Multiple sequence alignment - TraesCS6B01G070500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G070500 | chr6B | 100.000 | 9099 | 0 | 0 | 1 | 9099 | 47144974 | 47135876 | 0.000000e+00 | 16803.0 |
1 | TraesCS6B01G070500 | chr6B | 92.953 | 2242 | 134 | 15 | 80 | 2310 | 46965988 | 46963760 | 0.000000e+00 | 3243.0 |
2 | TraesCS6B01G070500 | chr6B | 84.496 | 3296 | 397 | 69 | 5530 | 8775 | 46925236 | 46922005 | 0.000000e+00 | 3151.0 |
3 | TraesCS6B01G070500 | chr6B | 82.580 | 2612 | 379 | 54 | 5521 | 8089 | 47091456 | 47088878 | 0.000000e+00 | 2233.0 |
4 | TraesCS6B01G070500 | chr6B | 82.742 | 2283 | 352 | 29 | 4273 | 6520 | 46846500 | 46848775 | 0.000000e+00 | 1995.0 |
5 | TraesCS6B01G070500 | chr6B | 84.809 | 1942 | 249 | 21 | 204 | 2111 | 46929501 | 46927572 | 0.000000e+00 | 1910.0 |
6 | TraesCS6B01G070500 | chr6B | 86.605 | 1732 | 208 | 12 | 346 | 2061 | 46951212 | 46949489 | 0.000000e+00 | 1892.0 |
7 | TraesCS6B01G070500 | chr6B | 93.012 | 1245 | 79 | 6 | 4273 | 5517 | 46961569 | 46960333 | 0.000000e+00 | 1810.0 |
8 | TraesCS6B01G070500 | chr6B | 91.894 | 1209 | 51 | 21 | 2794 | 3982 | 46963160 | 46961979 | 0.000000e+00 | 1646.0 |
9 | TraesCS6B01G070500 | chr6B | 86.088 | 1301 | 162 | 17 | 976 | 2266 | 47271398 | 47270107 | 0.000000e+00 | 1382.0 |
10 | TraesCS6B01G070500 | chr6B | 87.578 | 958 | 117 | 2 | 5521 | 6477 | 46960290 | 46959334 | 0.000000e+00 | 1109.0 |
11 | TraesCS6B01G070500 | chr6B | 83.139 | 1198 | 193 | 6 | 4330 | 5521 | 47280352 | 47279158 | 0.000000e+00 | 1085.0 |
12 | TraesCS6B01G070500 | chr6B | 79.960 | 1517 | 237 | 42 | 6481 | 7957 | 47278191 | 47276702 | 0.000000e+00 | 1055.0 |
13 | TraesCS6B01G070500 | chr6B | 82.590 | 1189 | 198 | 7 | 4339 | 5521 | 46926469 | 46925284 | 0.000000e+00 | 1040.0 |
14 | TraesCS6B01G070500 | chr6B | 81.900 | 1221 | 188 | 24 | 6764 | 7964 | 47232310 | 47231103 | 0.000000e+00 | 1000.0 |
15 | TraesCS6B01G070500 | chr6B | 79.639 | 1331 | 224 | 32 | 6655 | 7961 | 46848827 | 46850134 | 0.000000e+00 | 913.0 |
16 | TraesCS6B01G070500 | chr6B | 78.804 | 1354 | 217 | 45 | 6763 | 8088 | 47258106 | 47256795 | 0.000000e+00 | 846.0 |
17 | TraesCS6B01G070500 | chr6B | 80.299 | 1137 | 188 | 29 | 6844 | 7961 | 46788764 | 46789883 | 0.000000e+00 | 826.0 |
18 | TraesCS6B01G070500 | chr6B | 79.284 | 1173 | 212 | 19 | 6782 | 7939 | 46768526 | 46769682 | 0.000000e+00 | 791.0 |
19 | TraesCS6B01G070500 | chr6B | 79.547 | 1149 | 189 | 33 | 6812 | 7943 | 46941237 | 46940118 | 0.000000e+00 | 778.0 |
20 | TraesCS6B01G070500 | chr6B | 91.717 | 495 | 30 | 6 | 2307 | 2794 | 46963706 | 46963216 | 0.000000e+00 | 676.0 |
21 | TraesCS6B01G070500 | chr6B | 94.444 | 234 | 5 | 4 | 3966 | 4191 | 46961801 | 46961568 | 4.040000e-93 | 353.0 |
22 | TraesCS6B01G070500 | chr6B | 88.776 | 196 | 22 | 0 | 61 | 256 | 46966090 | 46965895 | 3.280000e-59 | 241.0 |
23 | TraesCS6B01G070500 | chr6B | 96.774 | 93 | 2 | 1 | 4182 | 4274 | 96970851 | 96970760 | 4.400000e-33 | 154.0 |
24 | TraesCS6B01G070500 | chr6A | 95.196 | 1790 | 70 | 7 | 314 | 2095 | 27013471 | 27011690 | 0.000000e+00 | 2815.0 |
25 | TraesCS6B01G070500 | chr6A | 82.355 | 2539 | 373 | 46 | 5587 | 8092 | 27059796 | 27057300 | 0.000000e+00 | 2137.0 |
26 | TraesCS6B01G070500 | chr6A | 86.090 | 1596 | 199 | 12 | 531 | 2111 | 27072605 | 27071018 | 0.000000e+00 | 1696.0 |
27 | TraesCS6B01G070500 | chr6A | 92.789 | 1151 | 78 | 3 | 964 | 2111 | 27108818 | 27107670 | 0.000000e+00 | 1661.0 |
28 | TraesCS6B01G070500 | chr6A | 87.280 | 967 | 113 | 8 | 5521 | 6484 | 27105240 | 27104281 | 0.000000e+00 | 1096.0 |
29 | TraesCS6B01G070500 | chr6A | 82.334 | 1217 | 188 | 20 | 6763 | 7964 | 27101271 | 27100067 | 0.000000e+00 | 1031.0 |
30 | TraesCS6B01G070500 | chr6A | 82.422 | 1189 | 200 | 7 | 4339 | 5521 | 27062362 | 27061177 | 0.000000e+00 | 1029.0 |
31 | TraesCS6B01G070500 | chr6A | 82.383 | 1192 | 197 | 10 | 4327 | 5510 | 26962840 | 26964026 | 0.000000e+00 | 1026.0 |
32 | TraesCS6B01G070500 | chr6A | 81.314 | 1263 | 197 | 23 | 6719 | 7964 | 27084413 | 27083173 | 0.000000e+00 | 989.0 |
33 | TraesCS6B01G070500 | chr6A | 79.275 | 1351 | 214 | 38 | 6697 | 8027 | 26966512 | 26967816 | 0.000000e+00 | 883.0 |
34 | TraesCS6B01G070500 | chr6A | 85.740 | 561 | 64 | 8 | 4 | 562 | 27020370 | 27019824 | 6.130000e-161 | 579.0 |
35 | TraesCS6B01G070500 | chrUn | 82.431 | 2624 | 373 | 55 | 5521 | 8089 | 96216613 | 96214023 | 0.000000e+00 | 2211.0 |
36 | TraesCS6B01G070500 | chrUn | 82.797 | 2267 | 322 | 44 | 5521 | 7756 | 96297243 | 96295014 | 0.000000e+00 | 1964.0 |
37 | TraesCS6B01G070500 | chrUn | 88.514 | 1245 | 138 | 3 | 867 | 2111 | 96160333 | 96159094 | 0.000000e+00 | 1502.0 |
38 | TraesCS6B01G070500 | chrUn | 84.452 | 1460 | 208 | 15 | 666 | 2121 | 95763271 | 95764715 | 0.000000e+00 | 1421.0 |
39 | TraesCS6B01G070500 | chrUn | 88.020 | 1202 | 134 | 7 | 867 | 2061 | 96232337 | 96231139 | 0.000000e+00 | 1413.0 |
40 | TraesCS6B01G070500 | chrUn | 87.105 | 1233 | 149 | 6 | 860 | 2086 | 96220267 | 96219039 | 0.000000e+00 | 1387.0 |
41 | TraesCS6B01G070500 | chrUn | 87.302 | 1071 | 126 | 8 | 5530 | 6590 | 96155126 | 96154056 | 0.000000e+00 | 1216.0 |
42 | TraesCS6B01G070500 | chrUn | 85.165 | 1119 | 147 | 15 | 5521 | 6627 | 96125274 | 96124163 | 0.000000e+00 | 1129.0 |
43 | TraesCS6B01G070500 | chrUn | 85.199 | 1081 | 149 | 9 | 5521 | 6590 | 96228979 | 96227899 | 0.000000e+00 | 1099.0 |
44 | TraesCS6B01G070500 | chrUn | 82.065 | 1288 | 199 | 24 | 6854 | 8119 | 95712139 | 95713416 | 0.000000e+00 | 1070.0 |
45 | TraesCS6B01G070500 | chrUn | 82.594 | 1195 | 205 | 1 | 4330 | 5521 | 96156368 | 96155174 | 0.000000e+00 | 1051.0 |
46 | TraesCS6B01G070500 | chrUn | 82.605 | 1190 | 198 | 7 | 4327 | 5510 | 95818128 | 95819314 | 0.000000e+00 | 1042.0 |
47 | TraesCS6B01G070500 | chrUn | 82.456 | 1197 | 203 | 4 | 4330 | 5521 | 96298476 | 96297282 | 0.000000e+00 | 1040.0 |
48 | TraesCS6B01G070500 | chrUn | 80.650 | 1323 | 201 | 41 | 6655 | 7955 | 95987975 | 95989264 | 0.000000e+00 | 974.0 |
49 | TraesCS6B01G070500 | chrUn | 81.424 | 1222 | 194 | 22 | 6763 | 7964 | 96227662 | 96226454 | 0.000000e+00 | 968.0 |
50 | TraesCS6B01G070500 | chrUn | 84.934 | 989 | 105 | 27 | 275 | 1229 | 96182050 | 96181072 | 0.000000e+00 | 961.0 |
51 | TraesCS6B01G070500 | chrUn | 81.034 | 1160 | 187 | 22 | 6763 | 7902 | 96153826 | 96152680 | 0.000000e+00 | 893.0 |
52 | TraesCS6B01G070500 | chrUn | 81.699 | 1071 | 166 | 22 | 6697 | 7747 | 95822863 | 95823923 | 0.000000e+00 | 865.0 |
53 | TraesCS6B01G070500 | chrUn | 79.966 | 1173 | 204 | 18 | 6782 | 7939 | 95977047 | 95978203 | 0.000000e+00 | 835.0 |
54 | TraesCS6B01G070500 | chrUn | 88.131 | 337 | 33 | 5 | 8136 | 8466 | 96122424 | 96122089 | 2.380000e-105 | 394.0 |
55 | TraesCS6B01G070500 | chrUn | 86.411 | 287 | 35 | 4 | 7701 | 7985 | 95736206 | 95736490 | 2.470000e-80 | 311.0 |
56 | TraesCS6B01G070500 | chrUn | 91.209 | 182 | 14 | 2 | 1 | 181 | 96182656 | 96182476 | 7.060000e-61 | 246.0 |
57 | TraesCS6B01G070500 | chrUn | 90.506 | 158 | 14 | 1 | 179 | 336 | 96182202 | 96182046 | 3.330000e-49 | 207.0 |
58 | TraesCS6B01G070500 | chrUn | 77.714 | 350 | 64 | 10 | 7483 | 7831 | 96122898 | 96122562 | 1.550000e-47 | 202.0 |
59 | TraesCS6B01G070500 | chrUn | 97.727 | 88 | 2 | 0 | 4187 | 4274 | 224653306 | 224653393 | 1.580000e-32 | 152.0 |
60 | TraesCS6B01G070500 | chrUn | 81.026 | 195 | 15 | 7 | 8792 | 8986 | 95713713 | 95713885 | 1.590000e-27 | 135.0 |
61 | TraesCS6B01G070500 | chrUn | 82.119 | 151 | 25 | 2 | 6808 | 6957 | 95802299 | 95802448 | 2.670000e-25 | 128.0 |
62 | TraesCS6B01G070500 | chrUn | 92.105 | 76 | 6 | 0 | 8052 | 8127 | 96122472 | 96122397 | 3.470000e-19 | 108.0 |
63 | TraesCS6B01G070500 | chrUn | 88.889 | 63 | 4 | 2 | 8297 | 8356 | 95989636 | 95989698 | 3.520000e-09 | 75.0 |
64 | TraesCS6B01G070500 | chrUn | 77.519 | 129 | 17 | 10 | 6586 | 6704 | 95820385 | 95820511 | 5.900000e-07 | 67.6 |
65 | TraesCS6B01G070500 | chr3D | 95.833 | 96 | 3 | 1 | 4187 | 4282 | 264143644 | 264143550 | 4.400000e-33 | 154.0 |
66 | TraesCS6B01G070500 | chr4B | 91.892 | 111 | 6 | 3 | 4181 | 4289 | 187091159 | 187091050 | 1.580000e-32 | 152.0 |
67 | TraesCS6B01G070500 | chr3B | 96.739 | 92 | 2 | 1 | 4189 | 4279 | 3660770 | 3660861 | 1.580000e-32 | 152.0 |
68 | TraesCS6B01G070500 | chr7D | 93.939 | 99 | 6 | 0 | 4186 | 4284 | 506141365 | 506141463 | 5.690000e-32 | 150.0 |
69 | TraesCS6B01G070500 | chr5D | 95.745 | 94 | 3 | 1 | 4187 | 4279 | 504793019 | 504792926 | 5.690000e-32 | 150.0 |
70 | TraesCS6B01G070500 | chr5B | 91.346 | 104 | 7 | 2 | 4183 | 4285 | 496801834 | 496801936 | 3.430000e-29 | 141.0 |
71 | TraesCS6B01G070500 | chr5B | 87.097 | 124 | 10 | 6 | 4157 | 4277 | 331754406 | 331754286 | 1.590000e-27 | 135.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G070500 | chr6B | 47135876 | 47144974 | 9098 | True | 16803.000000 | 16803 | 100.000000 | 1 | 9099 | 1 | chr6B.!!$R4 | 9098 |
1 | TraesCS6B01G070500 | chr6B | 47088878 | 47091456 | 2578 | True | 2233.000000 | 2233 | 82.580000 | 5521 | 8089 | 1 | chr6B.!!$R3 | 2568 |
2 | TraesCS6B01G070500 | chr6B | 46922005 | 46929501 | 7496 | True | 2033.666667 | 3151 | 83.965000 | 204 | 8775 | 3 | chr6B.!!$R9 | 8571 |
3 | TraesCS6B01G070500 | chr6B | 46949489 | 46951212 | 1723 | True | 1892.000000 | 1892 | 86.605000 | 346 | 2061 | 1 | chr6B.!!$R2 | 1715 |
4 | TraesCS6B01G070500 | chr6B | 46846500 | 46850134 | 3634 | False | 1454.000000 | 1995 | 81.190500 | 4273 | 7961 | 2 | chr6B.!!$F3 | 3688 |
5 | TraesCS6B01G070500 | chr6B | 47270107 | 47271398 | 1291 | True | 1382.000000 | 1382 | 86.088000 | 976 | 2266 | 1 | chr6B.!!$R7 | 1290 |
6 | TraesCS6B01G070500 | chr6B | 46959334 | 46966090 | 6756 | True | 1296.857143 | 3243 | 91.482000 | 61 | 6477 | 7 | chr6B.!!$R10 | 6416 |
7 | TraesCS6B01G070500 | chr6B | 47276702 | 47280352 | 3650 | True | 1070.000000 | 1085 | 81.549500 | 4330 | 7957 | 2 | chr6B.!!$R11 | 3627 |
8 | TraesCS6B01G070500 | chr6B | 47231103 | 47232310 | 1207 | True | 1000.000000 | 1000 | 81.900000 | 6764 | 7964 | 1 | chr6B.!!$R5 | 1200 |
9 | TraesCS6B01G070500 | chr6B | 47256795 | 47258106 | 1311 | True | 846.000000 | 846 | 78.804000 | 6763 | 8088 | 1 | chr6B.!!$R6 | 1325 |
10 | TraesCS6B01G070500 | chr6B | 46788764 | 46789883 | 1119 | False | 826.000000 | 826 | 80.299000 | 6844 | 7961 | 1 | chr6B.!!$F2 | 1117 |
11 | TraesCS6B01G070500 | chr6B | 46768526 | 46769682 | 1156 | False | 791.000000 | 791 | 79.284000 | 6782 | 7939 | 1 | chr6B.!!$F1 | 1157 |
12 | TraesCS6B01G070500 | chr6B | 46940118 | 46941237 | 1119 | True | 778.000000 | 778 | 79.547000 | 6812 | 7943 | 1 | chr6B.!!$R1 | 1131 |
13 | TraesCS6B01G070500 | chr6A | 27011690 | 27013471 | 1781 | True | 2815.000000 | 2815 | 95.196000 | 314 | 2095 | 1 | chr6A.!!$R1 | 1781 |
14 | TraesCS6B01G070500 | chr6A | 27071018 | 27072605 | 1587 | True | 1696.000000 | 1696 | 86.090000 | 531 | 2111 | 1 | chr6A.!!$R3 | 1580 |
15 | TraesCS6B01G070500 | chr6A | 27057300 | 27062362 | 5062 | True | 1583.000000 | 2137 | 82.388500 | 4339 | 8092 | 2 | chr6A.!!$R5 | 3753 |
16 | TraesCS6B01G070500 | chr6A | 27100067 | 27108818 | 8751 | True | 1262.666667 | 1661 | 87.467667 | 964 | 7964 | 3 | chr6A.!!$R6 | 7000 |
17 | TraesCS6B01G070500 | chr6A | 27083173 | 27084413 | 1240 | True | 989.000000 | 989 | 81.314000 | 6719 | 7964 | 1 | chr6A.!!$R4 | 1245 |
18 | TraesCS6B01G070500 | chr6A | 26962840 | 26967816 | 4976 | False | 954.500000 | 1026 | 80.829000 | 4327 | 8027 | 2 | chr6A.!!$F1 | 3700 |
19 | TraesCS6B01G070500 | chr6A | 27019824 | 27020370 | 546 | True | 579.000000 | 579 | 85.740000 | 4 | 562 | 1 | chr6A.!!$R2 | 558 |
20 | TraesCS6B01G070500 | chrUn | 96214023 | 96220267 | 6244 | True | 1799.000000 | 2211 | 84.768000 | 860 | 8089 | 2 | chrUn.!!$R4 | 7229 |
21 | TraesCS6B01G070500 | chrUn | 96295014 | 96298476 | 3462 | True | 1502.000000 | 1964 | 82.626500 | 4330 | 7756 | 2 | chrUn.!!$R6 | 3426 |
22 | TraesCS6B01G070500 | chrUn | 95763271 | 95764715 | 1444 | False | 1421.000000 | 1421 | 84.452000 | 666 | 2121 | 1 | chrUn.!!$F2 | 1455 |
23 | TraesCS6B01G070500 | chrUn | 96152680 | 96160333 | 7653 | True | 1165.500000 | 1502 | 84.861000 | 867 | 7902 | 4 | chrUn.!!$R2 | 7035 |
24 | TraesCS6B01G070500 | chrUn | 96226454 | 96232337 | 5883 | True | 1160.000000 | 1413 | 84.881000 | 867 | 7964 | 3 | chrUn.!!$R5 | 7097 |
25 | TraesCS6B01G070500 | chrUn | 95977047 | 95978203 | 1156 | False | 835.000000 | 835 | 79.966000 | 6782 | 7939 | 1 | chrUn.!!$F4 | 1157 |
