Multiple sequence alignment - TraesCS6B01G074200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G074200 chr6B 100.000 4543 0 0 1 4543 51005619 51010161 0.000000e+00 8390.0
1 TraesCS6B01G074200 chr6B 96.568 641 21 1 3797 4436 21063413 21064053 0.000000e+00 1061.0
2 TraesCS6B01G074200 chr6D 91.649 2826 115 37 427 3185 27462798 27460027 0.000000e+00 3799.0
3 TraesCS6B01G074200 chr6D 94.093 237 12 2 49 285 27463024 27462790 4.320000e-95 359.0
4 TraesCS6B01G074200 chr6D 91.797 256 13 2 3333 3580 27459516 27459261 2.600000e-92 350.0
5 TraesCS6B01G074200 chr6D 97.297 37 1 0 3176 3212 27459690 27459654 3.790000e-06 63.9
6 TraesCS6B01G074200 chr6A 92.380 1798 80 27 1414 3185 30798038 30796272 0.000000e+00 2508.0
7 TraesCS6B01G074200 chr6A 92.092 607 25 7 819 1411 30798708 30798111 0.000000e+00 833.0
8 TraesCS6B01G074200 chr6A 91.200 250 13 3 3340 3580 30796071 30795822 9.420000e-87 331.0
9 TraesCS6B01G074200 chr6A 93.750 160 9 1 126 285 30800128 30799970 5.870000e-59 239.0
10 TraesCS6B01G074200 chr6A 97.710 131 3 0 287 417 420380478 420380348 4.570000e-55 226.0
11 TraesCS6B01G074200 chr6A 91.453 117 5 3 490 604 30799732 30799619 6.090000e-34 156.0
12 TraesCS6B01G074200 chr6A 93.182 44 2 1 3176 3218 30796231 30796188 3.790000e-06 63.9
13 TraesCS6B01G074200 chr1B 97.488 637 16 0 3797 4433 644278208 644278844 0.000000e+00 1088.0
14 TraesCS6B01G074200 chr1B 97.045 643 19 0 3797 4439 269218895 269218253 0.000000e+00 1083.0
15 TraesCS6B01G074200 chr1B 96.546 637 21 1 3797 4433 390272488 390273123 0.000000e+00 1053.0
16 TraesCS6B01G074200 chr2B 96.855 636 19 1 3802 4437 156588822 156589456 0.000000e+00 1062.0
17 TraesCS6B01G074200 chr2B 96.389 637 23 0 3797 4433 40323753 40324389 0.000000e+00 1050.0
18 TraesCS6B01G074200 chr2B 85.955 178 19 6 3581 3753 768373749 768373573 7.760000e-43 185.0
19 TraesCS6B01G074200 chr5B 96.546 637 21 1 3797 4433 141947086 141947721 0.000000e+00 1053.0
20 TraesCS6B01G074200 chr5B 97.710 131 3 0 287 417 587112953 587113083 4.570000e-55 226.0
21 TraesCS6B01G074200 chr5B 87.791 172 16 4 3587 3753 139357819 139357648 3.590000e-46 196.0
22 TraesCS6B01G074200 chr4B 96.406 640 21 2 3797 4436 174042066 174041429 0.000000e+00 1053.0
23 TraesCS6B01G074200 chr4B 96.389 637 23 0 3797 4433 629957298 629957934 0.000000e+00 1050.0
24 TraesCS6B01G074200 chr7A 95.210 167 7 1 3415 3580 652986800 652986634 3.490000e-66 263.0
25 TraesCS6B01G074200 chr7A 97.744 133 3 0 285 417 19063778 19063646 3.540000e-56 230.0
26 TraesCS6B01G074200 chr7A 97.710 131 3 0 287 417 684119632 684119762 4.570000e-55 226.0
27 TraesCS6B01G074200 chr7A 86.592 179 15 9 3581 3752 43179271 43179447 6.000000e-44 189.0
28 TraesCS6B01G074200 chr7A 85.165 182 20 5 3577 3753 469362239 469362418 3.610000e-41 180.0
29 TraesCS6B01G074200 chr3A 97.710 131 3 0 287 417 659009221 659009091 4.570000e-55 226.0
30 TraesCS6B01G074200 chr3A 85.556 180 21 5 3579 3753 127914952 127915131 2.790000e-42 183.0
31 TraesCS6B01G074200 chr2D 97.710 131 3 0 287 417 22219890 22219760 4.570000e-55 226.0
32 TraesCS6B01G074200 chr2A 97.710 131 3 0 287 417 758098521 758098391 4.570000e-55 226.0
33 TraesCS6B01G074200 chr2A 96.183 131 5 0 287 417 641964143 641964013 9.900000e-52 215.0
34 TraesCS6B01G074200 chr2A 88.166 169 15 3 3590 3753 54824810 54824642 3.590000e-46 196.0
35 TraesCS6B01G074200 chr2A 85.955 178 18 5 3581 3753 456291113 456291288 2.790000e-42 183.0
36 TraesCS6B01G074200 chr5D 96.947 131 4 0 287 417 379229841 379229971 2.130000e-53 220.0
37 TraesCS6B01G074200 chr4A 78.223 349 72 3 2820 3166 700734867 700734521 2.130000e-53 220.0
38 TraesCS6B01G074200 chr4A 96.774 31 1 0 2681 2711 139546803 139546833 8.000000e-03 52.8
39 TraesCS6B01G074200 chr5A 85.393 178 19 5 3581 3753 19912670 19912495 1.300000e-40 178.0
40 TraesCS6B01G074200 chr1A 85.311 177 21 5 3581 3753 41911777 41911602 1.300000e-40 178.0
41 TraesCS6B01G074200 chr1A 70.769 325 85 9 2835 3154 105304169 105304488 1.050000e-06 65.8
42 TraesCS6B01G074200 chr7D 84.153 183 16 6 424 606 8848141 8848310 1.010000e-36 165.0
43 TraesCS6B01G074200 chr7D 97.917 48 1 0 3749 3796 488071694 488071741 2.910000e-12 84.2
44 TraesCS6B01G074200 chr7D 86.486 74 8 1 4434 4507 617060455 617060384 3.770000e-11 80.5
45 TraesCS6B01G074200 chr7D 100.000 28 0 0 1069 1096 521733663 521733636 8.000000e-03 52.8
46 TraesCS6B01G074200 chr1D 76.426 263 49 6 1469 1720 12419063 12419323 3.690000e-26 130.0
47 TraesCS6B01G074200 chr1D 88.889 63 7 0 4431 4493 53162349 53162411 1.360000e-10 78.7
48 TraesCS6B01G074200 chr1D 97.297 37 1 0 3235 3271 14632465 14632501 3.790000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G074200 chr6B 51005619 51010161 4542 False 8390.000000 8390 100.000000 1 4543 1 chr6B.!!$F2 4542
1 TraesCS6B01G074200 chr6B 21063413 21064053 640 False 1061.000000 1061 96.568000 3797 4436 1 chr6B.!!$F1 639
2 TraesCS6B01G074200 chr6D 27459261 27463024 3763 True 1142.975000 3799 93.709000 49 3580 4 chr6D.!!$R1 3531
3 TraesCS6B01G074200 chr6A 30795822 30800128 4306 True 688.483333 2508 92.342833 126 3580 6 chr6A.!!$R2 3454
4 TraesCS6B01G074200 chr1B 644278208 644278844 636 False 1088.000000 1088 97.488000 3797 4433 1 chr1B.!!$F2 636
5 TraesCS6B01G074200 chr1B 269218253 269218895 642 True 1083.000000 1083 97.045000 3797 4439 1 chr1B.!!$R1 642
6 TraesCS6B01G074200 chr1B 390272488 390273123 635 False 1053.000000 1053 96.546000 3797 4433 1 chr1B.!!$F1 636
7 TraesCS6B01G074200 chr2B 156588822 156589456 634 False 1062.000000 1062 96.855000 3802 4437 1 chr2B.!!$F2 635
8 TraesCS6B01G074200 chr2B 40323753 40324389 636 False 1050.000000 1050 96.389000 3797 4433 1 chr2B.!!$F1 636
9 TraesCS6B01G074200 chr5B 141947086 141947721 635 False 1053.000000 1053 96.546000 3797 4433 1 chr5B.!!$F1 636
10 TraesCS6B01G074200 chr4B 174041429 174042066 637 True 1053.000000 1053 96.406000 3797 4436 1 chr4B.!!$R1 639
11 TraesCS6B01G074200 chr4B 629957298 629957934 636 False 1050.000000 1050 96.389000 3797 4433 1 chr4B.!!$F1 636

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
306 307 0.036105 AATGCTGTGCAGACGATGGA 60.036 50.000 3.02 0.00 43.65 3.41 F
337 338 0.036732 ACAGTTGGACGATGCCACAT 59.963 50.000 0.00 0.00 37.75 3.21 F
387 388 0.107993 ATGGACGACCTGATGTGCAG 60.108 55.000 5.33 0.00 39.82 4.41 F
1144 2061 0.247814 CGAGCAATGCGTGACAATCC 60.248 55.000 0.00 0.00 0.00 3.01 F
2134 3165 0.322546 GGGTCGTGGAAGATGGCTTT 60.323 55.000 0.00 0.00 33.61 3.51 F
2362 3393 0.737219 AGTACTACATGGTCGCCGTC 59.263 55.000 0.00 0.00 0.00 4.79 F
2400 3431 1.832608 CCGACATCCAGATCCCGGA 60.833 63.158 0.73 4.03 35.88 5.14 F
3376 4822 1.055040 TGCAAGTTTTTCCCATGGGG 58.945 50.000 30.93 12.85 46.11 4.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1386 2311 0.320050 TATGCGTGCAGTTCACTGGA 59.680 50.000 9.01 2.88 43.94 3.86 R
1466 2482 1.162181 ATCCGTGCCTTCATGCATCG 61.162 55.000 0.00 0.00 44.30 3.84 R
2341 3372 1.133790 ACGGCGACCATGTAGTACTTC 59.866 52.381 16.62 0.00 0.00 3.01 R
2573 3604 1.067283 CAGGCTCTCATCAACAGTCGT 60.067 52.381 0.00 0.00 0.00 4.34 R
2968 3999 1.086696 GGTTGTCGGTGTCCATCATG 58.913 55.000 0.00 0.00 0.00 3.07 R
3269 4646 1.344763 AGACTTCCTGTGTTTCCCTCG 59.655 52.381 0.00 0.00 0.00 4.63 R
3506 4960 2.007608 GGAAAATCTACAGGCGGTGAC 58.992 52.381 0.00 0.00 0.00 3.67 R
4462 5917 0.390603 CCCCACGCGTTATTGTGAGA 60.391 55.000 10.22 0.00 38.36 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.271800 GTTAGGTGATCTTCAGTGGCG 58.728 52.381 0.00 0.00 0.00 5.69
21 22 0.175760 TAGGTGATCTTCAGTGGCGC 59.824 55.000 0.00 0.00 0.00 6.53
22 23 2.109126 GGTGATCTTCAGTGGCGCC 61.109 63.158 22.73 22.73 0.00 6.53
23 24 1.375908 GTGATCTTCAGTGGCGCCA 60.376 57.895 29.03 29.03 0.00 5.69
