Multiple sequence alignment - TraesCS6B01G074300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G074300 chr6B 100.000 6780 0 0 1712 8491 51024158 51030937 0.000000e+00 12521.0
1 TraesCS6B01G074300 chr6B 100.000 1235 0 0 1 1235 51022447 51023681 0.000000e+00 2281.0
2 TraesCS6B01G074300 chr6B 83.660 153 15 8 2031 2174 51024331 51024482 1.490000e-27 135.0
3 TraesCS6B01G074300 chr6B 83.660 153 15 8 1885 2036 51024477 51024620 1.490000e-27 135.0
4 TraesCS6B01G074300 chr6A 92.779 4376 197 46 3679 7999 30726243 30721932 0.000000e+00 6220.0
5 TraesCS6B01G074300 chr6A 96.760 463 14 1 3125 3586 30726714 30726252 0.000000e+00 771.0
6 TraesCS6B01G074300 chr6A 88.845 511 32 7 740 1235 30728844 30728344 9.430000e-169 604.0
7 TraesCS6B01G074300 chr6A 83.544 474 50 16 2363 2812 30727748 30727279 1.320000e-112 418.0
8 TraesCS6B01G074300 chr6A 89.764 254 20 2 1722 1971 30728222 30727971 3.820000e-83 320.0
9 TraesCS6B01G074300 chr6A 81.075 428 56 13 8078 8488 30721811 30721392 1.380000e-82 318.0
10 TraesCS6B01G074300 chr6A 85.567 97 14 0 2219 2315 536253968 536253872 1.510000e-17 102.0
11 TraesCS6B01G074300 chr6D 93.674 3557 153 31 2725 6240 27494648 27498173 0.000000e+00 5256.0
12 TraesCS6B01G074300 chr6D 91.607 1680 84 27 6352 7999 27498265 27499919 0.000000e+00 2268.0
13 TraesCS6B01G074300 chr6D 87.387 555 48 6 2183 2723 27493915 27494461 1.210000e-172 617.0
14 TraesCS6B01G074300 chr6D 89.877 405 22 9 839 1235 27493091 27493484 3.540000e-138 503.0
15 TraesCS6B01G074300 chr6D 82.671 554 35 17 7997 8491 27499961 27500512 1.310000e-117 435.0
16 TraesCS6B01G074300 chr6D 82.418 455 50 15 37 462 27483706 27484159 3.740000e-98 370.0
17 TraesCS6B01G074300 chr6D 92.188 256 19 1 1732 1987 27493625 27493879 2.250000e-95 361.0
18 TraesCS6B01G074300 chr6D 88.136 118 10 3 488 605 27484224 27484337 4.130000e-28 137.0
19 TraesCS6B01G074300 chr6D 80.423 189 16 11 634 813 27484331 27484507 3.220000e-24 124.0
20 TraesCS6B01G074300 chr6D 88.636 88 9 1 2240 2327 315969630 315969544 1.170000e-18 106.0
21 TraesCS6B01G074300 chr6D 84.091 88 6 3 8351 8430 27500421 27500334 2.540000e-10 78.7
22 TraesCS6B01G074300 chr1B 89.499 2733 202 43 4391 7090 438179705 438182385 0.000000e+00 3378.0
23 TraesCS6B01G074300 chr1B 87.381 1260 103 31 3179 4391 438177879 438179129 0.000000e+00 1395.0
24 TraesCS6B01G074300 chr1B 84.096 918 83 32 7089 7998 438182639 438183501 0.000000e+00 828.0
25 TraesCS6B01G074300 chr1B 82.803 157 18 8 3038 3193 438177714 438177862 1.920000e-26 132.0
26 TraesCS6B01G074300 chr1B 82.022 89 16 0 57 145 650440394 650440482 9.140000e-10 76.8
27 TraesCS6B01G074300 chr1B 90.000 50 3 2 505 553 438175850 438175898 7.120000e-06 63.9
28 TraesCS6B01G074300 chr1D 89.211 2762 191 50 4391 7088 325670054 325672772 0.000000e+00 3350.0
29 TraesCS6B01G074300 chr1D 83.299 1455 132 52 3010 4391 325668040 325669456 0.000000e+00 1238.0
30 TraesCS6B01G074300 chr1D 85.845 876 70 26 7089 7951 325673037 325673871 0.000000e+00 881.0
31 TraesCS6B01G074300 chr1D 96.875 32 0 1 504 534 325666275 325666306 1.500000e-02 52.8
32 TraesCS6B01G074300 chr1A 88.962 2745 211 44 4391 7089 418053786 418051088 0.000000e+00 3306.0
33 TraesCS6B01G074300 chr1A 87.212 1259 107 29 3179 4391 418055637 418054387 0.000000e+00 1384.0
34 TraesCS6B01G074300 chr1A 86.560 878 72 25 7089 7948 418050824 418049975 0.000000e+00 926.0
35 TraesCS6B01G074300 chr1A 89.796 49 4 1 505 553 418057506 418057459 2.560000e-05 62.1
36 TraesCS6B01G074300 chr7B 81.191 739 124 11 4423 5154 561072231 561072961 1.590000e-161 580.0
37 TraesCS6B01G074300 chr7B 80.822 365 44 16 4032 4379 561066152 561066507 6.540000e-66 263.0
38 TraesCS6B01G074300 chr7B 100.000 30 0 0 1 30 499369342 499369313 1.000000e-03 56.5
39 TraesCS6B01G074300 chr7A 81.509 676 119 4 4482 5154 604815539 604816211 1.250000e-152 551.0
40 TraesCS6B01G074300 chr7A 83.989 356 45 8 4032 4379 604814409 604814760 1.770000e-86 331.0
41 TraesCS6B01G074300 chr7A 83.333 204 25 8 3925 4126 127657621 127657425 6.770000e-41 180.0
42 TraesCS6B01G074300 chr7A 94.444 36 2 0 119 154 109409992 109410027 1.000000e-03 56.5
43 TraesCS6B01G074300 chr7D 86.275 204 19 8 3925 4126 611354777 611354973 6.680000e-51 213.0
44 TraesCS6B01G074300 chr4B 80.319 188 13 13 3836 4004 141289776 141289958 4.160000e-23 121.0
45 TraesCS6B01G074300 chr4B 91.379 58 5 0 2255 2312 33632018 33632075 7.070000e-11 80.5
46 TraesCS6B01G074300 chr3A 87.209 86 10 1 2229 2314 455780040 455780124 7.020000e-16 97.1
47 TraesCS6B01G074300 chr2D 88.406 69 8 0 2259 2327 453696236 453696168 5.460000e-12 84.2
48 TraesCS6B01G074300 chr2D 91.111 45 4 0 2218 2262 73292274 73292230 2.560000e-05 62.1
49 TraesCS6B01G074300 chr5B 74.236 229 38 16 57 266 522941113 522940887 9.140000e-10 76.8
50 TraesCS6B01G074300 chr2B 79.775 89 18 0 57 145 16861781 16861869 1.980000e-06 65.8
51 TraesCS6B01G074300 chr3B 100.000 34 0 0 112 145 785961123 785961090 7.120000e-06 63.9
52 TraesCS6B01G074300 chr3B 91.111 45 4 0 415 459 2095293 2095249 2.560000e-05 62.1
53 TraesCS6B01G074300 chr4D 82.090 67 11 1 97 163 477365493 477365428 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G074300 chr6B 51022447 51030937 8490 False 7401.000000 12521 100.000000 1 8491 2 chr6B.!!$F1 8490
1 TraesCS6B01G074300 chr6A 30721392 30728844 7452 True 1441.833333 6220 88.794500 740 8488 6 chr6A.!!$R2 7748
2 TraesCS6B01G074300 chr6D 27493091 27500512 7421 False 1573.333333 5256 89.567333 839 8491 6 chr6D.!!$F2 7652
3 TraesCS6B01G074300 chr6D 27483706 27484507 801 False 210.333333 370 83.659000 37 813 3 chr6D.!!$F1 776
4 TraesCS6B01G074300 chr1B 438175850 438183501 7651 False 1159.380000 3378 86.755800 505 7998 5 chr1B.!!$F2 7493
5 TraesCS6B01G074300 chr1D 325666275 325673871 7596 False 1380.450000 3350 88.807500 504 7951 4 chr1D.!!$F1 7447
6 TraesCS6B01G074300 chr1A 418049975 418057506 7531 True 1419.525000 3306 88.132500 505 7948 4 chr1A.!!$R1 7443
7 TraesCS6B01G074300 chr7B 561072231 561072961 730 False 580.000000 580 81.191000 4423 5154 1 chr7B.!!$F2 731
8 TraesCS6B01G074300 chr7A 604814409 604816211 1802 False 441.000000 551 82.749000 4032 5154 2 chr7A.!!$F2 1122

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
304 329 0.041839 GCGGCGTCAATCTTGCATAG 60.042 55.0 9.37 0.0 0.00 2.23 F
736 816 0.110104 ATGGATAGAGCAGGGCAAGC 59.890 55.0 0.00 0.0 0.00 4.01 F
1938 2133 0.179018 GTGCCTCCCTTTGCGGATAT 60.179 55.0 0.00 0.0 33.16 1.63 F
2014 2209 0.033366 AGCGGGTTTTGTGAAATGCC 59.967 50.0 0.00 0.0 0.00 4.40 F
2083 2278 0.308993 GCCTCACATTGCGCCTATTC 59.691 55.0 4.18 0.0 0.00 1.75 F
2450 2734 0.390340 GAGCCAACTCAGATGTGCGA 60.390 55.0 0.00 0.0 42.93 5.10 F
2674 2984 0.471211 TGGACCGGTCTCTGGAAACT 60.471 55.0 32.52 0.0 0.00 2.66 F
3121 4088 0.976641 TGCTCGGATCTGTTCCAGTT 59.023 50.0 0.42 0.0 45.78 3.16 F
4749 6613 0.316204 CTTTGCACCCCTTTGCTCTG 59.684 55.0 0.00 0.0 43.41 3.35 F
5791 7680 0.937304 CAAATGGCGACCCTCGTATG 59.063 55.0 0.00 0.0 42.81 2.39 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1995 2190 0.033366 GGCATTTCACAAAACCCGCT 59.967 50.000 0.00 0.00 0.00 5.52 R
2013 2208 0.527817 AATTTAGAGACGAGCGCCGG 60.528 55.000 19.73 0.00 43.93 6.13 R
2791 3294 0.457443 TAGTGCTCCATCGTCTGCAG 59.543 55.000 7.63 7.63 36.03 4.41 R
3563 4602 0.896923 TTTCGGCGCTAGAAAGGGTA 59.103 50.000 21.30 5.72 37.95 3.69 R
4035 5119 3.377485 TGACAGTTATAGCTGAGGACGAC 59.623 47.826 21.85 5.98 39.62 4.34 R
4280 5374 5.517924 TGAATCTATCATGAGCCCCAAAAA 58.482 37.500 0.09 0.00 31.50 1.94 R
4565 6419 4.343239 AGAAAATCTTGCTGAGCCAAGTTT 59.657 37.500 0.23 4.79 42.16 2.66 R
5092 6958 2.936498 CAGTGTTATAGGCCTCCAAACG 59.064 50.000 9.68 0.00 0.00 3.60 R
6613 8548 0.960861 GGTGCCCTCAGCTGGTAAAC 60.961 60.000 15.13 6.41 44.23 2.01 R
