Multiple sequence alignment - TraesCS6B01G075000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G075000 chr6B 100.000 3390 0 0 1 3390 51443432 51440043 0.000000e+00 6261.0
1 TraesCS6B01G075000 chr6B 90.542 2030 137 25 873 2884 51507175 51505183 0.000000e+00 2634.0
2 TraesCS6B01G075000 chr6B 84.944 1169 144 15 1025 2179 51423452 51422302 0.000000e+00 1155.0
3 TraesCS6B01G075000 chr6B 93.275 342 20 3 435 774 51509912 51509572 5.050000e-138 501.0
4 TraesCS6B01G075000 chr6B 74.046 1206 245 46 1014 2177 54148992 54150171 6.720000e-117 431.0
5 TraesCS6B01G075000 chr6B 83.461 393 48 11 1786 2174 51310797 51310418 1.940000e-92 350.0
6 TraesCS6B01G075000 chr6B 75.641 390 62 20 2416 2794 51351444 51351077 2.710000e-36 163.0
7 TraesCS6B01G075000 chr6B 82.051 195 17 10 2877 3065 51503767 51503585 2.110000e-32 150.0
8 TraesCS6B01G075000 chr6B 70.839 703 166 28 1327 1999 58939474 58938781 3.550000e-25 126.0
9 TraesCS6B01G075000 chr6B 85.981 107 14 1 3247 3353 45554068 45554173 2.760000e-21 113.0
10 TraesCS6B01G075000 chr6B 77.157 197 37 6 1079 1271 63388894 63389086 1.290000e-19 108.0
11 TraesCS6B01G075000 chr6B 83.810 105 15 2 2757 2860 123484685 123484582 7.740000e-17 99.0
12 TraesCS6B01G075000 chr6A 90.216 2545 185 34 893 3390 30418800 30421327 0.000000e+00 3262.0
13 TraesCS6B01G075000 chr6A 85.750 1207 134 15 986 2178 30897291 30896109 0.000000e+00 1242.0
14 TraesCS6B01G075000 chr6A 83.861 979 137 7 1210 2179 30440173 30441139 0.000000e+00 913.0
15 TraesCS6B01G075000 chr6A 81.597 864 108 22 2381 3229 30895760 30894933 0.000000e+00 667.0
16 TraesCS6B01G075000 chr6A 87.984 258 10 5 521 776 30374929 30375167 5.540000e-73 285.0
17 TraesCS6B01G075000 chr6A 92.763 152 8 3 388 538 30374759 30374908 2.050000e-52 217.0
18 TraesCS6B01G075000 chr6A 89.796 49 3 2 323 369 180393530 180393482 1.020000e-05 62.1
19 TraesCS6B01G075000 chr6D 89.040 2354 187 35 1075 3390 27708841 27706521 0.000000e+00 2852.0
20 TraesCS6B01G075000 chr6D 86.379 1204 138 14 985 2179 27666737 27665551 0.000000e+00 1291.0
21 TraesCS6B01G075000 chr6D 88.732 71 6 2 968 1038 27708905 27708837 6.030000e-13 86.1
22 TraesCS6B01G075000 chrUn 85.920 902 102 11 1286 2178 137670306 137671191 0.000000e+00 939.0
23 TraesCS6B01G075000 chrUn 82.112 1051 129 34 2203 3229 137671324 137672339 0.000000e+00 845.0
24 TraesCS6B01G075000 chrUn 92.996 257 12 5 976 1228 137670027 137670281 1.490000e-98 370.0
25 TraesCS6B01G075000 chrUn 86.930 329 36 6 2625 2949 137778000 137778325 2.490000e-96 363.0
26 TraesCS6B01G075000 chrUn 77.273 484 95 12 1037 1511 112677078 112677555 1.550000e-68 270.0
27 TraesCS6B01G075000 chrUn 84.314 102 14 2 2757 2857 103418000 103418100 7.740000e-17 99.0
28 TraesCS6B01G075000 chr1D 87.436 390 40 7 1 387 21862114 21862497 1.120000e-119 440.0
29 TraesCS6B01G075000 chr1D 83.529 170 22 5 218 385 486733078 486733243 1.630000e-33 154.0
30 TraesCS6B01G075000 chr1D 84.466 103 13 3 2757 2857 112794273 112794374 7.740000e-17 99.0
31 TraesCS6B01G075000 chr2D 86.990 392 43 6 1 389 13712967 13712581 5.190000e-118 435.0
32 TraesCS6B01G075000 chr7A 86.735 392 43 7 1 388 8652114 8651728 8.690000e-116 427.0
33 TraesCS6B01G075000 chr7A 95.714 70 3 0 317 386 559387914 559387983 2.760000e-21 113.0
34 TraesCS6B01G075000 chr7B 88.129 278 29 4 1 276 719484042 719484317 9.070000e-86 327.0
35 TraesCS6B01G075000 chr7B 95.455 66 3 0 317 382 719484426 719484491 4.630000e-19 106.0
36 TraesCS6B01G075000 chr4A 87.452 263 32 1 1 262 702154948 702154686 5.500000e-78 302.0
37 TraesCS6B01G075000 chr5D 92.547 161 12 0 1 161 464649045 464649205 7.320000e-57 231.0
38 TraesCS6B01G075000 chr5D 86.175 217 22 6 174 387 464658277 464658488 9.460000e-56 228.0
39 TraesCS6B01G075000 chr5B 87.179 117 8 5 278 391 441406907 441407019 3.550000e-25 126.0
40 TraesCS6B01G075000 chr4D 85.294 102 13 2 2757 2857 417348131 417348231 1.660000e-18 104.0
41 TraesCS6B01G075000 chr3A 84.466 103 13 3 2757 2857 645411133 645411234 7.740000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G075000 chr6B 51440043 51443432 3389 True 6261.00 6261 100.000000 1 3390 1 chr6B.!!$R4 3389
1 TraesCS6B01G075000 chr6B 51422302 51423452 1150 True 1155.00 1155 84.944000 1025 2179 1 chr6B.!!$R3 1154
2 TraesCS6B01G075000 chr6B 51503585 51509912 6327 True 1095.00 2634 88.622667 435 3065 3 chr6B.!!$R7 2630
3 TraesCS6B01G075000 chr6B 54148992 54150171 1179 False 431.00 431 74.046000 1014 2177 1 chr6B.!!$F2 1163
4 TraesCS6B01G075000 chr6A 30418800 30421327 2527 False 3262.00 3262 90.216000 893 3390 1 chr6A.!!$F1 2497
5 TraesCS6B01G075000 chr6A 30894933 30897291 2358 True 954.50 1242 83.673500 986 3229 2 chr6A.!!$R2 2243
6 TraesCS6B01G075000 chr6A 30440173 30441139 966 False 913.00 913 83.861000 1210 2179 1 chr6A.!!$F2 969
7 TraesCS6B01G075000 chr6D 27706521 27708905 2384 True 1469.05 2852 88.886000 968 3390 2 chr6D.!!$R2 2422
8 TraesCS6B01G075000 chr6D 27665551 27666737 1186 True 1291.00 1291 86.379000 985 2179 1 chr6D.!!$R1 1194
9 TraesCS6B01G075000 chrUn 137670027 137672339 2312 False 718.00 939 87.009333 976 3229 3 chrUn.!!$F4 2253

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
89 90 0.108585 ACACCAAGTGGACGAATGCT 59.891 50.0 3.83 0.00 37.94 3.79 F
104 105 0.321564 ATGCTCTGCGGCAGTTTACA 60.322 50.0 27.63 20.52 45.75 2.41 F
227 228 0.325296 TTCGGAGGCATGGGAGTAGT 60.325 55.0 0.00 0.00 0.00 2.73 F
665 668 0.385974 ACGTTTACTTCCCGTCGACG 60.386 55.0 30.33 30.33 38.91 5.12 F
1878 4251 0.318441 AGACGGACTGTGATGGTGTG 59.682 55.0 0.00 0.00 0.00 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1423 3768 0.534203 TCCTCGTTGTCAAACCCTGC 60.534 55.0 0.00 0.0 32.23 4.85 R
1571 3919 0.926155 CGACACGAGATTGCTCCATG 59.074 55.0 0.00 0.0 37.91 3.66 R
1602 3950 2.101582 GACTACATCAGGATTGTCGGCT 59.898 50.0 0.00 0.0 0.00 5.52 R
2365 4870 0.179094 TTATGCCCGCGTCTACAAGG 60.179 55.0 4.92 0.0 0.00 3.61 R
3110 7123 0.250553 TTTGTAGGGGCACACCTTCG 60.251 55.0 0.00 0.0 42.09 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.020617 AGGCTGCACGGCAAGCTA 62.021 61.111 0.50 0.00 38.41 3.32
21 22 3.804193 GGCTGCACGGCAAGCTAC 61.804 66.667 0.50 0.00 38.41 3.58
22 23 3.049674 GCTGCACGGCAAGCTACA 61.050 61.111 0.00 0.00 38.41 2.74
23 24 2.401766 GCTGCACGGCAAGCTACAT 61.402 57.895 0.00 0.00 38.41 2.29
24 25 1.717937 CTGCACGGCAAGCTACATC 59.282 57.895 0.00 0.00 38.41 3.06
25 26 0.742281 CTGCACGGCAAGCTACATCT 60.742 55.000 0.00 0.00 38.41 2.90
26 27 0.534873 TGCACGGCAAGCTACATCTA 59.465 50.000 0.00 0.00 34.76 1.98
27 28 1.138859 TGCACGGCAAGCTACATCTAT 59.861 47.619 0.00 0.00 34.76 1.98
28 29 1.795286 GCACGGCAAGCTACATCTATC 59.205 52.381 0.00 0.00 0.00 2.08
29 30 2.546795 GCACGGCAAGCTACATCTATCT 60.547 50.000 0.00 0.00 0.00 1.98
30 31 3.312828 CACGGCAAGCTACATCTATCTC 58.687 50.000 0.00 0.00 0.00 2.75
31 32 2.959030 ACGGCAAGCTACATCTATCTCA 59.041 45.455 0.00 0.00 0.00 3.27
32 33 3.005261 ACGGCAAGCTACATCTATCTCAG 59.995 47.826 0.00 0.00 0.00 3.35
33 34 3.324993 GGCAAGCTACATCTATCTCAGC 58.675 50.000 0.00 0.00 0.00 4.26
34 35 3.006752 GGCAAGCTACATCTATCTCAGCT 59.993 47.826 0.00 0.00 44.21 4.24
37 38 4.870123 AGCTACATCTATCTCAGCTTGG 57.130 45.455 0.00 0.00 39.49 3.61
38 39 4.222336 AGCTACATCTATCTCAGCTTGGT 58.778 43.478 0.00 0.00 39.49 3.67
39 40 4.039004 AGCTACATCTATCTCAGCTTGGTG 59.961 45.833 0.00 0.00 39.49 4.17
40 41 3.834489 ACATCTATCTCAGCTTGGTGG 57.166 47.619 0.00 0.00 0.00 4.61
41 42 3.378512 ACATCTATCTCAGCTTGGTGGA 58.621 45.455 0.00 0.00 0.00 4.02
42 43 3.776969 ACATCTATCTCAGCTTGGTGGAA 59.223 43.478 0.00 0.00 0.00 3.53
43 44 3.895232 TCTATCTCAGCTTGGTGGAAC 57.105 47.619 0.00 0.00 0.00 3.62
44 45 3.173151 TCTATCTCAGCTTGGTGGAACA 58.827 45.455 0.00 0.00 39.98 3.18
45 46 2.957402 ATCTCAGCTTGGTGGAACAA 57.043 45.000 0.00 0.00 44.16 2.83
46 47 2.727123 TCTCAGCTTGGTGGAACAAA 57.273 45.000 0.00 0.00 44.16 2.83
51 52 3.965780 CTTGGTGGAACAAAGTGGC 57.034 52.632 0.00 0.00 43.06 5.01
52 53 1.110442 CTTGGTGGAACAAAGTGGCA 58.890 50.000 0.00 0.00 43.06 4.92
