Multiple sequence alignment - TraesCS6B01G077200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G077200 chr6B 100.000 3161 0 0 1 3161 53078141 53074981 0.000000e+00 5838.0
1 TraesCS6B01G077200 chr6B 84.821 1232 163 19 963 2177 16320535 16321759 0.000000e+00 1218.0
2 TraesCS6B01G077200 chr6B 82.152 1199 181 15 982 2170 15249517 15248342 0.000000e+00 998.0
3 TraesCS6B01G077200 chr6B 81.696 1191 179 29 994 2177 15715201 15714043 0.000000e+00 955.0
4 TraesCS6B01G077200 chr6B 80.031 1297 226 20 902 2182 670602289 670601010 0.000000e+00 929.0
5 TraesCS6B01G077200 chr6B 94.128 596 35 0 869 1464 16338694 16339289 0.000000e+00 907.0
6 TraesCS6B01G077200 chr6B 84.494 890 107 16 2298 3161 670601404 670600520 0.000000e+00 850.0
7 TraesCS6B01G077200 chr6B 81.982 888 117 25 2305 3161 15248718 15247843 0.000000e+00 713.0
8 TraesCS6B01G077200 chr6B 77.343 1227 239 27 1054 2266 39311147 39312348 0.000000e+00 689.0
9 TraesCS6B01G077200 chr6B 76.348 1391 262 47 811 2177 670592872 670591525 0.000000e+00 684.0
10 TraesCS6B01G077200 chr6B 76.581 1170 232 33 1066 2216 26841872 26840726 3.490000e-169 604.0
11 TraesCS6B01G077200 chr6B 79.559 680 100 25 2305 2954 16256043 16256713 1.730000e-122 449.0
12 TraesCS6B01G077200 chr6B 76.517 379 75 11 2305 2676 14341247 14341618 8.950000e-46 195.0
13 TraesCS6B01G077200 chr6B 89.362 47 3 2 228 272 16338314 16338360 1.220000e-04 58.4
14 TraesCS6B01G077200 chr2B 86.480 1213 142 16 972 2170 89494589 89495793 0.000000e+00 1312.0
15 TraesCS6B01G077200 chr2B 87.582 1071 96 14 213 1261 709515638 709514583 0.000000e+00 1206.0
16 TraesCS6B01G077200 chr2B 81.415 1173 197 12 994 2166 711161420 711162571 0.000000e+00 939.0
17 TraesCS6B01G077200 chr2B 81.859 882 121 19 2305 3161 709486977 709486110 0.000000e+00 706.0
18 TraesCS6B01G077200 chr2B 80.722 887 130 24 2305 3161 89495417 89496292 0.000000e+00 652.0
19 TraesCS6B01G077200 chr2B 82.086 441 42 14 2529 2939 709454768 709454335 3.020000e-90 342.0
20 TraesCS6B01G077200 chr2B 79.167 312 54 8 371 680 778016769 778017071 4.130000e-49 206.0
21 TraesCS6B01G077200 chr2B 79.167 312 54 8 371 680 778022422 778022724 4.130000e-49 206.0
22 TraesCS6B01G077200 chr2B 87.903 124 5 5 97 212 310033808 310033687 1.530000e-28 137.0
23 TraesCS6B01G077200 chr2B 93.407 91 5 1 2996 3085 800554965 800554875 1.980000e-27 134.0
24 TraesCS6B01G077200 chr6D 82.670 1206 172 27 982 2177 33895035 33896213 0.000000e+00 1035.0
25 TraesCS6B01G077200 chr6D 87.179 897 89 9 1408 2304 8802441 8803311 0.000000e+00 996.0
26 TraesCS6B01G077200 chr6D 82.619 886 115 22 2305 3161 8578134 8577259 0.000000e+00 747.0
27 TraesCS6B01G077200 chr6D 77.667 1209 224 36 985 2168 16775759 16774572 0.000000e+00 695.0
28 TraesCS6B01G077200 chr6D 76.000 375 80 9 2305 2674 8655474 8655105 5.380000e-43 185.0
29 TraesCS6B01G077200 chr6D 88.333 120 14 0 3042 3161 34019219 34019338 9.140000e-31 145.0
30 TraesCS6B01G077200 chr6D 89.720 107 7 3 109 212 168774955 168775060 1.980000e-27 134.0
31 TraesCS6B01G077200 chr3B 81.728 1204 191 19 979 2168 778342923 778341735 0.000000e+00 977.0
32 TraesCS6B01G077200 chr3B 97.872 94 1 1 109 202 6040046 6040138 9.070000e-36 161.0
33 TraesCS6B01G077200 chr3D 83.077 1040 147 18 979 2004 582879824 582880848 0.000000e+00 918.0
34 TraesCS6B01G077200 chr3D 99.074 108 1 0 1 108 281314501 281314394 8.950000e-46 195.0
35 TraesCS6B01G077200 chr5D 81.860 860 117 16 2319 3159 42074402 42075241 0.000000e+00 688.0
36 TraesCS6B01G077200 chrUn 84.961 645 71 12 2478 3097 65789797 65789154 5.750000e-177 630.0
37 TraesCS6B01G077200 chrUn 97.872 94 1 1 109 202 358547390 358547482 9.070000e-36 161.0
38 TraesCS6B01G077200 chrUn 90.265 113 1 2 109 212 86448741 86448852 4.250000e-29 139.0
39 TraesCS6B01G077200 chr6A 89.859 355 26 6 2815 3161 9366103 9366455 6.220000e-122 448.0
40 TraesCS6B01G077200 chr6A 91.358 81 6 1 2976 3056 35567570 35567491 3.330000e-20 110.0
41 TraesCS6B01G077200 chr7B 84.319 389 54 7 2305 2690 123656357 123656741 1.070000e-99 374.0
42 TraesCS6B01G077200 chr7A 84.319 389 54 7 2305 2690 162578631 162579015 1.070000e-99 374.0
43 TraesCS6B01G077200 chr4B 82.558 258 30 9 2706 2954 402809353 402809604 2.470000e-51 213.0
44 TraesCS6B01G077200 chr7D 99.074 108 1 0 1 108 382030640 382030747 8.950000e-46 195.0
45 TraesCS6B01G077200 chr4D 99.074 108 1 0 1 108 123521701 123521808 8.950000e-46 195.0
46 TraesCS6B01G077200 chr4D 99.074 108 1 0 1 108 123665194 123665301 8.950000e-46 195.0
47 TraesCS6B01G077200 chr4D 99.074 108 1 0 1 108 135007086 135007193 8.950000e-46 195.0
48 TraesCS6B01G077200 chr4D 99.074 108 1 0 1 108 241094633 241094740 8.950000e-46 195.0
49 TraesCS6B01G077200 chr4D 99.074 108 1 0 1 108 241144109 241144216 8.950000e-46 195.0
50 TraesCS6B01G077200 chr2D 99.074 108 1 0 1 108 642936934 642936827 8.950000e-46 195.0
51 TraesCS6B01G077200 chr1A 99.074 108 1 0 1 108 278505480 278505373 8.950000e-46 195.0
52 TraesCS6B01G077200 chr1D 91.589 107 5 3 109 212 351071274 351071169 9.140000e-31 145.0
53 TraesCS6B01G077200 chr5B 87.500 120 4 3 97 207 34115057 34115174 9.200000e-26 128.0
54 TraesCS6B01G077200 chr5A 87.179 78 5 4 106 179 16653466 16653542 2.020000e-12 84.2
55 TraesCS6B01G077200 chr5A 87.179 78 5 4 106 179 16677128 16677204 2.020000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G077200 chr6B 53074981 53078141 3160 True 5838.0 5838 100.0000 1 3161 1 chr6B.!!$R3 3160
1 TraesCS6B01G077200 chr6B 16320535 16321759 1224 False 1218.0 1218 84.8210 963 2177 1 chr6B.!!$F3 1214
2 TraesCS6B01G077200 chr6B 15714043 15715201 1158 True 955.0 955 81.6960 994 2177 1 chr6B.!!$R1 1183
3 TraesCS6B01G077200 chr6B 670600520 670602289 1769 True 889.5 929 82.2625 902 3161 2 chr6B.!!$R6 2259
4 TraesCS6B01G077200 chr6B 15247843 15249517 1674 True 855.5 998 82.0670 982 3161 2 chr6B.!!$R5 2179
5 TraesCS6B01G077200 chr6B 39311147 39312348 1201 False 689.0 689 77.3430 1054 2266 1 chr6B.!!$F4 1212
6 TraesCS6B01G077200 chr6B 670591525 670592872 1347 True 684.0 684 76.3480 811 2177 1 chr6B.!!$R4 1366
7 TraesCS6B01G077200 chr6B 26840726 26841872 1146 True 604.0 604 76.5810 1066 2216 1 chr6B.!!$R2 1150
8 TraesCS6B01G077200 chr6B 16338314 16339289 975 False 482.7 907 91.7450 228 1464 2 chr6B.!!$F5 1236
9 TraesCS6B01G077200 chr6B 16256043 16256713 670 False 449.0 449 79.5590 2305 2954 1 chr6B.!!$F2 649
10 TraesCS6B01G077200 chr2B 709514583 709515638 1055 True 1206.0 1206 87.5820 213 1261 1 chr2B.!!$R4 1048
11 TraesCS6B01G077200 chr2B 89494589 89496292 1703 False 982.0 1312 83.6010 972 3161 2 chr2B.!!$F4 2189
12 TraesCS6B01G077200 chr2B 711161420 711162571 1151 False 939.0 939 81.4150 994 2166 1 chr2B.!!$F1 1172
13 TraesCS6B01G077200 chr2B 709486110 709486977 867 True 706.0 706 81.8590 2305 3161 1 chr2B.!!$R3 856
14 TraesCS6B01G077200 chr6D 33895035 33896213 1178 False 1035.0 1035 82.6700 982 2177 1 chr6D.!!$F2 1195
15 TraesCS6B01G077200 chr6D 8802441 8803311 870 False 996.0 996 87.1790 1408 2304 1 chr6D.!!$F1 896
16 TraesCS6B01G077200 chr6D 8577259 8578134 875 True 747.0 747 82.6190 2305 3161 1 chr6D.!!$R1 856
17 TraesCS6B01G077200 chr6D 16774572 16775759 1187 True 695.0 695 77.6670 985 2168 1 chr6D.!!$R3 1183
18 TraesCS6B01G077200 chr3B 778341735 778342923 1188 True 977.0 977 81.7280 979 2168 1 chr3B.!!$R1 1189
19 TraesCS6B01G077200 chr3D 582879824 582880848 1024 False 918.0 918 83.0770 979 2004 1 chr3D.!!$F1 1025
20 TraesCS6B01G077200 chr5D 42074402 42075241 839 False 688.0 688 81.8600 2319 3159 1 chr5D.!!$F1 840
21 TraesCS6B01G077200 chrUn 65789154 65789797 643 True 630.0 630 84.9610 2478 3097 1 chrUn.!!$R1 619

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
128 129 0.033109 TTCCAGAGATCGGAGCCAGA 60.033 55.0 0.00 0.0 33.01 3.86 F
207 208 0.106116 ACCCGGTTTTGGCCTTGTTA 60.106 50.0 3.32 0.0 0.00 2.41 F