7667 9925 0.030101 TAGTGTTTGTTTGCAGCGGC 59.970 50.000 0.31 0.31 41.68 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.872584 CGATAACGATAAACGATATCCTCAAC 58.127 38.462 11.60 0.00 46.52 3.18
26 27 7.536281 CGATAACGATAAACGATATCCTCAACA 59.464 37.037 11.60 0.00 46.52 3.33
27 28 9.355215 GATAACGATAAACGATATCCTCAACAT 57.645 33.333 0.00 0.00 44.88 2.71
28 29 9.706691 ATAACGATAAACGATATCCTCAACATT 57.293 29.630 0.00 0.00 45.77 2.71
29 30 7.408132 ACGATAAACGATATCCTCAACATTG 57.592 36.000 0.00 0.00 45.77 2.82
30 31 7.207383 ACGATAAACGATATCCTCAACATTGA 58.793 34.615 0.00 0.00 45.77 2.57
31 32 7.872993 ACGATAAACGATATCCTCAACATTGAT 59.127 33.333 0.00 0.00 45.77 2.57
32 33 8.712363 CGATAAACGATATCCTCAACATTGATT 58.288 33.333 0.00 0.00 45.77 2.57
33 34 9.817365 GATAAACGATATCCTCAACATTGATTG 57.183 33.333 0.00 0.00 36.46 2.67
34 35 7.864108 AAACGATATCCTCAACATTGATTGA 57.136 32.000 0.00 0.00 36.46 2.57
48 49 9.371136 CAACATTGATTGAGAGTACTAAGCTTA 57.629 33.333 5.94 5.94 0.00 3.09
63 64 7.954666 ACTAAGCTTATAAATTTGGGCTTCA 57.045 32.000 17.99 9.40 40.00 3.02
81 82 4.522022 GCTTCATATTTAGAGCTGGGCATT 59.478 41.667 0.00 0.00 0.00 3.56
115 124 2.047655 GGATGGCGACGGTGTTGA 60.048 61.111 0.00 0.00 0.00 3.18
128 137 1.001597 GGTGTTGACGTCGAGACTTCT 60.002 52.381 26.87 0.00 31.67 2.85
130 139 1.674441 TGTTGACGTCGAGACTTCTGT 59.326 47.619 11.62 0.00 31.67 3.41
132 141 0.591659 TGACGTCGAGACTTCTGTGG 59.408 55.000 11.62 0.00 31.67 4.17
141 150 1.344438 AGACTTCTGTGGCAACGATGA 59.656 47.619 0.00 0.00 42.51 2.92
145 154 0.324614 TCTGTGGCAACGATGATGGT 59.675 50.000 0.00 0.00 42.51 3.55
152 161 0.846401 CAACGATGATGGTACGAGCG 59.154 55.000 0.00 0.00 0.00 5.03
157 166 2.320367 GATGATGGTACGAGCGATGAC 58.680 52.381 0.00 0.00 0.00 3.06
164 189 0.733150 TACGAGCGATGACTGAGGTG 59.267 55.000 0.00 0.00 0.00 4.00
167 192 0.247736 GAGCGATGACTGAGGTGGTT 59.752 55.000 0.00 0.00 0.00 3.67
178 203 0.980423 GAGGTGGTTGGCTCTTCTCT 59.020 55.000 0.00 0.00 0.00 3.10
179 204 2.180276 GAGGTGGTTGGCTCTTCTCTA 58.820 52.381 0.00 0.00 0.00 2.43
186 211 3.391049 GTTGGCTCTTCTCTAACGTGTT 58.609 45.455 0.00 0.00 0.00 3.32
200 225 2.088950 CGTGTTCGTGGGATTACCTT 57.911 50.000 0.00 0.00 41.11 3.50
202 227 2.610976 CGTGTTCGTGGGATTACCTTGA 60.611 50.000 0.00 0.00 41.11 3.02
203 228 3.606687 GTGTTCGTGGGATTACCTTGAT 58.393 45.455 0.00 0.00 41.11 2.57
204 229 4.007659 GTGTTCGTGGGATTACCTTGATT 58.992 43.478 0.00 0.00 41.11 2.57
206 231 5.048294 GTGTTCGTGGGATTACCTTGATTTT 60.048 40.000 0.00 0.00 41.11 1.82
207 232 5.536916 TGTTCGTGGGATTACCTTGATTTTT 59.463 36.000 0.00 0.00 41.11 1.94
230 255 1.123077 TGCTGTGGTGAAGTCAGAGT 58.877 50.000 0.00 0.00 0.00 3.24
236 261 1.837439 TGGTGAAGTCAGAGTTGTGGT 59.163 47.619 0.00 0.00 0.00 4.16
285 310 3.081804 GGGTATGTTTGGTGACCTTCAG 58.918 50.000 2.11 0.00 32.24 3.02
291 316 4.681978 GGTGACCTTCAGCGGCGT 62.682 66.667 9.37 0.00 35.04 5.68
304 329 0.041839 GCGGCGTCAATCTTGCATAG 60.042 55.000 9.37 0.00 0.00 2.23
305 330 1.290203 CGGCGTCAATCTTGCATAGT 58.710 50.000 0.00 0.00 0.00 2.12
310 335 4.142600 GGCGTCAATCTTGCATAGTTTCTT 60.143 41.667 0.00 0.00 0.00 2.52
312 337 5.251081 CGTCAATCTTGCATAGTTTCTTCG 58.749 41.667 0.00 0.00 0.00 3.79
316 341 8.391106 GTCAATCTTGCATAGTTTCTTCGTTAT 58.609 33.333 0.00 0.00 0.00 1.89
327 352 7.611213 AGTTTCTTCGTTATTACATTCAGGG 57.389 36.000 0.00 0.00 0.00 4.45
328 353 6.093633 AGTTTCTTCGTTATTACATTCAGGGC 59.906 38.462 0.00 0.00 0.00 5.19
367 397 6.652062 ACGTAGGATTTTCAGTATTTTTCGGT 59.348 34.615 0.00 0.00 0.00 4.69
398 428 1.398451 GCACGAATCACAACGGAACAG 60.398 52.381 0.00 0.00 0.00 3.16
426 456 0.694771 AGAAGGATTGAGCAGGTGCA 59.305 50.000 4.48 0.00 45.16 4.57
430 460 1.436336 GATTGAGCAGGTGCATGGC 59.564 57.895 4.48 0.00 45.16 4.40
431 461 2.012902 GATTGAGCAGGTGCATGGCC 62.013 60.000 4.48 0.00 45.16 5.36
462 492 2.684001 TGCCCGTATGAATTTCTCGT 57.316 45.000 0.00 0.00 0.00 4.18
464 494 2.675844 TGCCCGTATGAATTTCTCGTTG 59.324 45.455 0.00 0.00 0.00 4.10
466 496 3.560068 GCCCGTATGAATTTCTCGTTGAT 59.440 43.478 0.00 0.00 0.00 2.57
467 497 4.318831 GCCCGTATGAATTTCTCGTTGATC 60.319 45.833 0.00 0.00 0.00 2.92
468 498 4.085055 CCCGTATGAATTTCTCGTTGATCG 60.085 45.833 0.00 0.00 41.41 3.69
469 499 4.085055 CCGTATGAATTTCTCGTTGATCGG 60.085 45.833 0.00 0.00 40.32 4.18
470 500 4.503007 CGTATGAATTTCTCGTTGATCGGT 59.497 41.667 0.00 0.00 40.32 4.69
472 502 2.921121 TGAATTTCTCGTTGATCGGTCG 59.079 45.455 0.00 0.00 40.32 4.79
473 503 1.922570 ATTTCTCGTTGATCGGTCGG 58.077 50.000 0.00 0.00 40.32 4.79
476 506 1.452110 TCTCGTTGATCGGTCGGTAA 58.548 50.000 0.00 0.00 40.32 2.85
478 508 0.179156 TCGTTGATCGGTCGGTAAGC 60.179 55.000 0.00 0.00 40.32 3.09
479 509 0.179145 CGTTGATCGGTCGGTAAGCT 60.179 55.000 0.00 0.00 35.71 3.74
480 510 1.064505 CGTTGATCGGTCGGTAAGCTA 59.935 52.381 0.00 0.00 35.71 3.32
481 511 2.287427 CGTTGATCGGTCGGTAAGCTAT 60.287 50.000 0.00 0.00 35.71 2.97
482 512 3.306818 GTTGATCGGTCGGTAAGCTATC 58.693 50.000 0.00 0.00 0.00 2.08
484 514 2.812591 TGATCGGTCGGTAAGCTATCTC 59.187 50.000 0.00 0.00 30.92 2.75
485 515 2.634815 TCGGTCGGTAAGCTATCTCT 57.365 50.000 0.00 0.00 0.00 3.10
486 516 2.492012 TCGGTCGGTAAGCTATCTCTC 58.508 52.381 0.00 0.00 0.00 3.20
499 568 0.532573 ATCTCTCAACCGCGTGTGAT 59.467 50.000 4.92 1.67 0.00 3.06
502 571 0.388520 TCTCAACCGCGTGTGATGAG 60.389 55.000 16.69 16.69 39.04 2.90
503 572 1.354337 CTCAACCGCGTGTGATGAGG 61.354 60.000 4.92 0.00 35.11 3.86
540 609 3.926616 TCAGATTTGGTTCTCGGTCTTC 58.073 45.455 0.00 0.00 0.00 2.87
541 610 3.003480 CAGATTTGGTTCTCGGTCTTCC 58.997 50.000 0.00 0.00 0.00 3.46
549 619 3.296709 CTCGGTCTTCCCCCGTGTG 62.297 68.421 0.00 0.00 45.63 3.82
576 646 1.509923 GAGGAGGAACCCGTGTACG 59.490 63.158 0.00 0.00 40.05 3.67
577 647 0.962356 GAGGAGGAACCCGTGTACGA 60.962 60.000 5.91 0.00 40.05 3.43
607 677 5.718649 ATGCATCCGCGTGAATAATATAC 57.281 39.130 4.92 0.00 42.97 1.47
608 678 4.816392 TGCATCCGCGTGAATAATATACT 58.184 39.130 4.92 0.00 42.97 2.12
610 680 4.032900 GCATCCGCGTGAATAATATACTGG 59.967 45.833 4.92 0.00 0.00 4.00
611 681 4.859304 TCCGCGTGAATAATATACTGGT 57.141 40.909 4.92 0.00 0.00 4.00
612 682 5.204409 TCCGCGTGAATAATATACTGGTT 57.796 39.130 4.92 0.00 0.00 3.67
613 683 5.603596 TCCGCGTGAATAATATACTGGTTT 58.396 37.500 4.92 0.00 0.00 3.27
614 684 6.050432 TCCGCGTGAATAATATACTGGTTTT 58.950 36.000 4.92 0.00 0.00 2.43
615 685 6.539464 TCCGCGTGAATAATATACTGGTTTTT 59.461 34.615 4.92 0.00 0.00 1.94
646 716 9.670442 TTGAGGGAAGAATAATATACTGGTAGT 57.330 33.333 0.00 0.00 0.00 2.73
688 767 2.338809 TCCTTCTGAGAAAAGCCCAGA 58.661 47.619 0.00 0.00 35.38 3.86
691 770 3.254411 CCTTCTGAGAAAAGCCCAGAAAC 59.746 47.826 0.00 0.00 43.65 2.78
692 771 3.864789 TCTGAGAAAAGCCCAGAAACT 57.135 42.857 0.00 0.00 34.38 2.66
693 772 3.744660 TCTGAGAAAAGCCCAGAAACTC 58.255 45.455 0.00 0.00 34.38 3.01
694 773 3.136443 TCTGAGAAAAGCCCAGAAACTCA 59.864 43.478 0.00 0.00 34.38 3.41
697 776 2.959030 AGAAAAGCCCAGAAACTCAACC 59.041 45.455 0.00 0.00 0.00 3.77
704 784 1.528129 CAGAAACTCAACCCCAGCTC 58.472 55.000 0.00 0.00 0.00 4.09
731 811 3.582998 TCCAAAATGGATAGAGCAGGG 57.417 47.619 0.00 0.00 42.67 4.45
732 812 1.959282 CCAAAATGGATAGAGCAGGGC 59.041 52.381 0.00 0.00 40.96 5.19
733 813 2.658285 CAAAATGGATAGAGCAGGGCA 58.342 47.619 0.00 0.00 0.00 5.36
734 814 3.025978 CAAAATGGATAGAGCAGGGCAA 58.974 45.455 0.00 0.00 0.00 4.52
735 815 2.653234 AATGGATAGAGCAGGGCAAG 57.347 50.000 0.00 0.00 0.00 4.01
736 816 0.110104 ATGGATAGAGCAGGGCAAGC 59.890 55.000 0.00 0.00 0.00 4.01
761 841 4.457496 CCATCTGACGCGTGGGCT 62.457 66.667 20.70 0.00 36.88 5.19
829 915 1.061566 GGTGTATAAACAACGCGGCTC 59.938 52.381 12.47 0.00 37.36 4.70
925 1029 4.995594 CAGGGGATTTCTGCCTCC 57.004 61.111 0.00 0.00 32.40 4.30
938 1054 0.967887 TGCCTCCCAACTCTCTCTCG 60.968 60.000 0.00 0.00 0.00 4.04
969 1085 3.767673 ACTCGTATTCAAACTAGAGGGCA 59.232 43.478 0.00 0.00 0.00 5.36
971 1087 3.132289 TCGTATTCAAACTAGAGGGCAGG 59.868 47.826 0.00 0.00 0.00 4.85