53 54 1.480137 CTTGGTGGAACAAAGTGGCAA 59.520 47.619 0.00 0.00 43.06 4.52
54 55 1.561643 TGGTGGAACAAAGTGGCAAA 58.438 45.000 0.00 0.00 44.16 3.68
55 56 1.480137 TGGTGGAACAAAGTGGCAAAG 59.520 47.619 0.00 0.00 44.16 2.77
56 57 1.570813 GTGGAACAAAGTGGCAAAGC 58.429 50.000 0.00 0.00 44.16 3.51
57 58 1.136891 GTGGAACAAAGTGGCAAAGCT 59.863 47.619 0.00 0.00 44.16 3.74
58 59 2.360801 GTGGAACAAAGTGGCAAAGCTA 59.639 45.455 0.00 0.00 44.16 3.32
59 60 3.027412 TGGAACAAAGTGGCAAAGCTAA 58.973 40.909 0.00 0.00 31.92 3.09
60 61 3.449018 TGGAACAAAGTGGCAAAGCTAAA 59.551 39.130 0.00 0.00 31.92 1.85
61 62 4.051237 GGAACAAAGTGGCAAAGCTAAAG 58.949 43.478 0.00 0.00 0.00 1.85
62 63 4.202111 GGAACAAAGTGGCAAAGCTAAAGA 60.202 41.667 0.00 0.00 0.00 2.52
63 64 5.337578 AACAAAGTGGCAAAGCTAAAGAA 57.662 34.783 0.00 0.00 0.00 2.52
64 65 5.337578 ACAAAGTGGCAAAGCTAAAGAAA 57.662 34.783 0.00 0.00 0.00 2.52
65 66 5.729510 ACAAAGTGGCAAAGCTAAAGAAAA 58.270 33.333 0.00 0.00 0.00 2.29
66 67 6.169800 ACAAAGTGGCAAAGCTAAAGAAAAA 58.830 32.000 0.00 0.00 0.00 1.94
83 84 1.675552 AAAAGGACACCAAGTGGACG 58.324 50.000 3.83 0.00 37.94 4.79
84 85 0.834612 AAAGGACACCAAGTGGACGA 59.165 50.000 3.83 0.00 37.94 4.20
85 86 0.834612 AAGGACACCAAGTGGACGAA 59.165 50.000 3.83 0.00 37.94 3.85
86 87 1.056660 AGGACACCAAGTGGACGAAT 58.943 50.000 3.83 0.00 37.94 3.34
87 88 1.156736 GGACACCAAGTGGACGAATG 58.843 55.000 3.83 0.00 37.94 2.67
88 89 0.517316 GACACCAAGTGGACGAATGC 59.483 55.000 3.83 0.00 37.94 3.56
89 90 0.108585 ACACCAAGTGGACGAATGCT 59.891 50.000 3.83 0.00 37.94 3.79
90 91 0.798776 CACCAAGTGGACGAATGCTC 59.201 55.000 3.83 0.00 38.94 4.26
91 92 0.687354 ACCAAGTGGACGAATGCTCT 59.313 50.000 3.83 0.00 38.94 4.09
92 93 1.081892 CCAAGTGGACGAATGCTCTG 58.918 55.000 0.00 0.00 37.39 3.35
93 94 0.445436 CAAGTGGACGAATGCTCTGC 59.555 55.000 0.00 0.00 0.00 4.26
94 95 1.016130 AAGTGGACGAATGCTCTGCG 61.016 55.000 0.00 0.00 0.00 5.18
95 96 2.125552 TGGACGAATGCTCTGCGG 60.126 61.111 0.00 0.00 0.00 5.69
96 97 3.567797 GGACGAATGCTCTGCGGC 61.568 66.667 0.00 0.00 0.00 6.53
97 98 2.815211 GACGAATGCTCTGCGGCA 60.815 61.111 1.29 1.29 46.63 5.69
98 99 2.806856 GACGAATGCTCTGCGGCAG 61.807 63.158 23.72 23.72 45.75 4.85
99 100 2.816958 CGAATGCTCTGCGGCAGT 60.817 61.111 27.63 9.81 45.75 4.40
100 101 2.393768 CGAATGCTCTGCGGCAGTT 61.394 57.895 27.63 15.69 45.75 3.16
101 102 1.878775 GAATGCTCTGCGGCAGTTT 59.121 52.632 27.63 17.11 45.75 2.66
102 103 1.086696 GAATGCTCTGCGGCAGTTTA 58.913 50.000 27.63 15.71 45.75 2.01
103 104 0.804989 AATGCTCTGCGGCAGTTTAC 59.195 50.000 27.63 16.18 45.75 2.01
104 105 0.321564 ATGCTCTGCGGCAGTTTACA 60.322 50.000 27.63 20.52 45.75 2.41
105 106 0.321564 TGCTCTGCGGCAGTTTACAT 60.322 50.000 27.63 0.00 37.29 2.29
106 107 0.375106 GCTCTGCGGCAGTTTACATC 59.625 55.000 27.63 1.94 32.61 3.06
107 108 0.647410 CTCTGCGGCAGTTTACATCG 59.353 55.000 27.63 1.76 32.61 3.84
108 109 1.060937 CTGCGGCAGTTTACATCGC 59.939 57.895 21.60 0.00 45.60 4.58
109 110 2.021380 GCGGCAGTTTACATCGCG 59.979 61.111 0.00 0.00 37.12 5.87
110 111 2.736682 GCGGCAGTTTACATCGCGT 61.737 57.895 5.77 0.00 37.12 6.01
111 112 1.058748 CGGCAGTTTACATCGCGTG 59.941 57.895 5.77 6.57 0.00 5.34
112 113 1.423845 GGCAGTTTACATCGCGTGG 59.576 57.895 5.77 1.48 0.00 4.94
113 114 1.017177 GGCAGTTTACATCGCGTGGA 61.017 55.000 5.77 0.00 0.00 4.02
114 115 0.793861 GCAGTTTACATCGCGTGGAA 59.206 50.000 5.77 3.93 0.00 3.53
115 116 1.396996 GCAGTTTACATCGCGTGGAAT 59.603 47.619 5.77 0.00 28.59 3.01
116 117 2.605818 GCAGTTTACATCGCGTGGAATA 59.394 45.455 5.77 0.00 28.59 1.75
117 118 3.247648 GCAGTTTACATCGCGTGGAATAT 59.752 43.478 5.77 0.00 28.59 1.28
118 119 4.260620 GCAGTTTACATCGCGTGGAATATT 60.261 41.667 5.77 0.00 28.59 1.28
119 120 5.729454 GCAGTTTACATCGCGTGGAATATTT 60.729 40.000 5.77 0.00 28.59 1.40
120 121 5.676744 CAGTTTACATCGCGTGGAATATTTG 59.323 40.000 5.77 0.56 28.59 2.32
121 122 4.804608 TTACATCGCGTGGAATATTTGG 57.195 40.909 5.77 0.00 0.00 3.28
122 123 1.333619 ACATCGCGTGGAATATTTGGC 59.666 47.619 5.77 0.00 0.00 4.52
123 124 1.603802 CATCGCGTGGAATATTTGGCT 59.396 47.619 5.77 0.00 0.00 4.75
124 125 1.745232 TCGCGTGGAATATTTGGCTT 58.255 45.000 5.77 0.00 0.00 4.35
125 126 1.400142 TCGCGTGGAATATTTGGCTTG 59.600 47.619 5.77 0.00 0.00 4.01
126 127 1.400142 CGCGTGGAATATTTGGCTTGA 59.600 47.619 0.00 0.00 0.00 3.02
127 128 2.539547 CGCGTGGAATATTTGGCTTGAG 60.540 50.000 0.00 0.00 0.00 3.02
128 129 2.682856 GCGTGGAATATTTGGCTTGAGA 59.317 45.455 0.00 0.00 0.00 3.27
129 130 3.242870 GCGTGGAATATTTGGCTTGAGAG 60.243 47.826 0.00 0.00 0.00 3.20
130 131 4.191544 CGTGGAATATTTGGCTTGAGAGA 58.808 43.478 0.00 0.00 0.00 3.10
131 132 4.635765 CGTGGAATATTTGGCTTGAGAGAA 59.364 41.667 0.00 0.00 0.00 2.87
132 133 5.123820 CGTGGAATATTTGGCTTGAGAGAAA 59.876 40.000 0.00 0.00 0.00 2.52
133 134 6.183360 CGTGGAATATTTGGCTTGAGAGAAAT 60.183 38.462 0.00 0.00 0.00 2.17
134 135 7.012327 CGTGGAATATTTGGCTTGAGAGAAATA 59.988 37.037 0.00 0.00 0.00 1.40
135 136 8.348507 GTGGAATATTTGGCTTGAGAGAAATAG 58.651 37.037 0.00 0.00 0.00 1.73
136 137 8.274322 TGGAATATTTGGCTTGAGAGAAATAGA 58.726 33.333 0.00 0.00 0.00 1.98
137 138 9.125026 GGAATATTTGGCTTGAGAGAAATAGAA 57.875 33.333 0.00 0.00 0.00 2.10
139 140 8.688747 ATATTTGGCTTGAGAGAAATAGAAGG 57.311 34.615 0.00 0.00 0.00 3.46
140 141 5.762179 TTGGCTTGAGAGAAATAGAAGGA 57.238 39.130 0.00 0.00 0.00 3.36
141 142 5.965033 TGGCTTGAGAGAAATAGAAGGAT 57.035 39.130 0.00 0.00 0.00 3.24
142 143 5.923204 TGGCTTGAGAGAAATAGAAGGATC 58.077 41.667 0.00 0.00 0.00 3.36
143 144 5.664908 TGGCTTGAGAGAAATAGAAGGATCT 59.335 40.000 0.00 0.00 39.82 2.75
144 145 6.157645 TGGCTTGAGAGAAATAGAAGGATCTT 59.842 38.462 0.00 0.00 37.10 2.40
145 146 7.053498 GGCTTGAGAGAAATAGAAGGATCTTT 58.947 38.462 0.00 0.00 37.10 2.52
146 147 8.207545 GGCTTGAGAGAAATAGAAGGATCTTTA 58.792 37.037 0.00 0.00 37.10 1.85
147 148 9.606631 GCTTGAGAGAAATAGAAGGATCTTTAA 57.393 33.333 0.00 0.00 37.10 1.52
150 151 9.494055 TGAGAGAAATAGAAGGATCTTTAAGGA 57.506 33.333 0.00 0.00 37.10 3.36
157 158 9.844257 AATAGAAGGATCTTTAAGGATTCAGTG 57.156 33.333 8.47 0.00 37.10 3.66
158 159 6.118852 AGAAGGATCTTTAAGGATTCAGTGC 58.881 40.000 8.47 0.00 29.15 4.40
159 160 5.441718 AGGATCTTTAAGGATTCAGTGCA 57.558 39.130 8.47 0.00 0.00 4.57
160 161 5.819991 AGGATCTTTAAGGATTCAGTGCAA 58.180 37.500 8.47 0.00 0.00 4.08
161 162 6.430007 AGGATCTTTAAGGATTCAGTGCAAT 58.570 36.000 8.47 0.00 0.00 3.56
162 163 6.545298 AGGATCTTTAAGGATTCAGTGCAATC 59.455 38.462 8.47 6.71 32.70 2.67
163 164 6.545298 GGATCTTTAAGGATTCAGTGCAATCT 59.455 38.462 1.13 0.00 33.81 2.40
164 165 7.067981 GGATCTTTAAGGATTCAGTGCAATCTT 59.932 37.037 1.13 0.00 33.81 2.40
165 166 9.113838 GATCTTTAAGGATTCAGTGCAATCTTA 57.886 33.333 1.13 0.00 33.81 2.10
166 167 9.638176 ATCTTTAAGGATTCAGTGCAATCTTAT 57.362 29.630 12.20 0.00 33.81 1.73
169 170 6.851222 AAGGATTCAGTGCAATCTTATACG 57.149 37.500 12.20 0.00 33.81 3.06
170 171 5.300752 AGGATTCAGTGCAATCTTATACGG 58.699 41.667 12.20 0.00 33.81 4.02
171 172 5.070446 AGGATTCAGTGCAATCTTATACGGA 59.930 40.000 12.20 0.00 33.81 4.69
172 173 5.177696 GGATTCAGTGCAATCTTATACGGAC 59.822 44.000 12.20 0.00 33.81 4.79
173 174 3.702330 TCAGTGCAATCTTATACGGACG 58.298 45.455 0.00 0.00 0.00 4.79
174 175 3.129813 TCAGTGCAATCTTATACGGACGT 59.870 43.478 1.98 1.98 0.00 4.34
175 176 3.863424 CAGTGCAATCTTATACGGACGTT 59.137 43.478 1.57 0.00 0.00 3.99
176 177 4.026804 CAGTGCAATCTTATACGGACGTTC 60.027 45.833 1.57 0.00 0.00 3.95
177 178 4.110482 GTGCAATCTTATACGGACGTTCT 58.890 43.478 1.57 0.00 0.00 3.01
178 179 4.565564 GTGCAATCTTATACGGACGTTCTT 59.434 41.667 1.57 0.00 0.00 2.52
179 180 5.745294 GTGCAATCTTATACGGACGTTCTTA 59.255 40.000 1.57 0.00 0.00 2.10
180 181 6.420008 GTGCAATCTTATACGGACGTTCTTAT 59.580 38.462 1.57 0.00 0.00 1.73
181 182 6.982141 TGCAATCTTATACGGACGTTCTTATT 59.018 34.615 1.57 0.00 0.00 1.40
182 183 8.136800 TGCAATCTTATACGGACGTTCTTATTA 58.863 33.333 1.57 0.00 0.00 0.98
183 184 8.636843 GCAATCTTATACGGACGTTCTTATTAG 58.363 37.037 1.57 0.00 0.00 1.73
184 185 9.888878 CAATCTTATACGGACGTTCTTATTAGA 57.111 33.333 10.42 10.42 0.00 2.10
