 TGTGCAGCTATAATCTATTTCGGA 57.903 37.500 0.00 0.00 0.00 4.55
1507 2354 7.095481 ACACATGTGCAGCTATAATCTATTTCG 60.095 37.037 25.68 0.00 0.00 3.46
1508 2355 8.013947 CACACATGTGCAGCTATAATCTATTTC 58.986 37.037 25.68 0.00 39.39 2.17
1509 2356 7.040892 CCACACATGTGCAGCTATAATCTATTT 60.041 37.037 25.68 0.00 44.34 1.40
1510 2357 6.429078 CCACACATGTGCAGCTATAATCTATT 59.571 38.462 25.68 0.00 44.34 1.73
1511 2358 5.936372 CCACACATGTGCAGCTATAATCTAT 59.064 40.000 25.68 0.00 44.34 1.98
1513 2360 4.132336 CCACACATGTGCAGCTATAATCT 58.868 43.478 25.68 0.00 44.34 2.40
1515 2362 3.628942 CACCACACATGTGCAGCTATAAT 59.371 43.478 25.68 0.00 44.34 1.28
1516 2363 3.009026 CACCACACATGTGCAGCTATAA 58.991 45.455 25.68 0.00 44.34 0.98
1517 2364 2.631267 CACCACACATGTGCAGCTATA 58.369 47.619 25.68 0.00 44.34 1.31
1519 2366 0.606130 CCACCACACATGTGCAGCTA 60.606 55.000 25.68 0.00 44.34 3.32
1520 2367 1.900016 CCACCACACATGTGCAGCT 60.900 57.895 25.68 3.02 44.34 4.24
1521 2368 2.646719 CCACCACACATGTGCAGC 59.353 61.111 25.68 0.00 44.34 5.25
1522 2369 0.822944 TTCCCACCACACATGTGCAG 60.823 55.000 25.68 18.63 44.34 4.41
1524 2371 0.968405 ATTTCCCACCACACATGTGC 59.032 50.000 25.68 0.00 44.34 4.57
1525 2372 2.229543 CTCATTTCCCACCACACATGTG 59.770 50.000 24.25 24.25 45.23 3.21
1526 2373 2.108075 TCTCATTTCCCACCACACATGT 59.892 45.455 0.00 0.00 0.00 3.21
1527 2374 2.794103 TCTCATTTCCCACCACACATG 58.206 47.619 0.00 0.00 0.00 3.21
1528 2375 3.010472 TGATCTCATTTCCCACCACACAT 59.990 43.478 0.00 0.00 0.00 3.21
1529 2376 2.374839 TGATCTCATTTCCCACCACACA 59.625 45.455 0.00 0.00 0.00 3.72
1531 2378 3.524789 AGATGATCTCATTTCCCACCACA 59.475 43.478 0.00 0.00 36.57 4.17
1533 2380 4.868172 AAGATGATCTCATTTCCCACCA 57.132 40.909 0.00 0.00 36.57 4.17
1534 2381 7.723172 AGAAATAAGATGATCTCATTTCCCACC 59.277 37.037 21.71 3.78 36.64 4.61
1535 2382 8.688747 AGAAATAAGATGATCTCATTTCCCAC 57.311 34.615 21.71 4.08 36.64 4.61
1557 2417 9.890629 TGTACTTAGTACTACCTCGAATAAGAA 57.109 33.333 21.20 0.00 39.49 2.52
1585 2445 2.694213 TGAATCACCACACATGTACGG 58.306 47.619 10.46 10.46 0.00 4.02
1587 2447 5.106712 ACGAAATGAATCACCACACATGTAC 60.107 40.000 0.00 0.00 0.00 2.90
1598 2458 6.696148 ACGTTATCTCCTACGAAATGAATCAC 59.304 38.462 0.00 0.00 40.03 3.06
1610 2470 6.448207 ACTACTCCAAACGTTATCTCCTAC 57.552 41.667 0.00 0.00 0.00 3.18
1613 2473 6.533012 GGTAAACTACTCCAAACGTTATCTCC 59.467 42.308 0.00 0.00 0.00 3.71
1650 2511 4.343814 TCCATAACCATCGCAGAGAACATA 59.656 41.667 0.00 0.00 43.63 2.29
1661 2522 5.817296 CACCATATACCATCCATAACCATCG 59.183 44.000 0.00 0.00 0.00 3.84