972 1088 3.118738 CGTATTCAAACTAGAGGGCAGGT 60.119 47.826 0.00 0.00 0.00 4.00
1173 1331 2.370445 CCCCCTCGAGGTGATGCTT 61.370 63.158 29.25 0.00 0.00 3.91
1192 1355 4.521062 CTTGCTCGCTCCCCTCCG 62.521 72.222 0.00 0.00 0.00 4.63
1854 2049 0.535553 GTTACCAACAACCTGCCGGA 60.536 55.000 5.05 0.00 0.00 5.14
1903 2098 4.030913 TCGATTCTGGTTTAGATCCCACT 58.969 43.478 0.00 0.00 34.80 4.00
1904 2099 4.469945 TCGATTCTGGTTTAGATCCCACTT 59.530 41.667 0.00 0.00 34.80 3.16
1906 2101 5.648092 CGATTCTGGTTTAGATCCCACTTTT 59.352 40.000 0.00 0.00 34.80 2.27
1907 2102 6.151144 CGATTCTGGTTTAGATCCCACTTTTT 59.849 38.462 0.00 0.00 34.80 1.94
1908 2103 7.335924 CGATTCTGGTTTAGATCCCACTTTTTA 59.664 37.037 0.00 0.00 34.80 1.52
1910 2105 8.950007 TTCTGGTTTAGATCCCACTTTTTAAT 57.050 30.769 0.00 0.00 34.80 1.40
1915 2110 8.691797 GGTTTAGATCCCACTTTTTAATATGCA 58.308 33.333 0.00 0.00 0.00 3.96
1920 2115 8.761689 AGATCCCACTTTTTAATATGCAAATGT 58.238 29.630 0.00 0.00 0.00 2.71
1921 2116 8.721019 ATCCCACTTTTTAATATGCAAATGTG 57.279 30.769 13.72 13.72 37.59 3.21
1931 2126 3.520187 GCAAATGTGCCTCCCTTTG 57.480 52.632 0.00 0.00 45.68 2.77
1932 2127 0.671472 GCAAATGTGCCTCCCTTTGC 60.671 55.000 0.00 3.45 45.68 3.68
1933 2128 0.388907 CAAATGTGCCTCCCTTTGCG 60.389 55.000 0.00 0.00 0.00 4.85
1934 2129 1.535204 AAATGTGCCTCCCTTTGCGG 61.535 55.000 0.00 0.00 0.00 5.69
1935 2130 2.424842 AATGTGCCTCCCTTTGCGGA 62.425 55.000 0.00 0.00 33.16 5.54
1936 2131 2.044946 GTGCCTCCCTTTGCGGAT 60.045 61.111 0.00 0.00 33.16 4.18
1937 2132 1.223487 GTGCCTCCCTTTGCGGATA 59.777 57.895 0.00 0.00 33.16 2.59
1938 2133 0.179018 GTGCCTCCCTTTGCGGATAT 60.179 55.000 0.00 0.00 33.16 1.63
1939 2134 0.550914 TGCCTCCCTTTGCGGATATT 59.449 50.000 0.00 0.00 33.16 1.28
1940 2135 1.064017 TGCCTCCCTTTGCGGATATTT 60.064 47.619 0.00 0.00 33.16 1.40
1941 2136 2.031870 GCCTCCCTTTGCGGATATTTT 58.968 47.619 0.00 0.00 33.16 1.82
1942 2137 2.430694 GCCTCCCTTTGCGGATATTTTT 59.569 45.455 0.00 0.00 33.16 1.94
1962 2157 3.791973 TTAATGCGTGCAATTTAGGGG 57.208 42.857 0.00 0.00 0.00 4.79
1963 2158 1.555967 AATGCGTGCAATTTAGGGGT 58.444 45.000 0.00 0.00 0.00 4.95
1964 2159 2.428544 ATGCGTGCAATTTAGGGGTA 57.571 45.000 0.00 0.00 0.00 3.69
1965 2160 2.428544 TGCGTGCAATTTAGGGGTAT 57.571 45.000 0.00 0.00 0.00 2.73
1966 2161 2.729194 TGCGTGCAATTTAGGGGTATT 58.271 42.857 0.00 0.00 0.00 1.89
1967 2162 3.093057 TGCGTGCAATTTAGGGGTATTT 58.907 40.909 0.00 0.00 0.00 1.40
1968 2163 3.511934 TGCGTGCAATTTAGGGGTATTTT 59.488 39.130 0.00 0.00 0.00 1.82
1969 2164 4.705507 TGCGTGCAATTTAGGGGTATTTTA 59.294 37.500 0.00 0.00 0.00 1.52
1970 2165 5.038683 GCGTGCAATTTAGGGGTATTTTAC 58.961 41.667 0.00 0.00 0.00 2.01
1983 2178 5.541098 GGTATTTTACCCGAGAGTTTGTG 57.459 43.478 0.00 0.00 43.18 3.33
1984 2179 4.999311 GGTATTTTACCCGAGAGTTTGTGT 59.001 41.667 0.00 0.00 43.18 3.72
1985 2180 5.471116 GGTATTTTACCCGAGAGTTTGTGTT 59.529 40.000 0.00 0.00 43.18 3.32
1986 2181 6.016860 GGTATTTTACCCGAGAGTTTGTGTTT 60.017 38.462 0.00 0.00 43.18 2.83
1987 2182 5.488645 TTTTACCCGAGAGTTTGTGTTTC 57.511 39.130 0.00 0.00 0.00 2.78
1988 2183 2.702592 ACCCGAGAGTTTGTGTTTCA 57.297 45.000 0.00 0.00 0.00 2.69
1989 2184 2.993937 ACCCGAGAGTTTGTGTTTCAA 58.006 42.857 0.00 0.00 0.00 2.69
1990 2185 3.551846 ACCCGAGAGTTTGTGTTTCAAT 58.448 40.909 0.00 0.00 35.84 2.57
1991 2186 3.951680 ACCCGAGAGTTTGTGTTTCAATT 59.048 39.130 0.00 0.00 35.84 2.32
1992 2187 4.401202 ACCCGAGAGTTTGTGTTTCAATTT 59.599 37.500 0.00 0.00 35.84 1.82
1993 2188 4.739716 CCCGAGAGTTTGTGTTTCAATTTG 59.260 41.667 0.00 0.00 35.84 2.32
1994 2189 5.449862 CCCGAGAGTTTGTGTTTCAATTTGA 60.450 40.000 0.00 0.00 35.84 2.69
1995 2190 6.033341 CCGAGAGTTTGTGTTTCAATTTGAA 58.967 36.000 7.74 7.74 35.84 2.69
1996 2191 6.197096 CCGAGAGTTTGTGTTTCAATTTGAAG 59.803 38.462 11.41 0.00 37.70 3.02
1997 2192 6.291269 CGAGAGTTTGTGTTTCAATTTGAAGC 60.291 38.462 16.39 16.39 37.70 3.86
1998 2193 5.516339 AGAGTTTGTGTTTCAATTTGAAGCG 59.484 36.000 17.57 0.00 39.94 4.68
1999 2194 4.566360 AGTTTGTGTTTCAATTTGAAGCGG 59.434 37.500 17.57 0.00 39.94 5.52
2000 2195 3.090952 TGTGTTTCAATTTGAAGCGGG 57.909 42.857 17.57 0.00 39.94 6.13
2001 2196 2.428890 TGTGTTTCAATTTGAAGCGGGT 59.571 40.909 17.57 0.00 39.94 5.28
2002 2197 3.118956 TGTGTTTCAATTTGAAGCGGGTT 60.119 39.130 17.57 0.00 39.94 4.11
2003 2198 3.868661 GTGTTTCAATTTGAAGCGGGTTT 59.131 39.130 17.57 0.00 39.94 3.27
2004 2199 4.331443 GTGTTTCAATTTGAAGCGGGTTTT 59.669 37.500 17.57 0.00 39.94 2.43
2005 2200 4.331168 TGTTTCAATTTGAAGCGGGTTTTG 59.669 37.500 17.57 0.00 39.94 2.44
2006 2201 3.810310 TCAATTTGAAGCGGGTTTTGT 57.190 38.095 0.00 0.00 0.00 2.83
2007 2202 3.452474 TCAATTTGAAGCGGGTTTTGTG 58.548 40.909 0.00 0.00 0.00 3.33
2008 2203 3.131223 TCAATTTGAAGCGGGTTTTGTGA 59.869 39.130 0.00 0.00 0.00 3.58
2009 2204 3.810310 ATTTGAAGCGGGTTTTGTGAA 57.190 38.095 0.00 0.00 0.00 3.18
2010 2205 3.594603 TTTGAAGCGGGTTTTGTGAAA 57.405 38.095 0.00 0.00 0.00 2.69
2011 2206 3.810310 TTGAAGCGGGTTTTGTGAAAT 57.190 38.095 0.00 0.00 0.00 2.17
2012 2207 3.090952 TGAAGCGGGTTTTGTGAAATG 57.909 42.857 0.00 0.00 0.00 2.32
2013 2208 1.792367 GAAGCGGGTTTTGTGAAATGC 59.208 47.619 0.00 0.00 0.00 3.56
2014 2209 0.033366 AGCGGGTTTTGTGAAATGCC 59.967 50.000 0.00 0.00 0.00 4.40
2015 2210 1.281566 GCGGGTTTTGTGAAATGCCG 61.282 55.000 0.00 0.00 0.00 5.69
2016 2211 0.665972 CGGGTTTTGTGAAATGCCGG 60.666 55.000 0.00 0.00 0.00 6.13
2017 2212 0.948623 GGGTTTTGTGAAATGCCGGC 60.949 55.000 22.73 22.73 0.00 6.13
2018 2213 1.281566 GGTTTTGTGAAATGCCGGCG 61.282 55.000 23.90 0.00 0.00 6.46
2019 2214 1.663074 TTTTGTGAAATGCCGGCGC 60.663 52.632 23.90 11.72 0.00 6.53
2020 2215 2.081425 TTTTGTGAAATGCCGGCGCT 62.081 50.000 23.90 9.04 35.36 5.92
2021 2216 2.470801 TTTGTGAAATGCCGGCGCTC 62.471 55.000 23.90 17.97 35.36 5.03
2022 2217 4.520846 GTGAAATGCCGGCGCTCG 62.521 66.667 23.90 9.53 35.36 5.03
2024 2219 4.223964 GAAATGCCGGCGCTCGTC 62.224 66.667 23.90 10.74 37.11 4.20
2025 2220 4.760047 AAATGCCGGCGCTCGTCT 62.760 61.111 23.90 0.00 37.11 4.18
2029 2224 4.189188 GCCGGCGCTCGTCTCTAA 62.189 66.667 12.58 0.00 37.11 2.10
2030 2225 2.488355 CCGGCGCTCGTCTCTAAA 59.512 61.111 7.64 0.00 37.11 1.85
2031 2226 1.065928 CCGGCGCTCGTCTCTAAAT 59.934 57.895 7.64 0.00 37.11 1.40
2032 2227 0.527817 CCGGCGCTCGTCTCTAAATT 60.528 55.000 7.64 0.00 37.11 1.82
2033 2228 1.278238 CGGCGCTCGTCTCTAAATTT 58.722 50.000 7.64 0.00 0.00 1.82
2034 2229 1.005975 CGGCGCTCGTCTCTAAATTTG 60.006 52.381 7.64 0.00 0.00 2.32
2035 2230 1.327764 GGCGCTCGTCTCTAAATTTGG 59.672 52.381 7.64 0.00 0.00 3.28
2036 2231 2.000447 GCGCTCGTCTCTAAATTTGGT 59.000 47.619 0.00 0.00 0.00 3.67
2037 2232 2.415512 GCGCTCGTCTCTAAATTTGGTT 59.584 45.455 0.00 0.00 0.00 3.67
2038 2233 3.120304 GCGCTCGTCTCTAAATTTGGTTT 60.120 43.478 0.00 0.00 0.00 3.27
2039 2234 4.092383 GCGCTCGTCTCTAAATTTGGTTTA 59.908 41.667 0.00 0.00 0.00 2.01
2040 2235 5.724223 GCGCTCGTCTCTAAATTTGGTTTAG 60.724 44.000 0.00 2.02 46.99 1.85
2079 2274 3.058160 GTGCCTCACATTGCGCCT 61.058 61.111 4.18 0.00 34.08 5.52
2083 2278 0.308993 GCCTCACATTGCGCCTATTC 59.691 55.000 4.18 0.00 0.00 1.75
2088 2283 4.024556 CCTCACATTGCGCCTATTCTTTAG 60.025 45.833 4.18 0.00 0.00 1.85
2091 2286 4.094887 CACATTGCGCCTATTCTTTAGTGT 59.905 41.667 4.18 0.00 0.00 3.55
2116 2312 3.132289 GCAATTTAGGGGGCTTTTACTCC 59.868 47.826 0.00 0.00 0.00 3.85
2126 2322 2.159824 GGCTTTTACTCCGAGAGTTTGC 59.840 50.000 11.09 10.07 40.28 3.68
2160 2356 3.430862 GTGAAATGCCGGCGCTCA 61.431 61.111 23.90 20.45 35.36 4.26
2162 2358 1.153269 TGAAATGCCGGCGCTCATA 60.153 52.632 23.90 2.33 35.36 2.15
2196 2479 1.421268 TCTGGGTTGCTCAATGTGACT 59.579 47.619 0.00 0.00 0.00 3.41
2197 2480 2.637382 TCTGGGTTGCTCAATGTGACTA 59.363 45.455 0.00 0.00 0.00 2.59
2230 2514 8.610035 GTCCATTACTTTTACGGGAATCTTAAG 58.390 37.037 0.00 0.00 0.00 1.85
2304 2588 6.833416 TGTATATTTCCTTTAGCAAGCATGGT 59.167 34.615 0.00 0.00 41.03 3.55