1846 1994 0.108615 ATCGTTGCTGAAGAGGTCCG 60.109 55.0 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2119 2267 0.108945 GGCACTTCATCTTTGCAGGC 60.109 55.0 0.0 0.0 38.04 4.85 R
2120 2268 0.169672 CGGCACTTCATCTTTGCAGG 59.830 55.0 0.0 0.0 38.04 4.85 R
2875 3084 0.912486 AGGTAGATGGAGGGTTGCAC 59.088 55.0 0.0 0.0 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.793026 CACTTCTGAATGACTCCTTTAGC 57.207 43.478 0.00 0.00 0.00 3.09
23 24 5.240891 CACTTCTGAATGACTCCTTTAGCA 58.759 41.667 0.00 0.00 0.00 3.49
24 25 5.121454 CACTTCTGAATGACTCCTTTAGCAC 59.879 44.000 0.00 0.00 0.00 4.40
25 26 5.012561 ACTTCTGAATGACTCCTTTAGCACT 59.987 40.000 0.00 0.00 0.00 4.40
26 27 5.078411 TCTGAATGACTCCTTTAGCACTC 57.922 43.478 0.00 0.00 0.00 3.51
27 28 4.774726 TCTGAATGACTCCTTTAGCACTCT 59.225 41.667 0.00 0.00 0.00 3.24
28 29 5.247110 TCTGAATGACTCCTTTAGCACTCTT 59.753 40.000 0.00 0.00 0.00 2.85
29 30 5.869579 TGAATGACTCCTTTAGCACTCTTT 58.130 37.500 0.00 0.00 0.00 2.52
30 31 6.299141 TGAATGACTCCTTTAGCACTCTTTT 58.701 36.000 0.00 0.00 0.00 2.27
31 32 6.772716 TGAATGACTCCTTTAGCACTCTTTTT 59.227 34.615 0.00 0.00 0.00 1.94
71 72 7.991084 AGAAACAGTTTACCTTTACCATACC 57.009 36.000 0.00 0.00 0.00 2.73
72 73 7.752638 AGAAACAGTTTACCTTTACCATACCT 58.247 34.615 0.00 0.00 0.00 3.08
73 74 8.222637 AGAAACAGTTTACCTTTACCATACCTT 58.777 33.333 0.00 0.00 0.00 3.50
74 75 7.991084 AACAGTTTACCTTTACCATACCTTC 57.009 36.000 0.00 0.00 0.00 3.46
75 76 6.479006 ACAGTTTACCTTTACCATACCTTCC 58.521 40.000 0.00 0.00 0.00 3.46
76 77 6.044637 ACAGTTTACCTTTACCATACCTTCCA 59.955 38.462 0.00 0.00 0.00 3.53
77 78 6.943718 CAGTTTACCTTTACCATACCTTCCAA 59.056 38.462 0.00 0.00 0.00 3.53
78 79 7.120726 CAGTTTACCTTTACCATACCTTCCAAG 59.879 40.741 0.00 0.00 0.00 3.61
79 80 3.964411 ACCTTTACCATACCTTCCAAGC 58.036 45.455 0.00 0.00 0.00 4.01
80 81 3.332485 ACCTTTACCATACCTTCCAAGCA 59.668 43.478 0.00 0.00 0.00 3.91
81 82 4.202631 ACCTTTACCATACCTTCCAAGCAA 60.203 41.667 0.00 0.00 0.00 3.91
82 83 4.399303 CCTTTACCATACCTTCCAAGCAAG 59.601 45.833 0.00 0.00 0.00 4.01
83 84 4.919774 TTACCATACCTTCCAAGCAAGA 57.080 40.909 0.00 0.00 0.00 3.02
84 85 3.356529 ACCATACCTTCCAAGCAAGAG 57.643 47.619 0.00 0.00 0.00 2.85
85 86 2.644798 ACCATACCTTCCAAGCAAGAGT 59.355 45.455 0.00 0.00 0.00 3.24
86 87 3.012518 CCATACCTTCCAAGCAAGAGTG 58.987 50.000 0.00 0.00 0.00 3.51
87 88 3.560025 CCATACCTTCCAAGCAAGAGTGT 60.560 47.826 0.00 0.00 0.00 3.55
88 89 2.736670 ACCTTCCAAGCAAGAGTGTT 57.263 45.000 0.00 0.00 0.00 3.32
89 90 3.018423 ACCTTCCAAGCAAGAGTGTTT 57.982 42.857 0.00 0.00 0.00 2.83
90 91 3.365472 ACCTTCCAAGCAAGAGTGTTTT 58.635 40.909 0.00 0.00 0.00 2.43
91 92 4.532834 ACCTTCCAAGCAAGAGTGTTTTA 58.467 39.130 0.00 0.00 0.00 1.52
92 93 5.140454 ACCTTCCAAGCAAGAGTGTTTTAT 58.860 37.500 0.00 0.00 0.00 1.40
93 94 5.598417 ACCTTCCAAGCAAGAGTGTTTTATT 59.402 36.000 0.00 0.00 0.00 1.40
94 95 5.922544 CCTTCCAAGCAAGAGTGTTTTATTG 59.077 40.000 0.00 0.00 0.00 1.90
95 96 4.870363 TCCAAGCAAGAGTGTTTTATTGC 58.130 39.130 0.65 0.65 46.50 3.56
103 104 8.519492 GCAAGAGTGTTTTATTGCAAGATTAA 57.481 30.769 4.94 0.00 45.66 1.40
104 105 8.642020 GCAAGAGTGTTTTATTGCAAGATTAAG 58.358 33.333 4.94 0.00 45.66 1.85
105 106 9.683069 CAAGAGTGTTTTATTGCAAGATTAAGT 57.317 29.630 4.94 0.00 0.00 2.24
115 116 9.733556 TTATTGCAAGATTAAGTTACTTCCAGA 57.266 29.630 4.94 0.00 0.00 3.86
116 117 7.672983 TTGCAAGATTAAGTTACTTCCAGAG 57.327 36.000 0.00 0.00 0.00 3.35
117 118 7.004555 TGCAAGATTAAGTTACTTCCAGAGA 57.995 36.000 0.00 0.00 0.00 3.10
118 119 7.624549 TGCAAGATTAAGTTACTTCCAGAGAT 58.375 34.615 0.00 0.00 0.00 2.75
119 120 7.766278 TGCAAGATTAAGTTACTTCCAGAGATC 59.234 37.037 0.00 0.00 0.00 2.75
120 121 7.043059 GCAAGATTAAGTTACTTCCAGAGATCG 60.043 40.741 0.00 0.00 0.00 3.69
121 122 7.045126 AGATTAAGTTACTTCCAGAGATCGG 57.955 40.000 0.00 0.00 0.00 4.18
122 123 6.834451 AGATTAAGTTACTTCCAGAGATCGGA 59.166 38.462 0.00 0.00 0.00 4.55
123 124 4.993029 AAGTTACTTCCAGAGATCGGAG 57.007 45.455 0.00 0.00 33.01 4.63
124 125 2.691011 AGTTACTTCCAGAGATCGGAGC 59.309 50.000 0.00 0.00 33.01 4.70
125 126 1.693627 TACTTCCAGAGATCGGAGCC 58.306 55.000 0.00 0.00 33.01 4.70
126 127 0.324738 ACTTCCAGAGATCGGAGCCA 60.325 55.000 0.00 0.00 33.01 4.75
127 128 0.388659 CTTCCAGAGATCGGAGCCAG 59.611 60.000 0.00 0.00 33.01 4.85
128 129 0.033109 TTCCAGAGATCGGAGCCAGA 60.033 55.000 0.00 0.00 33.01 3.86
129 130 0.753479 TCCAGAGATCGGAGCCAGAC 60.753 60.000 0.00 0.00 0.00 3.51
130 131 1.039785 CCAGAGATCGGAGCCAGACA 61.040 60.000 0.00 0.00 0.00 3.41
131 132 0.820226 CAGAGATCGGAGCCAGACAA 59.180 55.000 0.00 0.00 0.00 3.18
132 133 1.205655 CAGAGATCGGAGCCAGACAAA 59.794 52.381 0.00 0.00 0.00 2.83
133 134 1.480137 AGAGATCGGAGCCAGACAAAG 59.520 52.381 0.00 0.00 0.00 2.77
134 135 1.478510 GAGATCGGAGCCAGACAAAGA 59.521 52.381 0.00 0.00 0.00 2.52
135 136 2.102252 GAGATCGGAGCCAGACAAAGAT 59.898 50.000 0.00 0.00 0.00 2.40
136 137 3.300388 AGATCGGAGCCAGACAAAGATA 58.700 45.455 0.00 0.00 0.00 1.98
137 138 3.706594 AGATCGGAGCCAGACAAAGATAA 59.293 43.478 0.00 0.00 0.00 1.75
138 139 3.526931 TCGGAGCCAGACAAAGATAAG 57.473 47.619 0.00 0.00 0.00 1.73
139 140 3.096852 TCGGAGCCAGACAAAGATAAGA 58.903 45.455 0.00 0.00 0.00 2.10
140 141 3.119101 TCGGAGCCAGACAAAGATAAGAC 60.119 47.826 0.00 0.00 0.00 3.01
141 142 3.118956 CGGAGCCAGACAAAGATAAGACT 60.119 47.826 0.00 0.00 0.00 3.24
142 143 4.438148 GGAGCCAGACAAAGATAAGACTC 58.562 47.826 0.00 0.00 0.00 3.36
143 144 4.438148 GAGCCAGACAAAGATAAGACTCC 58.562 47.826 0.00 0.00 0.00 3.85
144 145 3.840666 AGCCAGACAAAGATAAGACTCCA 59.159 43.478 0.00 0.00 0.00 3.86
145 146 3.935828 GCCAGACAAAGATAAGACTCCAC 59.064 47.826 0.00 0.00 0.00 4.02
146 147 4.177026 CCAGACAAAGATAAGACTCCACG 58.823 47.826 0.00 0.00 0.00 4.94
147 148 4.177026 CAGACAAAGATAAGACTCCACGG 58.823 47.826 0.00 0.00 0.00 4.94
148 149 2.930682 GACAAAGATAAGACTCCACGGC 59.069 50.000 0.00 0.00 0.00 5.68
149 150 1.927174 CAAAGATAAGACTCCACGGCG 59.073 52.381 4.80 4.80 0.00 6.46
150 151 0.460311 AAGATAAGACTCCACGGCGG 59.540 55.000 13.24 0.00 0.00 6.13
151 152 1.591863 GATAAGACTCCACGGCGGC 60.592 63.158 13.24 0.00 33.14 6.53
152 153 2.292794 GATAAGACTCCACGGCGGCA 62.293 60.000 13.24 0.00 33.14 5.69
153 154 2.573609 ATAAGACTCCACGGCGGCAC 62.574 60.000 13.24 0.00 33.14 5.01
166 167 3.975246 GGCACGATCGGGTCAAAA 58.025 55.556 18.85 0.00 0.00 2.44
167 168 2.249692 GGCACGATCGGGTCAAAAA 58.750 52.632 18.85 0.00 0.00 1.94
168 169 0.808755 GGCACGATCGGGTCAAAAAT 59.191 50.000 18.85 0.00 0.00 1.82
169 170 1.467374 GGCACGATCGGGTCAAAAATG 60.467 52.381 18.85 4.58 0.00 2.32
170 171 1.466950 GCACGATCGGGTCAAAAATGA 59.533 47.619 20.26 0.00 0.00 2.57
171 172 2.476185 GCACGATCGGGTCAAAAATGAG 60.476 50.000 20.26 0.00 0.00 2.90
172 173 2.742053 CACGATCGGGTCAAAAATGAGT 59.258 45.455 20.98 0.00 0.00 3.41
173 174 3.000727 ACGATCGGGTCAAAAATGAGTC 58.999 45.455 20.98 0.00 0.00 3.36
174 175 3.000041 CGATCGGGTCAAAAATGAGTCA 59.000 45.455 7.38 0.00 0.00 3.41
175 176 3.435327 CGATCGGGTCAAAAATGAGTCAA 59.565 43.478 7.38 0.00 0.00 3.18
176 177 4.083537 CGATCGGGTCAAAAATGAGTCAAA 60.084 41.667 7.38 0.00 0.00 2.69
177 178 5.561919 CGATCGGGTCAAAAATGAGTCAAAA 60.562 40.000 7.38 0.00 0.00 2.44
178 179 5.584253 TCGGGTCAAAAATGAGTCAAAAA 57.416 34.783 0.00 0.00 0.00 1.94
179 180 5.344884 TCGGGTCAAAAATGAGTCAAAAAC 58.655 37.500 0.00 0.00 0.00 2.43
180 181 5.126384 TCGGGTCAAAAATGAGTCAAAAACT 59.874 36.000 0.00 0.00 42.42 2.66
181 182 5.810074 CGGGTCAAAAATGAGTCAAAAACTT 59.190 36.000 0.00 0.00 38.74 2.66
182 183 6.237808 CGGGTCAAAAATGAGTCAAAAACTTG 60.238 38.462 0.00 0.00 38.74 3.16
183 184 6.593770 GGGTCAAAAATGAGTCAAAAACTTGT 59.406 34.615 0.00 0.00 38.74 3.16
184 185 7.762159 GGGTCAAAAATGAGTCAAAAACTTGTA 59.238 33.333 0.00 0.00 38.74 2.41
185 186 9.145865 GGTCAAAAATGAGTCAAAAACTTGTAA 57.854 29.630 0.00 0.00 38.74 2.41