186 187 7.579726 TCTTATACGGACGTTCTTATTAGAGC 58.420 38.462 1.57 0.00 0.00 4.09
187 188 7.443575 TCTTATACGGACGTTCTTATTAGAGCT 59.556 37.037 1.57 0.00 30.13 4.09
188 189 8.607441 TTATACGGACGTTCTTATTAGAGCTA 57.393 34.615 1.57 0.00 30.13 3.32
189 190 5.421212 ACGGACGTTCTTATTAGAGCTAG 57.579 43.478 0.00 0.00 30.13 3.42
190 191 4.275443 ACGGACGTTCTTATTAGAGCTAGG 59.725 45.833 0.00 0.00 30.13 3.02
191 192 4.320348 CGGACGTTCTTATTAGAGCTAGGG 60.320 50.000 0.00 0.00 30.13 3.53
192 193 4.826183 GGACGTTCTTATTAGAGCTAGGGA 59.174 45.833 0.00 0.00 30.13 4.20
193 194 5.477637 GGACGTTCTTATTAGAGCTAGGGAT 59.522 44.000 0.00 0.00 30.13 3.85
194 195 6.334102 ACGTTCTTATTAGAGCTAGGGATG 57.666 41.667 0.00 0.00 30.13 3.51
195 196 6.069331 ACGTTCTTATTAGAGCTAGGGATGA 58.931 40.000 0.00 0.00 30.13 2.92
196 197 6.016108 ACGTTCTTATTAGAGCTAGGGATGAC 60.016 42.308 0.00 0.00 30.13 3.06
197 198 6.016192 CGTTCTTATTAGAGCTAGGGATGACA 60.016 42.308 0.00 0.00 30.13 3.58
198 199 7.309499 CGTTCTTATTAGAGCTAGGGATGACAT 60.309 40.741 0.00 0.00 30.13 3.06
199 200 8.371699 GTTCTTATTAGAGCTAGGGATGACATT 58.628 37.037 0.00 0.00 0.00 2.71
200 201 9.601810 TTCTTATTAGAGCTAGGGATGACATTA 57.398 33.333 0.00 0.00 0.00 1.90
201 202 9.249053 TCTTATTAGAGCTAGGGATGACATTAG 57.751 37.037 0.00 0.00 0.00 1.73
202 203 5.730296 TTAGAGCTAGGGATGACATTAGC 57.270 43.478 8.88 8.88 38.98 3.09
203 204 2.903135 AGAGCTAGGGATGACATTAGCC 59.097 50.000 12.12 6.19 39.39 3.93
204 205 2.903135 GAGCTAGGGATGACATTAGCCT 59.097 50.000 12.12 0.00 39.39 4.58
205 206 2.903135 AGCTAGGGATGACATTAGCCTC 59.097 50.000 12.12 0.00 39.39 4.70
206 207 2.027653 GCTAGGGATGACATTAGCCTCC 60.028 54.545 6.41 0.00 34.00 4.30
207 208 2.503869 AGGGATGACATTAGCCTCCT 57.496 50.000 0.00 0.00 0.00 3.69
208 209 2.781667 AGGGATGACATTAGCCTCCTT 58.218 47.619 0.00 0.00 0.00 3.36
209 210 3.126453 AGGGATGACATTAGCCTCCTTT 58.874 45.455 0.00 0.00 0.00 3.11
210 211 3.137360 AGGGATGACATTAGCCTCCTTTC 59.863 47.826 0.00 0.00 0.00 2.62
211 212 3.134458 GGATGACATTAGCCTCCTTTCG 58.866 50.000 0.00 0.00 0.00 3.46
212 213 2.691409 TGACATTAGCCTCCTTTCGG 57.309 50.000 0.00 0.00 0.00 4.30
213 214 2.184533 TGACATTAGCCTCCTTTCGGA 58.815 47.619 0.00 0.00 37.82 4.55
221 222 2.998097 TCCTTTCGGAGGCATGGG 59.002 61.111 0.00 0.00 45.87 4.00
222 223 1.615124 TCCTTTCGGAGGCATGGGA 60.615 57.895 0.00 0.00 45.87 4.37
223 224 1.153086 CCTTTCGGAGGCATGGGAG 60.153 63.158 0.00 0.00 39.09 4.30
224 225 1.604378 CTTTCGGAGGCATGGGAGT 59.396 57.895 0.00 0.00 0.00 3.85
225 226 0.830648 CTTTCGGAGGCATGGGAGTA 59.169 55.000 0.00 0.00 0.00 2.59
226 227 0.830648 TTTCGGAGGCATGGGAGTAG 59.169 55.000 0.00 0.00 0.00 2.57
227 228 0.325296 TTCGGAGGCATGGGAGTAGT 60.325 55.000 0.00 0.00 0.00 2.73
228 229 0.554305 TCGGAGGCATGGGAGTAGTA 59.446 55.000 0.00 0.00 0.00 1.82
229 230 0.962489 CGGAGGCATGGGAGTAGTAG 59.038 60.000 0.00 0.00 0.00 2.57
230 231 1.343069 GGAGGCATGGGAGTAGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
231 232 1.413227 GGAGGCATGGGAGTAGTAGGT 60.413 57.143 0.00 0.00 0.00 3.08
232 233 1.689273 GAGGCATGGGAGTAGTAGGTG 59.311 57.143 0.00 0.00 0.00 4.00
233 234 1.291033 AGGCATGGGAGTAGTAGGTGA 59.709 52.381 0.00 0.00 0.00 4.02
234 235 2.090494 AGGCATGGGAGTAGTAGGTGAT 60.090 50.000 0.00 0.00 0.00 3.06
235 236 2.300437 GGCATGGGAGTAGTAGGTGATC 59.700 54.545 0.00 0.00 0.00 2.92
236 237 2.300437 GCATGGGAGTAGTAGGTGATCC 59.700 54.545 0.00 0.00 0.00 3.36
237 238 2.359981 TGGGAGTAGTAGGTGATCCG 57.640 55.000 0.00 0.00 39.05 4.18
238 239 1.848388 TGGGAGTAGTAGGTGATCCGA 59.152 52.381 0.00 0.00 39.05 4.55
239 240 2.158652 TGGGAGTAGTAGGTGATCCGAG 60.159 54.545 0.00 0.00 39.05 4.63
240 241 2.158638 GGGAGTAGTAGGTGATCCGAGT 60.159 54.545 0.00 0.00 39.05 4.18
241 242 3.072184 GGGAGTAGTAGGTGATCCGAGTA 59.928 52.174 0.00 0.00 39.05 2.59
242 243 4.317488 GGAGTAGTAGGTGATCCGAGTAG 58.683 52.174 0.00 0.00 39.05 2.57
243 244 3.742385 AGTAGTAGGTGATCCGAGTAGC 58.258 50.000 0.00 0.00 39.05 3.58
244 245 1.595466 AGTAGGTGATCCGAGTAGCG 58.405 55.000 0.00 0.00 39.05 4.26
271 272 6.320494 CTGTATAGCAGTCCTAGGTTACTG 57.680 45.833 21.16 21.16 44.79 2.74
272 273 5.763355 TGTATAGCAGTCCTAGGTTACTGT 58.237 41.667 24.31 16.32 44.03 3.55
273 274 6.192773 TGTATAGCAGTCCTAGGTTACTGTT 58.807 40.000 24.31 21.91 44.03 3.16
274 275 7.348815 TGTATAGCAGTCCTAGGTTACTGTTA 58.651 38.462 24.31 22.98 44.03 2.41
275 276 6.712179 ATAGCAGTCCTAGGTTACTGTTAC 57.288 41.667 24.31 12.84 44.03 2.50
276 277 4.413760 AGCAGTCCTAGGTTACTGTTACA 58.586 43.478 24.31 0.00 44.03 2.41
277 278 4.220163 AGCAGTCCTAGGTTACTGTTACAC 59.780 45.833 24.31 12.29 44.03 2.90
278 279 4.220163 GCAGTCCTAGGTTACTGTTACACT 59.780 45.833 24.31 8.98 44.03 3.55
279 280 5.621781 GCAGTCCTAGGTTACTGTTACACTC 60.622 48.000 24.31 8.63 44.03 3.51
280 281 5.711036 CAGTCCTAGGTTACTGTTACACTCT 59.289 44.000 18.41 0.00 38.62 3.24
281 282 5.711036 AGTCCTAGGTTACTGTTACACTCTG 59.289 44.000 9.08 0.00 0.00 3.35
282 283 4.461781 TCCTAGGTTACTGTTACACTCTGC 59.538 45.833 9.08 0.00 0.00 4.26
283 284 4.463186 CCTAGGTTACTGTTACACTCTGCT 59.537 45.833 0.00 0.00 0.00 4.24
284 285 4.957684 AGGTTACTGTTACACTCTGCTT 57.042 40.909 0.00 0.00 0.00 3.91
285 286 4.884247 AGGTTACTGTTACACTCTGCTTC 58.116 43.478 0.00 0.00 0.00 3.86
286 287 3.995048 GGTTACTGTTACACTCTGCTTCC 59.005 47.826 0.00 0.00 0.00 3.46
287 288 2.841442 ACTGTTACACTCTGCTTCCC 57.159 50.000 0.00 0.00 0.00 3.97
288 289 1.348036 ACTGTTACACTCTGCTTCCCC 59.652 52.381 0.00 0.00 0.00 4.81
289 290 0.690762 TGTTACACTCTGCTTCCCCC 59.309 55.000 0.00 0.00 0.00 5.40
305 306 1.893315 CCCCCTAATCCTGTTCCTCA 58.107 55.000 0.00 0.00 0.00 3.86
306 307 1.771255 CCCCCTAATCCTGTTCCTCAG 59.229 57.143 0.00 0.00 43.27 3.35
307 308 2.482494 CCCCTAATCCTGTTCCTCAGT 58.518 52.381 0.00 0.00 42.19 3.41
308 309 2.436173 CCCCTAATCCTGTTCCTCAGTC 59.564 54.545 0.00 0.00 42.19 3.51
309 310 3.379452 CCCTAATCCTGTTCCTCAGTCT 58.621 50.000 0.00 0.00 42.19 3.24
310 311 3.777522 CCCTAATCCTGTTCCTCAGTCTT 59.222 47.826 0.00 0.00 42.19 3.01
311 312 4.226168 CCCTAATCCTGTTCCTCAGTCTTT 59.774 45.833 0.00 0.00 42.19 2.52
312 313 5.181748 CCTAATCCTGTTCCTCAGTCTTTG 58.818 45.833 0.00 0.00 42.19 2.77
313 314 4.982241 AATCCTGTTCCTCAGTCTTTGA 57.018 40.909 0.00 0.00 42.19 2.69
314 315 4.982241 ATCCTGTTCCTCAGTCTTTGAA 57.018 40.909 0.00 0.00 42.19 2.69
315 316 4.771114 TCCTGTTCCTCAGTCTTTGAAA 57.229 40.909 0.00 0.00 42.19 2.69
316 317 5.110814 TCCTGTTCCTCAGTCTTTGAAAA 57.889 39.130 0.00 0.00 42.19 2.29
317 318 5.505780 TCCTGTTCCTCAGTCTTTGAAAAA 58.494 37.500 0.00 0.00 42.19 1.94
338 339 3.965470 ACTTTGTACAGTTTTCCCCCT 57.035 42.857 0.00 0.00 0.00 4.79
339 340 3.828921 ACTTTGTACAGTTTTCCCCCTC 58.171 45.455 0.00 0.00 0.00 4.30
340 341 2.963599 TTGTACAGTTTTCCCCCTCC 57.036 50.000 0.00 0.00 0.00 4.30
341 342 2.127651 TGTACAGTTTTCCCCCTCCT 57.872 50.000 0.00 0.00 0.00 3.69
342 343 3.278987 TGTACAGTTTTCCCCCTCCTA 57.721 47.619 0.00 0.00 0.00 2.94
343 344 3.810623 TGTACAGTTTTCCCCCTCCTAT 58.189 45.455 0.00 0.00 0.00 2.57
344 345 4.962839 TGTACAGTTTTCCCCCTCCTATA 58.037 43.478 0.00 0.00 0.00 1.31
345 346 5.352264 TGTACAGTTTTCCCCCTCCTATAA 58.648 41.667 0.00 0.00 0.00 0.98
346 347 5.974370 TGTACAGTTTTCCCCCTCCTATAAT 59.026 40.000 0.00 0.00 0.00 1.28
347 348 5.388599 ACAGTTTTCCCCCTCCTATAATG 57.611 43.478 0.00 0.00 0.00 1.90
348 349 5.043762 ACAGTTTTCCCCCTCCTATAATGA 58.956 41.667 0.00 0.00 0.00 2.57
349 350 5.494706 ACAGTTTTCCCCCTCCTATAATGAA 59.505 40.000 0.00 0.00 0.00 2.57
350 351 6.011096 ACAGTTTTCCCCCTCCTATAATGAAA 60.011 38.462 0.00 0.00 0.00 2.69
351 352 6.895204 CAGTTTTCCCCCTCCTATAATGAAAA 59.105 38.462 0.00 0.00 0.00 2.29
352 353 7.398904 CAGTTTTCCCCCTCCTATAATGAAAAA 59.601 37.037 0.00 0.00 33.56 1.94
353 354 7.619698 AGTTTTCCCCCTCCTATAATGAAAAAG 59.380 37.037 0.00 0.00 33.56 2.27
354 355 5.663158 TCCCCCTCCTATAATGAAAAAGG 57.337 43.478 0.00 0.00 0.00 3.11
355 356 4.141018 TCCCCCTCCTATAATGAAAAAGGC 60.141 45.833 0.00 0.00 0.00 4.35
356 357 4.387437 CCCCCTCCTATAATGAAAAAGGCA 60.387 45.833 0.00 0.00 0.00 4.75
357 358 4.829492 CCCCTCCTATAATGAAAAAGGCAG 59.171 45.833 0.00 0.00 0.00 4.85