24 25 0.955428 GTGATCTTCAGTGGCGCCAA 60.955 55.000 34.66 15.97 0.00 4.52
25 26 0.955428 TGATCTTCAGTGGCGCCAAC 60.955 55.000 34.66 24.65 0.00 3.77
26 27 1.648467 GATCTTCAGTGGCGCCAACC 61.648 60.000 34.66 20.89 0.00 3.77
27 28 2.129555 ATCTTCAGTGGCGCCAACCT 62.130 55.000 34.66 23.13 0.00 3.50
28 29 1.898574 CTTCAGTGGCGCCAACCTT 60.899 57.895 34.66 14.72 0.00 3.50
29 30 2.133742 CTTCAGTGGCGCCAACCTTG 62.134 60.000 34.66 25.31 0.00 3.61
30 31 4.347453 CAGTGGCGCCAACCTTGC 62.347 66.667 34.66 18.31 0.00 4.01
31 32 4.892965 AGTGGCGCCAACCTTGCA 62.893 61.111 34.66 1.55 0.00 4.08
32 33 3.683937 GTGGCGCCAACCTTGCAT 61.684 61.111 34.66 0.00 0.00 3.96
33 34 2.034843 TGGCGCCAACCTTGCATA 59.965 55.556 30.74 0.00 0.00 3.14
34 35 2.045708 TGGCGCCAACCTTGCATAG 61.046 57.895 30.74 0.00 0.00 2.23
35 36 2.046285 GGCGCCAACCTTGCATAGT 61.046 57.895 24.80 0.00 0.00 2.12
36 37 1.595093 GGCGCCAACCTTGCATAGTT 61.595 55.000 24.80 0.00 0.00 2.24
37 38 0.243636 GCGCCAACCTTGCATAGTTT 59.756 50.000 0.00 0.00 0.00 2.66
38 39 1.732405 GCGCCAACCTTGCATAGTTTC 60.732 52.381 0.00 0.00 0.00 2.78
39 40 1.812571 CGCCAACCTTGCATAGTTTCT 59.187 47.619 0.00 0.00 0.00 2.52
40 41 2.159517 CGCCAACCTTGCATAGTTTCTC 60.160 50.000 0.00 0.00 0.00 2.87
41 42 2.164422 GCCAACCTTGCATAGTTTCTCC 59.836 50.000 0.00 0.00 0.00 3.71
42 43 3.690460 CCAACCTTGCATAGTTTCTCCT 58.310 45.455 0.00 0.00 0.00 3.69
43 44 4.082125 CCAACCTTGCATAGTTTCTCCTT 58.918 43.478 0.00 0.00 0.00 3.36
44 45 4.156739 CCAACCTTGCATAGTTTCTCCTTC 59.843 45.833 0.00 0.00 0.00 3.46
45 46 3.600388 ACCTTGCATAGTTTCTCCTTCG 58.400 45.455 0.00 0.00 0.00 3.79
46 47 3.260884 ACCTTGCATAGTTTCTCCTTCGA 59.739 43.478 0.00 0.00 0.00 3.71
47 48 4.253685 CCTTGCATAGTTTCTCCTTCGAA 58.746 43.478 0.00 0.00 0.00 3.71
48 49 4.878397 CCTTGCATAGTTTCTCCTTCGAAT 59.122 41.667 0.00 0.00 0.00 3.34
49 50 5.355350 CCTTGCATAGTTTCTCCTTCGAATT 59.645 40.000 0.00 0.00 0.00 2.17
50 51 6.127897 CCTTGCATAGTTTCTCCTTCGAATTT 60.128 38.462 0.00 0.00 0.00 1.82
51 52 6.422776 TGCATAGTTTCTCCTTCGAATTTC 57.577 37.500 0.00 0.00 0.00 2.17
52 53 6.173339 TGCATAGTTTCTCCTTCGAATTTCT 58.827 36.000 0.00 0.00 0.00 2.52
53 54 6.092670 TGCATAGTTTCTCCTTCGAATTTCTG 59.907 38.462 0.00 0.00 0.00 3.02
59 60 4.828829 TCTCCTTCGAATTTCTGGGTAAC 58.171 43.478 0.00 0.00 0.00 2.50
120 121 0.386476 AGTGCACGAACCTCAACGTA 59.614 50.000 12.01 0.00 40.76 3.57
170 171 4.373116 TGCTCCCGCACGAACCTC 62.373 66.667 0.00 0.00 42.25 3.85
191 192 6.147328 ACCTCGAATTTACAGTAGTTCTTTGC 59.853 38.462 0.00 0.00 0.00 3.68
283 284 2.420058 CCGGAGGCTTTAACCAGATT 57.580 50.000 0.00 0.00 46.14 2.40
284 285 2.017049 CCGGAGGCTTTAACCAGATTG 58.983 52.381 0.00 0.00 46.14 2.67
285 286 2.355716 CCGGAGGCTTTAACCAGATTGA 60.356 50.000 0.00 0.00 46.14 2.57
286 287 3.343617 CGGAGGCTTTAACCAGATTGAA 58.656 45.455 0.00 0.00 0.00 2.69
287 288 3.756434 CGGAGGCTTTAACCAGATTGAAA 59.244 43.478 0.00 0.00 0.00 2.69
288 289 4.217550 CGGAGGCTTTAACCAGATTGAAAA 59.782 41.667 0.00 0.00 0.00 2.29
289 290 5.105756 CGGAGGCTTTAACCAGATTGAAAAT 60.106 40.000 0.00 0.00 0.00 1.82
290 291 6.101997 GGAGGCTTTAACCAGATTGAAAATG 58.898 40.000 0.00 0.00 0.00 2.32
291 292 5.482006 AGGCTTTAACCAGATTGAAAATGC 58.518 37.500 0.00 0.00 0.00 3.56
292 293 5.246883 AGGCTTTAACCAGATTGAAAATGCT 59.753 36.000 0.00 0.00 0.00 3.79
293 294 5.349543 GGCTTTAACCAGATTGAAAATGCTG 59.650 40.000 0.00 0.00 0.00 4.41
294 295 5.928264 GCTTTAACCAGATTGAAAATGCTGT 59.072 36.000 0.00 0.00 0.00 4.40
295 296 6.128742 GCTTTAACCAGATTGAAAATGCTGTG 60.129 38.462 0.00 0.00 0.00 3.66
296 297 3.308438 ACCAGATTGAAAATGCTGTGC 57.692 42.857 0.00 0.00 0.00 4.57
297 298 2.629137 ACCAGATTGAAAATGCTGTGCA 59.371 40.909 0.00 0.00 44.86 4.57
298 299 3.250744 CCAGATTGAAAATGCTGTGCAG 58.749 45.455 0.00 0.00 43.65 4.41
299 300 3.057104 CCAGATTGAAAATGCTGTGCAGA 60.057 43.478 3.02 0.00 43.65 4.26
300 301 3.918591 CAGATTGAAAATGCTGTGCAGAC 59.081 43.478 3.02 0.00 43.65 3.51
301 302 2.404265 TTGAAAATGCTGTGCAGACG 57.596 45.000 3.02 0.00 43.65 4.18
302 303 1.592064 TGAAAATGCTGTGCAGACGA 58.408 45.000 3.02 0.00 43.65 4.20
303 304 2.153645 TGAAAATGCTGTGCAGACGAT 58.846 42.857 3.02 0.00 43.65 3.73
304 305 2.095617 TGAAAATGCTGTGCAGACGATG 60.096 45.455 3.02 0.00 43.65 3.84
305 306 0.806868 AAATGCTGTGCAGACGATGG 59.193 50.000 3.02 0.00 43.65 3.51
306 307 0.036105 AATGCTGTGCAGACGATGGA 60.036 50.000 3.02 0.00 43.65 3.41
307 308 0.179702 ATGCTGTGCAGACGATGGAT 59.820 50.000 3.02 0.00 43.65 3.41
308 309 0.460811 TGCTGTGCAGACGATGGATC 60.461 55.000 3.02 0.00 33.32 3.36
309 310 0.179089 GCTGTGCAGACGATGGATCT 60.179 55.000 3.02 0.00 0.00 2.75
310 311 1.067669 GCTGTGCAGACGATGGATCTA 59.932 52.381 3.02 0.00 0.00 1.98
311 312 2.288702 GCTGTGCAGACGATGGATCTAT 60.289 50.000 3.02 0.00 0.00 1.98
312 313 3.573598 CTGTGCAGACGATGGATCTATC 58.426 50.000 8.95 8.95 0.00 2.08
319 320 1.607713 CGATGGATCTATCGCACGAC 58.392 55.000 25.55 0.00 42.74 4.34
320 321 1.069227 CGATGGATCTATCGCACGACA 60.069 52.381 25.55 0.00 42.74 4.35
321 322 2.590073 GATGGATCTATCGCACGACAG 58.410 52.381 3.03 0.00 0.00 3.51
322 323 1.389555 TGGATCTATCGCACGACAGT 58.610 50.000 0.00 0.00 0.00 3.55
323 324 1.749063 TGGATCTATCGCACGACAGTT 59.251 47.619 0.00 0.00 0.00 3.16
324 325 2.120232 GGATCTATCGCACGACAGTTG 58.880 52.381 0.00 0.00 0.00 3.16
325 326 2.120232 GATCTATCGCACGACAGTTGG 58.880 52.381 0.00 0.00 0.00 3.77
326 327 1.170442 TCTATCGCACGACAGTTGGA 58.830 50.000 0.00 0.00 0.00 3.53
327 328 1.135489 TCTATCGCACGACAGTTGGAC 60.135 52.381 0.00 0.00 0.00 4.02
328 329 0.455464 TATCGCACGACAGTTGGACG 60.455 55.000 0.00 0.00 0.00 4.79
329 330 2.137425 ATCGCACGACAGTTGGACGA 62.137 55.000 9.21 9.21 0.00 4.20
330 331 1.733041 CGCACGACAGTTGGACGAT 60.733 57.895 0.00 0.00 0.00 3.73
331 332 1.781555 GCACGACAGTTGGACGATG 59.218 57.895 0.00 0.00 0.00 3.84
332 333 1.781555 CACGACAGTTGGACGATGC 59.218 57.895 0.00 0.00 0.00 3.91
333 334 1.374252 ACGACAGTTGGACGATGCC 60.374 57.895 0.00 0.00 0.00 4.40
334 335 1.374125 CGACAGTTGGACGATGCCA 60.374 57.895 0.00 0.00 35.78 4.92
335 336 1.626654 CGACAGTTGGACGATGCCAC 61.627 60.000 0.00 0.00 37.75 5.01
336 337 0.602638 GACAGTTGGACGATGCCACA 60.603 55.000 0.00 0.00 37.75 4.17
337 338 0.036732 ACAGTTGGACGATGCCACAT 59.963 50.000 0.00 0.00 37.75 3.21
338 339 0.729116 CAGTTGGACGATGCCACATC 59.271 55.000 0.00 0.00 37.75 3.06
339 340 0.392998 AGTTGGACGATGCCACATCC 60.393 55.000 2.15 0.00 37.75 3.51
340 341 0.676466 GTTGGACGATGCCACATCCA 60.676 55.000 2.15 0.00 39.50 3.41
341 342 0.392863 TTGGACGATGCCACATCCAG 60.393 55.000 2.15 0.00 42.12 3.86
342 343 2.182842 GGACGATGCCACATCCAGC 61.183 63.158 2.15 0.00 0.00 4.85
343 344 2.124570 ACGATGCCACATCCAGCC 60.125 61.111 2.15 0.00 0.00 4.85
344 345 3.274586 CGATGCCACATCCAGCCG 61.275 66.667 2.15 0.00 0.00 5.52
345 346 2.124570 GATGCCACATCCAGCCGT 60.125 61.111 0.00 0.00 0.00 5.68
346 347 1.750399 GATGCCACATCCAGCCGTT 60.750 57.895 0.00 0.00 0.00 4.44
347 348 1.718757 GATGCCACATCCAGCCGTTC 61.719 60.000 0.00 0.00 0.00 3.95
348 349 2.359850 GCCACATCCAGCCGTTCA 60.360 61.111 0.00 0.00 0.00 3.18
349 350 2.690778 GCCACATCCAGCCGTTCAC 61.691 63.158 0.00 0.00 0.00 3.18
350 351 1.003355 CCACATCCAGCCGTTCACT 60.003 57.895 0.00 0.00 0.00 3.41
351 352 1.300971 CCACATCCAGCCGTTCACTG 61.301 60.000 0.00 0.00 34.82 3.66
356 357 4.779475 CAGCCGTTCACTGGACTT 57.221 55.556 0.00 0.00 0.00 3.01
357 358 2.533318 CAGCCGTTCACTGGACTTC 58.467 57.895 0.00 0.00 0.00 3.01
358 359 1.006102 AGCCGTTCACTGGACTTCG 60.006 57.895 0.00 0.00 0.00 3.79
359 360 1.006571 GCCGTTCACTGGACTTCGA 60.007 57.895 0.00 0.00 0.00 3.71
360 361 0.389948 GCCGTTCACTGGACTTCGAT 60.390 55.000 0.00 0.00 0.00 3.59
361 362 1.350193 CCGTTCACTGGACTTCGATG 58.650 55.000 0.00 0.00 0.00 3.84
362 363 1.067846 CCGTTCACTGGACTTCGATGA 60.068 52.381 5.16 0.00 0.00 2.92