2337 2621 5.858581 GCCATGTTCAGTTTGTAGTGAAATC 59.141 40.000 0.00 0.00 43.45 2.17
2340 2624 6.618287 TGTTCAGTTTGTAGTGAAATCTGG 57.382 37.500 0.00 0.00 43.45 3.86
2354 2638 0.813184 ATCTGGCGTTGATGGCAAAG 59.187 50.000 0.00 0.00 44.45 2.77
2357 2641 2.016318 CTGGCGTTGATGGCAAAGATA 58.984 47.619 0.00 0.00 44.45 1.98
2361 2645 2.880890 GCGTTGATGGCAAAGATAGGAT 59.119 45.455 0.00 0.00 35.84 3.24
2365 2649 5.163622 CGTTGATGGCAAAGATAGGATGTTT 60.164 40.000 0.00 0.00 35.84 2.83
2375 2659 8.462016 GCAAAGATAGGATGTTTGATTTGTAGT 58.538 33.333 11.92 0.00 43.80 2.73
2421 2705 9.581289 TTCTCATTAAAGTACTTGGGAAATTCA 57.419 29.630 9.34 0.00 0.00 2.57
2441 2725 0.539669 TCTCTGTCGGAGCCAACTCA 60.540 55.000 3.55 0.00 45.42 3.41
2450 2734 0.390340 GAGCCAACTCAGATGTGCGA 60.390 55.000 0.00 0.00 42.93 5.10
2482 2766 3.629398 GCCTCAATTCTGTATGTTCCCTG 59.371 47.826 0.00 0.00 0.00 4.45
2570 2863 1.001624 GGCATGCAATTTTTCTCGGC 58.998 50.000 21.36 0.00 0.00 5.54
2571 2864 1.672441 GGCATGCAATTTTTCTCGGCA 60.672 47.619 21.36 0.00 39.03 5.69
2572 2865 1.657094 GCATGCAATTTTTCTCGGCAG 59.343 47.619 14.21 0.00 37.96 4.85
2580 2873 2.831685 TTTTCTCGGCAGTCTGCTTA 57.168 45.000 23.68 11.46 44.28 3.09
2631 2941 1.298157 TTCAGTTTCCGCATGCTCCG 61.298 55.000 17.13 2.91 0.00 4.63
2640 2950 2.268076 GCATGCTCCGTTGGTGGTT 61.268 57.895 11.37 0.00 0.00 3.67
2653 2963 4.621034 CGTTGGTGGTTGCATAGAATTTTC 59.379 41.667 0.00 0.00 0.00 2.29
2673 2983 0.613777 ATGGACCGGTCTCTGGAAAC 59.386 55.000 32.52 14.74 0.00 2.78
2674 2984 0.471211 TGGACCGGTCTCTGGAAACT 60.471 55.000 32.52 0.00 0.00 2.66
2734 3237 8.964476 TTCTGGAAGTGGATCAGTATATTTTC 57.036 34.615 0.00 0.00 33.76 2.29
2737 3240 6.099125 TGGAAGTGGATCAGTATATTTTCGGA 59.901 38.462 0.00 0.00 0.00 4.55
2781 3284 3.755905 TCAATCGCCTGCTTTACAAATGA 59.244 39.130 0.00 0.00 0.00 2.57
2791 3294 7.566709 CCTGCTTTACAAATGAAACAATGTTC 58.433 34.615 0.00 0.00 0.00 3.18
2836 3339 4.430007 TGCATACACTGGATTACGAACTC 58.570 43.478 0.00 0.00 0.00 3.01
2841 3344 3.128242 ACACTGGATTACGAACTCTACGG 59.872 47.826 0.00 0.00 34.93 4.02
2950 3761 9.333724 TCAGATTTTTACTAAGGAAAGTCGTTT 57.666 29.630 0.00 0.00 29.90 3.60
2952 3763 9.333724 AGATTTTTACTAAGGAAAGTCGTTTGA 57.666 29.630 0.44 0.00 29.90 2.69
2996 3879 7.859325 TTGGTGTCTTGGTTTATTATAGAGC 57.141 36.000 0.00 0.00 0.00 4.09
3006 3889 8.492673 TGGTTTATTATAGAGCTTTCAGTGTG 57.507 34.615 0.00 0.00 0.00 3.82
3035 4002 5.470098 ACTGTGTGGTCACTTGTTTCATATC 59.530 40.000 2.66 0.00 44.14 1.63
3121 4088 0.976641 TGCTCGGATCTGTTCCAGTT 59.023 50.000 0.42 0.00 45.78 3.16
3155 4150 5.554437 TGAACCAGTTAAGTGTATGGTGA 57.446 39.130 9.42 0.00 45.21 4.02
3367 4402 4.298626 TCCCTTCTGGTAGTGCATCTTAT 58.701 43.478 0.00 0.00 34.77 1.73
3373 4408 6.791867 TCTGGTAGTGCATCTTATTGTACT 57.208 37.500 0.00 1.08 43.64 2.73
3409 4444 9.883142 AAAGTGAAATTAAAATCTGTTGGAACA 57.117 25.926 0.00 0.00 37.37 3.18
3455 4490 4.520492 CGATATCCTTTGGCCTTTTGCTAT 59.480 41.667 3.32 0.00 40.92 2.97
3462 4499 6.895204 TCCTTTGGCCTTTTGCTATAATAACT 59.105 34.615 3.32 0.00 40.92 2.24
3468 4505 9.250246 TGGCCTTTTGCTATAATAACTAGTTTT 57.750 29.630 14.49 10.27 40.92 2.43
3563 4602 8.929487 TGTTTACCCTCTTATTGTTCCATTTTT 58.071 29.630 0.00 0.00 0.00 1.94
3623 4663 6.806388 ATTGGAAGTTTCAAATTGGCATTC 57.194 33.333 0.00 0.00 26.09 2.67
3644 4684 8.462016 GCATTCATTCTCCTTGTAGTTTTATGT 58.538 33.333 0.00 0.00 0.00 2.29
3848 4894 8.514594 TGATAGGTTGCTCTATTTTTCAGTTTG 58.485 33.333 0.00 0.00 30.75 2.93
4035 5119 6.667370 TGCTTTTCTTGTGTATGTGTATGTG 58.333 36.000 0.00 0.00 0.00 3.21
4086 5180 3.118629 TGGTGCAGAGTGATCCTATGTTC 60.119 47.826 0.00 2.76 34.78 3.18
4275 5369 5.175859 TGTAGAAAGCACATACTTACTGCC 58.824 41.667 0.00 0.00 0.00 4.85
4280 5374 4.021102 AGCACATACTTACTGCCACTTT 57.979 40.909 0.00 0.00 0.00 2.66
4395 6118 4.519540 TTTTGCTTCACCCAAATAGAGC 57.480 40.909 0.00 0.00 32.76 4.09
4421 6144 5.795441 GTCTTAATTGTTTCATTGCGGAGAC 59.205 40.000 0.00 0.00 0.00 3.36
4589 6443 3.893813 ACTTGGCTCAGCAAGATTTTCTT 59.106 39.130 13.72 0.00 37.14 2.52
4643 6497 9.158364 GTTGTGCAAAATCAGTTATATGATACG 57.842 33.333 0.00 0.00 39.00 3.06
4665 6524 4.388165 CGATTCATAATCCAGCTGCAGTAG 59.612 45.833 16.64 8.07 34.35 2.57
4730 6594 7.088589 ACACAAATGCACTCCTGATATTTAC 57.911 36.000 0.00 0.00 0.00 2.01
4749 6613 0.316204 CTTTGCACCCCTTTGCTCTG 59.684 55.000 0.00 0.00 43.41 3.35
4936 6800 5.181245 CACGTTCTCCAAAAGTGTATGGATT 59.819 40.000 0.00 0.00 44.41 3.01
4958 6822 8.931568 GGATTACTTCCTTGGTAGTTATAAGGA 58.068 37.037 4.34 0.00 46.03 3.36
5092 6958 6.002082 AGTGATCAGTAACAACTTAAACCCC 58.998 40.000 0.00 0.00 0.00 4.95
5369 7252 7.011950 TGCCATTGATACCGAGTTTAATTACTG 59.988 37.037 0.00 0.00 0.00 2.74
5712 7595 9.672673 TGGGAGCTTAAATGATTTATCTATAGC 57.327 33.333 9.43 9.43 0.00 2.97
5713 7596 9.898152 GGGAGCTTAAATGATTTATCTATAGCT 57.102 33.333 16.62 16.62 0.00 3.32
5745 7628 3.628942 TGTCAATCATCTGTGGCTTATGC 59.371 43.478 0.00 0.00 38.76 3.14
5791 7680 0.937304 CAAATGGCGACCCTCGTATG 59.063 55.000 0.00 0.00 42.81 2.39
5957 7852 5.848036 CGAAGTTCTGCAGTTTTATGACAAG 59.152 40.000 14.67 0.00 0.00 3.16
6047 7942 1.246649 TGAATGCAAGCACCAACGAT 58.753 45.000 0.00 0.00 0.00 3.73
6077 7984 5.698545 GGTGAGATAGCTACTGCCAATTTAG 59.301 44.000 0.00 0.00 40.80 1.85
6118 8025 7.390440 TGACAATGGACGATACTGAAAAGAAAT 59.610 33.333 0.00 0.00 0.00 2.17
6190 8103 3.142174 GCTACCAGCTTTGTCTGTTTCT 58.858 45.455 0.00 0.00 38.45 2.52
6256 8172 4.637091 TCACACATGAGAATGTAATGCTGG 59.363 41.667 0.00 0.00 26.21 4.85
6297 8215 3.181487 CCGCATATCCTGTTTTTCCCTTG 60.181 47.826 0.00 0.00 0.00 3.61
6302 8220 6.564328 CATATCCTGTTTTTCCCTTGCTTAC 58.436 40.000 0.00 0.00 0.00 2.34
6303 8221 3.904717 TCCTGTTTTTCCCTTGCTTACA 58.095 40.909 0.00 0.00 0.00 2.41
6304 8222 4.282496 TCCTGTTTTTCCCTTGCTTACAA 58.718 39.130 0.00 0.00 0.00 2.41
6305 8223 4.712337 TCCTGTTTTTCCCTTGCTTACAAA 59.288 37.500 0.00 0.00 34.74 2.83
6306 8224 5.365314 TCCTGTTTTTCCCTTGCTTACAAAT 59.635 36.000 0.00 0.00 34.74 2.32
6496 8414 2.277084 GTCACCTATTGGTACGGCAAG 58.723 52.381 0.00 0.00 46.60 4.01
6500 8432 2.277084 CCTATTGGTACGGCAAGTGAC 58.723 52.381 0.00 0.00 0.00 3.67
6533 8467 6.647334 TTGTTCCTGAAATGTTGCTGAATA 57.353 33.333 0.00 0.00 0.00 1.75
6534 8468 6.647334 TGTTCCTGAAATGTTGCTGAATAA 57.353 33.333 0.00 0.00 0.00 1.40
6535 8469 7.230849 TGTTCCTGAAATGTTGCTGAATAAT 57.769 32.000 0.00 0.00 0.00 1.28
6577 8511 7.445945 AGCAACCTATAGAATAACTGATGGTC 58.554 38.462 0.00 0.00 0.00 4.02
6649 8588 3.132467 GGCACCTAGATTTCTTAGACCGT 59.868 47.826 0.00 0.00 0.00 4.83
6874 8827 9.871238 ACGGTATGTAATCATTAATATCCTCAC 57.129 33.333 0.00 0.00 35.70 3.51
6878 8831 8.777865 ATGTAATCATTAATATCCTCACGTGG 57.222 34.615 17.00 6.38 0.00 4.94
6887 8840 1.669115 CCTCACGTGGCCTCTGTTG 60.669 63.158 17.00 0.00 0.00 3.33
7082 9038 5.927281 AATCTTTCATCCCCTGAACATTG 57.073 39.130 0.00 0.00 43.54 2.82
7250 9474 2.512885 GTCAGCATCAGTTTCGCATTG 58.487 47.619 0.00 0.00 0.00 2.82
7494 9733 2.673523 CTCCCCAGCTGTGAAGGG 59.326 66.667 17.30 17.30 42.44 3.95
7528 9772 3.625897 CACCCCACACGAGCTGGA 61.626 66.667 1.44 0.00 0.00 3.86
7538 9782 2.881352 GAGCTGGACTGCGCGTAC 60.881 66.667 8.43 5.18 38.13 3.67
7539 9783 3.343788 GAGCTGGACTGCGCGTACT 62.344 63.158 8.43 0.00 38.13 2.73
7546 9790 2.646862 CTGCGCGTACTCGTACCG 60.647 66.667 8.43 11.25 39.49 4.02
7583 9829 0.884514 CTGCCGTCTCTCTGTCTGAA 59.115 55.000 0.00 0.00 0.00 3.02
7584 9830 1.476085 CTGCCGTCTCTCTGTCTGAAT 59.524 52.381 0.00 0.00 0.00 2.57
7585 9831 1.203287 TGCCGTCTCTCTGTCTGAATG 59.797 52.381 0.00 0.00 0.00 2.67
7586 9832 1.474478 GCCGTCTCTCTGTCTGAATGA 59.526 52.381 0.00 0.00 0.00 2.57
7589 9835 3.181501 CCGTCTCTCTGTCTGAATGACTC 60.182 52.174 0.00 0.00 45.54 3.36
7643 9901 3.527434 GGTACTGAACCCCGTTGAG 57.473 57.895 0.00 0.00 43.16 3.02
7659 9917 3.288092 GTTGAGAACTTTTCCACCCAGT 58.712 45.455 0.00 0.00 0.00 4.00
