Multiple sequence alignment - TraesCS6B01G075400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G075400 chr6B 100.000 3418 0 0 437 3854 51731543 51734960 0.000000e+00 6312.0
1 TraesCS6B01G075400 chr6B 79.584 1107 160 43 2335 3410 52369009 52367938 0.000000e+00 732.0
2 TraesCS6B01G075400 chr6B 75.886 1157 221 46 999 2134 51559011 51560130 4.380000e-149 538.0
3 TraesCS6B01G075400 chr6B 80.427 562 101 6 998 1553 51435778 51435220 1.660000e-113 420.0
4 TraesCS6B01G075400 chr6B 82.114 492 83 5 994 1483 51537979 51538467 2.140000e-112 416.0
5 TraesCS6B01G075400 chr6B 80.930 430 56 13 1906 2324 52369487 52369073 2.230000e-82 316.0
6 TraesCS6B01G075400 chr6B 73.354 972 205 42 1011 1952 75671083 75670136 1.040000e-80 311.0
7 TraesCS6B01G075400 chr6B 100.000 135 0 0 1 135 51731107 51731241 2.300000e-62 250.0
8 TraesCS6B01G075400 chr6B 80.282 213 32 4 2724 2935 60088525 60088322 6.670000e-33 152.0
9 TraesCS6B01G075400 chr6B 77.872 235 41 6 2705 2938 79299871 79299647 6.720000e-28 135.0
10 TraesCS6B01G075400 chr6B 74.425 348 72 13 1790 2132 51332816 51332481 2.420000e-27 134.0
11 TraesCS6B01G075400 chr6B 85.577 104 13 2 1649 1751 51538606 51538708 1.460000e-19 108.0
12 TraesCS6B01G075400 chr6D 91.957 1492 97 12 853 2333 27845203 27846682 0.000000e+00 2069.0
13 TraesCS6B01G075400 chr6D 90.331 1572 104 15 2328 3854 27846721 27848289 0.000000e+00 2017.0
14 TraesCS6B01G075400 chr6D 78.700 1108 166 45 2330 3409 28326075 28325010 0.000000e+00 675.0
15 TraesCS6B01G075400 chr6D 75.975 1128 228 31 1007 2117 28416005 28414904 3.390000e-150 542.0
16 TraesCS6B01G075400 chr6D 83.588 524 67 12 1805 2324 28326642 28326134 1.250000e-129 473.0
17 TraesCS6B01G075400 chr6D 80.475 589 113 2 996 1583 27683726 27683139 2.110000e-122 449.0
18 TraesCS6B01G075400 chr6D 81.952 543 83 9 1637 2178 27711711 27712239 2.730000e-121 446.0
19 TraesCS6B01G075400 chr6D 80.000 585 103 9 995 1577 27711106 27711678 1.660000e-113 420.0
20 TraesCS6B01G075400 chr6D 76.726 507 83 22 1637 2132 27683112 27682630 2.300000e-62 250.0
21 TraesCS6B01G075400 chr6D 72.622 946 190 49 1009 1936 28411425 28410531 8.270000e-62 248.0
22 TraesCS6B01G075400 chr6D 80.808 198 28 4 2724 2920 29222241 29222429 3.100000e-31 147.0
23 TraesCS6B01G075400 chr6D 91.111 45 4 0 2338 2382 29933972 29934016 1.160000e-05 62.1
24 TraesCS6B01G075400 chr6A 92.259 1434 99 8 909 2333 30036552 30035122 0.000000e+00 2023.0
25 TraesCS6B01G075400 chr6A 87.942 1302 92 25 2328 3568 30035083 30033786 0.000000e+00 1474.0
26 TraesCS6B01G075400 chr6A 82.131 582 97 5 990 1566 30422617 30423196 3.460000e-135 492.0
27 TraesCS6B01G075400 chr6A 92.593 270 20 0 3585 3854 30033649 30033380 4.670000e-104 388.0
28 TraesCS6B01G075400 chr6A 80.269 446 78 7 1053 1492 30283398 30282957 1.030000e-85 327.0
29 TraesCS6B01G075400 chr6A 76.285 506 87 21 1637 2132 30423240 30423722 4.980000e-59 239.0
30 TraesCS6B01G075400 chr6A 83.582 201 27 4 1297 1492 30263660 30263461 2.360000e-42 183.0
31 TraesCS6B01G075400 chr6A 77.667 300 59 7 1647 1942 46295802 46295507 3.960000e-40 176.0
32 TraesCS6B01G075400 chr6A 79.343 213 34 4 2724 2935 33185947 33185744 1.440000e-29 141.0
33 TraesCS6B01G075400 chr6A 95.238 42 2 0 2341 2382 32795421 32795380 2.480000e-07 67.6
34 TraesCS6B01G075400 chrUn 74.890 1135 228 39 1007 2117 80234952 80233851 7.540000e-127 464.0
35 TraesCS6B01G075400 chrUn 74.890 1135 228 39 1007 2117 327160411 327161512 7.540000e-127 464.0
36 TraesCS6B01G075400 chrUn 78.444 450 84 11 1017 1458 76751765 76751321 8.150000e-72 281.0
37 TraesCS6B01G075400 chrUn 71.607 1120 259 45 1052 2139 96938029 96939121 6.390000e-63 252.0
38 TraesCS6B01G075400 chrUn 79.724 217 32 6 2704 2919 27971567 27971362 3.100000e-31 147.0
39 TraesCS6B01G075400 chrUn 75.676 296 54 13 1647 1936 286651177 286650894 8.690000e-27 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G075400 chr6B 51731107 51734960 3853 False 3281.0 6312 100.000000 1 3854 2 chr6B.!!$F3 3853
1 TraesCS6B01G075400 chr6B 51559011 51560130 1119 False 538.0 538 75.886000 999 2134 1 chr6B.!!$F1 1135
2 TraesCS6B01G075400 chr6B 52367938 52369487 1549 True 524.0 732 80.257000 1906 3410 2 chr6B.!!$R6 1504
3 TraesCS6B01G075400 chr6B 51435220 51435778 558 True 420.0 420 80.427000 998 1553 1 chr6B.!!$R2 555
4 TraesCS6B01G075400 chr6B 75670136 75671083 947 True 311.0 311 73.354000 1011 1952 1 chr6B.!!$R4 941
5 TraesCS6B01G075400 chr6B 51537979 51538708 729 False 262.0 416 83.845500 994 1751 2 chr6B.!!$F2 757
6 TraesCS6B01G075400 chr6D 27845203 27848289 3086 False 2043.0 2069 91.144000 853 3854 2 chr6D.!!$F4 3001
7 TraesCS6B01G075400 chr6D 28325010 28326642 1632 True 574.0 675 81.144000 1805 3409 2 chr6D.!!$R2 1604
8 TraesCS6B01G075400 chr6D 27711106 27712239 1133 False 433.0 446 80.976000 995 2178 2 chr6D.!!$F3 1183
9 TraesCS6B01G075400 chr6D 28410531 28416005 5474 True 395.0 542 74.298500 1007 2117 2 chr6D.!!$R3 1110
10 TraesCS6B01G075400 chr6D 27682630 27683726 1096 True 349.5 449 78.600500 996 2132 2 chr6D.!!$R1 1136
11 TraesCS6B01G075400 chr6A 30033380 30036552 3172 True 1295.0 2023 90.931333 909 3854 3 chr6A.!!$R6 2945
12 TraesCS6B01G075400 chr6A 30422617 30423722 1105 False 365.5 492 79.208000 990 2132 2 chr6A.!!$F1 1142
13 TraesCS6B01G075400 chrUn 80233851 80234952 1101 True 464.0 464 74.890000 1007 2117 1 chrUn.!!$R3 1110
14 TraesCS6B01G075400 chrUn 327160411 327161512 1101 False 464.0 464 74.890000 1007 2117 1 chrUn.!!$F2 1110