191 192 8.487313 AATGAGTCAAAAACTTGTAAAAACCC 57.513 30.769 0.00 0.00 38.74 4.11
192 193 6.094061 TGAGTCAAAAACTTGTAAAAACCCG 58.906 36.000 0.00 0.00 38.74 5.28
193 194 5.412640 AGTCAAAAACTTGTAAAAACCCGG 58.587 37.500 0.00 0.00 33.03 5.73
194 195 5.047164 AGTCAAAAACTTGTAAAAACCCGGT 60.047 36.000 0.00 0.00 33.03 5.28
195 196 5.638657 GTCAAAAACTTGTAAAAACCCGGTT 59.361 36.000 0.00 0.00 0.00 4.44
196 197 6.147492 GTCAAAAACTTGTAAAAACCCGGTTT 59.853 34.615 9.92 9.92 37.34 3.27
197 198 6.709397 TCAAAAACTTGTAAAAACCCGGTTTT 59.291 30.769 20.59 20.59 45.94 2.43
198 199 6.483385 AAAACTTGTAAAAACCCGGTTTTG 57.517 33.333 25.58 16.12 43.67 2.44
199 200 4.126208 ACTTGTAAAAACCCGGTTTTGG 57.874 40.909 25.58 16.05 43.67 3.28
200 201 2.598686 TGTAAAAACCCGGTTTTGGC 57.401 45.000 25.58 20.53 43.67 4.52
201 202 1.138464 TGTAAAAACCCGGTTTTGGCC 59.862 47.619 25.58 17.04 43.67 5.36
202 203 1.413445 GTAAAAACCCGGTTTTGGCCT 59.587 47.619 25.58 14.23 43.67 5.19
203 204 0.913205 AAAAACCCGGTTTTGGCCTT 59.087 45.000 25.58 9.62 43.67 4.35
204 205 0.179234 AAAACCCGGTTTTGGCCTTG 59.821 50.000 24.54 0.00 42.98 3.61
205 206 0.978667 AAACCCGGTTTTGGCCTTGT 60.979 50.000 9.92 0.00 31.10 3.16
206 207 0.978667 AACCCGGTTTTGGCCTTGTT 60.979 50.000 3.32 0.00 0.00 2.83
207 208 0.106116 ACCCGGTTTTGGCCTTGTTA 60.106 50.000 3.32 0.00 0.00 2.41
208 209 0.315886 CCCGGTTTTGGCCTTGTTAC 59.684 55.000 3.32 0.00 0.00 2.50
209 210 1.324383 CCGGTTTTGGCCTTGTTACT 58.676 50.000 3.32 0.00 0.00 2.24
210 211 2.506444 CCGGTTTTGGCCTTGTTACTA 58.494 47.619 3.32 0.00 0.00 1.82
211 212 2.885894 CCGGTTTTGGCCTTGTTACTAA 59.114 45.455 3.32 0.00 0.00 2.24
217 218 7.306925 CGGTTTTGGCCTTGTTACTAATTTTTC 60.307 37.037 3.32 0.00 0.00 2.29
222 223 8.012957 TGGCCTTGTTACTAATTTTTCTTGAA 57.987 30.769 3.32 0.00 0.00 2.69
224 225 8.141909 GGCCTTGTTACTAATTTTTCTTGAACT 58.858 33.333 0.00 0.00 0.00 3.01
263 264 1.512926 AGAAACGCAAGCTCGTCAAT 58.487 45.000 0.47 0.00 42.46 2.57
310 377 5.302360 TCTAAGGCTCTTTTTAGAAACGCA 58.698 37.500 0.00 0.00 34.04 5.24
347 414 1.878953 TTTTCGAGGTCTCACAAGCC 58.121 50.000 0.00 0.00 0.00 4.35
354 421 3.555168 CGAGGTCTCACAAGCCTAGTTTT 60.555 47.826 0.00 0.00 31.64 2.43
355 422 4.390264 GAGGTCTCACAAGCCTAGTTTTT 58.610 43.478 0.00 0.00 31.64 1.94
398 465 0.606604 GGTGAGCCTGTCGGTTTAGA 59.393 55.000 0.00 0.00 0.00 2.10
417 484 3.999046 AGATTTTTACTGGTCGAACCGT 58.001 40.909 2.28 2.28 42.58 4.83
502 570 7.359262 TGACCTCACATTAAAAGAATACACG 57.641 36.000 0.00 0.00 0.00 4.49
554 622 3.583086 ACAGTGTCATTAGCCTAGTTGGT 59.417 43.478 0.00 0.00 38.35 3.67
560 628 6.598064 GTGTCATTAGCCTAGTTGGTTATTGT 59.402 38.462 8.42 0.00 35.64 2.71
562 630 6.038271 GTCATTAGCCTAGTTGGTTATTGTGG 59.962 42.308 8.42 0.00 35.64 4.17
563 631 5.508280 TTAGCCTAGTTGGTTATTGTGGT 57.492 39.130 0.00 0.00 38.35 4.16
569 637 6.349860 GCCTAGTTGGTTATTGTGGTTTTAGG 60.350 42.308 0.00 0.00 38.35 2.69
583 651 4.263905 TGGTTTTAGGATGTCTTGCCTCAT 60.264 41.667 0.00 0.00 35.73 2.90
585 653 3.565764 TTAGGATGTCTTGCCTCATGG 57.434 47.619 0.00 0.00 35.73 3.66
586 654 0.549950 AGGATGTCTTGCCTCATGGG 59.450 55.000 0.00 0.00 38.36 4.00
592 660 0.911769 TCTTGCCTCATGGGTAGGTG 59.088 55.000 0.00 0.00 36.43 4.00
595 663 1.072266 TGCCTCATGGGTAGGTGTTT 58.928 50.000 0.00 0.00 36.43 2.83
601 669 4.324563 CCTCATGGGTAGGTGTTTGATTCT 60.325 45.833 0.00 0.00 0.00 2.40
607 675 6.366340 TGGGTAGGTGTTTGATTCTTTGTTA 58.634 36.000 0.00 0.00 0.00 2.41
616 684 9.934190 GTGTTTGATTCTTTGTTAATGCAATTT 57.066 25.926 0.00 0.00 37.87 1.82
709 777 3.120796 GGTTTTTCCGGTTGGACCT 57.879 52.632 0.00 0.00 46.45 3.85
722 790 3.289525 GACCTCCAGTCCAGTCCG 58.710 66.667 0.00 0.00 39.84 4.79
737 805 6.429078 AGTCCAGTCCGGTTTTTAAAACTATC 59.571 38.462 18.31 8.37 35.57 2.08
747 815 8.512138 CGGTTTTTAAAACTATCCTCACAAGAT 58.488 33.333 18.31 0.00 0.00 2.40
795 865 2.352034 TCGCAAGACATCTAGACGAGTC 59.648 50.000 11.81 11.81 45.01 3.36
976 1061 2.033602 TCTCCTCCGTCTCGCACA 59.966 61.111 0.00 0.00 0.00 4.57
1211 1355 1.608717 CTCTCCCACCTCAAGTCCCG 61.609 65.000 0.00 0.00 0.00 5.14
1820 1968 1.474077 GGTGGGCATTGCTGTTTCTAG 59.526 52.381 8.82 0.00 0.00 2.43
1828 1976 1.289160 TGCTGTTTCTAGGGCTCCAT 58.711 50.000 0.00 0.00 0.00 3.41
1838 1986 1.377202 GGGCTCCATCGTTGCTGAA 60.377 57.895 0.00 0.00 0.00 3.02
1846 1994 0.108615 ATCGTTGCTGAAGAGGTCCG 60.109 55.000 0.00 0.00 0.00 4.79
1851 1999 1.251527 TGCTGAAGAGGTCCGAGGAC 61.252 60.000 13.61 13.61 43.87 3.85
1893 2041 1.381872 CCTCATCTCCGAGGTGGGT 60.382 63.158 7.78 0.00 46.48 4.51
1924 2072 0.392706 ATACATTGCTCATCGGCCGA 59.607 50.000 33.12 33.12 0.00 5.54
1945 2093 0.761187 ACTGCTCACTTTCAGCCTGA 59.239 50.000 0.00 0.00 35.89 3.86
1960 2108 1.144936 CTGAAGGGCCGGCTAAGAG 59.855 63.158 28.56 12.24 0.00 2.85
2028 2176 5.467705 AGTCGCAATCGGGATTACTATTAC 58.532 41.667 0.00 0.00 36.36 1.89
2037 2185 5.045215 CGGGATTACTATTACGCAGTCAAA 58.955 41.667 0.00 0.00 43.93 2.69
2038 2186 5.521010 CGGGATTACTATTACGCAGTCAAAA 59.479 40.000 0.00 0.00 43.93 2.44
2040 2188 7.254658 CGGGATTACTATTACGCAGTCAAAATT 60.255 37.037 0.00 0.00 43.93 1.82
2045 2193 4.609691 ATTACGCAGTCAAAATTACCGG 57.390 40.909 0.00 0.00 43.93 5.28
2051 2199 3.681593 CAGTCAAAATTACCGGGAAGGA 58.318 45.455 4.81 0.00 45.00 3.36
2056 2204 5.867174 GTCAAAATTACCGGGAAGGAATTTG 59.133 40.000 17.32 17.32 45.00 2.32
2109 2257 1.676014 GCACCACACCTCGCTAAAGAT 60.676 52.381 0.00 0.00 0.00 2.40
2110 2258 2.699954 CACCACACCTCGCTAAAGATT 58.300 47.619 0.00 0.00 0.00 2.40
2111 2259 3.857052 CACCACACCTCGCTAAAGATTA 58.143 45.455 0.00 0.00 0.00 1.75
2112 2260 4.442706 CACCACACCTCGCTAAAGATTAT 58.557 43.478 0.00 0.00 0.00 1.28
2113 2261 4.271049 CACCACACCTCGCTAAAGATTATG 59.729 45.833 0.00 0.00 0.00 1.90
2114 2262 3.248602 CCACACCTCGCTAAAGATTATGC 59.751 47.826 0.00 0.00 0.00 3.14
2119 2267 2.584166 CGCTAAAGATTATGCGGCAG 57.416 50.000 9.25 0.00 43.97 4.85
2120 2268 1.398960 CGCTAAAGATTATGCGGCAGC 60.399 52.381 9.25 0.31 43.97 5.25
2121 2269 1.068954 GCTAAAGATTATGCGGCAGCC 60.069 52.381 9.25 0.00 44.33 4.85
2122 2270 2.498167 CTAAAGATTATGCGGCAGCCT 58.502 47.619 10.54 0.00 44.33 4.58
2123 2271 1.027357 AAAGATTATGCGGCAGCCTG 58.973 50.000 10.54 4.27 44.33 4.85
2124 2272 1.450531 AAGATTATGCGGCAGCCTGC 61.451 55.000 18.13 18.13 44.33 4.85
2134 2282 3.715854 GCAGCCTGCAAAGATGAAG 57.284 52.632 12.82 0.00 44.26 3.02
2135 2283 0.886563 GCAGCCTGCAAAGATGAAGT 59.113 50.000 12.82 0.00 44.26 3.01
2136 2284 1.402456 GCAGCCTGCAAAGATGAAGTG 60.402 52.381 12.82 0.00 44.26 3.16
2137 2285 0.886563 AGCCTGCAAAGATGAAGTGC 59.113 50.000 0.00 0.00 38.78 4.40
2138 2286 0.108945 GCCTGCAAAGATGAAGTGCC 60.109 55.000 0.00 0.00 37.48 5.01
2139 2287 0.169672 CCTGCAAAGATGAAGTGCCG 59.830 55.000 0.00 0.00 37.48 5.69
2140 2288 1.159285 CTGCAAAGATGAAGTGCCGA 58.841 50.000 0.00 0.00 37.48 5.54
2141 2289 0.874390 TGCAAAGATGAAGTGCCGAC 59.126 50.000 0.00 0.00 37.48 4.79
2142 2290 1.160137 GCAAAGATGAAGTGCCGACT 58.840 50.000 0.00 0.00 31.94 4.18
2143 2291 2.289382 TGCAAAGATGAAGTGCCGACTA 60.289 45.455 0.00 0.00 37.48 2.59
2144 2292 2.349886 GCAAAGATGAAGTGCCGACTAG 59.650 50.000 0.00 0.00 31.94 2.57
2145 2293 3.849911 CAAAGATGAAGTGCCGACTAGA 58.150 45.455 0.00 0.00 0.00 2.43
2146 2294 4.437239 CAAAGATGAAGTGCCGACTAGAT 58.563 43.478 0.00 0.00 0.00 1.98
2147 2295 4.744795 AAGATGAAGTGCCGACTAGATT 57.255 40.909 0.00 0.00 0.00 2.40
2148 2296 4.314740 AGATGAAGTGCCGACTAGATTC 57.685 45.455 0.00 0.00 0.00 2.52
2149 2297 3.701542 AGATGAAGTGCCGACTAGATTCA 59.298 43.478 0.00 0.00 0.00 2.57
2150 2298 3.510388 TGAAGTGCCGACTAGATTCAG 57.490 47.619 0.00 0.00 0.00 3.02
2151 2299 3.089284 TGAAGTGCCGACTAGATTCAGA 58.911 45.455 0.00 0.00 0.00 3.27
2152 2300 3.701542 TGAAGTGCCGACTAGATTCAGAT 59.298 43.478 0.00 0.00 0.00 2.90
2153 2301 4.160439 TGAAGTGCCGACTAGATTCAGATT 59.840 41.667 0.00 0.00 0.00 2.40