7662 9920 5.118729 TGAGAACTTTTCCACCCAGTTTA 57.881 39.130 0.00 0.00 30.71 2.01
7663 9921 5.130350 TGAGAACTTTTCCACCCAGTTTAG 58.870 41.667 0.00 0.00 30.71 1.85
7666 9924 3.828921 ACTTTTCCACCCAGTTTAGGAC 58.171 45.455 0.00 0.00 0.00 3.85
7667 9925 2.554370 TTTCCACCCAGTTTAGGACG 57.446 50.000 0.00 0.00 0.00 4.79
7668 9926 0.035739 TTCCACCCAGTTTAGGACGC 59.964 55.000 0.00 0.00 0.00 5.19
7669 9927 1.376812 CCACCCAGTTTAGGACGCC 60.377 63.158 0.00 0.00 0.00 5.68
7671 9929 2.818274 CCCAGTTTAGGACGCCGC 60.818 66.667 0.00 0.00 0.00 6.53
7672 9930 2.264794 CCAGTTTAGGACGCCGCT 59.735 61.111 0.00 0.00 0.00 5.52
7673 9931 2.100631 CCAGTTTAGGACGCCGCTG 61.101 63.158 0.00 0.00 0.00 5.18
7674 9932 2.434359 AGTTTAGGACGCCGCTGC 60.434 61.111 0.00 0.00 0.00 5.25
7675 9933 2.740826 GTTTAGGACGCCGCTGCA 60.741 61.111 0.00 0.00 37.32 4.41
7676 9934 2.031314 TTTAGGACGCCGCTGCAA 59.969 55.556 0.00 0.00 37.32 4.08
7677 9935 1.598407 TTTAGGACGCCGCTGCAAA 60.598 52.632 0.00 0.00 37.32 3.68
7693 9951 4.463209 CTGCAAACAAACACTACGTATGG 58.537 43.478 0.00 0.00 0.00 2.74
7710 9975 6.686130 CGTATGGAAAATGAGATACGTACC 57.314 41.667 0.00 0.00 39.07 3.34
7711 9976 6.444633 CGTATGGAAAATGAGATACGTACCT 58.555 40.000 0.00 0.00 39.07 3.08
7713 9978 7.114529 CGTATGGAAAATGAGATACGTACCTTC 59.885 40.741 0.00 0.00 39.07 3.46
7715 9980 6.570692 TGGAAAATGAGATACGTACCTTCTC 58.429 40.000 14.92 14.92 37.10 2.87
7720 9987 3.624861 TGAGATACGTACCTTCTCGGTTC 59.375 47.826 16.13 0.06 46.37 3.62
7785 10066 1.542472 GAGTTATCTCCTAGGCGAGGC 59.458 57.143 9.03 0.31 46.25 4.70
7786 10067 0.241481 GTTATCTCCTAGGCGAGGCG 59.759 60.000 9.03 2.61 46.25 5.52
7787 10068 0.109913 TTATCTCCTAGGCGAGGCGA 59.890 55.000 8.81 8.81 46.25 5.54
7817 10098 6.710295 TCTTGTCACTGTGTACATTTGCTTAT 59.290 34.615 7.79 0.00 0.00 1.73
7917 10206 3.565516 GTGAAGGAGAAAAATTGCGGAC 58.434 45.455 0.00 0.00 0.00 4.79
7955 10244 8.239314 ACATTTGTTAAGCAGAGACATAATGTG 58.761 33.333 0.00 0.00 35.81 3.21
7965 10260 4.469227 AGAGACATAATGTGCTCTCCTGTT 59.531 41.667 0.00 0.00 36.97 3.16
7977 10272 6.116126 GTGCTCTCCTGTTGAATAAATAGGT 58.884 40.000 1.49 0.00 45.18 3.08
8005 10344 4.075682 TGAAATTAGTCAATTCCGGTGCA 58.924 39.130 0.00 0.00 33.09 4.57
8016 10355 1.303724 CCGGTGCAAACATACCCCA 60.304 57.895 0.00 0.00 33.32 4.96
8020 10359 2.416701 CGGTGCAAACATACCCCATTTC 60.417 50.000 0.00 0.00 33.32 2.17
8041 10380 3.112709 GCCGCGAGTCCAACTCAC 61.113 66.667 8.23 0.00 45.30 3.51
8051 10390 1.272769 GTCCAACTCACGCTAGGACTT 59.727 52.381 0.00 0.00 44.10 3.01
8052 10391 1.272490 TCCAACTCACGCTAGGACTTG 59.728 52.381 0.00 0.00 0.00 3.16
8070 10409 1.604604 TGGCCTCTCTTTCGGTTTTG 58.395 50.000 3.32 0.00 0.00 2.44
8127 10481 4.139786 AGGAGTTTCCCCTTACGAAAAAC 58.860 43.478 0.00 0.00 37.19 2.43
8136 10490 2.004733 CTTACGAAAAACCCTAGGGCG 58.995 52.381 28.88 23.55 39.32 6.13
8225 10579 4.777366 CCAAGAATCACCCCCAAACTTTAT 59.223 41.667 0.00 0.00 0.00 1.40
8227 10581 6.611236 CCAAGAATCACCCCCAAACTTTATAT 59.389 38.462 0.00 0.00 0.00 0.86
8301 10663 0.617413 ACTTGGATCACCTGGCTCTG 59.383 55.000 0.00 0.00 37.04 3.35
8304 10666 0.252421 TGGATCACCTGGCTCTGACT 60.252 55.000 0.00 0.00 37.04 3.41
8309 10671 1.768275 TCACCTGGCTCTGACTCAAAA 59.232 47.619 0.00 0.00 0.00 2.44
8325 10690 3.887335 AAACCACGTATGCGCCCGT 62.887 57.895 4.18 8.13 42.83 5.28
8332 10697 3.761140 TATGCGCCCGTCGGACAA 61.761 61.111 14.39 0.00 42.53 3.18
8347 10732 0.318699 GACAACCAAGCGCCCTTTTC 60.319 55.000 2.29 0.00 0.00 2.29
8362 10747 2.684881 CCTTTTCATACTCGGCTTGCAT 59.315 45.455 0.00 0.00 0.00 3.96
8379 10764 1.560923 CATTGGTAGAAGCCGAGTCG 58.439 55.000 5.29 5.29 0.00 4.18
8380 10765 0.179108 ATTGGTAGAAGCCGAGTCGC 60.179 55.000 7.12 2.73 0.00 5.19
8381 10766 2.278013 GGTAGAAGCCGAGTCGCG 60.278 66.667 7.12 0.00 40.47 5.87
8474 10881 4.104102 ACCCTCTAAGTGGTTGATCAAACA 59.896 41.667 22.25 22.25 40.86 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.536281 TGTTGAGGATATCGTTTATCGTTATCG 59.464 37.037 0.00 0.00 44.98 2.92
1 2 8.738199 TGTTGAGGATATCGTTTATCGTTATC 57.262 34.615 0.00 8.75 44.12 1.75
4 5 7.709182 TCAATGTTGAGGATATCGTTTATCGTT 59.291 33.333 0.00 0.00 35.45 3.85
6 7 7.637709 TCAATGTTGAGGATATCGTTTATCG 57.362 36.000 0.00 0.00 35.34 2.92
7 8 9.817365 CAATCAATGTTGAGGATATCGTTTATC 57.183 33.333 0.00 1.13 41.08 1.75
9 10 8.956533 TCAATCAATGTTGAGGATATCGTTTA 57.043 30.769 0.00 0.00 41.08 2.01
10 11 7.864108 TCAATCAATGTTGAGGATATCGTTT 57.136 32.000 0.00 0.00 41.08 3.60
21 22 7.615403 AGCTTAGTACTCTCAATCAATGTTGA 58.385 34.615 0.00 0.00 42.14 3.18
22 23 7.840342 AGCTTAGTACTCTCAATCAATGTTG 57.160 36.000 0.00 0.00 0.00 3.33
32 33 9.832445 CCCAAATTTATAAGCTTAGTACTCTCA 57.168 33.333 12.54 0.00 0.00 3.27
33 34 8.775527 GCCCAAATTTATAAGCTTAGTACTCTC 58.224 37.037 12.54 0.00 0.00 3.20
34 35 8.495260 AGCCCAAATTTATAAGCTTAGTACTCT 58.505 33.333 12.54 0.00 0.00 3.24
35 36 8.678593 AGCCCAAATTTATAAGCTTAGTACTC 57.321 34.615 12.54 0.00 0.00 2.59
48 49 9.372189 AGCTCTAAATATGAAGCCCAAATTTAT 57.628 29.630 0.00 0.00 0.00 1.40
56 57 3.416156 CCCAGCTCTAAATATGAAGCCC 58.584 50.000 0.00 0.00 0.00 5.19
63 64 3.160269 GCCAATGCCCAGCTCTAAATAT 58.840 45.455 0.00 0.00 0.00 1.28
69 70 1.681327 CTTGCCAATGCCCAGCTCT 60.681 57.895 0.00 0.00 36.33 4.09
81 82 1.053835 TCCACTGGTCTCACTTGCCA 61.054 55.000 0.00 0.00 0.00 4.92
115 124 1.286260 GCCACAGAAGTCTCGACGT 59.714 57.895 0.00 0.00 36.20 4.34
118 127 0.318699 CGTTGCCACAGAAGTCTCGA 60.319 55.000 0.00 0.00 0.00 4.04
119 128 0.318699 TCGTTGCCACAGAAGTCTCG 60.319 55.000 0.00 0.00 0.00 4.04
128 137 1.732941 GTACCATCATCGTTGCCACA 58.267 50.000 0.00 0.00 0.00 4.17
130 139 0.533032 TCGTACCATCATCGTTGCCA 59.467 50.000 0.00 0.00 0.00 4.92
132 141 0.577269 GCTCGTACCATCATCGTTGC 59.423 55.000 0.00 0.00 0.00 4.17
141 150 1.335182 CTCAGTCATCGCTCGTACCAT 59.665 52.381 0.00 0.00 0.00 3.55
145 154 0.733150 CACCTCAGTCATCGCTCGTA 59.267 55.000 0.00 0.00 0.00 3.43
152 161 0.326264 AGCCAACCACCTCAGTCATC 59.674 55.000 0.00 0.00 0.00 2.92
157 166 0.689623 AGAAGAGCCAACCACCTCAG 59.310 55.000 0.00 0.00 0.00 3.35
164 189 2.288886 ACACGTTAGAGAAGAGCCAACC 60.289 50.000 0.00 0.00 0.00 3.77
167 192 2.351447 CGAACACGTTAGAGAAGAGCCA 60.351 50.000 0.00 0.00 0.00 4.75
178 203 2.562298 AGGTAATCCCACGAACACGTTA 59.438 45.455 0.00 0.00 38.21 3.18
179 204 1.345415 AGGTAATCCCACGAACACGTT 59.655 47.619 0.00 0.00 38.21 3.99
207 232 3.351740 TCTGACTTCACCACAGCAAAAA 58.648 40.909 0.00 0.00 0.00 1.94
230 255 4.966787 GAAGGCCCGCCACCACAA 62.967 66.667 8.74 0.00 38.92 3.33
246 271 1.374125 CTGTCATCGTTGCCACCGA 60.374 57.895 0.00 0.00 38.89 4.69
249 274 0.036765 TACCCTGTCATCGTTGCCAC 60.037 55.000 0.00 0.00 0.00 5.01
252 277 2.024176 ACATACCCTGTCATCGTTGC 57.976 50.000 0.00 0.00 29.94 4.17
266 291 2.159627 CGCTGAAGGTCACCAAACATAC 59.840 50.000 0.00 0.00 0.00 2.39
285 310 0.041839 CTATGCAAGATTGACGCCGC 60.042 55.000 0.00 0.00 0.00 6.53
291 316 6.801539 AACGAAGAAACTATGCAAGATTGA 57.198 33.333 0.00 0.00 0.00 2.57
304 329 6.128117 TGCCCTGAATGTAATAACGAAGAAAC 60.128 38.462 0.00 0.00 0.00 2.78
305 330 5.941058 TGCCCTGAATGTAATAACGAAGAAA 59.059 36.000 0.00 0.00 0.00 2.52
310 335 6.576662 TTTTTGCCCTGAATGTAATAACGA 57.423 33.333 0.00 0.00 0.00 3.85
344 373 6.745907 GCACCGAAAAATACTGAAAATCCTAC 59.254 38.462 0.00 0.00 0.00 3.18
349 378 6.074569 CGTTTGCACCGAAAAATACTGAAAAT 60.075 34.615 0.00 0.00 0.00 1.82
354 383 3.879427 TCGTTTGCACCGAAAAATACTG 58.121 40.909 5.25 0.00 0.00 2.74
380 410 2.519377 TCTGTTCCGTTGTGATTCGT 57.481 45.000 0.00 0.00 0.00 3.85
398 428 4.012374 TGCTCAATCCTTCTTGACCATTC 58.988 43.478 0.00 0.00 31.98 2.67
442 472 3.194005 ACGAGAAATTCATACGGGCAT 57.806 42.857 10.52 0.00 0.00 4.40
445 475 4.085055 CGATCAACGAGAAATTCATACGGG 60.085 45.833 10.52 4.55 45.77 5.28
462 492 3.220110 AGATAGCTTACCGACCGATCAA 58.780 45.455 0.00 0.00 0.00 2.57
464 494 3.075884 AGAGATAGCTTACCGACCGATC 58.924 50.000 0.00 0.00 0.00 3.69