15 TraesCS6B01G075400 chrUn 96938029 96939121 1092 False 252.0 252 71.607000 1052 2139 1 chrUn.!!$F1 1087

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
66 67 0.035317 AGAGTCAAGAACATGCGCCA 59.965 50.0 4.18 0.0 0.00 5.69 F
677 678 0.106116 ACGAGGAGTGGGGATAGGAC 60.106 60.0 0.00 0.0 0.00 3.85 F
832 833 0.318955 TCGACGACGAGGGTTTTTCC 60.319 55.0 5.75 0.0 43.81 3.13 F
833 834 0.319297 CGACGACGAGGGTTTTTCCT 60.319 55.0 0.00 0.0 42.66 3.36 F
2178 2266 0.037326 TCTGTCCGGATGCTTGTGTC 60.037 55.0 7.81 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1559 1599 0.031716 TGAGATGAGAGGACCCCAGG 60.032 60.000 0.00 0.0 0.00 4.45 R
1630 1677 0.935196 ACAGACGACAAGCCGAAAAC 59.065 50.000 0.00 0.0 0.00 2.43 R
2015 2082 1.095600 AAGCTGCAGCATGATGACAG 58.904 50.000 38.24 22.7 45.16 3.51 R
2805 4652 1.203038 TCATGTCCACCACCAATGCTT 60.203 47.619 0.00 0.0 0.00 3.91 R
3574 7091 0.524862 CTGTGTTGGAGCTGATTGGC 59.475 55.000 0.00 0.0 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.338539 ACCGACGTCACCGCAGAC 62.339 66.667 17.16 0.00 37.70 3.51
29 30 4.821589 GCAGACGGGCGGAAGGAG 62.822 72.222 0.00 0.00 0.00 3.69
30 31 4.821589 CAGACGGGCGGAAGGAGC 62.822 72.222 0.00 0.00 0.00 4.70
35 36 4.176752 GGGCGGAAGGAGCGGAAT 62.177 66.667 0.00 0.00 35.00 3.01
36 37 2.124695 GGCGGAAGGAGCGGAATT 60.125 61.111 0.00 0.00 35.00 2.17
37 38 1.749258 GGCGGAAGGAGCGGAATTT 60.749 57.895 0.00 0.00 35.00 1.82
38 39 1.715862 GGCGGAAGGAGCGGAATTTC 61.716 60.000 0.00 0.00 35.00 2.17
39 40 2.006772 CGGAAGGAGCGGAATTTCG 58.993 57.895 0.39 0.39 0.00 3.46
40 41 1.429148 CGGAAGGAGCGGAATTTCGG 61.429 60.000 8.51 0.00 0.00 4.30
41 42 1.095807 GGAAGGAGCGGAATTTCGGG 61.096 60.000 8.51 0.00 0.00 5.14
42 43 1.715862 GAAGGAGCGGAATTTCGGGC 61.716 60.000 8.51 4.84 0.00 6.13
43 44 3.209812 GGAGCGGAATTTCGGGCC 61.210 66.667 8.51 0.00 0.00 5.80
44 45 3.209812 GAGCGGAATTTCGGGCCC 61.210 66.667 13.57 13.57 0.00 5.80
45 46 4.815108 AGCGGAATTTCGGGCCCC 62.815 66.667 18.66 0.00 0.00 5.80
46 47 4.815108 GCGGAATTTCGGGCCCCT 62.815 66.667 18.66 0.00 0.00 4.79
47 48 2.912714 CGGAATTTCGGGCCCCTA 59.087 61.111 18.66 0.46 0.00 3.53
48 49 1.227853 CGGAATTTCGGGCCCCTAG 60.228 63.158 18.66 1.52 0.00 3.02
49 50 1.692173 CGGAATTTCGGGCCCCTAGA 61.692 60.000 18.66 4.64 0.00 2.43
50 51 0.108774 GGAATTTCGGGCCCCTAGAG 59.891 60.000 18.66 0.58 0.00 2.43
51 52 0.837940 GAATTTCGGGCCCCTAGAGT 59.162 55.000 18.66 0.00 0.00 3.24
52 53 0.837940 AATTTCGGGCCCCTAGAGTC 59.162 55.000 18.66 0.00 0.00 3.36
53 54 0.326238 ATTTCGGGCCCCTAGAGTCA 60.326 55.000 18.66 0.00 0.00 3.41
54 55 0.545787 TTTCGGGCCCCTAGAGTCAA 60.546 55.000 18.66 0.00 0.00 3.18
55 56 0.976073 TTCGGGCCCCTAGAGTCAAG 60.976 60.000 18.66 0.00 0.00 3.02
56 57 1.381327 CGGGCCCCTAGAGTCAAGA 60.381 63.158 18.66 0.00 0.00 3.02
57 58 0.976073 CGGGCCCCTAGAGTCAAGAA 60.976 60.000 18.66 0.00 0.00 2.52
58 59 0.542333 GGGCCCCTAGAGTCAAGAAC 59.458 60.000 12.23 0.00 0.00 3.01
59 60 1.276622 GGCCCCTAGAGTCAAGAACA 58.723 55.000 0.00 0.00 0.00 3.18
60 61 1.840635 GGCCCCTAGAGTCAAGAACAT 59.159 52.381 0.00 0.00 0.00 2.71
61 62 2.420687 GGCCCCTAGAGTCAAGAACATG 60.421 54.545 0.00 0.00 0.00 3.21
62 63 2.911484 CCCCTAGAGTCAAGAACATGC 58.089 52.381 0.00 0.00 0.00 4.06
63 64 2.544685 CCCTAGAGTCAAGAACATGCG 58.455 52.381 0.00 0.00 0.00 4.73
64 65 1.929836 CCTAGAGTCAAGAACATGCGC 59.070 52.381 0.00 0.00 0.00 6.09
65 66 1.929836 CTAGAGTCAAGAACATGCGCC 59.070 52.381 4.18 0.00 0.00 6.53
66 67 0.035317 AGAGTCAAGAACATGCGCCA 59.965 50.000 4.18 0.00 0.00 5.69
67 68 0.166814 GAGTCAAGAACATGCGCCAC 59.833 55.000 4.18 0.00 0.00 5.01
68 69 1.210155 GTCAAGAACATGCGCCACC 59.790 57.895 4.18 0.00 0.00 4.61
69 70 2.176546 CAAGAACATGCGCCACCG 59.823 61.111 4.18 0.00 37.57 4.94
117 118 4.538283 CGAGCGACGCCACGAGAT 62.538 66.667 25.18 3.26 32.69 2.75
118 119 2.202623 GAGCGACGCCACGAGATT 60.203 61.111 17.79 0.00 35.09 2.40
119 120 2.507102 AGCGACGCCACGAGATTG 60.507 61.111 17.79 0.00 35.09 2.67
120 121 4.210304 GCGACGCCACGAGATTGC 62.210 66.667 9.14 0.00 35.09 3.56
121 122 3.554692 CGACGCCACGAGATTGCC 61.555 66.667 0.00 0.00 35.09 4.52
122 123 3.554692 GACGCCACGAGATTGCCG 61.555 66.667 0.00 0.00 0.00 5.69
127 128 4.812476 CACGAGATTGCCGCCGGA 62.812 66.667 7.68 0.00 0.00 5.14
128 129 4.814294 ACGAGATTGCCGCCGGAC 62.814 66.667 7.68 0.00 0.00 4.79
130 131 4.467084 GAGATTGCCGCCGGACCA 62.467 66.667 7.68 0.00 0.00 4.02
131 132 3.969250 GAGATTGCCGCCGGACCAA 62.969 63.158 7.68 2.26 0.00 3.67
132 133 3.810896 GATTGCCGCCGGACCAAC 61.811 66.667 7.68 0.00 0.00 3.77
462 463 2.742372 CCACGCCGACAAGGGAAG 60.742 66.667 0.00 0.00 41.48 3.46
463 464 2.742372 CACGCCGACAAGGGAAGG 60.742 66.667 0.00 0.00 41.48 3.46
464 465 2.920912 ACGCCGACAAGGGAAGGA 60.921 61.111 0.00 0.00 41.48 3.36
465 466 2.125512 CGCCGACAAGGGAAGGAG 60.126 66.667 0.00 0.00 41.48 3.69
466 467 2.646175 CGCCGACAAGGGAAGGAGA 61.646 63.158 0.00 0.00 41.48 3.71
467 468 1.219393 GCCGACAAGGGAAGGAGAG 59.781 63.158 0.00 0.00 41.48 3.20
468 469 1.901085 CCGACAAGGGAAGGAGAGG 59.099 63.158 0.00 0.00 35.97 3.69
469 470 1.617947 CCGACAAGGGAAGGAGAGGG 61.618 65.000 0.00 0.00 35.97 4.30
470 471 0.614979 CGACAAGGGAAGGAGAGGGA 60.615 60.000 0.00 0.00 0.00 4.20
471 472 1.886422 GACAAGGGAAGGAGAGGGAT 58.114 55.000 0.00 0.00 0.00 3.85
472 473 1.488393 GACAAGGGAAGGAGAGGGATG 59.512 57.143 0.00 0.00 0.00 3.51
473 474 0.842635 CAAGGGAAGGAGAGGGATGG 59.157 60.000 0.00 0.00 0.00 3.51
474 475 0.327964 AAGGGAAGGAGAGGGATGGG 60.328 60.000 0.00 0.00 0.00 4.00