26 | TraesCS6B01G070500 | chrUn | 95818128 | 95823923 | 5795 | False | 658.200000 | 1042 | 80.607667 | 4327 | 7747 | 3 | chrUn.!!$F7 | 3420 |
27 | TraesCS6B01G070500 | chrUn | 95712139 | 95713885 | 1746 | False | 602.500000 | 1070 | 81.545500 | 6854 | 8986 | 2 | chrUn.!!$F6 | 2132 |
28 | TraesCS6B01G070500 | chrUn | 95987975 | 95989698 | 1723 | False | 524.500000 | 974 | 84.769500 | 6655 | 8356 | 2 | chrUn.!!$F8 | 1701 |
29 | TraesCS6B01G070500 | chrUn | 96181072 | 96182656 | 1584 | True | 471.333333 | 961 | 88.883000 | 1 | 1229 | 3 | chrUn.!!$R3 | 1228 |
30 | TraesCS6B01G070500 | chrUn | 96122089 | 96125274 | 3185 | True | 458.250000 | 1129 | 85.778750 | 5521 | 8466 | 4 | chrUn.!!$R1 | 2945 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
467 | 914 | 1.059584 | TCAAGGGTGCAAGAGGGACA | 61.060 | 55.000 | 0.00 | 0.00 | 40.06 | 4.02 | F |
1069 | 1581 | 1.098129 | CGAGATGGTGAGCGGAGAGA | 61.098 | 60.000 | 0.00 | 0.00 | 0.00 | 3.10 | F |
2679 | 3608 | 0.963962 | GTCACCTCGGGAACACACTA | 59.036 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 | F |
2746 | 3675 | 0.390124 | AGTAGTTGGCGTCGGAACAA | 59.610 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 | F |
3924 | 5202 | 0.244721 | GAAACCCTTCAGTGCCATGC | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 4.06 | F |
5020 | 8055 | 1.200020 | GCCTGGTGATTCTTTGGTTCG | 59.800 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 | F |
6291 | 10642 | 1.153168 | GCTTCCATAGCTGCGGGAA | 60.153 | 57.895 | 17.94 | 17.94 | 46.77 | 3.97 | F |
7416 | 17109 | 0.029267 | ATCTTCCAGGGGGCTGAGAT | 60.029 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1573 | 2085 | 0.251341 | ATGTTGGTGTTGCCCTCCTC | 60.251 | 55.0 | 0.00 | 0.00 | 36.04 | 3.71 | R |
2719 | 3648 | 0.602905 | ACGCCAACTACTGACAAGCC | 60.603 | 55.0 | 0.00 | 0.00 | 0.00 | 4.35 | R |
3492 | 4724 | 0.396435 | TTGGTGCAGTGGTAGAGGTG | 59.604 | 55.0 | 0.00 | 0.00 | 0.00 | 4.00 | R |
4063 | 7055 | 1.251355 | CGAGACGTTGATGTGAGTCG | 58.749 | 55.0 | 0.00 | 0.00 | 38.53 | 4.18 | R |
5784 | 10135 | 0.179000 | GGACTGTGCTGATGGTAGGG | 59.821 | 60.0 | 0.00 | 0.00 | 0.00 | 3.53 | R |
6670 | 13906 | 0.532115 | CATTGGCCAACAGTTAGCCC | 59.468 | 55.0 | 23.27 | 4.92 | 46.55 | 5.19 | R |
8013 | 18024 | 0.519077 | GCCTGTTGCAGCTACTTCAC | 59.481 | 55.0 | 8.50 | 0.00 | 40.77 | 3.18 | R |
9012 | 19180 | 0.108424 | ACGGAGCTCTGAGTTGATGC | 60.108 | 55.0 | 29.29 | 0.00 | 0.00 | 3.91 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
72 | 75 | 4.600012 | ACTGCAGCATCGTTAACATTAC | 57.400 | 40.909 | 15.27 | 0.00 | 0.00 | 1.89 |
93 | 96 | 4.023980 | ACGAATTGTGGATCTAGAGGTGA | 58.976 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
94 | 97 | 4.466370 | ACGAATTGTGGATCTAGAGGTGAA | 59.534 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
97 | 100 | 7.147724 | ACGAATTGTGGATCTAGAGGTGAATTA | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
98 | 101 | 7.383572 | CGAATTGTGGATCTAGAGGTGAATTAG | 59.616 | 40.741 | 0.00 | 0.00 | 0.00 | 1.73 |
142 | 145 | 1.709578 | TGAATCTCGAGCTATGGCCT | 58.290 | 50.000 | 7.81 | 0.00 | 39.73 | 5.19 |
201 | 481 | 4.772886 | AAGGTTAATTAGCCCTCGATGT | 57.227 | 40.909 | 14.20 | 0.00 | 0.00 | 3.06 |
220 | 500 | 7.909267 | TCGATGTCTGTTAAAATATCAAGCTG | 58.091 | 34.615 | 0.00 | 0.00 | 0.00 | 4.24 |
221 | 501 | 6.630443 | CGATGTCTGTTAAAATATCAAGCTGC | 59.370 | 38.462 | 0.00 | 0.00 | 0.00 | 5.25 |
256 | 620 | 2.657372 | CGGATTTAGCGCGAATCTAGAC | 59.343 | 50.000 | 27.06 | 15.93 | 34.65 | 2.59 |
359 | 792 | 3.455910 | CCTCCCAATACAAGTCCATCTCA | 59.544 | 47.826 | 0.00 | 0.00 | 0.00 | 3.27 |
415 | 852 | 1.303309 | AGCCGTTCTGCATCATTAGC | 58.697 | 50.000 | 0.00 | 0.00 | 0.00 | 3.09 |
450 | 897 | 9.170890 | ACCATAAATATTTCTCTACCCATCTCA | 57.829 | 33.333 | 3.39 | 0.00 | 0.00 | 3.27 |
467 | 914 | 1.059584 | TCAAGGGTGCAAGAGGGACA | 61.060 | 55.000 | 0.00 | 0.00 | 40.06 | 4.02 |
469 | 916 | 1.352622 | AAGGGTGCAAGAGGGACACA | 61.353 | 55.000 | 0.00 | 0.00 | 44.99 | 3.72 |
697 | 1160 | 8.448816 | AGCTAATTTCCCTTTGGCTTATATACT | 58.551 | 33.333 | 0.00 | 0.00 | 37.60 | 2.12 |
735 | 1204 | 5.779529 | TTTAGAACTTCACCAGTACGAGT | 57.220 | 39.130 | 0.00 | 0.00 | 32.94 | 4.18 |
737 | 1206 | 6.492007 | TTAGAACTTCACCAGTACGAGTAG | 57.508 | 41.667 | 0.00 | 0.00 | 32.94 | 2.57 |
738 | 1207 | 3.190953 | AGAACTTCACCAGTACGAGTAGC | 59.809 | 47.826 | 0.00 | 0.00 | 32.94 | 3.58 |
739 | 1208 | 2.511659 | ACTTCACCAGTACGAGTAGCA | 58.488 | 47.619 | 0.00 | 0.00 | 31.97 | 3.49 |
740 | 1209 | 2.488545 | ACTTCACCAGTACGAGTAGCAG | 59.511 | 50.000 | 0.00 | 0.00 | 31.97 | 4.24 |
741 | 1210 | 1.460504 | TCACCAGTACGAGTAGCAGG | 58.539 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
742 | 1211 | 1.174783 | CACCAGTACGAGTAGCAGGT | 58.825 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
853 | 1327 | 5.519722 | AGTTTGCCTATTTCTGTTGTTTCG | 58.480 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
862 | 1336 | 3.536158 | TCTGTTGTTTCGCATGCTTAC | 57.464 | 42.857 | 17.13 | 11.03 | 0.00 | 2.34 |
1069 | 1581 | 1.098129 | CGAGATGGTGAGCGGAGAGA | 61.098 | 60.000 | 0.00 | 0.00 | 0.00 | 3.10 |
1198 | 1710 | 4.641645 | TGCAAGAGTGGGTGGCCG | 62.642 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
1573 | 2085 | 6.200665 | GCTAGTTGAGATTATGCTGAGTGAAG | 59.799 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
1677 | 2193 | 7.430502 | GTCTTTAATGATGAAGCCTTGAATTCG | 59.569 | 37.037 | 0.04 | 0.00 | 0.00 | 3.34 |
1907 | 2426 | 2.603075 | AAAGCACCCTTGGCTAATGA | 57.397 | 45.000 | 0.00 | 0.00 | 41.66 | 2.57 |
2130 | 2678 | 3.116096 | AGGCTACTCATAGTGGGTTGA | 57.884 | 47.619 | 0.00 | 0.00 | 30.82 | 3.18 |
2203 | 2757 | 8.394121 | GTTTTCAGAGATTTGTATCTTAGCCAG | 58.606 | 37.037 | 0.00 | 0.00 | 41.23 | 4.85 |
2229 | 2783 | 7.599630 | TCCATTTAATAAGTTGTACCGTCAC | 57.400 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2261 | 2815 | 7.681939 | TTTGTATGGTGTCACCTTAGATTTC | 57.318 | 36.000 | 22.56 | 9.00 | 39.58 | 2.17 |
2264 | 2818 | 7.458397 | TGTATGGTGTCACCTTAGATTTCTTT | 58.542 | 34.615 | 22.56 | 0.00 | 39.58 | 2.52 |
2272 | 2826 | 4.766891 | CACCTTAGATTTCTTTCCAAGGCA | 59.233 | 41.667 | 6.73 | 0.00 | 36.77 | 4.75 |
2276 | 2830 | 4.198028 | AGATTTCTTTCCAAGGCATTGC | 57.802 | 40.909 | 5.36 | 0.00 | 34.91 | 3.56 |
2287 | 2841 | 2.549754 | CAAGGCATTGCGATAACTAGGG | 59.450 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2289 | 2843 | 2.969950 | AGGCATTGCGATAACTAGGGTA | 59.030 | 45.455 | 1.91 | 0.00 | 0.00 | 3.69 |
2356 | 3022 | 8.879342 | TTTTGAGGTTACAAAATGGTACATTG | 57.121 | 30.769 | 0.00 | 0.00 | 42.33 | 2.82 |
2385 | 3303 | 6.486657 | ACATGGACACTATAATTATGCCACAC | 59.513 | 38.462 | 8.28 | 0.00 | 0.00 | 3.82 |
2386 | 3304 | 5.995446 | TGGACACTATAATTATGCCACACA | 58.005 | 37.500 | 8.28 | 0.00 | 0.00 | 3.72 |
2390 | 3308 | 7.148154 | GGACACTATAATTATGCCACACAACAA | 60.148 | 37.037 | 8.28 | 0.00 | 0.00 | 2.83 |
2450 | 3374 | 2.623889 | ACAGTACTAAGCCTAGCCATCG | 59.376 | 50.000 | 0.00 | 0.00 | 0.00 | 3.84 |
2456 | 3380 | 3.388024 | ACTAAGCCTAGCCATCGAATTCA | 59.612 | 43.478 | 6.22 | 0.00 | 0.00 | 2.57 |
2462 | 3386 | 4.095483 | GCCTAGCCATCGAATTCATTATGG | 59.905 | 45.833 | 19.85 | 19.85 | 41.55 | 2.74 |
2541 | 3470 | 6.127869 | CCCACATGTATCATTTTTCGTGGTAA | 60.128 | 38.462 | 0.00 | 0.00 | 40.84 | 2.85 |
2554 | 3483 | 7.743520 | TTTTCGTGGTAAATTGAAAACAGTC | 57.256 | 32.000 | 0.00 | 0.00 | 35.91 | 3.51 |
2614 | 3543 | 5.590259 | AGTTGAGCACAAGAATTAAGTGTGT | 59.410 | 36.000 | 13.95 | 0.00 | 43.65 | 3.72 |
2678 | 3607 | 1.046472 | TGTCACCTCGGGAACACACT | 61.046 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2679 | 3608 | 0.963962 | GTCACCTCGGGAACACACTA | 59.036 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2686 | 3615 | 1.754803 | TCGGGAACACACTATAGCAGG | 59.245 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
2693 | 3622 | 2.101582 | ACACACTATAGCAGGCACTAGC | 59.898 | 50.000 | 0.00 | 0.00 | 36.02 | 3.42 |
2718 | 3647 | 1.338579 | GCCATCAGTAGGATAGCCTGC | 60.339 | 57.143 | 10.57 | 8.75 | 46.45 | 4.85 |
2736 | 3665 | 1.912371 | GCGGCTTGTCAGTAGTTGGC | 61.912 | 60.000 | 0.00 | 0.00 | 0.00 | 4.52 |
2742 | 3671 | 1.174078 | TGTCAGTAGTTGGCGTCGGA | 61.174 | 55.000 | 0.00 | 0.00 | 32.72 | 4.55 |
2746 | 3675 | 0.390124 | AGTAGTTGGCGTCGGAACAA | 59.610 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2749 | 3678 | 0.600255 | AGTTGGCGTCGGAACAAGAG | 60.600 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2756 | 3685 | 1.079621 | TCGGAACAAGAGGGCCCTA | 59.920 | 57.895 | 28.78 | 1.51 | 0.00 | 3.53 |
2760 | 3689 | 0.393132 | GAACAAGAGGGCCCTAGTGC | 60.393 | 60.000 | 28.78 | 18.94 | 0.00 | 4.40 |
2761 | 3690 | 1.133809 | AACAAGAGGGCCCTAGTGCA | 61.134 | 55.000 | 28.78 | 0.00 | 0.00 | 4.57 |
2781 | 3710 | 4.571984 | TGCATCGATCCTTGAATTGTACTG | 59.428 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
2782 | 3711 | 4.553547 | GCATCGATCCTTGAATTGTACTGC | 60.554 | 45.833 | 0.00 | 0.00 | 0.00 | 4.40 |
2783 | 3712 | 4.200838 | TCGATCCTTGAATTGTACTGCA | 57.799 | 40.909 | 0.00 | 0.00 | 0.00 | 4.41 |
2785 | 3714 | 4.811024 | TCGATCCTTGAATTGTACTGCATC | 59.189 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
2786 | 3715 | 4.813161 | CGATCCTTGAATTGTACTGCATCT | 59.187 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
2787 | 3716 | 5.985530 | CGATCCTTGAATTGTACTGCATCTA | 59.014 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2788 | 3717 | 6.145209 | CGATCCTTGAATTGTACTGCATCTAG | 59.855 | 42.308 | 0.00 | 0.00 | 0.00 | 2.43 |
2790 | 3719 | 7.418337 | TCCTTGAATTGTACTGCATCTAGTA | 57.582 | 36.000 | 0.00 | 0.00 | 32.19 | 1.82 |
2791 | 3720 | 8.023021 | TCCTTGAATTGTACTGCATCTAGTAT | 57.977 | 34.615 | 0.00 | 0.00 | 35.75 | 2.12 |
2792 | 3721 | 7.928167 | TCCTTGAATTGTACTGCATCTAGTATG | 59.072 | 37.037 | 0.00 | 0.00 | 35.75 | 2.39 |
2802 | 3785 | 5.163364 | ACTGCATCTAGTATGGAGTTTGGAG | 60.163 | 44.000 | 17.42 | 0.00 | 46.22 | 3.86 |
2814 | 3797 | 3.778629 | GGAGTTTGGAGTCCCCACTATAA | 59.221 | 47.826 | 6.74 | 0.00 | 46.62 | 0.98 |
2824 | 3807 | 3.965347 | GTCCCCACTATAACAGGAGCTAA | 59.035 | 47.826 | 0.00 | 0.00 | 0.00 | 3.09 |
2867 | 3850 | 9.296400 | CTCAAGCTACTAACAAAGATTAGTCTC | 57.704 | 37.037 | 1.59 | 0.00 | 42.98 | 3.36 |
2880 | 3865 | 5.757988 | AGATTAGTCTCGTCCCTAAACTCT | 58.242 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
2902 | 3887 | 3.450096 | TCTCATCCTCTGATCCACACAAG | 59.550 | 47.826 | 0.00 | 0.00 | 32.10 | 3.16 |
2931 | 3916 | 7.582667 | AACAAGAGCATTAAGTTACCTTGTT | 57.417 | 32.000 | 0.00 | 0.00 | 43.92 | 2.83 |
2937 | 3922 | 7.175119 | AGAGCATTAAGTTACCTTGTTTCCTTC | 59.825 | 37.037 | 0.00 | 0.00 | 31.89 | 3.46 |
2948 | 3933 | 4.262592 | CCTTGTTTCCTTCCAAAATCTGGG | 60.263 | 45.833 | 0.00 | 0.00 | 46.44 | 4.45 |
2949 | 3934 | 2.632512 | TGTTTCCTTCCAAAATCTGGGC | 59.367 | 45.455 | 0.00 | 0.00 | 46.44 | 5.36 |
2953 | 3938 | 2.025321 | TCCTTCCAAAATCTGGGCTACC | 60.025 | 50.000 | 0.00 | 0.00 | 46.44 | 3.18 |
3051 | 4038 | 9.328721 | GCAATTCCAAGCAAAATTGTTAATTAC | 57.671 | 29.630 | 8.96 | 0.00 | 42.29 | 1.89 |
3097 | 4122 | 2.159382 | AGCAAGGTGGTATTGTTTCCG | 58.841 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
3208 | 4426 | 1.154205 | CCTATTGCTGGTCGCTTCCG | 61.154 | 60.000 | 0.00 | 0.00 | 40.11 | 4.30 |
3214 | 4432 | 1.513158 | CTGGTCGCTTCCGTGATCT | 59.487 | 57.895 | 0.00 | 0.00 | 32.00 | 2.75 |
3229 | 4447 | 3.448686 | GTGATCTCGACATCCAAATCGT | 58.551 | 45.455 | 0.00 | 0.00 | 39.38 | 3.73 |
3271 | 4491 | 1.153005 | CCAAGCCATCTCCTGCCTC | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
3305 | 4525 | 1.354368 | TCTTTCACCATCCCCACCTTC | 59.646 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
3315 | 4535 | 1.221840 | CCCACCTTCTCATCCACCG | 59.778 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
3351 | 4571 | 0.584396 | GTTGTCGTGCCGTCAAATCA | 59.416 | 50.000 | 8.29 | 0.00 | 36.79 | 2.57 |
3456 | 4688 | 0.402272 | AGTTGTCTTACCCCCACCCA | 60.402 | 55.000 | 0.00 | 0.00 | 0.00 | 4.51 |
3485 | 4717 | 1.373435 | CGATATTGCCCCGCCCTAA | 59.627 | 57.895 | 0.00 | 0.00 | 0.00 | 2.69 |
3486 | 4718 | 0.953960 | CGATATTGCCCCGCCCTAAC | 60.954 | 60.000 | 0.00 | 0.00 | 0.00 | 2.34 |
3487 | 4719 | 0.953960 | GATATTGCCCCGCCCTAACG | 60.954 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3488 | 4720 | 3.760700 | TATTGCCCCGCCCTAACGC | 62.761 | 63.158 | 0.00 | 0.00 | 0.00 | 4.84 |
3491 | 4723 | 4.165486 | GCCCCGCCCTAACGCTAA | 62.165 | 66.667 | 0.00 | 0.00 | 0.00 | 3.09 |
3492 | 4724 | 2.202974 | CCCCGCCCTAACGCTAAC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 2.34 |
