Multiple sequence alignment - TraesCS6B01G076300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G076300 chr6B 100.000 7457 0 0 1 7457 52356596 52349140 0.000000e+00 13771.0
1 TraesCS6B01G076300 chr6B 86.212 4330 486 55 2412 6684 51756304 51760579 0.000000e+00 4586.0
2 TraesCS6B01G076300 chr6B 85.253 4401 523 39 2466 6813 51919439 51923766 0.000000e+00 4416.0
3 TraesCS6B01G076300 chr6B 85.578 3675 451 37 2476 6103 52179309 52175667 0.000000e+00 3777.0
4 TraesCS6B01G076300 chr6B 86.661 3246 387 26 2476 5683 51946212 51949449 0.000000e+00 3554.0
5 TraesCS6B01G076300 chr6B 86.923 1690 212 7 2466 4149 52229712 52228026 0.000000e+00 1888.0
6 TraesCS6B01G076300 chr6B 84.980 1225 146 13 4212 5434 52226105 52224917 0.000000e+00 1208.0
7 TraesCS6B01G076300 chr6B 87.231 697 73 14 6123 6813 52175713 52175027 0.000000e+00 780.0
8 TraesCS6B01G076300 chr6B 82.503 823 123 16 5362 6166 52224890 52224071 0.000000e+00 702.0
9 TraesCS6B01G076300 chr6B 84.887 708 91 10 1732 2425 52180092 52179387 0.000000e+00 701.0
10 TraesCS6B01G076300 chr6B 84.615 702 85 11 1732 2425 51755592 51756278 0.000000e+00 676.0
11 TraesCS6B01G076300 chr6B 83.921 709 87 21 1729 2425 51945441 51946134 0.000000e+00 652.0
12 TraesCS6B01G076300 chr6B 83.190 696 76 17 1732 2423 52230371 52229713 3.850000e-167 599.0
13 TraesCS6B01G076300 chr6B 87.554 466 56 2 1730 2195 51918783 51919246 8.510000e-149 538.0
14 TraesCS6B01G076300 chr6B 82.975 605 83 14 5766 6354 51949469 51950069 5.120000e-146 529.0
15 TraesCS6B01G076300 chr6B 90.585 393 25 6 632 1012 716112475 716112867 1.860000e-140 510.0
16 TraesCS6B01G076300 chr6B 89.203 389 34 5 633 1013 321300624 321301012 5.230000e-131 479.0
17 TraesCS6B01G076300 chr6B 85.931 462 41 12 6360 6813 51950609 51951054 8.760000e-129 472.0
18 TraesCS6B01G076300 chr6B 83.302 533 59 9 6205 6736 52224176 52223673 1.470000e-126 464.0
19 TraesCS6B01G076300 chr6B 88.889 198 13 6 6565 6761 52349738 52349549 1.250000e-57 235.0
20 TraesCS6B01G076300 chr6B 88.889 198 13 6 6859 7048 52350032 52349836 1.250000e-57 235.0
21 TraesCS6B01G076300 chr6B 88.525 183 18 1 2244 2423 51919256 51919438 1.260000e-52 219.0
22 TraesCS6B01G076300 chr6B 74.718 621 82 44 6898 7457 52223806 52223200 2.730000e-49 207.0
23 TraesCS6B01G076300 chr6D 96.156 6426 183 31 1071 7457 28300592 28294192 0.000000e+00 10440.0
24 TraesCS6B01G076300 chr6D 87.318 3848 426 31 1723 5538 27977802 27981619 0.000000e+00 4346.0
25 TraesCS6B01G076300 chr6D 86.214 1001 116 11 5826 6813 27981826 27982817 0.000000e+00 1064.0
26 TraesCS6B01G076300 chr6D 86.342 637 47 11 1 630 28301210 28300607 0.000000e+00 658.0
27 TraesCS6B01G076300 chr6D 85.619 299 27 11 6565 6858 28294809 28294522 4.370000e-77 300.0
28 TraesCS6B01G076300 chr6D 88.889 198 14 5 6859 7048 28295104 28294907 3.480000e-58 237.0
29 TraesCS6B01G076300 chr6D 88.710 186 10 4 6874 7048 27982572 27982757 4.530000e-52 217.0
30 TraesCS6B01G076300 chr6D 98.387 62 1 0 1017 1078 28300621 28300560 7.910000e-20 110.0
31 TraesCS6B01G076300 chr6A 87.133 3847 437 30 1723 5541 29881419 29877603 0.000000e+00 4309.0
32 TraesCS6B01G076300 chr6A 85.672 1005 114 20 5826 6813 29877399 29876408 0.000000e+00 1031.0
33 TraesCS6B01G076300 chr6A 87.469 407 28 10 1 396 29606380 29606774 1.480000e-121 448.0
34 TraesCS6B01G076300 chr6A 79.888 537 35 25 1140 1631 29606709 29607217 7.220000e-85 326.0
35 TraesCS6B01G076300 chr6A 84.762 210 17 8 6857 7051 29876663 29876454 5.900000e-46 196.0
36 TraesCS6B01G076300 chrUn 86.593 3252 390 26 2476 5689 272919319 272916076 0.000000e+00 3548.0
37 TraesCS6B01G076300 chrUn 83.994 706 86 21 1732 2425 272920087 272919397 0.000000e+00 652.0
38 TraesCS6B01G076300 chrUn 82.975 605 83 14 5766 6354 272916062 272915462 5.120000e-146 529.0
39 TraesCS6B01G076300 chrUn 89.247 372 37 1 4628 4999 476730155 476730523 5.270000e-126 462.0
40 TraesCS6B01G076300 chr1A 91.071 392 31 3 632 1019 250773636 250773245 1.840000e-145 527.0
41 TraesCS6B01G076300 chr7B 90.585 393 29 4 635 1019 604309520 604309128 1.430000e-141 514.0
42 TraesCS6B01G076300 chr3A 88.030 401 35 13 632 1019 208384552 208384152 5.270000e-126 462.0
43 TraesCS6B01G076300 chr4A 87.532 385 40 5 632 1008 416256686 416256302 8.880000e-119 438.0
44 TraesCS6B01G076300 chr2A 87.013 385 43 6 635 1013 552061850 552061467 1.920000e-115 427.0
45 TraesCS6B01G076300 chr2A 73.779 389 63 29 632 990 513101754 513102133 4.730000e-22 117.0
46 TraesCS6B01G076300 chr2A 92.727 55 2 2 632 685 7532546 7532599 2.230000e-10 78.7
47 TraesCS6B01G076300 chr2B 85.340 382 49 4 633 1013 406281575 406281950 9.070000e-104 388.0
48 TraesCS6B01G076300 chr1B 85.117 383 50 5 632 1013 278463864 278464240 1.170000e-102 385.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G076300 chr6B 52349140 52356596 7456 True 13771.000000 13771 100.000000 1 7457 1 chr6B.!!$R1 7456
1 TraesCS6B01G076300 chr6B 51755592 51760579 4987 False 2631.000000 4586 85.413500 1732 6684 2 chr6B.!!$F3 4952
2 TraesCS6B01G076300 chr6B 52175027 52180092 5065 True 1752.666667 3777 85.898667 1732 6813 3 chr6B.!!$R2 5081
3 TraesCS6B01G076300 chr6B 51918783 51923766 4983 False 1724.333333 4416 87.110667 1730 6813 3 chr6B.!!$F4 5083
4 TraesCS6B01G076300 chr6B 51945441 51951054 5613 False 1301.750000 3554 84.872000 1729 6813 4 chr6B.!!$F5 5084
5 TraesCS6B01G076300 chr6B 52223200 52230371 7171 True 844.666667 1888 82.602667 1732 7457 6 chr6B.!!$R3 5725
6 TraesCS6B01G076300 chr6D 28294192 28300592 6400 True 10440.000000 10440 96.156000 1071 7457 1 chr6D.!!$R1 6386
7 TraesCS6B01G076300 chr6D 27977802 27982817 5015 False 1875.666667 4346 87.414000 1723 7048 3 chr6D.!!$F1 5325
8 TraesCS6B01G076300 chr6D 28300560 28301210 650 True 384.000000 658 92.364500 1 1078 2 chr6D.!!$R3 1077
9 TraesCS6B01G076300 chr6D 28294522 28295104 582 True 268.500000 300 87.254000 6565 7048 2 chr6D.!!$R2 483
10 TraesCS6B01G076300 chr6A 29876408 29881419 5011 True 1845.333333 4309 85.855667 1723 7051 3 chr6A.!!$R1 5328
11 TraesCS6B01G076300 chr6A 29606380 29607217 837 False 387.000000 448 83.678500 1 1631 2 chr6A.!!$F1 1630
12 TraesCS6B01G076300 chrUn 272915462 272920087 4625 True 1576.333333 3548 84.520667 1732 6354 3 chrUn.!!$R1 4622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
772 778 0.031178 GCACAGTTCAACAAGCCCTG 59.969 55.000 0.00 0.00 0.00 4.45 F
953 959 0.035317 CAGAGCTGCAAGTACCCACA 59.965 55.000 1.02 0.00 35.30 4.17 F
954 960 0.035458 AGAGCTGCAAGTACCCACAC 59.965 55.000 1.02 0.00 35.30 3.82 F
1367 1379 0.036306 GACACACGGGTTCCAAGGAT 59.964 55.000 0.00 0.00 0.00 3.24 F
2001 2062 1.001974 GCATACGGGGCTGATGATGTA 59.998 52.381 0.00 0.00 0.00 2.29 F
2871 3073 1.210931 CAGTGCAGATTGGTTGGCG 59.789 57.895 0.00 0.00 0.00 5.69 F
4626 6708 0.037326 TGGTTGATGAGCTCCGTGAC 60.037 55.000 12.15 5.11 0.00 3.67 F
4870 6969 0.320771 GCAAGAAGGAGCGAACCTGA 60.321 55.000 1.75 0.00 40.49 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2437 2549 0.761187 TCTCTCTGGCTTGCACACTT 59.239 50.000 0.00 0.00 0.00 3.16 R
2915 3117 0.179181 TTCGTCGGCACTAGCGTTAG 60.179 55.000 4.57 4.57 43.41 2.34 R
3288 3493 9.112725 TCCAAAGTAAGTTGGTTTCTTAGTAAC 57.887 33.333 4.00 0.00 46.93 2.50 R
3360 3565 2.093816 TGGCATGATGTCACTCTCACTC 60.094 50.000 0.00 0.00 0.00 3.51 R
4167 6200 1.482593 CCCACCTCAGGTATGTCAGAC 59.517 57.143 0.00 0.00 32.11 3.51 R
4871 6970 2.426381 CGTAGTCTAGGGAACAAGGTCC 59.574 54.545 0.00 0.00 36.90 4.46 R
6031 8283 0.816825 CAGAGGGATGGGCATGAACG 60.817 60.000 0.00 0.00 0.00 3.95 R
6819 9620 0.819582 AATTTCGAAGCAGGGCATGG 59.180 50.000 0.00 0.00 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.539712 TGCTGTTCATAATTACTCAGCTAAC 57.460 36.000 21.82 8.07 45.39 2.34
86 87 2.871182 TGTCTGCTGTGATCGGTATC 57.129 50.000 0.00 0.00 0.00 2.24
101 102 3.003378 TCGGTATCAGATTCTGCGTAGTG 59.997 47.826 8.89 0.00 0.00 2.74
118 119 1.898094 TGCAATCGCAGCACCTGTT 60.898 52.632 0.00 0.00 45.36 3.16
119 120 1.443194 GCAATCGCAGCACCTGTTG 60.443 57.895 0.00 0.00 38.36 3.33
191 192 3.508744 ATGCTTAAAATTGGTGCCTCG 57.491 42.857 0.00 0.00 0.00 4.63
223 224 2.140839 AGTAGGTAGTACTTGGCGCT 57.859 50.000 7.64 0.00 39.06 5.92
242 243 5.237344 GGCGCTCACTATAGATTGACAATTT 59.763 40.000 7.64 0.00 0.00 1.82
284 285 5.743117 AGGAAATCAGACAGGAAGAATCAG 58.257 41.667 0.00 0.00 0.00 2.90
298 299 5.755861 GGAAGAATCAGATCCTTCTTTACCG 59.244 44.000 9.11 0.00 40.77 4.02
344 346 1.958579 CCAGCACCACCCATTCATATG 59.041 52.381 0.00 0.00 0.00 1.78
365 367 2.867975 GCTGCAGCAACAAACAAAGAAT 59.132 40.909 33.36 0.00 41.59 2.40
367 369 4.365723 CTGCAGCAACAAACAAAGAATCT 58.634 39.130 0.00 0.00 0.00 2.40