358 359 5.399038 CCCCTCCTATAATGAAAAAGGCAGA 60.399 44.000 0.00 0.00 0.00 4.26
359 360 5.767168 CCCTCCTATAATGAAAAAGGCAGAG 59.233 44.000 0.00 0.00 0.00 3.35
360 361 5.240403 CCTCCTATAATGAAAAAGGCAGAGC 59.760 44.000 0.00 0.00 0.00 4.09
361 362 6.006275 TCCTATAATGAAAAAGGCAGAGCT 57.994 37.500 0.00 0.00 0.00 4.09
362 363 6.058183 TCCTATAATGAAAAAGGCAGAGCTC 58.942 40.000 5.27 5.27 0.00 4.09
363 364 5.240403 CCTATAATGAAAAAGGCAGAGCTCC 59.760 44.000 10.93 0.00 0.00 4.70
364 365 2.895242 ATGAAAAAGGCAGAGCTCCT 57.105 45.000 10.93 0.00 34.90 3.69
365 366 1.901591 TGAAAAAGGCAGAGCTCCTG 58.098 50.000 10.93 9.35 45.67 3.86
379 380 2.752358 CCTGCCAGCTCAGGTCAA 59.248 61.111 12.37 0.00 46.59 3.18
380 381 1.073722 CCTGCCAGCTCAGGTCAAA 59.926 57.895 12.37 0.00 46.59 2.69
381 382 0.538057 CCTGCCAGCTCAGGTCAAAA 60.538 55.000 12.37 0.00 46.59 2.44
382 383 1.321474 CTGCCAGCTCAGGTCAAAAA 58.679 50.000 0.00 0.00 0.00 1.94
408 409 6.918892 AAAACTGTTCCTAAAAATGCCAAC 57.081 33.333 0.00 0.00 0.00 3.77
409 410 4.600692 ACTGTTCCTAAAAATGCCAACC 57.399 40.909 0.00 0.00 0.00 3.77
410 411 3.964031 ACTGTTCCTAAAAATGCCAACCA 59.036 39.130 0.00 0.00 0.00 3.67
411 412 4.202212 ACTGTTCCTAAAAATGCCAACCAC 60.202 41.667 0.00 0.00 0.00 4.16
412 413 3.070302 TGTTCCTAAAAATGCCAACCACC 59.930 43.478 0.00 0.00 0.00 4.61
413 414 3.252554 TCCTAAAAATGCCAACCACCT 57.747 42.857 0.00 0.00 0.00 4.00
414 415 3.582164 TCCTAAAAATGCCAACCACCTT 58.418 40.909 0.00 0.00 0.00 3.50
415 416 4.742012 TCCTAAAAATGCCAACCACCTTA 58.258 39.130 0.00 0.00 0.00 2.69
416 417 4.525100 TCCTAAAAATGCCAACCACCTTAC 59.475 41.667 0.00 0.00 0.00 2.34
417 418 4.282195 CCTAAAAATGCCAACCACCTTACA 59.718 41.667 0.00 0.00 0.00 2.41
418 419 4.762289 AAAAATGCCAACCACCTTACAA 57.238 36.364 0.00 0.00 0.00 2.41
419 420 4.335400 AAAATGCCAACCACCTTACAAG 57.665 40.909 0.00 0.00 0.00 3.16
420 421 2.675658 ATGCCAACCACCTTACAAGT 57.324 45.000 0.00 0.00 0.00 3.16
421 422 1.686355 TGCCAACCACCTTACAAGTG 58.314 50.000 0.00 0.00 34.91 3.16
442 443 6.412214 AGTGGTATTTTAAAGCTCACCGTAT 58.588 36.000 0.00 0.00 0.00 3.06
469 470 8.165239 AGTTGTATTTTGTATGACAAGAAGCA 57.835 30.769 0.00 0.00 39.53 3.91
471 472 7.144722 TGTATTTTGTATGACAAGAAGCAGG 57.855 36.000 0.00 0.00 39.53 4.85
473 474 2.113860 TGTATGACAAGAAGCAGGGC 57.886 50.000 0.00 0.00 0.00 5.19
504 505 9.705290 TTTGCTTATTTGGATAGGTTTTCTTTC 57.295 29.630 0.00 0.00 0.00 2.62
515 516 5.664815 AGGTTTTCTTTCTTAGGGGAAGT 57.335 39.130 0.00 0.00 36.45 3.01
564 566 6.878389 TGCAGAGTTACATCATGAATAACACA 59.122 34.615 24.34 17.11 32.33 3.72
616 618 4.675190 TTCTACCGTAGTCTTTGAGTCG 57.325 45.455 5.46 0.00 0.00 4.18
648 650 3.559238 AGCTAGAAAATGTGCCAAACG 57.441 42.857 0.00 0.00 0.00 3.60
649 651 2.884639 AGCTAGAAAATGTGCCAAACGT 59.115 40.909 0.00 0.00 0.00 3.99
652 654 5.009210 AGCTAGAAAATGTGCCAAACGTTTA 59.991 36.000 14.20 0.00 45.35 2.01
662 665 1.192980 CCAAACGTTTACTTCCCGTCG 59.807 52.381 14.20 0.00 32.95 5.12
665 668 0.385974 ACGTTTACTTCCCGTCGACG 60.386 55.000 30.33 30.33 38.91 5.12
676 679 2.150424 CGTCGACGGTGCTGAAATT 58.850 52.632 29.70 0.00 35.37 1.82
685 688 3.120199 ACGGTGCTGAAATTCAATCTTCG 60.120 43.478 0.00 1.20 0.00 3.79
693 696 6.481644 GCTGAAATTCAATCTTCGGTATCTCT 59.518 38.462 0.00 0.00 31.68 3.10
694 697 7.518052 GCTGAAATTCAATCTTCGGTATCTCTG 60.518 40.741 0.00 0.00 31.68 3.35
705 708 3.068732 TCGGTATCTCTGGAGCAAGATTG 59.931 47.826 0.00 0.00 34.21 2.67
754 757 9.707957 CATAGGTCCCAGAATATCTATCTTACT 57.292 37.037 0.00 0.00 0.00 2.24
770 773 5.073311 TCTTACTATTGCAAGCTTCGACT 57.927 39.130 4.94 0.00 0.00 4.18
774 777 5.578005 ACTATTGCAAGCTTCGACTAGTA 57.422 39.130 4.94 0.00 0.00 1.82
776 779 3.936372 TTGCAAGCTTCGACTAGTACT 57.064 42.857 0.00 0.00 0.00 2.73
777 780 3.489180 TGCAAGCTTCGACTAGTACTC 57.511 47.619 0.00 0.00 0.00 2.59
778 781 2.163815 TGCAAGCTTCGACTAGTACTCC 59.836 50.000 0.00 0.00 0.00 3.85
779 782 2.424246 GCAAGCTTCGACTAGTACTCCT 59.576 50.000 0.00 0.00 0.00 3.69
780 783 3.119424 GCAAGCTTCGACTAGTACTCCTT 60.119 47.826 0.00 0.00 0.00 3.36
781 784 4.664188 CAAGCTTCGACTAGTACTCCTTC 58.336 47.826 0.00 0.00 0.00 3.46
782 785 3.281158 AGCTTCGACTAGTACTCCTTCC 58.719 50.000 0.00 0.00 0.00 3.46
783 786 2.031930 GCTTCGACTAGTACTCCTTCCG 59.968 54.545 0.00 0.00 0.00 4.30
787 2161 2.354199 CGACTAGTACTCCTTCCGTTCC 59.646 54.545 0.00 0.00 0.00 3.62
793 2167 4.981812 AGTACTCCTTCCGTTCCAAAAAT 58.018 39.130 0.00 0.00 0.00 1.82
796 2170 5.959618 ACTCCTTCCGTTCCAAAAATAAG 57.040 39.130 0.00 0.00 0.00 1.73
797 2171 5.382616 ACTCCTTCCGTTCCAAAAATAAGT 58.617 37.500 0.00 0.00 0.00 2.24
798 2172 5.240844 ACTCCTTCCGTTCCAAAAATAAGTG 59.759 40.000 0.00 0.00 0.00 3.16
800 2174 5.239963 TCCTTCCGTTCCAAAAATAAGTGTC 59.760 40.000 0.00 0.00 0.00 3.67
801 2175 5.009210 CCTTCCGTTCCAAAAATAAGTGTCA 59.991 40.000 0.00 0.00 0.00 3.58
802 2176 5.427036 TCCGTTCCAAAAATAAGTGTCAC 57.573 39.130 0.00 0.00 0.00 3.67
805 2179 5.457473 CCGTTCCAAAAATAAGTGTCACAAC 59.543 40.000 5.62 0.00 0.00 3.32
808 2182 7.274686 CGTTCCAAAAATAAGTGTCACAACTTT 59.725 33.333 5.62 0.00 40.77 2.66
840 2214 9.511272 AACTTATTTTTGGGACGACTTTATACT 57.489 29.630 0.00 0.00 0.00 2.12
845 2219 8.907222 TTTTTGGGACGACTTTATACTAACTT 57.093 30.769 0.00 0.00 0.00 2.66
846 2220 9.995003 TTTTTGGGACGACTTTATACTAACTTA 57.005 29.630 0.00 0.00 0.00 2.24
859 2233 9.956640 TTTATACTAACTTATTTTTGGGACGGA 57.043 29.630 0.00 0.00 0.00 4.69
861 2235 6.812879 ACTAACTTATTTTTGGGACGGAAG 57.187 37.500 0.00 0.00 0.00 3.46
952 3254 3.140623 CCTTGTTTTGGGCTTCCATTTG 58.859 45.455 0.00 0.00 40.80 2.32
961 3263 0.820226 GCTTCCATTTGCCCTCTTCC 59.180 55.000 0.00 0.00 0.00 3.46
982 3287 1.804372 CGTTATCCAGTCCAGCAGAGC 60.804 57.143 0.00 0.00 0.00 4.09
1059 3391 1.241990 TGGACGACGAAGACCTCCTG 61.242 60.000 0.00 0.00 0.00 3.86
1248 3584 1.206371 CCCGTCCATTTCGAACCTACT 59.794 52.381 0.00 0.00 0.00 2.57
1302 3638 2.289072 CCTATCATTTCCCATCGACGCT 60.289 50.000 0.00 0.00 0.00 5.07
1423 3768 2.362120 ACCACCTAGACGTCCCCG 60.362 66.667 13.01 1.58 40.83 5.73
1533 3880 3.720920 GCAACAGCGACATACAACTTACG 60.721 47.826 0.00 0.00 0.00 3.18
1602 3950 2.355837 GTGTCGACGCTGCTTCCA 60.356 61.111 21.55 0.00 0.00 3.53
1773 4140 0.319211 TGGACGTCGATGTCAACACC 60.319 55.000 32.66 19.70 40.72 4.16
1839 4212 2.438411 CTCTTCCTGTCGGACTACTGT 58.562 52.381 9.88 0.00 39.60 3.55
1878 4251 0.318441 AGACGGACTGTGATGGTGTG 59.682 55.000 0.00 0.00 0.00 3.82
1936 4309 4.946157 ACAAGCTACTTTCCATGAATCCAG 59.054 41.667 0.00 0.00 0.00 3.86
1937 4310 5.188434 CAAGCTACTTTCCATGAATCCAGA 58.812 41.667 0.00 0.00 0.00 3.86
1938 4311 5.033589 AGCTACTTTCCATGAATCCAGAG 57.966 43.478 0.00 0.00 0.00 3.35
2310 4815 6.657966 TGCGTGTATATATCTAGTTAGTGCCT 59.342 38.462 0.00 0.00 0.00 4.75
2315 4820 8.837737 TGTATATATCTAGTTAGTGCCTCCTCT 58.162 37.037 0.00 0.00 0.00 3.69
2321 4826 3.100671 AGTTAGTGCCTCCTCTTACCTG 58.899 50.000 0.00 0.00 0.00 4.00
2326 4831 3.261137 AGTGCCTCCTCTTACCTGTTTAC 59.739 47.826 0.00 0.00 0.00 2.01
2365 4870 7.106239 TCTCATTGGTTCTTTGACTTCCTATC 58.894 38.462 0.00 0.00 0.00 2.08
2484 5031 8.491045 TGAAATATTTTCCTTTCCTGTCCTTT 57.509 30.769 1.43 0.00 31.74 3.11
2514 5074 3.743567 TTTTGTTTTTGCTGCTTGCTG 57.256 38.095 0.00 0.00 43.37 4.41
2529 5089 2.073117 TGCTGCATTGCATTCAGTTG 57.927 45.000 12.53 0.00 38.13 3.16
2533 5094 3.249080 GCTGCATTGCATTCAGTTGTTTT 59.751 39.130 12.53 0.00 38.13 2.43
2534 5095 4.768145 CTGCATTGCATTCAGTTGTTTTG 58.232 39.130 12.53 0.00 38.13 2.44
2535 5096 4.190001 TGCATTGCATTCAGTTGTTTTGT 58.810 34.783 7.38 0.00 31.71 2.83
2536 5097 4.634883 TGCATTGCATTCAGTTGTTTTGTT 59.365 33.333 7.38 0.00 31.71 2.83
2553 5114 9.869844 TTGTTTTGTTTTCTGTGTTTATTTGTG 57.130 25.926 0.00 0.00 0.00 3.33
2605 5166 6.939132 ATTTGTTGTTCCATCAATGCAAAA 57.061 29.167 0.00 0.00 31.87 2.44
2681 5244 5.055812 TGGGTTTGCAATTTCTTTCACATC 58.944 37.500 0.00 0.00 0.00 3.06
2698 5261 5.198207 TCACATCATTGCTCATTCAGGATT 58.802 37.500 0.00 0.00 0.00 3.01
2739 5303 5.552807 TCGCTTGCGTTGTTATTGTATAAC 58.447 37.500 14.70 3.25 0.00 1.89
2777 5341 6.319399 AGCGGTTTGGTTAAATATTTTCTCG 58.681 36.000 5.91 2.02 0.00 4.04