3493 | 4725 | 2.580276 | CCCGCCCTAACGCTAACA | 59.420 | 61.111 | 0.00 | 0.00 | 0.00 | 2.41 |
3509 | 4741 | 0.396811 | AACACCTCTACCACTGCACC | 59.603 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
3510 | 4742 | 0.762842 | ACACCTCTACCACTGCACCA | 60.763 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3538 | 4771 | 2.500098 | CCGTCTAAATCCCCTCTCAACA | 59.500 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
3539 | 4772 | 3.430929 | CCGTCTAAATCCCCTCTCAACAG | 60.431 | 52.174 | 0.00 | 0.00 | 0.00 | 3.16 |
3615 | 4848 | 6.510879 | TCGTTAATCAGCTAGAACAGAAGA | 57.489 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
3616 | 4849 | 7.101652 | TCGTTAATCAGCTAGAACAGAAGAT | 57.898 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
3617 | 4850 | 7.197017 | TCGTTAATCAGCTAGAACAGAAGATC | 58.803 | 38.462 | 0.00 | 0.00 | 0.00 | 2.75 |
3618 | 4851 | 6.419413 | CGTTAATCAGCTAGAACAGAAGATCC | 59.581 | 42.308 | 0.00 | 0.00 | 0.00 | 3.36 |
3619 | 4852 | 7.496747 | GTTAATCAGCTAGAACAGAAGATCCT | 58.503 | 38.462 | 0.00 | 0.00 | 0.00 | 3.24 |
3620 | 4853 | 5.789643 | ATCAGCTAGAACAGAAGATCCTC | 57.210 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
3622 | 4855 | 6.007485 | TCAGCTAGAACAGAAGATCCTCTA | 57.993 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
3623 | 4856 | 6.427441 | TCAGCTAGAACAGAAGATCCTCTAA | 58.573 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
3625 | 4858 | 7.230510 | TCAGCTAGAACAGAAGATCCTCTAATC | 59.769 | 40.741 | 0.00 | 0.00 | 0.00 | 1.75 |
3626 | 4859 | 7.231317 | CAGCTAGAACAGAAGATCCTCTAATCT | 59.769 | 40.741 | 11.01 | 11.01 | 37.61 | 2.40 |
3627 | 4860 | 7.784550 | AGCTAGAACAGAAGATCCTCTAATCTT | 59.215 | 37.037 | 11.34 | 0.00 | 46.23 | 2.40 |
3674 | 4907 | 5.723492 | TGCTCAGAACATAACATGATTCG | 57.277 | 39.130 | 0.00 | 0.00 | 0.00 | 3.34 |
3677 | 4910 | 5.220739 | GCTCAGAACATAACATGATTCGCTT | 60.221 | 40.000 | 0.00 | 0.00 | 0.00 | 4.68 |
3924 | 5202 | 0.244721 | GAAACCCTTCAGTGCCATGC | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 4.06 |
3948 | 5311 | 6.476706 | GCAATATTTCTCCACACAATTAAGGC | 59.523 | 38.462 | 0.00 | 0.00 | 0.00 | 4.35 |
4051 | 7043 | 4.308265 | TGGTGCATGTTTGATGTTTGATG | 58.692 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
4054 | 7046 | 5.925397 | GGTGCATGTTTGATGTTTGATGTTA | 59.075 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
4056 | 7048 | 7.412129 | GGTGCATGTTTGATGTTTGATGTTATG | 60.412 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
4057 | 7049 | 6.590677 | TGCATGTTTGATGTTTGATGTTATGG | 59.409 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
4058 | 7050 | 6.591062 | GCATGTTTGATGTTTGATGTTATGGT | 59.409 | 34.615 | 0.00 | 0.00 | 0.00 | 3.55 |
4059 | 7051 | 7.758980 | GCATGTTTGATGTTTGATGTTATGGTA | 59.241 | 33.333 | 0.00 | 0.00 | 0.00 | 3.25 |
4060 | 7052 | 9.806203 | CATGTTTGATGTTTGATGTTATGGTAT | 57.194 | 29.630 | 0.00 | 0.00 | 0.00 | 2.73 |
4147 | 7163 | 4.814771 | ACTAACTGGTCCTTTTCTTTCACG | 59.185 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
4193 | 7218 | 5.471257 | ACACTAGCTGCTAACAAACTACTC | 58.529 | 41.667 | 11.02 | 0.00 | 0.00 | 2.59 |
4195 | 7220 | 3.336138 | AGCTGCTAACAAACTACTCCC | 57.664 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
4196 | 7221 | 2.907042 | AGCTGCTAACAAACTACTCCCT | 59.093 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
4197 | 7222 | 3.055747 | AGCTGCTAACAAACTACTCCCTC | 60.056 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
4198 | 7223 | 3.055747 | GCTGCTAACAAACTACTCCCTCT | 60.056 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
4199 | 7224 | 4.499183 | CTGCTAACAAACTACTCCCTCTG | 58.501 | 47.826 | 0.00 | 0.00 | 0.00 | 3.35 |
4200 | 7225 | 3.901844 | TGCTAACAAACTACTCCCTCTGT | 59.098 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
4201 | 7226 | 4.021368 | TGCTAACAAACTACTCCCTCTGTC | 60.021 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
4202 | 7227 | 4.621038 | GCTAACAAACTACTCCCTCTGTCC | 60.621 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
4203 | 7228 | 2.258109 | ACAAACTACTCCCTCTGTCCC | 58.742 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
4204 | 7229 | 2.257207 | CAAACTACTCCCTCTGTCCCA | 58.743 | 52.381 | 0.00 | 0.00 | 0.00 | 4.37 |
4205 | 7230 | 2.840651 | CAAACTACTCCCTCTGTCCCAT | 59.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4206 | 7231 | 4.030913 | CAAACTACTCCCTCTGTCCCATA | 58.969 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
4207 | 7232 | 4.348020 | AACTACTCCCTCTGTCCCATAA | 57.652 | 45.455 | 0.00 | 0.00 | 0.00 | 1.90 |
4208 | 7233 | 4.561254 | ACTACTCCCTCTGTCCCATAAT | 57.439 | 45.455 | 0.00 | 0.00 | 0.00 | 1.28 |
4209 | 7234 | 4.227197 | ACTACTCCCTCTGTCCCATAATG | 58.773 | 47.826 | 0.00 | 0.00 | 0.00 | 1.90 |
4210 | 7235 | 3.136641 | ACTCCCTCTGTCCCATAATGT | 57.863 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
4211 | 7236 | 4.280789 | ACTCCCTCTGTCCCATAATGTA | 57.719 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
4212 | 7237 | 4.631234 | ACTCCCTCTGTCCCATAATGTAA | 58.369 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
4213 | 7238 | 4.656112 | ACTCCCTCTGTCCCATAATGTAAG | 59.344 | 45.833 | 0.00 | 0.00 | 0.00 | 2.34 |
4214 | 7239 | 4.890988 | TCCCTCTGTCCCATAATGTAAGA | 58.109 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
4215 | 7240 | 4.654262 | TCCCTCTGTCCCATAATGTAAGAC | 59.346 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
4216 | 7241 | 4.501571 | CCCTCTGTCCCATAATGTAAGACG | 60.502 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4217 | 7242 | 4.099573 | CCTCTGTCCCATAATGTAAGACGT | 59.900 | 45.833 | 0.00 | 0.00 | 0.00 | 4.34 |
4218 | 7243 | 5.395324 | CCTCTGTCCCATAATGTAAGACGTT | 60.395 | 44.000 | 0.00 | 0.00 | 0.00 | 3.99 |
4219 | 7244 | 6.045072 | TCTGTCCCATAATGTAAGACGTTT | 57.955 | 37.500 | 0.00 | 0.00 | 0.00 | 3.60 |
4220 | 7245 | 6.469410 | TCTGTCCCATAATGTAAGACGTTTT | 58.531 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
4221 | 7246 | 6.938030 | TCTGTCCCATAATGTAAGACGTTTTT | 59.062 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
4250 | 7275 | 7.211966 | ACTACACTAGTGTCAAAATACGTCT | 57.788 | 36.000 | 31.11 | 5.44 | 43.74 | 4.18 |
4251 | 7276 | 7.655490 | ACTACACTAGTGTCAAAATACGTCTT | 58.345 | 34.615 | 31.11 | 4.99 | 43.74 | 3.01 |
4252 | 7277 | 8.786898 | ACTACACTAGTGTCAAAATACGTCTTA | 58.213 | 33.333 | 31.11 | 8.36 | 43.74 | 2.10 |
4253 | 7278 | 7.864307 | ACACTAGTGTCAAAATACGTCTTAC | 57.136 | 36.000 | 22.95 | 0.00 | 40.24 | 2.34 |
4254 | 7279 | 7.428020 | ACACTAGTGTCAAAATACGTCTTACA | 58.572 | 34.615 | 22.95 | 0.00 | 40.24 | 2.41 |
4255 | 7280 | 8.086522 | ACACTAGTGTCAAAATACGTCTTACAT | 58.913 | 33.333 | 22.95 | 0.00 | 40.24 | 2.29 |
4256 | 7281 | 8.922676 | CACTAGTGTCAAAATACGTCTTACATT | 58.077 | 33.333 | 15.06 | 0.00 | 0.00 | 2.71 |
4260 | 7285 | 8.879759 | AGTGTCAAAATACGTCTTACATTATGG | 58.120 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
4261 | 7286 | 8.120465 | GTGTCAAAATACGTCTTACATTATGGG | 58.880 | 37.037 | 0.00 | 0.00 | 0.00 | 4.00 |
4262 | 7287 | 8.041919 | TGTCAAAATACGTCTTACATTATGGGA | 58.958 | 33.333 | 0.00 | 0.00 | 0.00 | 4.37 |
4263 | 7288 | 8.333186 | GTCAAAATACGTCTTACATTATGGGAC | 58.667 | 37.037 | 0.00 | 1.75 | 0.00 | 4.46 |
4266 | 7291 | 3.720949 | CGTCTTACATTATGGGACGGA | 57.279 | 47.619 | 20.50 | 2.30 | 43.69 | 4.69 |
4267 | 7292 | 3.639538 | CGTCTTACATTATGGGACGGAG | 58.360 | 50.000 | 20.50 | 2.74 | 43.69 | 4.63 |
4268 | 7293 | 3.552273 | CGTCTTACATTATGGGACGGAGG | 60.552 | 52.174 | 20.50 | 5.87 | 43.69 | 4.30 |
4269 | 7294 | 2.969950 | TCTTACATTATGGGACGGAGGG | 59.030 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4270 | 7295 | 2.779429 | TACATTATGGGACGGAGGGA | 57.221 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4271 | 7296 | 1.424638 | ACATTATGGGACGGAGGGAG | 58.575 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4320 | 7348 | 7.201857 | GCTTCTTATGGACTTCATTGGCTTAAT | 60.202 | 37.037 | 0.00 | 0.00 | 37.30 | 1.40 |
4600 | 7628 | 8.801715 | ATCAAACAATGCTTTTTGTACTACTG | 57.198 | 30.769 | 0.00 | 0.00 | 38.85 | 2.74 |
4629 | 7657 | 6.016276 | TCTCCCTAAAACTGCATTGTTCTTTC | 60.016 | 38.462 | 0.00 | 0.00 | 0.00 | 2.62 |
4747 | 7778 | 2.768527 | TGAGGAACCTGATAGAGCCAAG | 59.231 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
4748 | 7779 | 1.488393 | AGGAACCTGATAGAGCCAAGC | 59.512 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
4759 | 7790 | 2.222027 | AGAGCCAAGCACAAAGTACAC | 58.778 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
4771 | 7802 | 3.250040 | ACAAAGTACACGGATCAAGTTGC | 59.750 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
4876 | 7907 | 8.446599 | ACTAGTTTTGTTAGCAAGCTTAAAGA | 57.553 | 30.769 | 0.00 | 0.00 | 35.82 | 2.52 |
4929 | 7964 | 3.434596 | CCAAGCATCAGAATCAGATGGGA | 60.435 | 47.826 | 15.75 | 0.00 | 42.38 | 4.37 |
5020 | 8055 | 1.200020 | GCCTGGTGATTCTTTGGTTCG | 59.800 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
5042 | 8077 | 4.435121 | CGTTTTCCATGCCTACGTACTTTC | 60.435 | 45.833 | 0.00 | 0.00 | 0.00 | 2.62 |
5084 | 8119 | 7.213216 | TGTTGTAGCATTGCTTGAATCTTTA | 57.787 | 32.000 | 17.71 | 0.00 | 40.44 | 1.85 |
5252 | 8287 | 5.776173 | TGTTAGAGCAGCTAAGGTATCTC | 57.224 | 43.478 | 0.00 | 0.00 | 39.66 | 2.75 |
5275 | 8310 | 6.110707 | TCGACTTCAGGGGAACAAATATAAC | 58.889 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
5333 | 8368 | 3.119388 | TGAGGATAGTACGTGGTTTTCCG | 60.119 | 47.826 | 0.00 | 0.00 | 44.36 | 4.30 |
5406 | 8441 | 5.097742 | TCGGCTCAAAGATCTTGGAATAA | 57.902 | 39.130 | 13.61 | 0.00 | 0.00 | 1.40 |
5468 | 8503 | 1.202568 | GCAAAGCTTGGCAAGAAGGTT | 60.203 | 47.619 | 30.45 | 13.63 | 43.74 | 3.50 |
5511 | 8546 | 7.729881 | TCTTAGGTTGTAGTAGTAAACTGGGAA | 59.270 | 37.037 | 0.00 | 0.00 | 39.39 | 3.97 |
5513 | 8548 | 7.140522 | AGGTTGTAGTAGTAAACTGGGAAAA | 57.859 | 36.000 | 0.00 | 0.00 | 39.39 | 2.29 |
5528 | 8602 | 4.340617 | TGGGAAAAGATAGGCAACGAATT | 58.659 | 39.130 | 0.00 | 0.00 | 46.39 | 2.17 |
5532 | 8606 | 4.622701 | AAAGATAGGCAACGAATTGAGC | 57.377 | 40.909 | 0.00 | 0.00 | 46.39 | 4.26 |
5585 | 9935 | 6.109359 | CAGGTTAGAATTTCTTGAGATCGGT | 58.891 | 40.000 | 3.86 | 0.00 | 0.00 | 4.69 |
5591 | 9941 | 6.284459 | AGAATTTCTTGAGATCGGTGGATAC | 58.716 | 40.000 | 0.00 | 0.00 | 31.51 | 2.24 |
5678 | 10028 | 2.027192 | TCTGTTCATTACTGACCTGGCC | 60.027 | 50.000 | 0.00 | 0.00 | 30.69 | 5.36 |
5739 | 10090 | 6.773200 | CCCCTATTTGGAGTTCTTTAAGATCC | 59.227 | 42.308 | 7.48 | 7.48 | 38.35 | 3.36 |
5740 | 10091 | 7.366913 | CCCCTATTTGGAGTTCTTTAAGATCCT | 60.367 | 40.741 | 13.72 | 5.53 | 38.35 | 3.24 |
5784 | 10135 | 1.466856 | TGGACCAGAATTCATGCAGC | 58.533 | 50.000 | 8.44 | 0.00 | 0.00 | 5.25 |
5833 | 10184 | 1.471119 | CAGATGGTGGCAGCATTTCT | 58.529 | 50.000 | 30.45 | 22.52 | 36.31 | 2.52 |
5849 | 10200 | 5.035443 | GCATTTCTGAGATTGCATGAGTTC | 58.965 | 41.667 | 11.59 | 0.00 | 35.22 | 3.01 |
5923 | 10274 | 1.871772 | CCTTTCCTGTCTTGCAGCG | 59.128 | 57.895 | 0.00 | 0.00 | 43.71 | 5.18 |
6069 | 10420 | 1.487976 | TGGTTGAGCTGGATCTGGATC | 59.512 | 52.381 | 0.00 | 2.24 | 37.11 | 3.36 |
6129 | 10480 | 4.338879 | ACTGCAGAAGCTTACCATCAAAT | 58.661 | 39.130 | 23.35 | 0.00 | 42.74 | 2.32 |
6136 | 10487 | 4.235079 | AGCTTACCATCAAATACTGCCA | 57.765 | 40.909 | 0.00 | 0.00 | 0.00 | 4.92 |
6141 | 10492 | 6.350110 | GCTTACCATCAAATACTGCCAAAAGA | 60.350 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
6195 | 10546 | 3.366396 | AGGCTCTTTCTCTCGGATAACA | 58.634 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
6262 | 10613 | 2.136791 | TGGAGCTATACTGCAGCCC | 58.863 | 57.895 | 15.27 | 4.65 | 42.55 | 5.19 |
6291 | 10642 | 1.153168 | GCTTCCATAGCTGCGGGAA | 60.153 | 57.895 | 17.94 | 17.94 | 46.77 | 3.97 |
6329 | 10680 | 2.622942 | GGACAAGTTCAGCCATGTTGAA | 59.377 | 45.455 | 5.95 | 5.95 | 30.82 | 2.69 |
6348 | 10699 | 4.061596 | TGAACATGTCAAGACGTATGCAA | 58.938 | 39.130 | 0.00 | 0.00 | 31.51 | 4.08 |
6351 | 10702 | 3.679980 | ACATGTCAAGACGTATGCAAGTC | 59.320 | 43.478 | 11.02 | 11.02 | 37.63 | 3.01 |
6455 | 10829 | 6.767902 | TCATGTCCAGAGGTAAATTAGCATTC | 59.232 | 38.462 | 4.96 | 0.00 | 0.00 | 2.67 |
6456 | 10830 | 5.116180 | TGTCCAGAGGTAAATTAGCATTCG | 58.884 | 41.667 | 4.96 | 0.00 | 0.00 | 3.34 |
6458 | 10832 | 5.006746 | GTCCAGAGGTAAATTAGCATTCGTG | 59.993 | 44.000 | 4.96 | 0.00 | 0.00 | 4.35 |
6507 | 10892 | 8.575649 | TTCTGGTTATTTGAACTATTCCCTTC | 57.424 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
6521 | 10915 | 3.308438 | TCCCTTCGTTTTCTACCTTCG | 57.692 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