370 372 4.365723 CAGCAACAAACAAAGAATCTGCT 58.634 39.130 0.00 0.00 39.38 4.24
391 393 4.517075 GCTTTTGCTCCTCTTCACTACTTT 59.483 41.667 0.00 0.00 43.35 2.66
401 403 5.278022 CCTCTTCACTACTTTTCTTTGCACC 60.278 44.000 0.00 0.00 0.00 5.01
403 405 3.537580 TCACTACTTTTCTTTGCACCGT 58.462 40.909 0.00 0.00 0.00 4.83
404 406 3.942748 TCACTACTTTTCTTTGCACCGTT 59.057 39.130 0.00 0.00 0.00 4.44
413 415 5.446143 TTCTTTGCACCGTTCATAATTGT 57.554 34.783 0.00 0.00 0.00 2.71
414 416 4.793071 TCTTTGCACCGTTCATAATTGTG 58.207 39.130 0.00 0.00 0.00 3.33
421 423 3.623060 ACCGTTCATAATTGTGCAGCTAG 59.377 43.478 0.00 0.00 0.00 3.42
429 431 6.375174 TCATAATTGTGCAGCTAGTTTGTCAT 59.625 34.615 0.00 0.00 0.00 3.06
443 445 8.079809 GCTAGTTTGTCATGCTTTTTAGGTAAA 58.920 33.333 0.00 0.00 0.00 2.01
447 449 7.650834 TTGTCATGCTTTTTAGGTAAATTGC 57.349 32.000 0.00 0.00 0.00 3.56
451 453 5.467035 TGCTTTTTAGGTAAATTGCTGCT 57.533 34.783 0.00 0.00 0.00 4.24
464 466 5.630415 AATTGCTGCTGGAACCTACTATA 57.370 39.130 0.00 0.00 0.00 1.31
467 469 4.483950 TGCTGCTGGAACCTACTATATCT 58.516 43.478 0.00 0.00 0.00 1.98
468 470 4.281941 TGCTGCTGGAACCTACTATATCTG 59.718 45.833 0.00 0.00 0.00 2.90
482 484 6.842437 ACTATATCTGCTGTGATCGGTATT 57.158 37.500 0.00 0.00 0.00 1.89
489 491 5.536538 TCTGCTGTGATCGGTATTAGATTCT 59.463 40.000 0.00 0.00 0.00 2.40
490 492 5.532557 TGCTGTGATCGGTATTAGATTCTG 58.467 41.667 0.00 0.00 0.00 3.02
491 493 4.926238 GCTGTGATCGGTATTAGATTCTGG 59.074 45.833 0.00 0.00 0.00 3.86
502 504 6.651225 GGTATTAGATTCTGGGTAGTGCAATC 59.349 42.308 0.00 0.00 0.00 2.67
526 528 1.354040 CACCTGTCGCTTTAGAGCTG 58.646 55.000 3.50 0.00 46.96 4.24
528 530 1.337260 ACCTGTCGCTTTAGAGCTGTG 60.337 52.381 3.50 0.00 46.96 3.66
537 539 3.929610 GCTTTAGAGCTGTGTGAGGTTAG 59.070 47.826 0.00 0.00 45.65 2.34
543 545 4.160626 AGAGCTGTGTGAGGTTAGTTATCC 59.839 45.833 0.00 0.00 30.42 2.59
589 595 5.652994 ATGCTTAAAATCGGTGCCTTAAA 57.347 34.783 0.00 0.00 0.00 1.52
604 610 7.036829 GGTGCCTTAAAAACAGTTTCAAGTAA 58.963 34.615 14.70 5.84 0.00 2.24
620 626 2.673833 AGTAAGCAGTACTTGTCACGC 58.326 47.619 0.00 0.00 40.33 5.34
621 627 2.035449 AGTAAGCAGTACTTGTCACGCA 59.965 45.455 0.00 0.00 40.33 5.24
622 628 2.169832 AAGCAGTACTTGTCACGCAT 57.830 45.000 0.00 0.00 37.17 4.73
623 629 2.169832 AGCAGTACTTGTCACGCATT 57.830 45.000 0.00 0.00 0.00 3.56
624 630 3.313012 AGCAGTACTTGTCACGCATTA 57.687 42.857 0.00 0.00 0.00 1.90
625 631 3.861840 AGCAGTACTTGTCACGCATTAT 58.138 40.909 0.00 0.00 0.00 1.28
626 632 5.006153 AGCAGTACTTGTCACGCATTATA 57.994 39.130 0.00 0.00 0.00 0.98
627 633 5.043903 AGCAGTACTTGTCACGCATTATAG 58.956 41.667 0.00 0.00 0.00 1.31
628 634 5.041287 GCAGTACTTGTCACGCATTATAGA 58.959 41.667 0.00 0.00 0.00 1.98
629 635 5.692204 GCAGTACTTGTCACGCATTATAGAT 59.308 40.000 0.00 0.00 0.00 1.98
630 636 6.129062 GCAGTACTTGTCACGCATTATAGATC 60.129 42.308 0.00 0.00 0.00 2.75
631 637 6.918022 CAGTACTTGTCACGCATTATAGATCA 59.082 38.462 0.00 0.00 0.00 2.92
632 638 6.918569 AGTACTTGTCACGCATTATAGATCAC 59.081 38.462 0.00 0.00 0.00 3.06
633 639 5.050490 ACTTGTCACGCATTATAGATCACC 58.950 41.667 0.00 0.00 0.00 4.02
634 640 3.638484 TGTCACGCATTATAGATCACCG 58.362 45.455 0.00 0.00 0.00 4.94
635 641 3.316868 TGTCACGCATTATAGATCACCGA 59.683 43.478 0.00 0.00 0.00 4.69
636 642 4.202070 TGTCACGCATTATAGATCACCGAA 60.202 41.667 0.00 0.00 0.00 4.30
637 643 4.743151 GTCACGCATTATAGATCACCGAAA 59.257 41.667 0.00 0.00 0.00 3.46
638 644 5.233476 GTCACGCATTATAGATCACCGAAAA 59.767 40.000 0.00 0.00 0.00 2.29
639 645 5.813157 TCACGCATTATAGATCACCGAAAAA 59.187 36.000 0.00 0.00 0.00 1.94
640 646 6.019075 TCACGCATTATAGATCACCGAAAAAG 60.019 38.462 0.00 0.00 0.00 2.27
641 647 5.236478 ACGCATTATAGATCACCGAAAAAGG 59.764 40.000 0.00 0.00 37.30 3.11
642 648 5.465390 CGCATTATAGATCACCGAAAAAGGA 59.535 40.000 0.00 0.00 34.73 3.36
643 649 6.147821 CGCATTATAGATCACCGAAAAAGGAT 59.852 38.462 0.00 0.00 34.73 3.24
644 650 7.307989 CGCATTATAGATCACCGAAAAAGGATT 60.308 37.037 0.00 0.00 34.73 3.01
645 651 8.352942 GCATTATAGATCACCGAAAAAGGATTT 58.647 33.333 0.00 0.00 42.41 2.17
646 652 9.884465 CATTATAGATCACCGAAAAAGGATTTC 57.116 33.333 0.00 0.00 37.28 2.17
647 653 9.627123 ATTATAGATCACCGAAAAAGGATTTCA 57.373 29.630 0.00 0.00 37.28 2.69
648 654 5.629079 AGATCACCGAAAAAGGATTTCAC 57.371 39.130 0.00 0.00 37.28 3.18
649 655 4.459337 AGATCACCGAAAAAGGATTTCACC 59.541 41.667 0.00 0.00 37.28 4.02
650 656 2.888414 TCACCGAAAAAGGATTTCACCC 59.112 45.455 2.31 0.00 37.28 4.61
651 657 2.029380 CACCGAAAAAGGATTTCACCCC 60.029 50.000 2.31 0.00 37.28 4.95
652 658 1.201414 CCGAAAAAGGATTTCACCCCG 59.799 52.381 2.31 0.00 37.28 5.73
653 659 1.402325 CGAAAAAGGATTTCACCCCGC 60.402 52.381 2.31 0.00 37.28 6.13
654 660 1.893137 GAAAAAGGATTTCACCCCGCT 59.107 47.619 0.00 0.00 37.28 5.52
655 661 2.009681 AAAAGGATTTCACCCCGCTT 57.990 45.000 0.00 0.00 37.28 4.68
656 662 2.009681 AAAGGATTTCACCCCGCTTT 57.990 45.000 0.00 0.00 27.08 3.51
657 663 2.891191 AAGGATTTCACCCCGCTTTA 57.109 45.000 0.00 0.00 0.00 1.85
658 664 3.382083 AAGGATTTCACCCCGCTTTAT 57.618 42.857 0.00 0.00 0.00 1.40
659 665 4.513406 AAGGATTTCACCCCGCTTTATA 57.487 40.909 0.00 0.00 0.00 0.98
660 666 4.513406 AGGATTTCACCCCGCTTTATAA 57.487 40.909 0.00 0.00 0.00 0.98
661 667 4.862371 AGGATTTCACCCCGCTTTATAAA 58.138 39.130 0.00 0.00 0.00 1.40
662 668 5.454966 AGGATTTCACCCCGCTTTATAAAT 58.545 37.500 0.00 0.00 0.00 1.40
663 669 6.607019 AGGATTTCACCCCGCTTTATAAATA 58.393 36.000 0.00 0.00 0.00 1.40
664 670 7.064229 AGGATTTCACCCCGCTTTATAAATAA 58.936 34.615 0.00 0.00 0.00 1.40
665 671 7.562088 AGGATTTCACCCCGCTTTATAAATAAA 59.438 33.333 0.00 0.00 0.00 1.40
679 685 9.139174 CTTTATAAATAAAGCAAACCACCACAG 57.861 33.333 9.01 0.00 41.69 3.66
680 686 6.909550 ATAAATAAAGCAAACCACCACAGA 57.090 33.333 0.00 0.00 0.00 3.41
681 687 4.584327 AATAAAGCAAACCACCACAGAC 57.416 40.909 0.00 0.00 0.00 3.51
682 688 1.846007 AAAGCAAACCACCACAGACA 58.154 45.000 0.00 0.00 0.00 3.41
683 689 1.102978 AAGCAAACCACCACAGACAC 58.897 50.000 0.00 0.00 0.00 3.67
684 690 0.034574 AGCAAACCACCACAGACACA 60.035 50.000 0.00 0.00 0.00 3.72
685 691 0.814457 GCAAACCACCACAGACACAA 59.186 50.000 0.00 0.00 0.00 3.33
686 692 1.202290 GCAAACCACCACAGACACAAG 60.202 52.381 0.00 0.00 0.00 3.16
687 693 1.405105 CAAACCACCACAGACACAAGG 59.595 52.381 0.00 0.00 0.00 3.61
688 694 0.623723 AACCACCACAGACACAAGGT 59.376 50.000 0.00 0.00 33.91 3.50
689 695 1.502690 ACCACCACAGACACAAGGTA 58.497 50.000 0.00 0.00 32.01 3.08
690 696 2.054799 ACCACCACAGACACAAGGTAT 58.945 47.619 0.00 0.00 32.01 2.73
691 697 2.038557 ACCACCACAGACACAAGGTATC 59.961 50.000 0.00 0.00 32.01 2.24
692 698 2.337583 CACCACAGACACAAGGTATCG 58.662 52.381 0.00 0.00 32.01 2.92
693 699 1.337823 ACCACAGACACAAGGTATCGC 60.338 52.381 0.00 0.00 31.32 4.58
694 700 1.337728 CCACAGACACAAGGTATCGCA 60.338 52.381 0.00 0.00 0.00 5.10
695 701 2.412870 CACAGACACAAGGTATCGCAA 58.587 47.619 0.00 0.00 0.00 4.85
696 702 2.805671 CACAGACACAAGGTATCGCAAA 59.194 45.455 0.00 0.00 0.00 3.68
697 703 3.436704 CACAGACACAAGGTATCGCAAAT 59.563 43.478 0.00 0.00 0.00 2.32
698 704 3.436704 ACAGACACAAGGTATCGCAAATG 59.563 43.478 0.00 0.00 0.00 2.32
699 705 3.436704 CAGACACAAGGTATCGCAAATGT 59.563 43.478 0.00 0.00 0.00 2.71
700 706 3.684788 AGACACAAGGTATCGCAAATGTC 59.315 43.478 0.00 0.00 36.34 3.06
701 707 2.747446 ACACAAGGTATCGCAAATGTCC 59.253 45.455 0.00 0.00 0.00 4.02
702 708 2.746904 CACAAGGTATCGCAAATGTCCA 59.253 45.455 0.00 0.00 0.00 4.02
703 709 2.747446 ACAAGGTATCGCAAATGTCCAC 59.253 45.455 0.00 0.00 0.00 4.02
704 710 2.038387 AGGTATCGCAAATGTCCACC 57.962 50.000 0.00 0.00 0.00 4.61
705 711 1.021968 GGTATCGCAAATGTCCACCC 58.978 55.000 0.00 0.00 0.00 4.61
706 712 1.021968 GTATCGCAAATGTCCACCCC 58.978 55.000 0.00 0.00 0.00 4.95
707 713 0.106918 TATCGCAAATGTCCACCCCC 60.107 55.000 0.00 0.00 0.00 5.40
721 727 2.915079 CCCCCACACACAGTCACA 59.085 61.111 0.00 0.00 0.00 3.58
722 728 1.525995 CCCCCACACACAGTCACAC 60.526 63.158 0.00 0.00 0.00 3.82
723 729 1.525995 CCCCACACACAGTCACACC 60.526 63.158 0.00 0.00 0.00 4.16
724 730 1.223211 CCCACACACAGTCACACCA 59.777 57.895 0.00 0.00 0.00 4.17
725 731 1.095228 CCCACACACAGTCACACCAC 61.095 60.000 0.00 0.00 0.00 4.16
726 732 0.392327 CCACACACAGTCACACCACA 60.392 55.000 0.00 0.00 0.00 4.17
727 733 1.447945 CACACACAGTCACACCACAA 58.552 50.000 0.00 0.00 0.00 3.33
728 734 1.809547 CACACACAGTCACACCACAAA 59.190 47.619 0.00 0.00 0.00 2.83
729 735 2.423185 CACACACAGTCACACCACAAAT 59.577 45.455 0.00 0.00 0.00 2.32
730 736 3.625313 CACACACAGTCACACCACAAATA 59.375 43.478 0.00 0.00 0.00 1.40
731 737 3.876914 ACACACAGTCACACCACAAATAG 59.123 43.478 0.00 0.00 0.00 1.73
