Multiple sequence alignment - TraesCS6B01G068300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G068300 chr6B 100.000 3485 0 0 1 3485 46091848 46095332 0.000000e+00 6436.0
1 TraesCS6B01G068300 chr6B 94.483 1595 84 3 1034 2628 46072333 46073923 0.000000e+00 2455.0
2 TraesCS6B01G068300 chr6B 86.663 1822 190 30 721 2522 46389932 46391720 0.000000e+00 1969.0
3 TraesCS6B01G068300 chr6B 88.979 1597 161 10 929 2519 45983382 45984969 0.000000e+00 1960.0
4 TraesCS6B01G068300 chr6B 98.434 447 6 1 3040 3485 46107202 46107648 0.000000e+00 785.0
5 TraesCS6B01G068300 chr6B 96.380 442 15 1 3045 3485 29373601 29374042 0.000000e+00 726.0
6 TraesCS6B01G068300 chr6B 95.973 447 15 3 3040 3485 29386260 29386704 0.000000e+00 723.0
7 TraesCS6B01G068300 chr6B 90.213 470 45 1 2159 2628 46081997 46082465 2.300000e-171 612.0
8 TraesCS6B01G068300 chr6B 91.063 414 37 0 1034 1447 46026756 46027169 8.450000e-156 560.0
9 TraesCS6B01G068300 chr6B 89.713 418 36 4 2631 3044 46082431 46082845 8.570000e-146 527.0
10 TraesCS6B01G068300 chr6B 85.294 204 17 5 1976 2166 46074126 46074329 7.630000e-47 198.0
11 TraesCS6B01G068300 chr6B 85.507 138 12 4 719 851 45983212 45983346 1.690000e-28 137.0
12 TraesCS6B01G068300 chr6B 100.000 37 0 0 2629 2665 46094439 46094475 6.240000e-08 69.4
13 TraesCS6B01G068300 chr6B 100.000 37 0 0 2592 2628 46094476 46094512 6.240000e-08 69.4
14 TraesCS6B01G068300 chr6B 100.000 29 0 0 697 725 182740313 182740285 2.000000e-03 54.7
15 TraesCS6B01G068300 chr6B 96.875 32 0 1 1171 1201 46083002 46083033 6.000000e-03 52.8
16 TraesCS6B01G068300 chr6A 93.490 1782 101 7 863 2630 26717820 26719600 0.000000e+00 2634.0
17 TraesCS6B01G068300 chr6A 89.732 1568 143 9 964 2522 26734196 26735754 0.000000e+00 1988.0
18 TraesCS6B01G068300 chr6A 85.129 464 49 10 223 682 26716396 26716843 1.140000e-124 457.0
19 TraesCS6B01G068300 chr6A 89.492 295 26 5 2742 3032 26720027 26720320 5.500000e-98 368.0
20 TraesCS6B01G068300 chr6A 88.889 144 9 1 730 866 26717575 26717718 1.660000e-38 171.0
21 TraesCS6B01G068300 chrUn 87.377 1822 175 27 719 2522 95385060 95386844 0.000000e+00 2039.0
22 TraesCS6B01G068300 chrUn 95.526 447 19 1 3040 3485 43217543 43217989 0.000000e+00 713.0
23 TraesCS6B01G068300 chrUn 76.271 177 39 3 2669 2843 311160952 311160777 1.330000e-14 91.6
24 TraesCS6B01G068300 chr3B 96.833 442 13 1 3045 3485 162629511 162629952 0.000000e+00 737.0
25 TraesCS6B01G068300 chr3B 78.750 160 29 5 2669 2825 675255878 675255721 6.150000e-18 102.0
26 TraesCS6B01G068300 chr7B 95.526 447 19 1 3040 3485 592492980 592493426 0.000000e+00 713.0
27 TraesCS6B01G068300 chr7B 95.526 447 19 1 3040 3485 679782150 679781704 0.000000e+00 713.0
28 TraesCS6B01G068300 chr7B 86.611 239 29 2 449 684 414077419 414077181 9.590000e-66 261.0