2796 5362 4.404394 TCTCGGCATACCTCTATTTGTGAA 59.596 41.667 0.00 0.00 0.00 3.18
2887 6895 1.379710 CATTCGGCCATTCCCCACA 60.380 57.895 2.24 0.00 0.00 4.17
2889 6897 0.032217 ATTCGGCCATTCCCCACATT 60.032 50.000 2.24 0.00 0.00 2.71
3014 7026 7.269297 GTGCAGTCTATTTTCTTCGATTTTGAC 59.731 37.037 0.00 0.00 0.00 3.18
3030 7043 6.310224 CGATTTTGACCATTGGGATGTTTAAC 59.690 38.462 7.78 0.00 38.05 2.01
3036 7049 7.158021 TGACCATTGGGATGTTTAACATTTTC 58.842 34.615 12.13 0.41 39.27 2.29
3068 7081 6.500684 ACGCATGATAAAATTGACAAGACT 57.499 33.333 0.00 0.00 0.00 3.24
3109 7122 9.331282 ACTTGAGAATATGCTAACAATAGGAAC 57.669 33.333 0.00 0.00 32.82 3.62
3110 7123 8.677148 TTGAGAATATGCTAACAATAGGAACC 57.323 34.615 0.00 0.00 32.82 3.62
3133 7146 3.366052 AGGTGTGCCCCTACAAATTAG 57.634 47.619 0.00 0.00 31.31 1.73
3141 7154 5.066505 GTGCCCCTACAAATTAGTTGATCTG 59.933 44.000 0.00 0.00 39.87 2.90
3148 7161 9.113838 CCTACAAATTAGTTGATCTGCTATTGT 57.886 33.333 0.00 14.45 39.87 2.71
3198 7212 8.175925 TGTCCAATAATTCTGTGTTGATTCAA 57.824 30.769 0.00 0.00 0.00 2.69
3215 7229 6.284459 TGATTCAATTTTAACCTTTTGGCGT 58.716 32.000 0.00 0.00 45.59 5.68
3229 7243 5.176774 CCTTTTGGCGTAATTTCCAGTTTTC 59.823 40.000 0.00 0.00 33.32 2.29
3230 7244 3.926821 TGGCGTAATTTCCAGTTTTCC 57.073 42.857 0.00 0.00 0.00 3.13
3231 7245 3.223435 TGGCGTAATTTCCAGTTTTCCA 58.777 40.909 0.00 0.00 0.00 3.53
3232 7246 3.004944 TGGCGTAATTTCCAGTTTTCCAC 59.995 43.478 0.00 0.00 0.00 4.02
3234 7248 4.500035 GGCGTAATTTCCAGTTTTCCACAA 60.500 41.667 0.00 0.00 0.00 3.33
3235 7249 5.044558 GCGTAATTTCCAGTTTTCCACAAA 58.955 37.500 0.00 0.00 0.00 2.83
3236 7250 5.694458 GCGTAATTTCCAGTTTTCCACAAAT 59.306 36.000 0.00 0.00 0.00 2.32
3237 7251 6.346518 GCGTAATTTCCAGTTTTCCACAAATG 60.347 38.462 0.00 0.00 0.00 2.32
3238 7252 6.699642 CGTAATTTCCAGTTTTCCACAAATGT 59.300 34.615 0.00 0.00 0.00 2.71
3239 7253 7.223777 CGTAATTTCCAGTTTTCCACAAATGTT 59.776 33.333 0.00 0.00 0.00 2.71
3240 7254 6.923928 ATTTCCAGTTTTCCACAAATGTTG 57.076 33.333 0.00 0.00 0.00 3.33
3253 7267 6.040955 TCCACAAATGTTGGCTAATGTTTACA 59.959 34.615 0.00 0.00 34.12 2.41
3263 7277 7.517614 TGGCTAATGTTTACAGTTTGAATCA 57.482 32.000 0.00 0.00 0.00 2.57
3291 7305 7.379529 ACAAAAATTGTGAGATAAGTTTGAGCG 59.620 33.333 0.00 0.00 43.48 5.03
3358 7373 1.055849 TTGCTCTGCAGGTACCAAGA 58.944 50.000 15.94 12.65 40.61 3.02
3359 7374 0.610174 TGCTCTGCAGGTACCAAGAG 59.390 55.000 24.53 24.53 33.32 2.85
3369 7384 5.221843 TGCAGGTACCAAGAGTTACATTTCT 60.222 40.000 15.94 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.804193 GTAGCTTGCCGTGCAGCC 61.804 66.667 0.00 4.34 40.61 4.85
5 6 2.315038 GATGTAGCTTGCCGTGCAGC 62.315 60.000 0.00 10.15 40.61 5.25
6 7 0.742281 AGATGTAGCTTGCCGTGCAG 60.742 55.000 0.00 0.00 40.61 4.41
7 8 0.534873 TAGATGTAGCTTGCCGTGCA 59.465 50.000 0.00 0.00 36.47 4.57
8 9 1.795286 GATAGATGTAGCTTGCCGTGC 59.205 52.381 0.00 0.00 0.00 5.34
9 10 3.243535 TGAGATAGATGTAGCTTGCCGTG 60.244 47.826 0.00 0.00 0.00 4.94
10 11 2.959030 TGAGATAGATGTAGCTTGCCGT 59.041 45.455 0.00 0.00 0.00 5.68
11 12 3.573598 CTGAGATAGATGTAGCTTGCCG 58.426 50.000 0.00 0.00 0.00 5.69
12 13 3.006752 AGCTGAGATAGATGTAGCTTGCC 59.993 47.826 0.00 0.00 41.60 4.52
13 14 4.255833 AGCTGAGATAGATGTAGCTTGC 57.744 45.455 0.00 6.14 41.60 4.01
16 17 4.039004 CACCAAGCTGAGATAGATGTAGCT 59.961 45.833 0.00 0.00 45.87 3.32
17 18 4.305769 CACCAAGCTGAGATAGATGTAGC 58.694 47.826 0.00 0.00 34.71 3.58
18 19 4.586421 TCCACCAAGCTGAGATAGATGTAG 59.414 45.833 0.00 0.00 0.00 2.74
19 20 4.546674 TCCACCAAGCTGAGATAGATGTA 58.453 43.478 0.00 0.00 0.00 2.29
20 21 3.378512 TCCACCAAGCTGAGATAGATGT 58.621 45.455 0.00 0.00 0.00 3.06
21 22 4.125703 GTTCCACCAAGCTGAGATAGATG 58.874 47.826 0.00 0.00 0.00 2.90
22 23 3.776969 TGTTCCACCAAGCTGAGATAGAT 59.223 43.478 0.00 0.00 0.00 1.98
23 24 3.173151 TGTTCCACCAAGCTGAGATAGA 58.827 45.455 0.00 0.00 0.00 1.98
24 25 3.616956 TGTTCCACCAAGCTGAGATAG 57.383 47.619 0.00 0.00 0.00 2.08
25 26 4.202461 ACTTTGTTCCACCAAGCTGAGATA 60.202 41.667 0.00 0.00 0.00 1.98
26 27 2.957402 TTGTTCCACCAAGCTGAGAT 57.043 45.000 0.00 0.00 0.00 2.75
27 28 2.092429 ACTTTGTTCCACCAAGCTGAGA 60.092 45.455 0.00 0.00 0.00 3.27
28 29 2.033801 CACTTTGTTCCACCAAGCTGAG 59.966 50.000 0.00 0.00 0.00 3.35
29 30 2.023673 CACTTTGTTCCACCAAGCTGA 58.976 47.619 0.00 0.00 0.00 4.26
30 31 1.067516 CCACTTTGTTCCACCAAGCTG 59.932 52.381 0.00 0.00 0.00 4.24
31 32 1.402787 CCACTTTGTTCCACCAAGCT 58.597 50.000 0.00 0.00 0.00 3.74
32 33 0.249447 GCCACTTTGTTCCACCAAGC 60.249 55.000 0.00 0.00 0.00 4.01
33 34 1.110442 TGCCACTTTGTTCCACCAAG 58.890 50.000 0.00 0.00 0.00 3.61
34 35 1.561643 TTGCCACTTTGTTCCACCAA 58.438 45.000 0.00 0.00 0.00 3.67
35 36 1.480137 CTTTGCCACTTTGTTCCACCA 59.520 47.619 0.00 0.00 0.00 4.17
36 37 1.806247 GCTTTGCCACTTTGTTCCACC 60.806 52.381 0.00 0.00 0.00 4.61
37 38 1.136891 AGCTTTGCCACTTTGTTCCAC 59.863 47.619 0.00 0.00 0.00 4.02
38 39 1.484038 AGCTTTGCCACTTTGTTCCA 58.516 45.000 0.00 0.00 0.00 3.53
39 40 3.726291 TTAGCTTTGCCACTTTGTTCC 57.274 42.857 0.00 0.00 0.00 3.62
40 41 4.932146 TCTTTAGCTTTGCCACTTTGTTC 58.068 39.130 0.00 0.00 0.00 3.18
41 42 5.337578 TTCTTTAGCTTTGCCACTTTGTT 57.662 34.783 0.00 0.00 0.00 2.83
42 43 5.337578 TTTCTTTAGCTTTGCCACTTTGT 57.662 34.783 0.00 0.00 0.00 2.83
43 44 6.660887 TTTTTCTTTAGCTTTGCCACTTTG 57.339 33.333 0.00 0.00 0.00 2.77
63 64 2.021457 CGTCCACTTGGTGTCCTTTTT 58.979 47.619 0.00 0.00 36.34 1.94
64 65 1.210967 TCGTCCACTTGGTGTCCTTTT 59.789 47.619 0.00 0.00 36.34 2.27
65 66 0.834612 TCGTCCACTTGGTGTCCTTT 59.165 50.000 0.00 0.00 36.34 3.11
66 67 0.834612 TTCGTCCACTTGGTGTCCTT 59.165 50.000 0.00 0.00 36.34 3.36
67 68 1.056660 ATTCGTCCACTTGGTGTCCT 58.943 50.000 0.00 0.00 36.34 3.85
68 69 1.156736 CATTCGTCCACTTGGTGTCC 58.843 55.000 0.00 0.00 36.34 4.02
69 70 0.517316 GCATTCGTCCACTTGGTGTC 59.483 55.000 0.00 0.00 36.34 3.67
70 71 0.108585 AGCATTCGTCCACTTGGTGT 59.891 50.000 0.00 0.00 36.34 4.16
71 72 0.798776 GAGCATTCGTCCACTTGGTG 59.201 55.000 0.00 0.00 36.34 4.17
72 73 0.687354 AGAGCATTCGTCCACTTGGT 59.313 50.000 0.00 0.00 36.34 3.67
73 74 1.081892 CAGAGCATTCGTCCACTTGG 58.918 55.000 0.00 0.00 0.00 3.61
74 75 0.445436 GCAGAGCATTCGTCCACTTG 59.555 55.000 0.00 0.00 0.00 3.16
75 76 1.016130 CGCAGAGCATTCGTCCACTT 61.016 55.000 0.00 0.00 0.00 3.16
76 77 1.446792 CGCAGAGCATTCGTCCACT 60.447 57.895 0.00 0.00 0.00 4.00
77 78 2.456119 CCGCAGAGCATTCGTCCAC 61.456 63.158 0.00 0.00 0.00 4.02
78 79 2.125552 CCGCAGAGCATTCGTCCA 60.126 61.111 0.00 0.00 0.00 4.02
79 80 3.567797 GCCGCAGAGCATTCGTCC 61.568 66.667 0.00 0.00 0.00 4.79
80 81 2.806856 CTGCCGCAGAGCATTCGTC 61.807 63.158 15.74 0.00 43.09 4.20
81 82 2.816958 CTGCCGCAGAGCATTCGT 60.817 61.111 15.74 0.00 43.09 3.85
82 83 1.915614 AAACTGCCGCAGAGCATTCG 61.916 55.000 27.12 0.00 43.09 3.34
83 84 1.086696 TAAACTGCCGCAGAGCATTC 58.913 50.000 27.12 0.00 43.09 2.67
84 85 0.804989 GTAAACTGCCGCAGAGCATT 59.195 50.000 27.12 16.37 43.09 3.56
85 86 0.321564 TGTAAACTGCCGCAGAGCAT 60.322 50.000 27.12 11.43 43.09 3.79
86 87 0.321564 ATGTAAACTGCCGCAGAGCA 60.322 50.000 27.12 17.54 41.46 4.26
87 88 0.375106 GATGTAAACTGCCGCAGAGC 59.625 55.000 27.12 12.96 35.18 4.09
88 89 0.647410 CGATGTAAACTGCCGCAGAG 59.353 55.000 27.12 2.38 35.18 3.35
89 90 1.358725 GCGATGTAAACTGCCGCAGA 61.359 55.000 27.12 4.15 44.55 4.26
90 91 1.060937 GCGATGTAAACTGCCGCAG 59.939 57.895 19.08 19.08 44.55 5.18
91 92 2.735677 CGCGATGTAAACTGCCGCA 61.736 57.895 0.00 0.00 45.32 5.69
92 93 2.021380 CGCGATGTAAACTGCCGC 59.979 61.111 0.00 0.00 42.11 6.53
93 94 1.058748 CACGCGATGTAAACTGCCG 59.941 57.895 15.93 0.00 0.00 5.69
94 95 1.017177 TCCACGCGATGTAAACTGCC 61.017 55.000 15.93 0.00 0.00 4.85
95 96 0.793861 TTCCACGCGATGTAAACTGC 59.206 50.000 15.93 0.00 0.00 4.40
96 97 5.403897 AATATTCCACGCGATGTAAACTG 57.596 39.130 15.93 0.00 0.00 3.16
97 98 5.220777 CCAAATATTCCACGCGATGTAAACT 60.221 40.000 15.93 0.00 0.00 2.66
98 99 4.967575 CCAAATATTCCACGCGATGTAAAC 59.032 41.667 15.93 0.00 0.00 2.01
99 100 4.496673 GCCAAATATTCCACGCGATGTAAA 60.497 41.667 15.93 4.79 0.00 2.01