1667 2528 9.111519 ACAGAATACACCATATACCATCCATAA 57.888 33.333 0.00 0.00 0.00 1.90
1672 2533 8.150945 AGTGAACAGAATACACCATATACCATC 58.849 37.037 0.00 0.00 35.47 3.51
1673 2534 8.034313 AGTGAACAGAATACACCATATACCAT 57.966 34.615 0.00 0.00 35.47 3.55
1676 2537 9.035607 CAAGAGTGAACAGAATACACCATATAC 57.964 37.037 0.00 0.00 35.47 1.47
1704 2565 8.480643 ACTGATAAATTTGTACTAGTGTCTGC 57.519 34.615 5.39 0.00 0.00 4.26
1728 2589 5.496133 AATGCAGAGCTGATTGTGATAAC 57.504 39.130 0.85 0.00 0.00 1.89
1731 2592 6.512903 CGATTTAATGCAGAGCTGATTGTGAT 60.513 38.462 0.85 0.00 0.00 3.06
1742 2603 9.201127 TGAAAGATATCTCGATTTAATGCAGAG 57.799 33.333 5.51 0.00 0.00 3.35
1829 2694 7.708752 ATCGAAGATCACTTAAGAGTGGATTTC 59.291 37.037 10.09 10.65 46.22 2.17
1830 2695 7.493971 CATCGAAGATCACTTAAGAGTGGATTT 59.506 37.037 10.09 0.00 46.22 2.17
1831 2696 6.983307 CATCGAAGATCACTTAAGAGTGGATT 59.017 38.462 10.09 0.00 46.22 3.01
1832 2697 6.097554 ACATCGAAGATCACTTAAGAGTGGAT 59.902 38.462 10.09 6.46 46.22 3.41
1833 2698 5.419155 ACATCGAAGATCACTTAAGAGTGGA 59.581 40.000 10.09 1.63 46.22 4.02
1834 2699 5.655488 ACATCGAAGATCACTTAAGAGTGG 58.345 41.667 10.09 0.00 46.22 4.00
1836 2701 6.587990 CACAACATCGAAGATCACTTAAGAGT 59.412 38.462 10.09 0.00 45.12 3.24
1837 2702 6.454848 GCACAACATCGAAGATCACTTAAGAG 60.455 42.308 10.09 0.59 45.12 2.85
1838 2703 5.348724 GCACAACATCGAAGATCACTTAAGA 59.651 40.000 10.09 0.00 45.12 2.10
1839 2704 5.120674 TGCACAACATCGAAGATCACTTAAG 59.879 40.000 0.00 0.00 45.12 1.85
1840 2705 4.994217 TGCACAACATCGAAGATCACTTAA 59.006 37.500 0.00 0.00 45.12 1.85
1853 2739 1.207593 GTCCGTGCTGCACAACATC 59.792 57.895 29.86 12.72 33.40 3.06
1881 2767 3.299585 CGTGTCTCGGCGCTTATG 58.700 61.111 7.64 0.00 35.71 1.90
2040 2928 8.907222 ATGCACCTGAAAAGATTTTAACAAAT 57.093 26.923 0.00 0.00 35.12 2.32
2041 2929 9.995003 ATATGCACCTGAAAAGATTTTAACAAA 57.005 25.926 0.00 0.00 0.00 2.83
2249 3142 0.534877 ACTTCATTGTCACGGCAGCA 60.535 50.000 0.00 0.00 0.00 4.41
2252 3145 1.333308 CAACACTTCATTGTCACGGCA 59.667 47.619 0.00 0.00 0.00 5.69
2255 3148 1.660052 CCGCAACACTTCATTGTCACG 60.660 52.381 0.00 0.00 0.00 4.35
2273 3166 1.079819 AACCACTCTGACATCGCCG 60.080 57.895 0.00 0.00 0.00 6.46
2323 3216 0.392998 CGAGGGTGGTGGAAATGGAG 60.393 60.000 0.00 0.00 0.00 3.86
2342 3235 2.880890 GACCACATTGATGTATCTGCCC 59.119 50.000 0.00 0.00 39.39 5.36
2371 3264 2.128535 TCACCCTAAACACCACTCCAA 58.871 47.619 0.00 0.00 0.00 3.53
2377 3270 3.137544 ACTGAACATCACCCTAAACACCA 59.862 43.478 0.00 0.00 0.00 4.17