29 TraesCS6B01G068300 chr7B 86.611 239 29 2 449 684 638739584 638739346 9.590000e-66 261.0
30 TraesCS6B01G068300 chr7B 87.330 221 28 0 3 223 35122615 35122395 1.610000e-63 254.0
31 TraesCS6B01G068300 chr7B 76.271 177 39 3 2669 2843 695825275 695825100 1.330000e-14 91.6
32 TraesCS6B01G068300 chr4B 95.909 440 17 1 3043 3481 477184452 477184013 0.000000e+00 712.0
33 TraesCS6B01G068300 chr4B 95.711 443 18 1 3044 3485 477197002 477196560 0.000000e+00 712.0
34 TraesCS6B01G068300 chr4B 77.273 176 38 2 2669 2843 637631593 637631767 6.150000e-18 102.0
35 TraesCS6B01G068300 chr4A 89.333 225 24 0 1 225 606801088 606800864 2.050000e-72 283.0
36 TraesCS6B01G068300 chr4A 89.862 217 21 1 4 220 715253547 715253762 9.530000e-71 278.0
37 TraesCS6B01G068300 chr4A 88.000 225 24 1 1 225 606714579 606714358 2.670000e-66 263.0
38 TraesCS6B01G068300 chr1A 86.192 239 29 4 449 684 64940196 64940433 4.460000e-64 255.0
39 TraesCS6B01G068300 chr7D 85.656 244 32 2 445 685 176959065 176959308 1.610000e-63 254.0
40 TraesCS6B01G068300 chr7D 77.640 161 29 7 2669 2825 101390752 101390909 1.330000e-14 91.6
41 TraesCS6B01G068300 chr5D 85.892 241 31 2 447 684 344791068 344791308 1.610000e-63 254.0
42 TraesCS6B01G068300 chr3D 85.892 241 31 2 447 684 356407166 356407406 1.610000e-63 254.0
43 TraesCS6B01G068300 chr3D 85.714 238 33 1 448 684 280046392 280046629 2.080000e-62 250.0
44 TraesCS6B01G068300 chr3D 77.586 174 36 3 2672 2843 524863396 524863224 6.150000e-18 102.0
45 TraesCS6B01G068300 chr2D 85.892 241 31 2 447 684 525078062 525077822 1.610000e-63 254.0
46 TraesCS6B01G068300 chr2D 84.889 225 32 2 1 224 649069943 649069720 3.500000e-55 226.0
47 TraesCS6B01G068300 chr2D 78.212 179 32 6 2669 2843 576451393 576451218 1.320000e-19 108.0
48 TraesCS6B01G068300 chr2B 85.892 241 31 2 447 684 557731668 557731908 1.610000e-63 254.0
49 TraesCS6B01G068300 chr2B 84.906 212 31 1 12 223 23856517 23856307 2.720000e-51 213.0
50 TraesCS6B01G068300 chr2B 78.599 257 52 2 431 684 13483749 13484005 2.150000e-37 167.0
51 TraesCS6B01G068300 chr3A 87.330 221 27 1 3 223 446567957 446568176 5.770000e-63 252.0
52 TraesCS6B01G068300 chr3A 85.849 212 28 2 12 223 444719845 444719636 1.260000e-54 224.0
53 TraesCS6B01G068300 chr3A 100.000 28 0 0 698 725 383714564 383714537 6.000000e-03 52.8
54 TraesCS6B01G068300 chr6D 86.547 223 29 1 1 223 122984464 122984243 9.660000e-61 244.0
55 TraesCS6B01G068300 chr7A 87.671 73 9 0 2972 3044 580235104 580235032 6.200000e-13 86.1
56 TraesCS6B01G068300 chr7A 100.000 29 0 0 702 730 131778051 131778023 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G068300 chr6B 46091848 46095332 3484 False 2191.600000 6436 100.0000 1 3485 3 chr6B.!!$F9 3484
1 TraesCS6B01G068300 chr6B 46389932 46391720 1788 False 1969.000000 1969 86.6630 721 2522 1 chr6B.!!$F5 1801