475 476 1.772156 GGGAAGGAGAGGGATGGGG 60.772 68.421 0.00 0.00 0.00 4.96
476 477 1.772156 GGAAGGAGAGGGATGGGGG 60.772 68.421 0.00 0.00 0.00 5.40
477 478 1.004891 GAAGGAGAGGGATGGGGGT 59.995 63.158 0.00 0.00 0.00 4.95
478 479 1.004891 AAGGAGAGGGATGGGGGTC 59.995 63.158 0.00 0.00 0.00 4.46
479 480 2.844839 GGAGAGGGATGGGGGTCG 60.845 72.222 0.00 0.00 0.00 4.79
480 481 2.282446 GAGAGGGATGGGGGTCGA 59.718 66.667 0.00 0.00 0.00 4.20
481 482 1.834822 GAGAGGGATGGGGGTCGAG 60.835 68.421 0.00 0.00 0.00 4.04
482 483 2.844839 GAGGGATGGGGGTCGAGG 60.845 72.222 0.00 0.00 0.00 4.63
483 484 3.695825 AGGGATGGGGGTCGAGGT 61.696 66.667 0.00 0.00 0.00 3.85
484 485 3.480133 GGGATGGGGGTCGAGGTG 61.480 72.222 0.00 0.00 0.00 4.00
485 486 3.480133 GGATGGGGGTCGAGGTGG 61.480 72.222 0.00 0.00 0.00 4.61
486 487 4.176752 GATGGGGGTCGAGGTGGC 62.177 72.222 0.00 0.00 0.00 5.01
507 508 3.677648 CACAGGCAGCCCAAGCAC 61.678 66.667 8.22 0.00 43.56 4.40
508 509 4.982701 ACAGGCAGCCCAAGCACC 62.983 66.667 8.22 0.00 43.56 5.01
535 536 3.052082 CACTCTGCCAGGCGGTTG 61.052 66.667 20.46 15.83 36.18 3.77
599 600 4.824515 CCTCGGCTCGGTCCTCCT 62.825 72.222 0.00 0.00 0.00 3.69
600 601 3.213402 CTCGGCTCGGTCCTCCTC 61.213 72.222 0.00 0.00 0.00 3.71
601 602 4.816984 TCGGCTCGGTCCTCCTCC 62.817 72.222 0.00 0.00 0.00 4.30
623 624 3.072468 CCCAATGGCCCAGCACAG 61.072 66.667 0.00 0.00 0.00 3.66
624 625 3.072468 CCAATGGCCCAGCACAGG 61.072 66.667 0.00 0.00 0.00 4.00
636 637 4.473520 CACAGGCGGCTCGGGAAT 62.474 66.667 9.32 0.00 0.00 3.01
637 638 4.473520 ACAGGCGGCTCGGGAATG 62.474 66.667 9.32 0.00 0.00 2.67
641 642 4.918201 GCGGCTCGGGAATGGGAG 62.918 72.222 0.00 0.00 0.00 4.30
642 643 4.241555 CGGCTCGGGAATGGGAGG 62.242 72.222 0.00 0.00 0.00 4.30
643 644 2.768344 GGCTCGGGAATGGGAGGA 60.768 66.667 0.00 0.00 0.00 3.71
644 645 2.812619 GGCTCGGGAATGGGAGGAG 61.813 68.421 0.00 0.00 0.00 3.69
645 646 2.812619 GCTCGGGAATGGGAGGAGG 61.813 68.421 0.00 0.00 0.00 4.30
646 647 2.040884 TCGGGAATGGGAGGAGGG 60.041 66.667 0.00 0.00 0.00 4.30
647 648 3.171388 CGGGAATGGGAGGAGGGG 61.171 72.222 0.00 0.00 0.00 4.79
648 649 2.778717 GGGAATGGGAGGAGGGGG 60.779 72.222 0.00 0.00 0.00 5.40
649 650 2.044620 GGAATGGGAGGAGGGGGT 59.955 66.667 0.00 0.00 0.00 4.95
650 651 2.386935 GGAATGGGAGGAGGGGGTG 61.387 68.421 0.00 0.00 0.00 4.61
651 652 1.619669 GAATGGGAGGAGGGGGTGT 60.620 63.158 0.00 0.00 0.00 4.16
652 653 1.619669 AATGGGAGGAGGGGGTGTC 60.620 63.158 0.00 0.00 0.00 3.67
653 654 2.431047 AATGGGAGGAGGGGGTGTCA 62.431 60.000 0.00 0.00 0.00 3.58
654 655 3.009714 GGGAGGAGGGGGTGTCAC 61.010 72.222 0.00 0.00 0.00 3.67
655 656 3.391382 GGAGGAGGGGGTGTCACG 61.391 72.222 0.00 0.00 0.00 4.35
656 657 2.283676 GAGGAGGGGGTGTCACGA 60.284 66.667 0.00 0.00 0.00 4.35
657 658 2.283966 AGGAGGGGGTGTCACGAG 60.284 66.667 0.00 0.00 0.00 4.18
658 659 2.283676 GGAGGGGGTGTCACGAGA 60.284 66.667 0.00 0.00 0.00 4.04
659 660 2.647158 GGAGGGGGTGTCACGAGAC 61.647 68.421 6.00 6.00 45.19 3.36
668 669 1.502640 GTCACGAGACGAGGAGTGG 59.497 63.158 0.00 0.00 34.60 4.00
669 670 1.674651 TCACGAGACGAGGAGTGGG 60.675 63.158 0.00 0.00 35.50 4.61
670 671 2.361357 ACGAGACGAGGAGTGGGG 60.361 66.667 0.00 0.00 0.00 4.96
671 672 2.045242 CGAGACGAGGAGTGGGGA 60.045 66.667 0.00 0.00 0.00 4.81
672 673 1.454111 CGAGACGAGGAGTGGGGAT 60.454 63.158 0.00 0.00 0.00 3.85
673 674 0.179026 CGAGACGAGGAGTGGGGATA 60.179 60.000 0.00 0.00 0.00 2.59
674 675 1.611519 GAGACGAGGAGTGGGGATAG 58.388 60.000 0.00 0.00 0.00 2.08
675 676 0.186386 AGACGAGGAGTGGGGATAGG 59.814 60.000 0.00 0.00 0.00 2.57
676 677 0.185416 GACGAGGAGTGGGGATAGGA 59.815 60.000 0.00 0.00 0.00 2.94
677 678 0.106116 ACGAGGAGTGGGGATAGGAC 60.106 60.000 0.00 0.00 0.00 3.85
678 679 1.173444 CGAGGAGTGGGGATAGGACG 61.173 65.000 0.00 0.00 0.00 4.79
679 680 0.828343 GAGGAGTGGGGATAGGACGG 60.828 65.000 0.00 0.00 0.00 4.79
680 681 1.837499 GGAGTGGGGATAGGACGGG 60.837 68.421 0.00 0.00 0.00 5.28
681 682 1.837499 GAGTGGGGATAGGACGGGG 60.837 68.421 0.00 0.00 0.00 5.73
682 683 2.284493 GTGGGGATAGGACGGGGA 59.716 66.667 0.00 0.00 0.00 4.81
683 684 2.138831 GTGGGGATAGGACGGGGAC 61.139 68.421 0.00 0.00 0.00 4.46
726 727 4.779733 GGGAGGAGCCGGTGAGGA 62.780 72.222 1.90 0.00 45.00 3.71
727 728 2.683933 GGAGGAGCCGGTGAGGAA 60.684 66.667 1.90 0.00 45.00 3.36
728 729 2.726351 GGAGGAGCCGGTGAGGAAG 61.726 68.421 1.90 0.00 45.00 3.46
729 730 2.685380 AGGAGCCGGTGAGGAAGG 60.685 66.667 1.90 0.00 45.00 3.46
730 731 3.787001 GGAGCCGGTGAGGAAGGG 61.787 72.222 1.90 0.00 45.00 3.95
731 732 2.683933 GAGCCGGTGAGGAAGGGA 60.684 66.667 1.90 0.00 45.00 4.20
732 733 3.003763 AGCCGGTGAGGAAGGGAC 61.004 66.667 1.90 0.00 45.00 4.46
733 734 4.452733 GCCGGTGAGGAAGGGACG 62.453 72.222 1.90 0.00 45.00 4.79
734 735 2.995574 CCGGTGAGGAAGGGACGT 60.996 66.667 0.00 0.00 45.00 4.34
735 736 2.580601 CCGGTGAGGAAGGGACGTT 61.581 63.158 0.00 0.00 45.00 3.99
736 737 1.080025 CGGTGAGGAAGGGACGTTC 60.080 63.158 0.00 0.00 0.00 3.95
737 738 1.080025 GGTGAGGAAGGGACGTTCG 60.080 63.158 0.00 0.00 0.00 3.95
738 739 1.080025 GTGAGGAAGGGACGTTCGG 60.080 63.158 0.00 0.00 0.00 4.30
739 740 2.125633 GAGGAAGGGACGTTCGGC 60.126 66.667 0.00 0.00 0.00 5.54
741 742 4.060038 GGAAGGGACGTTCGGCGA 62.060 66.667 4.99 4.99 44.77 5.54
742 743 2.808321 GAAGGGACGTTCGGCGAC 60.808 66.667 10.16 4.06 44.77 5.19
781 782 4.099170 CGACGACGAGAACGCCCT 62.099 66.667 0.00 0.00 43.96 5.19
782 783 2.504244 GACGACGAGAACGCCCTG 60.504 66.667 0.00 0.00 43.96 4.45