363 364 2.417379 CCGTTCACTGGACTTCGATGAT 60.417 50.000 5.16 0.00 0.00 2.45
364 365 3.181490 CCGTTCACTGGACTTCGATGATA 60.181 47.826 5.16 0.00 0.00 2.15
365 366 4.499865 CCGTTCACTGGACTTCGATGATAT 60.500 45.833 5.16 0.00 0.00 1.63
366 367 4.442403 CGTTCACTGGACTTCGATGATATG 59.558 45.833 5.16 0.00 0.00 1.78
367 368 5.352284 GTTCACTGGACTTCGATGATATGT 58.648 41.667 5.16 0.00 0.00 2.29
368 369 6.504398 GTTCACTGGACTTCGATGATATGTA 58.496 40.000 5.16 0.00 0.00 2.29
369 370 6.901081 TCACTGGACTTCGATGATATGTAT 57.099 37.500 5.16 0.00 0.00 2.29
370 371 6.681777 TCACTGGACTTCGATGATATGTATG 58.318 40.000 5.16 0.00 0.00 2.39
371 372 5.866092 CACTGGACTTCGATGATATGTATGG 59.134 44.000 5.16 0.00 0.00 2.74
372 373 5.775195 ACTGGACTTCGATGATATGTATGGA 59.225 40.000 5.16 0.00 0.00 3.41
373 374 6.025749 TGGACTTCGATGATATGTATGGAC 57.974 41.667 5.16 0.00 0.00 4.02
374 375 5.096169 GGACTTCGATGATATGTATGGACG 58.904 45.833 5.16 0.00 0.00 4.79
375 376 5.106277 GGACTTCGATGATATGTATGGACGA 60.106 44.000 5.16 0.00 0.00 4.20
376 377 5.700846 ACTTCGATGATATGTATGGACGAC 58.299 41.667 5.16 0.00 0.00 4.34
377 378 4.696899 TCGATGATATGTATGGACGACC 57.303 45.455 0.00 0.00 0.00 4.79
378 379 4.332828 TCGATGATATGTATGGACGACCT 58.667 43.478 5.33 0.00 37.04 3.85
379 380 4.156008 TCGATGATATGTATGGACGACCTG 59.844 45.833 5.33 0.00 37.04 4.00
380 381 4.156008 CGATGATATGTATGGACGACCTGA 59.844 45.833 5.33 0.00 37.04 3.86
381 382 5.163612 CGATGATATGTATGGACGACCTGAT 60.164 44.000 5.33 0.00 37.04 2.90
382 383 5.391312 TGATATGTATGGACGACCTGATG 57.609 43.478 5.33 0.00 37.04 3.07
383 384 4.832823 TGATATGTATGGACGACCTGATGT 59.167 41.667 5.33 0.00 37.04 3.06
384 385 2.959507 TGTATGGACGACCTGATGTG 57.040 50.000 5.33 0.00 37.04 3.21
385 386 1.134818 TGTATGGACGACCTGATGTGC 60.135 52.381 5.33 0.00 37.04 4.57
386 387 1.134818 GTATGGACGACCTGATGTGCA 60.135 52.381 5.33 0.00 40.75 4.57
387 388 0.107993 ATGGACGACCTGATGTGCAG 60.108 55.000 5.33 0.00 39.82 4.41
388 389 2.103042 GGACGACCTGATGTGCAGC 61.103 63.158 0.00 0.00 43.50 5.25
389 390 2.433145 ACGACCTGATGTGCAGCG 60.433 61.111 0.00 0.00 43.50 5.18
390 391 2.433145 CGACCTGATGTGCAGCGT 60.433 61.111 0.00 0.00 43.50 5.07
391 392 2.447887 CGACCTGATGTGCAGCGTC 61.448 63.158 0.00 0.00 43.50 5.19
392 393 2.433145 ACCTGATGTGCAGCGTCG 60.433 61.111 0.00 0.00 43.50 5.12
393 394 2.433145 CCTGATGTGCAGCGTCGT 60.433 61.111 0.00 0.00 43.50 4.34
394 395 2.733671 CCTGATGTGCAGCGTCGTG 61.734 63.158 0.00 0.00 43.50 4.35
395 396 3.358667 CTGATGTGCAGCGTCGTGC 62.359 63.158 11.34 11.34 44.27 5.34
404 405 2.549282 GCGTCGTGCACAAATCGT 59.451 55.556 18.64 0.00 45.45 3.73
405 406 1.083015 GCGTCGTGCACAAATCGTT 60.083 52.632 18.64 0.00 45.45 3.85
406 407 1.052768 GCGTCGTGCACAAATCGTTC 61.053 55.000 18.64 0.60 45.45 3.95
407 408 0.780637 CGTCGTGCACAAATCGTTCG 60.781 55.000 18.64 8.32 0.00 3.95
408 409 1.052768 GTCGTGCACAAATCGTTCGC 61.053 55.000 18.64 0.00 0.00 4.70
409 410 2.131407 CGTGCACAAATCGTTCGCG 61.131 57.895 18.64 0.00 38.34 5.87
410 411 2.127421 TGCACAAATCGTTCGCGC 60.127 55.556 0.00 0.00 41.05 6.86
411 412 2.127421 GCACAAATCGTTCGCGCA 60.127 55.556 8.75 0.00 41.05 6.09
412 413 1.511887 GCACAAATCGTTCGCGCAT 60.512 52.632 8.75 0.00 41.05 4.73
413 414 1.455908 GCACAAATCGTTCGCGCATC 61.456 55.000 8.75 0.00 41.05 3.91
414 415 1.058748 ACAAATCGTTCGCGCATCG 59.941 52.632 8.75 8.94 41.05 3.84
415 416 1.058748 CAAATCGTTCGCGCATCGT 59.941 52.632 8.75 0.00 41.05 3.73
416 417 0.914996 CAAATCGTTCGCGCATCGTC 60.915 55.000 8.75 0.00 41.05 4.20
417 418 1.348538 AAATCGTTCGCGCATCGTCA 61.349 50.000 8.75 0.00 41.05 4.35
418 419 1.742900 AATCGTTCGCGCATCGTCAG 61.743 55.000 8.75 0.00 41.05 3.51
419 420 4.543736 CGTTCGCGCATCGTCAGC 62.544 66.667 8.75 0.00 39.67 4.26
426 427 4.402192 GCATCGTCAGCGCTCTAA 57.598 55.556 7.13 0.00 38.14 2.10
442 630 3.620966 GCTCTAACCAGATTGGCTTGTCT 60.621 47.826 0.00 0.00 42.67 3.41
472 664 5.642063 AGGCAAAGAAATTTTCATGCATCAG 59.358 36.000 26.94 0.00 42.76 2.90
489 681 1.804326 AGCGAACACGTATGCGGTC 60.804 57.895 8.39 1.06 43.45 4.79
503 695 0.731855 GCGGTCCAACACGAGTAGTC 60.732 60.000 0.00 0.00 0.00 2.59
646 939 8.330466 TGTTTGAATAATACGAGTGGTCAAAT 57.670 30.769 0.00 0.00 36.31 2.32
710 1028 8.921205 AGGAGTACTATAAAATTCCATGTACGT 58.079 33.333 0.00 0.00 35.40 3.57
763 1081 8.021898 TGATATTGATCACTGATTAGGTGTGA 57.978 34.615 0.00 0.00 43.53 3.58
1012 1917 2.644887 GCTGTCATGGCCAAGTTCA 58.355 52.632 10.96 8.91 0.00 3.18
1058 1963 1.909781 CCATTGTTGCCCTGGCTGT 60.910 57.895 9.97 0.00 42.51 4.40
1109 2026 4.351192 GAGCACACCTTTGTTGTAAGTTG 58.649 43.478 0.00 0.00 31.66 3.16
1135 2052 5.515184 ACTATATATAGAGCGAGCAATGCG 58.485 41.667 23.70 0.00 34.11 4.73
1142 2059 1.135315 GCGAGCAATGCGTGACAAT 59.865 52.632 0.00 0.00 0.00 2.71
1144 2061 0.247814 CGAGCAATGCGTGACAATCC 60.248 55.000 0.00 0.00 0.00 3.01
1149 2066 1.016627 AATGCGTGACAATCCATCGG 58.983 50.000 0.00 0.00 0.00 4.18
1186 2107 9.188588 CATGCTTGATTTGTTCCAATATGATAC 57.811 33.333 0.00 0.00 0.00 2.24
1197 2118 6.790232 TCCAATATGATACGCCTGATGATA 57.210 37.500 0.00 0.00 0.00 2.15
1198 2119 7.365497 TCCAATATGATACGCCTGATGATAT 57.635 36.000 0.00 0.00 0.00 1.63
1199 2120 8.477419 TCCAATATGATACGCCTGATGATATA 57.523 34.615 0.00 0.00 0.00 0.86
1200 2121 9.093458 TCCAATATGATACGCCTGATGATATAT 57.907 33.333 0.00 0.00 0.00 0.86
1363 2288 8.249638 CACAACATAACAATCCATTGGTAATCA 58.750 33.333 1.86 0.00 42.61 2.57
1364 2289 8.980596 ACAACATAACAATCCATTGGTAATCAT 58.019 29.630 1.86 0.00 42.61 2.45
1365 2290 9.467258 CAACATAACAATCCATTGGTAATCATC 57.533 33.333 1.86 0.00 42.61 2.92
1432 2441 3.444034 AGCACTACTCGCTAATCTTGTGA 59.556 43.478 0.00 0.00 38.15 3.58
1466 2482 7.307694 TCTTGTTAATCATGTGCTTTGTGATC 58.692 34.615 0.00 0.00 31.74 2.92
1664 2680 2.192979 GCCTTCATCATCCGGCCA 59.807 61.111 2.24 0.00 36.56 5.36
1667 2683 2.513666 TTCATCATCCGGCCACGC 60.514 61.111 2.24 0.00 39.22 5.34
1724 2740 3.319972 TCCCCATCGTTATAGGTTCTTCG 59.680 47.826 0.00 0.00 0.00 3.79
1725 2741 3.554337 CCCCATCGTTATAGGTTCTTCGG 60.554 52.174 0.00 0.00 0.00 4.30
1731 2747 7.309012 CCATCGTTATAGGTTCTTCGGAGATTA 60.309 40.741 0.00 0.00 35.04 1.75
1759 2790 1.539388 AGCAAATCAATTTGGCGTCGA 59.461 42.857 15.29 0.00 45.44 4.20
1761 2792 3.376859 AGCAAATCAATTTGGCGTCGATA 59.623 39.130 15.29 0.00 45.44 2.92
1952 2983 5.585047 GCTCCGGTAATCATCTGTTTTTAGT 59.415 40.000 0.00 0.00 0.00 2.24
2007 3038 5.841957 GGAGCATGTCCATGTCTAAAAAT 57.158 39.130 8.91 0.00 46.10 1.82
2008 3039 5.825507 GGAGCATGTCCATGTCTAAAAATC 58.174 41.667 8.91 0.00 46.10 2.17
2049 3080 9.211410 TGATATGGTGAAAAATATTGGACCATT 57.789 29.630 18.69 0.00 39.90 3.16
2134 3165 0.322546 GGGTCGTGGAAGATGGCTTT 60.323 55.000 0.00 0.00 33.61 3.51
2174 3205 1.305381 AAGACCTACCTGCTCCGCT 60.305 57.895 0.00 0.00 0.00 5.52
2207 3238 1.786004 CGCTCTACTCCGAGTACTACG 59.214 57.143 4.01 1.36 33.55 3.51
2362 3393 0.737219 AGTACTACATGGTCGCCGTC 59.263 55.000 0.00 0.00 0.00 4.79
2398 3429 2.737180 CCCGACATCCAGATCCCG 59.263 66.667 0.00 0.00 0.00 5.14
2400 3431 1.832608 CCGACATCCAGATCCCGGA 60.833 63.158 0.73 4.03 35.88 5.14
2524 3555 2.224769 GGTGTCCTTCAACTTCCATGGA 60.225 50.000 11.44 11.44 0.00 3.41
2968 3999 3.723348 GTGTTCCAGAACGCGGCC 61.723 66.667 12.47 0.51 43.94 6.13
3096 4127 4.812476 CGTGGATCCGCCGCTCAA 62.812 66.667 19.63 0.00 45.27 3.02
3124 4155 2.592308 CTTGTCCCCAGGCTAGGC 59.408 66.667 8.55 8.55 0.00 3.93
3229 4606 9.623350 GAAACTATATAATACTCACTCCGTTCC 57.377 37.037 0.00 0.00 0.00 3.62
3230 4607 8.937207 AACTATATAATACTCACTCCGTTCCT 57.063 34.615 0.00 0.00 0.00 3.36
3239 4616 9.729281 AATACTCACTCCGTTCCTAAATAAAAA 57.271 29.630 0.00 0.00 0.00 1.94
3275 4652 3.287867 ACGAAGGAAGTATACGAGGGA 57.712 47.619 0.00 0.00 0.00 4.20
3286 4663 3.611766 ATACGAGGGAAACACAGGAAG 57.388 47.619 0.00 0.00 0.00 3.46