2 TraesCS6B01G068300 chr6B 46072333 46074329 1996 False 1326.500000 2455 89.8885 1034 2628 2 chr6B.!!$F7 1594
3 TraesCS6B01G068300 chr6B 45983212 45984969 1757 False 1048.500000 1960 87.2430 719 2519 2 chr6B.!!$F6 1800
4 TraesCS6B01G068300 chr6B 46081997 46083033 1036 False 397.266667 612 92.2670 1171 3044 3 chr6B.!!$F8 1873
5 TraesCS6B01G068300 chr6A 26734196 26735754 1558 False 1988.000000 1988 89.7320 964 2522 1 chr6A.!!$F1 1558
6 TraesCS6B01G068300 chr6A 26716396 26720320 3924 False 907.500000 2634 89.2500 223 3032 4 chr6A.!!$F2 2809
7 TraesCS6B01G068300 chrUn 95385060 95386844 1784 False 2039.000000 2039 87.3770 719 2522 1 chrUn.!!$F2 1803

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
429 431 0.035458 GTTCCCGGGATGCTATCTGG 59.965 60.0 27.48 0.00 0.0 3.86 F
430 432 0.105194 TTCCCGGGATGCTATCTGGA 60.105 55.0 27.48 0.98 0.0 3.86 F
843 1541 0.244450 TTGTCCGGCCGTAGTACAAG 59.756 55.0 26.12 5.84 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2372 3230 1.391157 GCCTCCGTCTCTGAGCTCAT 61.391 60.0 18.63 0.0 0.0 2.90 R
2417 3275 6.169557 TCTTGGCTAGTGTAAGAGTTGAAA 57.830 37.5 0.00 0.0 0.0 2.69 R
2579 3437 0.385390 CCATTGCCCGCTTAACCATC 59.615 55.0 0.00 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.767255 GGAGCCTGTCGTGCCTGG 62.767 72.222 0.00 0.00 0.00 4.45
23 24 4.641645 CCTGTCGTGCCTGGCCAA 62.642 66.667 17.53 0.00 0.00 4.52
24 25 2.594303 CTGTCGTGCCTGGCCAAA 60.594 61.111 17.53 0.00 0.00 3.28
25 26 2.904866 TGTCGTGCCTGGCCAAAC 60.905 61.111 17.53 11.49 0.00 2.93
26 27 4.025401 GTCGTGCCTGGCCAAACG 62.025 66.667 22.76 22.76 37.38 3.60
29 30 3.365265 GTGCCTGGCCAAACGGAG 61.365 66.667 17.53 0.00 0.00 4.63
45 46 2.125106 AGCCGTCGCTCCAAATCC 60.125 61.111 0.00 0.00 43.95 3.01
46 47 3.564027 GCCGTCGCTCCAAATCCG 61.564 66.667 0.00 0.00 0.00 4.18
47 48 2.890474 CCGTCGCTCCAAATCCGG 60.890 66.667 0.00 0.00 0.00 5.14
48 49 2.125673 CGTCGCTCCAAATCCGGT 60.126 61.111 0.00 0.00 0.00 5.28
49 50 1.140161 CGTCGCTCCAAATCCGGTA 59.860 57.895 0.00 0.00 0.00 4.02
50 51 1.143969 CGTCGCTCCAAATCCGGTAC 61.144 60.000 0.00 0.00 0.00 3.34
51 52 0.175073 GTCGCTCCAAATCCGGTACT 59.825 55.000 0.00 0.00 0.00 2.73
52 53 0.458669 TCGCTCCAAATCCGGTACTC 59.541 55.000 0.00 0.00 0.00 2.59
53 54 0.460311 CGCTCCAAATCCGGTACTCT 59.540 55.000 0.00 0.00 0.00 3.24
54 55 1.536284 CGCTCCAAATCCGGTACTCTC 60.536 57.143 0.00 0.00 0.00 3.20
55 56 1.202545 GCTCCAAATCCGGTACTCTCC 60.203 57.143 0.00 0.00 0.00 3.71
56 57 2.108168 CTCCAAATCCGGTACTCTCCA 58.892 52.381 0.00 0.00 0.00 3.86
57 58 1.829222 TCCAAATCCGGTACTCTCCAC 59.171 52.381 0.00 0.00 0.00 4.02
58 59 1.470979 CCAAATCCGGTACTCTCCACG 60.471 57.143 0.00 0.00 0.00 4.94
59 60 0.175073 AAATCCGGTACTCTCCACGC 59.825 55.000 0.00 0.00 0.00 5.34