6591 | 13712 | 5.899631 | ACACCCTTCTAAAGTAGGACAAA | 57.100 | 39.130 | 4.35 | 0.00 | 34.90 | 2.83 |
6652 | 13886 | 4.785511 | ACCGGAGTAATAGATTGATCGG | 57.214 | 45.455 | 9.46 | 0.00 | 0.00 | 4.18 |
6670 | 13906 | 8.909708 | TTGATCGGCTTTTATCATTTTGTAAG | 57.090 | 30.769 | 0.00 | 0.00 | 32.40 | 2.34 |
6676 | 13912 | 7.552459 | GGCTTTTATCATTTTGTAAGGGCTAA | 58.448 | 34.615 | 0.00 | 0.00 | 0.00 | 3.09 |
6677 | 13913 | 7.491372 | GGCTTTTATCATTTTGTAAGGGCTAAC | 59.509 | 37.037 | 0.00 | 0.00 | 0.00 | 2.34 |
6683 | 13919 | 5.242838 | TCATTTTGTAAGGGCTAACTGTTGG | 59.757 | 40.000 | 2.69 | 0.69 | 0.00 | 3.77 |
6704 | 16304 | 4.527816 | TGGCCAATGCTACTTTCTGATTTT | 59.472 | 37.500 | 0.61 | 0.00 | 37.74 | 1.82 |
6705 | 16305 | 5.011943 | TGGCCAATGCTACTTTCTGATTTTT | 59.988 | 36.000 | 0.61 | 0.00 | 37.74 | 1.94 |
6708 | 16308 | 6.690530 | CCAATGCTACTTTCTGATTTTTCCA | 58.309 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
6740 | 16341 | 8.577939 | CATCATTTGCTAAGTTTATGTTGTTCG | 58.422 | 33.333 | 0.00 | 0.00 | 0.00 | 3.95 |
6774 | 16436 | 2.846206 | ACTTCCCCTGCTCATATGTGAA | 59.154 | 45.455 | 8.94 | 0.00 | 33.05 | 3.18 |
7096 | 16771 | 4.624913 | TCATAGGATCCTCTTCTGGTGTT | 58.375 | 43.478 | 20.22 | 0.00 | 0.00 | 3.32 |
7140 | 16815 | 5.061179 | GGTAACTGAGAGGTTTGTTGCTAA | 58.939 | 41.667 | 0.00 | 0.00 | 0.00 | 3.09 |
7141 | 16816 | 5.049612 | GGTAACTGAGAGGTTTGTTGCTAAC | 60.050 | 44.000 | 0.00 | 0.00 | 0.00 | 2.34 |
7252 | 16930 | 5.971202 | GCATAACTGTTGTGGTGTTATATGC | 59.029 | 40.000 | 17.23 | 9.81 | 35.79 | 3.14 |
7259 | 16937 | 3.756117 | TGTGGTGTTATATGCACAACCA | 58.244 | 40.909 | 13.71 | 10.14 | 39.40 | 3.67 |
7261 | 16939 | 4.769488 | TGTGGTGTTATATGCACAACCAAT | 59.231 | 37.500 | 13.71 | 0.00 | 39.40 | 3.16 |
7262 | 16940 | 5.101628 | GTGGTGTTATATGCACAACCAATG | 58.898 | 41.667 | 12.30 | 0.00 | 35.36 | 2.82 |
7274 | 16952 | 4.322650 | GCACAACCAATGTCCCATTTGTAT | 60.323 | 41.667 | 0.00 | 0.00 | 41.46 | 2.29 |
7279 | 16957 | 6.284891 | ACCAATGTCCCATTTGTATCAAAG | 57.715 | 37.500 | 1.67 | 0.00 | 0.00 | 2.77 |
7297 | 16978 | 2.839486 | AGTGCGACCATGAGAAGAAA | 57.161 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7352 | 17033 | 5.762179 | AGGAATGAGGTTCATGAACTACA | 57.238 | 39.130 | 31.81 | 28.83 | 37.15 | 2.74 |
7353 | 17034 | 6.126863 | AGGAATGAGGTTCATGAACTACAA | 57.873 | 37.500 | 31.81 | 18.45 | 37.15 | 2.41 |
7409 | 17102 | 3.560105 | GATTCTGAAATCTTCCAGGGGG | 58.440 | 50.000 | 0.00 | 0.00 | 38.61 | 5.40 |
7416 | 17109 | 0.029267 | ATCTTCCAGGGGGCTGAGAT | 60.029 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 |
7469 | 17162 | 7.565029 | TGAAGGTATCAGTAGATGGATCAGAAA | 59.435 | 37.037 | 0.00 | 0.00 | 35.67 | 2.52 |
7489 | 17182 | 5.476945 | AGAAATCGGGGAATACATAATTGGC | 59.523 | 40.000 | 0.00 | 0.00 | 0.00 | 4.52 |
7494 | 17187 | 4.331968 | GGGGAATACATAATTGGCGATGA | 58.668 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
7495 | 17188 | 4.764823 | GGGGAATACATAATTGGCGATGAA | 59.235 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
7496 | 17189 | 5.242838 | GGGGAATACATAATTGGCGATGAAA | 59.757 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
7497 | 17190 | 6.381801 | GGGAATACATAATTGGCGATGAAAG | 58.618 | 40.000 | 0.00 | 0.00 | 0.00 | 2.62 |
7601 | 17539 | 2.819552 | GCAACGACAACCTGTGCGT | 61.820 | 57.895 | 0.00 | 0.00 | 36.33 | 5.24 |
7610 | 17551 | 2.664851 | CCTGTGCGTTGAAGGCGA | 60.665 | 61.111 | 5.35 | 0.00 | 0.00 | 5.54 |
7615 | 17556 | 3.127533 | GCGTTGAAGGCGATGGCT | 61.128 | 61.111 | 0.00 | 0.00 | 41.24 | 4.75 |
7672 | 17613 | 2.933287 | TGGTGGCCGGTCAATCCT | 60.933 | 61.111 | 12.16 | 0.00 | 0.00 | 3.24 |
7760 | 17701 | 3.220222 | CAGCCATGCCGAGGTCTA | 58.780 | 61.111 | 0.00 | 0.00 | 0.00 | 2.59 |
7761 | 17702 | 1.227380 | CAGCCATGCCGAGGTCTAC | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 2.59 |
7763 | 17704 | 1.050988 | AGCCATGCCGAGGTCTACAT | 61.051 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
7777 | 17721 | 3.070302 | GGTCTACATCTGAGGATTGGGAC | 59.930 | 52.174 | 0.00 | 0.00 | 0.00 | 4.46 |
7980 | 17975 | 5.369404 | TCCTGCTGTTTCCATCCTTCATATA | 59.631 | 40.000 | 0.00 | 0.00 | 0.00 | 0.86 |
8004 | 18003 | 4.235762 | CGGCCCGGTGGATGTAGG | 62.236 | 72.222 | 0.00 | 0.00 | 0.00 | 3.18 |
8013 | 18024 | 1.075525 | TGGATGTAGGGGAGGACGG | 60.076 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
8049 | 18060 | 0.750911 | GGCTCAGGGGATGAAAGCAG | 60.751 | 60.000 | 0.00 | 0.00 | 37.52 | 4.24 |
8127 | 18150 | 6.584185 | TTTTCCTGCTTGATTTTAGGTACC | 57.416 | 37.500 | 2.73 | 2.73 | 0.00 | 3.34 |
8132 | 18155 | 5.235850 | TGCTTGATTTTAGGTACCACTGA | 57.764 | 39.130 | 15.94 | 0.00 | 0.00 | 3.41 |
8134 | 18157 | 6.953101 | TGCTTGATTTTAGGTACCACTGATA | 58.047 | 36.000 | 15.94 | 0.00 | 0.00 | 2.15 |
8151 | 18175 | 6.375455 | CCACTGATAGTACATTTTCCTGCTTT | 59.625 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
8214 | 18366 | 7.255381 | CCCTCAATTCCAGCAATATCAAACTAG | 60.255 | 40.741 | 0.00 | 0.00 | 0.00 | 2.57 |
8215 | 18367 | 7.031226 | TCAATTCCAGCAATATCAAACTAGC | 57.969 | 36.000 | 0.00 | 0.00 | 0.00 | 3.42 |
8537 | 18700 | 9.959749 | GTTGAATGTTTTCTTAAGTTGGTCATA | 57.040 | 29.630 | 1.63 | 0.00 | 32.78 | 2.15 |
8573 | 18736 | 7.549488 | GGCAAAGACAAGTATTATGTAGTCTGT | 59.451 | 37.037 | 0.00 | 0.00 | 36.55 | 3.41 |
8604 | 18767 | 5.411361 | TGTATGTGCAGTAAGCTTTAACTGG | 59.589 | 40.000 | 24.15 | 11.07 | 45.94 | 4.00 |
8641 | 18809 | 5.865085 | TGCTTGGACACTATCTGTAGTTTT | 58.135 | 37.500 | 0.00 | 0.00 | 39.12 | 2.43 |
8668 | 18836 | 3.049708 | TCAGTTGATGCAGACTGAAGG | 57.950 | 47.619 | 21.22 | 3.29 | 46.64 | 3.46 |
8672 | 18840 | 4.094590 | CAGTTGATGCAGACTGAAGGATTC | 59.905 | 45.833 | 17.92 | 0.00 | 44.65 | 2.52 |
8673 | 18841 | 8.207652 | TCAGTTGATGCAGACTGAAGGATTCT | 62.208 | 42.308 | 21.22 | 0.00 | 46.64 | 2.40 |
8708 | 18876 | 4.743651 | GCAGGTAGCCATGTATGTGTATGT | 60.744 | 45.833 | 0.00 | 0.00 | 37.23 | 2.29 |
8709 | 18877 | 4.991056 | CAGGTAGCCATGTATGTGTATGTC | 59.009 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
8711 | 18879 | 4.991056 | GGTAGCCATGTATGTGTATGTCAG | 59.009 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
8712 | 18880 | 4.077300 | AGCCATGTATGTGTATGTCAGG | 57.923 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
8713 | 18881 | 3.455910 | AGCCATGTATGTGTATGTCAGGT | 59.544 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
8714 | 18882 | 3.561310 | GCCATGTATGTGTATGTCAGGTG | 59.439 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
8715 | 18883 | 3.561310 | CCATGTATGTGTATGTCAGGTGC | 59.439 | 47.826 | 0.00 | 0.00 | 0.00 | 5.01 |
8731 | 18899 | 0.965439 | GTGCATGTTTGGGCCAGTAA | 59.035 | 50.000 | 6.23 | 0.00 | 0.00 | 2.24 |
8733 | 18901 | 1.824230 | TGCATGTTTGGGCCAGTAATC | 59.176 | 47.619 | 6.23 | 0.00 | 0.00 | 1.75 |
8736 | 18904 | 3.429410 | GCATGTTTGGGCCAGTAATCTTC | 60.429 | 47.826 | 6.23 | 0.00 | 0.00 | 2.87 |
8743 | 18911 | 4.934356 | TGGGCCAGTAATCTTCTTCAATT | 58.066 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
8749 | 18917 | 6.375455 | GCCAGTAATCTTCTTCAATTCAAGGA | 59.625 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
8776 | 18944 | 3.485463 | ACGAAGTCCCTGATGTCAAAA | 57.515 | 42.857 | 0.00 | 0.00 | 29.74 | 2.44 |
8777 | 18945 | 3.815809 | ACGAAGTCCCTGATGTCAAAAA | 58.184 | 40.909 | 0.00 | 0.00 | 29.74 | 1.94 |
8778 | 18946 | 4.398319 | ACGAAGTCCCTGATGTCAAAAAT | 58.602 | 39.130 | 0.00 | 0.00 | 29.74 | 1.82 |
8779 | 18947 | 4.216257 | ACGAAGTCCCTGATGTCAAAAATG | 59.784 | 41.667 | 0.00 | 0.00 | 29.74 | 2.32 |
8780 | 18948 | 4.455533 | CGAAGTCCCTGATGTCAAAAATGA | 59.544 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
8781 | 18949 | 5.048782 | CGAAGTCCCTGATGTCAAAAATGAA | 60.049 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
8782 | 18950 | 5.712152 | AGTCCCTGATGTCAAAAATGAAC | 57.288 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
8783 | 18951 | 5.388654 | AGTCCCTGATGTCAAAAATGAACT | 58.611 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
8784 | 18952 | 6.542821 | AGTCCCTGATGTCAAAAATGAACTA | 58.457 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
8785 | 18953 | 6.656693 | AGTCCCTGATGTCAAAAATGAACTAG | 59.343 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
8786 | 18954 | 6.655003 | GTCCCTGATGTCAAAAATGAACTAGA | 59.345 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
8787 | 18955 | 7.174946 | GTCCCTGATGTCAAAAATGAACTAGAA | 59.825 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
8788 | 18956 | 7.890127 | TCCCTGATGTCAAAAATGAACTAGAAT | 59.110 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
8789 | 18957 | 8.526147 | CCCTGATGTCAAAAATGAACTAGAATT | 58.474 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
8790 | 18958 | 9.918630 | CCTGATGTCAAAAATGAACTAGAATTT | 57.081 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
8802 | 18970 | 6.169094 | TGAACTAGAATTTCAGAGCAAGAGG | 58.831 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
8807 | 18975 | 3.612247 | TTCAGAGCAAGAGGGCCGC | 62.612 | 63.158 | 0.00 | 0.00 | 0.00 | 6.53 |
8809 | 18977 | 3.406200 | AGAGCAAGAGGGCCGCAT | 61.406 | 61.111 | 10.70 | 0.00 | 0.00 | 4.73 |
8810 | 18978 | 2.439156 | GAGCAAGAGGGCCGCATT | 60.439 | 61.111 | 10.70 | 0.00 | 0.00 | 3.56 |
8811 | 18979 | 2.036256 | AGCAAGAGGGCCGCATTT | 59.964 | 55.556 | 10.70 | 0.00 | 0.00 | 2.32 |
8812 | 18980 | 2.182537 | GCAAGAGGGCCGCATTTG | 59.817 | 61.111 | 10.70 | 7.47 | 0.00 | 2.32 |
8813 | 18981 | 2.639327 | GCAAGAGGGCCGCATTTGT | 61.639 | 57.895 | 10.70 | 0.00 | 0.00 | 2.83 |
8828 | 18996 | 5.123186 | CCGCATTTGTAGTTCCATTACTTGA | 59.877 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
8845 | 19013 | 9.770503 | CATTACTTGATATGATGAAATAGCAGC | 57.229 | 33.333 | 0.00 | 0.00 | 30.64 | 5.25 |
8848 | 19016 | 8.097078 | ACTTGATATGATGAAATAGCAGCTTC | 57.903 | 34.615 | 0.00 | 0.00 | 30.64 | 3.86 |
8862 | 19030 | 3.693085 | AGCAGCTTCCATCATTGTTACAG | 59.307 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
8881 | 19049 | 2.807967 | CAGCACCGTTTCTCTGAATTGA | 59.192 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
8882 | 19050 | 3.250762 | CAGCACCGTTTCTCTGAATTGAA | 59.749 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
8883 | 19051 | 4.074970 | AGCACCGTTTCTCTGAATTGAAT | 58.925 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
8884 | 19052 | 4.520492 | AGCACCGTTTCTCTGAATTGAATT | 59.480 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
8885 | 19053 | 4.618489 | GCACCGTTTCTCTGAATTGAATTG | 59.382 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
8886 | 19054 | 4.618489 | CACCGTTTCTCTGAATTGAATTGC | 59.382 | 41.667 | 0.00 | 0.00 | 0.00 | 3.56 |
8887 | 19055 | 4.168760 | CCGTTTCTCTGAATTGAATTGCC | 58.831 | 43.478 | 0.00 | 0.00 | 0.00 | 4.52 |
8888 | 19056 | 4.321156 | CCGTTTCTCTGAATTGAATTGCCA | 60.321 | 41.667 | 0.00 | 0.00 | 0.00 | 4.92 |
8902 | 19070 | 4.492604 | GCCACAAGCAACCCAGTA | 57.507 | 55.556 | 0.00 | 0.00 | 42.97 | 2.74 |
8903 | 19071 | 2.727103 | GCCACAAGCAACCCAGTAA | 58.273 | 52.632 | 0.00 | 0.00 | 42.97 | 2.24 |
8904 | 19072 | 1.256812 | GCCACAAGCAACCCAGTAAT | 58.743 | 50.000 | 0.00 | 0.00 | 42.97 | 1.89 |
8905 | 19073 | 1.202348 | GCCACAAGCAACCCAGTAATC | 59.798 | 52.381 | 0.00 | 0.00 | 42.97 | 1.75 |
8906 | 19074 | 2.795329 | CCACAAGCAACCCAGTAATCT | 58.205 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
8907 | 19075 | 3.872240 | GCCACAAGCAACCCAGTAATCTA | 60.872 | 47.826 | 0.00 | 0.00 | 42.97 | 1.98 |
8908 | 19076 | 3.941483 | CCACAAGCAACCCAGTAATCTAG | 59.059 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
8939 | 19107 | 0.684153 | AGCAACACCAGCCACAACTT | 60.684 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
8947 | 19115 | 1.605710 | CCAGCCACAACTTTCTGTCAG | 59.394 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
8954 | 19122 | 4.150627 | CCACAACTTTCTGTCAGTCATACG | 59.849 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
8957 | 19125 | 2.271800 | CTTTCTGTCAGTCATACGGCC | 58.728 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
8958 | 19126 | 1.262417 | TTCTGTCAGTCATACGGCCA | 58.738 | 50.000 | 2.24 | 0.00 | 0.00 | 5.36 |
8959 | 19127 | 0.530744 | TCTGTCAGTCATACGGCCAC | 59.469 | 55.000 | 2.24 | 0.00 | 0.00 | 5.01 |
8960 | 19128 | 0.246360 | CTGTCAGTCATACGGCCACA | 59.754 | 55.000 | 2.24 | 0.00 | 0.00 | 4.17 |
8992 | 19160 | 9.178427 | CAGAAGAAACTTTCTGTCAATCAAATC | 57.822 | 33.333 | 4.75 | 0.00 | 45.70 | 2.17 |
8993 | 19161 | 8.906867 | AGAAGAAACTTTCTGTCAATCAAATCA | 58.093 | 29.630 | 4.75 | 0.00 | 40.59 | 2.57 |