2154 2302 4.744795 AGTGCCGACTAGATTCAGATTT 57.255 40.909 0.00 0.00 0.00 2.17
2155 2303 5.854010 AGTGCCGACTAGATTCAGATTTA 57.146 39.130 0.00 0.00 0.00 1.40
2156 2304 5.593010 AGTGCCGACTAGATTCAGATTTAC 58.407 41.667 0.00 0.00 0.00 2.01
2157 2305 5.127194 AGTGCCGACTAGATTCAGATTTACA 59.873 40.000 0.00 0.00 0.00 2.41
2158 2306 5.986135 GTGCCGACTAGATTCAGATTTACAT 59.014 40.000 0.00 0.00 0.00 2.29
2159 2307 5.985530 TGCCGACTAGATTCAGATTTACATG 59.014 40.000 0.00 0.00 0.00 3.21
2160 2308 6.183360 TGCCGACTAGATTCAGATTTACATGA 60.183 38.462 0.00 0.00 0.00 3.07
2161 2309 6.701841 GCCGACTAGATTCAGATTTACATGAA 59.298 38.462 0.00 0.00 39.59 2.57
2162 2310 7.306866 GCCGACTAGATTCAGATTTACATGAAC 60.307 40.741 0.00 0.00 38.19 3.18
2163 2311 7.169982 CCGACTAGATTCAGATTTACATGAACC 59.830 40.741 0.00 0.00 38.19 3.62
2164 2312 7.706607 CGACTAGATTCAGATTTACATGAACCA 59.293 37.037 0.00 0.00 38.19 3.67
2165 2313 9.383519 GACTAGATTCAGATTTACATGAACCAA 57.616 33.333 0.00 0.00 38.19 3.67
2166 2314 9.388506 ACTAGATTCAGATTTACATGAACCAAG 57.611 33.333 0.00 0.00 38.19 3.61
2167 2315 9.605275 CTAGATTCAGATTTACATGAACCAAGA 57.395 33.333 0.00 0.00 38.19 3.02
2168 2316 8.273780 AGATTCAGATTTACATGAACCAAGAC 57.726 34.615 0.00 0.00 38.19 3.01
2169 2317 8.105829 AGATTCAGATTTACATGAACCAAGACT 58.894 33.333 0.00 0.00 38.19 3.24
2170 2318 7.439157 TTCAGATTTACATGAACCAAGACTG 57.561 36.000 0.00 0.00 30.67 3.51
2184 2332 5.972107 CCAAGACTGGTCTGAAAATTCAT 57.028 39.130 3.88 0.00 40.36 2.57
2186 2334 7.452880 CCAAGACTGGTCTGAAAATTCATAA 57.547 36.000 3.88 0.00 40.36 1.90
2187 2335 7.308435 CCAAGACTGGTCTGAAAATTCATAAC 58.692 38.462 3.88 0.00 40.36 1.89
2188 2336 7.175641 CCAAGACTGGTCTGAAAATTCATAACT 59.824 37.037 3.88 0.00 40.36 2.24
2189 2337 7.678947 AGACTGGTCTGAAAATTCATAACTG 57.321 36.000 2.15 0.00 38.75 3.16
2190 2338 6.150140 AGACTGGTCTGAAAATTCATAACTGC 59.850 38.462 2.15 0.00 38.75 4.40
2191 2339 5.769662 ACTGGTCTGAAAATTCATAACTGCA 59.230 36.000 0.00 0.00 36.46 4.41
2192 2340 6.435277 ACTGGTCTGAAAATTCATAACTGCAT 59.565 34.615 0.00 0.00 36.46 3.96
2193 2341 7.611467 ACTGGTCTGAAAATTCATAACTGCATA 59.389 33.333 0.00 0.00 36.46 3.14
2194 2342 8.523915 TGGTCTGAAAATTCATAACTGCATAT 57.476 30.769 0.00 0.00 36.46 1.78
2195 2343 8.407832 TGGTCTGAAAATTCATAACTGCATATG 58.592 33.333 0.00 0.00 36.46 1.78
2196 2344 7.864379 GGTCTGAAAATTCATAACTGCATATGG 59.136 37.037 4.56 0.00 36.46 2.74
2197 2345 7.380602 GTCTGAAAATTCATAACTGCATATGGC 59.619 37.037 4.56 0.00 38.78 4.40
2198 2346 7.068470 TCTGAAAATTCATAACTGCATATGGCA 59.932 33.333 4.56 2.42 43.08 4.92
2199 2347 6.979817 TGAAAATTCATAACTGCATATGGCAC 59.020 34.615 4.56 0.00 38.98 5.01
2200 2348 7.363617 TGAAAATTCATAACTGCATATGGCACA 60.364 33.333 4.56 0.00 38.98 4.57
2215 2363 4.305989 TGGCACAACAAAATCTTCACTC 57.694 40.909 0.00 0.00 31.92 3.51
2216 2364 3.068024 TGGCACAACAAAATCTTCACTCC 59.932 43.478 0.00 0.00 31.92 3.85
2217 2365 3.319122 GGCACAACAAAATCTTCACTCCT 59.681 43.478 0.00 0.00 0.00 3.69
2218 2366 4.540824 GCACAACAAAATCTTCACTCCTC 58.459 43.478 0.00 0.00 0.00 3.71
2219 2367 4.776743 CACAACAAAATCTTCACTCCTCG 58.223 43.478 0.00 0.00 0.00 4.63
2220 2368 4.273480 CACAACAAAATCTTCACTCCTCGT 59.727 41.667 0.00 0.00 0.00 4.18
2221 2369 5.465390 CACAACAAAATCTTCACTCCTCGTA 59.535 40.000 0.00 0.00 0.00 3.43
2222 2370 6.147821 CACAACAAAATCTTCACTCCTCGTAT 59.852 38.462 0.00 0.00 0.00 3.06
2223 2371 6.369065 ACAACAAAATCTTCACTCCTCGTATC 59.631 38.462 0.00 0.00 0.00 2.24
2224 2372 6.037786 ACAAAATCTTCACTCCTCGTATCA 57.962 37.500 0.00 0.00 0.00 2.15
2225 2373 6.644347 ACAAAATCTTCACTCCTCGTATCAT 58.356 36.000 0.00 0.00 0.00 2.45
2226 2374 6.536582 ACAAAATCTTCACTCCTCGTATCATG 59.463 38.462 0.00 0.00 0.00 3.07
2227 2375 3.717400 TCTTCACTCCTCGTATCATGC 57.283 47.619 0.00 0.00 0.00 4.06
2228 2376 3.291584 TCTTCACTCCTCGTATCATGCT 58.708 45.455 0.00 0.00 0.00 3.79
2229 2377 4.461198 TCTTCACTCCTCGTATCATGCTA 58.539 43.478 0.00 0.00 0.00 3.49
2230 2378 5.073428 TCTTCACTCCTCGTATCATGCTAT 58.927 41.667 0.00 0.00 0.00 2.97
2231 2379 5.536538 TCTTCACTCCTCGTATCATGCTATT 59.463 40.000 0.00 0.00 0.00 1.73
2232 2380 5.378292 TCACTCCTCGTATCATGCTATTC 57.622 43.478 0.00 0.00 0.00 1.75
2233 2381 4.827284 TCACTCCTCGTATCATGCTATTCA 59.173 41.667 0.00 0.00 0.00 2.57
2234 2382 5.478332 TCACTCCTCGTATCATGCTATTCAT 59.522 40.000 0.00 0.00 35.31 2.57
2235 2383 6.015095 TCACTCCTCGTATCATGCTATTCATT 60.015 38.462 0.00 0.00 31.79 2.57
2236 2384 6.309980 CACTCCTCGTATCATGCTATTCATTC 59.690 42.308 0.00 0.00 31.79 2.67
2237 2385 5.724328 TCCTCGTATCATGCTATTCATTCC 58.276 41.667 0.00 0.00 31.79 3.01
2238 2386 5.481824 TCCTCGTATCATGCTATTCATTCCT 59.518 40.000 0.00 0.00 31.79 3.36
2239 2387 5.579904 CCTCGTATCATGCTATTCATTCCTG 59.420 44.000 0.00 0.00 31.79 3.86
2240 2388 6.345096 TCGTATCATGCTATTCATTCCTGA 57.655 37.500 0.00 0.00 31.79 3.86
2241 2389 6.939622 TCGTATCATGCTATTCATTCCTGAT 58.060 36.000 0.00 0.00 31.79 2.90
2242 2390 7.389232 TCGTATCATGCTATTCATTCCTGATT 58.611 34.615 0.00 0.00 31.79 2.57
2243 2391 7.879677 TCGTATCATGCTATTCATTCCTGATTT 59.120 33.333 0.00 0.00 31.79 2.17
2244 2392 9.154847 CGTATCATGCTATTCATTCCTGATTTA 57.845 33.333 0.00 0.00 31.79 1.40
2247 2395 8.387190 TCATGCTATTCATTCCTGATTTAGTG 57.613 34.615 0.00 0.00 31.79 2.74
2248 2396 7.994911 TCATGCTATTCATTCCTGATTTAGTGT 59.005 33.333 0.00 0.00 31.79 3.55
2249 2397 8.627403 CATGCTATTCATTCCTGATTTAGTGTT 58.373 33.333 0.00 0.00 31.79 3.32
2250 2398 7.988737 TGCTATTCATTCCTGATTTAGTGTTG 58.011 34.615 0.00 0.00 0.00 3.33
2251 2399 7.611467 TGCTATTCATTCCTGATTTAGTGTTGT 59.389 33.333 0.00 0.00 0.00 3.32
2252 2400 8.462016 GCTATTCATTCCTGATTTAGTGTTGTT 58.538 33.333 0.00 0.00 0.00 2.83
2253 2401 9.778993 CTATTCATTCCTGATTTAGTGTTGTTG 57.221 33.333 0.00 0.00 0.00 3.33
2254 2402 6.573664 TCATTCCTGATTTAGTGTTGTTGG 57.426 37.500 0.00 0.00 0.00 3.77
2255 2403 4.846779 TTCCTGATTTAGTGTTGTTGGC 57.153 40.909 0.00 0.00 0.00 4.52
2256 2404 3.153919 TCCTGATTTAGTGTTGTTGGCC 58.846 45.455 0.00 0.00 0.00 5.36
2257 2405 3.157087 CCTGATTTAGTGTTGTTGGCCT 58.843 45.455 3.32 0.00 0.00 5.19
2258 2406 4.042311 TCCTGATTTAGTGTTGTTGGCCTA 59.958 41.667 3.32 0.00 0.00 3.93
2259 2407 4.764823 CCTGATTTAGTGTTGTTGGCCTAA 59.235 41.667 3.32 0.00 0.00 2.69
2260 2408 5.335661 CCTGATTTAGTGTTGTTGGCCTAAC 60.336 44.000 3.32 7.72 39.80 2.34
2261 2409 5.381757 TGATTTAGTGTTGTTGGCCTAACT 58.618 37.500 3.32 0.00 40.05 2.24
2262 2410 5.240623 TGATTTAGTGTTGTTGGCCTAACTG 59.759 40.000 3.32 0.00 40.05 3.16
2263 2411 4.425180 TTAGTGTTGTTGGCCTAACTGA 57.575 40.909 3.32 0.00 40.05 3.41
2264 2412 3.290948 AGTGTTGTTGGCCTAACTGAA 57.709 42.857 3.32 0.00 40.05 3.02
2265 2413 3.832527 AGTGTTGTTGGCCTAACTGAAT 58.167 40.909 3.32 0.00 40.05 2.57
2266 2414 3.569701 AGTGTTGTTGGCCTAACTGAATG 59.430 43.478 3.32 0.00 40.05 2.67
2267 2415 2.890311 TGTTGTTGGCCTAACTGAATGG 59.110 45.455 3.32 0.00 40.05 3.16
2268 2416 2.890945 GTTGTTGGCCTAACTGAATGGT 59.109 45.455 3.32 0.00 40.05 3.55
2269 2417 4.076394 GTTGTTGGCCTAACTGAATGGTA 58.924 43.478 3.32 0.00 40.05 3.25
2270 2418 3.950397 TGTTGGCCTAACTGAATGGTAG 58.050 45.455 3.32 0.00 40.05 3.18
2271 2419 3.329520 TGTTGGCCTAACTGAATGGTAGT 59.670 43.478 3.32 0.00 40.05 2.73
2272 2420 4.202524 TGTTGGCCTAACTGAATGGTAGTT 60.203 41.667 3.32 0.00 41.06 2.24
2273 2421 3.950397 TGGCCTAACTGAATGGTAGTTG 58.050 45.455 3.32 0.00 38.70 3.16
2274 2422 3.279434 GGCCTAACTGAATGGTAGTTGG 58.721 50.000 0.00 0.00 38.70 3.77
2275 2423 2.683362 GCCTAACTGAATGGTAGTTGGC 59.317 50.000 12.18 12.18 40.98 4.52
2276 2424 3.622455 GCCTAACTGAATGGTAGTTGGCT 60.622 47.826 16.67 0.00 42.46 4.75
2277 2425 3.941483 CCTAACTGAATGGTAGTTGGCTG 59.059 47.826 0.00 0.00 38.70 4.85
2278 2426 1.826385 ACTGAATGGTAGTTGGCTGC 58.174 50.000 0.00 0.00 0.00 5.25
2279 2427 1.352352 ACTGAATGGTAGTTGGCTGCT 59.648 47.619 0.00 0.00 0.00 4.24
2280 2428 2.571653 ACTGAATGGTAGTTGGCTGCTA 59.428 45.455 0.00 0.00 0.00 3.49