732 738 3.876914 CACACAGTCACACCACAAATAGT 59.123 43.478 0.00 0.00 0.00 2.12
733 739 5.053811 CACACAGTCACACCACAAATAGTA 58.946 41.667 0.00 0.00 0.00 1.82
734 740 5.050363 CACACAGTCACACCACAAATAGTAC 60.050 44.000 0.00 0.00 0.00 2.73
735 741 5.053811 CACAGTCACACCACAAATAGTACA 58.946 41.667 0.00 0.00 0.00 2.90
736 742 5.525745 CACAGTCACACCACAAATAGTACAA 59.474 40.000 0.00 0.00 0.00 2.41
737 743 5.758296 ACAGTCACACCACAAATAGTACAAG 59.242 40.000 0.00 0.00 0.00 3.16
738 744 5.989168 CAGTCACACCACAAATAGTACAAGA 59.011 40.000 0.00 0.00 0.00 3.02
739 745 6.146184 CAGTCACACCACAAATAGTACAAGAG 59.854 42.308 0.00 0.00 0.00 2.85
740 746 5.408604 GTCACACCACAAATAGTACAAGAGG 59.591 44.000 0.00 0.00 0.00 3.69
741 747 4.695455 CACACCACAAATAGTACAAGAGGG 59.305 45.833 0.00 0.00 0.00 4.30
742 748 4.349930 ACACCACAAATAGTACAAGAGGGT 59.650 41.667 0.00 0.00 0.00 4.34
743 749 5.163131 ACACCACAAATAGTACAAGAGGGTT 60.163 40.000 0.00 0.00 0.00 4.11
744 750 5.411669 CACCACAAATAGTACAAGAGGGTTC 59.588 44.000 0.00 0.00 0.00 3.62
745 751 5.309806 ACCACAAATAGTACAAGAGGGTTCT 59.690 40.000 0.00 0.00 34.29 3.01
746 752 5.643777 CCACAAATAGTACAAGAGGGTTCTG 59.356 44.000 0.00 0.00 32.79 3.02
747 753 5.122396 CACAAATAGTACAAGAGGGTTCTGC 59.878 44.000 0.00 0.00 32.79 4.26
748 754 5.013183 ACAAATAGTACAAGAGGGTTCTGCT 59.987 40.000 0.00 0.00 32.79 4.24
749 755 4.744795 ATAGTACAAGAGGGTTCTGCTG 57.255 45.455 0.00 0.00 32.79 4.41
750 756 2.609747 AGTACAAGAGGGTTCTGCTGA 58.390 47.619 0.00 0.00 32.79 4.26
751 757 2.564947 AGTACAAGAGGGTTCTGCTGAG 59.435 50.000 0.00 0.00 32.79 3.35
752 758 0.689623 ACAAGAGGGTTCTGCTGAGG 59.310 55.000 0.00 0.00 32.79 3.86
753 759 0.035630 CAAGAGGGTTCTGCTGAGGG 60.036 60.000 0.00 0.00 32.79 4.30
754 760 1.846712 AAGAGGGTTCTGCTGAGGGC 61.847 60.000 0.00 0.00 42.22 5.19
763 769 4.481195 GCTGAGGGCACAGTTCAA 57.519 55.556 11.37 0.00 41.35 2.69
764 770 1.952263 GCTGAGGGCACAGTTCAAC 59.048 57.895 11.37 0.00 41.35 3.18
765 771 0.819259 GCTGAGGGCACAGTTCAACA 60.819 55.000 11.37 0.00 41.35 3.33
766 772 1.679139 CTGAGGGCACAGTTCAACAA 58.321 50.000 0.00 0.00 33.73 2.83
767 773 1.605710 CTGAGGGCACAGTTCAACAAG 59.394 52.381 0.00 0.00 33.73 3.16
768 774 0.312102 GAGGGCACAGTTCAACAAGC 59.688 55.000 0.00 0.00 0.00 4.01
769 775 1.109323 AGGGCACAGTTCAACAAGCC 61.109 55.000 8.88 8.88 41.29 4.35
770 776 1.363807 GGCACAGTTCAACAAGCCC 59.636 57.895 6.64 0.00 36.17 5.19
771 777 1.109323 GGCACAGTTCAACAAGCCCT 61.109 55.000 6.64 0.00 36.17 5.19
772 778 0.031178 GCACAGTTCAACAAGCCCTG 59.969 55.000 0.00 0.00 0.00 4.45
773 779 1.679139 CACAGTTCAACAAGCCCTGA 58.321 50.000 0.00 0.00 0.00 3.86
774 780 2.023673 CACAGTTCAACAAGCCCTGAA 58.976 47.619 0.00 0.00 0.00 3.02
775 781 2.426738 CACAGTTCAACAAGCCCTGAAA 59.573 45.455 0.00 0.00 33.52 2.69
776 782 3.096092 ACAGTTCAACAAGCCCTGAAAA 58.904 40.909 0.00 0.00 33.52 2.29
777 783 3.119137 ACAGTTCAACAAGCCCTGAAAAC 60.119 43.478 0.00 0.00 33.52 2.43
778 784 2.099098 AGTTCAACAAGCCCTGAAAACG 59.901 45.455 0.00 0.00 33.52 3.60
779 785 2.045561 TCAACAAGCCCTGAAAACGA 57.954 45.000 0.00 0.00 0.00 3.85
780 786 2.370349 TCAACAAGCCCTGAAAACGAA 58.630 42.857 0.00 0.00 0.00 3.85
781 787 2.755655 TCAACAAGCCCTGAAAACGAAA 59.244 40.909 0.00 0.00 0.00 3.46
782 788 3.193691 TCAACAAGCCCTGAAAACGAAAA 59.806 39.130 0.00 0.00 0.00 2.29
783 789 3.159353 ACAAGCCCTGAAAACGAAAAC 57.841 42.857 0.00 0.00 0.00 2.43
784 790 2.494073 ACAAGCCCTGAAAACGAAAACA 59.506 40.909 0.00 0.00 0.00 2.83
785 791 3.056465 ACAAGCCCTGAAAACGAAAACAA 60.056 39.130 0.00 0.00 0.00 2.83
786 792 3.878160 AGCCCTGAAAACGAAAACAAA 57.122 38.095 0.00 0.00 0.00 2.83
787 793 3.780902 AGCCCTGAAAACGAAAACAAAG 58.219 40.909 0.00 0.00 0.00 2.77
788 794 2.863740 GCCCTGAAAACGAAAACAAAGG 59.136 45.455 0.00 0.00 0.00 3.11
789 795 2.863740 CCCTGAAAACGAAAACAAAGGC 59.136 45.455 0.00 0.00 0.00 4.35
790 796 2.533942 CCTGAAAACGAAAACAAAGGCG 59.466 45.455 0.00 0.00 0.00 5.52
791 797 2.531206 TGAAAACGAAAACAAAGGCGG 58.469 42.857 0.00 0.00 0.00 6.13
792 798 1.855978 GAAAACGAAAACAAAGGCGGG 59.144 47.619 0.00 0.00 0.00 6.13
793 799 1.104630 AAACGAAAACAAAGGCGGGA 58.895 45.000 0.00 0.00 0.00 5.14
794 800 1.104630 AACGAAAACAAAGGCGGGAA 58.895 45.000 0.00 0.00 0.00 3.97
795 801 0.382873 ACGAAAACAAAGGCGGGAAC 59.617 50.000 0.00 0.00 0.00 3.62
808 814 4.043200 GGAACCCGCAACAGCAGC 62.043 66.667 0.00 0.00 0.00 5.25
809 815 2.980233 GAACCCGCAACAGCAGCT 60.980 61.111 0.00 0.00 0.00 4.24
810 816 1.671054 GAACCCGCAACAGCAGCTA 60.671 57.895 0.00 0.00 0.00 3.32
811 817 1.228124 AACCCGCAACAGCAGCTAA 60.228 52.632 0.00 0.00 0.00 3.09
812 818 1.237285 AACCCGCAACAGCAGCTAAG 61.237 55.000 0.00 0.00 0.00 2.18
813 819 1.375908 CCCGCAACAGCAGCTAAGA 60.376 57.895 0.00 0.00 0.00 2.10
814 820 0.955428 CCCGCAACAGCAGCTAAGAA 60.955 55.000 0.00 0.00 0.00 2.52
815 821 0.445436 CCGCAACAGCAGCTAAGAAG 59.555 55.000 0.00 0.00 0.00 2.85
826 832 2.535012 GCTAAGAAGCTAATCCGGCT 57.465 50.000 0.00 0.00 45.85 5.52
827 833 2.409012 GCTAAGAAGCTAATCCGGCTC 58.591 52.381 0.00 0.00 45.85 4.70
828 834 2.036604 GCTAAGAAGCTAATCCGGCTCT 59.963 50.000 0.00 0.00 45.85 4.09
829 835 2.611225 AAGAAGCTAATCCGGCTCTG 57.389 50.000 0.00 0.00 39.30 3.35
830 836 0.755686 AGAAGCTAATCCGGCTCTGG 59.244 55.000 0.00 0.00 39.30 3.86
831 837 0.466124 GAAGCTAATCCGGCTCTGGT 59.534 55.000 0.00 0.00 39.30 4.00
832 838 0.179000 AAGCTAATCCGGCTCTGGTG 59.821 55.000 0.00 0.00 39.30 4.17
833 839 1.227674 GCTAATCCGGCTCTGGTGG 60.228 63.158 0.00 0.00 0.00 4.61
834 840 1.972660 GCTAATCCGGCTCTGGTGGT 61.973 60.000 0.00 0.00 0.00 4.16
835 841 0.179073 CTAATCCGGCTCTGGTGGTG 60.179 60.000 0.00 0.00 0.00 4.17
836 842 1.622607 TAATCCGGCTCTGGTGGTGG 61.623 60.000 0.00 0.00 0.00 4.61
837 843 3.924013 ATCCGGCTCTGGTGGTGGA 62.924 63.158 0.00 0.00 0.00 4.02
838 844 4.087892 CCGGCTCTGGTGGTGGAG 62.088 72.222 0.00 0.00 0.00 3.86
839 845 4.087892 CGGCTCTGGTGGTGGAGG 62.088 72.222 0.00 0.00 0.00 4.30
840 846 2.607750 GGCTCTGGTGGTGGAGGA 60.608 66.667 0.00 0.00 0.00 3.71
841 847 2.664081 GGCTCTGGTGGTGGAGGAG 61.664 68.421 0.00 0.00 0.00 3.69
842 848 2.664081 GCTCTGGTGGTGGAGGAGG 61.664 68.421 0.00 0.00 0.00 4.30
843 849 1.079256 CTCTGGTGGTGGAGGAGGA 59.921 63.158 0.00 0.00 0.00 3.71
844 850 0.545309 CTCTGGTGGTGGAGGAGGAA 60.545 60.000 0.00 0.00 0.00 3.36
845 851 0.545309 TCTGGTGGTGGAGGAGGAAG 60.545 60.000 0.00 0.00 0.00 3.46
846 852 2.190488 CTGGTGGTGGAGGAGGAAGC 62.190 65.000 0.00 0.00 0.00 3.86
847 853 2.266055 GTGGTGGAGGAGGAAGCG 59.734 66.667 0.00 0.00 0.00 4.68
848 854 3.003173 TGGTGGAGGAGGAAGCGG 61.003 66.667 0.00 0.00 0.00 5.52
849 855 4.475135 GGTGGAGGAGGAAGCGGC 62.475 72.222 0.00 0.00 0.00 6.53
850 856 4.821589 GTGGAGGAGGAAGCGGCG 62.822 72.222 0.51 0.51 0.00 6.46
876 882 4.637489 CGGAGAGCCATCGAGCGG 62.637 72.222 0.00 0.00 38.01 5.52
877 883 3.219928 GGAGAGCCATCGAGCGGA 61.220 66.667 7.83 0.00 38.01 5.54
878 884 2.334653 GAGAGCCATCGAGCGGAG 59.665 66.667 7.83 0.00 38.01 4.63
879 885 3.206211 GAGAGCCATCGAGCGGAGG 62.206 68.421 7.83 0.00 38.01 4.30
880 886 3.532155 GAGCCATCGAGCGGAGGT 61.532 66.667 7.83 0.00 46.54 3.85
889 895 2.831742 AGCGGAGGTCGGCGATAA 60.832 61.111 14.79 0.00 45.36 1.75
890 896 2.201022 AGCGGAGGTCGGCGATAAT 61.201 57.895 14.79 1.26 45.36 1.28
891 897 0.892358 AGCGGAGGTCGGCGATAATA 60.892 55.000 14.79 0.00 45.36 0.98
892 898 0.038892 GCGGAGGTCGGCGATAATAA 60.039 55.000 14.79 0.00 39.69 1.40
893 899 1.403780 GCGGAGGTCGGCGATAATAAT 60.404 52.381 14.79 0.00 39.69 1.28
894 900 2.259618 CGGAGGTCGGCGATAATAATG 58.740 52.381 14.79 0.00 34.75 1.90
895 901 2.352421 CGGAGGTCGGCGATAATAATGT 60.352 50.000 14.79 0.00 34.75 2.71
896 902 3.660865 GGAGGTCGGCGATAATAATGTT 58.339 45.455 14.79 0.00 0.00 2.71
897 903 3.432252 GGAGGTCGGCGATAATAATGTTG 59.568 47.826 14.79 0.00 0.00 3.33
898 904 4.304110 GAGGTCGGCGATAATAATGTTGA 58.696 43.478 14.79 0.00 0.00 3.18
899 905 4.894784 AGGTCGGCGATAATAATGTTGAT 58.105 39.130 14.79 0.00 0.00 2.57
900 906 4.690748 AGGTCGGCGATAATAATGTTGATG 59.309 41.667 14.79 0.00 0.00 3.07
901 907 4.142902 GGTCGGCGATAATAATGTTGATGG 60.143 45.833 14.79 0.00 0.00 3.51
902 908 3.435327 TCGGCGATAATAATGTTGATGGC 59.565 43.478 4.99 0.00 0.00 4.40
903 909 3.724716 CGGCGATAATAATGTTGATGGCG 60.725 47.826 0.00 0.00 36.58 5.69
904 910 3.188460 GGCGATAATAATGTTGATGGCGT 59.812 43.478 0.00 0.00 0.00 5.68
905 911 4.394795 GCGATAATAATGTTGATGGCGTC 58.605 43.478 0.00 0.00 0.00 5.19
906 912 4.669197 GCGATAATAATGTTGATGGCGTCC 60.669 45.833 3.88 0.00 0.00 4.79
907 913 4.142902 CGATAATAATGTTGATGGCGTCCC 60.143 45.833 3.88 0.00 0.00 4.46
908 914 1.593196 ATAATGTTGATGGCGTCCCG 58.407 50.000 3.88 0.00 0.00 5.14