8994 | 19162 | 9.688592 | GAAGAAACTTTCTGTCAATCAAATCAT | 57.311 | 29.630 | 4.75 | 0.00 | 40.59 | 2.45 |
8995 | 19163 | 9.472361 | AAGAAACTTTCTGTCAATCAAATCATG | 57.528 | 29.630 | 4.75 | 0.00 | 40.59 | 3.07 |
8996 | 19164 | 8.636213 | AGAAACTTTCTGTCAATCAAATCATGT | 58.364 | 29.630 | 3.07 | 0.00 | 38.91 | 3.21 |
8997 | 19165 | 9.897744 | GAAACTTTCTGTCAATCAAATCATGTA | 57.102 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
9002 | 19170 | 9.695526 | TTTCTGTCAATCAAATCATGTAAAAGG | 57.304 | 29.630 | 0.00 | 0.00 | 0.00 | 3.11 |
9003 | 19171 | 8.634335 | TCTGTCAATCAAATCATGTAAAAGGA | 57.366 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
9004 | 19172 | 8.514594 | TCTGTCAATCAAATCATGTAAAAGGAC | 58.485 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
9005 | 19173 | 8.408043 | TGTCAATCAAATCATGTAAAAGGACT | 57.592 | 30.769 | 0.00 | 0.00 | 0.00 | 3.85 |
9006 | 19174 | 9.513906 | TGTCAATCAAATCATGTAAAAGGACTA | 57.486 | 29.630 | 0.00 | 0.00 | 0.00 | 2.59 |
9013 | 19181 | 9.294030 | CAAATCATGTAAAAGGACTAAATCAGC | 57.706 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
9014 | 19182 | 8.579850 | AATCATGTAAAAGGACTAAATCAGCA | 57.420 | 30.769 | 0.00 | 0.00 | 0.00 | 4.41 |
9015 | 19183 | 8.757982 | ATCATGTAAAAGGACTAAATCAGCAT | 57.242 | 30.769 | 0.00 | 0.00 | 0.00 | 3.79 |
9016 | 19184 | 8.213518 | TCATGTAAAAGGACTAAATCAGCATC | 57.786 | 34.615 | 0.00 | 0.00 | 0.00 | 3.91 |
9017 | 19185 | 7.828717 | TCATGTAAAAGGACTAAATCAGCATCA | 59.171 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
9018 | 19186 | 7.994425 | TGTAAAAGGACTAAATCAGCATCAA | 57.006 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
9019 | 19187 | 7.816640 | TGTAAAAGGACTAAATCAGCATCAAC | 58.183 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
9020 | 19188 | 7.665559 | TGTAAAAGGACTAAATCAGCATCAACT | 59.334 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
9021 | 19189 | 6.749923 | AAAGGACTAAATCAGCATCAACTC | 57.250 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
9022 | 19190 | 5.426689 | AGGACTAAATCAGCATCAACTCA | 57.573 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
9023 | 19191 | 5.426504 | AGGACTAAATCAGCATCAACTCAG | 58.573 | 41.667 | 0.00 | 0.00 | 0.00 | 3.35 |
9024 | 19192 | 5.188555 | AGGACTAAATCAGCATCAACTCAGA | 59.811 | 40.000 | 0.00 | 0.00 | 0.00 | 3.27 |
9025 | 19193 | 5.523188 | GGACTAAATCAGCATCAACTCAGAG | 59.477 | 44.000 | 0.00 | 0.00 | 0.00 | 3.35 |
9026 | 19194 | 4.874966 | ACTAAATCAGCATCAACTCAGAGC | 59.125 | 41.667 | 0.00 | 0.00 | 0.00 | 4.09 |
9027 | 19195 | 3.630892 | AATCAGCATCAACTCAGAGCT | 57.369 | 42.857 | 0.00 | 0.00 | 35.63 | 4.09 |
9028 | 19196 | 2.669300 | TCAGCATCAACTCAGAGCTC | 57.331 | 50.000 | 5.27 | 5.27 | 32.35 | 4.09 |
9029 | 19197 | 1.206610 | TCAGCATCAACTCAGAGCTCC | 59.793 | 52.381 | 10.93 | 0.00 | 32.35 | 4.70 |
9030 | 19198 | 0.175302 | AGCATCAACTCAGAGCTCCG | 59.825 | 55.000 | 10.93 | 0.00 | 0.00 | 4.63 |
9031 | 19199 | 0.108424 | GCATCAACTCAGAGCTCCGT | 60.108 | 55.000 | 10.93 | 2.31 | 0.00 | 4.69 |
9032 | 19200 | 1.674221 | GCATCAACTCAGAGCTCCGTT | 60.674 | 52.381 | 10.93 | 8.90 | 0.00 | 4.44 |
9033 | 19201 | 2.266554 | CATCAACTCAGAGCTCCGTTC | 58.733 | 52.381 | 10.93 | 0.00 | 0.00 | 3.95 |
9034 | 19202 | 0.241213 | TCAACTCAGAGCTCCGTTCG | 59.759 | 55.000 | 10.93 | 7.06 | 0.00 | 3.95 |
9035 | 19203 | 0.241213 | CAACTCAGAGCTCCGTTCGA | 59.759 | 55.000 | 10.93 | 0.00 | 0.00 | 3.71 |
9036 | 19204 | 0.241481 | AACTCAGAGCTCCGTTCGAC | 59.759 | 55.000 | 10.93 | 0.00 | 0.00 | 4.20 |
9037 | 19205 | 1.226156 | CTCAGAGCTCCGTTCGACG | 60.226 | 63.158 | 10.93 | 0.00 | 42.11 | 5.12 |
9038 | 19206 | 1.636570 | CTCAGAGCTCCGTTCGACGA | 61.637 | 60.000 | 10.93 | 0.00 | 46.05 | 4.20 |
9039 | 19207 | 1.209383 | CAGAGCTCCGTTCGACGAA | 59.791 | 57.895 | 10.93 | 6.10 | 46.05 | 3.85 |
9040 | 19208 | 0.386858 | CAGAGCTCCGTTCGACGAAA | 60.387 | 55.000 | 12.67 | 0.00 | 46.05 | 3.46 |
9041 | 19209 | 0.526662 | AGAGCTCCGTTCGACGAAAT | 59.473 | 50.000 | 12.67 | 0.00 | 46.05 | 2.17 |
9042 | 19210 | 0.915227 | GAGCTCCGTTCGACGAAATC | 59.085 | 55.000 | 12.67 | 0.00 | 46.05 | 2.17 |
9043 | 19211 | 0.526662 | AGCTCCGTTCGACGAAATCT | 59.473 | 50.000 | 12.67 | 2.55 | 46.05 | 2.40 |
9044 | 19212 | 1.741706 | AGCTCCGTTCGACGAAATCTA | 59.258 | 47.619 | 12.67 | 0.00 | 46.05 | 1.98 |
9045 | 19213 | 2.358267 | AGCTCCGTTCGACGAAATCTAT | 59.642 | 45.455 | 12.67 | 0.00 | 46.05 | 1.98 |
9046 | 19214 | 2.720067 | GCTCCGTTCGACGAAATCTATC | 59.280 | 50.000 | 12.67 | 0.00 | 46.05 | 2.08 |
9047 | 19215 | 3.791122 | GCTCCGTTCGACGAAATCTATCA | 60.791 | 47.826 | 12.67 | 0.00 | 46.05 | 2.15 |
9048 | 19216 | 4.537965 | CTCCGTTCGACGAAATCTATCAT | 58.462 | 43.478 | 12.67 | 0.00 | 46.05 | 2.45 |
9049 | 19217 | 4.287720 | TCCGTTCGACGAAATCTATCATG | 58.712 | 43.478 | 12.67 | 0.00 | 46.05 | 3.07 |
9050 | 19218 | 3.121328 | CCGTTCGACGAAATCTATCATGC | 60.121 | 47.826 | 12.67 | 0.00 | 46.05 | 4.06 |
9051 | 19219 | 3.485743 | CGTTCGACGAAATCTATCATGCA | 59.514 | 43.478 | 12.67 | 0.00 | 46.05 | 3.96 |
9052 | 19220 | 4.604043 | CGTTCGACGAAATCTATCATGCAC | 60.604 | 45.833 | 12.67 | 0.00 | 46.05 | 4.57 |
9053 | 19221 | 4.040445 | TCGACGAAATCTATCATGCACA | 57.960 | 40.909 | 0.00 | 0.00 | 0.00 | 4.57 |
9054 | 19222 | 4.620982 | TCGACGAAATCTATCATGCACAT | 58.379 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
9055 | 19223 | 4.681483 | TCGACGAAATCTATCATGCACATC | 59.319 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
9056 | 19224 | 4.683320 | CGACGAAATCTATCATGCACATCT | 59.317 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
9057 | 19225 | 5.176406 | CGACGAAATCTATCATGCACATCTT | 59.824 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
9058 | 19226 | 6.536731 | ACGAAATCTATCATGCACATCTTC | 57.463 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
9059 | 19227 | 6.051074 | ACGAAATCTATCATGCACATCTTCA | 58.949 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
9060 | 19228 | 6.202379 | ACGAAATCTATCATGCACATCTTCAG | 59.798 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
9061 | 19229 | 5.943706 | AATCTATCATGCACATCTTCAGC | 57.056 | 39.130 | 0.00 | 0.00 | 0.00 | 4.26 |
9062 | 19230 | 3.387397 | TCTATCATGCACATCTTCAGCG | 58.613 | 45.455 | 0.00 | 0.00 | 0.00 | 5.18 |
9063 | 19231 | 0.661552 | ATCATGCACATCTTCAGCGC | 59.338 | 50.000 | 0.00 | 0.00 | 0.00 | 5.92 |
9064 | 19232 | 1.063649 | CATGCACATCTTCAGCGCC | 59.936 | 57.895 | 2.29 | 0.00 | 0.00 | 6.53 |
9065 | 19233 | 1.377594 | ATGCACATCTTCAGCGCCA | 60.378 | 52.632 | 2.29 | 0.00 | 0.00 | 5.69 |
9066 | 19234 | 0.750546 | ATGCACATCTTCAGCGCCAT | 60.751 | 50.000 | 2.29 | 0.00 | 0.00 | 4.40 |
9067 | 19235 | 1.354506 | GCACATCTTCAGCGCCATC | 59.645 | 57.895 | 2.29 | 0.00 | 0.00 | 3.51 |
9068 | 19236 | 1.094073 | GCACATCTTCAGCGCCATCT | 61.094 | 55.000 | 2.29 | 0.00 | 0.00 | 2.90 |
9069 | 19237 | 0.935898 | CACATCTTCAGCGCCATCTC | 59.064 | 55.000 | 2.29 | 0.00 | 0.00 | 2.75 |
9070 | 19238 | 0.179062 | ACATCTTCAGCGCCATCTCC | 60.179 | 55.000 | 2.29 | 0.00 | 0.00 | 3.71 |
9071 | 19239 | 1.068753 | ATCTTCAGCGCCATCTCCG | 59.931 | 57.895 | 2.29 | 0.00 | 0.00 | 4.63 |
9072 | 19240 | 1.680522 | ATCTTCAGCGCCATCTCCGT | 61.681 | 55.000 | 2.29 | 0.00 | 0.00 | 4.69 |
9073 | 19241 | 1.880340 | CTTCAGCGCCATCTCCGTC | 60.880 | 63.158 | 2.29 | 0.00 | 0.00 | 4.79 |
9074 | 19242 | 3.699955 | TTCAGCGCCATCTCCGTCG | 62.700 | 63.158 | 2.29 | 0.00 | 0.00 | 5.12 |
9078 | 19246 | 4.193334 | CGCCATCTCCGTCGCAGA | 62.193 | 66.667 | 0.00 | 0.00 | 0.00 | 4.26 |
9079 | 19247 | 2.184322 | GCCATCTCCGTCGCAGAA | 59.816 | 61.111 | 0.00 | 0.00 | 39.69 | 3.02 |
9080 | 19248 | 1.880340 | GCCATCTCCGTCGCAGAAG | 60.880 | 63.158 | 0.00 | 0.00 | 39.69 | 2.85 |
9081 | 19249 | 1.880340 | CCATCTCCGTCGCAGAAGC | 60.880 | 63.158 | 0.00 | 0.00 | 39.69 | 3.86 |
9082 | 19250 | 1.153765 | CATCTCCGTCGCAGAAGCA | 60.154 | 57.895 | 0.00 | 0.00 | 39.69 | 3.91 |
9083 | 19251 | 1.140589 | ATCTCCGTCGCAGAAGCAG | 59.859 | 57.895 | 0.00 | 0.00 | 39.69 | 4.24 |
9084 | 19252 | 2.897641 | ATCTCCGTCGCAGAAGCAGC | 62.898 | 60.000 | 0.00 | 0.00 | 39.69 | 5.25 |
9085 | 19253 | 3.639541 | CTCCGTCGCAGAAGCAGCT | 62.640 | 63.158 | 0.00 | 0.00 | 39.69 | 4.24 |
9086 | 19254 | 2.740055 | CCGTCGCAGAAGCAGCTT | 60.740 | 61.111 | 7.60 | 7.60 | 39.69 | 3.74 |
9087 | 19255 | 2.320587 | CCGTCGCAGAAGCAGCTTT | 61.321 | 57.895 | 9.62 | 0.00 | 39.69 | 3.51 |
9088 | 19256 | 1.131420 | CGTCGCAGAAGCAGCTTTC | 59.869 | 57.895 | 9.62 | 2.84 | 39.69 | 2.62 |
9089 | 19257 | 1.287730 | CGTCGCAGAAGCAGCTTTCT | 61.288 | 55.000 | 9.62 | 5.24 | 39.69 | 2.52 |
9095 | 19263 | 3.705043 | CAGAAGCAGCTTTCTGTTGTT | 57.295 | 42.857 | 16.78 | 0.00 | 45.70 | 2.83 |
9096 | 19264 | 4.037858 | CAGAAGCAGCTTTCTGTTGTTT | 57.962 | 40.909 | 16.78 | 0.00 | 45.70 | 2.83 |
9097 | 19265 | 3.795101 | CAGAAGCAGCTTTCTGTTGTTTG | 59.205 | 43.478 | 16.78 | 0.00 | 45.70 | 2.93 |
9098 | 19266 | 2.877043 | AGCAGCTTTCTGTTGTTTGG | 57.123 | 45.000 | 0.00 | 0.00 | 42.29 | 3.28 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
72 | 75 | 4.655762 | TCACCTCTAGATCCACAATTCG | 57.344 | 45.455 | 0.00 | 0.00 | 0.00 | 3.34 |
74 | 77 | 8.324191 | TCTAATTCACCTCTAGATCCACAATT | 57.676 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
142 | 145 | 0.530744 | AGCTAAAGCCGACATCGACA | 59.469 | 50.000 | 2.09 | 0.00 | 43.38 | 4.35 |
201 | 481 | 5.064707 | GGTCGCAGCTTGATATTTTAACAGA | 59.935 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
238 | 518 | 3.620929 | TCGTCTAGATTCGCGCTAAAT | 57.379 | 42.857 | 5.56 | 5.08 | 0.00 | 1.40 |
256 | 620 | 0.035439 | AGCAGTTGGGTGGGTTATCG | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
359 | 792 | 4.145052 | GACCTGTGTTCCCTTCAAAAGAT | 58.855 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
450 | 897 | 1.352622 | TGTGTCCCTCTTGCACCCTT | 61.353 | 55.000 | 0.00 | 0.00 | 32.62 | 3.95 |
467 | 914 | 1.537202 | GAAGTCCGCTTGAGCAAATGT | 59.463 | 47.619 | 3.65 | 0.00 | 42.21 | 2.71 |
469 | 916 | 1.168714 | GGAAGTCCGCTTGAGCAAAT | 58.831 | 50.000 | 3.65 | 0.00 | 42.21 | 2.32 |
697 | 1160 | 2.626266 | TCTAAAACGGACTGAGCACTGA | 59.374 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
735 | 1204 | 1.845664 | TTGGGTCCTGCACCTGCTA | 60.846 | 57.895 | 0.00 | 0.00 | 45.95 | 3.49 |
737 | 1206 | 2.985847 | GTTGGGTCCTGCACCTGC | 60.986 | 66.667 | 0.00 | 0.00 | 45.95 | 4.85 |
738 | 1207 | 0.962356 | GATGTTGGGTCCTGCACCTG | 60.962 | 60.000 | 0.00 | 0.00 | 45.95 | 4.00 |
739 | 1208 | 1.380302 | GATGTTGGGTCCTGCACCT | 59.620 | 57.895 | 0.00 | 0.00 | 45.95 | 4.00 |
740 | 1209 | 1.678970 | GGATGTTGGGTCCTGCACC | 60.679 | 63.158 | 0.00 | 0.00 | 45.97 | 5.01 |
741 | 1210 | 0.323725 | ATGGATGTTGGGTCCTGCAC | 60.324 | 55.000 | 0.00 | 0.00 | 36.68 | 4.57 |
742 | 1211 | 0.034186 | GATGGATGTTGGGTCCTGCA | 60.034 | 55.000 | 0.00 | 0.00 | 36.68 | 4.41 |
853 | 1327 | 4.305769 | TGGTGAACAATTTGTAAGCATGC | 58.694 | 39.130 | 10.51 | 10.51 | 0.00 | 4.06 |
1198 | 1710 | 0.740868 | TACATGGCACGCTTGAGCTC | 60.741 | 55.000 | 6.82 | 6.82 | 39.32 | 4.09 |
1573 | 2085 | 0.251341 | ATGTTGGTGTTGCCCTCCTC | 60.251 | 55.000 | 0.00 | 0.00 | 36.04 | 3.71 |
1677 | 2193 | 5.461032 | ACCATATCATCTTCTCGAACTCC | 57.539 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
2130 | 2678 | 4.080129 | AGACACCCATCATGCAATAAGAGT | 60.080 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
2203 | 2757 | 7.959109 | GTGACGGTACAACTTATTAAATGGAAC | 59.041 | 37.037 | 0.00 | 0.00 | 0.00 | 3.62 |
2229 | 2783 | 4.631813 | GGTGACACCATACAAAAGCTAGAG | 59.368 | 45.833 | 20.14 | 0.00 | 38.42 | 2.43 |
2261 | 2815 | 3.129287 | AGTTATCGCAATGCCTTGGAAAG | 59.871 | 43.478 | 0.00 | 0.00 | 45.69 | 2.62 |
2264 | 2818 | 2.418368 | AGTTATCGCAATGCCTTGGA | 57.582 | 45.000 | 0.00 | 0.36 | 32.72 | 3.53 |
2272 | 2826 | 2.288640 | GCGGTACCCTAGTTATCGCAAT | 60.289 | 50.000 | 17.18 | 0.00 | 37.38 | 3.56 |
2276 | 2830 | 3.314553 | CAATGCGGTACCCTAGTTATCG | 58.685 | 50.000 | 6.25 | 0.00 | 0.00 | 2.92 |
2356 | 3022 | 7.661437 | TGGCATAATTATAGTGTCCATGTCTTC | 59.339 | 37.037 | 0.00 | 0.00 | 0.00 | 2.87 |
2385 | 3303 | 3.003482 | CCCATGTGGTTTTGCATTTGTTG | 59.997 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
2386 | 3304 | 3.212685 | CCCATGTGGTTTTGCATTTGTT | 58.787 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
2450 | 3374 | 9.868277 | TGTGTTTTATCAACCCATAATGAATTC | 57.132 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
2541 | 3470 | 3.569701 | AGGTCATGCGACTGTTTTCAATT | 59.430 | 39.130 | 0.00 | 0.00 | 42.21 | 2.32 |
2554 | 3483 | 2.084610 | TTCAGAACAGAGGTCATGCG | 57.915 | 50.000 | 0.00 | 0.00 | 0.00 | 4.73 |