2281 2429 3.200825 ACTGAATGGTAGTTGGCTGCTAT 59.799 43.478 0.00 0.00 30.57 2.97
2282 2430 3.808728 TGAATGGTAGTTGGCTGCTATC 58.191 45.455 0.00 0.00 29.24 2.08
2283 2431 3.455910 TGAATGGTAGTTGGCTGCTATCT 59.544 43.478 0.00 0.14 29.24 1.98
2284 2432 4.653801 TGAATGGTAGTTGGCTGCTATCTA 59.346 41.667 0.00 0.00 29.24 1.98
2285 2433 5.307976 TGAATGGTAGTTGGCTGCTATCTAT 59.692 40.000 7.01 0.00 29.24 1.98
2286 2434 5.832539 ATGGTAGTTGGCTGCTATCTATT 57.167 39.130 7.01 0.00 0.00 1.73
2287 2435 6.935240 ATGGTAGTTGGCTGCTATCTATTA 57.065 37.500 7.01 1.46 0.00 0.98
2288 2436 6.935240 TGGTAGTTGGCTGCTATCTATTAT 57.065 37.500 7.01 0.00 0.00 1.28
2289 2437 7.316393 TGGTAGTTGGCTGCTATCTATTATT 57.684 36.000 7.01 0.00 0.00 1.40
2290 2438 7.745717 TGGTAGTTGGCTGCTATCTATTATTT 58.254 34.615 7.01 0.00 0.00 1.40
2291 2439 8.876181 TGGTAGTTGGCTGCTATCTATTATTTA 58.124 33.333 7.01 0.00 0.00 1.40
2292 2440 9.892130 GGTAGTTGGCTGCTATCTATTATTTAT 57.108 33.333 7.01 0.00 0.00 1.40
2314 2462 6.985653 ATAGTATGTCTGTATGCTGAGGTT 57.014 37.500 0.00 0.00 0.00 3.50
2328 2476 1.068895 TGAGGTTGCCATTGCTGTTTG 59.931 47.619 0.00 0.00 38.71 2.93
2351 2499 0.323725 GTCCCCAATGGTGCTGTCAT 60.324 55.000 0.00 0.00 34.77 3.06
2352 2500 0.409092 TCCCCAATGGTGCTGTCATT 59.591 50.000 0.00 0.00 35.45 2.57
2374 2522 0.177604 CTAAGGACCTGCTGCAGAGG 59.822 60.000 30.10 22.06 32.44 3.69
2380 2528 1.123861 ACCTGCTGCAGAGGAAGTCA 61.124 55.000 30.10 12.06 34.37 3.41
2408 2556 1.203300 TGATCTCTGAGGTGGGGTTGA 60.203 52.381 4.59 0.00 0.00 3.18
2422 2570 2.629639 GGTTGAAACCGGCATACTTG 57.370 50.000 0.00 0.00 39.66 3.16
2432 2580 2.780595 GCATACTTGGCACATCGGT 58.219 52.632 0.00 0.00 39.30 4.69
2442 2590 1.715585 CACATCGGTCGACATTGCC 59.284 57.895 18.91 0.00 0.00 4.52
2450 2598 0.719465 GTCGACATTGCCCACTTACG 59.281 55.000 11.55 0.00 0.00 3.18
2486 2634 2.994186 AATGCCCCGATACTACGTTT 57.006 45.000 0.00 0.00 0.00 3.60
2526 2674 8.054572 TGAAAATGGATTCATAGATCAAGACCA 58.945 33.333 0.00 0.00 34.50 4.02
2702 2858 9.959721 ATACTGATATGAAAATGGGTATGTACC 57.040 33.333 0.40 0.40 45.71 3.34
2863 3072 5.689383 TCTTTGTGTTCTGAAATGGCTAC 57.311 39.130 0.00 0.00 0.00 3.58
2872 3081 4.905429 TCTGAAATGGCTACTGCAGTTTA 58.095 39.130 27.06 6.95 41.91 2.01
2873 3082 5.500234 TCTGAAATGGCTACTGCAGTTTAT 58.500 37.500 27.06 11.43 41.91 1.40
2875 3084 6.763135 TCTGAAATGGCTACTGCAGTTTATAG 59.237 38.462 27.06 17.22 41.91 1.31
2922 3153 5.540911 TGAAAGAATGTTCTCATTTTGCCC 58.459 37.500 0.00 0.00 43.33 5.36
2923 3154 5.070180 TGAAAGAATGTTCTCATTTTGCCCA 59.930 36.000 0.00 0.00 43.33 5.36
2924 3155 4.525912 AGAATGTTCTCATTTTGCCCAC 57.474 40.909 0.00 0.00 43.33 4.61
2928 3159 2.890311 TGTTCTCATTTTGCCCACGAAT 59.110 40.909 0.00 0.00 0.00 3.34
3055 3287 2.508300 TGGGTGATACTTTTCTAGGGGC 59.492 50.000 0.00 0.00 0.00 5.80
3066 3298 3.334910 TTCTAGGGGCATCTGATCTCA 57.665 47.619 0.00 0.00 0.00 3.27
3073 3305 2.686915 GGGCATCTGATCTCAAAACTGG 59.313 50.000 0.00 0.00 0.00 4.00
3088 3320 9.085645 TCTCAAAACTGGATAGTTGAGTAGTAA 57.914 33.333 10.97 0.00 46.14 2.24
3102 3334 8.468399 AGTTGAGTAGTAAGCTAGTACCATTTC 58.532 37.037 0.00 0.00 35.63 2.17
3105 3337 7.068348 TGAGTAGTAAGCTAGTACCATTTCTGG 59.932 40.741 0.00 0.00 38.46 3.86
3123 3355 5.499004 TCTGGTGAAAGCCTACTTGTATT 57.501 39.130 0.00 0.00 35.85 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.012561 AGTGCTAAAGGAGTCATTCAGAAGT 59.987 40.000 0.00 0.00 0.00 3.01
3 4 5.247110 AGAGTGCTAAAGGAGTCATTCAGAA 59.753 40.000 8.75 0.00 38.16 3.02
4 5 4.774726 AGAGTGCTAAAGGAGTCATTCAGA 59.225 41.667 8.75 0.00 38.16 3.27
5 6 5.083533 AGAGTGCTAAAGGAGTCATTCAG 57.916 43.478 8.75 0.00 38.16 3.02
6 7 5.489792 AAGAGTGCTAAAGGAGTCATTCA 57.510 39.130 8.75 0.00 38.16 2.57
7 8 6.809630 AAAAGAGTGCTAAAGGAGTCATTC 57.190 37.500 8.75 0.00 38.16 2.67
45 46 9.676861 GGTATGGTAAAGGTAAACTGTTTCTAT 57.323 33.333 9.38 0.17 0.00 1.98
46 47 8.883302 AGGTATGGTAAAGGTAAACTGTTTCTA 58.117 33.333 9.38 0.00 0.00 2.10
47 48 7.752638 AGGTATGGTAAAGGTAAACTGTTTCT 58.247 34.615 9.38 0.00 0.00 2.52
48 49 7.991084 AGGTATGGTAAAGGTAAACTGTTTC 57.009 36.000 9.38 2.01 0.00 2.78
49 50 7.449395 GGAAGGTATGGTAAAGGTAAACTGTTT 59.551 37.037 10.98 10.98 0.00 2.83
50 51 6.944290 GGAAGGTATGGTAAAGGTAAACTGTT 59.056 38.462 0.00 0.00 0.00 3.16
51 52 6.044637 TGGAAGGTATGGTAAAGGTAAACTGT 59.955 38.462 0.00 0.00 0.00 3.55
52 53 6.478129 TGGAAGGTATGGTAAAGGTAAACTG 58.522 40.000 0.00 0.00 0.00 3.16
53 54 6.707273 TGGAAGGTATGGTAAAGGTAAACT 57.293 37.500 0.00 0.00 0.00 2.66
54 55 6.127814 GCTTGGAAGGTATGGTAAAGGTAAAC 60.128 42.308 0.00 0.00 0.00 2.01
55 56 5.947566 GCTTGGAAGGTATGGTAAAGGTAAA 59.052 40.000 0.00 0.00 0.00 2.01
56 57 5.014333 TGCTTGGAAGGTATGGTAAAGGTAA 59.986 40.000 0.00 0.00 0.00 2.85
57 58 4.536888 TGCTTGGAAGGTATGGTAAAGGTA 59.463 41.667 0.00 0.00 0.00 3.08
58 59 3.332485 TGCTTGGAAGGTATGGTAAAGGT 59.668 43.478 0.00 0.00 0.00 3.50
59 60 3.963129 TGCTTGGAAGGTATGGTAAAGG 58.037 45.455 0.00 0.00 0.00 3.11
60 61 5.253330 TCTTGCTTGGAAGGTATGGTAAAG 58.747 41.667 2.24 0.00 0.00 1.85
61 62 5.222048 ACTCTTGCTTGGAAGGTATGGTAAA 60.222 40.000 2.24 0.00 0.00 2.01
62 63 4.288626 ACTCTTGCTTGGAAGGTATGGTAA 59.711 41.667 2.24 0.00 0.00 2.85
63 64 3.844211 ACTCTTGCTTGGAAGGTATGGTA 59.156 43.478 2.24 0.00 0.00 3.25
64 65 2.644798 ACTCTTGCTTGGAAGGTATGGT 59.355 45.455 2.24 0.00 0.00 3.55
65 66 3.012518 CACTCTTGCTTGGAAGGTATGG 58.987 50.000 2.24 0.00 0.00 2.74
66 67 3.679389 ACACTCTTGCTTGGAAGGTATG 58.321 45.455 2.24 1.97 0.00 2.39
67 68 4.373156 AACACTCTTGCTTGGAAGGTAT 57.627 40.909 2.24 0.00 0.00 2.73
68 69 3.857157 AACACTCTTGCTTGGAAGGTA 57.143 42.857 2.24 0.00 0.00 3.08
69 70 2.736670 AACACTCTTGCTTGGAAGGT 57.263 45.000 2.24 0.00 0.00 3.50
70 71 5.712152 ATAAAACACTCTTGCTTGGAAGG 57.288 39.130 2.24 0.00 0.00 3.46
71 72 5.403466 GCAATAAAACACTCTTGCTTGGAAG 59.597 40.000 0.00 0.00 40.55 3.46
72 73 5.163468 TGCAATAAAACACTCTTGCTTGGAA 60.163 36.000 7.52 0.00 43.33 3.53
73 74 4.340666 TGCAATAAAACACTCTTGCTTGGA 59.659 37.500 7.52 0.00 43.33 3.53
74 75 4.619973 TGCAATAAAACACTCTTGCTTGG 58.380 39.130 7.52 0.00 43.33 3.61
75 76 5.978919 TCTTGCAATAAAACACTCTTGCTTG 59.021 36.000 0.00 1.55 43.33 4.01
76 77 6.147864 TCTTGCAATAAAACACTCTTGCTT 57.852 33.333 0.00 0.00 43.33 3.91
77 78 5.772825 TCTTGCAATAAAACACTCTTGCT 57.227 34.783 0.00 0.00 43.33 3.91
78 79 8.519492 TTAATCTTGCAATAAAACACTCTTGC 57.481 30.769 0.00 0.00 43.25 4.01
79 80 9.683069 ACTTAATCTTGCAATAAAACACTCTTG 57.317 29.630 0.00 0.00 0.00 3.02
89 90 9.733556 TCTGGAAGTAACTTAATCTTGCAATAA 57.266 29.630 0.00 0.00 38.57 1.40
90 91 9.383519 CTCTGGAAGTAACTTAATCTTGCAATA 57.616 33.333 0.00 0.00 38.57 1.90
91 92 8.103305 TCTCTGGAAGTAACTTAATCTTGCAAT 58.897 33.333 0.00 0.00 38.57 3.56
92 93 7.450074 TCTCTGGAAGTAACTTAATCTTGCAA 58.550 34.615 0.00 0.00 38.57 4.08
93 94 7.004555 TCTCTGGAAGTAACTTAATCTTGCA 57.995 36.000 0.00 0.00 37.24 4.08
94 95 7.043059 CGATCTCTGGAAGTAACTTAATCTTGC 60.043 40.741 0.00 0.00 33.76 4.01
95 96 7.436673 CCGATCTCTGGAAGTAACTTAATCTTG 59.563 40.741 0.00 0.00 33.76 3.02
96 97 7.342284 TCCGATCTCTGGAAGTAACTTAATCTT 59.658 37.037 0.00 0.00 33.76 2.40
97 98 6.834451 TCCGATCTCTGGAAGTAACTTAATCT 59.166 38.462 0.00 0.00 33.76 2.40
98 99 7.040473 TCCGATCTCTGGAAGTAACTTAATC 57.960 40.000 0.00 0.00 33.76 1.75
99 100 6.461788 GCTCCGATCTCTGGAAGTAACTTAAT 60.462 42.308 0.00 0.00 34.44 1.40
100 101 5.163540 GCTCCGATCTCTGGAAGTAACTTAA 60.164 44.000 0.00 0.00 34.44 1.85
101 102 4.338682 GCTCCGATCTCTGGAAGTAACTTA 59.661 45.833 0.00 0.00 34.44 2.24
102 103 3.131400 GCTCCGATCTCTGGAAGTAACTT 59.869 47.826 0.00 0.00 34.44 2.66
103 104 2.691011 GCTCCGATCTCTGGAAGTAACT 59.309 50.000 0.00 0.00 34.44 2.24
104 105 2.223852 GGCTCCGATCTCTGGAAGTAAC 60.224 54.545 0.00 0.00 34.44 2.50
105 106 2.032620 GGCTCCGATCTCTGGAAGTAA 58.967 52.381 0.00 0.00 34.44 2.24