909 915 0.462937 TAATGTTGATGGCGTCCCGG 60.463 55.000 3.88 0.00 0.00 5.73
910 916 2.478335 AATGTTGATGGCGTCCCGGT 62.478 55.000 0.00 0.00 0.00 5.28
911 917 2.818274 GTTGATGGCGTCCCGGTC 60.818 66.667 0.00 0.00 0.00 4.79
912 918 4.090588 TTGATGGCGTCCCGGTCC 62.091 66.667 0.00 0.00 0.00 4.46
914 920 4.530857 GATGGCGTCCCGGTCCTG 62.531 72.222 0.00 0.00 0.00 3.86
925 931 3.081409 GGTCCTGGAGGCGGCTAA 61.081 66.667 13.24 1.94 34.44 3.09
926 932 2.501610 GTCCTGGAGGCGGCTAAG 59.498 66.667 13.24 12.93 34.44 2.18
927 933 3.470888 TCCTGGAGGCGGCTAAGC 61.471 66.667 13.24 0.00 34.44 3.09
928 934 4.899239 CCTGGAGGCGGCTAAGCG 62.899 72.222 13.24 3.58 38.18 4.68
929 935 4.148825 CTGGAGGCGGCTAAGCGT 62.149 66.667 13.24 0.00 38.18 5.07
937 943 4.143333 GGCTAAGCGTCCGCCAGA 62.143 66.667 8.23 0.00 43.25 3.86
938 944 2.583593 GCTAAGCGTCCGCCAGAG 60.584 66.667 8.23 4.54 43.17 3.35
939 945 2.583593 CTAAGCGTCCGCCAGAGC 60.584 66.667 8.23 0.00 43.17 4.09
940 946 3.068691 TAAGCGTCCGCCAGAGCT 61.069 61.111 8.23 0.00 43.17 4.09
941 947 3.356639 TAAGCGTCCGCCAGAGCTG 62.357 63.158 8.23 0.00 43.17 4.24
945 951 3.123620 GTCCGCCAGAGCTGCAAG 61.124 66.667 1.02 0.00 36.60 4.01
946 952 3.630013 TCCGCCAGAGCTGCAAGT 61.630 61.111 1.02 0.00 36.60 3.16
947 953 2.265739 CCGCCAGAGCTGCAAGTA 59.734 61.111 1.02 0.00 36.60 2.24
948 954 2.103042 CCGCCAGAGCTGCAAGTAC 61.103 63.158 1.02 0.00 36.60 2.73
949 955 2.103042 CGCCAGAGCTGCAAGTACC 61.103 63.158 1.02 0.00 36.60 3.34
950 956 1.746991 GCCAGAGCTGCAAGTACCC 60.747 63.158 1.02 0.00 35.30 3.69
951 957 1.679311 CCAGAGCTGCAAGTACCCA 59.321 57.895 1.02 0.00 35.30 4.51
952 958 0.674895 CCAGAGCTGCAAGTACCCAC 60.675 60.000 1.02 0.00 35.30 4.61
953 959 0.035317 CAGAGCTGCAAGTACCCACA 59.965 55.000 1.02 0.00 35.30 4.17
954 960 0.035458 AGAGCTGCAAGTACCCACAC 59.965 55.000 1.02 0.00 35.30 3.82
955 961 0.250295 GAGCTGCAAGTACCCACACA 60.250 55.000 1.02 0.00 35.30 3.72
956 962 0.401738 AGCTGCAAGTACCCACACAT 59.598 50.000 1.02 0.00 35.30 3.21
957 963 1.202927 AGCTGCAAGTACCCACACATT 60.203 47.619 1.02 0.00 35.30 2.71
958 964 1.613437 GCTGCAAGTACCCACACATTT 59.387 47.619 0.00 0.00 35.30 2.32
959 965 2.035832 GCTGCAAGTACCCACACATTTT 59.964 45.455 0.00 0.00 35.30 1.82
960 966 3.641648 CTGCAAGTACCCACACATTTTG 58.358 45.455 0.00 0.00 0.00 2.44
961 967 3.027412 TGCAAGTACCCACACATTTTGT 58.973 40.909 0.00 0.00 39.97 2.83
962 968 4.207955 TGCAAGTACCCACACATTTTGTA 58.792 39.130 0.00 0.00 35.67 2.41
963 969 4.645136 TGCAAGTACCCACACATTTTGTAA 59.355 37.500 0.00 0.00 35.67 2.41
964 970 5.127194 TGCAAGTACCCACACATTTTGTAAA 59.873 36.000 0.00 0.00 35.67 2.01
965 971 5.460748 GCAAGTACCCACACATTTTGTAAAC 59.539 40.000 0.00 0.00 35.67 2.01
966 972 6.565234 CAAGTACCCACACATTTTGTAAACA 58.435 36.000 0.00 0.00 35.67 2.83
967 973 6.385649 AGTACCCACACATTTTGTAAACAG 57.614 37.500 0.00 0.00 35.67 3.16
968 974 4.053469 ACCCACACATTTTGTAAACAGC 57.947 40.909 0.00 0.00 35.67 4.40
969 975 3.049206 CCCACACATTTTGTAAACAGCG 58.951 45.455 0.00 0.00 35.67 5.18
970 976 3.490078 CCCACACATTTTGTAAACAGCGT 60.490 43.478 0.00 0.00 35.67 5.07
971 977 3.728718 CCACACATTTTGTAAACAGCGTC 59.271 43.478 0.00 0.00 35.67 5.19
972 978 4.346970 CACACATTTTGTAAACAGCGTCA 58.653 39.130 0.00 0.00 35.67 4.35
973 979 4.437495 CACACATTTTGTAAACAGCGTCAG 59.563 41.667 0.00 0.00 35.67 3.51
974 980 4.095782 ACACATTTTGTAAACAGCGTCAGT 59.904 37.500 0.00 0.00 36.32 3.41
975 981 4.437495 CACATTTTGTAAACAGCGTCAGTG 59.563 41.667 0.00 0.00 0.00 3.66
976 982 3.684103 TTTTGTAAACAGCGTCAGTGG 57.316 42.857 0.00 0.00 0.00 4.00
977 983 0.941542 TTGTAAACAGCGTCAGTGGC 59.058 50.000 0.00 0.00 0.00 5.01
978 984 0.179070 TGTAAACAGCGTCAGTGGCA 60.179 50.000 0.00 0.00 0.00 4.92
979 985 0.234884 GTAAACAGCGTCAGTGGCAC 59.765 55.000 10.29 10.29 0.00 5.01
980 986 0.179070 TAAACAGCGTCAGTGGCACA 60.179 50.000 21.41 0.00 0.00 4.57
981 987 0.819259 AAACAGCGTCAGTGGCACAT 60.819 50.000 21.41 1.78 44.52 3.21
982 988 1.230635 AACAGCGTCAGTGGCACATC 61.231 55.000 21.41 8.41 44.52 3.06
983 989 2.433145 AGCGTCAGTGGCACATCG 60.433 61.111 21.41 19.99 44.52 3.84
984 990 2.432456 GCGTCAGTGGCACATCGA 60.432 61.111 21.41 10.30 44.52 3.59
985 991 2.027073 GCGTCAGTGGCACATCGAA 61.027 57.895 21.41 0.00 44.52 3.71
986 992 1.959899 GCGTCAGTGGCACATCGAAG 61.960 60.000 21.41 15.32 44.52 3.79
987 993 0.388520 CGTCAGTGGCACATCGAAGA 60.389 55.000 21.41 4.73 44.52 2.87
988 994 1.354040 GTCAGTGGCACATCGAAGAG 58.646 55.000 21.41 0.00 44.52 2.85
990 996 0.247460 CAGTGGCACATCGAAGAGGA 59.753 55.000 21.41 0.00 43.16 3.71
991 997 0.976641 AGTGGCACATCGAAGAGGAA 59.023 50.000 21.41 0.00 43.16 3.36
992 998 1.079503 GTGGCACATCGAAGAGGAAC 58.920 55.000 13.86 0.00 43.16 3.62
993 999 0.976641 TGGCACATCGAAGAGGAACT 59.023 50.000 0.00 0.00 43.16 3.01
1005 1011 2.671145 AGGAACTCGCTGGATGACA 58.329 52.632 0.00 0.00 0.00 3.58
1006 1012 0.976641 AGGAACTCGCTGGATGACAA 59.023 50.000 0.00 0.00 0.00 3.18
1007 1013 1.066573 AGGAACTCGCTGGATGACAAG 60.067 52.381 0.00 0.00 0.00 3.16
1008 1014 0.723981 GAACTCGCTGGATGACAAGC 59.276 55.000 0.00 0.00 0.00 4.01
1009 1015 0.322975 AACTCGCTGGATGACAAGCT 59.677 50.000 0.00 0.00 0.00 3.74
1010 1016 0.322975 ACTCGCTGGATGACAAGCTT 59.677 50.000 0.00 0.00 0.00 3.74
1011 1017 1.550524 ACTCGCTGGATGACAAGCTTA 59.449 47.619 0.00 0.00 0.00 3.09
1012 1018 2.169352 ACTCGCTGGATGACAAGCTTAT 59.831 45.455 0.00 0.00 0.00 1.73
1013 1019 2.799412 CTCGCTGGATGACAAGCTTATC 59.201 50.000 0.00 0.00 0.00 1.75
1014 1020 2.168313 TCGCTGGATGACAAGCTTATCA 59.832 45.455 10.37 10.37 0.00 2.15
1015 1021 3.136763 CGCTGGATGACAAGCTTATCAT 58.863 45.455 19.93 19.93 38.28 2.45
1058 1064 7.461749 ACAACATATCAGAGGAAGAAGGAAAA 58.538 34.615 0.00 0.00 0.00 2.29
1083 1089 5.105106 GGAAACCAAACAGGAAGAAGGAAAA 60.105 40.000 0.00 0.00 41.22 2.29
1262 1274 5.240403 GCAAAGAATCTTGTCCAGTTCTCTT 59.760 40.000 0.00 0.00 31.01 2.85
1263 1275 6.567511 GCAAAGAATCTTGTCCAGTTCTCTTC 60.568 42.308 0.00 0.00 31.01 2.87
1264 1276 6.432403 AAGAATCTTGTCCAGTTCTCTTCT 57.568 37.500 0.00 0.00 31.01 2.85
1265 1277 6.432403 AGAATCTTGTCCAGTTCTCTTCTT 57.568 37.500 0.00 0.00 0.00 2.52
1266 1278 6.463360 AGAATCTTGTCCAGTTCTCTTCTTC 58.537 40.000 0.00 0.00 0.00 2.87
1267 1279 6.269769 AGAATCTTGTCCAGTTCTCTTCTTCT 59.730 38.462 0.00 0.00 0.00 2.85
1292 1304 3.420893 TCAATGAAATGAGCTTCGGGTT 58.579 40.909 0.00 0.00 0.00 4.11
1328 1340 3.848975 CCCAGCTCTTTATATCCCATCCT 59.151 47.826 0.00 0.00 0.00 3.24
1367 1379 0.036306 GACACACGGGTTCCAAGGAT 59.964 55.000 0.00 0.00 0.00 3.24
1429 1442 1.380403 CGTGCGTCCTCCTCATCTCT 61.380 60.000 0.00 0.00 0.00 3.10
1617 1668 1.234821 TTCGGATCACCACAACAAGC 58.765 50.000 0.00 0.00 35.59 4.01
1754 1810 2.722094 TCGCAAATGGTATTTCAGCCT 58.278 42.857 0.00 0.00 0.00 4.58
1831 1887 2.747460 TCACGGATGGCTTGCTGC 60.747 61.111 0.00 0.00 41.94 5.25
1923 1984 1.133790 GGGATGCTTGAGAATGTGCAC 59.866 52.381 10.75 10.75 38.29 4.57
1950 2011 1.299850 CATCCATGGCATTGCGCTG 60.300 57.895 9.73 0.00 41.91 5.18
2001 2062 1.001974 GCATACGGGGCTGATGATGTA 59.998 52.381 0.00 0.00 0.00 2.29
2215 2324 3.450457 TGCTGGTGTTCACCAAGAAAATT 59.550 39.130 22.41 0.00 39.61 1.82
2228 2337 4.093850 CCAAGAAAATTATGGCAAGCAAGC 59.906 41.667 0.00 0.00 0.00 4.01
2265 2374 1.970114 CTTGTGTGGCAGGCAGAGG 60.970 63.158 0.00 0.00 0.00 3.69
2310 2422 1.963515 GCCAACAAGGGTGTCAAGAAT 59.036 47.619 0.00 0.00 36.80 2.40
2437 2549 7.576403 TGATGATCCTCAACCTATCATTTCAA 58.424 34.615 0.00 0.00 39.76 2.69
2610 2803 3.141398 CAGCCGTATGCATACCAAAGAT 58.859 45.455 27.08 12.24 44.83 2.40
2863 3065 5.121454 GTCTCTTTCGATTTCAGTGCAGATT 59.879 40.000 0.00 0.00 0.00 2.40
2871 3073 1.210931 CAGTGCAGATTGGTTGGCG 59.789 57.895 0.00 0.00 0.00 5.69
2915 3117 2.959507 AGTGTTGTTGGTGAAAAGGC 57.040 45.000 0.00 0.00 0.00 4.35
3288 3493 6.228258 TCTTGCAACTAAAACTGTAGGTAGG 58.772 40.000 0.00 0.00 0.00 3.18
3360 3565 3.303791 GCAAAGAGTGGGAACTACAAACG 60.304 47.826 0.00 0.00 0.00 3.60
3516 3721 5.758784 GTGGATAGGACTAGGTATTTTGCAC 59.241 44.000 0.00 0.00 0.00 4.57
3591 3796 4.939271 AGTTGGTCAATTACGGGTTTTTG 58.061 39.130 0.00 0.00 0.00 2.44
3758 3966 8.721478 ACGTCATTTATCCATAATTGTAGATGC 58.279 33.333 0.00 0.00 0.00 3.91
4047 4255 1.967319 ACACAGGCAACATCGACTTT 58.033 45.000 0.00 0.00 41.41 2.66
4124 4332 3.226346 TGTCCCTGTTTCGATAAGACG 57.774 47.619 0.00 0.00 0.00 4.18
4128 4336 5.105635 TGTCCCTGTTTCGATAAGACGTATT 60.106 40.000 0.00 0.00 34.70 1.89
4167 6200 4.871513 TGCGTAATATGCCTCTAGTTCTG 58.128 43.478 1.60 0.00 0.00 3.02
4551 6633 5.634859 CCTCTTGGTCAAAAATTTGGAATCG 59.365 40.000 6.08 0.00 38.66 3.34
4626 6708 0.037326 TGGTTGATGAGCTCCGTGAC 60.037 55.000 12.15 5.11 0.00 3.67