2686 | 3615 | 1.077501 | TGATGGCTTGGGCTAGTGC | 60.078 | 57.895 | 0.00 | 0.00 | 38.73 | 4.40 |
2693 | 3622 | 3.692257 | CTATCCTACTGATGGCTTGGG | 57.308 | 52.381 | 0.00 | 0.00 | 34.76 | 4.12 |
2700 | 3629 | 1.067283 | CCGCAGGCTATCCTACTGATG | 60.067 | 57.143 | 0.00 | 0.00 | 46.14 | 3.07 |
2701 | 3630 | 1.261480 | CCGCAGGCTATCCTACTGAT | 58.739 | 55.000 | 0.00 | 0.00 | 46.14 | 2.90 |
2718 | 3647 | 1.626654 | CGCCAACTACTGACAAGCCG | 61.627 | 60.000 | 0.00 | 0.00 | 0.00 | 5.52 |
2719 | 3648 | 0.602905 | ACGCCAACTACTGACAAGCC | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2729 | 3658 | 0.675083 | TCTTGTTCCGACGCCAACTA | 59.325 | 50.000 | 8.75 | 2.09 | 0.00 | 2.24 |
2736 | 3665 | 2.434359 | GGCCCTCTTGTTCCGACG | 60.434 | 66.667 | 0.00 | 0.00 | 0.00 | 5.12 |
2742 | 3671 | 1.133809 | TGCACTAGGGCCCTCTTGTT | 61.134 | 55.000 | 32.80 | 5.69 | 0.00 | 2.83 |
2746 | 3675 | 2.136878 | CGATGCACTAGGGCCCTCT | 61.137 | 63.158 | 32.80 | 12.68 | 0.00 | 3.69 |
2749 | 3678 | 1.004440 | GATCGATGCACTAGGGCCC | 60.004 | 63.158 | 16.46 | 16.46 | 0.00 | 5.80 |
2756 | 3685 | 3.614092 | ACAATTCAAGGATCGATGCACT | 58.386 | 40.909 | 19.67 | 2.59 | 0.00 | 4.40 |
2760 | 3689 | 4.571984 | TGCAGTACAATTCAAGGATCGATG | 59.428 | 41.667 | 0.54 | 0.00 | 0.00 | 3.84 |
2761 | 3690 | 4.769688 | TGCAGTACAATTCAAGGATCGAT | 58.230 | 39.130 | 0.00 | 0.00 | 0.00 | 3.59 |
2781 | 3710 | 5.283457 | ACTCCAAACTCCATACTAGATGC | 57.717 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
2782 | 3711 | 5.221541 | GGGACTCCAAACTCCATACTAGATG | 60.222 | 48.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2783 | 3712 | 4.902448 | GGGACTCCAAACTCCATACTAGAT | 59.098 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
2785 | 3714 | 3.388350 | GGGGACTCCAAACTCCATACTAG | 59.612 | 52.174 | 0.00 | 0.00 | 35.00 | 2.57 |
2786 | 3715 | 3.246203 | TGGGGACTCCAAACTCCATACTA | 60.246 | 47.826 | 0.00 | 0.00 | 43.84 | 1.82 |
2787 | 3716 | 2.197465 | GGGGACTCCAAACTCCATACT | 58.803 | 52.381 | 0.00 | 0.00 | 35.00 | 2.12 |
2788 | 3717 | 1.913419 | TGGGGACTCCAAACTCCATAC | 59.087 | 52.381 | 0.00 | 0.00 | 43.84 | 2.39 |
2790 | 3719 | 3.197106 | TGGGGACTCCAAACTCCAT | 57.803 | 52.632 | 0.00 | 0.00 | 43.84 | 3.41 |
2791 | 3720 | 4.761163 | TGGGGACTCCAAACTCCA | 57.239 | 55.556 | 0.00 | 0.00 | 43.84 | 3.86 |
2802 | 3785 | 2.399580 | AGCTCCTGTTATAGTGGGGAC | 58.600 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
2824 | 3807 | 7.693969 | AGCTTGAGATTAACATACAAAGCTT | 57.306 | 32.000 | 0.00 | 0.00 | 0.00 | 3.74 |
2867 | 3850 | 3.292460 | AGGATGAGAGAGTTTAGGGACG | 58.708 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2880 | 3865 | 3.105959 | TGTGTGGATCAGAGGATGAGA | 57.894 | 47.619 | 0.00 | 0.00 | 42.53 | 3.27 |
2937 | 3922 | 3.117738 | AGAGATGGTAGCCCAGATTTTGG | 60.118 | 47.826 | 0.00 | 0.00 | 46.15 | 3.28 |
2993 | 3978 | 8.403236 | AGGTGGCGACTATATAAATTTCAAAAC | 58.597 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
3171 | 4389 | 1.844497 | AGGGTTGGGCTCCAGTATTAC | 59.156 | 52.381 | 0.00 | 0.00 | 33.81 | 1.89 |
3208 | 4426 | 3.448686 | ACGATTTGGATGTCGAGATCAC | 58.551 | 45.455 | 22.51 | 13.00 | 40.11 | 3.06 |
3214 | 4432 | 2.521996 | CGTGTACGATTTGGATGTCGA | 58.478 | 47.619 | 0.00 | 0.00 | 43.02 | 4.20 |
3229 | 4447 | 0.406750 | TGACCTCCTTCCTCCGTGTA | 59.593 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3271 | 4491 | 4.141801 | TGGTGAAAGATGGGAATAGTACCG | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
3305 | 4525 | 2.632377 | AGTACATTTGCGGTGGATGAG | 58.368 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
3315 | 4535 | 0.725117 | AACGCCGCTAGTACATTTGC | 59.275 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
3467 | 4699 | 0.953960 | GTTAGGGCGGGGCAATATCG | 60.954 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
3485 | 4717 | 1.544691 | CAGTGGTAGAGGTGTTAGCGT | 59.455 | 52.381 | 0.00 | 0.00 | 0.00 | 5.07 |
3486 | 4718 | 1.736032 | GCAGTGGTAGAGGTGTTAGCG | 60.736 | 57.143 | 0.00 | 0.00 | 0.00 | 4.26 |
3487 | 4719 | 1.275291 | TGCAGTGGTAGAGGTGTTAGC | 59.725 | 52.381 | 0.00 | 0.00 | 0.00 | 3.09 |
3488 | 4720 | 2.353803 | GGTGCAGTGGTAGAGGTGTTAG | 60.354 | 54.545 | 0.00 | 0.00 | 0.00 | 2.34 |
3489 | 4721 | 1.621814 | GGTGCAGTGGTAGAGGTGTTA | 59.378 | 52.381 | 0.00 | 0.00 | 0.00 | 2.41 |
3490 | 4722 | 0.396811 | GGTGCAGTGGTAGAGGTGTT | 59.603 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
3491 | 4723 | 0.762842 | TGGTGCAGTGGTAGAGGTGT | 60.763 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3492 | 4724 | 0.396435 | TTGGTGCAGTGGTAGAGGTG | 59.604 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3493 | 4725 | 1.136828 | TTTGGTGCAGTGGTAGAGGT | 58.863 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3509 | 4741 | 2.949644 | GGGGATTTAGACGGATGGTTTG | 59.050 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
3510 | 4742 | 2.850568 | AGGGGATTTAGACGGATGGTTT | 59.149 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
3594 | 4827 | 7.496747 | AGGATCTTCTGTTCTAGCTGATTAAC | 58.503 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
3595 | 4828 | 7.667575 | AGGATCTTCTGTTCTAGCTGATTAA | 57.332 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3825 | 5090 | 4.466015 | GCATGATTTTTCTAAGGAACCCCA | 59.534 | 41.667 | 0.00 | 0.00 | 33.88 | 4.96 |
3924 | 5202 | 7.703621 | CAGCCTTAATTGTGTGGAGAAATATTG | 59.296 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
4051 | 7043 | 7.399523 | GTTGATGTGAGTCGAAATACCATAAC | 58.600 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
4054 | 7046 | 4.566759 | CGTTGATGTGAGTCGAAATACCAT | 59.433 | 41.667 | 0.00 | 0.00 | 0.00 | 3.55 |
4056 | 7048 | 3.924686 | ACGTTGATGTGAGTCGAAATACC | 59.075 | 43.478 | 0.00 | 0.00 | 0.00 | 2.73 |
4057 | 7049 | 4.857588 | AGACGTTGATGTGAGTCGAAATAC | 59.142 | 41.667 | 0.00 | 0.00 | 38.53 | 1.89 |
4058 | 7050 | 5.055642 | AGACGTTGATGTGAGTCGAAATA | 57.944 | 39.130 | 0.00 | 0.00 | 38.53 | 1.40 |
4059 | 7051 | 3.914312 | AGACGTTGATGTGAGTCGAAAT | 58.086 | 40.909 | 0.00 | 0.00 | 38.53 | 2.17 |
4060 | 7052 | 3.305964 | GAGACGTTGATGTGAGTCGAAA | 58.694 | 45.455 | 0.00 | 0.00 | 38.53 | 3.46 |
4061 | 7053 | 2.664698 | CGAGACGTTGATGTGAGTCGAA | 60.665 | 50.000 | 0.00 | 0.00 | 38.53 | 3.71 |
4063 | 7055 | 1.251355 | CGAGACGTTGATGTGAGTCG | 58.749 | 55.000 | 0.00 | 0.00 | 38.53 | 4.18 |
4147 | 7163 | 8.171840 | GTGTTCTATTTAGTCAACAATGAGCTC | 58.828 | 37.037 | 6.82 | 6.82 | 35.88 | 4.09 |
4226 | 7251 | 7.211966 | AGACGTATTTTGACACTAGTGTAGT | 57.788 | 36.000 | 27.98 | 16.22 | 45.05 | 2.73 |
4227 | 7252 | 9.059485 | GTAAGACGTATTTTGACACTAGTGTAG | 57.941 | 37.037 | 27.98 | 13.57 | 45.05 | 2.74 |
4228 | 7253 | 8.567104 | TGTAAGACGTATTTTGACACTAGTGTA | 58.433 | 33.333 | 27.98 | 13.42 | 45.05 | 2.90 |
4230 | 7255 | 7.862741 | TGTAAGACGTATTTTGACACTAGTG | 57.137 | 36.000 | 21.44 | 21.44 | 0.00 | 2.74 |
4234 | 7259 | 8.879759 | CCATAATGTAAGACGTATTTTGACACT | 58.120 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
4235 | 7260 | 8.120465 | CCCATAATGTAAGACGTATTTTGACAC | 58.880 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
4236 | 7261 | 8.041919 | TCCCATAATGTAAGACGTATTTTGACA | 58.958 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
4237 | 7262 | 8.333186 | GTCCCATAATGTAAGACGTATTTTGAC | 58.667 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
4238 | 7263 | 7.223193 | CGTCCCATAATGTAAGACGTATTTTGA | 59.777 | 37.037 | 0.00 | 0.00 | 43.89 | 2.69 |
4239 | 7264 | 7.342194 | CGTCCCATAATGTAAGACGTATTTTG | 58.658 | 38.462 | 0.00 | 0.00 | 43.89 | 2.44 |
4240 | 7265 | 6.480981 | CCGTCCCATAATGTAAGACGTATTTT | 59.519 | 38.462 | 0.00 | 0.00 | 46.62 | 1.82 |
4241 | 7266 | 5.987347 | CCGTCCCATAATGTAAGACGTATTT | 59.013 | 40.000 | 0.00 | 0.00 | 46.62 | 1.40 |
4242 | 7267 | 5.302568 | TCCGTCCCATAATGTAAGACGTATT | 59.697 | 40.000 | 0.00 | 0.00 | 46.62 | 1.89 |
4243 | 7268 | 4.828939 | TCCGTCCCATAATGTAAGACGTAT | 59.171 | 41.667 | 9.63 | 0.00 | 46.62 | 3.06 |
4244 | 7269 | 4.206375 | TCCGTCCCATAATGTAAGACGTA | 58.794 | 43.478 | 9.63 | 0.00 | 46.62 | 3.57 |
4245 | 7270 | 3.025978 | TCCGTCCCATAATGTAAGACGT | 58.974 | 45.455 | 9.63 | 0.00 | 46.62 | 4.34 |
4247 | 7272 | 3.244112 | CCCTCCGTCCCATAATGTAAGAC | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 3.01 |
4248 | 7273 | 2.969950 | CCCTCCGTCCCATAATGTAAGA | 59.030 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
4249 | 7274 | 2.969950 | TCCCTCCGTCCCATAATGTAAG | 59.030 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
4250 | 7275 | 2.969950 | CTCCCTCCGTCCCATAATGTAA | 59.030 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
4251 | 7276 | 2.090943 | ACTCCCTCCGTCCCATAATGTA | 60.091 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4252 | 7277 | 1.344087 | ACTCCCTCCGTCCCATAATGT | 60.344 | 52.381 | 0.00 | 0.00 | 0.00 | 2.71 |
4253 | 7278 | 1.424638 | ACTCCCTCCGTCCCATAATG | 58.575 | 55.000 | 0.00 | 0.00 | 0.00 | 1.90 |
4254 | 7279 | 3.562108 | ATACTCCCTCCGTCCCATAAT | 57.438 | 47.619 | 0.00 | 0.00 | 0.00 | 1.28 |
4255 | 7280 | 3.339713 | AATACTCCCTCCGTCCCATAA | 57.660 | 47.619 | 0.00 | 0.00 | 0.00 | 1.90 |
4256 | 7281 | 4.687262 | ATAATACTCCCTCCGTCCCATA | 57.313 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
4257 | 7282 | 3.562108 | ATAATACTCCCTCCGTCCCAT | 57.438 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
4258 | 7283 | 3.116862 | AGAATAATACTCCCTCCGTCCCA | 60.117 | 47.826 | 0.00 | 0.00 | 0.00 | 4.37 |
4259 | 7284 | 3.508426 | AGAATAATACTCCCTCCGTCCC | 58.492 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
4260 | 7285 | 4.344390 | ACAAGAATAATACTCCCTCCGTCC | 59.656 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
4261 | 7286 | 5.532664 | ACAAGAATAATACTCCCTCCGTC | 57.467 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
4262 | 7287 | 6.041751 | CCTTACAAGAATAATACTCCCTCCGT | 59.958 | 42.308 | 0.00 | 0.00 | 0.00 | 4.69 |
4263 | 7288 | 6.456501 | CCTTACAAGAATAATACTCCCTCCG | 58.543 | 44.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4264 | 7289 | 6.183361 | TGCCTTACAAGAATAATACTCCCTCC | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
4265 | 7290 | 6.827727 | TGCCTTACAAGAATAATACTCCCTC | 58.172 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4266 | 7291 | 6.824958 | TGCCTTACAAGAATAATACTCCCT | 57.175 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
4267 | 7292 | 7.556635 | AGTTTGCCTTACAAGAATAATACTCCC | 59.443 | 37.037 | 0.00 | 0.00 | 40.06 | 4.30 |
4268 | 7293 | 8.398665 | CAGTTTGCCTTACAAGAATAATACTCC | 58.601 | 37.037 | 0.00 | 0.00 | 40.06 | 3.85 |
4269 | 7294 | 7.910683 | GCAGTTTGCCTTACAAGAATAATACTC | 59.089 | 37.037 | 0.00 | 0.00 | 40.06 | 2.59 |
4270 | 7295 | 7.611855 | AGCAGTTTGCCTTACAAGAATAATACT | 59.388 | 33.333 | 0.00 | 0.00 | 46.52 | 2.12 |
4271 | 7296 | 7.762382 | AGCAGTTTGCCTTACAAGAATAATAC | 58.238 | 34.615 | 0.00 | 0.00 | 46.52 | 1.89 |
4320 | 7348 | 8.645814 | TCACTTGAGACTACCTGTAAATAAGA | 57.354 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
4600 | 7628 | 2.200373 | TGCAGTTTTAGGGAGAAGGC | 57.800 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
4629 | 7657 | 2.034939 | ACATGCCAATGATGTTATGCCG | 59.965 | 45.455 | 0.00 | 0.00 | 37.24 | 5.69 |
4674 | 7702 | 4.906747 | ATTCTTCCAAGTCTTCTGAGCT | 57.093 | 40.909 | 0.00 | 0.00 | 0.00 | 4.09 |
4747 | 7778 | 2.806244 | ACTTGATCCGTGTACTTTGTGC | 59.194 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
4748 | 7779 | 4.772434 | CAACTTGATCCGTGTACTTTGTG | 58.228 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
4759 | 7790 | 1.573932 | TTGCACGCAACTTGATCCG | 59.426 | 52.632 | 0.00 | 0.00 | 0.00 | 4.18 |
4929 | 7964 | 4.777896 | TGCTTGTAAGGAACTCCAGTCTAT | 59.222 | 41.667 | 0.00 | 0.00 | 38.49 | 1.98 |
5020 | 8055 | 4.435121 | CGAAAGTACGTAGGCATGGAAAAC | 60.435 | 45.833 | 0.00 | 0.00 | 0.00 | 2.43 |
5042 | 8077 | 7.531871 | GCTACAACATGTGCAGATTTTATATCG | 59.468 | 37.037 | 0.00 | 0.00 | 0.00 | 2.92 |
5252 | 8287 | 6.037172 | CAGTTATATTTGTTCCCCTGAAGTCG | 59.963 | 42.308 | 0.00 | 0.00 | 0.00 | 4.18 |
5287 | 8322 | 6.854091 | AGTTTGTTAAAACACTAAACCCCA | 57.146 | 33.333 | 4.34 | 0.00 | 46.80 | 4.96 |
5406 | 8441 | 6.567602 | AGCAGTTACCTTCTCTAATCCATT | 57.432 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
5420 | 8455 | 1.439679 | CGGACAAGGAAGCAGTTACC | 58.560 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5438 | 8473 | 1.300388 | AAGCTTTGCCTTTGCTGCG | 60.300 | 52.632 | 0.00 | 0.00 | 37.11 | 5.18 |
5468 | 8503 | 7.676683 | ACCTAAGAATAGCTTGGTAAGATGA | 57.323 | 36.000 | 0.00 | 0.00 | 36.72 | 2.92 |