100 101 3.002862 GCCAAATATTCCACGCGATGTAA 59.997 43.478 15.93 0.54 0.00 2.41
101 102 2.546368 GCCAAATATTCCACGCGATGTA 59.454 45.455 15.93 0.00 0.00 2.29
102 103 1.333619 GCCAAATATTCCACGCGATGT 59.666 47.619 15.93 0.00 0.00 3.06
103 104 1.603802 AGCCAAATATTCCACGCGATG 59.396 47.619 15.93 7.49 0.00 3.84
104 105 1.967319 AGCCAAATATTCCACGCGAT 58.033 45.000 15.93 0.00 0.00 4.58
105 106 1.400142 CAAGCCAAATATTCCACGCGA 59.600 47.619 15.93 0.00 0.00 5.87
106 107 1.400142 TCAAGCCAAATATTCCACGCG 59.600 47.619 3.53 3.53 0.00 6.01
107 108 2.682856 TCTCAAGCCAAATATTCCACGC 59.317 45.455 0.00 0.00 0.00 5.34
108 109 4.191544 TCTCTCAAGCCAAATATTCCACG 58.808 43.478 0.00 0.00 0.00 4.94
109 110 6.515272 TTTCTCTCAAGCCAAATATTCCAC 57.485 37.500 0.00 0.00 0.00 4.02
110 111 8.274322 TCTATTTCTCTCAAGCCAAATATTCCA 58.726 33.333 0.00 0.00 0.00 3.53
111 112 8.682936 TCTATTTCTCTCAAGCCAAATATTCC 57.317 34.615 0.00 0.00 0.00 3.01
113 114 9.129532 CCTTCTATTTCTCTCAAGCCAAATATT 57.870 33.333 0.00 0.00 0.00 1.28
114 115 8.497745 TCCTTCTATTTCTCTCAAGCCAAATAT 58.502 33.333 0.00 0.00 0.00 1.28
115 116 7.861629 TCCTTCTATTTCTCTCAAGCCAAATA 58.138 34.615 0.00 0.00 0.00 1.40
116 117 6.725364 TCCTTCTATTTCTCTCAAGCCAAAT 58.275 36.000 0.00 0.00 0.00 2.32
117 118 6.126863 TCCTTCTATTTCTCTCAAGCCAAA 57.873 37.500 0.00 0.00 0.00 3.28
118 119 5.762179 TCCTTCTATTTCTCTCAAGCCAA 57.238 39.130 0.00 0.00 0.00 4.52
119 120 5.664908 AGATCCTTCTATTTCTCTCAAGCCA 59.335 40.000 0.00 0.00 0.00 4.75
120 121 6.173427 AGATCCTTCTATTTCTCTCAAGCC 57.827 41.667 0.00 0.00 0.00 4.35
121 122 9.606631 TTAAAGATCCTTCTATTTCTCTCAAGC 57.393 33.333 0.00 0.00 0.00 4.01
124 125 9.494055 TCCTTAAAGATCCTTCTATTTCTCTCA 57.506 33.333 0.00 0.00 0.00 3.27
131 132 9.844257 CACTGAATCCTTAAAGATCCTTCTATT 57.156 33.333 0.00 0.00 0.00 1.73
132 133 7.936301 GCACTGAATCCTTAAAGATCCTTCTAT 59.064 37.037 0.00 0.00 0.00 1.98
133 134 7.092891 TGCACTGAATCCTTAAAGATCCTTCTA 60.093 37.037 0.00 0.00 0.00 2.10
134 135 6.118852 GCACTGAATCCTTAAAGATCCTTCT 58.881 40.000 0.00 0.00 0.00 2.85
135 136 5.882557 TGCACTGAATCCTTAAAGATCCTTC 59.117 40.000 0.00 0.00 0.00 3.46
136 137 5.819991 TGCACTGAATCCTTAAAGATCCTT 58.180 37.500 0.00 0.00 0.00 3.36
137 138 5.441718 TGCACTGAATCCTTAAAGATCCT 57.558 39.130 0.00 0.00 0.00 3.24
138 139 6.545298 AGATTGCACTGAATCCTTAAAGATCC 59.455 38.462 0.00 0.00 33.46 3.36
139 140 7.565323 AGATTGCACTGAATCCTTAAAGATC 57.435 36.000 0.00 0.00 33.46 2.75
140 141 7.951347 AAGATTGCACTGAATCCTTAAAGAT 57.049 32.000 0.00 0.00 33.46 2.40
143 144 8.826710 CGTATAAGATTGCACTGAATCCTTAAA 58.173 33.333 0.00 0.00 33.46 1.52
144 145 7.441157 CCGTATAAGATTGCACTGAATCCTTAA 59.559 37.037 0.00 0.00 33.46 1.85
145 146 6.929049 CCGTATAAGATTGCACTGAATCCTTA 59.071 38.462 0.00 0.00 33.46 2.69
146 147 5.760253 CCGTATAAGATTGCACTGAATCCTT 59.240 40.000 0.00 0.00 33.46 3.36
147 148 5.070446 TCCGTATAAGATTGCACTGAATCCT 59.930 40.000 0.00 0.00 33.46 3.24
148 149 5.177696 GTCCGTATAAGATTGCACTGAATCC 59.822 44.000 0.00 0.00 33.46 3.01
149 150 5.107837 CGTCCGTATAAGATTGCACTGAATC 60.108 44.000 0.00 0.00 33.21 2.52
150 151 4.745125 CGTCCGTATAAGATTGCACTGAAT 59.255 41.667 0.00 0.00 0.00 2.57
151 152 4.109766 CGTCCGTATAAGATTGCACTGAA 58.890 43.478 0.00 0.00 0.00 3.02
152 153 3.129813 ACGTCCGTATAAGATTGCACTGA 59.870 43.478 0.00 0.00 0.00 3.41
153 154 3.444916 ACGTCCGTATAAGATTGCACTG 58.555 45.455 0.00 0.00 0.00 3.66
154 155 3.795623 ACGTCCGTATAAGATTGCACT 57.204 42.857 0.00 0.00 0.00 4.40
155 156 4.110482 AGAACGTCCGTATAAGATTGCAC 58.890 43.478 0.00 0.00 0.00 4.57
156 157 4.380841 AGAACGTCCGTATAAGATTGCA 57.619 40.909 0.00 0.00 0.00 4.08
157 158 7.404139 AATAAGAACGTCCGTATAAGATTGC 57.596 36.000 0.00 0.00 0.00 3.56
158 159 9.888878 TCTAATAAGAACGTCCGTATAAGATTG 57.111 33.333 0.00 0.00 0.00 2.67
160 161 8.235905 GCTCTAATAAGAACGTCCGTATAAGAT 58.764 37.037 0.00 0.00 0.00 2.40
161 162 7.443575 AGCTCTAATAAGAACGTCCGTATAAGA 59.556 37.037 0.00 0.00 0.00 2.10
162 163 7.583230 AGCTCTAATAAGAACGTCCGTATAAG 58.417 38.462 0.00 0.00 0.00 1.73
163 164 7.502120 AGCTCTAATAAGAACGTCCGTATAA 57.498 36.000 0.00 0.00 0.00 0.98
164 165 7.332926 CCTAGCTCTAATAAGAACGTCCGTATA 59.667 40.741 0.00 0.00 0.00 1.47
165 166 6.149142 CCTAGCTCTAATAAGAACGTCCGTAT 59.851 42.308 0.00 0.00 0.00 3.06
166 167 5.468072 CCTAGCTCTAATAAGAACGTCCGTA 59.532 44.000 0.00 0.00 0.00 4.02
167 168 4.275443 CCTAGCTCTAATAAGAACGTCCGT 59.725 45.833 0.00 0.00 0.00 4.69
168 169 4.320348 CCCTAGCTCTAATAAGAACGTCCG 60.320 50.000 0.00 0.00 0.00 4.79
169 170 4.826183 TCCCTAGCTCTAATAAGAACGTCC 59.174 45.833 0.00 0.00 0.00 4.79
170 171 6.207025 TCATCCCTAGCTCTAATAAGAACGTC 59.793 42.308 0.00 0.00 0.00 4.34
171 172 6.016108 GTCATCCCTAGCTCTAATAAGAACGT 60.016 42.308 0.00 0.00 0.00 3.99
172 173 6.016192 TGTCATCCCTAGCTCTAATAAGAACG 60.016 42.308 0.00 0.00 0.00 3.95
173 174 7.291411 TGTCATCCCTAGCTCTAATAAGAAC 57.709 40.000 0.00 0.00 0.00 3.01
174 175 8.497910 AATGTCATCCCTAGCTCTAATAAGAA 57.502 34.615 0.00 0.00 0.00 2.52
175 176 9.249053 CTAATGTCATCCCTAGCTCTAATAAGA 57.751 37.037 0.00 0.00 0.00 2.10
176 177 7.978975 GCTAATGTCATCCCTAGCTCTAATAAG 59.021 40.741 7.49 0.00 35.06 1.73
177 178 7.093289 GGCTAATGTCATCCCTAGCTCTAATAA 60.093 40.741 12.57 0.00 37.51 1.40
178 179 6.381420 GGCTAATGTCATCCCTAGCTCTAATA 59.619 42.308 12.57 0.00 37.51 0.98
179 180 5.188751 GGCTAATGTCATCCCTAGCTCTAAT 59.811 44.000 12.57 0.00 37.51 1.73
180 181 4.528596 GGCTAATGTCATCCCTAGCTCTAA 59.471 45.833 12.57 0.00 37.51 2.10
181 182 4.090090 GGCTAATGTCATCCCTAGCTCTA 58.910 47.826 12.57 0.00 37.51 2.43
182 183 2.903135 GGCTAATGTCATCCCTAGCTCT 59.097 50.000 12.57 0.00 37.51 4.09
183 184 2.903135 AGGCTAATGTCATCCCTAGCTC 59.097 50.000 12.57 5.64 37.51 4.09
184 185 2.903135 GAGGCTAATGTCATCCCTAGCT 59.097 50.000 12.57 0.00 37.51 3.32
185 186 2.027653 GGAGGCTAATGTCATCCCTAGC 60.028 54.545 6.50 6.50 36.79 3.42
186 187 3.515562 AGGAGGCTAATGTCATCCCTAG 58.484 50.000 0.00 0.00 0.00 3.02
187 188 3.637821 AGGAGGCTAATGTCATCCCTA 57.362 47.619 0.00 0.00 0.00 3.53
188 189 2.503869 AGGAGGCTAATGTCATCCCT 57.496 50.000 0.00 0.61 0.00 4.20
189 190 3.481453 GAAAGGAGGCTAATGTCATCCC 58.519 50.000 0.00 0.00 0.00 3.85
190 191 3.134458 CGAAAGGAGGCTAATGTCATCC 58.866 50.000 0.00 0.00 0.00 3.51
206 207 0.830648 TACTCCCATGCCTCCGAAAG 59.169 55.000 0.00 0.00 0.00 2.62
207 208 0.830648 CTACTCCCATGCCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
208 209 0.325296 ACTACTCCCATGCCTCCGAA 60.325 55.000 0.00 0.00 0.00 4.30
209 210 0.554305 TACTACTCCCATGCCTCCGA 59.446 55.000 0.00 0.00 0.00 4.55
210 211 0.962489 CTACTACTCCCATGCCTCCG 59.038 60.000 0.00 0.00 0.00 4.63
211 212 1.343069 CCTACTACTCCCATGCCTCC 58.657 60.000 0.00 0.00 0.00 4.30
212 213 1.689273 CACCTACTACTCCCATGCCTC 59.311 57.143 0.00 0.00 0.00 4.70
213 214 1.291033 TCACCTACTACTCCCATGCCT 59.709 52.381 0.00 0.00 0.00 4.75
214 215 1.789523 TCACCTACTACTCCCATGCC 58.210 55.000 0.00 0.00 0.00 4.40
215 216 2.300437 GGATCACCTACTACTCCCATGC 59.700 54.545 0.00 0.00 0.00 4.06
216 217 2.558795 CGGATCACCTACTACTCCCATG 59.441 54.545 0.00 0.00 0.00 3.66
217 218 2.445905 TCGGATCACCTACTACTCCCAT 59.554 50.000 0.00 0.00 0.00 4.00
218 219 1.848388 TCGGATCACCTACTACTCCCA 59.152 52.381 0.00 0.00 0.00 4.37
219 220 2.158638 ACTCGGATCACCTACTACTCCC 60.159 54.545 0.00 0.00 0.00 4.30
220 221 3.211718 ACTCGGATCACCTACTACTCC 57.788 52.381 0.00 0.00 0.00 3.85
221 222 3.747529 GCTACTCGGATCACCTACTACTC 59.252 52.174 0.00 0.00 0.00 2.59
222 223 3.742385 GCTACTCGGATCACCTACTACT 58.258 50.000 0.00 0.00 0.00 2.57
223 224 2.479656 CGCTACTCGGATCACCTACTAC 59.520 54.545 0.00 0.00 33.78 2.73
224 225 2.763933 CGCTACTCGGATCACCTACTA 58.236 52.381 0.00 0.00 33.78 1.82
225 226 1.595466 CGCTACTCGGATCACCTACT 58.405 55.000 0.00 0.00 33.78 2.57
236 237 1.135916 GCTATACAGCTCCGCTACTCG 60.136 57.143 0.00 0.00 44.93 4.18
237 238 2.622546 GCTATACAGCTCCGCTACTC 57.377 55.000 0.00 0.00 44.93 2.59
249 250 5.763355 ACAGTAACCTAGGACTGCTATACA 58.237 41.667 23.97 0.00 45.76 2.29