106 107 1.063942 TGGCTCCGATCTCTGGAAGTA 60.064 52.381 0.00 0.00 34.44 2.24
107 108 0.324738 TGGCTCCGATCTCTGGAAGT 60.325 55.000 0.00 0.00 34.44 3.01
108 109 0.388659 CTGGCTCCGATCTCTGGAAG 59.611 60.000 0.00 0.00 34.44 3.46
109 110 0.033109 TCTGGCTCCGATCTCTGGAA 60.033 55.000 0.00 0.00 34.44 3.53
110 111 0.753479 GTCTGGCTCCGATCTCTGGA 60.753 60.000 0.00 0.00 0.00 3.86
111 112 1.039785 TGTCTGGCTCCGATCTCTGG 61.040 60.000 0.00 0.00 0.00 3.86
112 113 0.820226 TTGTCTGGCTCCGATCTCTG 59.180 55.000 0.00 0.00 0.00 3.35
113 114 1.480137 CTTTGTCTGGCTCCGATCTCT 59.520 52.381 0.00 0.00 0.00 3.10
114 115 1.478510 TCTTTGTCTGGCTCCGATCTC 59.521 52.381 0.00 0.00 0.00 2.75
115 116 1.561643 TCTTTGTCTGGCTCCGATCT 58.438 50.000 0.00 0.00 0.00 2.75
116 117 2.611225 ATCTTTGTCTGGCTCCGATC 57.389 50.000 0.00 0.00 0.00 3.69
117 118 3.706594 TCTTATCTTTGTCTGGCTCCGAT 59.293 43.478 0.00 0.00 0.00 4.18
118 119 3.096852 TCTTATCTTTGTCTGGCTCCGA 58.903 45.455 0.00 0.00 0.00 4.55
119 120 3.118956 AGTCTTATCTTTGTCTGGCTCCG 60.119 47.826 0.00 0.00 0.00 4.63
120 121 4.438148 GAGTCTTATCTTTGTCTGGCTCC 58.562 47.826 0.00 0.00 0.00 4.70
121 122 4.081420 TGGAGTCTTATCTTTGTCTGGCTC 60.081 45.833 0.00 0.00 0.00 4.70
122 123 3.840666 TGGAGTCTTATCTTTGTCTGGCT 59.159 43.478 0.00 0.00 0.00 4.75
123 124 3.935828 GTGGAGTCTTATCTTTGTCTGGC 59.064 47.826 0.00 0.00 0.00 4.85
124 125 4.177026 CGTGGAGTCTTATCTTTGTCTGG 58.823 47.826 0.00 0.00 0.00 3.86
125 126 4.177026 CCGTGGAGTCTTATCTTTGTCTG 58.823 47.826 0.00 0.00 0.00 3.51
126 127 3.368531 GCCGTGGAGTCTTATCTTTGTCT 60.369 47.826 0.00 0.00 0.00 3.41
127 128 2.930682 GCCGTGGAGTCTTATCTTTGTC 59.069 50.000 0.00 0.00 0.00 3.18
128 129 2.674177 CGCCGTGGAGTCTTATCTTTGT 60.674 50.000 0.00 0.00 0.00 2.83
129 130 1.927174 CGCCGTGGAGTCTTATCTTTG 59.073 52.381 0.00 0.00 0.00 2.77
130 131 1.134788 CCGCCGTGGAGTCTTATCTTT 60.135 52.381 0.00 0.00 42.00 2.52
131 132 0.460311 CCGCCGTGGAGTCTTATCTT 59.540 55.000 0.00 0.00 42.00 2.40
132 133 2.017559 GCCGCCGTGGAGTCTTATCT 62.018 60.000 0.88 0.00 42.00 1.98
133 134 1.591863 GCCGCCGTGGAGTCTTATC 60.592 63.158 0.88 0.00 42.00 1.75
134 135 2.355986 TGCCGCCGTGGAGTCTTAT 61.356 57.895 0.88 0.00 42.00 1.73
135 136 2.992689 TGCCGCCGTGGAGTCTTA 60.993 61.111 0.88 0.00 42.00 2.10
136 137 4.681978 GTGCCGCCGTGGAGTCTT 62.682 66.667 0.88 0.00 42.00 3.01
148 149 1.570347 TTTTTGACCCGATCGTGCCG 61.570 55.000 15.09 0.00 0.00 5.69
149 150 0.808755 ATTTTTGACCCGATCGTGCC 59.191 50.000 15.09 0.00 0.00 5.01
150 151 1.466950 TCATTTTTGACCCGATCGTGC 59.533 47.619 15.09 3.28 0.00 5.34
151 152 2.742053 ACTCATTTTTGACCCGATCGTG 59.258 45.455 15.09 4.94 0.00 4.35
152 153 3.000727 GACTCATTTTTGACCCGATCGT 58.999 45.455 15.09 0.00 0.00 3.73
153 154 3.000041 TGACTCATTTTTGACCCGATCG 59.000 45.455 8.51 8.51 0.00 3.69
154 155 5.371115 TTTGACTCATTTTTGACCCGATC 57.629 39.130 0.00 0.00 0.00 3.69
155 156 5.782893 TTTTGACTCATTTTTGACCCGAT 57.217 34.783 0.00 0.00 0.00 4.18
156 157 5.126384 AGTTTTTGACTCATTTTTGACCCGA 59.874 36.000 0.00 0.00 31.20 5.14
157 158 5.348164 AGTTTTTGACTCATTTTTGACCCG 58.652 37.500 0.00 0.00 31.20 5.28
158 159 6.593770 ACAAGTTTTTGACTCATTTTTGACCC 59.406 34.615 0.00 0.00 37.72 4.46
159 160 7.595311 ACAAGTTTTTGACTCATTTTTGACC 57.405 32.000 0.00 0.00 37.72 4.02
165 166 8.941977 GGGTTTTTACAAGTTTTTGACTCATTT 58.058 29.630 0.00 0.00 37.72 2.32
166 167 7.276878 CGGGTTTTTACAAGTTTTTGACTCATT 59.723 33.333 0.00 0.00 37.72 2.57
167 168 6.754675 CGGGTTTTTACAAGTTTTTGACTCAT 59.245 34.615 0.00 0.00 37.72 2.90
168 169 6.094061 CGGGTTTTTACAAGTTTTTGACTCA 58.906 36.000 0.00 0.00 37.72 3.41
169 170 5.517411 CCGGGTTTTTACAAGTTTTTGACTC 59.483 40.000 0.00 0.00 37.72 3.36
170 171 5.047164 ACCGGGTTTTTACAAGTTTTTGACT 60.047 36.000 6.32 0.00 41.47 3.41
171 172 5.170021 ACCGGGTTTTTACAAGTTTTTGAC 58.830 37.500 6.32 0.00 37.73 3.18
172 173 5.402997 ACCGGGTTTTTACAAGTTTTTGA 57.597 34.783 6.32 0.00 37.73 2.69
173 174 6.483385 AAACCGGGTTTTTACAAGTTTTTG 57.517 33.333 19.22 0.00 34.88 2.44
174 175 6.072618 CCAAAACCGGGTTTTTACAAGTTTTT 60.073 34.615 30.15 7.13 42.11 1.94
175 176 5.411977 CCAAAACCGGGTTTTTACAAGTTTT 59.588 36.000 30.15 7.62 42.11 2.43
176 177 4.936411 CCAAAACCGGGTTTTTACAAGTTT 59.064 37.500 30.15 8.32 42.11 2.66
177 178 4.505808 CCAAAACCGGGTTTTTACAAGTT 58.494 39.130 30.15 9.01 42.11 2.66
178 179 3.679361 GCCAAAACCGGGTTTTTACAAGT 60.679 43.478 30.15 9.71 42.11 3.16
179 180 2.867368 GCCAAAACCGGGTTTTTACAAG 59.133 45.455 30.15 19.83 42.11 3.16
180 181 2.419713 GGCCAAAACCGGGTTTTTACAA 60.420 45.455 30.15 0.00 42.11 2.41
181 182 1.138464 GGCCAAAACCGGGTTTTTACA 59.862 47.619 30.15 0.00 42.11 2.41
182 183 1.413445 AGGCCAAAACCGGGTTTTTAC 59.587 47.619 30.15 24.05 42.11 2.01
183 184 1.790818 AGGCCAAAACCGGGTTTTTA 58.209 45.000 30.15 0.00 42.11 1.52
184 185 0.913205 AAGGCCAAAACCGGGTTTTT 59.087 45.000 30.15 16.40 42.11 1.94
185 186 0.179234 CAAGGCCAAAACCGGGTTTT 59.821 50.000 27.78 27.78 45.06 2.43
186 187 0.978667 ACAAGGCCAAAACCGGGTTT 60.979 50.000 19.22 19.22 37.34 3.27
187 188 0.978667 AACAAGGCCAAAACCGGGTT 60.979 50.000 6.59 6.59 33.69 4.11
188 189 0.106116 TAACAAGGCCAAAACCGGGT 60.106 50.000 6.32 0.00 33.69 5.28
189 190 0.315886 GTAACAAGGCCAAAACCGGG 59.684 55.000 6.32 0.00 33.69 5.73
190 191 1.324383 AGTAACAAGGCCAAAACCGG 58.676 50.000 5.01 0.00 33.69 5.28
191 192 4.776795 ATTAGTAACAAGGCCAAAACCG 57.223 40.909 5.01 0.00 33.69 4.44
192 193 7.713507 AGAAAAATTAGTAACAAGGCCAAAACC 59.286 33.333 5.01 0.00 0.00 3.27
193 194 8.657074 AGAAAAATTAGTAACAAGGCCAAAAC 57.343 30.769 5.01 0.00 0.00 2.43
194 195 9.103861 CAAGAAAAATTAGTAACAAGGCCAAAA 57.896 29.630 5.01 0.00 0.00 2.44
195 196 8.478877 TCAAGAAAAATTAGTAACAAGGCCAAA 58.521 29.630 5.01 0.00 0.00 3.28
196 197 8.012957 TCAAGAAAAATTAGTAACAAGGCCAA 57.987 30.769 5.01 0.00 0.00 4.52
197 198 7.589958 TCAAGAAAAATTAGTAACAAGGCCA 57.410 32.000 5.01 0.00 0.00 5.36
198 199 8.141909 AGTTCAAGAAAAATTAGTAACAAGGCC 58.858 33.333 0.00 0.00 0.00 5.19
217 218 9.936759 AAAGAAGAACCTTAGATCTAGTTCAAG 57.063 33.333 25.26 13.70 40.82 3.02
282 283 7.457060 GTTTCTAAAAAGAGCCTTAGATGACG 58.543 38.462 0.00 0.00 34.84 4.35
354 421 5.831702 TTCGGTTGCTAGTTTGGTTTTAA 57.168 34.783 0.00 0.00 0.00 1.52
355 422 5.334260 CGATTCGGTTGCTAGTTTGGTTTTA 60.334 40.000 0.00 0.00 0.00 1.52
381 448 3.695830 AAATCTAAACCGACAGGCTCA 57.304 42.857 0.00 0.00 42.76 4.26
385 452 5.704053 ACCAGTAAAAATCTAAACCGACAGG 59.296 40.000 0.00 0.00 45.13 4.00
417 484 1.466950 GCAAATGGACCGATGAAACGA 59.533 47.619 0.00 0.00 35.09 3.85
420 487 1.466950 GTCGCAAATGGACCGATGAAA 59.533 47.619 0.00 0.00 33.24 2.69
520 588 9.884465 GGCTAATGACACTGTGATTTATTAATC 57.116 33.333 15.86 0.00 40.50 1.75
554 622 6.071616 GGCAAGACATCCTAAAACCACAATAA 60.072 38.462 0.00 0.00 0.00 1.40
560 628 3.073798 TGAGGCAAGACATCCTAAAACCA 59.926 43.478 0.00 0.00 31.71 3.67
562 630 4.096984 CCATGAGGCAAGACATCCTAAAAC 59.903 45.833 0.00 0.00 31.71 2.43
563 631 4.272489 CCATGAGGCAAGACATCCTAAAA 58.728 43.478 0.00 0.00 31.71 1.52
569 637 2.486191 CCTACCCATGAGGCAAGACATC 60.486 54.545 0.00 0.00 40.58 3.06
583 651 4.798882 ACAAAGAATCAAACACCTACCCA 58.201 39.130 0.00 0.00 0.00 4.51
585 653 7.328493 GCATTAACAAAGAATCAAACACCTACC 59.672 37.037 0.00 0.00 0.00 3.18
586 654 7.865385 TGCATTAACAAAGAATCAAACACCTAC 59.135 33.333 0.00 0.00 0.00 3.18
696 764 1.460689 ACTGGAGGTCCAACCGGAA 60.461 57.895 9.46 0.00 46.97 4.30
709 777 0.841289 AAAAACCGGACTGGACTGGA 59.159 50.000 9.46 0.00 42.00 3.86
717 785 6.429078 GTGAGGATAGTTTTAAAAACCGGACT 59.571 38.462 9.46 0.00 0.00 3.85
721 789 7.867752 TCTTGTGAGGATAGTTTTAAAAACCG 58.132 34.615 1.31 0.00 0.00 4.44
722 790 9.841880 GATCTTGTGAGGATAGTTTTAAAAACC 57.158 33.333 1.31 4.70 0.00 3.27
887 959 2.162906 AACTGACCCATGGGCTGGT 61.163 57.895 31.73 22.04 44.30 4.00
1234 1379 3.771160 GAGGCCGGCGAGGAAAGA 61.771 66.667 22.54 0.00 45.00 2.52