5503 | 8538 | 3.081804 | CGTTGCCTATCTTTTCCCAGTT | 58.918 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
5511 | 8546 | 4.009675 | TGCTCAATTCGTTGCCTATCTTT | 58.990 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
5513 | 8548 | 3.201290 | CTGCTCAATTCGTTGCCTATCT | 58.799 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
5528 | 8602 | 1.072806 | AGCTCATCAAACACCTGCTCA | 59.927 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
5532 | 8606 | 1.467734 | GCAGAGCTCATCAAACACCTG | 59.532 | 52.381 | 17.77 | 2.04 | 0.00 | 4.00 |
5585 | 9935 | 0.465460 | GCCATCGGCCAAAGTATCCA | 60.465 | 55.000 | 2.24 | 0.00 | 44.06 | 3.41 |
5678 | 10028 | 1.547820 | TCAGGAAGCTGTCTGCAGTAG | 59.452 | 52.381 | 14.67 | 14.21 | 45.94 | 2.57 |
5733 | 10084 | 1.965754 | GCTGGAGCACGGAGGATCTT | 61.966 | 60.000 | 0.00 | 0.00 | 41.59 | 2.40 |
5739 | 10090 | 2.202987 | GATGGCTGGAGCACGGAG | 60.203 | 66.667 | 0.20 | 0.00 | 44.36 | 4.63 |
5740 | 10091 | 2.526450 | CTTGATGGCTGGAGCACGGA | 62.526 | 60.000 | 0.20 | 0.00 | 44.36 | 4.69 |
5784 | 10135 | 0.179000 | GGACTGTGCTGATGGTAGGG | 59.821 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 |
5849 | 10200 | 6.891908 | CCCATTCCACCATCCCTATTAAATAG | 59.108 | 42.308 | 0.00 | 0.00 | 0.00 | 1.73 |
5902 | 10253 | 1.163554 | CTGCAAGACAGGAAAGGCTC | 58.836 | 55.000 | 0.00 | 0.00 | 43.19 | 4.70 |
5923 | 10274 | 0.583917 | GCAGCGGCTTAGCATAAGAC | 59.416 | 55.000 | 6.53 | 0.00 | 40.15 | 3.01 |
6069 | 10420 | 2.568956 | TCATCTCCAGGTCAAGGACTTG | 59.431 | 50.000 | 5.72 | 5.72 | 38.99 | 3.16 |
6129 | 10480 | 2.083774 | CGCCTTCATCTTTTGGCAGTA | 58.916 | 47.619 | 0.00 | 0.00 | 45.13 | 2.74 |
6136 | 10487 | 2.162681 | CTTCCACCGCCTTCATCTTTT | 58.837 | 47.619 | 0.00 | 0.00 | 0.00 | 2.27 |
6141 | 10492 | 1.002134 | CACCTTCCACCGCCTTCAT | 60.002 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
6165 | 10516 | 0.903942 | AGAAAGAGCCTCTGGAGCAG | 59.096 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
6166 | 10517 | 0.901124 | GAGAAAGAGCCTCTGGAGCA | 59.099 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
6180 | 10531 | 5.414789 | TCCATGTTGTTATCCGAGAGAAA | 57.585 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
6242 | 10593 | 1.587547 | GGCTGCAGTATAGCTCCAAC | 58.412 | 55.000 | 16.64 | 0.00 | 40.92 | 3.77 |
6329 | 10680 | 3.664107 | ACTTGCATACGTCTTGACATGT | 58.336 | 40.909 | 0.00 | 0.00 | 0.00 | 3.21 |
6339 | 10690 | 3.895232 | ATCTCCTTGACTTGCATACGT | 57.105 | 42.857 | 0.00 | 0.00 | 0.00 | 3.57 |
6341 | 10692 | 7.792374 | TGAATTATCTCCTTGACTTGCATAC | 57.208 | 36.000 | 0.00 | 0.00 | 0.00 | 2.39 |
6348 | 10699 | 7.559170 | CCATTTCCTTGAATTATCTCCTTGACT | 59.441 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
6351 | 10702 | 7.651027 | ACCATTTCCTTGAATTATCTCCTTG | 57.349 | 36.000 | 0.00 | 0.00 | 0.00 | 3.61 |
6423 | 10774 | 6.817765 | TTTACCTCTGGACATGAATGAAAC | 57.182 | 37.500 | 0.00 | 0.00 | 0.00 | 2.78 |
6428 | 10782 | 6.662755 | TGCTAATTTACCTCTGGACATGAAT | 58.337 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6455 | 10829 | 8.425577 | AGATAGACAAATTAAGATGAACCACG | 57.574 | 34.615 | 0.00 | 0.00 | 0.00 | 4.94 |
6503 | 10884 | 4.491676 | TGATCGAAGGTAGAAAACGAAGG | 58.508 | 43.478 | 0.00 | 0.00 | 36.62 | 3.46 |
6507 | 10892 | 6.034591 | ACATACTGATCGAAGGTAGAAAACG | 58.965 | 40.000 | 0.00 | 0.00 | 0.00 | 3.60 |
6627 | 13756 | 7.149973 | CCGATCAATCTATTACTCCGGTAAAA | 58.850 | 38.462 | 0.00 | 0.00 | 40.69 | 1.52 |
6629 | 13758 | 5.336213 | GCCGATCAATCTATTACTCCGGTAA | 60.336 | 44.000 | 0.00 | 0.00 | 41.42 | 2.85 |
6632 | 13761 | 3.193691 | AGCCGATCAATCTATTACTCCGG | 59.806 | 47.826 | 0.00 | 0.00 | 0.00 | 5.14 |
6633 | 13762 | 4.442375 | AGCCGATCAATCTATTACTCCG | 57.558 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
6634 | 13763 | 8.779354 | ATAAAAGCCGATCAATCTATTACTCC | 57.221 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
6635 | 13764 | 9.424319 | TGATAAAAGCCGATCAATCTATTACTC | 57.576 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
6646 | 13880 | 7.416213 | CCCTTACAAAATGATAAAAGCCGATCA | 60.416 | 37.037 | 0.00 | 0.00 | 36.54 | 2.92 |
6650 | 13884 | 4.803613 | GCCCTTACAAAATGATAAAAGCCG | 59.196 | 41.667 | 0.00 | 0.00 | 0.00 | 5.52 |
6652 | 13886 | 8.251026 | AGTTAGCCCTTACAAAATGATAAAAGC | 58.749 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
6670 | 13906 | 0.532115 | CATTGGCCAACAGTTAGCCC | 59.468 | 55.000 | 23.27 | 4.92 | 46.55 | 5.19 |
6676 | 13912 | 2.292828 | AAGTAGCATTGGCCAACAGT | 57.707 | 45.000 | 23.27 | 10.50 | 42.56 | 3.55 |
6677 | 13913 | 2.821969 | AGAAAGTAGCATTGGCCAACAG | 59.178 | 45.455 | 23.27 | 17.77 | 42.56 | 3.16 |
6683 | 13919 | 5.578336 | GGAAAAATCAGAAAGTAGCATTGGC | 59.422 | 40.000 | 0.00 | 0.00 | 41.61 | 4.52 |
6704 | 16304 | 3.726557 | AGCAAATGATGGACTCTGGAA | 57.273 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
6705 | 16305 | 4.225942 | ACTTAGCAAATGATGGACTCTGGA | 59.774 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
6708 | 16308 | 7.831193 | ACATAAACTTAGCAAATGATGGACTCT | 59.169 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
6740 | 16341 | 4.576879 | CAGGGGAAGTAGGAAACAAGTAC | 58.423 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
6774 | 16436 | 8.149647 | CAGAGCTAAAATAGTGAGATCCAGAAT | 58.850 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
6814 | 16483 | 0.743097 | GATCCATGACTTGCAAGGCC | 59.257 | 55.000 | 29.26 | 19.90 | 35.34 | 5.19 |
7088 | 16763 | 2.431419 | TGGTTGACTCGTTAACACCAGA | 59.569 | 45.455 | 8.69 | 0.00 | 31.56 | 3.86 |
7089 | 16764 | 2.828877 | TGGTTGACTCGTTAACACCAG | 58.171 | 47.619 | 8.69 | 2.65 | 31.56 | 4.00 |
7261 | 16939 | 7.047850 | GTCGCACTTTGATACAAATGGGACA | 62.048 | 44.000 | 26.33 | 11.50 | 44.71 | 4.02 |
7262 | 16940 | 3.438781 | TCGCACTTTGATACAAATGGGAC | 59.561 | 43.478 | 14.85 | 0.00 | 0.00 | 4.46 |
7274 | 16952 | 2.037121 | TCTTCTCATGGTCGCACTTTGA | 59.963 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
7279 | 16957 | 2.143122 | TGTTTCTTCTCATGGTCGCAC | 58.857 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
7297 | 16978 | 1.347050 | ACTTGCATCTGAGTGCTCTGT | 59.653 | 47.619 | 11.45 | 6.54 | 45.27 | 3.41 |
7349 | 17030 | 5.661312 | ACTGGTTCATGCTATCTACCTTGTA | 59.339 | 40.000 | 0.00 | 0.00 | 0.00 | 2.41 |
7351 | 17032 | 5.028549 | ACTGGTTCATGCTATCTACCTTG | 57.971 | 43.478 | 0.00 | 0.00 | 0.00 | 3.61 |
7352 | 17033 | 4.202161 | CGACTGGTTCATGCTATCTACCTT | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.50 |
7353 | 17034 | 3.319405 | CGACTGGTTCATGCTATCTACCT | 59.681 | 47.826 | 0.00 | 0.00 | 0.00 | 3.08 |
7409 | 17102 | 0.969409 | AGCCAAAAGCCCATCTCAGC | 60.969 | 55.000 | 0.00 | 0.00 | 45.47 | 4.26 |
7416 | 17109 | 1.829523 | GCCATTCAGCCAAAAGCCCA | 61.830 | 55.000 | 0.00 | 0.00 | 45.47 | 5.36 |
7451 | 17144 | 4.281941 | CCCGATTTCTGATCCATCTACTGA | 59.718 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
7469 | 17162 | 3.008594 | TCGCCAATTATGTATTCCCCGAT | 59.991 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
7489 | 17182 | 4.434520 | GGAGAAGAGGGTAACTTTCATCG | 58.565 | 47.826 | 0.00 | 0.00 | 0.00 | 3.84 |
7494 | 17187 | 3.267031 | CCATGGGAGAAGAGGGTAACTTT | 59.733 | 47.826 | 2.85 | 0.00 | 0.00 | 2.66 |
7495 | 17188 | 2.846827 | CCATGGGAGAAGAGGGTAACTT | 59.153 | 50.000 | 2.85 | 0.00 | 0.00 | 2.66 |
7496 | 17189 | 2.482494 | CCATGGGAGAAGAGGGTAACT | 58.518 | 52.381 | 2.85 | 0.00 | 0.00 | 2.24 |
7497 | 17190 | 1.134068 | GCCATGGGAGAAGAGGGTAAC | 60.134 | 57.143 | 15.13 | 0.00 | 0.00 | 2.50 |
7571 | 17509 | 1.004277 | GTCGTTGCAGAGTGTCTCCG | 61.004 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
7601 | 17539 | 0.618458 | AACCTAGCCATCGCCTTCAA | 59.382 | 50.000 | 0.00 | 0.00 | 34.57 | 2.69 |
7610 | 17551 | 1.075374 | TGTGCCTTTGAACCTAGCCAT | 59.925 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
7615 | 17556 | 3.181434 | ACTTCCATGTGCCTTTGAACCTA | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 3.08 |
7672 | 17613 | 7.255569 | CACGGATTATCTTAACTACACTGTCA | 58.744 | 38.462 | 0.00 | 0.00 | 0.00 | 3.58 |
7679 | 17620 | 4.448060 | GCAGGCACGGATTATCTTAACTAC | 59.552 | 45.833 | 0.00 | 0.00 | 0.00 | 2.73 |
7709 | 17650 | 7.381323 | TCCATATCTATGACTATGTTGTGCAG | 58.619 | 38.462 | 0.00 | 0.00 | 35.75 | 4.41 |
7714 | 17655 | 8.975295 | TCATCCTCCATATCTATGACTATGTTG | 58.025 | 37.037 | 0.00 | 0.00 | 35.75 | 3.33 |
7760 | 17701 | 1.211457 | GCAGTCCCAATCCTCAGATGT | 59.789 | 52.381 | 0.00 | 0.00 | 31.29 | 3.06 |
7761 | 17702 | 1.489649 | AGCAGTCCCAATCCTCAGATG | 59.510 | 52.381 | 0.00 | 0.00 | 31.29 | 2.90 |
7763 | 17704 | 2.550277 | TAGCAGTCCCAATCCTCAGA | 57.450 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
7777 | 17721 | 1.156645 | GGCGCACTTCCTCATAGCAG | 61.157 | 60.000 | 10.83 | 0.00 | 0.00 | 4.24 |
7980 | 17975 | 1.342672 | ATCCACCGGGCCGACTAAAT | 61.343 | 55.000 | 30.79 | 11.16 | 0.00 | 1.40 |
8004 | 18003 | 0.971447 | AGCTACTTCACCGTCCTCCC | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
8013 | 18024 | 0.519077 | GCCTGTTGCAGCTACTTCAC | 59.481 | 55.000 | 8.50 | 0.00 | 40.77 | 3.18 |
8049 | 18060 | 2.550180 | GTTGTCTCTGCTTCTTGTTCCC | 59.450 | 50.000 | 0.00 | 0.00 | 0.00 | 3.97 |
8127 | 18150 | 6.992063 | AAGCAGGAAAATGTACTATCAGTG | 57.008 | 37.500 | 0.00 | 0.00 | 0.00 | 3.66 |
8134 | 18157 | 7.283354 | GCCTAGAATAAAGCAGGAAAATGTACT | 59.717 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
8176 | 18200 | 4.290985 | TGGAATTGAGGGAATACCAAGACA | 59.709 | 41.667 | 0.00 | 0.00 | 43.89 | 3.41 |
8214 | 18366 | 0.586319 | TGTTCTGCTTAACACGCTGC | 59.414 | 50.000 | 0.98 | 0.00 | 34.50 | 5.25 |
8215 | 18367 | 2.300623 | GTGTTCTGCTTAACACGCTG | 57.699 | 50.000 | 15.77 | 0.00 | 46.88 | 5.18 |
8247 | 18402 | 7.448748 | AAACAAACTACACAAGAGTTTCAGT | 57.551 | 32.000 | 0.00 | 0.00 | 43.59 | 3.41 |
8286 | 18441 | 7.277174 | AGCAGCTAAGTTTATTTTTGTCTGT | 57.723 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
8573 | 18736 | 8.786826 | AAAGCTTACTGCACATACATAAAGTA | 57.213 | 30.769 | 0.00 | 0.00 | 45.94 | 2.24 |
8583 | 18746 | 4.651778 | TCCAGTTAAAGCTTACTGCACAT | 58.348 | 39.130 | 19.74 | 0.00 | 45.94 | 3.21 |
8660 | 18828 | 6.183360 | CCATTACGTTTGAGAATCCTTCAGTC | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
8668 | 18836 | 3.689649 | ACCTGCCATTACGTTTGAGAATC | 59.310 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
8672 | 18840 | 2.351726 | GCTACCTGCCATTACGTTTGAG | 59.648 | 50.000 | 0.00 | 0.00 | 35.15 | 3.02 |
8673 | 18841 | 2.352388 | GCTACCTGCCATTACGTTTGA | 58.648 | 47.619 | 0.00 | 0.00 | 35.15 | 2.69 |
8695 | 18863 | 4.486125 | TGCACCTGACATACACATACAT | 57.514 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
8699 | 18867 | 3.354948 | ACATGCACCTGACATACACAT | 57.645 | 42.857 | 0.00 | 0.00 | 0.00 | 3.21 |
8701 | 18869 | 3.366273 | CCAAACATGCACCTGACATACAC | 60.366 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
8703 | 18871 | 2.164219 | CCCAAACATGCACCTGACATAC | 59.836 | 50.000 | 0.00 | 0.00 | 0.00 | 2.39 |
8708 | 18876 | 1.907807 | GGCCCAAACATGCACCTGA | 60.908 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
8709 | 18877 | 2.162338 | CTGGCCCAAACATGCACCTG | 62.162 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
8711 | 18879 | 0.897863 | TACTGGCCCAAACATGCACC | 60.898 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
8712 | 18880 | 0.965439 | TTACTGGCCCAAACATGCAC | 59.035 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
8713 | 18881 | 1.824230 | GATTACTGGCCCAAACATGCA | 59.176 | 47.619 | 0.00 | 0.00 | 0.00 | 3.96 |
8714 | 18882 | 2.102578 | AGATTACTGGCCCAAACATGC | 58.897 | 47.619 | 0.00 | 0.00 | 0.00 | 4.06 |
8715 | 18883 | 4.019174 | AGAAGATTACTGGCCCAAACATG | 58.981 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
8731 | 18899 | 9.171877 | GTCAATAGTCCTTGAATTGAAGAAGAT | 57.828 | 33.333 | 6.19 | 0.00 | 40.32 | 2.40 |
8733 | 18901 | 7.331934 | TCGTCAATAGTCCTTGAATTGAAGAAG | 59.668 | 37.037 | 6.19 | 0.00 | 41.70 | 2.85 |
8736 | 18904 | 6.968131 | TCGTCAATAGTCCTTGAATTGAAG | 57.032 | 37.500 | 0.00 | 0.00 | 40.32 | 3.02 |
8749 | 18917 | 3.769844 | ACATCAGGGACTTCGTCAATAGT | 59.230 | 43.478 | 0.00 | 0.00 | 34.60 | 2.12 |
8771 | 18939 | 8.849168 | TGCTCTGAAATTCTAGTTCATTTTTGA | 58.151 | 29.630 | 0.00 | 0.00 | 34.59 | 2.69 |
8775 | 18943 | 8.627208 | TCTTGCTCTGAAATTCTAGTTCATTT | 57.373 | 30.769 | 0.00 | 0.00 | 34.59 | 2.32 |
8776 | 18944 | 7.336427 | CCTCTTGCTCTGAAATTCTAGTTCATT | 59.664 | 37.037 | 0.00 | 0.00 | 34.59 | 2.57 |
8777 | 18945 | 6.822676 | CCTCTTGCTCTGAAATTCTAGTTCAT | 59.177 | 38.462 | 0.00 | 0.00 | 34.59 | 2.57 |