250 251 6.712179 AACAGTAACCTAGGACTGCTATAC 57.288 41.667 23.97 11.76 45.76 1.47
251 252 7.284034 GTGTAACAGTAACCTAGGACTGCTATA 59.716 40.741 23.97 14.99 45.76 1.31
252 253 6.096564 GTGTAACAGTAACCTAGGACTGCTAT 59.903 42.308 23.97 15.61 45.76 2.97
253 254 5.416952 GTGTAACAGTAACCTAGGACTGCTA 59.583 44.000 23.97 16.46 45.76 3.49
254 255 4.220163 GTGTAACAGTAACCTAGGACTGCT 59.780 45.833 23.97 17.30 45.76 4.24
255 256 4.220163 AGTGTAACAGTAACCTAGGACTGC 59.780 45.833 23.97 12.67 45.76 4.40
256 257 5.711036 AGAGTGTAACAGTAACCTAGGACTG 59.289 44.000 22.93 22.93 46.95 3.51
257 258 5.711036 CAGAGTGTAACAGTAACCTAGGACT 59.289 44.000 17.98 6.53 41.43 3.85
258 259 5.621781 GCAGAGTGTAACAGTAACCTAGGAC 60.622 48.000 17.98 3.77 41.43 3.85
259 260 4.461781 GCAGAGTGTAACAGTAACCTAGGA 59.538 45.833 17.98 0.00 41.43 2.94
260 261 4.463186 AGCAGAGTGTAACAGTAACCTAGG 59.537 45.833 7.41 7.41 41.43 3.02
261 262 5.646577 AGCAGAGTGTAACAGTAACCTAG 57.353 43.478 0.00 0.00 41.43 3.02
262 263 5.047519 GGAAGCAGAGTGTAACAGTAACCTA 60.048 44.000 0.00 0.00 41.43 3.08
263 264 4.262506 GGAAGCAGAGTGTAACAGTAACCT 60.263 45.833 0.00 0.00 41.43 3.50
264 265 3.995048 GGAAGCAGAGTGTAACAGTAACC 59.005 47.826 0.00 0.00 41.43 2.85
265 266 3.995048 GGGAAGCAGAGTGTAACAGTAAC 59.005 47.826 0.00 0.00 41.43 2.50
266 267 3.007614 GGGGAAGCAGAGTGTAACAGTAA 59.992 47.826 0.00 0.00 41.43 2.24
267 268 2.565834 GGGGAAGCAGAGTGTAACAGTA 59.434 50.000 0.00 0.00 41.43 2.74
268 269 1.348036 GGGGAAGCAGAGTGTAACAGT 59.652 52.381 0.00 0.00 41.43 3.55
269 270 1.339151 GGGGGAAGCAGAGTGTAACAG 60.339 57.143 0.00 0.00 41.43 3.16
270 271 0.690762 GGGGGAAGCAGAGTGTAACA 59.309 55.000 0.00 0.00 41.43 2.41
271 272 3.553109 GGGGGAAGCAGAGTGTAAC 57.447 57.895 0.00 0.00 0.00 2.50
286 287 1.771255 CTGAGGAACAGGATTAGGGGG 59.229 57.143 0.00 0.00 42.39 5.40
317 318 4.212716 GAGGGGGAAAACTGTACAAAGTT 58.787 43.478 0.00 0.00 42.21 2.66
318 319 3.436035 GGAGGGGGAAAACTGTACAAAGT 60.436 47.826 0.00 0.00 0.00 2.66
319 320 3.154710 GGAGGGGGAAAACTGTACAAAG 58.845 50.000 0.00 0.00 0.00 2.77
320 321 2.787035 AGGAGGGGGAAAACTGTACAAA 59.213 45.455 0.00 0.00 0.00 2.83
321 322 2.424793 AGGAGGGGGAAAACTGTACAA 58.575 47.619 0.00 0.00 0.00 2.41
322 323 2.127651 AGGAGGGGGAAAACTGTACA 57.872 50.000 0.00 0.00 0.00 2.90
323 324 5.963214 TTATAGGAGGGGGAAAACTGTAC 57.037 43.478 0.00 0.00 0.00 2.90
324 325 6.214278 TCATTATAGGAGGGGGAAAACTGTA 58.786 40.000 0.00 0.00 0.00 2.74
325 326 5.043762 TCATTATAGGAGGGGGAAAACTGT 58.956 41.667 0.00 0.00 0.00 3.55
326 327 5.646692 TCATTATAGGAGGGGGAAAACTG 57.353 43.478 0.00 0.00 0.00 3.16
327 328 6.668133 TTTCATTATAGGAGGGGGAAAACT 57.332 37.500 0.00 0.00 0.00 2.66
328 329 7.147724 CCTTTTTCATTATAGGAGGGGGAAAAC 60.148 40.741 0.00 0.00 33.89 2.43
329 330 6.900743 CCTTTTTCATTATAGGAGGGGGAAAA 59.099 38.462 0.00 0.00 32.74 2.29
330 331 6.440354 CCTTTTTCATTATAGGAGGGGGAAA 58.560 40.000 0.00 0.00 0.00 3.13
331 332 5.636252 GCCTTTTTCATTATAGGAGGGGGAA 60.636 44.000 0.00 0.00 0.00 3.97
332 333 4.141018 GCCTTTTTCATTATAGGAGGGGGA 60.141 45.833 0.00 0.00 0.00 4.81
333 334 4.152647 GCCTTTTTCATTATAGGAGGGGG 58.847 47.826 0.00 0.00 0.00 5.40
334 335 4.803452 TGCCTTTTTCATTATAGGAGGGG 58.197 43.478 0.00 0.00 0.00 4.79
335 336 5.694995 TCTGCCTTTTTCATTATAGGAGGG 58.305 41.667 0.00 0.00 0.00 4.30
336 337 5.240403 GCTCTGCCTTTTTCATTATAGGAGG 59.760 44.000 0.00 0.00 0.00 4.30
337 338 6.060788 AGCTCTGCCTTTTTCATTATAGGAG 58.939 40.000 0.00 0.00 0.00 3.69
338 339 6.006275 AGCTCTGCCTTTTTCATTATAGGA 57.994 37.500 0.00 0.00 0.00 2.94
339 340 5.240403 GGAGCTCTGCCTTTTTCATTATAGG 59.760 44.000 14.64 0.00 0.00 2.57
340 341 6.017275 CAGGAGCTCTGCCTTTTTCATTATAG 60.017 42.308 14.64 0.00 36.60 1.31
341 342 5.824624 CAGGAGCTCTGCCTTTTTCATTATA 59.175 40.000 14.64 0.00 36.60 0.98
342 343 4.643784 CAGGAGCTCTGCCTTTTTCATTAT 59.356 41.667 14.64 0.00 36.60 1.28
343 344 4.012374 CAGGAGCTCTGCCTTTTTCATTA 58.988 43.478 14.64 0.00 36.60 1.90
344 345 2.824341 CAGGAGCTCTGCCTTTTTCATT 59.176 45.455 14.64 0.00 36.60 2.57
345 346 2.444421 CAGGAGCTCTGCCTTTTTCAT 58.556 47.619 14.64 0.00 36.60 2.57
346 347 1.901591 CAGGAGCTCTGCCTTTTTCA 58.098 50.000 14.64 0.00 36.60 2.69
363 364 1.321474 TTTTTGACCTGAGCTGGCAG 58.679 50.000 10.94 10.94 35.66 4.85
364 365 3.511362 TTTTTGACCTGAGCTGGCA 57.489 47.368 0.00 0.00 0.00 4.92
384 385 6.317642 GGTTGGCATTTTTAGGAACAGTTTTT 59.682 34.615 0.00 0.00 0.00 1.94
385 386 5.820423 GGTTGGCATTTTTAGGAACAGTTTT 59.180 36.000 0.00 0.00 0.00 2.43
386 387 5.104735 TGGTTGGCATTTTTAGGAACAGTTT 60.105 36.000 0.00 0.00 0.00 2.66
387 388 4.407296 TGGTTGGCATTTTTAGGAACAGTT 59.593 37.500 0.00 0.00 0.00 3.16
388 389 3.964031 TGGTTGGCATTTTTAGGAACAGT 59.036 39.130 0.00 0.00 0.00 3.55
389 390 4.306600 GTGGTTGGCATTTTTAGGAACAG 58.693 43.478 0.00 0.00 0.00 3.16
390 391 3.070302 GGTGGTTGGCATTTTTAGGAACA 59.930 43.478 0.00 0.00 0.00 3.18
391 392 3.323691 AGGTGGTTGGCATTTTTAGGAAC 59.676 43.478 0.00 0.00 0.00 3.62
392 393 3.582164 AGGTGGTTGGCATTTTTAGGAA 58.418 40.909 0.00 0.00 0.00 3.36
393 394 3.252554 AGGTGGTTGGCATTTTTAGGA 57.747 42.857 0.00 0.00 0.00 2.94
394 395 4.282195 TGTAAGGTGGTTGGCATTTTTAGG 59.718 41.667 0.00 0.00 0.00 2.69
395 396 5.461032 TGTAAGGTGGTTGGCATTTTTAG 57.539 39.130 0.00 0.00 0.00 1.85
396 397 5.364157 ACTTGTAAGGTGGTTGGCATTTTTA 59.636 36.000 0.00 0.00 0.00 1.52
397 398 4.163268 ACTTGTAAGGTGGTTGGCATTTTT 59.837 37.500 0.00 0.00 0.00 1.94
398 399 3.709141 ACTTGTAAGGTGGTTGGCATTTT 59.291 39.130 0.00 0.00 0.00 1.82
399 400 3.069443 CACTTGTAAGGTGGTTGGCATTT 59.931 43.478 0.00 0.00 0.00 2.32
400 401 2.627699 CACTTGTAAGGTGGTTGGCATT 59.372 45.455 0.00 0.00 0.00 3.56
401 402 2.238521 CACTTGTAAGGTGGTTGGCAT 58.761 47.619 0.00 0.00 0.00 4.40
402 403 1.686355 CACTTGTAAGGTGGTTGGCA 58.314 50.000 0.00 0.00 0.00 4.92
403 404 0.958822 CCACTTGTAAGGTGGTTGGC 59.041 55.000 4.87 0.00 46.42 4.52
409 410 7.882179 AGCTTTAAAATACCACTTGTAAGGTG 58.118 34.615 0.00 0.00 38.87 4.00
410 411 7.722285 TGAGCTTTAAAATACCACTTGTAAGGT 59.278 33.333 0.00 0.00 41.89 3.50
411 412 8.021396 GTGAGCTTTAAAATACCACTTGTAAGG 58.979 37.037 0.00 0.00 31.94 2.69
412 413 8.021396 GGTGAGCTTTAAAATACCACTTGTAAG 58.979 37.037 0.00 0.00 31.94 2.34
413 414 7.308109 CGGTGAGCTTTAAAATACCACTTGTAA 60.308 37.037 0.00 0.00 31.94 2.41
414 415 6.148150 CGGTGAGCTTTAAAATACCACTTGTA 59.852 38.462 0.00 0.00 0.00 2.41
415 416 5.048991 CGGTGAGCTTTAAAATACCACTTGT 60.049 40.000 0.00 0.00 0.00 3.16
416 417 5.048991 ACGGTGAGCTTTAAAATACCACTTG 60.049 40.000 0.00 0.00 0.00 3.16
417 418 5.067954 ACGGTGAGCTTTAAAATACCACTT 58.932 37.500 0.00 0.00 0.00 3.16
418 419 4.648651 ACGGTGAGCTTTAAAATACCACT 58.351 39.130 0.00 0.00 0.00 4.00
419 420 6.673154 ATACGGTGAGCTTTAAAATACCAC 57.327 37.500 0.00 0.00 0.00 4.16
420 421 8.042515 ACTTATACGGTGAGCTTTAAAATACCA 58.957 33.333 0.00 0.00 0.00 3.25
421 422 8.429493 ACTTATACGGTGAGCTTTAAAATACC 57.571 34.615 0.00 0.00 0.00 2.73
422 423 9.698617 CAACTTATACGGTGAGCTTTAAAATAC 57.301 33.333 0.00 0.00 0.00 1.89
423 424 9.439500 ACAACTTATACGGTGAGCTTTAAAATA 57.561 29.630 0.56 0.00 0.00 1.40
424 425 8.331730 ACAACTTATACGGTGAGCTTTAAAAT 57.668 30.769 0.56 0.00 0.00 1.82
425 426 7.733402 ACAACTTATACGGTGAGCTTTAAAA 57.267 32.000 0.56 0.00 0.00 1.52
426 427 9.439500 AATACAACTTATACGGTGAGCTTTAAA 57.561 29.630 0.56 0.00 0.00 1.52
427 428 9.439500 AAATACAACTTATACGGTGAGCTTTAA 57.561 29.630 0.56 0.00 0.00 1.52
428 429 9.439500 AAAATACAACTTATACGGTGAGCTTTA 57.561 29.630 0.56 0.00 0.00 1.85
429 430 7.916914 AAATACAACTTATACGGTGAGCTTT 57.083 32.000 0.56 0.00 0.00 3.51
430 431 7.389607 ACAAAATACAACTTATACGGTGAGCTT 59.610 33.333 0.56 0.00 0.00 3.74
431 432 6.877322 ACAAAATACAACTTATACGGTGAGCT 59.123 34.615 0.56 0.00 0.00 4.09
432 433 7.068692 ACAAAATACAACTTATACGGTGAGC 57.931 36.000 0.56 0.00 0.00 4.26
495 496 6.062749 ACAGACTTCCCCTAAGAAAGAAAAC 58.937 40.000 0.00 0.00 38.67 2.43
504 505 1.351017 TGCCAACAGACTTCCCCTAAG 59.649 52.381 0.00 0.00 41.33 2.18
515 516 7.170658 GCACAAATTAAATAAAGTGCCAACAGA 59.829 33.333 0.00 0.00 44.68 3.41
616 618 8.713271 GCACATTTTCTAGCTAGGAATACATAC 58.287 37.037 20.58 3.61 0.00 2.39