466 496 2.158856 TGAGAGATAGCTTACCGACCGA 60.159 50.000 0.00 0.00 0.00 4.69
467 497 2.219458 TGAGAGATAGCTTACCGACCG 58.781 52.381 0.00 0.00 0.00 4.79
468 498 3.243468 GGTTGAGAGATAGCTTACCGACC 60.243 52.174 0.00 0.00 0.00 4.79
469 499 3.548415 CGGTTGAGAGATAGCTTACCGAC 60.548 52.174 15.37 3.96 43.27 4.79
470 500 2.617308 CGGTTGAGAGATAGCTTACCGA 59.383 50.000 15.37 0.00 43.27 4.69
472 502 2.745102 GCGGTTGAGAGATAGCTTACC 58.255 52.381 0.00 0.00 0.00 2.85
473 503 2.223525 ACGCGGTTGAGAGATAGCTTAC 60.224 50.000 12.47 0.00 0.00 2.34
476 506 0.101399 CACGCGGTTGAGAGATAGCT 59.899 55.000 12.47 0.00 0.00 3.32
478 508 1.132453 TCACACGCGGTTGAGAGATAG 59.868 52.381 12.47 0.00 0.00 2.08
479 509 1.170442 TCACACGCGGTTGAGAGATA 58.830 50.000 12.47 0.00 0.00 1.98
480 510 0.532573 ATCACACGCGGTTGAGAGAT 59.467 50.000 12.47 4.85 0.00 2.75
481 511 0.388520 CATCACACGCGGTTGAGAGA 60.389 55.000 12.47 2.61 0.00 3.10
482 512 0.388520 TCATCACACGCGGTTGAGAG 60.389 55.000 12.47 9.29 0.00 3.20
484 514 1.354337 CCTCATCACACGCGGTTGAG 61.354 60.000 12.47 15.03 33.76 3.02
485 515 1.374125 CCTCATCACACGCGGTTGA 60.374 57.895 12.47 13.07 0.00 3.18
486 516 0.948623 TTCCTCATCACACGCGGTTG 60.949 55.000 12.47 7.01 0.00 3.77
499 568 0.109272 GATCGCCGCGATATTCCTCA 60.109 55.000 27.35 0.00 47.00 3.86
502 571 0.109272 TGAGATCGCCGCGATATTCC 60.109 55.000 27.35 15.20 47.00 3.01
503 572 1.135660 TCTGAGATCGCCGCGATATTC 60.136 52.381 27.35 24.79 47.00 1.75
549 619 2.687566 TTCCTCCTCCTTCGGGGC 60.688 66.667 0.00 0.00 35.37 5.80
558 628 0.962356 TCGTACACGGGTTCCTCCTC 60.962 60.000 0.00 0.00 40.29 3.71
566 636 2.633509 GGTGCTCTCGTACACGGGT 61.634 63.158 0.00 0.00 41.39 5.28
567 637 1.945354 ATGGTGCTCTCGTACACGGG 61.945 60.000 1.39 0.00 42.17 5.28
576 646 2.541120 GCGGATGCATGGTGCTCTC 61.541 63.158 2.46 0.00 45.31 3.20
577 647 2.515523 GCGGATGCATGGTGCTCT 60.516 61.111 2.46 0.00 45.31 4.09
625 695 9.852091 CGGTTACTACCAGTATATTATTCTTCC 57.148 37.037 0.00 0.00 45.31 3.46
632 702 9.407380 TGTTCTTCGGTTACTACCAGTATATTA 57.593 33.333 0.00 0.00 45.31 0.98
633 703 8.297470 TGTTCTTCGGTTACTACCAGTATATT 57.703 34.615 0.00 0.00 45.31 1.28
634 704 7.014038 CCTGTTCTTCGGTTACTACCAGTATAT 59.986 40.741 0.00 0.00 45.31 0.86
635 705 6.319658 CCTGTTCTTCGGTTACTACCAGTATA 59.680 42.308 0.00 0.00 45.31 1.47
636 706 5.126707 CCTGTTCTTCGGTTACTACCAGTAT 59.873 44.000 0.00 0.00 45.31 2.12
637 707 4.460382 CCTGTTCTTCGGTTACTACCAGTA 59.540 45.833 0.00 0.00 45.31 2.74
638 708 3.257624 CCTGTTCTTCGGTTACTACCAGT 59.742 47.826 0.00 0.00 45.31 4.00
639 709 3.508793 TCCTGTTCTTCGGTTACTACCAG 59.491 47.826 0.00 0.00 45.31 4.00
640 710 3.499338 TCCTGTTCTTCGGTTACTACCA 58.501 45.455 0.00 0.00 45.31 3.25
641 711 3.675502 GCTCCTGTTCTTCGGTTACTACC 60.676 52.174 0.00 0.00 41.33 3.18
642 712 3.509740 GCTCCTGTTCTTCGGTTACTAC 58.490 50.000 0.00 0.00 0.00 2.73
643 713 2.494870 GGCTCCTGTTCTTCGGTTACTA 59.505 50.000 0.00 0.00 0.00 1.82
644 714 1.275573 GGCTCCTGTTCTTCGGTTACT 59.724 52.381 0.00 0.00 0.00 2.24
645 715 1.723220 GGCTCCTGTTCTTCGGTTAC 58.277 55.000 0.00 0.00 0.00 2.50
646 716 0.245539 CGGCTCCTGTTCTTCGGTTA 59.754 55.000 0.00 0.00 0.00 2.85
647 717 1.004918 CGGCTCCTGTTCTTCGGTT 60.005 57.895 0.00 0.00 0.00 4.44
648 718 1.755393 AACGGCTCCTGTTCTTCGGT 61.755 55.000 0.00 0.00 0.00 4.69
688 767 0.111253 CCAGAGCTGGGGTTGAGTTT 59.889 55.000 8.69 0.00 46.81 2.66
722 802 4.473520 GCCGCTTGCCCTGCTCTA 62.474 66.667 0.00 0.00 0.00 2.43
731 811 4.503314 GATGGGCTTGCCGCTTGC 62.503 66.667 5.49 0.00 39.13 4.01
732 812 2.753043 AGATGGGCTTGCCGCTTG 60.753 61.111 5.49 0.00 39.13 4.01
733 813 2.753043 CAGATGGGCTTGCCGCTT 60.753 61.111 5.49 0.00 39.13 4.68
734 814 3.720601 TCAGATGGGCTTGCCGCT 61.721 61.111 5.49 0.39 39.13 5.52
735 815 3.512516 GTCAGATGGGCTTGCCGC 61.513 66.667 5.49 0.00 38.13 6.53
736 816 3.197790 CGTCAGATGGGCTTGCCG 61.198 66.667 5.49 0.00 0.00 5.69
761 841 1.005037 AGCGCACGATGTGGAAGAA 60.005 52.632 11.47 0.00 33.64 2.52
790 874 0.242017 CTGCAAAAAGGAAGGAGCCG 59.758 55.000 0.00 0.00 0.00 5.52
925 1029 0.605589 ACTTGCCGAGAGAGAGTTGG 59.394 55.000 0.00 0.00 0.00 3.77
938 1054 6.237313 AGTTTGAATACGAGTTTACTTGCC 57.763 37.500 0.00 0.00 0.00 4.52
969 1085 0.611340 ACTCCGGAGCGAGTAAACCT 60.611 55.000 31.56 4.57 41.37 3.50
971 1087 0.522915 CGACTCCGGAGCGAGTAAAC 60.523 60.000 31.54 14.26 43.22 2.01
972 1088 0.674581 TCGACTCCGGAGCGAGTAAA 60.675 55.000 32.77 18.99 43.22 2.01
1158 1316 0.392193 AAGCAAGCATCACCTCGAGG 60.392 55.000 30.11 30.11 42.17 4.63
1173 1331 4.087892 GAGGGGAGCGAGCAAGCA 62.088 66.667 6.21 0.00 40.15 3.91
1192 1355 1.141234 ACTAGCTAGGGTTTCGCGC 59.859 57.895 24.35 0.00 0.00 6.86
1711 1881 4.217159 CGATTCCCGACGACCCCC 62.217 72.222 0.00 0.00 41.76 5.40
1712 1882 4.886121 GCGATTCCCGACGACCCC 62.886 72.222 0.00 0.00 41.76 4.95
1713 1883 3.834799 AGCGATTCCCGACGACCC 61.835 66.667 0.00 0.00 41.76 4.46
1714 1884 2.582498 CAGCGATTCCCGACGACC 60.582 66.667 0.00 0.00 41.76 4.79
1715 1885 2.582498 CCAGCGATTCCCGACGAC 60.582 66.667 0.00 0.00 41.76 4.34
1716 1886 4.508128 GCCAGCGATTCCCGACGA 62.508 66.667 0.00 0.00 41.76 4.20
1718 1888 4.467084 TGGCCAGCGATTCCCGAC 62.467 66.667 0.00 0.00 41.76 4.79
1719 1889 4.467084 GTGGCCAGCGATTCCCGA 62.467 66.667 5.11 0.00 41.76 5.14
1734 1904 3.068064 GCCCACCAAATCCCCGTG 61.068 66.667 0.00 0.00 0.00 4.94
1876 2071 2.888594 TCTAAACCAGAATCGAAGCGG 58.111 47.619 0.00 0.00 0.00 5.52
1915 2110 1.535204 CCGCAAAGGGAGGCACATTT 61.535 55.000 0.00 0.00 35.97 2.32
1916 2111 1.978617 CCGCAAAGGGAGGCACATT 60.979 57.895 0.00 0.00 35.97 2.71
1918 2113 1.558167 TATCCGCAAAGGGAGGCACA 61.558 55.000 0.00 0.00 40.02 4.57
1919 2114 0.179018 ATATCCGCAAAGGGAGGCAC 60.179 55.000 0.00 0.00 40.02 5.01
1920 2115 0.550914 AATATCCGCAAAGGGAGGCA 59.449 50.000 0.00 0.00 40.02 4.75
1921 2116 1.692411 AAATATCCGCAAAGGGAGGC 58.308 50.000 0.00 0.00 40.02 4.70
1939 2134 4.932200 CCCCTAAATTGCACGCATTAAAAA 59.068 37.500 0.00 0.00 0.00 1.94
1940 2135 4.021016 ACCCCTAAATTGCACGCATTAAAA 60.021 37.500 0.00 0.00 0.00 1.52
1941 2136 3.511934 ACCCCTAAATTGCACGCATTAAA 59.488 39.130 0.00 0.00 0.00 1.52
1942 2137 3.093057 ACCCCTAAATTGCACGCATTAA 58.907 40.909 0.00 0.00 0.00 1.40
1943 2138 2.729194 ACCCCTAAATTGCACGCATTA 58.271 42.857 0.00 0.00 0.00 1.90
1944 2139 1.555967 ACCCCTAAATTGCACGCATT 58.444 45.000 0.00 0.00 0.00 3.56
1945 2140 2.428544 TACCCCTAAATTGCACGCAT 57.571 45.000 0.00 0.00 0.00 4.73
1946 2141 2.428544 ATACCCCTAAATTGCACGCA 57.571 45.000 0.00 0.00 0.00 5.24
1947 2142 3.793797 AAATACCCCTAAATTGCACGC 57.206 42.857 0.00 0.00 0.00 5.34
1948 2143 5.584442 GGTAAAATACCCCTAAATTGCACG 58.416 41.667 0.00 0.00 43.18 5.34
1962 2157 6.549912 AACACAAACTCTCGGGTAAAATAC 57.450 37.500 0.00 0.00 0.00 1.89
1963 2158 6.766944 TGAAACACAAACTCTCGGGTAAAATA 59.233 34.615 0.00 0.00 0.00 1.40
1964 2159 5.591067 TGAAACACAAACTCTCGGGTAAAAT 59.409 36.000 0.00 0.00 0.00 1.82
1965 2160 4.942483 TGAAACACAAACTCTCGGGTAAAA 59.058 37.500 0.00 0.00 0.00 1.52
1966 2161 4.515361 TGAAACACAAACTCTCGGGTAAA 58.485 39.130 0.00 0.00 0.00 2.01
1967 2162 4.139859 TGAAACACAAACTCTCGGGTAA 57.860 40.909 0.00 0.00 0.00 2.85
1968 2163 3.823281 TGAAACACAAACTCTCGGGTA 57.177 42.857 0.00 0.00 0.00 3.69
1969 2164 2.702592 TGAAACACAAACTCTCGGGT 57.297 45.000 0.00 0.00 0.00 5.28
1970 2165 4.568152 AATTGAAACACAAACTCTCGGG 57.432 40.909 0.00 0.00 42.03 5.14
1971 2166 5.577835 TCAAATTGAAACACAAACTCTCGG 58.422 37.500 0.00 0.00 42.03 4.63
1972 2167 6.291269 GCTTCAAATTGAAACACAAACTCTCG 60.291 38.462 9.85 0.00 42.03 4.04
1973 2168 6.291269 CGCTTCAAATTGAAACACAAACTCTC 60.291 38.462 9.85 0.00 42.03 3.20
1974 2169 5.516339 CGCTTCAAATTGAAACACAAACTCT 59.484 36.000 9.85 0.00 42.03 3.24
1975 2170 5.276348 CCGCTTCAAATTGAAACACAAACTC 60.276 40.000 9.85 0.00 42.03 3.01
1976 2171 4.566360 CCGCTTCAAATTGAAACACAAACT 59.434 37.500 9.85 0.00 42.03 2.66
1977 2172 4.260172 CCCGCTTCAAATTGAAACACAAAC 60.260 41.667 9.85 0.00 42.03 2.93