3290 4667 2.561419 CGAGGGAAACACAGGAAGTCTA 59.439 50.000 0.00 0.00 0.00 2.59
3291 4668 3.195825 CGAGGGAAACACAGGAAGTCTAT 59.804 47.826 0.00 0.00 0.00 1.98
3292 4669 4.401519 CGAGGGAAACACAGGAAGTCTATA 59.598 45.833 0.00 0.00 0.00 1.31
3294 4671 6.301169 AGGGAAACACAGGAAGTCTATAAG 57.699 41.667 0.00 0.00 0.00 1.73
3296 4673 6.155393 AGGGAAACACAGGAAGTCTATAAGAG 59.845 42.308 0.00 0.00 0.00 2.85
3323 4707 8.477256 AGAGAGAGAGAGAATTTTACTCCAATG 58.523 37.037 0.00 0.00 35.27 2.82
3337 4721 4.152647 ACTCCAATGTGTCTGTCTAGTCA 58.847 43.478 0.00 0.00 0.00 3.41
3338 4722 4.774726 ACTCCAATGTGTCTGTCTAGTCAT 59.225 41.667 0.00 0.00 0.00 3.06
3340 4724 6.114187 TCCAATGTGTCTGTCTAGTCATTT 57.886 37.500 0.00 0.00 0.00 2.32
3341 4725 5.934043 TCCAATGTGTCTGTCTAGTCATTTG 59.066 40.000 0.00 0.00 0.00 2.32
3342 4726 5.702670 CCAATGTGTCTGTCTAGTCATTTGT 59.297 40.000 0.00 0.00 0.00 2.83
3343 4727 6.205464 CCAATGTGTCTGTCTAGTCATTTGTT 59.795 38.462 0.00 0.00 0.00 2.83
3344 4728 7.255242 CCAATGTGTCTGTCTAGTCATTTGTTT 60.255 37.037 0.00 0.00 0.00 2.83
3346 4730 7.946655 TGTGTCTGTCTAGTCATTTGTTTAG 57.053 36.000 0.00 0.00 0.00 1.85
3348 4732 8.201464 TGTGTCTGTCTAGTCATTTGTTTAGAA 58.799 33.333 0.00 0.00 0.00 2.10
3376 4822 1.055040 TGCAAGTTTTTCCCATGGGG 58.945 50.000 30.93 12.85 46.11 4.96
3391 4837 2.550277 TGGGGTCTGATGCTTCTCTA 57.450 50.000 0.88 0.00 0.00 2.43
3392 4838 2.111384 TGGGGTCTGATGCTTCTCTAC 58.889 52.381 0.88 0.00 0.00 2.59
3393 4839 2.111384 GGGGTCTGATGCTTCTCTACA 58.889 52.381 0.88 0.00 0.00 2.74
3506 4960 2.636830 ACATTGGAATCAGCTCTTCCG 58.363 47.619 16.25 7.78 44.29 4.30
3534 4988 3.788797 GCCTGTAGATTTTCCGAAATGCG 60.789 47.826 0.00 0.00 35.65 4.73
3555 5009 3.489398 CGACCAATAGTCTAGCAGTGACC 60.489 52.174 0.00 0.00 43.91 4.02
3559 5013 2.039818 TAGTCTAGCAGTGACCGGAG 57.960 55.000 9.46 0.00 35.21 4.63
3569 5023 1.614413 AGTGACCGGAGAAAGAGTGAC 59.386 52.381 9.46 0.00 0.00 3.67
3580 5034 5.296151 AGAAAGAGTGACATCTTGGACAA 57.704 39.130 0.00 0.00 39.47 3.18
3581 5035 5.874093 AGAAAGAGTGACATCTTGGACAAT 58.126 37.500 0.00 0.00 39.47 2.71
3582 5036 5.936956 AGAAAGAGTGACATCTTGGACAATC 59.063 40.000 0.00 0.00 39.47 2.67
3583 5037 5.495926 AAGAGTGACATCTTGGACAATCT 57.504 39.130 0.00 0.00 38.12 2.40
3584 5038 5.083533 AGAGTGACATCTTGGACAATCTC 57.916 43.478 0.00 0.00 31.77 2.75
3585 5039 3.854666 AGTGACATCTTGGACAATCTCG 58.145 45.455 0.00 0.00 0.00 4.04
3586 5040 3.511540 AGTGACATCTTGGACAATCTCGA 59.488 43.478 0.00 0.00 0.00 4.04
3587 5041 3.614616 GTGACATCTTGGACAATCTCGAC 59.385 47.826 0.00 0.00 0.00 4.20
3588 5042 3.258123 TGACATCTTGGACAATCTCGACA 59.742 43.478 0.00 0.00 0.00 4.35
3589 5043 4.081476 TGACATCTTGGACAATCTCGACAT 60.081 41.667 0.00 0.00 0.00 3.06
3590 5044 4.186926 ACATCTTGGACAATCTCGACATG 58.813 43.478 0.00 0.00 0.00 3.21
3591 5045 2.621338 TCTTGGACAATCTCGACATGC 58.379 47.619 0.00 0.00 0.00 4.06
3592 5046 2.028203 TCTTGGACAATCTCGACATGCA 60.028 45.455 0.00 0.00 0.00 3.96
3593 5047 2.470983 TGGACAATCTCGACATGCAA 57.529 45.000 0.00 0.00 0.00 4.08
3594 5048 2.777094 TGGACAATCTCGACATGCAAA 58.223 42.857 0.00 0.00 0.00 3.68
3595 5049 3.346315 TGGACAATCTCGACATGCAAAT 58.654 40.909 0.00 0.00 0.00 2.32
3596 5050 4.512484 TGGACAATCTCGACATGCAAATA 58.488 39.130 0.00 0.00 0.00 1.40
3597 5051 5.125356 TGGACAATCTCGACATGCAAATAT 58.875 37.500 0.00 0.00 0.00 1.28
3598 5052 6.287525 TGGACAATCTCGACATGCAAATATA 58.712 36.000 0.00 0.00 0.00 0.86
3599 5053 6.202762 TGGACAATCTCGACATGCAAATATAC 59.797 38.462 0.00 0.00 0.00 1.47
3600 5054 6.202762 GGACAATCTCGACATGCAAATATACA 59.797 38.462 0.00 0.00 0.00 2.29
3601 5055 7.095060 GGACAATCTCGACATGCAAATATACAT 60.095 37.037 0.00 0.00 0.00 2.29
3603 5057 7.442062 ACAATCTCGACATGCAAATATACATGA 59.558 33.333 16.15 0.00 45.23 3.07
3604 5058 7.592439 ATCTCGACATGCAAATATACATGAG 57.408 36.000 16.15 11.06 45.23 2.90
3605 5059 6.748132 TCTCGACATGCAAATATACATGAGA 58.252 36.000 16.15 13.49 45.23 3.27
3606 5060 7.209475 TCTCGACATGCAAATATACATGAGAA 58.791 34.615 16.15 4.42 45.23 2.87
3607 5061 7.710475 TCTCGACATGCAAATATACATGAGAAA 59.290 33.333 16.15 4.16 45.23 2.52
3608 5062 8.382030 TCGACATGCAAATATACATGAGAAAT 57.618 30.769 16.15 0.00 45.23 2.17
3609 5063 8.839343 TCGACATGCAAATATACATGAGAAATT 58.161 29.630 16.15 0.00 45.23 1.82
3610 5064 9.454585 CGACATGCAAATATACATGAGAAATTT 57.545 29.630 16.15 0.00 45.23 1.82
3776 5230 8.657074 TGGACTACCAATTGATTAACGATTAG 57.343 34.615 7.12 0.00 43.91 1.73
3777 5231 8.262227 TGGACTACCAATTGATTAACGATTAGT 58.738 33.333 7.12 0.00 43.91 2.24
3778 5232 9.754382 GGACTACCAATTGATTAACGATTAGTA 57.246 33.333 7.12 0.00 35.97 1.82
3780 5234 9.538508 ACTACCAATTGATTAACGATTAGTACC 57.461 33.333 7.12 0.00 31.96 3.34
3781 5235 9.537192 CTACCAATTGATTAACGATTAGTACCA 57.463 33.333 7.12 0.00 31.96 3.25
3782 5236 8.205131 ACCAATTGATTAACGATTAGTACCAC 57.795 34.615 7.12 0.00 31.96 4.16
3783 5237 7.281549 ACCAATTGATTAACGATTAGTACCACC 59.718 37.037 7.12 0.00 31.96 4.61
3784 5238 7.497909 CCAATTGATTAACGATTAGTACCACCT 59.502 37.037 7.12 0.00 31.96 4.00
3785 5239 8.548721 CAATTGATTAACGATTAGTACCACCTC 58.451 37.037 0.00 0.00 31.96 3.85
3786 5240 5.824429 TGATTAACGATTAGTACCACCTCG 58.176 41.667 0.00 0.00 35.56 4.63
3787 5241 4.637483 TTAACGATTAGTACCACCTCGG 57.363 45.455 0.00 0.00 42.50 4.63
3788 5242 2.425143 ACGATTAGTACCACCTCGGA 57.575 50.000 0.00 0.00 38.63 4.55
3789 5243 2.941480 ACGATTAGTACCACCTCGGAT 58.059 47.619 0.00 0.00 38.63 4.18
3790 5244 4.090761 ACGATTAGTACCACCTCGGATA 57.909 45.455 0.00 0.00 38.63 2.59
3791 5245 4.660168 ACGATTAGTACCACCTCGGATAT 58.340 43.478 0.00 0.00 38.63 1.63
3792 5246 4.699257 ACGATTAGTACCACCTCGGATATC 59.301 45.833 0.00 0.00 38.63 1.63
3793 5247 4.698780 CGATTAGTACCACCTCGGATATCA 59.301 45.833 4.83 0.00 38.63 2.15
3794 5248 5.182570 CGATTAGTACCACCTCGGATATCAA 59.817 44.000 4.83 0.00 38.63 2.57
3795 5249 6.591750 ATTAGTACCACCTCGGATATCAAG 57.408 41.667 4.83 1.34 38.63 3.02
3863 5317 4.070552 GCAGGTCCGCCTCGTCTT 62.071 66.667 0.00 0.00 44.97 3.01
3935 5389 2.082231 GAGGGCTTCGTTTTTAGTCCC 58.918 52.381 0.00 0.00 36.81 4.46
4252 5707 2.608546 CGACTTCCCGACTGTCTACTAG 59.391 54.545 6.21 0.00 0.00 2.57
4474 5929 8.446489 TGTTGCAAAATATTCTCACAATAACG 57.554 30.769 0.00 0.00 0.00 3.18
4475 5930 7.061673 TGTTGCAAAATATTCTCACAATAACGC 59.938 33.333 0.00 0.00 0.00 4.84
4476 5931 5.736824 TGCAAAATATTCTCACAATAACGCG 59.263 36.000 3.53 3.53 0.00 6.01
4477 5932 5.737290 GCAAAATATTCTCACAATAACGCGT 59.263 36.000 5.58 5.58 0.00 6.01
4478 5933 6.290540 GCAAAATATTCTCACAATAACGCGTG 60.291 38.462 14.98 1.74 34.34 5.34
4479 5934 5.403897 AATATTCTCACAATAACGCGTGG 57.596 39.130 14.98 5.64 33.83 4.94
4480 5935 1.434555 TTCTCACAATAACGCGTGGG 58.565 50.000 14.98 0.00 34.78 4.61
4481 5936 0.390603 TCTCACAATAACGCGTGGGG 60.391 55.000 14.98 4.19 34.23 4.96
4482 5937 0.672401 CTCACAATAACGCGTGGGGT 60.672 55.000 14.98 6.38 33.83 4.95
4483 5938 0.607112 TCACAATAACGCGTGGGGTA 59.393 50.000 14.98 0.40 33.83 3.69
4484 5939 1.207570 TCACAATAACGCGTGGGGTAT 59.792 47.619 14.98 3.47 33.83 2.73
4485 5940 1.595794 CACAATAACGCGTGGGGTATC 59.404 52.381 14.98 0.00 0.00 2.24
4486 5941 1.207570 ACAATAACGCGTGGGGTATCA 59.792 47.619 14.98 0.00 0.00 2.15
4487 5942 2.158871 ACAATAACGCGTGGGGTATCAT 60.159 45.455 14.98 0.00 0.00 2.45
4488 5943 2.450609 ATAACGCGTGGGGTATCATC 57.549 50.000 14.98 0.00 0.00 2.92
4489 5944 1.405872 TAACGCGTGGGGTATCATCT 58.594 50.000 14.98 0.00 0.00 2.90
4490 5945 1.405872 AACGCGTGGGGTATCATCTA 58.594 50.000 14.98 0.00 0.00 1.98
4491 5946 0.959553 ACGCGTGGGGTATCATCTAG 59.040 55.000 12.93 0.00 0.00 2.43
4492 5947 0.959553 CGCGTGGGGTATCATCTAGT 59.040 55.000 0.00 0.00 0.00 2.57
4493 5948 1.340248 CGCGTGGGGTATCATCTAGTT 59.660 52.381 0.00 0.00 0.00 2.24
4494 5949 2.555325 CGCGTGGGGTATCATCTAGTTA 59.445 50.000 0.00 0.00 0.00 2.24