2434 3327 4.202151 GGAGGAACAGCAATGTCTTGTTTT 60.202 41.667 0.00 0.00 34.69 2.43
2472 3365 3.028850 AGAGGAATGGATTTGGCATGTG 58.971 45.455 0.00 0.00 0.00 3.21
2513 3406 4.509970 TGTATGTTTGACACCAGAAACTCG 59.490 41.667 0.00 0.00 33.92 4.18
2670 3563 2.719046 GGAATGCGTTTTTCGTCACAAG 59.281 45.455 0.00 0.00 42.13 3.16
2694 3587 1.802365 AGATAAACAACCGCGTGGAAC 59.198 47.619 24.59 0.00 39.21 3.62
2898 3791 3.118847 TCAAGCTCCTCATTGACTGCTAG 60.119 47.826 0.00 0.00 30.67 3.42
2915 3808 0.109412 GTCTTGCATGCAGGTCAAGC 60.109 55.000 26.79 16.25 39.66 4.01
2958 3851 2.620585 GAGAGCAAAGAAACAAGTGGCT 59.379 45.455 0.00 0.00 0.00 4.75
2986 3879 0.683973 AGAGAGGGCAGTGAACACAG 59.316 55.000 7.68 0.49 0.00 3.66
2998 3891 2.172082 TCCTGCAATCATGAAGAGAGGG 59.828 50.000 0.00 0.00 33.54 4.30
3002 3895 3.564644 GGTCATCCTGCAATCATGAAGAG 59.435 47.826 0.00 0.00 33.54 2.85
3066 3959 5.855740 ACGGAAACAAGGGTTTGAAATAA 57.144 34.783 0.00 0.00 46.84 1.40
3074 3967 2.447408 AAGGAACGGAAACAAGGGTT 57.553 45.000 0.00 0.00 39.43 4.11
3081 3974 5.105023 AGGTCTAAGGATAAGGAACGGAAAC 60.105 44.000 0.00 0.00 0.00 2.78
3082 3975 5.028131 AGGTCTAAGGATAAGGAACGGAAA 58.972 41.667 0.00 0.00 0.00 3.13
3083 3976 4.617593 AGGTCTAAGGATAAGGAACGGAA 58.382 43.478 0.00 0.00 0.00 4.30
3085 3978 6.475596 TTAAGGTCTAAGGATAAGGAACGG 57.524 41.667 0.00 0.00 0.00 4.44
3086 3979 7.779073 TCTTTAAGGTCTAAGGATAAGGAACG 58.221 38.462 0.00 0.00 0.00 3.95
3089 3982 9.335211 ACTTTCTTTAAGGTCTAAGGATAAGGA 57.665 33.333 0.00 0.00 38.23 3.36
3090 3983 9.961264 AACTTTCTTTAAGGTCTAAGGATAAGG 57.039 33.333 0.00 0.00 38.23 2.69
3111 4004 7.346751 TGGTATCAAAGAGCAAAGAAACTTT 57.653 32.000 0.00 0.00 33.69 2.66
3114 4007 8.515414 ACTATTGGTATCAAAGAGCAAAGAAAC 58.485 33.333 0.00 0.00 37.79 2.78
3119 4012 7.882791 TGAGAACTATTGGTATCAAAGAGCAAA 59.117 33.333 0.00 0.00 37.79 3.68
3120 4013 7.394016 TGAGAACTATTGGTATCAAAGAGCAA 58.606 34.615 0.00 0.00 38.55 3.91
3121 4014 6.946340 TGAGAACTATTGGTATCAAAGAGCA 58.054 36.000 0.00 0.00 36.36 4.26
3125 4018 7.856145 AGCTTGAGAACTATTGGTATCAAAG 57.144 36.000 3.94 0.71 35.09 2.77
3126 4019 8.514594 CAAAGCTTGAGAACTATTGGTATCAAA 58.485 33.333 0.00 0.00 35.09 2.69
3134 4027 4.083855 TCGTGCAAAGCTTGAGAACTATTG 60.084 41.667 0.00 0.00 0.00 1.90
3139 4032 2.755836 TTCGTGCAAAGCTTGAGAAC 57.244 45.000 0.00 0.00 0.00 3.01
3140 4033 3.314913 TCAATTCGTGCAAAGCTTGAGAA 59.685 39.130 0.00 2.35 0.00 2.87
3142 4035 3.272439 TCAATTCGTGCAAAGCTTGAG 57.728 42.857 0.00 0.00 0.00 3.02
3146 4039 5.049167 TCAAAATTCAATTCGTGCAAAGCT 58.951 33.333 0.00 0.00 0.00 3.74