8778 | 18946 | 6.169094 | CCTCTTGCTCTGAAATTCTAGTTCA | 58.831 | 40.000 | 0.00 | 0.00 | 33.97 | 3.18 |
8779 | 18947 | 5.584251 | CCCTCTTGCTCTGAAATTCTAGTTC | 59.416 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
8780 | 18948 | 5.495640 | CCCTCTTGCTCTGAAATTCTAGTT | 58.504 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
8781 | 18949 | 4.625083 | GCCCTCTTGCTCTGAAATTCTAGT | 60.625 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
8782 | 18950 | 3.876320 | GCCCTCTTGCTCTGAAATTCTAG | 59.124 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
8783 | 18951 | 3.370953 | GGCCCTCTTGCTCTGAAATTCTA | 60.371 | 47.826 | 0.00 | 0.00 | 0.00 | 2.10 |
8784 | 18952 | 2.620108 | GGCCCTCTTGCTCTGAAATTCT | 60.620 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
8785 | 18953 | 1.747924 | GGCCCTCTTGCTCTGAAATTC | 59.252 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
8786 | 18954 | 1.844687 | GGCCCTCTTGCTCTGAAATT | 58.155 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
8787 | 18955 | 0.393537 | CGGCCCTCTTGCTCTGAAAT | 60.394 | 55.000 | 0.00 | 0.00 | 0.00 | 2.17 |
8788 | 18956 | 1.003355 | CGGCCCTCTTGCTCTGAAA | 60.003 | 57.895 | 0.00 | 0.00 | 0.00 | 2.69 |
8789 | 18957 | 2.665000 | CGGCCCTCTTGCTCTGAA | 59.335 | 61.111 | 0.00 | 0.00 | 0.00 | 3.02 |
8790 | 18958 | 4.087892 | GCGGCCCTCTTGCTCTGA | 62.088 | 66.667 | 0.00 | 0.00 | 0.00 | 3.27 |
8791 | 18959 | 3.694058 | ATGCGGCCCTCTTGCTCTG | 62.694 | 63.158 | 0.00 | 0.00 | 0.00 | 3.35 |
8792 | 18960 | 2.490270 | AAATGCGGCCCTCTTGCTCT | 62.490 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
8802 | 18970 | 1.102978 | ATGGAACTACAAATGCGGCC | 58.897 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
8828 | 18996 | 7.173032 | TGATGGAAGCTGCTATTTCATCATAT | 58.827 | 34.615 | 17.43 | 4.13 | 0.00 | 1.78 |
8834 | 19002 | 4.951715 | ACAATGATGGAAGCTGCTATTTCA | 59.048 | 37.500 | 0.90 | 4.83 | 0.00 | 2.69 |
8835 | 19003 | 5.511234 | ACAATGATGGAAGCTGCTATTTC | 57.489 | 39.130 | 0.90 | 0.00 | 0.00 | 2.17 |
8836 | 19004 | 5.927281 | AACAATGATGGAAGCTGCTATTT | 57.073 | 34.783 | 0.90 | 0.00 | 0.00 | 1.40 |
8837 | 19005 | 5.887598 | TGTAACAATGATGGAAGCTGCTATT | 59.112 | 36.000 | 0.90 | 0.00 | 0.00 | 1.73 |
8845 | 19013 | 3.181507 | CGGTGCTGTAACAATGATGGAAG | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
8848 | 19016 | 2.083774 | ACGGTGCTGTAACAATGATGG | 58.916 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
8862 | 19030 | 3.896648 | TTCAATTCAGAGAAACGGTGC | 57.103 | 42.857 | 0.00 | 0.00 | 0.00 | 5.01 |
8885 | 19053 | 1.202348 | GATTACTGGGTTGCTTGTGGC | 59.798 | 52.381 | 0.00 | 0.00 | 42.22 | 5.01 |
8886 | 19054 | 2.795329 | AGATTACTGGGTTGCTTGTGG | 58.205 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
8887 | 19055 | 4.832248 | TCTAGATTACTGGGTTGCTTGTG | 58.168 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
8888 | 19056 | 5.426833 | AGATCTAGATTACTGGGTTGCTTGT | 59.573 | 40.000 | 6.70 | 0.00 | 0.00 | 3.16 |
8939 | 19107 | 1.067142 | GTGGCCGTATGACTGACAGAA | 60.067 | 52.381 | 10.08 | 0.00 | 0.00 | 3.02 |
8947 | 19115 | 1.160329 | GCCTGATGTGGCCGTATGAC | 61.160 | 60.000 | 0.00 | 0.00 | 46.82 | 3.06 |
8957 | 19125 | 4.518211 | AGAAAGTTTCTTCTGCCTGATGTG | 59.482 | 41.667 | 12.50 | 0.00 | 36.36 | 3.21 |
8958 | 19126 | 4.518211 | CAGAAAGTTTCTTCTGCCTGATGT | 59.482 | 41.667 | 15.60 | 0.00 | 44.24 | 3.06 |
8959 | 19127 | 5.044428 | CAGAAAGTTTCTTCTGCCTGATG | 57.956 | 43.478 | 15.60 | 0.00 | 44.24 | 3.07 |
8971 | 19139 | 8.807667 | ACATGATTTGATTGACAGAAAGTTTC | 57.192 | 30.769 | 7.57 | 7.57 | 0.00 | 2.78 |
8987 | 19155 | 9.294030 | GCTGATTTAGTCCTTTTACATGATTTG | 57.706 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
8988 | 19156 | 9.023962 | TGCTGATTTAGTCCTTTTACATGATTT | 57.976 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
8989 | 19157 | 8.579850 | TGCTGATTTAGTCCTTTTACATGATT | 57.420 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
8990 | 19158 | 8.757982 | ATGCTGATTTAGTCCTTTTACATGAT | 57.242 | 30.769 | 0.00 | 0.00 | 0.00 | 2.45 |
8991 | 19159 | 7.828717 | TGATGCTGATTTAGTCCTTTTACATGA | 59.171 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
8992 | 19160 | 7.988737 | TGATGCTGATTTAGTCCTTTTACATG | 58.011 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
8993 | 19161 | 8.462016 | GTTGATGCTGATTTAGTCCTTTTACAT | 58.538 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
8994 | 19162 | 7.665559 | AGTTGATGCTGATTTAGTCCTTTTACA | 59.334 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
8995 | 19163 | 8.045176 | AGTTGATGCTGATTTAGTCCTTTTAC | 57.955 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
8996 | 19164 | 7.882791 | TGAGTTGATGCTGATTTAGTCCTTTTA | 59.117 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
8997 | 19165 | 6.716628 | TGAGTTGATGCTGATTTAGTCCTTTT | 59.283 | 34.615 | 0.00 | 0.00 | 0.00 | 2.27 |
8998 | 19166 | 6.240894 | TGAGTTGATGCTGATTTAGTCCTTT | 58.759 | 36.000 | 0.00 | 0.00 | 0.00 | 3.11 |
8999 | 19167 | 5.809001 | TGAGTTGATGCTGATTTAGTCCTT | 58.191 | 37.500 | 0.00 | 0.00 | 0.00 | 3.36 |
9000 | 19168 | 5.188555 | TCTGAGTTGATGCTGATTTAGTCCT | 59.811 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
9001 | 19169 | 5.423015 | TCTGAGTTGATGCTGATTTAGTCC | 58.577 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
9002 | 19170 | 5.006552 | GCTCTGAGTTGATGCTGATTTAGTC | 59.993 | 44.000 | 6.53 | 0.00 | 0.00 | 2.59 |
9003 | 19171 | 4.874966 | GCTCTGAGTTGATGCTGATTTAGT | 59.125 | 41.667 | 6.53 | 0.00 | 0.00 | 2.24 |
9004 | 19172 | 5.117584 | AGCTCTGAGTTGATGCTGATTTAG | 58.882 | 41.667 | 6.53 | 0.00 | 32.32 | 1.85 |
9005 | 19173 | 5.095145 | AGCTCTGAGTTGATGCTGATTTA | 57.905 | 39.130 | 6.53 | 0.00 | 32.32 | 1.40 |
9006 | 19174 | 3.940221 | GAGCTCTGAGTTGATGCTGATTT | 59.060 | 43.478 | 6.43 | 0.00 | 33.83 | 2.17 |
9007 | 19175 | 3.533547 | GAGCTCTGAGTTGATGCTGATT | 58.466 | 45.455 | 6.43 | 0.00 | 33.83 | 2.57 |
9008 | 19176 | 2.158928 | GGAGCTCTGAGTTGATGCTGAT | 60.159 | 50.000 | 14.64 | 0.00 | 33.83 | 2.90 |
9009 | 19177 | 1.206610 | GGAGCTCTGAGTTGATGCTGA | 59.793 | 52.381 | 14.64 | 0.00 | 33.83 | 4.26 |
9010 | 19178 | 1.654317 | GGAGCTCTGAGTTGATGCTG | 58.346 | 55.000 | 14.64 | 0.00 | 33.83 | 4.41 |
9011 | 19179 | 0.175302 | CGGAGCTCTGAGTTGATGCT | 59.825 | 55.000 | 18.26 | 0.00 | 36.63 | 3.79 |
9012 | 19180 | 0.108424 | ACGGAGCTCTGAGTTGATGC | 60.108 | 55.000 | 29.29 | 0.00 | 0.00 | 3.91 |
9013 | 19181 | 2.266554 | GAACGGAGCTCTGAGTTGATG | 58.733 | 52.381 | 29.29 | 3.18 | 0.00 | 3.07 |
9014 | 19182 | 1.135257 | CGAACGGAGCTCTGAGTTGAT | 60.135 | 52.381 | 29.29 | 2.02 | 0.00 | 2.57 |
9015 | 19183 | 0.241213 | CGAACGGAGCTCTGAGTTGA | 59.759 | 55.000 | 29.29 | 0.00 | 0.00 | 3.18 |
9016 | 19184 | 0.241213 | TCGAACGGAGCTCTGAGTTG | 59.759 | 55.000 | 29.29 | 18.30 | 0.00 | 3.16 |
9017 | 19185 | 0.241481 | GTCGAACGGAGCTCTGAGTT | 59.759 | 55.000 | 29.29 | 22.60 | 0.00 | 3.01 |
9018 | 19186 | 1.877367 | GTCGAACGGAGCTCTGAGT | 59.123 | 57.895 | 29.29 | 15.79 | 0.00 | 3.41 |
9019 | 19187 | 1.226156 | CGTCGAACGGAGCTCTGAG | 60.226 | 63.158 | 29.29 | 18.14 | 38.08 | 3.35 |
9020 | 19188 | 1.232621 | TTCGTCGAACGGAGCTCTGA | 61.233 | 55.000 | 29.29 | 3.26 | 42.81 | 3.27 |
9021 | 19189 | 0.386858 | TTTCGTCGAACGGAGCTCTG | 60.387 | 55.000 | 21.32 | 21.32 | 42.81 | 3.35 |
9022 | 19190 | 0.526662 | ATTTCGTCGAACGGAGCTCT | 59.473 | 50.000 | 14.64 | 0.00 | 42.81 | 4.09 |
9023 | 19191 | 0.915227 | GATTTCGTCGAACGGAGCTC | 59.085 | 55.000 | 7.29 | 4.71 | 42.81 | 4.09 |
9024 | 19192 | 0.526662 | AGATTTCGTCGAACGGAGCT | 59.473 | 50.000 | 7.29 | 0.00 | 42.81 | 4.09 |
9025 | 19193 | 2.184385 | TAGATTTCGTCGAACGGAGC | 57.816 | 50.000 | 7.29 | 0.00 | 42.81 | 4.70 |
9026 | 19194 | 3.948851 | TGATAGATTTCGTCGAACGGAG | 58.051 | 45.455 | 7.29 | 0.00 | 42.81 | 4.63 |
9027 | 19195 | 4.287720 | CATGATAGATTTCGTCGAACGGA | 58.712 | 43.478 | 7.29 | 0.00 | 42.81 | 4.69 |
9028 | 19196 | 3.121328 | GCATGATAGATTTCGTCGAACGG | 60.121 | 47.826 | 7.29 | 0.00 | 42.81 | 4.44 |
9029 | 19197 | 3.485743 | TGCATGATAGATTTCGTCGAACG | 59.514 | 43.478 | 7.29 | 0.00 | 44.19 | 3.95 |
9030 | 19198 | 4.267690 | TGTGCATGATAGATTTCGTCGAAC | 59.732 | 41.667 | 7.29 | 0.00 | 0.00 | 3.95 |
9031 | 19199 | 4.429108 | TGTGCATGATAGATTTCGTCGAA | 58.571 | 39.130 | 2.90 | 2.90 | 0.00 | 3.71 |
9032 | 19200 | 4.040445 | TGTGCATGATAGATTTCGTCGA | 57.960 | 40.909 | 0.00 | 0.00 | 0.00 | 4.20 |
9033 | 19201 | 4.683320 | AGATGTGCATGATAGATTTCGTCG | 59.317 | 41.667 | 0.00 | 0.00 | 0.00 | 5.12 |
9034 | 19202 | 6.201615 | TGAAGATGTGCATGATAGATTTCGTC | 59.798 | 38.462 | 0.00 | 0.00 | 0.00 | 4.20 |
9035 | 19203 | 6.051074 | TGAAGATGTGCATGATAGATTTCGT | 58.949 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
9036 | 19204 | 6.535274 | TGAAGATGTGCATGATAGATTTCG | 57.465 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
9037 | 19205 | 6.372185 | GCTGAAGATGTGCATGATAGATTTC | 58.628 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
9038 | 19206 | 5.049612 | CGCTGAAGATGTGCATGATAGATTT | 60.050 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
9039 | 19207 | 4.451435 | CGCTGAAGATGTGCATGATAGATT | 59.549 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
9040 | 19208 | 3.995048 | CGCTGAAGATGTGCATGATAGAT | 59.005 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
9041 | 19209 | 3.387397 | CGCTGAAGATGTGCATGATAGA | 58.613 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
9042 | 19210 | 2.096367 | GCGCTGAAGATGTGCATGATAG | 60.096 | 50.000 | 0.00 | 0.00 | 40.28 | 2.08 |
9043 | 19211 | 1.869132 | GCGCTGAAGATGTGCATGATA | 59.131 | 47.619 | 0.00 | 0.00 | 40.28 | 2.15 |
9044 | 19212 | 0.661552 | GCGCTGAAGATGTGCATGAT | 59.338 | 50.000 | 0.00 | 0.00 | 40.28 | 2.45 |
9045 | 19213 | 1.371337 | GGCGCTGAAGATGTGCATGA | 61.371 | 55.000 | 7.64 | 0.00 | 42.10 | 3.07 |
9046 | 19214 | 1.063649 | GGCGCTGAAGATGTGCATG | 59.936 | 57.895 | 7.64 | 0.00 | 42.10 | 4.06 |
9047 | 19215 | 0.750546 | ATGGCGCTGAAGATGTGCAT | 60.751 | 50.000 | 7.64 | 0.00 | 42.10 | 3.96 |
9048 | 19216 | 1.371337 | GATGGCGCTGAAGATGTGCA | 61.371 | 55.000 | 7.64 | 0.00 | 42.10 | 4.57 |
9049 | 19217 | 1.094073 | AGATGGCGCTGAAGATGTGC | 61.094 | 55.000 | 7.64 | 0.00 | 39.88 | 4.57 |
9050 | 19218 | 0.935898 | GAGATGGCGCTGAAGATGTG | 59.064 | 55.000 | 7.64 | 0.00 | 0.00 | 3.21 |
9051 | 19219 | 0.179062 | GGAGATGGCGCTGAAGATGT | 60.179 | 55.000 | 7.64 | 0.00 | 0.00 | 3.06 |
9052 | 19220 | 1.220169 | CGGAGATGGCGCTGAAGATG | 61.220 | 60.000 | 7.64 | 0.00 | 0.00 | 2.90 |
9053 | 19221 | 1.068753 | CGGAGATGGCGCTGAAGAT | 59.931 | 57.895 | 7.64 | 0.00 | 0.00 | 2.40 |
9054 | 19222 | 2.284798 | GACGGAGATGGCGCTGAAGA | 62.285 | 60.000 | 7.64 | 0.00 | 0.00 | 2.87 |
9055 | 19223 | 1.880340 | GACGGAGATGGCGCTGAAG | 60.880 | 63.158 | 7.64 | 0.00 | 0.00 | 3.02 |
9056 | 19224 | 2.184322 | GACGGAGATGGCGCTGAA | 59.816 | 61.111 | 7.64 | 0.00 | 0.00 | 3.02 |
9057 | 19225 | 4.193334 | CGACGGAGATGGCGCTGA | 62.193 | 66.667 | 7.64 | 0.00 | 0.00 | 4.26 |
9061 | 19229 | 3.699955 | TTCTGCGACGGAGATGGCG | 62.700 | 63.158 | 20.14 | 0.00 | 0.00 | 5.69 |
9062 | 19230 | 1.880340 | CTTCTGCGACGGAGATGGC | 60.880 | 63.158 | 20.14 | 0.00 | 0.00 | 4.40 |
9063 | 19231 | 1.880340 | GCTTCTGCGACGGAGATGG | 60.880 | 63.158 | 26.03 | 19.48 | 0.00 | 3.51 |
9064 | 19232 | 1.144565 | CTGCTTCTGCGACGGAGATG | 61.145 | 60.000 | 20.14 | 21.53 | 43.34 | 2.90 |
9065 | 19233 | 1.140589 | CTGCTTCTGCGACGGAGAT | 59.859 | 57.895 | 20.14 | 0.00 | 43.34 | 2.75 |
9066 | 19234 | 2.568612 | CTGCTTCTGCGACGGAGA | 59.431 | 61.111 | 15.63 | 15.63 | 43.34 | 3.71 |
9067 | 19235 | 3.184683 | GCTGCTTCTGCGACGGAG | 61.185 | 66.667 | 10.48 | 10.48 | 43.34 | 4.63 |
9068 | 19236 | 2.715532 | AAAGCTGCTTCTGCGACGGA | 62.716 | 55.000 | 16.28 | 0.00 | 43.34 | 4.69 |
9069 | 19237 | 2.233007 | GAAAGCTGCTTCTGCGACGG | 62.233 | 60.000 | 16.28 | 0.00 | 43.34 | 4.79 |
9070 | 19238 | 1.131420 | GAAAGCTGCTTCTGCGACG | 59.869 | 57.895 | 16.28 | 0.00 | 43.34 | 5.12 |
9071 | 19239 | 0.165511 | CAGAAAGCTGCTTCTGCGAC | 59.834 | 55.000 | 16.28 | 3.88 | 44.24 | 5.19 |
9072 | 19240 | 2.536725 | CAGAAAGCTGCTTCTGCGA | 58.463 | 52.632 | 16.28 | 0.00 | 44.24 | 5.10 |
9076 | 19244 | 3.181483 | CCAAACAACAGAAAGCTGCTTCT | 60.181 | 43.478 | 16.28 | 11.38 | 46.26 | 2.85 |
9077 | 19245 | 3.118542 | CCAAACAACAGAAAGCTGCTTC | 58.881 | 45.455 | 16.28 | 9.28 | 46.26 | 3.86 |
9078 | 19246 | 3.169355 | CCAAACAACAGAAAGCTGCTT | 57.831 | 42.857 | 9.53 | 9.53 | 46.26 | 3.91 |
9079 | 19247 | 2.877043 | CCAAACAACAGAAAGCTGCT | 57.123 | 45.000 | 0.00 | 0.00 | 46.26 | 4.24 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.