4495 5950 3.005050 CGCGTGGGGTATCATCTAGTTAA 59.995 47.826 0.00 0.00 0.00 2.01
4496 5951 4.304939 GCGTGGGGTATCATCTAGTTAAC 58.695 47.826 0.00 0.00 0.00 2.01
4497 5952 4.202182 GCGTGGGGTATCATCTAGTTAACA 60.202 45.833 8.61 0.00 0.00 2.41
4498 5953 5.510861 GCGTGGGGTATCATCTAGTTAACAT 60.511 44.000 8.61 0.00 0.00 2.71
4499 5954 6.522054 CGTGGGGTATCATCTAGTTAACATT 58.478 40.000 8.61 0.00 0.00 2.71
4500 5955 7.663827 CGTGGGGTATCATCTAGTTAACATTA 58.336 38.462 8.61 0.00 0.00 1.90
4501 5956 8.311836 CGTGGGGTATCATCTAGTTAACATTAT 58.688 37.037 8.61 0.00 0.00 1.28
4518 5973 9.550406 TTAACATTATATAGAAACGAGGTTGGG 57.450 33.333 0.00 0.00 0.00 4.12
4519 5974 7.133133 ACATTATATAGAAACGAGGTTGGGT 57.867 36.000 0.00 0.00 0.00 4.51
4520 5975 7.215085 ACATTATATAGAAACGAGGTTGGGTC 58.785 38.462 0.00 0.00 0.00 4.46
4521 5976 7.070821 ACATTATATAGAAACGAGGTTGGGTCT 59.929 37.037 0.00 0.00 0.00 3.85
4522 5977 5.952347 ATATAGAAACGAGGTTGGGTCTT 57.048 39.130 0.00 0.00 0.00 3.01
4523 5978 4.635699 ATAGAAACGAGGTTGGGTCTTT 57.364 40.909 0.00 0.00 0.00 2.52
4524 5979 3.292492 AGAAACGAGGTTGGGTCTTTT 57.708 42.857 0.00 0.00 0.00 2.27
4525 5980 3.628008 AGAAACGAGGTTGGGTCTTTTT 58.372 40.909 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.271800 CGCCACTGAAGATCACCTAAC 58.728 52.381 0.00 0.00 0.00 2.34
3 4 1.078848 GCGCCACTGAAGATCACCT 60.079 57.895 0.00 0.00 0.00 4.00
5 6 0.955428 TTGGCGCCACTGAAGATCAC 60.955 55.000 32.95 0.00 0.00 3.06
6 7 0.955428 GTTGGCGCCACTGAAGATCA 60.955 55.000 32.95 8.41 0.00 2.92
7 8 1.648467 GGTTGGCGCCACTGAAGATC 61.648 60.000 32.95 10.44 0.00 2.75
8 9 1.675641 GGTTGGCGCCACTGAAGAT 60.676 57.895 32.95 0.00 0.00 2.40
9 10 2.281484 GGTTGGCGCCACTGAAGA 60.281 61.111 32.95 11.21 0.00 2.87
10 11 1.898574 AAGGTTGGCGCCACTGAAG 60.899 57.895 32.95 0.00 0.00 3.02
11 12 2.192861 CAAGGTTGGCGCCACTGAA 61.193 57.895 32.95 12.64 0.00 3.02
12 13 2.594303 CAAGGTTGGCGCCACTGA 60.594 61.111 32.95 13.12 0.00 3.41
13 14 4.347453 GCAAGGTTGGCGCCACTG 62.347 66.667 32.95 23.75 0.00 3.66
14 15 2.762969 TATGCAAGGTTGGCGCCACT 62.763 55.000 32.95 22.22 0.00 4.00
15 16 2.270297 CTATGCAAGGTTGGCGCCAC 62.270 60.000 32.95 23.59 0.00 5.01
16 17 2.034843 TATGCAAGGTTGGCGCCA 59.965 55.556 29.03 29.03 0.00 5.69
17 18 1.595093 AACTATGCAAGGTTGGCGCC 61.595 55.000 22.73 22.73 0.00 6.53
18 19 0.243636 AAACTATGCAAGGTTGGCGC 59.756 50.000 0.00 0.00 32.35 6.53
19 20 1.812571 AGAAACTATGCAAGGTTGGCG 59.187 47.619 8.14 0.00 34.34 5.69
20 21 2.164422 GGAGAAACTATGCAAGGTTGGC 59.836 50.000 8.14 4.91 34.34 4.52
21 22 3.690460 AGGAGAAACTATGCAAGGTTGG 58.310 45.455 8.14 0.00 34.34 3.77
22 23 4.142816 CGAAGGAGAAACTATGCAAGGTTG 60.143 45.833 8.14 0.00 34.34 3.77
23 24 4.003648 CGAAGGAGAAACTATGCAAGGTT 58.996 43.478 0.00 0.00 38.04 3.50
24 25 3.260884 TCGAAGGAGAAACTATGCAAGGT 59.739 43.478 0.00 0.00 0.00 3.50
25 26 3.861840 TCGAAGGAGAAACTATGCAAGG 58.138 45.455 0.00 0.00 0.00 3.61
26 27 6.428385 AATTCGAAGGAGAAACTATGCAAG 57.572 37.500 3.35 0.00 33.43 4.01
27 28 6.655003 AGAAATTCGAAGGAGAAACTATGCAA 59.345 34.615 3.35 0.00 33.43 4.08
28 29 6.092670 CAGAAATTCGAAGGAGAAACTATGCA 59.907 38.462 3.35 0.00 33.43 3.96
29 30 6.457528 CCAGAAATTCGAAGGAGAAACTATGC 60.458 42.308 3.35 0.00 33.43 3.14
30 31 6.037610 CCCAGAAATTCGAAGGAGAAACTATG 59.962 42.308 3.35 0.00 33.43 2.23
31 32 6.116126 CCCAGAAATTCGAAGGAGAAACTAT 58.884 40.000 3.35 0.00 33.43 2.12
32 33 5.012768 ACCCAGAAATTCGAAGGAGAAACTA 59.987 40.000 3.35 0.00 33.43 2.24
33 34 4.202472 ACCCAGAAATTCGAAGGAGAAACT 60.202 41.667 3.35 0.00 33.43 2.66
34 35 4.072839 ACCCAGAAATTCGAAGGAGAAAC 58.927 43.478 3.35 0.00 33.43 2.78
35 36 4.367039 ACCCAGAAATTCGAAGGAGAAA 57.633 40.909 3.35 0.00 33.43 2.52
36 37 5.221762 TGTTACCCAGAAATTCGAAGGAGAA 60.222 40.000 3.35 0.00 34.31 2.87
37 38 4.285003 TGTTACCCAGAAATTCGAAGGAGA 59.715 41.667 3.35 0.00 0.00 3.71
38 39 4.575885 TGTTACCCAGAAATTCGAAGGAG 58.424 43.478 3.35 0.00 0.00 3.69
39 40 4.627284 TGTTACCCAGAAATTCGAAGGA 57.373 40.909 3.35 0.00 0.00 3.36
40 41 5.699097 TTTGTTACCCAGAAATTCGAAGG 57.301 39.130 3.35 0.16 0.00 3.46
41 42 7.865385 TGAATTTTGTTACCCAGAAATTCGAAG 59.135 33.333 3.35 0.00 45.00 3.79
42 43 7.650104 GTGAATTTTGTTACCCAGAAATTCGAA 59.350 33.333 0.00 0.00 45.00 3.71
43 44 7.142680 GTGAATTTTGTTACCCAGAAATTCGA 58.857 34.615 12.80 0.00 45.00 3.71
44 45 6.920758 TGTGAATTTTGTTACCCAGAAATTCG 59.079 34.615 12.80 0.00 45.00 3.34
45 46 8.655651 TTGTGAATTTTGTTACCCAGAAATTC 57.344 30.769 11.45 11.45 43.57 2.17
46 47 8.264347 ACTTGTGAATTTTGTTACCCAGAAATT 58.736 29.630 0.00 0.00 35.18 1.82
47 48 7.710475 CACTTGTGAATTTTGTTACCCAGAAAT 59.290 33.333 0.00 0.00 0.00 2.17
48 49 7.038659 CACTTGTGAATTTTGTTACCCAGAAA 58.961 34.615 0.00 0.00 0.00 2.52
49 50 6.378564 TCACTTGTGAATTTTGTTACCCAGAA 59.621 34.615 0.44 0.00 0.00 3.02
50 51 5.888724 TCACTTGTGAATTTTGTTACCCAGA 59.111 36.000 0.44 0.00 0.00 3.86
51 52 6.142818 TCACTTGTGAATTTTGTTACCCAG 57.857 37.500 0.44 0.00 0.00 4.45
52 53 6.723298 ATCACTTGTGAATTTTGTTACCCA 57.277 33.333 7.57 0.00 0.00 4.51
53 54 8.432110 AAAATCACTTGTGAATTTTGTTACCC 57.568 30.769 7.57 0.00 0.00 3.69
59 60 8.140677 TGCCTAAAAATCACTTGTGAATTTTG 57.859 30.769 26.61 19.88 34.15 2.44
120 121 6.685368 GCTTGGTCCTTCTTAACCATTTGTTT 60.685 38.462 0.00 0.00 44.72 2.83
170 171 5.790495 GCAGCAAAGAACTACTGTAAATTCG 59.210 40.000 0.00 0.00 32.65 3.34
191 192 2.418976 CCATGACAGTCTGAATGTGCAG 59.581 50.000 16.13 4.67 37.24 4.41
276 277 2.629137 TGCACAGCATTTTCAATCTGGT 59.371 40.909 0.00 0.00 31.71 4.00
277 278 3.057104 TCTGCACAGCATTTTCAATCTGG 60.057 43.478 0.00 0.00 38.13 3.86
278 279 3.918591 GTCTGCACAGCATTTTCAATCTG 59.081 43.478 0.00 0.00 38.13 2.90
279 280 3.365666 CGTCTGCACAGCATTTTCAATCT 60.366 43.478 0.00 0.00 38.13 2.40
280 281 2.912967 CGTCTGCACAGCATTTTCAATC 59.087 45.455 0.00 0.00 38.13 2.67
281 282 2.553602 TCGTCTGCACAGCATTTTCAAT 59.446 40.909 0.00 0.00 38.13 2.57
282 283 1.946081 TCGTCTGCACAGCATTTTCAA 59.054 42.857 0.00 0.00 38.13 2.69
283 284 1.592064 TCGTCTGCACAGCATTTTCA 58.408 45.000 0.00 0.00 38.13 2.69
284 285 2.512885 CATCGTCTGCACAGCATTTTC 58.487 47.619 0.00 0.00 38.13 2.29
285 286 1.200716 CCATCGTCTGCACAGCATTTT 59.799 47.619 0.00 0.00 38.13 1.82
286 287 0.806868 CCATCGTCTGCACAGCATTT 59.193 50.000 0.00 0.00 38.13 2.32
287 288 0.036105 TCCATCGTCTGCACAGCATT 60.036 50.000 0.00 0.00 38.13 3.56
288 289 0.179702 ATCCATCGTCTGCACAGCAT 59.820 50.000 0.00 0.00 38.13 3.79
289 290 0.460811 GATCCATCGTCTGCACAGCA 60.461 55.000 0.00 0.00 36.92 4.41
290 291 0.179089 AGATCCATCGTCTGCACAGC 60.179 55.000 0.00 0.00 0.00 4.40
291 292 3.573598 GATAGATCCATCGTCTGCACAG 58.426 50.000 0.00 0.00 0.00 3.66
292 293 2.030805 CGATAGATCCATCGTCTGCACA 60.031 50.000 14.41 0.00 42.22 4.57
293 294 2.590073 CGATAGATCCATCGTCTGCAC 58.410 52.381 14.41 0.00 42.22 4.57
294 295 2.997485 CGATAGATCCATCGTCTGCA 57.003 50.000 14.41 0.00 42.22 4.41
301 302 2.030717 ACTGTCGTGCGATAGATCCATC 60.031 50.000 21.63 0.00 36.93 3.51
302 303 1.957177 ACTGTCGTGCGATAGATCCAT 59.043 47.619 21.63 0.00 36.93 3.41
303 304 1.389555 ACTGTCGTGCGATAGATCCA 58.610 50.000 21.63 3.30 36.93 3.41
304 305 2.120232 CAACTGTCGTGCGATAGATCC 58.880 52.381 21.63 0.00 36.93 3.36
305 306 2.120232 CCAACTGTCGTGCGATAGATC 58.880 52.381 21.63 0.00 36.93 2.75
306 307 1.749063 TCCAACTGTCGTGCGATAGAT 59.251 47.619 21.63 9.79 36.93 1.98
307 308 1.135489 GTCCAACTGTCGTGCGATAGA 60.135 52.381 21.63 0.55 36.93 1.98
308 309 1.269166 GTCCAACTGTCGTGCGATAG 58.731 55.000 15.00 15.00 38.95 2.08
309 310 0.455464 CGTCCAACTGTCGTGCGATA 60.455 55.000 0.00 0.00 0.00 2.92
310 311 1.733041 CGTCCAACTGTCGTGCGAT 60.733 57.895 0.00 0.00 0.00 4.58
311 312 2.137425 ATCGTCCAACTGTCGTGCGA 62.137 55.000 0.00 0.00 0.00 5.10
312 313 1.733041 ATCGTCCAACTGTCGTGCG 60.733 57.895 0.00 0.00 0.00 5.34