3171 4065 3.442100 GCTGCATGAGAAAGGTATTTGC 58.558 45.455 0.00 0.00 0.00 3.68
3176 4070 1.001974 ACACGCTGCATGAGAAAGGTA 59.998 47.619 1.44 0.00 0.00 3.08
3177 4071 0.250467 ACACGCTGCATGAGAAAGGT 60.250 50.000 1.44 0.00 0.00 3.50
3299 4193 3.776969 ACAGATACTTGATGAGGAGCCAA 59.223 43.478 0.00 0.00 0.00 4.52
3447 4342 7.253422 ACAAAAGTCTGAACTTCACATTTCAG 58.747 34.615 5.19 5.19 45.07 3.02
3552 4450 2.015736 AGCGTGACATGTCATTCCTC 57.984 50.000 30.10 16.30 42.18 3.71
3559 4457 2.076100 TCATCCAAAGCGTGACATGTC 58.924 47.619 19.27 19.27 0.00 3.06
3560 4458 2.079158 CTCATCCAAAGCGTGACATGT 58.921 47.619 0.00 0.00 0.00 3.21
3561 4459 2.094894 GTCTCATCCAAAGCGTGACATG 59.905 50.000 0.00 0.00 0.00 3.21
3562 4460 2.350522 GTCTCATCCAAAGCGTGACAT 58.649 47.619 0.00 0.00 0.00 3.06
3563 4461 1.795768 GTCTCATCCAAAGCGTGACA 58.204 50.000 0.00 0.00 0.00 3.58
3564 4462 0.716108 CGTCTCATCCAAAGCGTGAC 59.284 55.000 0.00 0.00 0.00 3.67
3566 4464 1.421485 GCGTCTCATCCAAAGCGTG 59.579 57.895 0.00 0.00 0.00 5.34
3567 4465 2.094659 CGCGTCTCATCCAAAGCGT 61.095 57.895 0.00 0.00 42.26 5.07
3568 4466 2.697425 CGCGTCTCATCCAAAGCG 59.303 61.111 0.00 0.00 41.56 4.68
3569 4467 1.696832 GACCGCGTCTCATCCAAAGC 61.697 60.000 4.92 0.00 0.00 3.51
3570 4468 0.389817 TGACCGCGTCTCATCCAAAG 60.390 55.000 4.92 0.00 33.15 2.77
3710 4608 9.766277 TTATTGTGAGTTTTGTTGAATTTTTGC 57.234 25.926 0.00 0.00 0.00 3.68
3812 4712 5.290493 TCACTGTGGACTTACTTTGACAT 57.710 39.130 8.11 0.00 0.00 3.06
3844 4744 5.795939 GTCAACTTACTGTGATACGACTGAG 59.204 44.000 0.00 0.00 0.00 3.35
3851 4751 5.696822 TCAGTCGTCAACTTACTGTGATAC 58.303 41.667 0.00 0.00 41.12 2.24
3859 4759 4.734854 TGTAACGTTCAGTCGTCAACTTAC 59.265 41.667 2.82 0.00 43.38 2.34
3865 4765 3.967401 TGAATGTAACGTTCAGTCGTCA 58.033 40.909 2.82 0.00 43.38 4.35
3876 4776 6.961358 TTTTTGACACGATTGAATGTAACG 57.039 33.333 0.00 0.00 0.00 3.18
3911 4813 1.090728 TGAATATGCGCGCCTTTTGA 58.909 45.000 30.77 11.81 0.00 2.69
3913 4815 2.358898 AGAATGAATATGCGCGCCTTTT 59.641 40.909 30.77 20.21 0.00 2.27
3957 4859 5.836821 TGTAGAGCTGTCGATATCTGTTT 57.163 39.130 0.00 0.00 0.00 2.83
4078 4980 1.596934 GCGACAGGGGATGACAAGA 59.403 57.895 0.00 0.00 0.00 3.02
4117 5019 7.123355 TCATTCCAACAAAAGTCCATTTTCT 57.877 32.000 0.00 0.00 39.11 2.52
4123 5025 6.457355 CATGAATCATTCCAACAAAAGTCCA 58.543 36.000 0.00 0.00 0.00 4.02
4150 5052 2.710377 TGCCGCAGATGAACAAAGTAT 58.290 42.857 0.00 0.00 0.00 2.12
4192 5094 4.455606 GCTATTCAGCTCAGTATGGGTTT 58.544 43.478 0.00 0.00 40.30 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.