60 61 0.968901 AATCCGGTACTCTCCACGCA 60.969 55.000 0.00 0.00 0.00 5.24
61 62 1.384989 ATCCGGTACTCTCCACGCAG 61.385 60.000 0.00 0.00 0.00 5.18
62 63 2.044555 CCGGTACTCTCCACGCAGA 61.045 63.158 0.00 0.00 0.00 4.26
63 64 1.429825 CGGTACTCTCCACGCAGAG 59.570 63.158 5.34 5.34 44.96 3.35
64 65 1.810532 GGTACTCTCCACGCAGAGG 59.189 63.158 10.48 0.00 43.89 3.69
65 66 1.139947 GTACTCTCCACGCAGAGGC 59.860 63.158 10.48 1.40 43.89 4.70
66 67 1.304134 TACTCTCCACGCAGAGGCA 60.304 57.895 10.48 0.00 43.89 4.75
67 68 1.315981 TACTCTCCACGCAGAGGCAG 61.316 60.000 10.48 1.80 43.89 4.85
68 69 3.368190 CTCTCCACGCAGAGGCAGG 62.368 68.421 2.74 0.00 38.46 4.85
69 70 4.463879 CTCCACGCAGAGGCAGGG 62.464 72.222 0.00 0.00 38.46 4.45
97 98 4.483243 CCCGGCGCCACCATACTT 62.483 66.667 28.98 0.00 39.03 2.24
98 99 3.202001 CCGGCGCCACCATACTTG 61.202 66.667 28.98 6.19 39.03 3.16
107 108 2.588877 CCATACTTGGCGCCTCGG 60.589 66.667 29.70 19.05 35.85 4.63
108 109 2.588877 CATACTTGGCGCCTCGGG 60.589 66.667 29.70 16.51 0.00 5.14
109 110 4.547367 ATACTTGGCGCCTCGGGC 62.547 66.667 29.70 0.00 46.75 6.13
151 152 4.227134 CGGCGAGGAGGTGGGATG 62.227 72.222 0.00 0.00 0.00 3.51
152 153 2.764128 GGCGAGGAGGTGGGATGA 60.764 66.667 0.00 0.00 0.00 2.92
153 154 2.801631 GGCGAGGAGGTGGGATGAG 61.802 68.421 0.00 0.00 0.00 2.90
154 155 2.801631 GCGAGGAGGTGGGATGAGG 61.802 68.421 0.00 0.00 0.00 3.86
155 156 1.381872 CGAGGAGGTGGGATGAGGT 60.382 63.158 0.00 0.00 0.00 3.85
156 157 1.680522 CGAGGAGGTGGGATGAGGTG 61.681 65.000 0.00 0.00 0.00 4.00
157 158 1.307343 AGGAGGTGGGATGAGGTGG 60.307 63.158 0.00 0.00 0.00 4.61
158 159 2.378634 GGAGGTGGGATGAGGTGGG 61.379 68.421 0.00 0.00 0.00 4.61
159 160 2.286425 AGGTGGGATGAGGTGGGG 60.286 66.667 0.00 0.00 0.00 4.96
160 161 2.286121 GGTGGGATGAGGTGGGGA 60.286 66.667 0.00 0.00 0.00 4.81
161 162 2.378634 GGTGGGATGAGGTGGGGAG 61.379 68.421 0.00 0.00 0.00 4.30
162 163 1.306997 GTGGGATGAGGTGGGGAGA 60.307 63.158 0.00 0.00 0.00 3.71
163 164 1.003442 TGGGATGAGGTGGGGAGAG 59.997 63.158 0.00 0.00 0.00 3.20
164 165 1.768077 GGGATGAGGTGGGGAGAGG 60.768 68.421 0.00 0.00 0.00 3.69
165 166 1.768077 GGATGAGGTGGGGAGAGGG 60.768 68.421 0.00 0.00 0.00 4.30
166 167 2.367512 ATGAGGTGGGGAGAGGGC 60.368 66.667 0.00 0.00 0.00 5.19
167 168 4.741239 TGAGGTGGGGAGAGGGCC 62.741 72.222 0.00 0.00 0.00 5.80
259 260 1.593006 CTCGACATACACCGAATTGCC 59.407 52.381 0.00 0.00 34.17 4.52
264 265 3.161866 ACATACACCGAATTGCCCTTTT 58.838 40.909 0.00 0.00 0.00 2.27
269 270 2.163613 CACCGAATTGCCCTTTTAGGAC 59.836 50.000 0.00 0.00 37.67 3.85
292 293 3.012518 AGGCAATATCACACAGCTTCAC 58.987 45.455 0.00 0.00 0.00 3.18
308 309 3.684788 GCTTCACGTGATTCAACACCTAT 59.315 43.478 20.80 0.00 37.48 2.57
320 321 2.444140 ACCTATCTCCCGGCGCTT 60.444 61.111 7.64 0.00 0.00 4.68