313 314 1.781555 CATCGTCCAACTGTCGTGC 59.218 57.895 0.00 0.00 0.00 5.34
314 315 1.626654 GGCATCGTCCAACTGTCGTG 61.627 60.000 0.00 0.00 0.00 4.35
315 316 1.374252 GGCATCGTCCAACTGTCGT 60.374 57.895 0.00 0.00 0.00 4.34
316 317 1.374125 TGGCATCGTCCAACTGTCG 60.374 57.895 0.00 0.00 32.18 4.35
317 318 0.602638 TGTGGCATCGTCCAACTGTC 60.603 55.000 0.00 0.00 37.96 3.51
318 319 0.036732 ATGTGGCATCGTCCAACTGT 59.963 50.000 0.00 0.00 37.96 3.55
319 320 0.729116 GATGTGGCATCGTCCAACTG 59.271 55.000 0.00 0.00 37.96 3.16
320 321 0.392998 GGATGTGGCATCGTCCAACT 60.393 55.000 17.84 0.00 41.62 3.16
321 322 0.676466 TGGATGTGGCATCGTCCAAC 60.676 55.000 21.15 2.11 46.50 3.77
322 323 1.682257 TGGATGTGGCATCGTCCAA 59.318 52.632 21.15 10.36 46.50 3.53
324 325 2.182842 GCTGGATGTGGCATCGTCC 61.183 63.158 16.61 16.61 42.15 4.79
325 326 2.182842 GGCTGGATGTGGCATCGTC 61.183 63.158 0.00 0.00 0.00 4.20
326 327 2.124570 GGCTGGATGTGGCATCGT 60.125 61.111 0.00 0.00 0.00 3.73
327 328 3.274586 CGGCTGGATGTGGCATCG 61.275 66.667 0.00 0.00 0.00 3.84
328 329 1.718757 GAACGGCTGGATGTGGCATC 61.719 60.000 0.00 0.80 0.00 3.91
329 330 1.750399 GAACGGCTGGATGTGGCAT 60.750 57.895 0.00 0.00 0.00 4.40
330 331 2.359850 GAACGGCTGGATGTGGCA 60.360 61.111 0.00 0.00 0.00 4.92
331 332 2.359850 TGAACGGCTGGATGTGGC 60.360 61.111 0.00 0.00 0.00 5.01
332 333 1.003355 AGTGAACGGCTGGATGTGG 60.003 57.895 0.00 0.00 0.00 4.17
333 334 2.165380 CAGTGAACGGCTGGATGTG 58.835 57.895 0.00 0.00 0.00 3.21
334 335 4.701663 CAGTGAACGGCTGGATGT 57.298 55.556 0.00 0.00 0.00 3.06
339 340 1.284982 CGAAGTCCAGTGAACGGCTG 61.285 60.000 0.00 0.00 0.00 4.85
340 341 1.006102 CGAAGTCCAGTGAACGGCT 60.006 57.895 0.00 0.00 0.00 5.52
341 342 0.389948 ATCGAAGTCCAGTGAACGGC 60.390 55.000 0.00 0.00 0.00 5.68
342 343 1.067846 TCATCGAAGTCCAGTGAACGG 60.068 52.381 0.00 0.00 0.00 4.44
343 344 2.347697 TCATCGAAGTCCAGTGAACG 57.652 50.000 0.00 0.00 0.00 3.95
344 345 5.352284 ACATATCATCGAAGTCCAGTGAAC 58.648 41.667 0.00 0.00 0.00 3.18
345 346 5.598416 ACATATCATCGAAGTCCAGTGAA 57.402 39.130 0.00 0.00 0.00 3.18
346 347 6.294731 CCATACATATCATCGAAGTCCAGTGA 60.295 42.308 0.00 0.00 0.00 3.41
347 348 5.866092 CCATACATATCATCGAAGTCCAGTG 59.134 44.000 0.00 0.00 0.00 3.66
348 349 5.775195 TCCATACATATCATCGAAGTCCAGT 59.225 40.000 0.00 0.00 0.00 4.00
349 350 6.096036 GTCCATACATATCATCGAAGTCCAG 58.904 44.000 0.00 0.00 0.00 3.86
350 351 5.335661 CGTCCATACATATCATCGAAGTCCA 60.336 44.000 0.00 0.00 0.00 4.02
351 352 5.096169 CGTCCATACATATCATCGAAGTCC 58.904 45.833 0.00 0.00 0.00 3.85
352 353 5.795939 GTCGTCCATACATATCATCGAAGTC 59.204 44.000 0.00 0.00 0.00 3.01
353 354 5.335740 GGTCGTCCATACATATCATCGAAGT 60.336 44.000 0.00 0.00 0.00 3.01
354 355 5.096169 GGTCGTCCATACATATCATCGAAG 58.904 45.833 0.00 0.00 0.00 3.79
355 356 4.765339 AGGTCGTCCATACATATCATCGAA 59.235 41.667 0.51 0.00 35.89 3.71
356 357 4.156008 CAGGTCGTCCATACATATCATCGA 59.844 45.833 0.51 0.00 35.89 3.59
357 358 4.156008 TCAGGTCGTCCATACATATCATCG 59.844 45.833 0.51 0.00 35.89 3.84
358 359 5.644977 TCAGGTCGTCCATACATATCATC 57.355 43.478 0.51 0.00 35.89 2.92
359 360 5.481824 ACATCAGGTCGTCCATACATATCAT 59.518 40.000 0.51 0.00 35.89 2.45
360 361 4.832823 ACATCAGGTCGTCCATACATATCA 59.167 41.667 0.51 0.00 35.89 2.15
361 362 5.164233 CACATCAGGTCGTCCATACATATC 58.836 45.833 0.51 0.00 35.89 1.63
362 363 4.561530 GCACATCAGGTCGTCCATACATAT 60.562 45.833 0.51 0.00 35.89 1.78
363 364 3.243737 GCACATCAGGTCGTCCATACATA 60.244 47.826 0.51 0.00 35.89 2.29
364 365 2.483714 GCACATCAGGTCGTCCATACAT 60.484 50.000 0.51 0.00 35.89 2.29
365 366 1.134818 GCACATCAGGTCGTCCATACA 60.135 52.381 0.51 0.00 35.89 2.29
366 367 1.134818 TGCACATCAGGTCGTCCATAC 60.135 52.381 0.51 0.00 35.89 2.39
367 368 1.136891 CTGCACATCAGGTCGTCCATA 59.863 52.381 0.51 0.00 39.15 2.74
368 369 0.107993 CTGCACATCAGGTCGTCCAT 60.108 55.000 0.51 0.00 39.15 3.41
369 370 1.293179 CTGCACATCAGGTCGTCCA 59.707 57.895 0.51 0.00 39.15 4.02
370 371 2.103042 GCTGCACATCAGGTCGTCC 61.103 63.158 0.00 0.00 43.06 4.79
371 372 2.447887 CGCTGCACATCAGGTCGTC 61.448 63.158 0.00 0.00 43.06 4.20
372 373 2.433145 CGCTGCACATCAGGTCGT 60.433 61.111 0.00 0.00 43.06 4.34
373 374 2.433145 ACGCTGCACATCAGGTCG 60.433 61.111 0.00 0.00 43.06 4.79
374 375 2.447887 CGACGCTGCACATCAGGTC 61.448 63.158 0.00 0.00 43.06 3.85
375 376 2.433145 CGACGCTGCACATCAGGT 60.433 61.111 0.00 0.00 43.06 4.00
376 377 2.433145 ACGACGCTGCACATCAGG 60.433 61.111 0.00 0.00 43.06 3.86
377 378 2.774126 CACGACGCTGCACATCAG 59.226 61.111 0.00 0.00 45.62 2.90
378 379 3.413861 GCACGACGCTGCACATCA 61.414 61.111 14.68 0.00 37.11 3.07
379 380 3.413861 TGCACGACGCTGCACATC 61.414 61.111 17.25 0.00 42.36 3.06
383 384 2.442561 GATTTGTGCACGACGCTGCA 62.443 55.000 13.13 17.25 45.06 4.41
384 385 1.793613 GATTTGTGCACGACGCTGC 60.794 57.895 13.13 13.26 43.06 5.25
385 386 1.507713 CGATTTGTGCACGACGCTG 60.508 57.895 13.13 0.00 43.06 5.18
386 387 1.495584 AACGATTTGTGCACGACGCT 61.496 50.000 13.13 0.00 43.06 5.07
387 388 1.052768 GAACGATTTGTGCACGACGC 61.053 55.000 13.13 3.86 42.89 5.19
388 389 0.780637 CGAACGATTTGTGCACGACG 60.781 55.000 13.13 13.55 0.00 5.12
389 390 1.052768 GCGAACGATTTGTGCACGAC 61.053 55.000 13.13 0.00 0.00 4.34
390 391 1.203065 GCGAACGATTTGTGCACGA 59.797 52.632 13.13 7.71 0.00 4.35
391 392 2.131407 CGCGAACGATTTGTGCACG 61.131 57.895 13.13 1.70 43.93 5.34
392 393 3.723104 CGCGAACGATTTGTGCAC 58.277 55.556 10.75 10.75 43.93 4.57
395 396 1.181514 CGATGCGCGAACGATTTGTG 61.182 55.000 12.10 0.00 44.57 3.33
396 397 1.058748 CGATGCGCGAACGATTTGT 59.941 52.632 12.10 0.00 44.57 2.83
397 398 0.914996 GACGATGCGCGAACGATTTG 60.915 55.000 22.68 0.00 44.57 2.32
398 399 1.343821 GACGATGCGCGAACGATTT 59.656 52.632 22.68 5.16 44.57 2.17
399 400 1.742900 CTGACGATGCGCGAACGATT 61.743 55.000 22.68 5.78 44.57 3.34
400 401 2.202557 TGACGATGCGCGAACGAT 60.203 55.556 22.68 2.26 44.57 3.73
401 402 2.874315 CTGACGATGCGCGAACGA 60.874 61.111 22.68 0.00 44.57 3.85
402 403 4.543736 GCTGACGATGCGCGAACG 62.544 66.667 12.10 14.46 44.57 3.95
409 410 1.483424 GGTTAGAGCGCTGACGATGC 61.483 60.000 18.48 0.00 43.93 3.91
410 411 0.179137 TGGTTAGAGCGCTGACGATG 60.179 55.000 18.48 0.00 43.93 3.84
411 412 0.101399 CTGGTTAGAGCGCTGACGAT 59.899 55.000 18.48 0.00 43.93 3.73
412 413 0.958876 TCTGGTTAGAGCGCTGACGA 60.959 55.000 18.48 7.19 43.93 4.20
413 414 0.101399 ATCTGGTTAGAGCGCTGACG 59.899 55.000 18.48 0.00 36.14 4.35
414 415 1.929836 CAATCTGGTTAGAGCGCTGAC 59.070 52.381 18.48 10.88 36.14 3.51
415 416 1.134699 CCAATCTGGTTAGAGCGCTGA 60.135 52.381 18.48 3.66 36.14 4.26
416 417 1.293924 CCAATCTGGTTAGAGCGCTG 58.706 55.000 18.48 0.00 36.14 5.18
417 418 0.462759 GCCAATCTGGTTAGAGCGCT 60.463 55.000 11.27 11.27 40.46 5.92
418 419 0.462759 AGCCAATCTGGTTAGAGCGC 60.463 55.000 0.00 0.00 40.46 5.92
419 420 1.667724 CAAGCCAATCTGGTTAGAGCG 59.332 52.381 0.00 0.00 40.46 5.03
420 421 2.680339 GACAAGCCAATCTGGTTAGAGC 59.320 50.000 0.00 0.00 40.46 4.09
421 422 4.213564 AGACAAGCCAATCTGGTTAGAG 57.786 45.455 0.00 0.00 40.46 2.43
422 423 4.326826 CAAGACAAGCCAATCTGGTTAGA 58.673 43.478 0.00 0.00 40.46 2.10
423 424 3.119708 GCAAGACAAGCCAATCTGGTTAG 60.120 47.826 0.00 0.00 40.46 2.34
424 425 2.819608 GCAAGACAAGCCAATCTGGTTA 59.180 45.455 0.00 0.00 40.46 2.85
425 426 1.615392 GCAAGACAAGCCAATCTGGTT 59.385 47.619 0.00 0.00 40.46 3.67
426 427 1.202976 AGCAAGACAAGCCAATCTGGT 60.203 47.619 0.00 0.00 40.46 4.00
472 664 2.693285 GACCGCATACGTGTTCGC 59.307 61.111 0.00 0.00 41.18 4.70
489 681 4.210537 ACAAATTTCGACTACTCGTGTTGG 59.789 41.667 0.00 0.00 41.02 3.77
503 695 6.904011 TGCTAACAATGCAAAAACAAATTTCG 59.096 30.769 0.00 0.00 37.51 3.46
620 913 7.731882 TTGACCACTCGTATTATTCAAACAA 57.268 32.000 0.00 0.00 0.00 2.83