783 784 3.966026 GACGACGAGAACGCCCTGG 62.966 68.421 0.00 0.00 43.96 4.45
787 788 4.473520 CGAGAACGCCCTGGCCAT 62.474 66.667 5.51 0.00 37.98 4.40
788 789 2.514824 GAGAACGCCCTGGCCATC 60.515 66.667 5.51 0.00 37.98 3.51
789 790 4.473520 AGAACGCCCTGGCCATCG 62.474 66.667 5.51 13.35 37.98 3.84
799 800 4.235762 GGCCATCGCGCTCCCTAA 62.236 66.667 5.56 0.00 35.02 2.69
800 801 2.203015 GCCATCGCGCTCCCTAAA 60.203 61.111 5.56 0.00 0.00 1.85
801 802 1.817941 GCCATCGCGCTCCCTAAAA 60.818 57.895 5.56 0.00 0.00 1.52
802 803 1.373590 GCCATCGCGCTCCCTAAAAA 61.374 55.000 5.56 0.00 0.00 1.94
831 832 3.184094 TCGACGACGAGGGTTTTTC 57.816 52.632 5.75 0.00 43.81 2.29
832 833 0.318955 TCGACGACGAGGGTTTTTCC 60.319 55.000 5.75 0.00 43.81 3.13
833 834 0.319297 CGACGACGAGGGTTTTTCCT 60.319 55.000 0.00 0.00 42.66 3.36
834 835 1.870993 CGACGACGAGGGTTTTTCCTT 60.871 52.381 0.00 0.00 42.66 3.36
835 836 2.216046 GACGACGAGGGTTTTTCCTTT 58.784 47.619 0.00 0.00 37.25 3.11
836 837 2.615447 GACGACGAGGGTTTTTCCTTTT 59.385 45.455 0.00 0.00 37.25 2.27
837 838 3.018856 ACGACGAGGGTTTTTCCTTTTT 58.981 40.909 0.00 0.00 37.25 1.94
866 867 3.445096 TGCTGATGAGATCACGAGAAGAA 59.555 43.478 0.00 0.00 35.06 2.52
891 892 2.993264 CCCGTGACCCGTGTAGGT 60.993 66.667 0.00 0.00 45.12 3.08
892 893 2.576832 CCCGTGACCCGTGTAGGTT 61.577 63.158 0.00 0.00 41.42 3.50
893 894 1.080298 CCGTGACCCGTGTAGGTTC 60.080 63.158 0.00 0.00 41.42 3.62
895 896 0.388134 CGTGACCCGTGTAGGTTCTG 60.388 60.000 0.00 0.00 41.42 3.02
897 898 0.963962 TGACCCGTGTAGGTTCTGTC 59.036 55.000 0.00 0.00 41.42 3.51
899 900 1.617357 GACCCGTGTAGGTTCTGTCTT 59.383 52.381 0.00 0.00 41.42 3.01
900 901 1.617357 ACCCGTGTAGGTTCTGTCTTC 59.383 52.381 0.00 0.00 36.44 2.87
901 902 1.893801 CCCGTGTAGGTTCTGTCTTCT 59.106 52.381 0.00 0.00 38.74 2.85
902 903 2.299297 CCCGTGTAGGTTCTGTCTTCTT 59.701 50.000 0.00 0.00 38.74 2.52
903 904 3.318017 CCGTGTAGGTTCTGTCTTCTTG 58.682 50.000 0.00 0.00 34.51 3.02
904 905 3.243771 CCGTGTAGGTTCTGTCTTCTTGT 60.244 47.826 0.00 0.00 34.51 3.16
905 906 3.736252 CGTGTAGGTTCTGTCTTCTTGTG 59.264 47.826 0.00 0.00 0.00 3.33
906 907 4.694339 GTGTAGGTTCTGTCTTCTTGTGT 58.306 43.478 0.00 0.00 0.00 3.72
907 908 5.506815 CGTGTAGGTTCTGTCTTCTTGTGTA 60.507 44.000 0.00 0.00 0.00 2.90
931 932 0.460311 ACTTATCGTGGGCTTCCTCG 59.540 55.000 0.00 0.00 45.70 4.63
957 958 1.078708 TTTCGATCTCGCCCCAACC 60.079 57.895 0.00 0.00 39.60 3.77
1132 1146 2.750637 GCCTCCTCGTCTCCGACA 60.751 66.667 0.00 0.00 38.40 4.35
1136 1150 0.464735 CTCCTCGTCTCCGACATCCT 60.465 60.000 0.00 0.00 38.40 3.24
1239 1253 2.124736 ACGCCCACCATGGATTCG 60.125 61.111 21.47 17.32 40.96 3.34
1284 1298 2.547826 CTCTCATTGCAGCTCATCGAA 58.452 47.619 0.00 0.00 0.00 3.71
1559 1599 2.262471 TACTCGTCGGAGAAAGGCGC 62.262 60.000 0.00 0.00 43.27 6.53
1567 1608 3.978571 GAGAAAGGCGCCTGGGGTC 62.979 68.421 33.60 23.72 0.00 4.46
1593 1637 3.074390 TCATCTCACCACTGGTTCCATTT 59.926 43.478 0.00 0.00 31.02 2.32
1608 1652 6.164176 GGTTCCATTTGAGGGATATACTACG 58.836 44.000 0.00 0.00 33.63 3.51
1622 1669 8.033626 GGGATATACTACGAAGGGTATTTTCAG 58.966 40.741 0.00 0.00 33.97 3.02
1630 1677 5.296780 ACGAAGGGTATTTTCAGCATGTATG 59.703 40.000 0.00 0.00 37.40 2.39
1635 1682 7.547227 AGGGTATTTTCAGCATGTATGTTTTC 58.453 34.615 0.00 0.00 37.40 2.29
1815 1862 2.203938 GAGGGTGGTGGACTGGGA 60.204 66.667 0.00 0.00 0.00 4.37
1868 1921 8.115490 CAATTATGGAAGAGAAAGACTGGTTT 57.885 34.615 0.00 0.00 0.00 3.27
2015 2082 2.015736 CTGACTACAGGTGGTGATGC 57.984 55.000 0.00 0.00 40.14 3.91
2068 2136 9.630098 TGCAATTCAAGAAATTTTATGAGACTC 57.370 29.630 0.00 0.00 35.32 3.36
2135 2209 4.036380 AGGTAATAGCATTGCCTTTAACGC 59.964 41.667 4.70 0.00 29.99 4.84
2178 2266 0.037326 TCTGTCCGGATGCTTGTGTC 60.037 55.000 7.81 0.00 0.00 3.67
2188 2336 3.309954 GGATGCTTGTGTCTCGGTATTTC 59.690 47.826 0.00 0.00 0.00 2.17
2197 2345 9.476202 CTTGTGTCTCGGTATTTCATATAATGA 57.524 33.333 0.00 0.00 37.55 2.57
2473 4298 4.112634 ACATTTTTCAAGGGCTAGGTGA 57.887 40.909 0.00 0.00 0.00 4.02
2491 4316 6.319048 AGGTGAGTTCCATATTTGTCATCT 57.681 37.500 0.00 0.00 0.00 2.90
2556 4381 5.281693 GGAAATTTTCCTTTGGAATTGCG 57.718 39.130 19.01 0.00 46.57 4.85
2600 4425 2.554344 GGGCCTATGTGTTCCAACTTGA 60.554 50.000 0.84 0.00 0.00 3.02
2605 4430 5.702865 CCTATGTGTTCCAACTTGACATTG 58.297 41.667 0.00 0.00 29.43 2.82
2611 4436 4.218200 TGTTCCAACTTGACATTGCTATGG 59.782 41.667 12.77 0.00 36.01 2.74
2612 4437 2.754552 TCCAACTTGACATTGCTATGGC 59.245 45.455 12.77 10.12 40.45 4.40
2626 4453 3.128349 GCTATGGCCTTTGCATGATTTG 58.872 45.455 17.99 0.00 40.13 2.32
2634 4461 5.048573 GGCCTTTGCATGATTTGTTTTTGAT 60.049 36.000 0.00 0.00 40.13 2.57
2675 4502 2.635915 TCTGAACCGAAGAAGCCCTTAA 59.364 45.455 0.00 0.00 34.68 1.85
2735 4563 3.557228 ATCTTCAGTGATGCCTTCTCC 57.443 47.619 0.00 0.00 0.00 3.71
2805 4652 4.530553 TGACTTCTTATGCTTGTAGGGACA 59.469 41.667 0.00 0.00 0.00 4.02
2836 4683 2.422519 GGTGGACATGATGGAGCTGAAT 60.423 50.000 0.00 0.00 0.00 2.57
2879 4726 8.976353 AGATGATTGTCTGGGTAGATATATCAC 58.024 37.037 15.08 10.27 34.94 3.06
2904 4751 5.860941 TGATTTTTGGTTGAGCAGGTAAA 57.139 34.783 0.00 0.00 0.00 2.01
2926 4773 5.496133 ACATATCTTCTGCATGCAAGTTC 57.504 39.130 22.88 0.00 0.00 3.01
2988 4836 7.724061 TGCTTTCCTTTTTACTACCATTTCTCT 59.276 33.333 0.00 0.00 0.00 3.10
3031 4953 0.830648 TATTGTGGGCTCTTCTCCCG 59.169 55.000 0.00 0.00 46.92 5.14
3036 4958 1.455959 GGGCTCTTCTCCCGCTAGA 60.456 63.158 0.00 0.00 33.43 2.43