1978 2173 3.868077 CCCGCTTCAAATTGAAACACAAA 59.132 39.130 9.85 0.00 42.03 2.83
1979 2174 3.118956 ACCCGCTTCAAATTGAAACACAA 60.119 39.130 9.85 0.00 42.95 3.33
1980 2175 2.428890 ACCCGCTTCAAATTGAAACACA 59.571 40.909 9.85 0.00 35.73 3.72
1981 2176 3.092334 ACCCGCTTCAAATTGAAACAC 57.908 42.857 9.85 2.04 35.73 3.32
1982 2177 3.810310 AACCCGCTTCAAATTGAAACA 57.190 38.095 9.85 0.00 35.73 2.83
1983 2178 4.331443 ACAAAACCCGCTTCAAATTGAAAC 59.669 37.500 9.85 4.51 35.73 2.78
1984 2179 4.331168 CACAAAACCCGCTTCAAATTGAAA 59.669 37.500 9.85 0.00 35.73 2.69
1985 2180 3.868077 CACAAAACCCGCTTCAAATTGAA 59.132 39.130 8.25 8.25 34.79 2.69
1986 2181 3.131223 TCACAAAACCCGCTTCAAATTGA 59.869 39.130 0.00 0.00 0.00 2.57
1987 2182 3.452474 TCACAAAACCCGCTTCAAATTG 58.548 40.909 0.00 0.00 0.00 2.32
1988 2183 3.810310 TCACAAAACCCGCTTCAAATT 57.190 38.095 0.00 0.00 0.00 1.82
1989 2184 3.810310 TTCACAAAACCCGCTTCAAAT 57.190 38.095 0.00 0.00 0.00 2.32
1990 2185 3.594603 TTTCACAAAACCCGCTTCAAA 57.405 38.095 0.00 0.00 0.00 2.69
1991 2186 3.452474 CATTTCACAAAACCCGCTTCAA 58.548 40.909 0.00 0.00 0.00 2.69
1992 2187 2.801342 GCATTTCACAAAACCCGCTTCA 60.801 45.455 0.00 0.00 0.00 3.02
1993 2188 1.792367 GCATTTCACAAAACCCGCTTC 59.208 47.619 0.00 0.00 0.00 3.86
1994 2189 1.540146 GGCATTTCACAAAACCCGCTT 60.540 47.619 0.00 0.00 0.00 4.68
1995 2190 0.033366 GGCATTTCACAAAACCCGCT 59.967 50.000 0.00 0.00 0.00 5.52
1996 2191 1.281566 CGGCATTTCACAAAACCCGC 61.282 55.000 0.00 0.00 36.46 6.13
1997 2192 0.665972 CCGGCATTTCACAAAACCCG 60.666 55.000 0.00 0.00 40.01 5.28
1998 2193 0.948623 GCCGGCATTTCACAAAACCC 60.949 55.000 24.80 0.00 0.00 4.11
1999 2194 1.281566 CGCCGGCATTTCACAAAACC 61.282 55.000 28.98 0.00 0.00 3.27
2000 2195 1.885814 GCGCCGGCATTTCACAAAAC 61.886 55.000 28.98 0.00 39.62 2.43
2001 2196 1.663074 GCGCCGGCATTTCACAAAA 60.663 52.632 28.98 0.00 39.62 2.44
2002 2197 2.049618 GCGCCGGCATTTCACAAA 60.050 55.556 28.98 0.00 39.62 2.83
2003 2198 2.976840 GAGCGCCGGCATTTCACAA 61.977 57.895 28.98 0.00 43.41 3.33
2004 2199 3.430862 GAGCGCCGGCATTTCACA 61.431 61.111 28.98 0.00 43.41 3.58
2005 2200 4.520846 CGAGCGCCGGCATTTCAC 62.521 66.667 28.98 9.60 43.41 3.18
2013 2208 0.527817 AATTTAGAGACGAGCGCCGG 60.528 55.000 19.73 0.00 43.93 6.13
2014 2209 1.005975 CAAATTTAGAGACGAGCGCCG 60.006 52.381 15.25 15.25 45.44 6.46
2015 2210 1.327764 CCAAATTTAGAGACGAGCGCC 59.672 52.381 2.29 0.00 0.00 6.53
2016 2211 2.000447 ACCAAATTTAGAGACGAGCGC 59.000 47.619 0.00 0.00 0.00 5.92
2017 2212 4.663636 AAACCAAATTTAGAGACGAGCG 57.336 40.909 0.00 0.00 0.00 5.03
2032 2227 9.249053 TGCATATAAAAAGTGGATCTAAACCAA 57.751 29.630 0.00 0.00 39.22 3.67
2033 2228 8.815565 TGCATATAAAAAGTGGATCTAAACCA 57.184 30.769 0.00 0.00 34.84 3.67
2034 2229 9.736023 CTTGCATATAAAAAGTGGATCTAAACC 57.264 33.333 0.00 0.00 0.00 3.27
2069 2264 4.094887 CACACTAAAGAATAGGCGCAATGT 59.905 41.667 10.83 0.00 0.00 2.71
2071 2266 3.065371 GCACACTAAAGAATAGGCGCAAT 59.935 43.478 10.83 0.00 0.00 3.56
2079 2274 6.183360 CCCTAAATTGCGCACACTAAAGAATA 60.183 38.462 11.12 0.00 0.00 1.75
2083 2278 3.427503 CCCCTAAATTGCGCACACTAAAG 60.428 47.826 11.12 2.92 0.00 1.85
2088 2283 1.510844 CCCCCTAAATTGCGCACAC 59.489 57.895 11.12 0.00 0.00 3.82
2091 2286 0.902516 AAAGCCCCCTAAATTGCGCA 60.903 50.000 5.66 5.66 0.00 6.09
2116 2312 1.663494 GCTTCAAACGCAAACTCTCG 58.337 50.000 0.00 0.00 0.00 4.04
2126 2322 1.196200 CACAAAACCCGCTTCAAACG 58.804 50.000 0.00 0.00 0.00 3.60
2160 2356 5.472301 ACCCAGAACCCAAATTCAGATAT 57.528 39.130 0.00 0.00 0.00 1.63
2162 2358 3.833559 ACCCAGAACCCAAATTCAGAT 57.166 42.857 0.00 0.00 0.00 2.90
2196 2479 5.806502 CCGTAAAAGTAATGGACACGTGATA 59.193 40.000 25.01 8.11 0.00 2.15
2197 2480 4.628333 CCGTAAAAGTAATGGACACGTGAT 59.372 41.667 25.01 6.44 0.00 3.06
2282 2566 7.896383 TTACCATGCTTGCTAAAGGAAATAT 57.104 32.000 0.00 0.00 37.29 1.28
2304 2588 5.304101 ACAAACTGAACATGGCAAGGATTTA 59.696 36.000 0.00 0.00 0.00 1.40
2316 2600 6.294176 GCCAGATTTCACTACAAACTGAACAT 60.294 38.462 0.00 0.00 0.00 2.71
2317 2601 5.008613 GCCAGATTTCACTACAAACTGAACA 59.991 40.000 0.00 0.00 0.00 3.18
2318 2602 5.452777 GCCAGATTTCACTACAAACTGAAC 58.547 41.667 0.00 0.00 0.00 3.18
2337 2621 0.813184 ATCTTTGCCATCAACGCCAG 59.187 50.000 0.00 0.00 30.75 4.85
2340 2624 2.288666 TCCTATCTTTGCCATCAACGC 58.711 47.619 0.00 0.00 30.75 4.84
2357 2641 7.671398 AGGATTTCACTACAAATCAAACATCCT 59.329 33.333 7.92 0.00 42.40 3.24
2361 2645 8.918202 AGTAGGATTTCACTACAAATCAAACA 57.082 30.769 7.92 0.00 42.40 2.83
2421 2705 0.820871 GAGTTGGCTCCGACAGAGAT 59.179 55.000 8.87 0.00 46.50 2.75
2441 2725 2.278206 CGCTAGCGTCGCACATCT 60.278 61.111 28.66 0.00 34.35 2.90
2460 2744 3.629398 CAGGGAACATACAGAATTGAGGC 59.371 47.826 0.00 0.00 0.00 4.70
2580 2873 7.349598 ACTTTGTTAGGATCTTATTCCTGCAT 58.650 34.615 3.26 0.00 45.85 3.96
2631 2941 5.537188 TGAAAATTCTATGCAACCACCAAC 58.463 37.500 0.00 0.00 0.00 3.77
2640 2950 3.631686 CCGGTCCATGAAAATTCTATGCA 59.368 43.478 0.00 0.00 0.00 3.96
2653 2963 0.613260 TTTCCAGAGACCGGTCCATG 59.387 55.000 30.82 26.58 0.00 3.66
2685 2995 2.749076 TGTTCCAGCATCGGAATTTCAG 59.251 45.455 5.67 0.00 46.53 3.02
2693 3011 2.159338 CCAGAAAATGTTCCAGCATCGG 60.159 50.000 0.00 0.00 33.92 4.18
2694 3012 2.749076 TCCAGAAAATGTTCCAGCATCG 59.251 45.455 0.00 0.00 33.92 3.84
2734 3237 4.373116 CACCACCCACTCCGTCCG 62.373 72.222 0.00 0.00 0.00 4.79
2737 3240 3.556306 CACCACCACCCACTCCGT 61.556 66.667 0.00 0.00 0.00 4.69
2781 3284 3.058016 CCATCGTCTGCAGAACATTGTTT 60.058 43.478 20.19 0.00 0.00 2.83
2791 3294 0.457443 TAGTGCTCCATCGTCTGCAG 59.543 55.000 7.63 7.63 36.03 4.41
2836 3339 7.614124 TTAATTGGTAAAGTAAAGGCCGTAG 57.386 36.000 0.00 0.00 0.00 3.51
2932 3743 7.846644 TTGTTCAAACGACTTTCCTTAGTAA 57.153 32.000 0.00 0.00 0.00 2.24
2933 3744 9.715121 ATATTGTTCAAACGACTTTCCTTAGTA 57.285 29.630 0.00 0.00 0.00 1.82
2975 3786 9.162764 TGAAAGCTCTATAATAAACCAAGACAC 57.837 33.333 0.00 0.00 0.00 3.67
2976 3787 9.383519 CTGAAAGCTCTATAATAAACCAAGACA 57.616 33.333 0.00 0.00 0.00 3.41
2977 3788 9.384764 ACTGAAAGCTCTATAATAAACCAAGAC 57.615 33.333 0.00 0.00 37.60 3.01
2981 3792 8.318412 TCACACTGAAAGCTCTATAATAAACCA 58.682 33.333 0.00 0.00 37.60 3.67
2996 3879 4.201851 CCACACAGTTCTTCACACTGAAAG 60.202 45.833 7.06 0.06 43.90 2.62
3035 4002 9.921637 AACACTCTAAAAGATGAGAACTCTAAG 57.078 33.333 3.51 0.00 34.65 2.18
3056 4023 9.899661 TGCATGGAAACTACTATAATAAACACT 57.100 29.630 0.00 0.00 0.00 3.55
3143 4138 3.119388 GCATGCAACATCACCATACACTT 60.119 43.478 14.21 0.00 0.00 3.16
3155 4150 6.947644 TGAGAACATATTAGCATGCAACAT 57.052 33.333 21.98 10.79 0.00 2.71
3409 4444 5.521735 CGAACATTTAGCAGCATCTACTTCT 59.478 40.000 0.00 0.00 0.00 2.85
3563 4602 0.896923 TTTCGGCGCTAGAAAGGGTA 59.103 50.000 21.30 5.72 37.95 3.69
3644 4684 7.517614 TTGCCTTATGTATCACAACTTTGAA 57.482 32.000 0.00 0.00 0.00 2.69
3700 4740 9.577110 CATGCATTGTTGTTCTTTACATAGAAT 57.423 29.630 0.00 0.00 36.60 2.40
3848 4894 7.079182 TGGTGTACAAACCGATATCAAAATC 57.921 36.000 0.00 0.00 43.73 2.17
3860 4908 4.923281 GCAATGATCTTTGGTGTACAAACC 59.077 41.667 19.61 0.00 43.81 3.27
4035 5119 3.377485 TGACAGTTATAGCTGAGGACGAC 59.623 47.826 21.85 5.98 39.62 4.34
4239 5333 8.703604 TGTGCTTTCTACAAGTAATCAGTATC 57.296 34.615 0.00 0.00 0.00 2.24
4280 5374 5.517924 TGAATCTATCATGAGCCCCAAAAA 58.482 37.500 0.09 0.00 31.50 1.94
4395 6118 5.698832 TCCGCAATGAAACAATTAAGACAG 58.301 37.500 0.00 0.00 0.00 3.51
4565 6419 4.343239 AGAAAATCTTGCTGAGCCAAGTTT 59.657 37.500 0.23 4.79 42.16 2.66
4643 6497 5.545588 TCTACTGCAGCTGGATTATGAATC 58.454 41.667 17.12 0.00 37.17 2.52
4646 6505 6.670695 TTATCTACTGCAGCTGGATTATGA 57.329 37.500 17.12 10.73 0.00 2.15
4749 6613 6.844696 TGAACTTTGTGACTATCTGTGAAC 57.155 37.500 0.00 0.00 0.00 3.18
4861 6725 3.106827 TGTCATCTCAACTGCCATCCTA 58.893 45.455 0.00 0.00 0.00 2.94
4936 6800 6.325804 GCCTCCTTATAACTACCAAGGAAGTA 59.674 42.308 4.04 0.00 45.45 2.24