4869 6968 2.166270 GCAAGAAGGAGCGAACCTG 58.834 57.895 1.75 0.00 40.49 4.00
4870 6969 0.320771 GCAAGAAGGAGCGAACCTGA 60.321 55.000 1.75 0.00 40.49 3.86
4871 6970 1.719600 CAAGAAGGAGCGAACCTGAG 58.280 55.000 1.75 0.00 40.49 3.35
4986 7085 8.370940 TGCTCTATTAAGATAGAACAATCAGGG 58.629 37.037 0.00 0.00 42.71 4.45
5008 7107 4.153475 GGTCAAATTTTCAGCTACGCACTA 59.847 41.667 0.00 0.00 0.00 2.74
5077 7182 0.950116 GGATGGTGCAGATAGCTTGC 59.050 55.000 1.77 1.77 45.94 4.01
5112 7217 5.689383 TGTCTTTCTGTTATTTGAGTGGC 57.311 39.130 0.00 0.00 0.00 5.01
5289 7394 3.072944 AGAACTCTGCATTTCTGACAGC 58.927 45.455 0.00 0.00 30.65 4.40
5419 7626 1.281287 AGAGTGGATCACAGCAGCAAT 59.719 47.619 0.00 0.00 36.74 3.56
5737 7965 1.553248 TGGACCTCACAAACCTATCCG 59.447 52.381 0.00 0.00 0.00 4.18
5743 7971 2.496070 CTCACAAACCTATCCGACCTGA 59.504 50.000 0.00 0.00 0.00 3.86
5945 8197 1.984570 TGCTTCTCACCTCCCTCCG 60.985 63.158 0.00 0.00 0.00 4.63
6008 8260 3.195610 CCTGCAGGTCTACATACACTTGA 59.804 47.826 25.53 0.00 0.00 3.02
6049 8301 0.982852 TCGTTCATGCCCATCCCTCT 60.983 55.000 0.00 0.00 0.00 3.69
6050 8302 0.816825 CGTTCATGCCCATCCCTCTG 60.817 60.000 0.00 0.00 0.00 3.35
6096 8355 7.633789 TCCCTAGTTCTTTGCAGAAATTAGAT 58.366 34.615 8.13 0.00 40.90 1.98
6226 8485 1.831652 CGGCCTCCCAACTTCTCTGT 61.832 60.000 0.00 0.00 0.00 3.41
6497 9290 4.884668 AAACACGTCCTTATCCTCTTCA 57.115 40.909 0.00 0.00 0.00 3.02
6711 9512 7.442969 CCTCGTAGAAGTCTCTCTGTATACAAT 59.557 40.741 7.06 0.00 34.09 2.71
6737 9538 2.165437 AGTTCGTTCTCAGGCTCTCATC 59.835 50.000 0.00 0.00 0.00 2.92
6788 9589 6.094193 TCAGTCTGTATCATCCATCATGTC 57.906 41.667 0.00 0.00 33.66 3.06
6802 9603 3.469008 TCATGTCCGTAATCATCCCAC 57.531 47.619 0.00 0.00 0.00 4.61
6819 9620 2.560981 CCCACAACCCCAATAACACTTC 59.439 50.000 0.00 0.00 0.00 3.01
6895 9696 8.528044 TTTGTTTGGTTCTTAGGAATTACTGT 57.472 30.769 0.00 0.00 33.71 3.55
6917 9718 7.095607 ACTGTCGTTTCATCTGAACTGAATAAC 60.096 37.037 0.00 0.00 32.94 1.89
7072 10204 3.244422 TGCGTAATCATCCCATAACTCCC 60.244 47.826 0.00 0.00 0.00 4.30
7084 10216 4.944930 CCCATAACTCCCGTAACAATTTCA 59.055 41.667 0.00 0.00 0.00 2.69
7089 10221 2.096248 TCCCGTAACAATTTCATGCCC 58.904 47.619 0.00 0.00 0.00 5.36
7090 10222 2.099405 CCCGTAACAATTTCATGCCCT 58.901 47.619 0.00 0.00 0.00 5.19
7143 10275 2.158740 TCCCCTTCATGTGAACAACGAA 60.159 45.455 0.00 0.00 0.00 3.85
7242 10403 1.388547 TCGGTGCAGCAAGTTTCTTT 58.611 45.000 17.33 0.00 0.00 2.52
7243 10404 1.333619 TCGGTGCAGCAAGTTTCTTTC 59.666 47.619 17.33 0.00 0.00 2.62
7244 10405 1.334869 CGGTGCAGCAAGTTTCTTTCT 59.665 47.619 17.33 0.00 0.00 2.52
7245 10406 2.223572 CGGTGCAGCAAGTTTCTTTCTT 60.224 45.455 17.33 0.00 0.00 2.52
7274 10447 5.983118 CCAATCCAAGGTAAACAAAACACTC 59.017 40.000 0.00 0.00 0.00 3.51
7356 10541 6.610075 ACCTCATAAACATCAAAGCCATTT 57.390 33.333 0.00 0.00 0.00 2.32
7376 10561 6.757478 CCATTTACCTTTTGTTTGGTTTACGT 59.243 34.615 0.00 0.00 37.74 3.57
7377 10562 7.043258 CCATTTACCTTTTGTTTGGTTTACGTC 60.043 37.037 0.00 0.00 37.74 4.34
7382 10567 6.311690 ACCTTTTGTTTGGTTTACGTCAATTG 59.688 34.615 0.00 0.00 31.62 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 4.465886 TCCTGCAGCAAGTTACCTAAAAA 58.534 39.130 8.66 0.00 0.00 1.94
40 41 2.290071 GGTTCCTGCAGCAAGTTACCTA 60.290 50.000 8.66 0.00 0.00 3.08
101 102 1.443194 CAACAGGTGCTGCGATTGC 60.443 57.895 0.00 0.00 43.20 3.56
118 119 4.826274 AACCTCAAATAGCTCTAGTGCA 57.174 40.909 18.36 5.62 34.99 4.57
119 120 5.908341 ACTAACCTCAAATAGCTCTAGTGC 58.092 41.667 8.76 8.76 0.00 4.40
121 122 7.782644 AGATGACTAACCTCAAATAGCTCTAGT 59.217 37.037 0.00 0.00 0.00 2.57
122 123 8.081633 CAGATGACTAACCTCAAATAGCTCTAG 58.918 40.741 0.00 0.00 0.00 2.43
123 124 7.470702 GCAGATGACTAACCTCAAATAGCTCTA 60.471 40.741 0.00 0.00 0.00 2.43
191 192 5.708877 ACTACCTACTTGACACTGTTCTC 57.291 43.478 0.00 0.00 0.00 2.87
223 224 7.337938 TCTGGCAAATTGTCAATCTATAGTGA 58.662 34.615 0.79 0.00 28.17 3.41
298 299 7.432545 GCTTTACACTTCAGTTTCCTTTCTTTC 59.567 37.037 0.00 0.00 0.00 2.62
344 346 1.925229 TCTTTGTTTGTTGCTGCAGC 58.075 45.000 31.89 31.89 42.50 5.25
365 367 2.105477 AGTGAAGAGGAGCAAAAGCAGA 59.895 45.455 0.00 0.00 0.00 4.26
367 369 2.645838 AGTGAAGAGGAGCAAAAGCA 57.354 45.000 0.00 0.00 0.00 3.91
370 372 6.357367 AGAAAAGTAGTGAAGAGGAGCAAAA 58.643 36.000 0.00 0.00 0.00 2.44
381 383 3.942748 ACGGTGCAAAGAAAAGTAGTGAA 59.057 39.130 0.00 0.00 0.00 3.18
391 393 5.218885 CACAATTATGAACGGTGCAAAGAA 58.781 37.500 0.00 0.00 0.00 2.52
401 403 4.864916 ACTAGCTGCACAATTATGAACG 57.135 40.909 1.02 0.00 0.00 3.95
403 405 6.206438 TGACAAACTAGCTGCACAATTATGAA 59.794 34.615 1.02 0.00 0.00 2.57
404 406 5.704978 TGACAAACTAGCTGCACAATTATGA 59.295 36.000 1.02 0.00 0.00 2.15
413 415 2.189594 AGCATGACAAACTAGCTGCA 57.810 45.000 1.02 0.00 33.67 4.41
414 416 3.565905 AAAGCATGACAAACTAGCTGC 57.434 42.857 0.00 0.00 35.42 5.25
421 423 8.009409 GCAATTTACCTAAAAAGCATGACAAAC 58.991 33.333 0.00 0.00 32.68 2.93
429 431 5.229423 CAGCAGCAATTTACCTAAAAAGCA 58.771 37.500 0.00 0.00 33.94 3.91
443 445 5.545723 AGATATAGTAGGTTCCAGCAGCAAT 59.454 40.000 0.00 0.00 0.00 3.56
444 446 4.901849 AGATATAGTAGGTTCCAGCAGCAA 59.098 41.667 0.00 0.00 0.00 3.91
447 449 4.526262 AGCAGATATAGTAGGTTCCAGCAG 59.474 45.833 0.00 0.00 0.00 4.24
451 453 5.454966 TCACAGCAGATATAGTAGGTTCCA 58.545 41.667 0.00 0.00 0.00 3.53
464 466 5.991933 ATCTAATACCGATCACAGCAGAT 57.008 39.130 0.00 0.00 0.00 2.90
467 469 5.509670 CCAGAATCTAATACCGATCACAGCA 60.510 44.000 0.00 0.00 0.00 4.41
468 470 4.926238 CCAGAATCTAATACCGATCACAGC 59.074 45.833 0.00 0.00 0.00 4.40
482 484 3.492656 GCGATTGCACTACCCAGAATCTA 60.493 47.826 0.00 0.00 42.15 1.98
502 504 1.959899 CTAAAGCGACAGGTGCTGCG 61.960 60.000 0.00 0.00 43.14 5.18
526 528 3.241067 TGCGGATAACTAACCTCACAC 57.759 47.619 0.00 0.00 0.00 3.82
528 530 3.793559 ACATGCGGATAACTAACCTCAC 58.206 45.455 0.00 0.00 0.00 3.51
537 539 3.262420 ACACTTGAGACATGCGGATAAC 58.738 45.455 0.00 0.00 0.00 1.89
543 545 3.838120 TCTCTTACACTTGAGACATGCG 58.162 45.455 0.00 0.00 34.77 4.73
604 610 2.169832 AATGCGTGACAAGTACTGCT 57.830 45.000 0.00 0.00 0.00 4.24
615 621 4.577834 TTCGGTGATCTATAATGCGTGA 57.422 40.909 0.00 0.00 0.00 4.35
616 622 5.651172 TTTTCGGTGATCTATAATGCGTG 57.349 39.130 0.00 0.00 0.00 5.34
617 623 5.236478 CCTTTTTCGGTGATCTATAATGCGT 59.764 40.000 0.00 0.00 0.00 5.24
618 624 5.465390 TCCTTTTTCGGTGATCTATAATGCG 59.535 40.000 0.00 0.00 0.00 4.73
619 625 6.861065 TCCTTTTTCGGTGATCTATAATGC 57.139 37.500 0.00 0.00 0.00 3.56
620 626 9.884465 GAAATCCTTTTTCGGTGATCTATAATG 57.116 33.333 0.00 0.00 0.00 1.90
621 627 9.627123 TGAAATCCTTTTTCGGTGATCTATAAT 57.373 29.630 0.00 0.00 0.00 1.28
622 628 8.889717 GTGAAATCCTTTTTCGGTGATCTATAA 58.110 33.333 0.00 0.00 0.00 0.98
623 629 7.497909 GGTGAAATCCTTTTTCGGTGATCTATA 59.502 37.037 0.00 0.00 0.00 1.31
624 630 6.318900 GGTGAAATCCTTTTTCGGTGATCTAT 59.681 38.462 0.00 0.00 0.00 1.98
625 631 5.646360 GGTGAAATCCTTTTTCGGTGATCTA 59.354 40.000 0.00 0.00 0.00 1.98
626 632 4.459337 GGTGAAATCCTTTTTCGGTGATCT 59.541 41.667 0.00 0.00 0.00 2.75
627 633 4.380550 GGGTGAAATCCTTTTTCGGTGATC 60.381 45.833 0.00 0.00 0.00 2.92
628 634 3.509967 GGGTGAAATCCTTTTTCGGTGAT 59.490 43.478 0.00 0.00 0.00 3.06
629 635 2.888414 GGGTGAAATCCTTTTTCGGTGA 59.112 45.455 0.00 0.00 0.00 4.02
630 636 2.029380 GGGGTGAAATCCTTTTTCGGTG 60.029 50.000 0.00 0.00 0.00 4.94
631 637 2.244695 GGGGTGAAATCCTTTTTCGGT 58.755 47.619 0.00 0.00 0.00 4.69
632 638 1.201414 CGGGGTGAAATCCTTTTTCGG 59.799 52.381 0.00 0.00 0.00 4.30
633 639 1.402325 GCGGGGTGAAATCCTTTTTCG 60.402 52.381 0.00 0.00 0.00 3.46
634 640 1.893137 AGCGGGGTGAAATCCTTTTTC 59.107 47.619 0.00 0.00 0.00 2.29
635 641 2.009681 AGCGGGGTGAAATCCTTTTT 57.990 45.000 0.00 0.00 0.00 1.94
636 642 2.009681 AAGCGGGGTGAAATCCTTTT 57.990 45.000 0.00 0.00 0.00 2.27
637 643 2.009681 AAAGCGGGGTGAAATCCTTT 57.990 45.000 0.00 0.00 0.00 3.11
638 644 2.891191 TAAAGCGGGGTGAAATCCTT 57.109 45.000 0.00 0.00 0.00 3.36
639 645 4.513406 TTATAAAGCGGGGTGAAATCCT 57.487 40.909 0.00 0.00 0.00 3.24
640 646 5.784578 ATTTATAAAGCGGGGTGAAATCC 57.215 39.130 3.94 0.00 0.00 3.01
641 647 8.797266 CTTTATTTATAAAGCGGGGTGAAATC 57.203 34.615 8.78 0.00 41.69 2.17
654 660 8.861086 TCTGTGGTGGTTTGCTTTATTTATAAA 58.139 29.630 0.00 0.00 0.00 1.40
655 661 8.301002 GTCTGTGGTGGTTTGCTTTATTTATAA 58.699 33.333 0.00 0.00 0.00 0.98
656 662 7.448777 TGTCTGTGGTGGTTTGCTTTATTTATA 59.551 33.333 0.00 0.00 0.00 0.98
657 663 6.266558 TGTCTGTGGTGGTTTGCTTTATTTAT 59.733 34.615 0.00 0.00 0.00 1.40
658 664 5.594725 TGTCTGTGGTGGTTTGCTTTATTTA 59.405 36.000 0.00 0.00 0.00 1.40