1820 1968 1.372087 CTTCAGCAACGATGGAGCCC 61.372 60.000 0.00 0.00 0.00 5.19
1828 1976 1.176619 TCGGACCTCTTCAGCAACGA 61.177 55.000 0.00 0.00 0.00 3.85
1924 2072 0.471617 AGGCTGAAAGTGAGCAGTGT 59.528 50.000 0.00 0.00 38.27 3.55
1956 2104 1.623811 ACAACATAGTGTCGGGCTCTT 59.376 47.619 0.00 0.00 0.00 2.85
1960 2108 3.332034 ACTTTACAACATAGTGTCGGGC 58.668 45.455 0.00 0.00 32.75 6.13
2028 2176 1.444836 TCCCGGTAATTTTGACTGCG 58.555 50.000 0.00 0.00 0.00 5.18
2037 2185 3.767131 CCACAAATTCCTTCCCGGTAATT 59.233 43.478 0.00 0.00 0.00 1.40
2038 2186 3.010808 TCCACAAATTCCTTCCCGGTAAT 59.989 43.478 0.00 0.00 0.00 1.89
2040 2188 1.986631 TCCACAAATTCCTTCCCGGTA 59.013 47.619 0.00 0.00 0.00 4.02
2045 2193 4.827284 TGAACTTCTCCACAAATTCCTTCC 59.173 41.667 0.00 0.00 0.00 3.46
2051 2199 5.127682 GGGCATATGAACTTCTCCACAAATT 59.872 40.000 6.97 0.00 0.00 1.82
2056 2204 3.118261 TGAGGGCATATGAACTTCTCCAC 60.118 47.826 6.97 0.00 0.00 4.02
2109 2257 1.936436 CTTTGCAGGCTGCCGCATAA 61.936 55.000 34.58 19.94 44.23 1.90
2110 2258 2.360978 TTTGCAGGCTGCCGCATA 60.361 55.556 34.58 23.62 44.23 3.14
2111 2259 3.755628 CTTTGCAGGCTGCCGCAT 61.756 61.111 34.58 6.10 44.23 4.73
2112 2260 4.953010 TCTTTGCAGGCTGCCGCA 62.953 61.111 34.58 26.28 44.23 5.69
2113 2261 3.446570 ATCTTTGCAGGCTGCCGC 61.447 61.111 34.58 22.57 44.23 6.53
2114 2262 1.588824 TTCATCTTTGCAGGCTGCCG 61.589 55.000 34.58 22.67 44.23 5.69
2115 2263 0.172803 CTTCATCTTTGCAGGCTGCC 59.827 55.000 34.58 18.22 44.23 4.85
2116 2264 0.886563 ACTTCATCTTTGCAGGCTGC 59.113 50.000 31.91 31.91 45.29 5.25
2117 2265 1.402456 GCACTTCATCTTTGCAGGCTG 60.402 52.381 10.94 10.94 36.22 4.85
2118 2266 0.886563 GCACTTCATCTTTGCAGGCT 59.113 50.000 0.00 0.00 36.22 4.58
2119 2267 0.108945 GGCACTTCATCTTTGCAGGC 60.109 55.000 0.00 0.00 38.04 4.85
2120 2268 0.169672 CGGCACTTCATCTTTGCAGG 59.830 55.000 0.00 0.00 38.04 4.85
2121 2269 1.135859 GTCGGCACTTCATCTTTGCAG 60.136 52.381 0.00 0.00 38.04 4.41
2122 2270 0.874390 GTCGGCACTTCATCTTTGCA 59.126 50.000 0.00 0.00 38.04 4.08
2123 2271 1.160137 AGTCGGCACTTCATCTTTGC 58.840 50.000 0.00 0.00 35.40 3.68
2124 2272 3.849911 TCTAGTCGGCACTTCATCTTTG 58.150 45.455 0.00 0.00 33.62 2.77
2125 2273 4.744795 ATCTAGTCGGCACTTCATCTTT 57.255 40.909 0.00 0.00 33.62 2.52
2126 2274 4.160439 TGAATCTAGTCGGCACTTCATCTT 59.840 41.667 0.00 0.00 33.62 2.40
2127 2275 3.701542 TGAATCTAGTCGGCACTTCATCT 59.298 43.478 0.00 0.00 33.62 2.90
2128 2276 4.046938 TGAATCTAGTCGGCACTTCATC 57.953 45.455 0.00 0.00 33.62 2.92
2129 2277 3.701542 TCTGAATCTAGTCGGCACTTCAT 59.298 43.478 0.00 0.00 33.62 2.57
2130 2278 3.089284 TCTGAATCTAGTCGGCACTTCA 58.911 45.455 0.00 0.00 33.62 3.02
2131 2279 3.784701 TCTGAATCTAGTCGGCACTTC 57.215 47.619 0.00 0.00 33.62 3.01
2132 2280 4.744795 AATCTGAATCTAGTCGGCACTT 57.255 40.909 0.00 0.00 33.62 3.16
2133 2281 4.744795 AAATCTGAATCTAGTCGGCACT 57.255 40.909 0.00 0.00 36.55 4.40
2134 2282 5.348986 TGTAAATCTGAATCTAGTCGGCAC 58.651 41.667 0.00 0.00 0.00 5.01
2135 2283 5.592104 TGTAAATCTGAATCTAGTCGGCA 57.408 39.130 0.00 0.00 0.00 5.69
2136 2284 6.216569 TCATGTAAATCTGAATCTAGTCGGC 58.783 40.000 0.00 0.00 0.00 5.54
2137 2285 7.169982 GGTTCATGTAAATCTGAATCTAGTCGG 59.830 40.741 0.00 0.00 34.18 4.79
2138 2286 7.706607 TGGTTCATGTAAATCTGAATCTAGTCG 59.293 37.037 0.00 0.00 34.33 4.18
2139 2287 8.948631 TGGTTCATGTAAATCTGAATCTAGTC 57.051 34.615 0.00 0.00 34.33 2.59
2140 2288 9.388506 CTTGGTTCATGTAAATCTGAATCTAGT 57.611 33.333 0.00 0.00 33.49 2.57
2141 2289 9.605275 TCTTGGTTCATGTAAATCTGAATCTAG 57.395 33.333 0.00 0.00 36.97 2.43
2142 2290 9.383519 GTCTTGGTTCATGTAAATCTGAATCTA 57.616 33.333 0.00 0.00 34.33 1.98
2143 2291 8.105829 AGTCTTGGTTCATGTAAATCTGAATCT 58.894 33.333 0.00 0.00 34.33 2.40
2144 2292 8.180267 CAGTCTTGGTTCATGTAAATCTGAATC 58.820 37.037 0.00 0.00 34.18 2.52
2145 2293 7.121759 CCAGTCTTGGTTCATGTAAATCTGAAT 59.878 37.037 0.00 0.00 39.79 2.57
2146 2294 6.430925 CCAGTCTTGGTTCATGTAAATCTGAA 59.569 38.462 0.00 0.00 39.79 3.02
2147 2295 5.939883 CCAGTCTTGGTTCATGTAAATCTGA 59.060 40.000 0.00 0.00 39.79 3.27
2148 2296 6.187125 CCAGTCTTGGTTCATGTAAATCTG 57.813 41.667 0.00 0.00 39.79 2.90
2157 2305 8.342511 TGAATTTTCAGACCAGTCTTGGTTCAT 61.343 37.037 0.00 0.00 44.36 2.57
2158 2306 7.083197 TGAATTTTCAGACCAGTCTTGGTTCA 61.083 38.462 0.00 2.95 44.36 3.18
2159 2307 5.299279 TGAATTTTCAGACCAGTCTTGGTTC 59.701 40.000 0.00 0.61 44.36 3.62
2160 2308 5.200483 TGAATTTTCAGACCAGTCTTGGTT 58.800 37.500 0.00 0.00 44.36 3.67
2161 2309 4.792068 TGAATTTTCAGACCAGTCTTGGT 58.208 39.130 0.00 0.00 45.81 3.67
2162 2310 5.972107 ATGAATTTTCAGACCAGTCTTGG 57.028 39.130 0.00 0.00 44.68 3.61
2163 2311 8.019669 CAGTTATGAATTTTCAGACCAGTCTTG 58.980 37.037 0.00 0.00 41.08 3.02
2164 2312 7.308830 GCAGTTATGAATTTTCAGACCAGTCTT 60.309 37.037 0.00 0.00 41.08 3.01
2165 2313 6.150140 GCAGTTATGAATTTTCAGACCAGTCT 59.850 38.462 0.00 0.00 41.08 3.24
2166 2314 6.072508 TGCAGTTATGAATTTTCAGACCAGTC 60.073 38.462 0.00 0.00 41.08 3.51
2167 2315 5.769662 TGCAGTTATGAATTTTCAGACCAGT 59.230 36.000 0.00 0.00 41.08 4.00
2168 2316 6.258230 TGCAGTTATGAATTTTCAGACCAG 57.742 37.500 0.00 0.00 41.08 4.00
2169 2317 6.839124 ATGCAGTTATGAATTTTCAGACCA 57.161 33.333 0.00 0.00 41.08 4.02
2170 2318 7.864379 CCATATGCAGTTATGAATTTTCAGACC 59.136 37.037 8.59 0.00 41.08 3.85
2171 2319 7.380602 GCCATATGCAGTTATGAATTTTCAGAC 59.619 37.037 8.59 1.30 39.34 3.51
2172 2320 7.428020 GCCATATGCAGTTATGAATTTTCAGA 58.572 34.615 8.59 0.00 39.34 3.27
2173 2321 7.633361 GCCATATGCAGTTATGAATTTTCAG 57.367 36.000 8.59 0.00 39.34 3.02
2189 2337 5.062558 GTGAAGATTTTGTTGTGCCATATGC 59.937 40.000 0.00 0.00 41.77 3.14
2190 2338 6.392354 AGTGAAGATTTTGTTGTGCCATATG 58.608 36.000 0.00 0.00 0.00 1.78
2191 2339 6.350445 GGAGTGAAGATTTTGTTGTGCCATAT 60.350 38.462 0.00 0.00 0.00 1.78
2192 2340 5.048083 GGAGTGAAGATTTTGTTGTGCCATA 60.048 40.000 0.00 0.00 0.00 2.74
2193 2341 4.262164 GGAGTGAAGATTTTGTTGTGCCAT 60.262 41.667 0.00 0.00 0.00 4.40
2194 2342 3.068024 GGAGTGAAGATTTTGTTGTGCCA 59.932 43.478 0.00 0.00 0.00 4.92
2195 2343 3.319122 AGGAGTGAAGATTTTGTTGTGCC 59.681 43.478 0.00 0.00 0.00 5.01
2196 2344 4.540824 GAGGAGTGAAGATTTTGTTGTGC 58.459 43.478 0.00 0.00 0.00 4.57
2197 2345 4.273480 ACGAGGAGTGAAGATTTTGTTGTG 59.727 41.667 0.00 0.00 0.00 3.33
2198 2346 4.451900 ACGAGGAGTGAAGATTTTGTTGT 58.548 39.130 0.00 0.00 0.00 3.32
2199 2347 6.368791 TGATACGAGGAGTGAAGATTTTGTTG 59.631 38.462 0.00 0.00 0.00 3.33
2200 2348 6.464222 TGATACGAGGAGTGAAGATTTTGTT 58.536 36.000 0.00 0.00 0.00 2.83
2201 2349 6.037786 TGATACGAGGAGTGAAGATTTTGT 57.962 37.500 0.00 0.00 0.00 2.83
2202 2350 6.510799 GCATGATACGAGGAGTGAAGATTTTG 60.511 42.308 0.00 0.00 0.00 2.44
2203 2351 5.525378 GCATGATACGAGGAGTGAAGATTTT 59.475 40.000 0.00 0.00 0.00 1.82
2204 2352 5.053145 GCATGATACGAGGAGTGAAGATTT 58.947 41.667 0.00 0.00 0.00 2.17
2205 2353 4.343526 AGCATGATACGAGGAGTGAAGATT 59.656 41.667 0.00 0.00 0.00 2.40
2206 2354 3.894427 AGCATGATACGAGGAGTGAAGAT 59.106 43.478 0.00 0.00 0.00 2.40
2207 2355 3.291584 AGCATGATACGAGGAGTGAAGA 58.708 45.455 0.00 0.00 0.00 2.87
2208 2356 3.724508 AGCATGATACGAGGAGTGAAG 57.275 47.619 0.00 0.00 0.00 3.02
2209 2357 5.301805 TGAATAGCATGATACGAGGAGTGAA 59.698 40.000 0.00 0.00 0.00 3.18
2210 2358 4.827284 TGAATAGCATGATACGAGGAGTGA 59.173 41.667 0.00 0.00 0.00 3.41
2211 2359 5.126396 TGAATAGCATGATACGAGGAGTG 57.874 43.478 0.00 0.00 0.00 3.51
2212 2360 5.991933 ATGAATAGCATGATACGAGGAGT 57.008 39.130 0.00 0.00 35.42 3.85
2213 2361 5.809562 GGAATGAATAGCATGATACGAGGAG 59.190 44.000 0.00 0.00 37.28 3.69
2214 2362 5.481824 AGGAATGAATAGCATGATACGAGGA 59.518 40.000 0.00 0.00 37.28 3.71
2215 2363 5.579904 CAGGAATGAATAGCATGATACGAGG 59.420 44.000 0.00 0.00 37.28 4.63
2216 2364 6.393171 TCAGGAATGAATAGCATGATACGAG 58.607 40.000 0.00 0.00 37.28 4.18
2217 2365 6.345096 TCAGGAATGAATAGCATGATACGA 57.655 37.500 0.00 0.00 37.28 3.43