344 345 2.315925 TGGCAATCTTCCACTCGATC 57.684 50.000 0.00 0.00 0.00 3.69
346 347 1.202417 GGCAATCTTCCACTCGATCGA 60.202 52.381 18.32 18.32 0.00 3.59
347 348 2.546795 GGCAATCTTCCACTCGATCGAT 60.547 50.000 19.78 0.00 0.00 3.59
348 349 2.474359 GCAATCTTCCACTCGATCGATG 59.526 50.000 19.78 17.43 0.00 3.84
349 350 3.055591 CAATCTTCCACTCGATCGATGG 58.944 50.000 27.09 27.09 34.58 3.51
350 351 0.385751 TCTTCCACTCGATCGATGGC 59.614 55.000 27.69 0.00 33.20 4.40
358 359 4.688966 GATCGATGGCGGCCCTCC 62.689 72.222 17.97 4.42 38.28 4.30
390 391 4.749245 TTTCTTTTTCTCCATCTCACGC 57.251 40.909 0.00 0.00 0.00 5.34
403 405 1.048494 CTCACGCGCGAGATTCTATG 58.952 55.000 39.36 21.55 34.79 2.23
404 406 0.317854 TCACGCGCGAGATTCTATGG 60.318 55.000 39.36 11.52 0.00 2.74
409 411 2.604855 CGCGCGAGATTCTATGGTAGTT 60.605 50.000 28.94 0.00 0.00 2.24
415 417 5.290386 CGAGATTCTATGGTAGTTGTTCCC 58.710 45.833 0.00 0.00 0.00 3.97
417 419 3.899052 TTCTATGGTAGTTGTTCCCGG 57.101 47.619 0.00 0.00 0.00 5.73
424 426 1.483415 GTAGTTGTTCCCGGGATGCTA 59.517 52.381 27.48 19.79 0.00 3.49
429 431 0.035458 GTTCCCGGGATGCTATCTGG 59.965 60.000 27.48 0.00 0.00 3.86
430 432 0.105194 TTCCCGGGATGCTATCTGGA 60.105 55.000 27.48 0.98 0.00 3.86
431 433 0.832135 TCCCGGGATGCTATCTGGAC 60.832 60.000 22.63 0.00 0.00 4.02
432 434 0.833834 CCCGGGATGCTATCTGGACT 60.834 60.000 18.48 0.00 0.00 3.85
433 435 0.605589 CCGGGATGCTATCTGGACTC 59.394 60.000 0.00 0.00 0.00 3.36
434 436 1.626686 CGGGATGCTATCTGGACTCT 58.373 55.000 0.00 0.00 0.00 3.24
435 437 2.555448 CCGGGATGCTATCTGGACTCTA 60.555 54.545 0.00 0.00 0.00 2.43
453 455 7.992033 TGGACTCTAGATAAACCTGACTACTAC 59.008 40.741 0.00 0.00 0.00 2.73
458 460 8.554870 TCTAGATAAACCTGACTACTACCTTCA 58.445 37.037 0.00 0.00 0.00 3.02
460 462 8.240267 AGATAAACCTGACTACTACCTTCATC 57.760 38.462 0.00 0.00 0.00 2.92
464 466 4.017407 ACCTGACTACTACCTTCATCCTGA 60.017 45.833 0.00 0.00 0.00 3.86
472 474 8.432805 ACTACTACCTTCATCCTGATTTATTGG 58.567 37.037 0.00 0.00 0.00 3.16
475 477 5.449553 ACCTTCATCCTGATTTATTGGTCC 58.550 41.667 0.00 0.00 0.00 4.46
476 478 5.044179 ACCTTCATCCTGATTTATTGGTCCA 60.044 40.000 0.00 0.00 0.00 4.02
477 479 6.073314 CCTTCATCCTGATTTATTGGTCCAT 58.927 40.000 0.00 0.00 0.00 3.41
614 618 5.908916 TTGTGACATGCATGAACATTTTG 57.091 34.783 32.75 5.04 31.64 2.44
620 624 6.862608 TGACATGCATGAACATTTTGTTAGTC 59.137 34.615 32.75 14.38 41.28 2.59
621 625 6.158598 ACATGCATGAACATTTTGTTAGTCC 58.841 36.000 32.75 0.00 41.28 3.85
627 631 8.558700 GCATGAACATTTTGTTAGTCCAATTTT 58.441 29.630 0.00 0.00 41.28 1.82
656 660 6.144402 GCAAAATTTGGCATAGAATACGATGG 59.856 38.462 12.87 0.00 31.47 3.51
674 679 3.662759 TGGGACCAATAAATCAGGACC 57.337 47.619 0.00 0.00 36.67 4.46
682 687 4.101119 CCAATAAATCAGGACCGAGGTAGT 59.899 45.833 0.00 0.00 0.00 2.73
683 688 5.303589 CCAATAAATCAGGACCGAGGTAGTA 59.696 44.000 0.00 0.00 0.00 1.82