659 665 4.404073 TGTCTGTGGTGGTTTGCTTTATTT 59.596 37.500 0.00 0.00 0.00 1.40
660 666 3.957497 TGTCTGTGGTGGTTTGCTTTATT 59.043 39.130 0.00 0.00 0.00 1.40
661 667 3.317993 GTGTCTGTGGTGGTTTGCTTTAT 59.682 43.478 0.00 0.00 0.00 1.40
662 668 2.685897 GTGTCTGTGGTGGTTTGCTTTA 59.314 45.455 0.00 0.00 0.00 1.85
663 669 1.476488 GTGTCTGTGGTGGTTTGCTTT 59.524 47.619 0.00 0.00 0.00 3.51
664 670 1.102978 GTGTCTGTGGTGGTTTGCTT 58.897 50.000 0.00 0.00 0.00 3.91
665 671 0.034574 TGTGTCTGTGGTGGTTTGCT 60.035 50.000 0.00 0.00 0.00 3.91
666 672 0.814457 TTGTGTCTGTGGTGGTTTGC 59.186 50.000 0.00 0.00 0.00 3.68
667 673 1.405105 CCTTGTGTCTGTGGTGGTTTG 59.595 52.381 0.00 0.00 0.00 2.93
668 674 1.005450 ACCTTGTGTCTGTGGTGGTTT 59.995 47.619 0.00 0.00 0.00 3.27
669 675 0.623723 ACCTTGTGTCTGTGGTGGTT 59.376 50.000 0.00 0.00 0.00 3.67
670 676 1.502690 TACCTTGTGTCTGTGGTGGT 58.497 50.000 0.00 0.00 34.33 4.16
671 677 2.699954 GATACCTTGTGTCTGTGGTGG 58.300 52.381 0.00 0.00 34.33 4.61
672 678 2.337583 CGATACCTTGTGTCTGTGGTG 58.662 52.381 0.00 0.00 34.33 4.17
673 679 1.337823 GCGATACCTTGTGTCTGTGGT 60.338 52.381 0.00 0.00 36.66 4.16
674 680 1.337728 TGCGATACCTTGTGTCTGTGG 60.338 52.381 0.00 0.00 0.00 4.17
675 681 2.078849 TGCGATACCTTGTGTCTGTG 57.921 50.000 0.00 0.00 0.00 3.66
676 682 2.831685 TTGCGATACCTTGTGTCTGT 57.168 45.000 0.00 0.00 0.00 3.41
677 683 3.436704 ACATTTGCGATACCTTGTGTCTG 59.563 43.478 0.00 0.00 0.00 3.51
678 684 3.674997 ACATTTGCGATACCTTGTGTCT 58.325 40.909 0.00 0.00 0.00 3.41
679 685 3.181510 GGACATTTGCGATACCTTGTGTC 60.182 47.826 0.00 0.00 35.28 3.67
680 686 2.747446 GGACATTTGCGATACCTTGTGT 59.253 45.455 0.00 0.00 0.00 3.72
681 687 2.746904 TGGACATTTGCGATACCTTGTG 59.253 45.455 0.00 0.00 0.00 3.33
682 688 2.747446 GTGGACATTTGCGATACCTTGT 59.253 45.455 0.00 0.00 0.00 3.16
683 689 2.097466 GGTGGACATTTGCGATACCTTG 59.903 50.000 0.00 0.00 0.00 3.61
684 690 2.365582 GGTGGACATTTGCGATACCTT 58.634 47.619 0.00 0.00 0.00 3.50
685 691 1.408266 GGGTGGACATTTGCGATACCT 60.408 52.381 0.00 0.00 0.00 3.08
686 692 1.021968 GGGTGGACATTTGCGATACC 58.978 55.000 0.00 0.00 0.00 2.73
687 693 1.021968 GGGGTGGACATTTGCGATAC 58.978 55.000 0.00 0.00 0.00 2.24
688 694 0.106918 GGGGGTGGACATTTGCGATA 60.107 55.000 0.00 0.00 0.00 2.92
689 695 1.379843 GGGGGTGGACATTTGCGAT 60.380 57.895 0.00 0.00 0.00 4.58
690 696 2.034999 GGGGGTGGACATTTGCGA 59.965 61.111 0.00 0.00 0.00 5.10
704 710 1.525995 GTGTGACTGTGTGTGGGGG 60.526 63.158 0.00 0.00 0.00 5.40
705 711 1.525995 GGTGTGACTGTGTGTGGGG 60.526 63.158 0.00 0.00 0.00 4.96
706 712 1.095228 GTGGTGTGACTGTGTGTGGG 61.095 60.000 0.00 0.00 0.00 4.61
707 713 0.392327 TGTGGTGTGACTGTGTGTGG 60.392 55.000 0.00 0.00 0.00 4.17
708 714 1.447945 TTGTGGTGTGACTGTGTGTG 58.552 50.000 0.00 0.00 0.00 3.82
709 715 2.192664 TTTGTGGTGTGACTGTGTGT 57.807 45.000 0.00 0.00 0.00 3.72
710 716 3.876914 ACTATTTGTGGTGTGACTGTGTG 59.123 43.478 0.00 0.00 0.00 3.82
711 717 4.150897 ACTATTTGTGGTGTGACTGTGT 57.849 40.909 0.00 0.00 0.00 3.72
712 718 5.053811 TGTACTATTTGTGGTGTGACTGTG 58.946 41.667 0.00 0.00 0.00 3.66
713 719 5.284861 TGTACTATTTGTGGTGTGACTGT 57.715 39.130 0.00 0.00 0.00 3.55
714 720 5.989168 TCTTGTACTATTTGTGGTGTGACTG 59.011 40.000 0.00 0.00 0.00 3.51
715 721 6.169557 TCTTGTACTATTTGTGGTGTGACT 57.830 37.500 0.00 0.00 0.00 3.41
716 722 5.408604 CCTCTTGTACTATTTGTGGTGTGAC 59.591 44.000 0.00 0.00 0.00 3.67
717 723 5.512404 CCCTCTTGTACTATTTGTGGTGTGA 60.512 44.000 0.00 0.00 0.00 3.58
718 724 4.695455 CCCTCTTGTACTATTTGTGGTGTG 59.305 45.833 0.00 0.00 0.00 3.82
719 725 4.349930 ACCCTCTTGTACTATTTGTGGTGT 59.650 41.667 0.00 0.00 0.00 4.16
720 726 4.906618 ACCCTCTTGTACTATTTGTGGTG 58.093 43.478 0.00 0.00 0.00 4.17
721 727 5.309806 AGAACCCTCTTGTACTATTTGTGGT 59.690 40.000 0.00 0.00 0.00 4.16
722 728 5.643777 CAGAACCCTCTTGTACTATTTGTGG 59.356 44.000 0.00 0.00 0.00 4.17
723 729 5.122396 GCAGAACCCTCTTGTACTATTTGTG 59.878 44.000 0.00 0.00 0.00 3.33
724 730 5.013183 AGCAGAACCCTCTTGTACTATTTGT 59.987 40.000 0.00 0.00 0.00 2.83
725 731 5.352569 CAGCAGAACCCTCTTGTACTATTTG 59.647 44.000 0.00 0.00 0.00 2.32
726 732 5.248477 TCAGCAGAACCCTCTTGTACTATTT 59.752 40.000 0.00 0.00 0.00 1.40
727 733 4.777896 TCAGCAGAACCCTCTTGTACTATT 59.222 41.667 0.00 0.00 0.00 1.73
728 734 4.353777 TCAGCAGAACCCTCTTGTACTAT 58.646 43.478 0.00 0.00 0.00 2.12
729 735 3.764434 CTCAGCAGAACCCTCTTGTACTA 59.236 47.826 0.00 0.00 0.00 1.82
730 736 2.564947 CTCAGCAGAACCCTCTTGTACT 59.435 50.000 0.00 0.00 0.00 2.73
731 737 2.354203 CCTCAGCAGAACCCTCTTGTAC 60.354 54.545 0.00 0.00 0.00 2.90
732 738 1.902508 CCTCAGCAGAACCCTCTTGTA 59.097 52.381 0.00 0.00 0.00 2.41
733 739 0.689623 CCTCAGCAGAACCCTCTTGT 59.310 55.000 0.00 0.00 0.00 3.16
734 740 0.035630 CCCTCAGCAGAACCCTCTTG 60.036 60.000 0.00 0.00 0.00 3.02
735 741 1.846712 GCCCTCAGCAGAACCCTCTT 61.847 60.000 0.00 0.00 42.97 2.85
736 742 2.297129 GCCCTCAGCAGAACCCTCT 61.297 63.158 0.00 0.00 42.97 3.69
737 743 2.270527 GCCCTCAGCAGAACCCTC 59.729 66.667 0.00 0.00 42.97 4.30
746 752 0.819259 TGTTGAACTGTGCCCTCAGC 60.819 55.000 0.00 0.00 44.14 4.26
747 753 1.605710 CTTGTTGAACTGTGCCCTCAG 59.394 52.381 0.00 0.00 40.80 3.35
748 754 1.679139 CTTGTTGAACTGTGCCCTCA 58.321 50.000 0.00 0.00 0.00 3.86
749 755 0.312102 GCTTGTTGAACTGTGCCCTC 59.688 55.000 0.00 0.00 0.00 4.30
750 756 1.109323 GGCTTGTTGAACTGTGCCCT 61.109 55.000 13.00 0.00 34.81 5.19
751 757 1.363807 GGCTTGTTGAACTGTGCCC 59.636 57.895 13.00 0.00 34.81 5.36
752 758 1.109323 AGGGCTTGTTGAACTGTGCC 61.109 55.000 14.77 14.77 39.61 5.01
753 759 0.031178 CAGGGCTTGTTGAACTGTGC 59.969 55.000 0.00 0.00 0.00 4.57
754 760 1.679139 TCAGGGCTTGTTGAACTGTG 58.321 50.000 0.00 0.00 0.00 3.66
755 761 2.435372 TTCAGGGCTTGTTGAACTGT 57.565 45.000 0.00 0.00 0.00 3.55
756 762 3.447742 GTTTTCAGGGCTTGTTGAACTG 58.552 45.455 0.00 0.00 33.36 3.16
757 763 2.099098 CGTTTTCAGGGCTTGTTGAACT 59.901 45.455 0.00 0.00 33.36 3.01
758 764 2.098443 TCGTTTTCAGGGCTTGTTGAAC 59.902 45.455 0.00 0.00 33.36 3.18
759 765 2.370349 TCGTTTTCAGGGCTTGTTGAA 58.630 42.857 0.00 0.00 0.00 2.69
760 766 2.045561 TCGTTTTCAGGGCTTGTTGA 57.954 45.000 0.00 0.00 0.00 3.18
761 767 2.861462 TTCGTTTTCAGGGCTTGTTG 57.139 45.000 0.00 0.00 0.00 3.33
762 768 3.056465 TGTTTTCGTTTTCAGGGCTTGTT 60.056 39.130 0.00 0.00 0.00 2.83
763 769 2.494073 TGTTTTCGTTTTCAGGGCTTGT 59.506 40.909 0.00 0.00 0.00 3.16
764 770 3.157932 TGTTTTCGTTTTCAGGGCTTG 57.842 42.857 0.00 0.00 0.00 4.01
765 771 3.878160 TTGTTTTCGTTTTCAGGGCTT 57.122 38.095 0.00 0.00 0.00 4.35
766 772 3.430236 CCTTTGTTTTCGTTTTCAGGGCT 60.430 43.478 0.00 0.00 0.00 5.19
767 773 2.863740 CCTTTGTTTTCGTTTTCAGGGC 59.136 45.455 0.00 0.00 0.00 5.19
768 774 2.863740 GCCTTTGTTTTCGTTTTCAGGG 59.136 45.455 0.00 0.00 0.00 4.45
769 775 2.533942 CGCCTTTGTTTTCGTTTTCAGG 59.466 45.455 0.00 0.00 0.00 3.86
770 776 2.533942 CCGCCTTTGTTTTCGTTTTCAG 59.466 45.455 0.00 0.00 0.00 3.02
771 777 2.531206 CCGCCTTTGTTTTCGTTTTCA 58.469 42.857 0.00 0.00 0.00 2.69
772 778 1.855978 CCCGCCTTTGTTTTCGTTTTC 59.144 47.619 0.00 0.00 0.00 2.29
773 779 1.477295 TCCCGCCTTTGTTTTCGTTTT 59.523 42.857 0.00 0.00 0.00 2.43
774 780 1.104630 TCCCGCCTTTGTTTTCGTTT 58.895 45.000 0.00 0.00 0.00 3.60
775 781 1.104630 TTCCCGCCTTTGTTTTCGTT 58.895 45.000 0.00 0.00 0.00 3.85
776 782 0.382873 GTTCCCGCCTTTGTTTTCGT 59.617 50.000 0.00 0.00 0.00 3.85
777 783 0.318360 GGTTCCCGCCTTTGTTTTCG 60.318 55.000 0.00 0.00 0.00 3.46
778 784 0.032952 GGGTTCCCGCCTTTGTTTTC 59.967 55.000 0.00 0.00 0.00 2.29
779 785 1.740332 CGGGTTCCCGCCTTTGTTTT 61.740 55.000 17.41 0.00 42.86 2.43
780 786 2.197605 CGGGTTCCCGCCTTTGTTT 61.198 57.895 17.41 0.00 42.86 2.83
781 787 2.596338 CGGGTTCCCGCCTTTGTT 60.596 61.111 17.41 0.00 42.86 2.83
790 796 3.365265 CTGCTGTTGCGGGTTCCC 61.365 66.667 0.00 0.00 43.34 3.97
791 797 4.043200 GCTGCTGTTGCGGGTTCC 62.043 66.667 0.00 0.00 45.30 3.62
795 801 0.955428 TTCTTAGCTGCTGTTGCGGG 60.955 55.000 13.43 0.00 45.30 6.13
797 803 0.179205 GCTTCTTAGCTGCTGTTGCG 60.179 55.000 13.43 0.00 44.27 4.85
798 804 3.691110 GCTTCTTAGCTGCTGTTGC 57.309 52.632 13.43 5.86 44.27 4.17
808 814 3.553922 CCAGAGCCGGATTAGCTTCTTAG 60.554 52.174 5.05 0.00 41.75 2.18
809 815 2.365617 CCAGAGCCGGATTAGCTTCTTA 59.634 50.000 5.05 0.00 41.75 2.10
810 816 1.139853 CCAGAGCCGGATTAGCTTCTT 59.860 52.381 5.05 0.00 41.75 2.52
811 817 0.755686 CCAGAGCCGGATTAGCTTCT 59.244 55.000 5.05 0.00 41.75 2.85
812 818 0.466124 ACCAGAGCCGGATTAGCTTC 59.534 55.000 5.05 0.00 41.75 3.86
813 819 0.179000 CACCAGAGCCGGATTAGCTT 59.821 55.000 5.05 0.00 41.75 3.74
814 820 1.690219 CCACCAGAGCCGGATTAGCT 61.690 60.000 5.05 0.00 45.23 3.32