622 915 8.234546 ACATTTGACCACTCGTATTATTCAAAC 58.765 33.333 0.00 0.00 35.08 2.93
637 930 3.451141 TTTCCTGCAACATTTGACCAC 57.549 42.857 0.00 0.00 0.00 4.16
646 939 4.556501 CGCTATTGACTTTTTCCTGCAACA 60.557 41.667 0.00 0.00 0.00 3.33
685 978 9.538508 AACGTACATGGAATTTTATAGTACTCC 57.461 33.333 0.00 0.00 0.00 3.85
702 1017 5.985781 ACTGCTGACTTTTTAACGTACATG 58.014 37.500 0.00 0.00 0.00 3.21
784 1673 1.134560 GGTCGATCAACGCTACTCCTT 59.865 52.381 0.00 0.00 42.26 3.36
786 1675 0.591741 CGGTCGATCAACGCTACTCC 60.592 60.000 0.00 0.00 42.26 3.85
787 1676 2.856089 CGGTCGATCAACGCTACTC 58.144 57.895 0.00 0.00 42.26 2.59
808 1697 1.376609 AATCAGATTGAACGGGCGGC 61.377 55.000 0.00 0.00 0.00 6.53
918 1823 5.263599 TGAAGATTTGCCACATGTCCTATT 58.736 37.500 0.00 0.00 0.00 1.73
924 1829 5.622007 CGGTTTATGAAGATTTGCCACATGT 60.622 40.000 0.00 0.00 0.00 3.21
935 1840 7.201617 GCTAAACTACTTGCGGTTTATGAAGAT 60.202 37.037 0.00 0.00 37.31 2.40
1012 1917 4.740822 GTTGGAGGCCGCCATGGT 62.741 66.667 30.16 0.00 41.21 3.55
1109 2026 6.855914 GCATTGCTCGCTCTATATATAGTCTC 59.144 42.308 17.44 8.45 0.00 3.36
1135 2052 2.128035 GATCGACCGATGGATTGTCAC 58.872 52.381 9.83 0.00 34.60 3.67
1149 2066 4.722203 AATCAAGCATGAATCGATCGAC 57.278 40.909 22.06 9.52 39.49 4.20
1186 2107 6.385843 GCTCACCTATATATATCATCAGGCG 58.614 44.000 8.60 1.46 0.00 5.52
1197 2118 7.777440 TCATCTTCATCTCGCTCACCTATATAT 59.223 37.037 0.00 0.00 0.00 0.86
1198 2119 7.066404 GTCATCTTCATCTCGCTCACCTATATA 59.934 40.741 0.00 0.00 0.00 0.86
1199 2120 5.948758 TCATCTTCATCTCGCTCACCTATAT 59.051 40.000 0.00 0.00 0.00 0.86
1200 2121 5.182190 GTCATCTTCATCTCGCTCACCTATA 59.818 44.000 0.00 0.00 0.00 1.31
1386 2311 0.320050 TATGCGTGCAGTTCACTGGA 59.680 50.000 9.01 2.88 43.94 3.86
1432 2441 6.755141 GCACATGATTAACAAGATGAGCAAAT 59.245 34.615 0.00 0.00 0.00 2.32
1439 2448 7.085746 TCACAAAGCACATGATTAACAAGATG 58.914 34.615 0.00 0.00 0.00 2.90
1466 2482 1.162181 ATCCGTGCCTTCATGCATCG 61.162 55.000 0.00 0.00 44.30 3.84
1517 2533 1.810853 CTGCGTGATCATCGGCACA 60.811 57.895 13.08 5.92 34.78 4.57
1664 2680 3.262448 AAATGGGTAGGCGTGGCGT 62.262 57.895 0.00 0.00 0.00 5.68
1667 2683 1.817941 CGGAAATGGGTAGGCGTGG 60.818 63.158 0.00 0.00 0.00 4.94
1731 2747 7.436118 ACGCCAAATTGATTTGCTATATGAAT 58.564 30.769 10.26 0.00 44.32 2.57
1759 2790 7.047271 TCGATCTCGATCAGAATCTCATCTAT 58.953 38.462 7.59 0.00 44.22 1.98
1761 2792 5.244755 TCGATCTCGATCAGAATCTCATCT 58.755 41.667 7.59 0.00 44.22 2.90
1979 3010 2.684881 GACATGGACATGCTCCGATTTT 59.315 45.455 11.96 0.00 43.03 1.82
1983 3014 1.775385 TAGACATGGACATGCTCCGA 58.225 50.000 11.96 0.00 43.03 4.55
1984 3015 2.602257 TTAGACATGGACATGCTCCG 57.398 50.000 11.96 0.82 43.03 4.63
1985 3016 5.591877 AGATTTTTAGACATGGACATGCTCC 59.408 40.000 11.96 7.22 42.39 4.70
1987 3018 7.831193 AGTAAGATTTTTAGACATGGACATGCT 59.169 33.333 11.96 11.86 42.39 3.79
1988 3019 7.989826 AGTAAGATTTTTAGACATGGACATGC 58.010 34.615 11.96 5.59 42.39 4.06
1989 3020 9.388506 AGAGTAAGATTTTTAGACATGGACATG 57.611 33.333 10.57 10.57 44.15 3.21
2007 3038 9.868160 TCACCATATCAGAGAAATAGAGTAAGA 57.132 33.333 0.00 0.00 0.00 2.10
2088 3119 5.465390 TCACGTCGATGAACAAAAGAGAAAT 59.535 36.000 12.58 0.00 0.00 2.17
2089 3120 4.806775 TCACGTCGATGAACAAAAGAGAAA 59.193 37.500 12.58 0.00 0.00 2.52
2090 3121 4.364860 TCACGTCGATGAACAAAAGAGAA 58.635 39.130 12.58 0.00 0.00 2.87
2091 3122 3.972403 TCACGTCGATGAACAAAAGAGA 58.028 40.909 12.58 0.00 0.00 3.10
2106 3137 2.048503 CCACGACCCCTTCACGTC 60.049 66.667 0.00 0.00 38.18 4.34
2134 3165 4.314440 GGCTCCACGTCCAGCACA 62.314 66.667 15.43 0.00 37.38 4.57
2207 3238 3.195698 GTGCCCGGCGATCTTGAC 61.196 66.667 9.30 0.00 0.00 3.18
2333 3364 1.411612 CATGTAGTACTTCCCGGGGAC 59.588 57.143 23.50 13.89 0.00 4.46
2341 3372 1.133790 ACGGCGACCATGTAGTACTTC 59.866 52.381 16.62 0.00 0.00 3.01
2398 3429 3.519930 GCTCTCGACCGGGTCTCC 61.520 72.222 23.86 0.00 0.00 3.71
2400 3431 4.405671 TCGCTCTCGACCGGGTCT 62.406 66.667 23.86 0.00 40.21 3.85
2524 3555 1.322442 GGTTCAGGCTGCTCAAGTTT 58.678 50.000 10.34 0.00 0.00 2.66
2573 3604 1.067283 CAGGCTCTCATCAACAGTCGT 60.067 52.381 0.00 0.00 0.00 4.34
2580 3611 1.402852 CGACGAACAGGCTCTCATCAA 60.403 52.381 0.00 0.00 0.00 2.57
2968 3999 1.086696 GGTTGTCGGTGTCCATCATG 58.913 55.000 0.00 0.00 0.00 3.07
3096 4127 1.227853 GGGACAAGCACCGTGTTCT 60.228 57.895 0.00 0.00 0.00 3.01
3182 4213 9.154847 AGTTTCAAAGTTTCCAAATTCTCAAAG 57.845 29.630 0.00 0.00 0.00 2.77
3213 4590 9.729281 TTTTTATTTAGGAACGGAGTGAGTATT 57.271 29.630 0.00 0.00 45.00 1.89
3239 4616 9.955102 ACTTCCTTCGTTCCTAAATATAAGTTT 57.045 29.630 0.00 0.00 0.00 2.66
3245 4622 9.071276 TCGTATACTTCCTTCGTTCCTAAATAT 57.929 33.333 0.56 0.00 0.00 1.28
3246 4623 8.450578 TCGTATACTTCCTTCGTTCCTAAATA 57.549 34.615 0.56 0.00 0.00 1.40
3247 4624 7.338800 TCGTATACTTCCTTCGTTCCTAAAT 57.661 36.000 0.56 0.00 0.00 1.40
3248 4625 6.183360 CCTCGTATACTTCCTTCGTTCCTAAA 60.183 42.308 0.56 0.00 0.00 1.85
3249 4626 5.297776 CCTCGTATACTTCCTTCGTTCCTAA 59.702 44.000 0.56 0.00 0.00 2.69
3250 4627 4.818546 CCTCGTATACTTCCTTCGTTCCTA 59.181 45.833 0.56 0.00 0.00 2.94
3252 4629 3.243334 CCCTCGTATACTTCCTTCGTTCC 60.243 52.174 0.56 0.00 0.00 3.62
3253 4630 3.629398 TCCCTCGTATACTTCCTTCGTTC 59.371 47.826 0.56 0.00 0.00 3.95
3255 4632 3.287867 TCCCTCGTATACTTCCTTCGT 57.712 47.619 0.56 0.00 0.00 3.85
3256 4633 4.142315 TGTTTCCCTCGTATACTTCCTTCG 60.142 45.833 0.56 0.00 0.00 3.79
3257 4634 5.107824 GTGTTTCCCTCGTATACTTCCTTC 58.892 45.833 0.56 0.00 0.00 3.46
3258 4635 4.529377 TGTGTTTCCCTCGTATACTTCCTT 59.471 41.667 0.56 0.00 0.00 3.36
3259 4636 4.091549 TGTGTTTCCCTCGTATACTTCCT 58.908 43.478 0.56 0.00 0.00 3.36
3261 4638 4.159135 TCCTGTGTTTCCCTCGTATACTTC 59.841 45.833 0.56 0.00 0.00 3.01
3262 4639 4.091549 TCCTGTGTTTCCCTCGTATACTT 58.908 43.478 0.56 0.00 0.00 2.24
3269 4646 1.344763 AGACTTCCTGTGTTTCCCTCG 59.655 52.381 0.00 0.00 0.00 4.63
3270 4647 4.828072 ATAGACTTCCTGTGTTTCCCTC 57.172 45.455 0.00 0.00 0.00 4.30
3275 4652 7.891183 TCTCTCTCTTATAGACTTCCTGTGTTT 59.109 37.037 0.00 0.00 0.00 2.83
3292 4669 9.178758 GAGTAAAATTCTCTCTCTCTCTCTCTT 57.821 37.037 0.00 0.00 0.00 2.85
3294 4671 7.556275 TGGAGTAAAATTCTCTCTCTCTCTCTC 59.444 40.741 0.00 0.00 33.06 3.20
3296 4673 7.639113 TGGAGTAAAATTCTCTCTCTCTCTC 57.361 40.000 0.00 0.00 33.06 3.20
3323 4707 8.589335 TTCTAAACAAATGACTAGACAGACAC 57.411 34.615 0.00 0.00 29.20 3.67
3337 4721 7.981225 ACTTGCACACTTCATTTCTAAACAAAT 59.019 29.630 0.00 0.00 0.00 2.32
3338 4722 7.319646 ACTTGCACACTTCATTTCTAAACAAA 58.680 30.769 0.00 0.00 0.00 2.83
3340 4724 6.449635 ACTTGCACACTTCATTTCTAAACA 57.550 33.333 0.00 0.00 0.00 2.83
3341 4725 7.755582 AAACTTGCACACTTCATTTCTAAAC 57.244 32.000 0.00 0.00 0.00 2.01
3342 4726 8.770438 AAAAACTTGCACACTTCATTTCTAAA 57.230 26.923 0.00 0.00 0.00 1.85
3343 4727 7.491048 GGAAAAACTTGCACACTTCATTTCTAA 59.509 33.333 0.00 0.00 0.00 2.10
3344 4728 6.978080 GGAAAAACTTGCACACTTCATTTCTA 59.022 34.615 0.00 0.00 0.00 2.10
3346 4730 5.006649 GGGAAAAACTTGCACACTTCATTTC 59.993 40.000 0.00 0.00 0.00 2.17
3348 4732 4.081198 TGGGAAAAACTTGCACACTTCATT 60.081 37.500 0.00 0.00 0.00 2.57
3391 4837 8.337739 TGTACCACACCCCTATAAAATTAATGT 58.662 33.333 0.00 0.00 0.00 2.71
3392 4838 8.754991 TGTACCACACCCCTATAAAATTAATG 57.245 34.615 0.00 0.00 0.00 1.90
3393 4839 9.362151 CATGTACCACACCCCTATAAAATTAAT 57.638 33.333 0.00 0.00 0.00 1.40
3506 4960 2.007608 GGAAAATCTACAGGCGGTGAC 58.992 52.381 0.00 0.00 0.00 3.67
3534 4988 3.489398 CGGTCACTGCTAGACTATTGGTC 60.489 52.174 0.00 0.00 44.80 4.02
3555 5009 3.056536 TCCAAGATGTCACTCTTTCTCCG 60.057 47.826 0.00 0.00 33.18 4.63
3559 5013 5.936956 AGATTGTCCAAGATGTCACTCTTTC 59.063 40.000 0.00 0.00 33.18 2.62
3569 5023 3.002042 GCATGTCGAGATTGTCCAAGATG 59.998 47.826 0.00 0.00 0.00 2.90