685 690 1.984066 ATCAGGACCGAGGTAGTAGC 58.016 55.000 0.00 0.00 0.00 3.58
687 692 1.005097 TCAGGACCGAGGTAGTAGCAA 59.995 52.381 1.58 0.00 0.00 3.91
688 693 1.822990 CAGGACCGAGGTAGTAGCAAA 59.177 52.381 1.58 0.00 0.00 3.68
689 694 1.823610 AGGACCGAGGTAGTAGCAAAC 59.176 52.381 1.58 0.00 0.00 2.93
690 695 1.823610 GGACCGAGGTAGTAGCAAACT 59.176 52.381 1.58 0.00 42.62 2.66
708 713 8.205131 AGCAAACTACGGTATACTTATTTTGG 57.795 34.615 18.52 4.70 0.00 3.28
709 714 8.042515 AGCAAACTACGGTATACTTATTTTGGA 58.957 33.333 18.52 0.00 0.00 3.53
710 715 8.667463 GCAAACTACGGTATACTTATTTTGGAA 58.333 33.333 18.52 0.00 0.00 3.53
711 716 9.977762 CAAACTACGGTATACTTATTTTGGAAC 57.022 33.333 2.25 0.00 0.00 3.62
712 717 7.992180 ACTACGGTATACTTATTTTGGAACG 57.008 36.000 2.25 0.00 0.00 3.95
713 718 6.980397 ACTACGGTATACTTATTTTGGAACGG 59.020 38.462 2.25 0.00 0.00 4.44
714 719 5.976458 ACGGTATACTTATTTTGGAACGGA 58.024 37.500 2.25 0.00 0.00 4.69
715 720 6.044682 ACGGTATACTTATTTTGGAACGGAG 58.955 40.000 2.25 0.00 0.00 4.63
716 721 5.464389 CGGTATACTTATTTTGGAACGGAGG 59.536 44.000 2.25 0.00 0.00 4.30
717 722 5.761726 GGTATACTTATTTTGGAACGGAGGG 59.238 44.000 2.25 0.00 0.00 4.30
724 729 1.719529 TTGGAACGGAGGGAGTAACA 58.280 50.000 0.00 0.00 0.00 2.41
763 1452 3.614870 GCCAAATTTGACTTGTAGCCCTG 60.615 47.826 19.86 0.00 0.00 4.45
807 1503 4.211125 TGTTAACCATGACACCACACAAT 58.789 39.130 2.48 0.00 0.00 2.71
843 1541 0.244450 TTGTCCGGCCGTAGTACAAG 59.756 55.000 26.12 5.84 0.00 3.16
925 1735 1.533756 CGGAAAGCAAACACACCACTG 60.534 52.381 0.00 0.00 0.00 3.66
961 1780 1.477558 CCTCTCACCAAAACACCAGCT 60.478 52.381 0.00 0.00 0.00 4.24
970 1789 3.141398 CAAAACACCAGCTAGCTCTTCA 58.859 45.455 16.15 0.00 0.00 3.02
1023 1842 0.669625 GCGGTGAGTCAGGTAACCAC 60.670 60.000 0.00 0.00 32.69 4.16
1028 1847 3.433173 GGTGAGTCAGGTAACCACAAACT 60.433 47.826 0.00 0.00 32.69 2.66
1122 1941 4.421479 CTGGCTCGCCGTCTCGTT 62.421 66.667 3.14 0.00 39.42 3.85
1296 2115 3.418913 CCCGAACGCGTCATGCAA 61.419 61.111 14.44 0.00 46.97 4.08
2372 3230 0.888619 ACGATGAGGAAGCGTCTTGA 59.111 50.000 0.00 0.00 31.98 3.02
2386 3244 2.790812 CGTCTTGATGAGCTCAGAGACG 60.791 54.545 37.36 37.36 46.38 4.18
2390 3248 0.667993 GATGAGCTCAGAGACGGAGG 59.332 60.000 22.96 0.00 32.96 4.30
2417 3275 1.140852 TGCGCTAGCTATGGATGGTTT 59.859 47.619 13.93 0.00 45.42 3.27
2483 3341 6.590292 TCTTCTACTTCTAATGGCGAAAGTTG 59.410 38.462 0.00 0.00 0.00 3.16
2499 3357 7.337718 GCGAAAGTTGAAGGAAAAGAAAAATC 58.662 34.615 0.00 0.00 0.00 2.17
2540 3398 5.276678 CCACCGCACGTCATTATTTACTTAG 60.277 44.000 0.00 0.00 0.00 2.18
2573 3431 4.156556 TCTCCATCTTGTAAAGCAACATGC 59.843 41.667 0.00 0.00 45.70 4.06
2589 3447 1.102978 ATGCGGTTGGATGGTTAAGC 58.897 50.000 0.00 0.00 0.00 3.09