662 665 4.406943 GAAGATTGAATTTCAGCACCGTC 58.593 43.478 0.00 0.00 0.00 4.79
665 668 3.191371 ACCGAAGATTGAATTTCAGCACC 59.809 43.478 0.00 0.00 0.00 5.01
676 679 3.319405 GCTCCAGAGATACCGAAGATTGA 59.681 47.826 0.00 0.00 0.00 2.57
685 688 4.679373 TCAATCTTGCTCCAGAGATACC 57.321 45.455 0.00 0.00 32.52 2.73
693 696 3.817084 CTGACTGTTTCAATCTTGCTCCA 59.183 43.478 0.00 0.00 32.21 3.86
694 697 3.365767 GCTGACTGTTTCAATCTTGCTCC 60.366 47.826 0.00 0.00 32.21 4.70
727 730 7.430760 AAGATAGATATTCTGGGACCTATGC 57.569 40.000 0.00 0.00 0.00 3.14
754 757 5.450137 GGAGTACTAGTCGAAGCTTGCAATA 60.450 44.000 2.10 0.00 0.00 1.90
770 773 5.549742 TTTTTGGAACGGAAGGAGTACTA 57.450 39.130 0.00 0.00 0.00 1.82
774 777 5.240844 CACTTATTTTTGGAACGGAAGGAGT 59.759 40.000 0.00 0.00 0.00 3.85
776 779 5.134661 ACACTTATTTTTGGAACGGAAGGA 58.865 37.500 0.00 0.00 0.00 3.36
777 780 5.009210 TGACACTTATTTTTGGAACGGAAGG 59.991 40.000 0.00 0.00 0.00 3.46
778 781 5.912955 GTGACACTTATTTTTGGAACGGAAG 59.087 40.000 0.00 0.00 0.00 3.46
779 782 5.357314 TGTGACACTTATTTTTGGAACGGAA 59.643 36.000 7.20 0.00 0.00 4.30
780 783 4.882427 TGTGACACTTATTTTTGGAACGGA 59.118 37.500 7.20 0.00 0.00 4.69
781 784 5.176407 TGTGACACTTATTTTTGGAACGG 57.824 39.130 7.20 0.00 0.00 4.44
782 785 6.262601 AGTTGTGACACTTATTTTTGGAACG 58.737 36.000 7.20 0.00 0.00 3.95
783 786 8.474006 AAAGTTGTGACACTTATTTTTGGAAC 57.526 30.769 7.20 0.00 35.87 3.62
814 2188 9.511272 AGTATAAAGTCGTCCCAAAAATAAGTT 57.489 29.630 0.00 0.00 0.00 2.66
820 2194 8.907222 AAGTTAGTATAAAGTCGTCCCAAAAA 57.093 30.769 0.00 0.00 0.00 1.94
834 2208 9.956640 TTCCGTCCCAAAAATAAGTTAGTATAA 57.043 29.630 0.00 0.00 0.00 0.98
836 2210 8.105197 ACTTCCGTCCCAAAAATAAGTTAGTAT 58.895 33.333 0.00 0.00 0.00 2.12
837 2211 7.452562 ACTTCCGTCCCAAAAATAAGTTAGTA 58.547 34.615 0.00 0.00 0.00 1.82
838 2212 6.301486 ACTTCCGTCCCAAAAATAAGTTAGT 58.699 36.000 0.00 0.00 0.00 2.24
839 2213 6.812879 ACTTCCGTCCCAAAAATAAGTTAG 57.187 37.500 0.00 0.00 0.00 2.34
840 2214 7.938490 ACTAACTTCCGTCCCAAAAATAAGTTA 59.062 33.333 0.00 0.00 37.07 2.24
841 2215 6.774170 ACTAACTTCCGTCCCAAAAATAAGTT 59.226 34.615 0.00 0.00 38.71 2.66
843 2217 6.812879 ACTAACTTCCGTCCCAAAAATAAG 57.187 37.500 0.00 0.00 0.00 1.73
844 2218 9.956640 TTATACTAACTTCCGTCCCAAAAATAA 57.043 29.630 0.00 0.00 0.00 1.40
845 2219 9.956640 TTTATACTAACTTCCGTCCCAAAAATA 57.043 29.630 0.00 0.00 0.00 1.40
846 2220 8.866970 TTTATACTAACTTCCGTCCCAAAAAT 57.133 30.769 0.00 0.00 0.00 1.82
847 2221 7.938490 ACTTTATACTAACTTCCGTCCCAAAAA 59.062 33.333 0.00 0.00 0.00 1.94
850 2224 6.610075 ACTTTATACTAACTTCCGTCCCAA 57.390 37.500 0.00 0.00 0.00 4.12
851 2225 6.610075 AACTTTATACTAACTTCCGTCCCA 57.390 37.500 0.00 0.00 0.00 4.37
852 2226 7.821359 AGAAAACTTTATACTAACTTCCGTCCC 59.179 37.037 0.00 0.00 0.00 4.46
853 2227 8.768957 AGAAAACTTTATACTAACTTCCGTCC 57.231 34.615 0.00 0.00 0.00 4.79
854 2228 9.636879 AGAGAAAACTTTATACTAACTTCCGTC 57.363 33.333 0.00 0.00 0.00 4.79
855 2229 9.636879 GAGAGAAAACTTTATACTAACTTCCGT 57.363 33.333 0.00 0.00 0.00 4.69
856 2230 9.857957 AGAGAGAAAACTTTATACTAACTTCCG 57.142 33.333 0.00 0.00 0.00 4.30
891 3192 7.225734 CCCACGAAGGTTTTAAAATTTGTGAAT 59.774 33.333 24.07 2.60 34.66 2.57
899 3200 4.342665 TGAAGCCCACGAAGGTTTTAAAAT 59.657 37.500 3.52 0.00 34.66 1.82
952 3254 0.106894 CTGGATAACGGGAAGAGGGC 59.893 60.000 0.00 0.00 0.00 5.19
961 3263 0.824109 TCTGCTGGACTGGATAACGG 59.176 55.000 0.00 0.00 0.00 4.44
1059 3391 3.299190 CGGAGGAGGATCTCGGGC 61.299 72.222 0.00 0.00 34.74 6.13
1248 3584 3.089874 CGATTGGGGGCCTCCAGA 61.090 66.667 27.06 16.74 38.17 3.86
1282 3618 2.733552 CAGCGTCGATGGGAAATGATAG 59.266 50.000 6.79 0.00 0.00 2.08
1284 3620 1.134401 ACAGCGTCGATGGGAAATGAT 60.134 47.619 15.82 0.00 0.00 2.45
1423 3768 0.534203 TCCTCGTTGTCAAACCCTGC 60.534 55.000 0.00 0.00 32.23 4.85
1437 3782 1.137872 CCTTTGATCCTGGTCTCCTCG 59.862 57.143 0.00 0.00 0.00 4.63
1571 3919 0.926155 CGACACGAGATTGCTCCATG 59.074 55.000 0.00 0.00 37.91 3.66
1602 3950 2.101582 GACTACATCAGGATTGTCGGCT 59.898 50.000 0.00 0.00 0.00 5.52
1720 4083 2.496070 TCACACTAAGGCTCTGCGTATT 59.504 45.455 0.00 0.00 0.00 1.89
1878 4251 2.757099 CCCAGCACCCATGAAGCC 60.757 66.667 0.00 0.00 0.00 4.35
1936 4309 2.730524 GGCTCTGACTGCCCTCCTC 61.731 68.421 0.00 0.00 44.32 3.71
1937 4310 2.686835 GGCTCTGACTGCCCTCCT 60.687 66.667 0.00 0.00 44.32 3.69
2287 4792 7.553402 AGGAGGCACTAACTAGATATATACACG 59.447 40.741 0.00 0.00 41.55 4.49
2310 4815 5.131475 ACAAACAGGTAAACAGGTAAGAGGA 59.869 40.000 0.00 0.00 0.00 3.71
2315 4820 5.507637 TCCAACAAACAGGTAAACAGGTAA 58.492 37.500 0.00 0.00 0.00 2.85
2321 4826 6.385649 TGAGATTCCAACAAACAGGTAAAC 57.614 37.500 0.00 0.00 0.00 2.01
2326 4831 4.281688 ACCAATGAGATTCCAACAAACAGG 59.718 41.667 0.00 0.00 0.00 4.00
2365 4870 0.179094 TTATGCCCGCGTCTACAAGG 60.179 55.000 4.92 0.00 0.00 3.61
2484 5031 4.023707 CAGCAAAAACAAAAACAACCACCA 60.024 37.500 0.00 0.00 0.00 4.17
2514 5074 4.799419 ACAAAACAACTGAATGCAATGC 57.201 36.364 0.00 0.00 0.00 3.56
2605 5166 6.070309 TGCTGGGGCATTTTAGTTATCAAATT 60.070 34.615 0.00 0.00 44.28 1.82
2681 5244 5.240844 TCATAGCAATCCTGAATGAGCAATG 59.759 40.000 0.00 0.00 0.00 2.82
2698 5261 3.261643 AGCGATCATTGGGTATCATAGCA 59.738 43.478 0.00 0.00 0.00 3.49
2739 5303 5.527582 ACCAAACCGCTTAAGATTAGCATAG 59.472 40.000 6.67 0.00 38.55 2.23
2777 5341 8.903820 AGTTAAATTCACAAATAGAGGTATGCC 58.096 33.333 0.00 0.00 0.00 4.40
2887 6895 2.839486 TTCGAACAGAGTGCCAGAAT 57.161 45.000 0.00 0.00 0.00 2.40
2889 6897 1.344438 ACATTCGAACAGAGTGCCAGA 59.656 47.619 0.00 0.00 39.86 3.86
2965 6977 0.528470 AACCACACCAACAACCAACG 59.472 50.000 0.00 0.00 0.00 4.10
2971 6983 1.203523 GCACAGAAACCACACCAACAA 59.796 47.619 0.00 0.00 0.00 2.83
3014 7026 7.385267 TCAGAAAATGTTAAACATCCCAATGG 58.615 34.615 0.00 0.00 37.97 3.16
3030 7043 4.786507 TCATGCGTTCAGTTCAGAAAATG 58.213 39.130 0.00 0.00 0.00 2.32
3036 7049 7.007725 GTCAATTTTATCATGCGTTCAGTTCAG 59.992 37.037 0.00 0.00 0.00 3.02
3075 7088 8.845227 TGTTAGCATATTCTCAAGTTTTTGACA 58.155 29.630 0.00 0.00 38.37 3.58
3109 7122 2.119484 TTGTAGGGGCACACCTTCGG 62.119 60.000 0.00 0.00 42.09 4.30
3110 7123 0.250553 TTTGTAGGGGCACACCTTCG 60.251 55.000 0.00 0.00 42.09 3.79
3122 7135 9.113838 ACAATAGCAGATCAACTAATTTGTAGG 57.886 33.333 10.14 0.00 36.49 3.18
3133 7146 7.138692 AGAGAAACAACAATAGCAGATCAAC 57.861 36.000 0.00 0.00 0.00 3.18
3184 7198 9.883142 AAAAGGTTAAAATTGAATCAACACAGA 57.117 25.926 0.00 0.00 0.00 3.41
3188 7202 7.254590 CGCCAAAAGGTTAAAATTGAATCAACA 60.255 33.333 0.00 0.00 0.00 3.33
3198 7212 7.217906 TGGAAATTACGCCAAAAGGTTAAAAT 58.782 30.769 0.00 0.00 0.00 1.82
3203 7217 3.639561 ACTGGAAATTACGCCAAAAGGTT 59.360 39.130 0.00 0.00 32.95 3.50
3205 7219 3.934457 ACTGGAAATTACGCCAAAAGG 57.066 42.857 0.00 0.00 32.95 3.11
3215 7229 7.497249 CCAACATTTGTGGAAAACTGGAAATTA 59.503 33.333 0.00 0.00 0.00 1.40
3229 7243 6.219473 TGTAAACATTAGCCAACATTTGTGG 58.781 36.000 0.00 0.00 0.00 4.17
3230 7244 6.922957 ACTGTAAACATTAGCCAACATTTGTG 59.077 34.615 0.00 0.00 0.00 3.33
3231 7245 7.049799 ACTGTAAACATTAGCCAACATTTGT 57.950 32.000 0.00 0.00 0.00 2.83
3232 7246 7.945033 AACTGTAAACATTAGCCAACATTTG 57.055 32.000 0.00 0.00 0.00 2.32
3234 7248 7.721402 TCAAACTGTAAACATTAGCCAACATT 58.279 30.769 0.00 0.00 0.00 2.71
3235 7249 7.283625 TCAAACTGTAAACATTAGCCAACAT 57.716 32.000 0.00 0.00 0.00 2.71
3236 7250 6.701145 TCAAACTGTAAACATTAGCCAACA 57.299 33.333 0.00 0.00 0.00 3.33
3237 7251 7.865385 TGATTCAAACTGTAAACATTAGCCAAC 59.135 33.333 0.00 0.00 0.00 3.77
3238 7252 7.946207 TGATTCAAACTGTAAACATTAGCCAA 58.054 30.769 0.00 0.00 0.00 4.52
3239 7253 7.517614 TGATTCAAACTGTAAACATTAGCCA 57.482 32.000 0.00 0.00 0.00 4.75
3240 7254 8.699749 GTTTGATTCAAACTGTAAACATTAGCC 58.300 33.333 27.30 3.13 46.84 3.93
3322 7337 0.609151 CAACCAATGCCATCAGCCAA 59.391 50.000 0.00 0.00 42.71 4.52
3358 7373 5.304686 TCCCAGACAACAGAAATGTAACT 57.695 39.130 0.00 0.00 0.00 2.24
3359 7374 5.619981 GCATCCCAGACAACAGAAATGTAAC 60.620 44.000 0.00 0.00 0.00 2.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.