3186 5134 7.519809 GCCATCGTTATGTGCTTACATCATTAA 60.520 37.037 0.00 0.00 0.00 1.40
3216 5164 1.754803 TCCTTATAGGCCAGACACACG 59.245 52.381 5.01 0.00 34.61 4.49
3227 5175 0.659417 AGACACACGTGACGCTTACG 60.659 55.000 25.01 5.33 46.31 3.18
3234 5182 2.357760 TGACGCTTACGGTTGGGC 60.358 61.111 0.00 0.00 46.04 5.36
3244 5192 2.043349 GGTTGGGCCCCGCTTAAT 60.043 61.111 22.27 0.00 0.00 1.40
3251 5199 1.826096 GGGCCCCGCTTAATTTAACAA 59.174 47.619 12.23 0.00 0.00 2.83
3252 5200 2.159156 GGGCCCCGCTTAATTTAACAAG 60.159 50.000 12.23 0.00 0.00 3.16
3263 5220 2.892373 TTTAACAAGCTTCGCCATCG 57.108 45.000 0.00 0.00 0.00 3.84
3282 5239 4.355543 TCGTTATTCGCGTACCTAACTT 57.644 40.909 5.77 0.00 39.67 2.66
3288 5249 0.037975 CGCGTACCTAACTTGGTGGT 60.038 55.000 0.00 0.00 41.05 4.16
3300 5261 2.116125 GGTGGTGCCCTTGCTCTT 59.884 61.111 0.00 0.00 38.71 2.85
3304 5265 2.171003 GTGGTGCCCTTGCTCTTTTAT 58.829 47.619 0.00 0.00 38.71 1.40
3325 5291 1.066502 GTCTTCTCCTCTGTTCTGGCC 60.067 57.143 0.00 0.00 0.00 5.36
3463 6774 0.031043 TTTCTTGACGAGTCGCCGAA 59.969 50.000 13.59 7.32 0.00 4.30
3464 6775 0.031043 TTCTTGACGAGTCGCCGAAA 59.969 50.000 13.59 1.10 0.00 3.46
3472 6783 1.724623 CGAGTCGCCGAAAAAGAATCA 59.275 47.619 0.00 0.00 0.00 2.57
3492 6803 2.836981 CACTTCAGGTCTGGATTCTCCT 59.163 50.000 0.00 0.00 37.46 3.69
3541 6943 4.082523 ACGGGATGGACGGCACTG 62.083 66.667 0.00 0.00 35.23 3.66
3574 7091 6.511416 CAGTTCCAAGAGATATACCACTGAG 58.489 44.000 0.00 0.00 32.52 3.35
3796 7407 2.880890 GTCCAGTTGCACTTGACATTCT 59.119 45.455 12.49 0.00 39.76 2.40
3829 7440 1.532437 TCAGCTTCAGTTGATGTTGCG 59.468 47.619 6.89 0.00 34.87 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.821589 CTCCTTCCGCCCGTCTGC 62.822 72.222 0.00 0.00 0.00 4.26
13 14 4.821589 GCTCCTTCCGCCCGTCTG 62.822 72.222 0.00 0.00 0.00 3.51
18 19 3.699134 AATTCCGCTCCTTCCGCCC 62.699 63.158 0.00 0.00 0.00 6.13
19 20 1.715862 GAAATTCCGCTCCTTCCGCC 61.716 60.000 0.00 0.00 0.00 6.13
20 21 1.722082 GAAATTCCGCTCCTTCCGC 59.278 57.895 0.00 0.00 0.00 5.54
21 22 1.429148 CCGAAATTCCGCTCCTTCCG 61.429 60.000 0.00 0.00 0.00 4.30
22 23 1.095807 CCCGAAATTCCGCTCCTTCC 61.096 60.000 0.00 0.00 0.00 3.46
23 24 1.715862 GCCCGAAATTCCGCTCCTTC 61.716 60.000 0.00 0.00 0.00 3.46
24 25 1.749258 GCCCGAAATTCCGCTCCTT 60.749 57.895 0.00 0.00 0.00 3.36
25 26 2.124695 GCCCGAAATTCCGCTCCT 60.125 61.111 0.00 0.00 0.00 3.69
26 27 3.209812 GGCCCGAAATTCCGCTCC 61.210 66.667 0.00 0.00 0.00 4.70
27 28 3.209812 GGGCCCGAAATTCCGCTC 61.210 66.667 5.69 0.00 0.00 5.03
28 29 4.815108 GGGGCCCGAAATTCCGCT 62.815 66.667 17.79 0.00 0.00 5.52
29 30 3.409605 TAGGGGCCCGAAATTCCGC 62.410 63.158 18.95 0.00 0.00 5.54
30 31 1.227853 CTAGGGGCCCGAAATTCCG 60.228 63.158 18.95 0.00 0.00 4.30
31 32 0.108774 CTCTAGGGGCCCGAAATTCC 59.891 60.000 18.95 0.00 0.00 3.01
32 33 0.837940 ACTCTAGGGGCCCGAAATTC 59.162 55.000 18.95 0.00 0.00 2.17
33 34 0.837940 GACTCTAGGGGCCCGAAATT 59.162 55.000 18.95 0.66 0.00 1.82
34 35 0.326238 TGACTCTAGGGGCCCGAAAT 60.326 55.000 18.95 1.12 0.00 2.17
35 36 0.545787 TTGACTCTAGGGGCCCGAAA 60.546 55.000 18.95 5.98 0.00 3.46
36 37 0.976073 CTTGACTCTAGGGGCCCGAA 60.976 60.000 18.95 8.89 0.00 4.30
37 38 1.381327 CTTGACTCTAGGGGCCCGA 60.381 63.158 18.95 11.97 0.00 5.14
38 39 0.976073 TTCTTGACTCTAGGGGCCCG 60.976 60.000 18.95 5.08 0.00 6.13
39 40 0.542333 GTTCTTGACTCTAGGGGCCC 59.458 60.000 17.12 17.12 0.00 5.80
40 41 1.276622 TGTTCTTGACTCTAGGGGCC 58.723 55.000 0.00 0.00 0.00 5.80
41 42 2.911484 CATGTTCTTGACTCTAGGGGC 58.089 52.381 0.00 0.00 0.00 5.80
42 43 2.739932 CGCATGTTCTTGACTCTAGGGG 60.740 54.545 0.00 0.00 0.00 4.79
43 44 2.544685 CGCATGTTCTTGACTCTAGGG 58.455 52.381 0.00 0.00 0.00 3.53
44 45 1.929836 GCGCATGTTCTTGACTCTAGG 59.070 52.381 0.30 0.00 0.00 3.02
45 46 1.929836 GGCGCATGTTCTTGACTCTAG 59.070 52.381 10.83 0.00 0.00 2.43
46 47 1.275010 TGGCGCATGTTCTTGACTCTA 59.725 47.619 10.83 0.00 0.00 2.43
47 48 0.035317 TGGCGCATGTTCTTGACTCT 59.965 50.000 10.83 0.00 0.00 3.24
48 49 0.166814 GTGGCGCATGTTCTTGACTC 59.833 55.000 10.83 0.00 0.00 3.36
49 50 1.237285 GGTGGCGCATGTTCTTGACT 61.237 55.000 10.83 0.00 0.00 3.41
50 51 1.210155 GGTGGCGCATGTTCTTGAC 59.790 57.895 10.83 0.00 0.00 3.18
51 52 2.324330 CGGTGGCGCATGTTCTTGA 61.324 57.895 10.83 0.00 0.00 3.02
52 53 2.176546 CGGTGGCGCATGTTCTTG 59.823 61.111 10.83 0.00 0.00 3.02
53 54 3.737172 GCGGTGGCGCATGTTCTT 61.737 61.111 10.83 0.00 34.62 2.52
80 81 4.389576 GGTGCTTCGCTGCCGTTG 62.390 66.667 0.00 0.00 35.54 4.10
100 101 4.538283 ATCTCGTGGCGTCGCTCG 62.538 66.667 18.11 20.43 43.12 5.03
101 102 2.202623 AATCTCGTGGCGTCGCTC 60.203 61.111 18.11 7.95 0.00 5.03
102 103 2.507102 CAATCTCGTGGCGTCGCT 60.507 61.111 18.11 0.00 0.00 4.93
103 104 4.210304 GCAATCTCGTGGCGTCGC 62.210 66.667 9.22 9.22 0.00 5.19
104 105 3.554692 GGCAATCTCGTGGCGTCG 61.555 66.667 0.00 0.00 34.03 5.12
110 111 4.812476 TCCGGCGGCAATCTCGTG 62.812 66.667 23.83 0.00 0.00 4.35
111 112 4.814294 GTCCGGCGGCAATCTCGT 62.814 66.667 23.83 0.00 0.00 4.18
113 114 3.969250 TTGGTCCGGCGGCAATCTC 62.969 63.158 23.83 7.03 0.00 2.75
114 115 4.028490 TTGGTCCGGCGGCAATCT 62.028 61.111 23.83 0.00 0.00 2.40
115 116 3.810896 GTTGGTCCGGCGGCAATC 61.811 66.667 23.83 5.89 0.00 2.67
445 446 2.742372 CTTCCCTTGTCGGCGTGG 60.742 66.667 6.85 5.43 0.00 4.94
446 447 2.742372 CCTTCCCTTGTCGGCGTG 60.742 66.667 6.85 0.00 0.00 5.34
447 448 2.920912 TCCTTCCCTTGTCGGCGT 60.921 61.111 6.85 0.00 0.00 5.68
448 449 2.125512 CTCCTTCCCTTGTCGGCG 60.126 66.667 0.00 0.00 0.00 6.46