815 821 1.227674 CCACCAGAGCCGGATTAGC 60.228 63.158 5.05 0.00 0.00 3.09
816 822 0.179073 CACCACCAGAGCCGGATTAG 60.179 60.000 5.05 0.00 0.00 1.73
817 823 1.622607 CCACCACCAGAGCCGGATTA 61.623 60.000 5.05 0.00 0.00 1.75
818 824 2.671070 CACCACCAGAGCCGGATT 59.329 61.111 5.05 0.00 0.00 3.01
819 825 3.402681 CCACCACCAGAGCCGGAT 61.403 66.667 5.05 0.00 0.00 4.18
820 826 4.631740 TCCACCACCAGAGCCGGA 62.632 66.667 5.05 0.00 0.00 5.14
821 827 4.087892 CTCCACCACCAGAGCCGG 62.088 72.222 0.00 0.00 0.00 6.13
822 828 4.087892 CCTCCACCACCAGAGCCG 62.088 72.222 0.00 0.00 0.00 5.52
823 829 2.607750 TCCTCCACCACCAGAGCC 60.608 66.667 0.00 0.00 0.00 4.70
824 830 2.664081 CCTCCTCCACCACCAGAGC 61.664 68.421 0.00 0.00 0.00 4.09
825 831 0.545309 TTCCTCCTCCACCACCAGAG 60.545 60.000 0.00 0.00 0.00 3.35
826 832 0.545309 CTTCCTCCTCCACCACCAGA 60.545 60.000 0.00 0.00 0.00 3.86
827 833 1.986413 CTTCCTCCTCCACCACCAG 59.014 63.158 0.00 0.00 0.00 4.00
828 834 2.224159 GCTTCCTCCTCCACCACCA 61.224 63.158 0.00 0.00 0.00 4.17
829 835 2.671682 GCTTCCTCCTCCACCACC 59.328 66.667 0.00 0.00 0.00 4.61
830 836 2.266055 CGCTTCCTCCTCCACCAC 59.734 66.667 0.00 0.00 0.00 4.16
831 837 3.003173 CCGCTTCCTCCTCCACCA 61.003 66.667 0.00 0.00 0.00 4.17
832 838 4.475135 GCCGCTTCCTCCTCCACC 62.475 72.222 0.00 0.00 0.00 4.61
833 839 4.821589 CGCCGCTTCCTCCTCCAC 62.822 72.222 0.00 0.00 0.00 4.02
853 859 2.899339 GATGGCTCTCCGCTTGGC 60.899 66.667 0.00 0.00 39.13 4.52
854 860 2.587194 CGATGGCTCTCCGCTTGG 60.587 66.667 0.00 0.00 39.13 3.61
855 861 1.591059 CTCGATGGCTCTCCGCTTG 60.591 63.158 0.00 0.00 39.13 4.01
856 862 2.811101 CTCGATGGCTCTCCGCTT 59.189 61.111 0.00 0.00 39.13 4.68
857 863 3.910490 GCTCGATGGCTCTCCGCT 61.910 66.667 0.00 0.00 39.13 5.52
859 865 4.637489 CCGCTCGATGGCTCTCCG 62.637 72.222 0.00 0.00 34.14 4.63
860 866 3.206211 CTCCGCTCGATGGCTCTCC 62.206 68.421 0.00 0.00 0.00 3.71
861 867 2.334653 CTCCGCTCGATGGCTCTC 59.665 66.667 0.00 0.00 0.00 3.20
862 868 3.222855 CCTCCGCTCGATGGCTCT 61.223 66.667 0.00 0.00 0.00 4.09
863 869 3.492311 GACCTCCGCTCGATGGCTC 62.492 68.421 0.00 0.00 0.00 4.70
864 870 3.532155 GACCTCCGCTCGATGGCT 61.532 66.667 0.00 0.00 0.00 4.75
865 871 4.933064 CGACCTCCGCTCGATGGC 62.933 72.222 0.00 0.00 32.65 4.40
866 872 4.271816 CCGACCTCCGCTCGATGG 62.272 72.222 0.00 0.00 36.84 3.51
867 873 4.933064 GCCGACCTCCGCTCGATG 62.933 72.222 0.00 0.00 36.84 3.84
871 877 2.143594 ATTATCGCCGACCTCCGCTC 62.144 60.000 0.00 0.00 36.84 5.03
872 878 0.892358 TATTATCGCCGACCTCCGCT 60.892 55.000 0.00 0.00 36.84 5.52
873 879 0.038892 TTATTATCGCCGACCTCCGC 60.039 55.000 0.00 0.00 36.84 5.54
874 880 2.259618 CATTATTATCGCCGACCTCCG 58.740 52.381 0.00 0.00 38.18 4.63
875 881 3.314541 ACATTATTATCGCCGACCTCC 57.685 47.619 0.00 0.00 0.00 4.30
876 882 4.304110 TCAACATTATTATCGCCGACCTC 58.696 43.478 0.00 0.00 0.00 3.85
877 883 4.330944 TCAACATTATTATCGCCGACCT 57.669 40.909 0.00 0.00 0.00 3.85
878 884 4.142902 CCATCAACATTATTATCGCCGACC 60.143 45.833 0.00 0.00 0.00 4.79
879 885 4.669197 GCCATCAACATTATTATCGCCGAC 60.669 45.833 0.00 0.00 0.00 4.79
880 886 3.435327 GCCATCAACATTATTATCGCCGA 59.565 43.478 0.00 0.00 0.00 5.54
881 887 3.724716 CGCCATCAACATTATTATCGCCG 60.725 47.826 0.00 0.00 0.00 6.46
882 888 3.188460 ACGCCATCAACATTATTATCGCC 59.812 43.478 0.00 0.00 0.00 5.54
883 889 4.394795 GACGCCATCAACATTATTATCGC 58.605 43.478 0.00 0.00 0.00 4.58
884 890 4.142902 GGGACGCCATCAACATTATTATCG 60.143 45.833 0.00 0.00 0.00 2.92
885 891 5.296813 GGGACGCCATCAACATTATTATC 57.703 43.478 0.00 0.00 0.00 1.75
908 914 3.081409 TTAGCCGCCTCCAGGACC 61.081 66.667 0.00 0.00 37.39 4.46
909 915 2.501610 CTTAGCCGCCTCCAGGAC 59.498 66.667 0.00 0.00 37.39 3.85
910 916 3.470888 GCTTAGCCGCCTCCAGGA 61.471 66.667 0.00 0.00 37.39 3.86
911 917 4.899239 CGCTTAGCCGCCTCCAGG 62.899 72.222 0.00 0.00 38.53 4.45
912 918 4.148825 ACGCTTAGCCGCCTCCAG 62.149 66.667 0.00 0.00 0.00 3.86
913 919 4.143333 GACGCTTAGCCGCCTCCA 62.143 66.667 0.00 0.00 0.00 3.86
914 920 4.893601 GGACGCTTAGCCGCCTCC 62.894 72.222 0.00 0.00 0.00 4.30
921 927 2.583593 CTCTGGCGGACGCTTAGC 60.584 66.667 16.72 0.00 41.60 3.09
922 928 2.583593 GCTCTGGCGGACGCTTAG 60.584 66.667 16.72 14.39 41.60 2.18
923 929 3.068691 AGCTCTGGCGGACGCTTA 61.069 61.111 16.72 5.44 44.37 3.09
924 930 4.749310 CAGCTCTGGCGGACGCTT 62.749 66.667 16.72 2.31 44.37 4.68
928 934 2.507110 TACTTGCAGCTCTGGCGGAC 62.507 60.000 0.00 0.00 44.37 4.79
929 935 2.282783 TACTTGCAGCTCTGGCGGA 61.283 57.895 0.00 0.00 44.37 5.54
930 936 2.103042 GTACTTGCAGCTCTGGCGG 61.103 63.158 0.00 0.00 44.37 6.13
931 937 2.103042 GGTACTTGCAGCTCTGGCG 61.103 63.158 0.00 0.00 44.37 5.69
932 938 1.746991 GGGTACTTGCAGCTCTGGC 60.747 63.158 0.00 0.00 39.06 4.85
933 939 0.674895 GTGGGTACTTGCAGCTCTGG 60.675 60.000 0.00 0.00 0.00 3.86
934 940 0.035317 TGTGGGTACTTGCAGCTCTG 59.965 55.000 0.00 0.00 0.00 3.35
935 941 0.035458 GTGTGGGTACTTGCAGCTCT 59.965 55.000 0.00 0.00 0.00 4.09
936 942 0.250295 TGTGTGGGTACTTGCAGCTC 60.250 55.000 0.00 0.00 0.00 4.09
937 943 0.401738 ATGTGTGGGTACTTGCAGCT 59.598 50.000 0.00 0.00 0.00 4.24
938 944 1.247567 AATGTGTGGGTACTTGCAGC 58.752 50.000 0.00 0.00 0.00 5.25
939 945 3.068024 ACAAAATGTGTGGGTACTTGCAG 59.932 43.478 0.00 0.00 39.72 4.41
940 946 3.027412 ACAAAATGTGTGGGTACTTGCA 58.973 40.909 0.00 0.00 39.72 4.08
941 947 3.726291 ACAAAATGTGTGGGTACTTGC 57.274 42.857 0.00 0.00 39.72 4.01
942 948 6.565234 TGTTTACAAAATGTGTGGGTACTTG 58.435 36.000 0.00 0.00 41.89 3.16
943 949 6.681865 GCTGTTTACAAAATGTGTGGGTACTT 60.682 38.462 0.00 0.00 41.89 2.24
944 950 5.221165 GCTGTTTACAAAATGTGTGGGTACT 60.221 40.000 0.00 0.00 41.89 2.73
945 951 4.979815 GCTGTTTACAAAATGTGTGGGTAC 59.020 41.667 0.00 0.00 41.89 3.34
946 952 4.261238 CGCTGTTTACAAAATGTGTGGGTA 60.261 41.667 0.00 0.00 41.89 3.69
947 953 3.490078 CGCTGTTTACAAAATGTGTGGGT 60.490 43.478 0.00 0.00 41.89 4.51
948 954 3.049206 CGCTGTTTACAAAATGTGTGGG 58.951 45.455 0.00 0.00 41.89 4.61
949 955 3.701241 ACGCTGTTTACAAAATGTGTGG 58.299 40.909 0.00 0.00 41.89 4.17
950 956 4.346970 TGACGCTGTTTACAAAATGTGTG 58.653 39.130 0.00 0.00 41.89 3.82
951 957 4.095782 ACTGACGCTGTTTACAAAATGTGT 59.904 37.500 0.00 0.00 44.82 3.72
952 958 4.437495 CACTGACGCTGTTTACAAAATGTG 59.563 41.667 0.00 0.00 0.00 3.21
953 959 4.497340 CCACTGACGCTGTTTACAAAATGT 60.497 41.667 0.00 0.00 0.00 2.71
954 960 3.974401 CCACTGACGCTGTTTACAAAATG 59.026 43.478 0.00 0.00 0.00 2.32
955 961 3.550030 GCCACTGACGCTGTTTACAAAAT 60.550 43.478 0.00 0.00 0.00 1.82
956 962 2.223386 GCCACTGACGCTGTTTACAAAA 60.223 45.455 0.00 0.00 0.00 2.44
957 963 1.332375 GCCACTGACGCTGTTTACAAA 59.668 47.619 0.00 0.00 0.00 2.83
958 964 0.941542 GCCACTGACGCTGTTTACAA 59.058 50.000 0.00 0.00 0.00 2.41
959 965 0.179070 TGCCACTGACGCTGTTTACA 60.179 50.000 0.00 0.00 0.00 2.41
960 966 0.234884 GTGCCACTGACGCTGTTTAC 59.765 55.000 0.00 0.00 0.00 2.01
961 967 0.179070 TGTGCCACTGACGCTGTTTA 60.179 50.000 0.00 0.00 0.00 2.01
962 968 0.819259 ATGTGCCACTGACGCTGTTT 60.819 50.000 0.00 0.00 0.00 2.83
963 969 1.227943 ATGTGCCACTGACGCTGTT 60.228 52.632 0.00 0.00 0.00 3.16
964 970 1.669115 GATGTGCCACTGACGCTGT 60.669 57.895 0.00 0.00 0.00 4.40
965 971 2.733671 CGATGTGCCACTGACGCTG 61.734 63.158 0.00 0.00 0.00 5.18
966 972 2.433145 CGATGTGCCACTGACGCT 60.433 61.111 0.00 0.00 0.00 5.07
967 973 1.959899 CTTCGATGTGCCACTGACGC 61.960 60.000 0.00 0.00 0.00 5.19
968 974 0.388520 TCTTCGATGTGCCACTGACG 60.389 55.000 0.00 0.00 0.00 4.35
969 975 1.354040 CTCTTCGATGTGCCACTGAC 58.646 55.000 0.00 0.00 0.00 3.51
970 976 0.247460 CCTCTTCGATGTGCCACTGA 59.753 55.000 0.00 0.00 0.00 3.41
971 977 0.247460 TCCTCTTCGATGTGCCACTG 59.753 55.000 0.00 0.00 0.00 3.66
972 978 0.976641 TTCCTCTTCGATGTGCCACT 59.023 50.000 0.00 0.00 0.00 4.00
973 979 1.079503 GTTCCTCTTCGATGTGCCAC 58.920 55.000 0.00 0.00 0.00 5.01
974 980 0.976641 AGTTCCTCTTCGATGTGCCA 59.023 50.000 0.00 0.00 0.00 4.92
975 981 1.646189 GAGTTCCTCTTCGATGTGCC 58.354 55.000 0.00 0.00 0.00 5.01
976 982 1.272781 CGAGTTCCTCTTCGATGTGC 58.727 55.000 0.00 0.00 0.00 4.57
977 983 1.135257 AGCGAGTTCCTCTTCGATGTG 60.135 52.381 0.00 0.00 0.00 3.21
978 984 1.135257 CAGCGAGTTCCTCTTCGATGT 60.135 52.381 4.22 0.00 37.25 3.06
979 985 1.554392 CAGCGAGTTCCTCTTCGATG 58.446 55.000 0.00 0.00 35.76 3.84
980 986 0.457851 CCAGCGAGTTCCTCTTCGAT 59.542 55.000 0.00 0.00 0.00 3.59
981 987 0.608308 TCCAGCGAGTTCCTCTTCGA 60.608 55.000 0.00 0.00 0.00 3.71
982 988 0.457851 ATCCAGCGAGTTCCTCTTCG 59.542 55.000 0.00 0.00 0.00 3.79
983 989 1.478510 TCATCCAGCGAGTTCCTCTTC 59.521 52.381 0.00 0.00 0.00 2.87
984 990 1.205893 GTCATCCAGCGAGTTCCTCTT 59.794 52.381 0.00 0.00 0.00 2.85