2592 3450 1.373590 CGGTTGGATGGTTAAGCGGG 61.374 60.000 0.00 0.00 42.20 6.13
2605 3463 0.179018 AAGCGGGCAATGGTATCTCC 60.179 55.000 0.00 0.00 0.00 3.71
2618 3476 5.276694 TGGTATCTCCAGCCTATGATAGT 57.723 43.478 0.00 0.00 41.93 2.12
2619 3477 5.655394 TGGTATCTCCAGCCTATGATAGTT 58.345 41.667 0.00 0.00 41.93 2.24
2620 3478 5.717178 TGGTATCTCCAGCCTATGATAGTTC 59.283 44.000 0.00 0.00 41.93 3.01
2621 3479 5.717178 GGTATCTCCAGCCTATGATAGTTCA 59.283 44.000 0.00 0.00 34.45 3.18
2622 3480 6.211584 GGTATCTCCAGCCTATGATAGTTCAA 59.788 42.308 0.00 0.00 33.95 2.69
2623 3481 5.798125 TCTCCAGCCTATGATAGTTCAAG 57.202 43.478 0.00 0.00 34.96 3.02
2624 3482 5.211973 TCTCCAGCCTATGATAGTTCAAGT 58.788 41.667 0.00 0.00 34.96 3.16
2625 3483 5.303078 TCTCCAGCCTATGATAGTTCAAGTC 59.697 44.000 0.00 0.00 34.96 3.01
2626 3484 4.345257 TCCAGCCTATGATAGTTCAAGTCC 59.655 45.833 0.00 0.00 34.96 3.85
2627 3485 4.346418 CCAGCCTATGATAGTTCAAGTCCT 59.654 45.833 0.00 0.00 34.96 3.85
2628 3486 5.295950 CAGCCTATGATAGTTCAAGTCCTG 58.704 45.833 0.00 0.00 34.96 3.86
2629 3487 4.346418 AGCCTATGATAGTTCAAGTCCTGG 59.654 45.833 0.00 0.00 34.96 4.45
2630 3488 4.636249 CCTATGATAGTTCAAGTCCTGGC 58.364 47.826 0.00 0.00 34.96 4.85
2631 3489 4.101585 CCTATGATAGTTCAAGTCCTGGCA 59.898 45.833 0.00 0.00 34.96 4.92
2632 3490 4.574674 ATGATAGTTCAAGTCCTGGCAA 57.425 40.909 0.00 0.00 34.96 4.52
2633 3491 4.574674 TGATAGTTCAAGTCCTGGCAAT 57.425 40.909 0.00 0.00 0.00 3.56
2635 3493 1.915141 AGTTCAAGTCCTGGCAATGG 58.085 50.000 0.00 0.00 0.00 3.16
2641 3499 3.118261 TCAAGTCCTGGCAATGGTATCTC 60.118 47.826 0.00 0.00 0.00 2.75
2677 3603 1.895798 CAAGTCCTAGACTGGTGCTCA 59.104 52.381 0.00 0.00 42.59 4.26
2753 4031 7.661847 AGGAGACTTTTTCATCGACTACAAAAT 59.338 33.333 0.00 0.00 37.44 1.82
2784 4063 4.418392 GCGACTTCGTCAACCTTAAGATA 58.582 43.478 3.36 0.00 42.22 1.98
2940 4224 4.254492 CCTCTTGTTTTACCTCTACCTGC 58.746 47.826 0.00 0.00 0.00 4.85
2945 4229 3.197116 TGTTTTACCTCTACCTGCCTAGC 59.803 47.826 0.00 0.00 0.00 3.42
2978 4263 4.870363 AGTGATGTTTTGGGTCGAAATTG 58.130 39.130 0.00 0.00 0.00 2.32
3033 4318 0.394216 TCCCCCACTCATTTGCATCG 60.394 55.000 0.00 0.00 0.00 3.84
3052 4337 1.192428 GGAATCCCTACTGTCGTGGT 58.808 55.000 0.00 0.00 0.00 4.16
3055 4340 2.233305 ATCCCTACTGTCGTGGTTCT 57.767 50.000 0.00 0.00 0.00 3.01
3056 4341 2.885135 TCCCTACTGTCGTGGTTCTA 57.115 50.000 0.00 0.00 0.00 2.10
3058 4343 3.087031 TCCCTACTGTCGTGGTTCTAAG 58.913 50.000 0.00 0.00 0.00 2.18
3060 4345 3.119566 CCCTACTGTCGTGGTTCTAAGTC 60.120 52.174 0.00 0.00 0.00 3.01
3062 4347 3.644884 ACTGTCGTGGTTCTAAGTCTG 57.355 47.619 0.00 0.00 0.00 3.51
3063 4348 3.220110 ACTGTCGTGGTTCTAAGTCTGA 58.780 45.455 0.00 0.00 0.00 3.27
3064 4349 3.004524 ACTGTCGTGGTTCTAAGTCTGAC 59.995 47.826 0.00 0.00 0.00 3.51
3065 4350 2.953648 TGTCGTGGTTCTAAGTCTGACA 59.046 45.455 10.88 0.00 33.14 3.58