449 450 1.219393 CTCTCCTTCCCTTGTCGGC 59.781 63.158 0.00 0.00 0.00 5.54
450 451 1.617947 CCCTCTCCTTCCCTTGTCGG 61.618 65.000 0.00 0.00 0.00 4.79
451 452 0.614979 TCCCTCTCCTTCCCTTGTCG 60.615 60.000 0.00 0.00 0.00 4.35
452 453 1.488393 CATCCCTCTCCTTCCCTTGTC 59.512 57.143 0.00 0.00 0.00 3.18
453 454 1.589414 CATCCCTCTCCTTCCCTTGT 58.411 55.000 0.00 0.00 0.00 3.16
454 455 0.842635 CCATCCCTCTCCTTCCCTTG 59.157 60.000 0.00 0.00 0.00 3.61
455 456 0.327964 CCCATCCCTCTCCTTCCCTT 60.328 60.000 0.00 0.00 0.00 3.95
456 457 1.319799 CCCATCCCTCTCCTTCCCT 59.680 63.158 0.00 0.00 0.00 4.20
457 458 1.772156 CCCCATCCCTCTCCTTCCC 60.772 68.421 0.00 0.00 0.00 3.97
458 459 1.772156 CCCCCATCCCTCTCCTTCC 60.772 68.421 0.00 0.00 0.00 3.46
459 460 1.004891 ACCCCCATCCCTCTCCTTC 59.995 63.158 0.00 0.00 0.00 3.46
460 461 1.004891 GACCCCCATCCCTCTCCTT 59.995 63.158 0.00 0.00 0.00 3.36
461 462 2.706071 GACCCCCATCCCTCTCCT 59.294 66.667 0.00 0.00 0.00 3.69
462 463 2.844839 CGACCCCCATCCCTCTCC 60.845 72.222 0.00 0.00 0.00 3.71
463 464 1.834822 CTCGACCCCCATCCCTCTC 60.835 68.421 0.00 0.00 0.00 3.20
464 465 2.283809 CTCGACCCCCATCCCTCT 59.716 66.667 0.00 0.00 0.00 3.69
465 466 2.844839 CCTCGACCCCCATCCCTC 60.845 72.222 0.00 0.00 0.00 4.30
466 467 3.695825 ACCTCGACCCCCATCCCT 61.696 66.667 0.00 0.00 0.00 4.20
467 468 3.480133 CACCTCGACCCCCATCCC 61.480 72.222 0.00 0.00 0.00 3.85
468 469 3.480133 CCACCTCGACCCCCATCC 61.480 72.222 0.00 0.00 0.00 3.51
469 470 4.176752 GCCACCTCGACCCCCATC 62.177 72.222 0.00 0.00 0.00 3.51
490 491 3.677648 GTGCTTGGGCTGCCTGTG 61.678 66.667 19.68 9.56 39.59 3.66
491 492 4.982701 GGTGCTTGGGCTGCCTGT 62.983 66.667 19.68 0.00 39.59 4.00
518 519 3.052082 CAACCGCCTGGCAGAGTG 61.052 66.667 20.29 12.44 39.70 3.51
582 583 4.824515 AGGAGGACCGAGCCGAGG 62.825 72.222 0.00 0.00 41.83 4.63
583 584 3.213402 GAGGAGGACCGAGCCGAG 61.213 72.222 0.00 0.00 41.83 4.63
584 585 4.816984 GGAGGAGGACCGAGCCGA 62.817 72.222 0.00 0.00 41.83 5.54
606 607 3.072468 CTGTGCTGGGCCATTGGG 61.072 66.667 6.72 0.00 37.18 4.12
607 608 3.072468 CCTGTGCTGGGCCATTGG 61.072 66.667 6.72 0.00 0.00 3.16
608 609 3.766691 GCCTGTGCTGGGCCATTG 61.767 66.667 6.72 0.00 43.49 2.82
619 620 4.473520 ATTCCCGAGCCGCCTGTG 62.474 66.667 0.00 0.00 0.00 3.66
620 621 4.473520 CATTCCCGAGCCGCCTGT 62.474 66.667 0.00 0.00 0.00 4.00
624 625 4.918201 CTCCCATTCCCGAGCCGC 62.918 72.222 0.00 0.00 0.00 6.53
625 626 4.241555 CCTCCCATTCCCGAGCCG 62.242 72.222 0.00 0.00 0.00 5.52
626 627 2.768344 TCCTCCCATTCCCGAGCC 60.768 66.667 0.00 0.00 0.00 4.70
627 628 2.812619 CCTCCTCCCATTCCCGAGC 61.813 68.421 0.00 0.00 0.00 5.03
628 629 2.143419 CCCTCCTCCCATTCCCGAG 61.143 68.421 0.00 0.00 0.00 4.63
629 630 2.040884 CCCTCCTCCCATTCCCGA 60.041 66.667 0.00 0.00 0.00 5.14
630 631 3.171388 CCCCTCCTCCCATTCCCG 61.171 72.222 0.00 0.00 0.00 5.14
631 632 2.778717 CCCCCTCCTCCCATTCCC 60.779 72.222 0.00 0.00 0.00 3.97
632 633 2.044620 ACCCCCTCCTCCCATTCC 59.955 66.667 0.00 0.00 0.00 3.01
633 634 1.619669 ACACCCCCTCCTCCCATTC 60.620 63.158 0.00 0.00 0.00 2.67
634 635 1.619669 GACACCCCCTCCTCCCATT 60.620 63.158 0.00 0.00 0.00 3.16
635 636 2.042930 GACACCCCCTCCTCCCAT 59.957 66.667 0.00 0.00 0.00 4.00
636 637 3.537506 TGACACCCCCTCCTCCCA 61.538 66.667 0.00 0.00 0.00 4.37
637 638 3.009714 GTGACACCCCCTCCTCCC 61.010 72.222 0.00 0.00 0.00 4.30
638 639 3.391382 CGTGACACCCCCTCCTCC 61.391 72.222 0.00 0.00 0.00 4.30
639 640 2.283676 TCGTGACACCCCCTCCTC 60.284 66.667 0.00 0.00 0.00 3.71
640 641 2.283966 CTCGTGACACCCCCTCCT 60.284 66.667 0.00 0.00 0.00 3.69
641 642 2.283676 TCTCGTGACACCCCCTCC 60.284 66.667 0.00 0.00 0.00 4.30
642 643 2.971452 GTCTCGTGACACCCCCTC 59.029 66.667 12.54 0.00 42.48 4.30
643 644 2.989824 CGTCTCGTGACACCCCCT 60.990 66.667 17.02 0.00 43.06 4.79
644 645 2.987547 TCGTCTCGTGACACCCCC 60.988 66.667 17.02 0.00 43.06 5.40
645 646 2.567049 CTCGTCTCGTGACACCCC 59.433 66.667 17.02 0.00 43.06 4.95
646 647 1.924320 CTCCTCGTCTCGTGACACCC 61.924 65.000 17.02 0.00 43.06 4.61
647 648 1.235948 ACTCCTCGTCTCGTGACACC 61.236 60.000 17.02 0.00 43.06 4.16
648 649 0.110147 CACTCCTCGTCTCGTGACAC 60.110 60.000 17.02 0.00 43.06 3.67
649 650 1.235281 CCACTCCTCGTCTCGTGACA 61.235 60.000 17.02 4.43 43.06 3.58
650 651 1.502640 CCACTCCTCGTCTCGTGAC 59.497 63.158 7.56 7.56 39.70 3.67
651 652 1.674651 CCCACTCCTCGTCTCGTGA 60.675 63.158 0.00 0.00 0.00 4.35
652 653 2.701780 CCCCACTCCTCGTCTCGTG 61.702 68.421 0.00 0.00 0.00 4.35
653 654 2.212794 ATCCCCACTCCTCGTCTCGT 62.213 60.000 0.00 0.00 0.00 4.18
654 655 0.179026 TATCCCCACTCCTCGTCTCG 60.179 60.000 0.00 0.00 0.00 4.04
655 656 1.611519 CTATCCCCACTCCTCGTCTC 58.388 60.000 0.00 0.00 0.00 3.36
656 657 0.186386 CCTATCCCCACTCCTCGTCT 59.814 60.000 0.00 0.00 0.00 4.18
657 658 0.185416 TCCTATCCCCACTCCTCGTC 59.815 60.000 0.00 0.00 0.00 4.20
658 659 0.106116 GTCCTATCCCCACTCCTCGT 60.106 60.000 0.00 0.00 0.00 4.18
659 660 1.173444 CGTCCTATCCCCACTCCTCG 61.173 65.000 0.00 0.00 0.00 4.63
660 661 0.828343 CCGTCCTATCCCCACTCCTC 60.828 65.000 0.00 0.00 0.00 3.71
661 662 1.233369 CCGTCCTATCCCCACTCCT 59.767 63.158 0.00 0.00 0.00 3.69
662 663 1.837499 CCCGTCCTATCCCCACTCC 60.837 68.421 0.00 0.00 0.00 3.85
663 664 1.837499 CCCCGTCCTATCCCCACTC 60.837 68.421 0.00 0.00 0.00 3.51
664 665 2.285868 CCCCGTCCTATCCCCACT 59.714 66.667 0.00 0.00 0.00 4.00
665 666 2.138831 GTCCCCGTCCTATCCCCAC 61.139 68.421 0.00 0.00 0.00 4.61
666 667 2.284493 GTCCCCGTCCTATCCCCA 59.716 66.667 0.00 0.00 0.00 4.96