985 991 0.820871 GTCATCCAGCGAGTTCCTCT 59.179 55.000 0.00 0.00 0.00 3.69
986 992 0.532573 TGTCATCCAGCGAGTTCCTC 59.467 55.000 0.00 0.00 0.00 3.71
987 993 0.976641 TTGTCATCCAGCGAGTTCCT 59.023 50.000 0.00 0.00 0.00 3.36
988 994 1.363744 CTTGTCATCCAGCGAGTTCC 58.636 55.000 0.00 0.00 0.00 3.62
989 995 0.723981 GCTTGTCATCCAGCGAGTTC 59.276 55.000 0.00 0.00 0.00 3.01
990 996 0.322975 AGCTTGTCATCCAGCGAGTT 59.677 50.000 0.00 0.00 0.00 3.01
991 997 0.322975 AAGCTTGTCATCCAGCGAGT 59.677 50.000 0.00 0.00 0.00 4.18
992 998 2.299993 TAAGCTTGTCATCCAGCGAG 57.700 50.000 9.86 0.00 0.00 5.03
993 999 2.168313 TGATAAGCTTGTCATCCAGCGA 59.832 45.455 20.62 0.00 0.00 4.93
994 1000 2.554142 TGATAAGCTTGTCATCCAGCG 58.446 47.619 20.62 0.00 0.00 5.18
995 1001 3.304525 GCATGATAAGCTTGTCATCCAGC 60.305 47.826 29.46 25.53 36.98 4.85
996 1002 3.881089 TGCATGATAAGCTTGTCATCCAG 59.119 43.478 29.46 21.23 36.98 3.86
997 1003 3.888583 TGCATGATAAGCTTGTCATCCA 58.111 40.909 29.46 25.70 36.98 3.41
998 1004 4.795268 CATGCATGATAAGCTTGTCATCC 58.205 43.478 29.46 23.65 36.98 3.51
999 1005 4.227538 GCATGCATGATAAGCTTGTCATC 58.772 43.478 29.46 23.59 36.98 2.92
1000 1006 3.634910 TGCATGCATGATAAGCTTGTCAT 59.365 39.130 30.64 27.40 39.22 3.06
1001 1007 3.018149 TGCATGCATGATAAGCTTGTCA 58.982 40.909 30.64 25.54 38.82 3.58
1002 1008 3.703286 TGCATGCATGATAAGCTTGTC 57.297 42.857 30.64 15.70 38.82 3.18
1003 1009 4.665833 AATGCATGCATGATAAGCTTGT 57.334 36.364 32.79 11.05 38.82 3.16
1004 1010 7.758495 TCTATAATGCATGCATGATAAGCTTG 58.242 34.615 32.79 20.70 39.37 4.01
1005 1011 7.933215 TCTATAATGCATGCATGATAAGCTT 57.067 32.000 32.79 17.81 36.68 3.74
1006 1012 8.406297 CAATCTATAATGCATGCATGATAAGCT 58.594 33.333 32.79 17.86 36.68 3.74
1007 1013 8.403236 TCAATCTATAATGCATGCATGATAAGC 58.597 33.333 32.79 14.79 36.68 3.09
1008 1014 9.717892 GTCAATCTATAATGCATGCATGATAAG 57.282 33.333 32.79 24.17 36.68 1.73
1009 1015 9.233649 TGTCAATCTATAATGCATGCATGATAA 57.766 29.630 32.79 22.53 36.68 1.75
1010 1016 8.795842 TGTCAATCTATAATGCATGCATGATA 57.204 30.769 32.79 30.39 36.68 2.15
1011 1017 7.696992 TGTCAATCTATAATGCATGCATGAT 57.303 32.000 32.79 30.91 36.68 2.45
1012 1018 7.013464 TGTTGTCAATCTATAATGCATGCATGA 59.987 33.333 32.79 26.66 36.68 3.07
1013 1019 7.142680 TGTTGTCAATCTATAATGCATGCATG 58.857 34.615 32.79 22.70 36.68 4.06
1014 1020 7.279750 TGTTGTCAATCTATAATGCATGCAT 57.720 32.000 27.46 27.46 38.46 3.96
1015 1021 6.696441 TGTTGTCAATCTATAATGCATGCA 57.304 33.333 25.04 25.04 0.00 3.96
1058 1064 3.204382 TCCTTCTTCCTGTTTGGTTTCCT 59.796 43.478 0.00 0.00 37.07 3.36
1083 1089 4.803452 TGATTCTTCCTGTTTGGTTTCCT 58.197 39.130 0.00 0.00 37.07 3.36
1262 1274 7.360691 CGAAGCTCATTTCATTGAAGAAGAAGA 60.361 37.037 0.00 0.00 0.00 2.87
1263 1275 6.741811 CGAAGCTCATTTCATTGAAGAAGAAG 59.258 38.462 0.00 0.00 0.00 2.85
1264 1276 6.348786 CCGAAGCTCATTTCATTGAAGAAGAA 60.349 38.462 0.00 0.00 0.00 2.52
1265 1277 5.122869 CCGAAGCTCATTTCATTGAAGAAGA 59.877 40.000 0.00 0.00 0.00 2.87
1266 1278 5.330295 CCGAAGCTCATTTCATTGAAGAAG 58.670 41.667 0.00 0.76 0.00 2.85
1267 1279 4.156556 CCCGAAGCTCATTTCATTGAAGAA 59.843 41.667 0.00 0.00 0.00 2.52
1292 1304 1.949847 GCTGGGAGAAGCTGCGACTA 61.950 60.000 0.00 0.00 40.20 2.59
1328 1340 3.131223 GTCTGACAAATGGAGGATCTCGA 59.869 47.826 2.24 0.00 33.73 4.04
1754 1810 1.995066 ATGGCGGTGTCCATCCTCA 60.995 57.895 0.00 0.00 43.00 3.86
1831 1887 1.220206 CACTAGCTGCCCAGGACTG 59.780 63.158 0.00 0.00 0.00 3.51
1923 1984 2.203252 CCATGGATGTCCCTGCCG 60.203 66.667 5.56 0.00 35.38 5.69
2001 2062 2.541233 AGTACTCCAGCTCATCCAGT 57.459 50.000 0.00 0.00 0.00 4.00
2098 2159 1.753956 GCCGTGTGTTCAACATTGAC 58.246 50.000 0.00 0.00 41.97 3.18
2228 2337 0.807667 GCGTACACCAGAGAGGCATG 60.808 60.000 0.00 0.00 43.14 4.06
2310 2422 1.728068 GCATGCATTTGCCATCAACA 58.272 45.000 14.21 0.00 41.18 3.33
2437 2549 0.761187 TCTCTCTGGCTTGCACACTT 59.239 50.000 0.00 0.00 0.00 3.16
2597 2790 8.526978 TGTTTTTAGCAATATCTTTGGTATGCA 58.473 29.630 0.00 0.00 33.17 3.96
2598 2791 8.925161 TGTTTTTAGCAATATCTTTGGTATGC 57.075 30.769 0.00 0.00 33.17 3.14
2610 2803 6.945435 TGGTCTTGGATCTGTTTTTAGCAATA 59.055 34.615 0.00 0.00 0.00 1.90
2863 3065 1.675310 CCATCTCTTGCGCCAACCA 60.675 57.895 4.18 0.00 0.00 3.67
2915 3117 0.179181 TTCGTCGGCACTAGCGTTAG 60.179 55.000 4.57 4.57 43.41 2.34
3288 3493 9.112725 TCCAAAGTAAGTTGGTTTCTTAGTAAC 57.887 33.333 4.00 0.00 46.93 2.50
3360 3565 2.093816 TGGCATGATGTCACTCTCACTC 60.094 50.000 0.00 0.00 0.00 3.51
3516 3721 9.135189 TCAGTCCTTTTATTTTGATCATATGGG 57.865 33.333 2.13 0.00 0.00 4.00
4093 4301 3.947910 AACAGGGACATTGCATCTTTG 57.052 42.857 0.00 0.00 0.00 2.77
4097 4305 2.083774 TCGAAACAGGGACATTGCATC 58.916 47.619 0.00 0.00 0.00 3.91
4124 4332 5.637809 GCAGCTTTACAAGGTTGGTAATAC 58.362 41.667 0.00 0.00 37.06 1.89
4128 4336 2.147958 CGCAGCTTTACAAGGTTGGTA 58.852 47.619 0.00 0.00 37.06 3.25
4167 6200 1.482593 CCCACCTCAGGTATGTCAGAC 59.517 57.143 0.00 0.00 32.11 3.51
4316 6382 2.656646 GGGCCCCTTTTTCTTGCG 59.343 61.111 12.23 0.00 0.00 4.85
4551 6633 3.539604 AGATACATCAGCCAAGTGAAGC 58.460 45.455 0.00 0.00 0.00 3.86
4821 6920 6.791887 TGAGAGCAAGTAGAACATGAAAAG 57.208 37.500 0.00 0.00 0.00 2.27
4867 6966 2.498078 GTCTAGGGAACAAGGTCCTCAG 59.502 54.545 3.85 2.07 37.85 3.35
4869 6968 2.822697 AGTCTAGGGAACAAGGTCCTC 58.177 52.381 3.85 0.00 37.85 3.71
4870 6969 3.710724 GTAGTCTAGGGAACAAGGTCCT 58.289 50.000 3.85 0.00 37.85 3.85
4871 6970 2.426381 CGTAGTCTAGGGAACAAGGTCC 59.574 54.545 0.00 0.00 36.90 4.46
5008 7107 6.352222 CCTGGTATGTACATTCCTTCTGAGTT 60.352 42.308 26.21 0.00 0.00 3.01
5289 7394 3.026431 TTCTTTCCCGCTAGCCCCG 62.026 63.158 9.66 0.00 0.00 5.73
5419 7626 4.675976 TTTCCTCCTCTTCGTTTGTGTA 57.324 40.909 0.00 0.00 0.00 2.90
5625 7841 2.749800 GCCCGAATAGGAGGAAAGCAAT 60.750 50.000 0.00 0.00 45.00 3.56
5737 7965 4.508662 CCAAGATGGAGTACTTTCAGGTC 58.491 47.826 0.00 0.00 40.96 3.85
5743 7971 2.375174 TGTGGCCAAGATGGAGTACTTT 59.625 45.455 7.24 0.00 40.96 2.66
5945 8197 3.496507 GCAGGAATAAAATCCGAGCTCTC 59.503 47.826 12.85 0.00 44.60 3.20
5954 8206 5.642919 TGCAATTTGTGGCAGGAATAAAATC 59.357 36.000 0.00 0.00 34.58 2.17
6008 8260 6.484643 ACGAATAGATAATTGCTTGATGCTGT 59.515 34.615 0.00 0.00 43.37 4.40
6030 8282 0.982852 AGAGGGATGGGCATGAACGA 60.983 55.000 0.00 0.00 0.00 3.85
6031 8283 0.816825 CAGAGGGATGGGCATGAACG 60.817 60.000 0.00 0.00 0.00 3.95
6049 8301 4.329545 GTCCTTGGGCAGCGACCA 62.330 66.667 0.00 0.00 40.08 4.02
6226 8485 7.895429 AGGACAATCCTCAATCTTTAATTTCCA 59.105 33.333 0.00 0.00 45.66 3.53
6497 9290 9.036980 ACTGTTGAGTAGGAACTATAAGAATGT 57.963 33.333 0.00 0.00 45.60 2.71
6541 9334 5.472148 TGATTTCGAAGCTAACGAGGTTAA 58.528 37.500 13.86 7.84 43.44 2.01
6542 9335 5.063180 TGATTTCGAAGCTAACGAGGTTA 57.937 39.130 13.86 4.16 43.44 2.85
6543 9336 3.921677 TGATTTCGAAGCTAACGAGGTT 58.078 40.909 13.86 0.00 46.06 3.50
6591 9392 6.587990 CAGTTCAGATGAGACGTCAGTAATTT 59.412 38.462 19.50 0.00 35.66 1.82
6660 9461 5.434408 CTGATGATGAACCAATCAAGGAGA 58.566 41.667 0.00 0.00 42.54 3.71
6711 9512 1.961394 AGCCTGAGAACGAACTACACA 59.039 47.619 0.00 0.00 0.00 3.72
6756 9557 5.757320 GGATGATACAGACTGAATCTTGGTG 59.243 44.000 10.08 0.00 34.41 4.17
6788 9589 1.675552 GGGTTGTGGGATGATTACGG 58.324 55.000 0.00 0.00 0.00 4.02
6802 9603 3.368323 GCATGGAAGTGTTATTGGGGTTG 60.368 47.826 0.00 0.00 0.00 3.77
6819 9620 0.819582 AATTTCGAAGCAGGGCATGG 59.180 50.000 0.00 0.00 0.00 3.66
6872 9673 6.425721 CGACAGTAATTCCTAAGAACCAAACA 59.574 38.462 0.00 0.00 33.97 2.83
6895 9696 7.116376 GTGAGTTATTCAGTTCAGATGAAACGA 59.884 37.037 0.00 0.00 39.92 3.85
6917 9718 6.728200 TGCACAGAAGATTAAAACAAGTGAG 58.272 36.000 0.00 0.00 0.00 3.51
7072 10204 2.164219 AGCAGGGCATGAAATTGTTACG 59.836 45.455 1.99 0.00 0.00 3.18
7084 10216 6.491403 AGAATATAAATTTCGAAGCAGGGCAT 59.509 34.615 0.00 0.00 0.00 4.40
7123 10255 1.890876 TCGTTGTTCACATGAAGGGG 58.109 50.000 0.00 0.00 34.27 4.79
7143 10275 4.062991 GGACAAGATGTGAACGGTTAACT 58.937 43.478 9.69 0.00 0.00 2.24
7242 10403 6.785076 TGTTTACCTTGGATTGGTCATAAGA 58.215 36.000 0.00 0.00 38.88 2.10
7243 10404 7.461182 TTGTTTACCTTGGATTGGTCATAAG 57.539 36.000 0.00 0.00 38.88 1.73
7244 10405 7.841282 TTTGTTTACCTTGGATTGGTCATAA 57.159 32.000 0.00 0.00 38.88 1.90
7245 10406 7.287927 TGTTTTGTTTACCTTGGATTGGTCATA 59.712 33.333 0.00 0.00 38.88 2.15
7274 10447 5.712917 AGGAGTGAGTAGTACAGAAGAAAGG 59.287 44.000 2.52 0.00 0.00 3.11
7356 10541 6.506500 TTGACGTAAACCAAACAAAAGGTA 57.493 33.333 0.00 0.00 37.07 3.08
7382 10567 8.511321 TGTGGTATATTCAGATGAAACAACAAC 58.489 33.333 0.00 3.05 37.61 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.