2218 2366 7.606858 AATCAGGAATGAATAGCATGATACG 57.393 36.000 0.00 0.00 37.28 3.06
2221 2369 9.011095 CACTAAATCAGGAATGAATAGCATGAT 57.989 33.333 0.00 0.00 37.28 2.45
2222 2370 7.994911 ACACTAAATCAGGAATGAATAGCATGA 59.005 33.333 0.00 0.00 37.28 3.07
2223 2371 8.162878 ACACTAAATCAGGAATGAATAGCATG 57.837 34.615 0.00 0.00 37.28 4.06
2224 2372 8.627403 CAACACTAAATCAGGAATGAATAGCAT 58.373 33.333 0.00 0.00 39.43 3.79
2225 2373 7.611467 ACAACACTAAATCAGGAATGAATAGCA 59.389 33.333 0.00 0.00 0.00 3.49
2226 2374 7.989826 ACAACACTAAATCAGGAATGAATAGC 58.010 34.615 0.00 0.00 0.00 2.97
2227 2375 9.778993 CAACAACACTAAATCAGGAATGAATAG 57.221 33.333 0.00 0.00 0.00 1.73
2228 2376 8.739039 CCAACAACACTAAATCAGGAATGAATA 58.261 33.333 0.00 0.00 0.00 1.75
2229 2377 7.605449 CCAACAACACTAAATCAGGAATGAAT 58.395 34.615 0.00 0.00 0.00 2.57
2230 2378 6.516527 GCCAACAACACTAAATCAGGAATGAA 60.517 38.462 0.00 0.00 0.00 2.57
2231 2379 5.048083 GCCAACAACACTAAATCAGGAATGA 60.048 40.000 0.00 0.00 0.00 2.57
2232 2380 5.163513 GCCAACAACACTAAATCAGGAATG 58.836 41.667 0.00 0.00 0.00 2.67
2233 2381 4.220602 GGCCAACAACACTAAATCAGGAAT 59.779 41.667 0.00 0.00 0.00 3.01
2234 2382 3.572255 GGCCAACAACACTAAATCAGGAA 59.428 43.478 0.00 0.00 0.00 3.36
2235 2383 3.153919 GGCCAACAACACTAAATCAGGA 58.846 45.455 0.00 0.00 0.00 3.86
2236 2384 3.157087 AGGCCAACAACACTAAATCAGG 58.843 45.455 5.01 0.00 0.00 3.86
2237 2385 5.473504 AGTTAGGCCAACAACACTAAATCAG 59.526 40.000 5.01 0.00 39.81 2.90
2238 2386 5.240623 CAGTTAGGCCAACAACACTAAATCA 59.759 40.000 5.01 0.00 39.81 2.57
2239 2387 5.472137 TCAGTTAGGCCAACAACACTAAATC 59.528 40.000 5.01 0.00 39.81 2.17
2240 2388 5.381757 TCAGTTAGGCCAACAACACTAAAT 58.618 37.500 5.01 0.00 39.81 1.40
2241 2389 4.783055 TCAGTTAGGCCAACAACACTAAA 58.217 39.130 5.01 0.00 39.81 1.85
2242 2390 4.425180 TCAGTTAGGCCAACAACACTAA 57.575 40.909 5.01 0.00 39.81 2.24
2243 2391 4.425180 TTCAGTTAGGCCAACAACACTA 57.575 40.909 5.01 0.00 39.81 2.74
2244 2392 3.290948 TTCAGTTAGGCCAACAACACT 57.709 42.857 5.01 0.00 39.81 3.55
2245 2393 3.305335 CCATTCAGTTAGGCCAACAACAC 60.305 47.826 5.01 0.00 39.81 3.32
2246 2394 2.890311 CCATTCAGTTAGGCCAACAACA 59.110 45.455 5.01 0.00 39.81 3.33
2247 2395 2.890945 ACCATTCAGTTAGGCCAACAAC 59.109 45.455 5.01 6.12 39.81 3.32
2248 2396 3.237268 ACCATTCAGTTAGGCCAACAA 57.763 42.857 5.01 0.00 39.81 2.83
2249 2397 2.969821 ACCATTCAGTTAGGCCAACA 57.030 45.000 5.01 0.00 39.81 3.33
2250 2398 3.951663 ACTACCATTCAGTTAGGCCAAC 58.048 45.455 5.01 7.78 37.41 3.77
2251 2399 4.331968 CAACTACCATTCAGTTAGGCCAA 58.668 43.478 5.01 0.00 34.50 4.52
2252 2400 3.308117 CCAACTACCATTCAGTTAGGCCA 60.308 47.826 5.01 0.00 34.50 5.36
2253 2401 3.279434 CCAACTACCATTCAGTTAGGCC 58.721 50.000 0.00 0.00 34.50 5.19
2254 2402 2.683362 GCCAACTACCATTCAGTTAGGC 59.317 50.000 10.63 10.63 40.06 3.93
2255 2403 3.941483 CAGCCAACTACCATTCAGTTAGG 59.059 47.826 0.00 0.00 34.50 2.69
2256 2404 3.375299 GCAGCCAACTACCATTCAGTTAG 59.625 47.826 0.00 0.00 34.50 2.34
2257 2405 3.009033 AGCAGCCAACTACCATTCAGTTA 59.991 43.478 0.00 0.00 34.50 2.24
2258 2406 2.162681 GCAGCCAACTACCATTCAGTT 58.837 47.619 0.00 0.00 36.68 3.16
2259 2407 1.352352 AGCAGCCAACTACCATTCAGT 59.648 47.619 0.00 0.00 0.00 3.41
2260 2408 2.119801 AGCAGCCAACTACCATTCAG 57.880 50.000 0.00 0.00 0.00 3.02
2261 2409 3.455910 AGATAGCAGCCAACTACCATTCA 59.544 43.478 0.00 0.00 0.00 2.57
2262 2410 4.078639 AGATAGCAGCCAACTACCATTC 57.921 45.455 0.00 0.00 0.00 2.67
2263 2411 5.832539 ATAGATAGCAGCCAACTACCATT 57.167 39.130 0.00 0.00 0.00 3.16
2264 2412 5.832539 AATAGATAGCAGCCAACTACCAT 57.167 39.130 0.00 0.00 0.00 3.55
2265 2413 6.935240 ATAATAGATAGCAGCCAACTACCA 57.065 37.500 0.00 0.00 0.00 3.25
2266 2414 9.892130 ATAAATAATAGATAGCAGCCAACTACC 57.108 33.333 0.00 0.00 0.00 3.18
2287 2435 9.094578 ACCTCAGCATACAGACATACTATAAAT 57.905 33.333 0.00 0.00 0.00 1.40
2288 2436 8.478775 ACCTCAGCATACAGACATACTATAAA 57.521 34.615 0.00 0.00 0.00 1.40
2289 2437 8.360390 CAACCTCAGCATACAGACATACTATAA 58.640 37.037 0.00 0.00 0.00 0.98
2290 2438 7.523873 GCAACCTCAGCATACAGACATACTATA 60.524 40.741 0.00 0.00 0.00 1.31
2291 2439 6.739843 GCAACCTCAGCATACAGACATACTAT 60.740 42.308 0.00 0.00 0.00 2.12
2292 2440 5.451937 GCAACCTCAGCATACAGACATACTA 60.452 44.000 0.00 0.00 0.00 1.82
2293 2441 4.681781 GCAACCTCAGCATACAGACATACT 60.682 45.833 0.00 0.00 0.00 2.12
2294 2442 3.557595 GCAACCTCAGCATACAGACATAC 59.442 47.826 0.00 0.00 0.00 2.39
2295 2443 3.432186 GGCAACCTCAGCATACAGACATA 60.432 47.826 0.00 0.00 0.00 2.29
2296 2444 2.636830 GCAACCTCAGCATACAGACAT 58.363 47.619 0.00 0.00 0.00 3.06
2297 2445 1.339055 GGCAACCTCAGCATACAGACA 60.339 52.381 0.00 0.00 0.00 3.41
2298 2446 1.339055 TGGCAACCTCAGCATACAGAC 60.339 52.381 0.00 0.00 0.00 3.51
2299 2447 0.983467 TGGCAACCTCAGCATACAGA 59.017 50.000 0.00 0.00 0.00 3.41
2300 2448 2.048444 ATGGCAACCTCAGCATACAG 57.952 50.000 0.00 0.00 0.00 2.74
2301 2449 2.093890 CAATGGCAACCTCAGCATACA 58.906 47.619 0.00 0.00 0.00 2.29
2302 2450 1.202336 GCAATGGCAACCTCAGCATAC 60.202 52.381 0.00 0.00 40.72 2.39
2303 2451 1.105457 GCAATGGCAACCTCAGCATA 58.895 50.000 0.00 0.00 40.72 3.14
2314 2462 2.295909 GGACTTACAAACAGCAATGGCA 59.704 45.455 0.00 0.00 44.61 4.92
2328 2476 1.271926 ACAGCACCATTGGGGACTTAC 60.272 52.381 9.79 0.00 41.15 2.34
2351 2499 1.002430 CTGCAGCAGGTCCTTAGACAA 59.998 52.381 15.35 0.00 45.48 3.18
2352 2500 0.610174 CTGCAGCAGGTCCTTAGACA 59.390 55.000 15.35 0.00 45.48 3.41
2380 2528 3.364549 CACCTCAGAGATCAGGAACTCT 58.635 50.000 0.00 3.51 43.13 3.24
2408 2556 0.538516 TGTGCCAAGTATGCCGGTTT 60.539 50.000 1.90 0.00 0.00 3.27
2420 2568 0.321210 AATGTCGACCGATGTGCCAA 60.321 50.000 14.12 0.00 0.00 4.52
2422 2570 1.715585 CAATGTCGACCGATGTGCC 59.284 57.895 14.12 0.00 0.00 5.01
2425 2573 1.449601 GGGCAATGTCGACCGATGT 60.450 57.895 14.12 0.00 0.00 3.06
2432 2580 0.390603 CCGTAAGTGGGCAATGTCGA 60.391 55.000 0.00 0.00 0.00 4.20
2442 2590 2.584608 CCTCCAGGCCGTAAGTGG 59.415 66.667 0.00 0.00 32.63 4.00
2467 2615 2.994186 AAACGTAGTATCGGGGCATT 57.006 45.000 0.00 0.00 45.00 3.56
2500 2648 8.054572 TGGTCTTGATCTATGAATCCATTTTCA 58.945 33.333 0.00 0.00 39.77 2.69
2512 2660 5.867903 AGAAGTCCTGGTCTTGATCTATG 57.132 43.478 10.93 0.00 0.00 2.23
2513 2661 6.882768 AAAGAAGTCCTGGTCTTGATCTAT 57.117 37.500 10.93 0.00 34.33 1.98
2521 2669 4.042187 ACTGCATTAAAGAAGTCCTGGTCT 59.958 41.667 0.00 0.00 0.00 3.85
2526 2674 4.946157 CCATGACTGCATTAAAGAAGTCCT 59.054 41.667 14.78 3.91 42.52 3.85
2702 2858 1.234615 ACCAGTGCGATGTTTTCCCG 61.235 55.000 0.00 0.00 0.00 5.14
2703 2859 1.816074 TACCAGTGCGATGTTTTCCC 58.184 50.000 0.00 0.00 0.00 3.97
2764 2940 6.267699 TGATCTCACTCTCTTAGTTCCAAACA 59.732 38.462 0.00 0.00 35.76 2.83
2765 2941 6.692486 TGATCTCACTCTCTTAGTTCCAAAC 58.308 40.000 0.00 0.00 35.76 2.93
2863 3072 3.347216 AGGGTTGCACTATAAACTGCAG 58.653 45.455 13.48 13.48 44.05 4.41
2872 3081 2.706190 GGTAGATGGAGGGTTGCACTAT 59.294 50.000 0.00 0.00 0.00 2.12
2873 3082 2.116238 GGTAGATGGAGGGTTGCACTA 58.884 52.381 0.00 0.00 0.00 2.74
2875 3084 0.912486 AGGTAGATGGAGGGTTGCAC 59.088 55.000 0.00 0.00 0.00 4.57
2918 3149 5.012046 AGACTTCATATCATATTCGTGGGCA 59.988 40.000 0.00 0.00 0.00 5.36
2922 3153 9.254133 AGTTTGAGACTTCATATCATATTCGTG 57.746 33.333 0.00 0.00 33.92 4.35
2923 3154 9.823647 AAGTTTGAGACTTCATATCATATTCGT 57.176 29.630 0.00 0.00 45.40 3.85
3055 3287 7.767659 TCAACTATCCAGTTTTGAGATCAGATG 59.232 37.037 0.00 0.00 42.51 2.90
3066 3298 7.908453 AGCTTACTACTCAACTATCCAGTTTT 58.092 34.615 0.00 0.00 42.51 2.43
3073 3305 8.674263 TGGTACTAGCTTACTACTCAACTATC 57.326 38.462 0.00 0.00 0.00 2.08
3088 3320 5.491982 CTTTCACCAGAAATGGTACTAGCT 58.508 41.667 0.00 0.00 42.49 3.32
3102 3334 5.705441 TGAAATACAAGTAGGCTTTCACCAG 59.295 40.000 0.00 0.00 32.52 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.