3580 5034 7.381323 TCTCATGTATATTTGCATGTCGAGAT 58.619 34.615 12.48 0.00 43.87 2.75
3581 5035 6.748132 TCTCATGTATATTTGCATGTCGAGA 58.252 36.000 12.48 6.95 43.87 4.04
3582 5036 7.412137 TTCTCATGTATATTTGCATGTCGAG 57.588 36.000 12.48 5.10 43.87 4.04
3583 5037 7.784633 TTTCTCATGTATATTTGCATGTCGA 57.215 32.000 12.48 8.63 43.87 4.20
3584 5038 9.454585 AAATTTCTCATGTATATTTGCATGTCG 57.545 29.630 12.48 6.91 43.87 4.35
3734 5188 9.913310 TGGTAGTCCATATTTTAATGTGATTCA 57.087 29.630 1.33 0.00 39.03 2.57
3746 5200 9.621629 TCGTTAATCAATTGGTAGTCCATATTT 57.378 29.630 5.42 0.00 43.91 1.40
3747 5201 9.793259 ATCGTTAATCAATTGGTAGTCCATATT 57.207 29.630 5.42 0.00 43.91 1.28
3748 5202 9.793259 AATCGTTAATCAATTGGTAGTCCATAT 57.207 29.630 5.42 0.00 43.91 1.78
3750 5204 9.273016 CTAATCGTTAATCAATTGGTAGTCCAT 57.727 33.333 5.42 0.00 43.91 3.41
3751 5205 8.262227 ACTAATCGTTAATCAATTGGTAGTCCA 58.738 33.333 5.42 0.00 42.66 4.02
3752 5206 8.658499 ACTAATCGTTAATCAATTGGTAGTCC 57.342 34.615 5.42 0.00 0.00 3.85
3754 5208 9.538508 GGTACTAATCGTTAATCAATTGGTAGT 57.461 33.333 5.42 0.00 30.22 2.73
3755 5209 9.537192 TGGTACTAATCGTTAATCAATTGGTAG 57.463 33.333 5.42 0.00 30.22 3.18
3756 5210 9.316730 GTGGTACTAATCGTTAATCAATTGGTA 57.683 33.333 5.42 0.00 0.00 3.25
3757 5211 7.281549 GGTGGTACTAATCGTTAATCAATTGGT 59.718 37.037 5.42 0.00 0.00 3.67
3758 5212 7.497909 AGGTGGTACTAATCGTTAATCAATTGG 59.502 37.037 5.42 0.00 0.00 3.16
3759 5213 8.433421 AGGTGGTACTAATCGTTAATCAATTG 57.567 34.615 0.00 0.00 0.00 2.32
3760 5214 7.437267 CGAGGTGGTACTAATCGTTAATCAATT 59.563 37.037 6.87 0.00 0.00 2.32
3761 5215 6.921857 CGAGGTGGTACTAATCGTTAATCAAT 59.078 38.462 6.87 0.00 0.00 2.57
3762 5216 6.267817 CGAGGTGGTACTAATCGTTAATCAA 58.732 40.000 6.87 0.00 0.00 2.57
3763 5217 5.221106 CCGAGGTGGTACTAATCGTTAATCA 60.221 44.000 12.18 0.00 0.00 2.57
3764 5218 5.009010 TCCGAGGTGGTACTAATCGTTAATC 59.991 44.000 12.18 0.00 39.52 1.75
3765 5219 4.889409 TCCGAGGTGGTACTAATCGTTAAT 59.111 41.667 12.18 0.00 39.52 1.40
3766 5220 4.269183 TCCGAGGTGGTACTAATCGTTAA 58.731 43.478 12.18 0.00 39.52 2.01
3767 5221 3.884895 TCCGAGGTGGTACTAATCGTTA 58.115 45.455 12.18 0.89 39.52 3.18
3768 5222 2.726821 TCCGAGGTGGTACTAATCGTT 58.273 47.619 12.18 0.00 39.52 3.85
3769 5223 2.425143 TCCGAGGTGGTACTAATCGT 57.575 50.000 12.18 0.00 39.52 3.73
3770 5224 4.698780 TGATATCCGAGGTGGTACTAATCG 59.301 45.833 0.00 7.79 39.52 3.34
3771 5225 6.208994 ACTTGATATCCGAGGTGGTACTAATC 59.791 42.308 0.00 0.00 39.52 1.75
3772 5226 6.075984 ACTTGATATCCGAGGTGGTACTAAT 58.924 40.000 0.00 0.00 39.52 1.73
3773 5227 5.452255 ACTTGATATCCGAGGTGGTACTAA 58.548 41.667 0.00 0.00 39.52 2.24
3774 5228 5.057843 ACTTGATATCCGAGGTGGTACTA 57.942 43.478 0.00 0.00 39.52 1.82
3775 5229 3.890147 GACTTGATATCCGAGGTGGTACT 59.110 47.826 0.00 0.00 39.52 2.73
3776 5230 3.005578 GGACTTGATATCCGAGGTGGTAC 59.994 52.174 0.00 0.00 39.52 3.34
3777 5231 3.117246 AGGACTTGATATCCGAGGTGGTA 60.117 47.826 0.00 0.00 41.52 3.25
3778 5232 2.040178 GGACTTGATATCCGAGGTGGT 58.960 52.381 0.00 0.00 39.52 4.16
3779 5233 2.297597 GAGGACTTGATATCCGAGGTGG 59.702 54.545 0.00 0.00 41.52 4.61
3780 5234 2.297597 GGAGGACTTGATATCCGAGGTG 59.702 54.545 0.00 0.00 41.52 4.00
3781 5235 2.178106 AGGAGGACTTGATATCCGAGGT 59.822 50.000 0.00 0.00 41.52 3.85
3782 5236 2.823154 GAGGAGGACTTGATATCCGAGG 59.177 54.545 0.00 0.00 41.52 4.63
3783 5237 2.823154 GGAGGAGGACTTGATATCCGAG 59.177 54.545 0.00 1.08 41.52 4.63
3784 5238 2.177016 TGGAGGAGGACTTGATATCCGA 59.823 50.000 0.00 0.00 41.52 4.55
3785 5239 2.598565 TGGAGGAGGACTTGATATCCG 58.401 52.381 0.00 0.00 41.52 4.18
3786 5240 4.227197 TCTTGGAGGAGGACTTGATATCC 58.773 47.826 0.00 0.00 36.38 2.59
3787 5241 5.878406 TTCTTGGAGGAGGACTTGATATC 57.122 43.478 0.00 0.00 0.00 1.63
3788 5242 5.966935 TCTTTCTTGGAGGAGGACTTGATAT 59.033 40.000 0.00 0.00 0.00 1.63
3789 5243 5.342017 TCTTTCTTGGAGGAGGACTTGATA 58.658 41.667 0.00 0.00 0.00 2.15
3790 5244 4.171234 TCTTTCTTGGAGGAGGACTTGAT 58.829 43.478 0.00 0.00 0.00 2.57
3791 5245 3.587498 TCTTTCTTGGAGGAGGACTTGA 58.413 45.455 0.00 0.00 0.00 3.02
3792 5246 4.357918 TTCTTTCTTGGAGGAGGACTTG 57.642 45.455 0.00 0.00 0.00 3.16
3793 5247 4.413851 ACTTTCTTTCTTGGAGGAGGACTT 59.586 41.667 0.00 0.00 0.00 3.01
3794 5248 3.977326 ACTTTCTTTCTTGGAGGAGGACT 59.023 43.478 0.00 0.00 0.00 3.85
3795 5249 4.359434 ACTTTCTTTCTTGGAGGAGGAC 57.641 45.455 0.00 0.00 0.00 3.85
4252 5707 2.130073 GAGCCGGGCACAACTTGTTC 62.130 60.000 23.09 2.30 0.00 3.18
4448 5903 9.075519 CGTTATTGTGAGAATATTTTGCAACAT 57.924 29.630 0.00 0.00 0.00 2.71
4449 5904 7.061673 GCGTTATTGTGAGAATATTTTGCAACA 59.938 33.333 0.00 0.00 0.00 3.33
4450 5905 7.383361 GCGTTATTGTGAGAATATTTTGCAAC 58.617 34.615 0.00 0.00 0.00 4.17
4451 5906 6.250315 CGCGTTATTGTGAGAATATTTTGCAA 59.750 34.615 0.00 0.00 0.00 4.08
4452 5907 5.736824 CGCGTTATTGTGAGAATATTTTGCA 59.263 36.000 0.00 0.00 0.00 4.08
4453 5908 5.737290 ACGCGTTATTGTGAGAATATTTTGC 59.263 36.000 5.58 0.00 0.00 3.68
4454 5909 6.194508 CCACGCGTTATTGTGAGAATATTTTG 59.805 38.462 10.22 0.00 38.36 2.44
4455 5910 6.255215 CCACGCGTTATTGTGAGAATATTTT 58.745 36.000 10.22 0.00 38.36 1.82
4456 5911 5.220777 CCCACGCGTTATTGTGAGAATATTT 60.221 40.000 10.22 0.00 38.36 1.40
4457 5912 4.272504 CCCACGCGTTATTGTGAGAATATT 59.727 41.667 10.22 0.00 38.36 1.28
4458 5913 3.807622 CCCACGCGTTATTGTGAGAATAT 59.192 43.478 10.22 0.00 38.36 1.28
4459 5914 3.191669 CCCACGCGTTATTGTGAGAATA 58.808 45.455 10.22 0.00 38.36 1.75
4460 5915 2.006888 CCCACGCGTTATTGTGAGAAT 58.993 47.619 10.22 0.00 38.36 2.40
4461 5916 1.434555 CCCACGCGTTATTGTGAGAA 58.565 50.000 10.22 0.00 38.36 2.87
4462 5917 0.390603 CCCCACGCGTTATTGTGAGA 60.391 55.000 10.22 0.00 38.36 3.27
4463 5918 0.672401 ACCCCACGCGTTATTGTGAG 60.672 55.000 10.22 0.00 38.36 3.51
4464 5919 0.607112 TACCCCACGCGTTATTGTGA 59.393 50.000 10.22 0.00 38.36 3.58
4465 5920 1.595794 GATACCCCACGCGTTATTGTG 59.404 52.381 10.22 0.00 35.87 3.33
4466 5921 1.207570 TGATACCCCACGCGTTATTGT 59.792 47.619 10.22 7.40 0.00 2.71
4467 5922 1.942677 TGATACCCCACGCGTTATTG 58.057 50.000 10.22 0.00 0.00 1.90
4468 5923 2.367567 AGATGATACCCCACGCGTTATT 59.632 45.455 10.22 0.00 0.00 1.40
4469 5924 1.968493 AGATGATACCCCACGCGTTAT 59.032 47.619 10.22 4.63 0.00 1.89
4470 5925 1.405872 AGATGATACCCCACGCGTTA 58.594 50.000 10.22 0.00 0.00 3.18
4471 5926 1.340248 CTAGATGATACCCCACGCGTT 59.660 52.381 10.22 0.00 0.00 4.84
4472 5927 0.959553 CTAGATGATACCCCACGCGT 59.040 55.000 5.58 5.58 0.00 6.01
4473 5928 0.959553 ACTAGATGATACCCCACGCG 59.040 55.000 3.53 3.53 0.00 6.01
4474 5929 4.202182 TGTTAACTAGATGATACCCCACGC 60.202 45.833 7.22 0.00 0.00 5.34
4475 5930 5.524971 TGTTAACTAGATGATACCCCACG 57.475 43.478 7.22 0.00 0.00 4.94
4492 5947 9.550406 CCCAACCTCGTTTCTATATAATGTTAA 57.450 33.333 0.00 0.00 0.00 2.01
4493 5948 8.707449 ACCCAACCTCGTTTCTATATAATGTTA 58.293 33.333 0.00 0.00 0.00 2.41
4494 5949 7.571025 ACCCAACCTCGTTTCTATATAATGTT 58.429 34.615 0.00 0.00 0.00 2.71
4495 5950 7.070821 AGACCCAACCTCGTTTCTATATAATGT 59.929 37.037 0.00 0.00 0.00 2.71
4496 5951 7.442656 AGACCCAACCTCGTTTCTATATAATG 58.557 38.462 0.00 0.00 0.00 1.90
4497 5952 7.613551 AGACCCAACCTCGTTTCTATATAAT 57.386 36.000 0.00 0.00 0.00 1.28
4498 5953 7.427989 AAGACCCAACCTCGTTTCTATATAA 57.572 36.000 0.00 0.00 0.00 0.98
4499 5954 7.427989 AAAGACCCAACCTCGTTTCTATATA 57.572 36.000 0.00 0.00 0.00 0.86
4500 5955 5.952347 AAGACCCAACCTCGTTTCTATAT 57.048 39.130 0.00 0.00 0.00 0.86
4501 5956 5.750352 AAAGACCCAACCTCGTTTCTATA 57.250 39.130 0.00 0.00 0.00 1.31
4502 5957 4.635699 AAAGACCCAACCTCGTTTCTAT 57.364 40.909 0.00 0.00 0.00 1.98
4503 5958 4.426736 AAAAGACCCAACCTCGTTTCTA 57.573 40.909 0.00 0.00 0.00 2.10
4504 5959 3.292492 AAAAGACCCAACCTCGTTTCT 57.708 42.857 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.