667 668 2.916181 CGTCCCCGTCCTATCCCC 60.916 72.222 0.00 0.00 0.00 4.81
668 669 2.916181 CCGTCCCCGTCCTATCCC 60.916 72.222 0.00 0.00 0.00 3.85
669 670 2.916181 CCCGTCCCCGTCCTATCC 60.916 72.222 0.00 0.00 0.00 2.59
670 671 1.902432 CTCCCGTCCCCGTCCTATC 60.902 68.421 0.00 0.00 0.00 2.08
671 672 2.197875 CTCCCGTCCCCGTCCTAT 59.802 66.667 0.00 0.00 0.00 2.57
672 673 4.133373 CCTCCCGTCCCCGTCCTA 62.133 72.222 0.00 0.00 0.00 2.94
709 710 4.779733 TCCTCACCGGCTCCTCCC 62.780 72.222 0.00 0.00 0.00 4.30
710 711 2.683933 TTCCTCACCGGCTCCTCC 60.684 66.667 0.00 0.00 0.00 4.30
711 712 2.726351 CCTTCCTCACCGGCTCCTC 61.726 68.421 0.00 0.00 0.00 3.71
712 713 2.685380 CCTTCCTCACCGGCTCCT 60.685 66.667 0.00 0.00 0.00 3.69
713 714 3.787001 CCCTTCCTCACCGGCTCC 61.787 72.222 0.00 0.00 0.00 4.70
714 715 2.683933 TCCCTTCCTCACCGGCTC 60.684 66.667 0.00 0.00 0.00 4.70
715 716 3.003763 GTCCCTTCCTCACCGGCT 61.004 66.667 0.00 0.00 0.00 5.52
716 717 4.452733 CGTCCCTTCCTCACCGGC 62.453 72.222 0.00 0.00 0.00 6.13
717 718 2.502692 GAACGTCCCTTCCTCACCGG 62.503 65.000 0.00 0.00 0.00 5.28
718 719 1.080025 GAACGTCCCTTCCTCACCG 60.080 63.158 0.00 0.00 0.00 4.94
719 720 1.080025 CGAACGTCCCTTCCTCACC 60.080 63.158 0.00 0.00 0.00 4.02
720 721 1.080025 CCGAACGTCCCTTCCTCAC 60.080 63.158 0.00 0.00 0.00 3.51
721 722 2.939261 GCCGAACGTCCCTTCCTCA 61.939 63.158 0.00 0.00 0.00 3.86
722 723 2.125633 GCCGAACGTCCCTTCCTC 60.126 66.667 0.00 0.00 0.00 3.71
723 724 4.065281 CGCCGAACGTCCCTTCCT 62.065 66.667 0.00 0.00 36.87 3.36
724 725 4.060038 TCGCCGAACGTCCCTTCC 62.060 66.667 0.00 0.00 44.19 3.46
725 726 2.808321 GTCGCCGAACGTCCCTTC 60.808 66.667 0.00 0.00 44.19 3.46
726 727 4.712425 CGTCGCCGAACGTCCCTT 62.712 66.667 0.00 0.00 44.19 3.95
733 734 3.966026 CTGACCCTCGTCGCCGAAC 62.966 68.421 0.00 0.00 43.69 3.95
734 735 3.744719 CTGACCCTCGTCGCCGAA 61.745 66.667 0.00 0.00 43.69 4.30
764 765 4.099170 AGGGCGTTCTCGTCGTCG 62.099 66.667 0.00 0.00 43.10 5.12
765 766 2.504244 CAGGGCGTTCTCGTCGTC 60.504 66.667 0.00 0.00 43.10 4.20
766 767 4.052229 CCAGGGCGTTCTCGTCGT 62.052 66.667 0.00 0.00 43.10 4.34
770 771 4.473520 ATGGCCAGGGCGTTCTCG 62.474 66.667 13.05 0.00 43.06 4.04
771 772 2.514824 GATGGCCAGGGCGTTCTC 60.515 66.667 13.05 0.00 43.06 2.87
772 773 4.473520 CGATGGCCAGGGCGTTCT 62.474 66.667 13.05 0.00 43.06 3.01
782 783 3.750373 TTTAGGGAGCGCGATGGCC 62.750 63.158 12.10 0.43 35.02 5.36
783 784 1.373590 TTTTTAGGGAGCGCGATGGC 61.374 55.000 12.10 0.00 0.00 4.40
784 785 2.775351 TTTTTAGGGAGCGCGATGG 58.225 52.632 12.10 0.00 0.00 3.51
800 801 6.401796 CCCTCGTCGTCGATTAAGAAATTTTT 60.402 38.462 5.00 0.00 45.21 1.94
801 802 5.063060 CCCTCGTCGTCGATTAAGAAATTTT 59.937 40.000 5.00 0.00 45.21 1.82
802 803 4.565564 CCCTCGTCGTCGATTAAGAAATTT 59.434 41.667 5.00 0.00 45.21 1.82
803 804 4.110482 CCCTCGTCGTCGATTAAGAAATT 58.890 43.478 5.00 0.00 45.21 1.82
804 805 3.129988 ACCCTCGTCGTCGATTAAGAAAT 59.870 43.478 5.00 0.00 45.21 2.17
805 806 2.489329 ACCCTCGTCGTCGATTAAGAAA 59.511 45.455 5.00 0.00 45.21 2.52
806 807 2.086869 ACCCTCGTCGTCGATTAAGAA 58.913 47.619 5.00 0.00 45.21 2.52
807 808 1.742761 ACCCTCGTCGTCGATTAAGA 58.257 50.000 5.00 0.00 45.21 2.10
808 809 2.556534 AACCCTCGTCGTCGATTAAG 57.443 50.000 5.00 0.00 45.21 1.85
809 810 3.302365 AAAACCCTCGTCGTCGATTAA 57.698 42.857 5.00 0.00 45.21 1.40
810 811 3.244976 GAAAAACCCTCGTCGTCGATTA 58.755 45.455 5.00 0.00 45.21 1.75
811 812 2.064014 GAAAAACCCTCGTCGTCGATT 58.936 47.619 5.00 0.00 45.21 3.34
812 813 1.670967 GGAAAAACCCTCGTCGTCGAT 60.671 52.381 5.00 0.00 45.21 3.59
813 814 0.318955 GGAAAAACCCTCGTCGTCGA 60.319 55.000 4.42 4.42 44.12 4.20
814 815 0.319297 AGGAAAAACCCTCGTCGTCG 60.319 55.000 0.00 0.00 40.05 5.12
815 816 1.875009 AAGGAAAAACCCTCGTCGTC 58.125 50.000 0.00 0.00 40.05 4.20
816 817 2.336945 AAAGGAAAAACCCTCGTCGT 57.663 45.000 0.00 0.00 40.05 4.34
817 818 3.703286 AAAAAGGAAAAACCCTCGTCG 57.297 42.857 0.00 0.00 40.05 5.12
837 838 4.996758 TCGTGATCTCATCAGCAAGAAAAA 59.003 37.500 0.00 0.00 40.53 1.94
838 839 4.568956 TCGTGATCTCATCAGCAAGAAAA 58.431 39.130 0.00 0.00 40.53 2.29
839 840 4.082026 TCTCGTGATCTCATCAGCAAGAAA 60.082 41.667 0.00 0.00 40.53 2.52
840 841 3.445096 TCTCGTGATCTCATCAGCAAGAA 59.555 43.478 0.00 0.00 40.53 2.52
841 842 3.019564 TCTCGTGATCTCATCAGCAAGA 58.980 45.455 0.00 0.00 40.53 3.02
842 843 3.433513 TCTCGTGATCTCATCAGCAAG 57.566 47.619 0.00 0.00 40.53 4.01
843 844 3.445096 TCTTCTCGTGATCTCATCAGCAA 59.555 43.478 0.00 0.00 40.53 3.91
844 845 3.019564 TCTTCTCGTGATCTCATCAGCA 58.980 45.455 0.00 0.00 40.53 4.41
845 846 3.706802 TCTTCTCGTGATCTCATCAGC 57.293 47.619 0.00 0.00 40.53 4.26
846 847 5.497635 TCTTCTTCTCGTGATCTCATCAG 57.502 43.478 0.00 0.00 40.53 2.90
847 848 4.337836 CCTCTTCTTCTCGTGATCTCATCA 59.662 45.833 0.00 0.00 36.84 3.07
848 849 4.792704 GCCTCTTCTTCTCGTGATCTCATC 60.793 50.000 0.00 0.00 0.00 2.92
849 850 3.068024 GCCTCTTCTTCTCGTGATCTCAT 59.932 47.826 0.00 0.00 0.00 2.90
850 851 2.425312 GCCTCTTCTTCTCGTGATCTCA 59.575 50.000 0.00 0.00 0.00 3.27
851 852 2.425312 TGCCTCTTCTTCTCGTGATCTC 59.575 50.000 0.00 0.00 0.00 2.75
856 857 0.739112 GGCTGCCTCTTCTTCTCGTG 60.739 60.000 12.43 0.00 0.00 4.35
858 859 1.153469 GGGCTGCCTCTTCTTCTCG 60.153 63.158 19.68 0.00 0.00 4.04
892 893 9.909644 GATAAGTAAAGTACACAAGAAGACAGA 57.090 33.333 0.00 0.00 0.00 3.41
893 894 8.851416 CGATAAGTAAAGTACACAAGAAGACAG 58.149 37.037 0.00 0.00 0.00 3.51
895 896 8.636843 CACGATAAGTAAAGTACACAAGAAGAC 58.363 37.037 0.00 0.00 0.00 3.01