5076 6942 4.337836 TCCAAACGGGGTTTAAGTTGTTAC 59.662 41.667 0.00 0.00 33.70 2.50
5092 6958 2.936498 CAGTGTTATAGGCCTCCAAACG 59.064 50.000 9.68 0.00 0.00 3.60
5259 7128 7.649306 GCATCAAAATCAAAACACTCAACTAGT 59.351 33.333 0.00 0.00 39.81 2.57
5369 7252 8.141909 AGCCCTATTTGTCAGAAAAGTAAAAAC 58.858 33.333 0.00 0.00 0.00 2.43
5712 7595 6.201234 CACAGATGATTGACAGAGCTAATGAG 59.799 42.308 5.45 0.00 0.00 2.90
5713 7596 6.047231 CACAGATGATTGACAGAGCTAATGA 58.953 40.000 5.45 0.00 0.00 2.57
5714 7597 5.236695 CCACAGATGATTGACAGAGCTAATG 59.763 44.000 0.00 0.00 0.00 1.90
5715 7598 5.366460 CCACAGATGATTGACAGAGCTAAT 58.634 41.667 0.00 0.00 0.00 1.73
5716 7599 4.763073 CCACAGATGATTGACAGAGCTAA 58.237 43.478 0.00 0.00 0.00 3.09
5745 7628 3.504134 TGGAAACACATGGAATAACCACG 59.496 43.478 0.00 0.00 44.12 4.94
5791 7680 3.855689 ATGTAGTGCAAAGATTGTGGC 57.144 42.857 0.00 0.00 0.00 5.01
5881 7771 3.420893 TGGTCCAATAAGGCTTTCAGTG 58.579 45.455 4.45 0.00 37.29 3.66
5894 7784 4.280819 CCTGGTACATCAAATGGTCCAAT 58.719 43.478 0.00 0.00 38.20 3.16
5897 7787 2.024414 GCCTGGTACATCAAATGGTCC 58.976 52.381 0.00 0.00 38.20 4.46
5898 7788 2.722094 TGCCTGGTACATCAAATGGTC 58.278 47.619 0.00 0.00 38.20 4.02
5957 7852 2.613977 CCATGCAGGGAATCGTCTATCC 60.614 54.545 13.35 0.00 34.85 2.59
6044 7939 3.724508 AGCTATCTCACCTCACAATCG 57.275 47.619 0.00 0.00 0.00 3.34
6047 7942 3.131223 GCAGTAGCTATCTCACCTCACAA 59.869 47.826 0.00 0.00 37.91 3.33
6077 7984 9.113876 CGTCCATTGTCAAGAACTAATTAAAAC 57.886 33.333 0.00 0.00 0.00 2.43
6090 7997 6.368791 TCTTTTCAGTATCGTCCATTGTCAAG 59.631 38.462 0.00 0.00 0.00 3.02
6190 8103 9.587772 TTAATACTACTGCAAAAGCAAAACAAA 57.412 25.926 0.00 0.00 0.00 2.83
6256 8172 2.754472 GGCTGAACACAATTGGGTTTC 58.246 47.619 26.16 18.59 42.59 2.78
6297 8215 7.593273 TGCACACTAACATTTGTATTTGTAAGC 59.407 33.333 0.00 0.00 0.00 3.09
6305 8223 9.394767 TCAATATCTGCACACTAACATTTGTAT 57.605 29.630 0.00 0.00 0.00 2.29
6306 8224 8.785329 TCAATATCTGCACACTAACATTTGTA 57.215 30.769 0.00 0.00 0.00 2.41
6349 8267 5.102953 TGAGATTTATGAGTCCAACAGGG 57.897 43.478 0.00 0.00 38.37 4.45
6496 8414 2.806244 AGGAACAATTAGCACACGTCAC 59.194 45.455 0.00 0.00 0.00 3.67
6500 8432 4.481930 TTTCAGGAACAATTAGCACACG 57.518 40.909 0.00 0.00 0.00 4.49
6506 8438 6.680810 TCAGCAACATTTCAGGAACAATTAG 58.319 36.000 0.00 0.00 0.00 1.73
6606 8541 3.243401 CCCTCAGCTGGTAAACACAAAAC 60.243 47.826 15.13 0.00 0.00 2.43
6613 8548 0.960861 GGTGCCCTCAGCTGGTAAAC 60.961 60.000 15.13 6.41 44.23 2.01
6649 8588 4.507388 AGAAAATTCCGTAAACGTCAACGA 59.493 37.500 20.37 5.58 41.55 3.85
6874 8827 1.021202 TTTTGTCAACAGAGGCCACG 58.979 50.000 5.01 0.00 0.00 4.94
6878 8831 2.033424 GGTGAGTTTTGTCAACAGAGGC 59.967 50.000 0.00 0.00 34.00 4.70
6887 8840 0.586802 GTGCTCGGGTGAGTTTTGTC 59.413 55.000 0.00 0.00 44.48 3.18
7047 9003 7.360101 GGGGATGAAAGATTTATCACGTATTCG 60.360 40.741 0.00 0.00 43.34 3.34
7119 9343 1.876156 CCAGAGTCTGACAAAGCCAAC 59.124 52.381 22.09 0.00 32.44 3.77
7528 9772 2.482374 GGTACGAGTACGCGCAGT 59.518 61.111 19.25 9.29 43.96 4.40
7546 9790 2.223665 GCAGAATCTACAATTGCCAGCC 60.224 50.000 5.05 0.00 0.00 4.85
7607 9861 1.755380 ACCTAACGTGGGATGTAGAGC 59.245 52.381 13.75 0.00 0.00 4.09
7643 9901 4.277672 GTCCTAAACTGGGTGGAAAAGTTC 59.722 45.833 0.00 0.00 33.09 3.01
7659 9917 1.598407 TTTGCAGCGGCGTCCTAAA 60.598 52.632 9.37 3.13 45.35 1.85
7662 9920 4.927782 TGTTTGCAGCGGCGTCCT 62.928 61.111 9.37 0.00 45.35 3.85
7663 9921 3.477224 TTTGTTTGCAGCGGCGTCC 62.477 57.895 9.37 0.00 45.35 4.79
7666 9924 2.278466 TGTTTGTTTGCAGCGGCG 60.278 55.556 0.51 0.51 45.35 6.46
7667 9925 0.030101 TAGTGTTTGTTTGCAGCGGC 59.970 50.000 0.31 0.31 41.68 6.53
7668 9926 1.753956 GTAGTGTTTGTTTGCAGCGG 58.246 50.000 0.00 0.00 0.00 5.52
7669 9927 1.267832 ACGTAGTGTTTGTTTGCAGCG 60.268 47.619 0.00 0.00 42.51 5.18
7671 9929 4.212425 TCCATACGTAGTGTTTGTTTGCAG 59.788 41.667 0.08 0.00 45.73 4.41
7672 9930 4.127907 TCCATACGTAGTGTTTGTTTGCA 58.872 39.130 0.08 0.00 45.73 4.08
7673 9931 4.735662 TCCATACGTAGTGTTTGTTTGC 57.264 40.909 0.08 0.00 45.73 3.68
7674 9932 7.858382 TCATTTTCCATACGTAGTGTTTGTTTG 59.142 33.333 0.08 0.00 45.73 2.93
7675 9933 7.932335 TCATTTTCCATACGTAGTGTTTGTTT 58.068 30.769 0.08 0.00 45.73 2.83
7676 9934 7.442969 TCTCATTTTCCATACGTAGTGTTTGTT 59.557 33.333 0.08 0.00 45.73 2.83
7677 9935 6.932400 TCTCATTTTCCATACGTAGTGTTTGT 59.068 34.615 0.08 0.00 45.73 2.83
7693 9951 5.686397 CCGAGAAGGTACGTATCTCATTTTC 59.314 44.000 19.52 9.98 39.62 2.29
7710 9975 1.063806 CAGTGCGAAGAACCGAGAAG 58.936 55.000 0.00 0.00 0.00 2.85
7711 9976 0.671796 TCAGTGCGAAGAACCGAGAA 59.328 50.000 0.00 0.00 0.00 2.87
7713 9978 0.784778 GTTCAGTGCGAAGAACCGAG 59.215 55.000 4.23 0.00 38.49 4.63
7715 9980 0.508641 CAGTTCAGTGCGAAGAACCG 59.491 55.000 10.24 0.00 43.89 4.44
7783 10064 1.021390 CAGTGACAAGATGGGTCGCC 61.021 60.000 0.00 0.00 44.69 5.54
7784 10065 0.320771 ACAGTGACAAGATGGGTCGC 60.321 55.000 0.00 0.00 44.11 5.19
7785 10066 1.270305 ACACAGTGACAAGATGGGTCG 60.270 52.381 7.81 0.00 38.10 4.79
7786 10067 2.550830 ACACAGTGACAAGATGGGTC 57.449 50.000 7.81 0.00 35.83 4.46
7787 10068 2.703536 TGTACACAGTGACAAGATGGGT 59.296 45.455 7.81 0.00 34.32 4.51
7817 10098 6.957150 ACGATAACAACGATAAACAAAACCA 58.043 32.000 0.00 0.00 34.70 3.67
7917 10206 3.848272 AACAAATGTGATACCAAGCCG 57.152 42.857 0.00 0.00 0.00 5.52
7955 10244 5.529060 CCACCTATTTATTCAACAGGAGAGC 59.471 44.000 0.00 0.00 0.00 4.09
7965 10260 9.627123 CTAATTTCAGTCCCACCTATTTATTCA 57.373 33.333 0.00 0.00 0.00 2.57
7977 10272 4.941263 CGGAATTGACTAATTTCAGTCCCA 59.059 41.667 6.02 0.00 43.63 4.37
8005 10344 1.822371 GCACCGAAATGGGGTATGTTT 59.178 47.619 0.00 0.00 46.09 2.83
8016 10355 2.813908 GACTCGCGGCACCGAAAT 60.814 61.111 14.43 0.00 42.83 2.17
8029 10368 1.135344 GTCCTAGCGTGAGTTGGACTC 60.135 57.143 0.00 1.21 45.26 3.36
8041 10380 1.040339 AGAGAGGCCAAGTCCTAGCG 61.040 60.000 5.01 0.00 36.38 4.26
8051 10390 1.142060 TCAAAACCGAAAGAGAGGCCA 59.858 47.619 5.01 0.00 0.00 5.36
8052 10391 1.892209 TCAAAACCGAAAGAGAGGCC 58.108 50.000 0.00 0.00 0.00 5.19
8070 10409 2.608752 CCTTGCTTGTGCTTGGTCATTC 60.609 50.000 0.00 0.00 40.48 2.67
8111 10465 3.009363 CCTAGGGTTTTTCGTAAGGGGAA 59.991 47.826 0.00 0.00 38.47 3.97
8112 10466 2.573009 CCTAGGGTTTTTCGTAAGGGGA 59.427 50.000 0.00 0.00 38.47 4.81
8119 10473 0.036671 CTCGCCCTAGGGTTTTTCGT 60.037 55.000 28.96 0.00 37.65 3.85
8127 10481 3.996124 CATCGCCTCGCCCTAGGG 61.996 72.222 24.89 24.89 37.11 3.53
8165 10519 0.958822 AAAGGGGCTTTGCTGTAACG 59.041 50.000 0.00 0.00 31.98 3.18
8225 10579 8.710239 ACCACAATACGATATAATGGCCATATA 58.290 33.333 21.15 16.40 0.00 0.86
8227 10581 6.953101 ACCACAATACGATATAATGGCCATA 58.047 36.000 21.15 3.31 0.00 2.74
8301 10663 1.463528 GCGCATACGTGGTTTTGAGTC 60.464 52.381 0.30 0.00 42.83 3.36
8304 10666 1.579084 GGGCGCATACGTGGTTTTGA 61.579 55.000 10.83 0.00 42.83 2.69
8309 10671 4.807039 GACGGGCGCATACGTGGT 62.807 66.667 24.71 5.00 44.24 4.16
8332 10697 1.173913 GTATGAAAAGGGCGCTTGGT 58.826 50.000 17.66 8.24 0.00 3.67
8347 10732 1.382522 ACCAATGCAAGCCGAGTATG 58.617 50.000 0.00 0.00 0.00 2.39
8362 10747 1.214589 GCGACTCGGCTTCTACCAA 59.785 57.895 0.00 0.00 0.00 3.67
8379 10764 1.338655 GGTAGAAGATGAGTCTCCCGC 59.661 57.143 0.00 0.00 32.15 6.13
8380 10765 1.604755 CGGTAGAAGATGAGTCTCCCG 59.395 57.143 0.00 0.00 32.15 5.14
8381 10766 1.957877 CCGGTAGAAGATGAGTCTCCC 59.042 57.143 0.00 0.00 32.15 4.30
8383 10768 2.223618 GCACCGGTAGAAGATGAGTCTC 60.224 54.545 6.87 0.00 32.15 3.36
8385 10770 1.476891 TGCACCGGTAGAAGATGAGTC 59.523 52.381 6.87 0.00 0.00 3.36
8390 10783 0.107654 GGCTTGCACCGGTAGAAGAT 60.108 55.000 22.91 0.00 0.00 2.40
8391 10784 1.295423 GGCTTGCACCGGTAGAAGA 59.705 57.895 22.91 2.77 0.00 2.87
8400 10793 2.095372 GTGTTTATACTCGGCTTGCACC 59.905 50.000 0.00 0.00 0.00 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.