897 898 7.063074 CCCACGATAAGTAAAGTACACAAGAAG 59.937 40.741 0.00 0.00 0.00 2.85
899 900 6.392354 CCCACGATAAGTAAAGTACACAAGA 58.608 40.000 0.00 0.00 0.00 3.02
900 901 5.063060 GCCCACGATAAGTAAAGTACACAAG 59.937 44.000 0.00 0.00 0.00 3.16
901 902 4.931002 GCCCACGATAAGTAAAGTACACAA 59.069 41.667 0.00 0.00 0.00 3.33
902 903 4.221262 AGCCCACGATAAGTAAAGTACACA 59.779 41.667 0.00 0.00 0.00 3.72
903 904 4.752146 AGCCCACGATAAGTAAAGTACAC 58.248 43.478 0.00 0.00 0.00 2.90
904 905 5.410355 AAGCCCACGATAAGTAAAGTACA 57.590 39.130 0.00 0.00 0.00 2.90
905 906 4.807834 GGAAGCCCACGATAAGTAAAGTAC 59.192 45.833 0.00 0.00 0.00 2.73
906 907 4.713321 AGGAAGCCCACGATAAGTAAAGTA 59.287 41.667 0.00 0.00 33.88 2.24
907 908 3.518303 AGGAAGCCCACGATAAGTAAAGT 59.482 43.478 0.00 0.00 33.88 2.66
931 932 0.583917 GCGAGATCGAAAGCCCAATC 59.416 55.000 6.39 0.00 43.02 2.67
976 977 0.394488 CCCTCCTCAGAGCTCGTGTA 60.394 60.000 8.37 0.00 38.96 2.90
977 978 1.680651 CCCTCCTCAGAGCTCGTGT 60.681 63.158 8.37 0.00 38.96 4.49
1023 1035 2.503871 GAGAGTAGGTTTTCGTCGTCG 58.496 52.381 0.00 0.00 38.55 5.12
1132 1146 0.322546 AAGCGGCGGAAAAAGAGGAT 60.323 50.000 9.78 0.00 0.00 3.24
1136 1150 2.322081 CGGAAGCGGCGGAAAAAGA 61.322 57.895 9.78 0.00 0.00 2.52
1284 1298 2.526873 ACCGAGGAGTGGCAGGTT 60.527 61.111 0.00 0.00 0.00 3.50
1559 1599 0.031716 TGAGATGAGAGGACCCCAGG 60.032 60.000 0.00 0.00 0.00 4.45
1567 1608 1.566211 ACCAGTGGTGAGATGAGAGG 58.434 55.000 15.86 0.00 32.98 3.69
1593 1637 4.736611 ACCCTTCGTAGTATATCCCTCA 57.263 45.455 0.00 0.00 0.00 3.86
1608 1652 6.699575 ACATACATGCTGAAAATACCCTTC 57.300 37.500 3.07 0.00 0.00 3.46
1622 1669 3.171277 GACAAGCCGAAAACATACATGC 58.829 45.455 0.00 0.00 0.00 4.06
1630 1677 0.935196 ACAGACGACAAGCCGAAAAC 59.065 50.000 0.00 0.00 0.00 2.43
1635 1682 2.356313 AGCACAGACGACAAGCCG 60.356 61.111 0.00 0.00 0.00 5.52
1815 1862 6.295349 CGGTGAAGCCTAATATGGAGAGTAAT 60.295 42.308 0.00 0.00 34.25 1.89
1891 1944 3.568007 TCCAGTTCAATAGTTGTTGCCAC 59.432 43.478 0.00 0.00 0.00 5.01
2015 2082 1.095600 AAGCTGCAGCATGATGACAG 58.904 50.000 38.24 22.70 45.16 3.51
2068 2136 5.185668 TGATGATGATAAAATGCGTTGGG 57.814 39.130 0.00 0.00 0.00 4.12
2135 2209 8.939929 AGAACACTACATCACAACTTCATTATG 58.060 33.333 0.00 0.00 0.00 1.90
2213 2361 6.600427 AGGTACCACTAACAAATATTTTCCCG 59.400 38.462 15.94 0.00 0.00 5.14
2407 4230 6.527722 GCACAACCAAACATCATGTATTACAG 59.472 38.462 2.53 0.00 0.00 2.74
2473 4298 7.551974 CAGACTTCAGATGACAAATATGGAACT 59.448 37.037 0.00 0.00 0.00 3.01
2556 4381 5.875359 CCTTTTCCTATGGTCTACTTCACAC 59.125 44.000 0.00 0.00 0.00 3.82
2600 4425 1.559368 TGCAAAGGCCATAGCAATGT 58.441 45.000 5.01 0.00 42.56 2.71
2605 4430 3.128349 CAAATCATGCAAAGGCCATAGC 58.872 45.455 5.01 5.86 40.13 2.97
2611 4436 5.421212 TCAAAAACAAATCATGCAAAGGC 57.579 34.783 0.00 0.00 41.68 4.35
2612 4437 8.991026 TCTAATCAAAAACAAATCATGCAAAGG 58.009 29.630 0.00 0.00 0.00 3.11
2634 4461 7.316393 TCAGAGGAACTTTGAAGGATTCTAA 57.684 36.000 0.00 0.00 46.83 2.10
2735 4563 6.627087 TCCTATGGGAAGCCAAATAGATAG 57.373 41.667 0.00 0.00 38.93 2.08
2805 4652 1.203038 TCATGTCCACCACCAATGCTT 60.203 47.619 0.00 0.00 0.00 3.91
2836 4683 8.575589 ACAATCATCTTATGTACTGTGCAAAAA 58.424 29.630 1.96 0.23 0.00 1.94
2875 4722 6.127535 CCTGCTCAACCAAAAATCATAGTGAT 60.128 38.462 0.00 0.00 39.09 3.06
2876 4723 5.183713 CCTGCTCAACCAAAAATCATAGTGA 59.816 40.000 0.00 0.00 0.00 3.41
2877 4724 5.047802 ACCTGCTCAACCAAAAATCATAGTG 60.048 40.000 0.00 0.00 0.00 2.74
2879 4726 5.649782 ACCTGCTCAACCAAAAATCATAG 57.350 39.130 0.00 0.00 0.00 2.23
2904 4751 4.945543 TGAACTTGCATGCAGAAGATATGT 59.054 37.500 23.03 10.04 0.00 2.29
3014 4862 3.068881 CGGGAGAAGAGCCCACAA 58.931 61.111 0.00 0.00 46.36 3.33
3031 4953 4.272261 GGCAAAGTCAGCTAAGATTCTAGC 59.728 45.833 0.00 6.90 43.95 3.42
3036 4958 1.740025 GCGGCAAAGTCAGCTAAGATT 59.260 47.619 0.00 0.00 0.00 2.40
3186 5134 4.438913 TGGCCTATAAGGATGGCTAGAAT 58.561 43.478 3.32 0.00 45.45 2.40
3191 5139 1.981495 GTCTGGCCTATAAGGATGGCT 59.019 52.381 3.32 0.00 45.45 4.75
3216 5164 2.674084 GCCCAACCGTAAGCGTCAC 61.674 63.158 0.00 0.00 36.15 3.67
3227 5175 1.261938 AAATTAAGCGGGGCCCAACC 61.262 55.000 26.86 11.06 37.93 3.77
3263 5220 4.032104 CACCAAGTTAGGTACGCGAATAAC 59.968 45.833 15.93 15.15 40.77 1.89
3288 5249 3.439857 AGACATAAAAGAGCAAGGGCA 57.560 42.857 0.00 0.00 44.61 5.36
3300 5261 5.569630 GCCAGAACAGAGGAGAAGACATAAA 60.570 44.000 0.00 0.00 0.00 1.40
3304 5265 1.620819 GCCAGAACAGAGGAGAAGACA 59.379 52.381 0.00 0.00 0.00 3.41
3325 5291 4.093408 CGAGGAAATGTAACAGGTGACATG 59.907 45.833 3.20 0.00 36.42 3.21
3463 6774 5.310409 TCCAGACCTGAAGTGATTCTTTT 57.690 39.130 0.00 0.00 36.40 2.27
3464 6775 4.982241 TCCAGACCTGAAGTGATTCTTT 57.018 40.909 0.00 0.00 36.40 2.52
3492 6803 4.709886 TCCCGAAATCACTGAGTTAGATGA 59.290 41.667 1.42 0.00 0.00 2.92
3548 6950 4.051922 GTGGTATATCTCTTGGAACTGCG 58.948 47.826 0.00 0.00 0.00 5.18
3574 7091 0.524862 CTGTGTTGGAGCTGATTGGC 59.475 55.000 0.00 0.00 0.00 4.52
3678 7200 2.837532 TAAAGTGGGTGGGAACGTAC 57.162 50.000 0.00 0.00 0.00 3.67
3682 7204 2.884320 ACCATTAAAGTGGGTGGGAAC 58.116 47.619 0.33 0.00 43.77 3.62
3729 7340 4.051922 TGCACAGAACAAAACAAAAACGT 58.948 34.783 0.00 0.00 0.00 3.99
3731 7342 5.794448 CCAATGCACAGAACAAAACAAAAAC 59.206 36.000 0.00 0.00 0.00 2.43
3796 7407 2.429971 TGAAGCTGACAAAATTGTGGCA 59.570 40.909 3.55 3.55 42.43 4.92
3829 7440 1.136224 GCAGAACGTTAAGTGCAGCTC 60.136 52.381 19.54 0.00 37.86 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.