3067 4352 3.004524 GTCGTGGTTCTAAGTCTGACAGT 59.995 47.826 10.88 0.00 0.00 3.55
3069 4354 4.454847 TCGTGGTTCTAAGTCTGACAGTAG 59.545 45.833 10.88 10.72 0.00 2.57
3070 4355 4.454847 CGTGGTTCTAAGTCTGACAGTAGA 59.545 45.833 10.88 12.74 0.00 2.59
3071 4356 5.391097 CGTGGTTCTAAGTCTGACAGTAGAG 60.391 48.000 10.88 0.00 0.00 2.43
3072 4357 5.474189 GTGGTTCTAAGTCTGACAGTAGAGT 59.526 44.000 10.88 0.00 31.79 3.24
3074 4359 5.106078 GGTTCTAAGTCTGACAGTAGAGTGG 60.106 48.000 10.88 0.00 30.94 4.00
3076 4361 2.223803 AGTCTGACAGTAGAGTGGGG 57.776 55.000 10.88 0.00 0.00 4.96
3077 4362 1.187087 GTCTGACAGTAGAGTGGGGG 58.813 60.000 2.24 0.00 0.00 5.40
3094 4379 1.694693 GGGGGTAGGTATGAAGAGGCA 60.695 57.143 0.00 0.00 0.00 4.75
3095 4380 2.124411 GGGGTAGGTATGAAGAGGCAA 58.876 52.381 0.00 0.00 0.00 4.52
3096 4381 2.104963 GGGGTAGGTATGAAGAGGCAAG 59.895 54.545 0.00 0.00 0.00 4.01
3099 4384 3.181464 GGTAGGTATGAAGAGGCAAGGTC 60.181 52.174 0.00 0.00 0.00 3.85
3100 4385 1.840635 AGGTATGAAGAGGCAAGGTCC 59.159 52.381 0.00 0.00 0.00 4.46
3102 4387 3.039011 GGTATGAAGAGGCAAGGTCCTA 58.961 50.000 0.00 0.00 36.38 2.94
3140 4425 6.044046 TGTAAACACAAGTGATGTACGAGTT 58.956 36.000 7.28 0.00 41.46 3.01
3141 4426 5.652744 AAACACAAGTGATGTACGAGTTC 57.347 39.130 7.28 0.00 41.46 3.01
3143 4428 4.299155 ACACAAGTGATGTACGAGTTCAG 58.701 43.478 7.28 0.00 41.46 3.02
3144 4429 3.675225 CACAAGTGATGTACGAGTTCAGG 59.325 47.826 0.00 0.00 41.46 3.86
3146 4431 1.204941 AGTGATGTACGAGTTCAGGCC 59.795 52.381 0.00 0.00 0.00 5.19
3147 4432 0.535335 TGATGTACGAGTTCAGGCCC 59.465 55.000 0.00 0.00 0.00 5.80
3148 4433 0.824759 GATGTACGAGTTCAGGCCCT 59.175 55.000 0.00 0.00 0.00 5.19
3149 4434 1.207329 GATGTACGAGTTCAGGCCCTT 59.793 52.381 0.00 0.00 0.00 3.95
3150 4435 0.606604 TGTACGAGTTCAGGCCCTTC 59.393 55.000 0.00 0.00 0.00 3.46
3151 4436 0.896226 GTACGAGTTCAGGCCCTTCT 59.104 55.000 0.00 0.00 0.00 2.85
3152 4437 1.135053 GTACGAGTTCAGGCCCTTCTC 60.135 57.143 0.00 1.73 0.00 2.87
3153 4438 0.832135 ACGAGTTCAGGCCCTTCTCA 60.832 55.000 0.00 0.00 0.00 3.27
3154 4439 0.108424 CGAGTTCAGGCCCTTCTCAG 60.108 60.000 0.00 0.00 0.00 3.35
3156 4441 1.206849 GAGTTCAGGCCCTTCTCAGAG 59.793 57.143 0.00 0.00 0.00 3.35
3157 4442 0.251634 GTTCAGGCCCTTCTCAGAGG 59.748 60.000 0.00 0.00 36.52 3.69
3158 4443 0.117140 TTCAGGCCCTTCTCAGAGGA 59.883 55.000 0.00 0.00 39.25 3.71
3159 4444 0.117140 TCAGGCCCTTCTCAGAGGAA 59.883 55.000 0.00 0.00 39.25 3.36
3160 4445 0.540923 CAGGCCCTTCTCAGAGGAAG 59.459 60.000 0.00 0.60 39.25 3.46
3161 4446 0.118144 AGGCCCTTCTCAGAGGAAGT 59.882 55.000 0.00 0.00 40.56 3.01
3163 4448 2.188817 GGCCCTTCTCAGAGGAAGTAA 58.811 52.381 0.00 0.00 40.56 2.24
3164 4449 2.572104 GGCCCTTCTCAGAGGAAGTAAA 59.428 50.000 0.00 0.00 40.56 2.01
3165 4450 3.009143 GGCCCTTCTCAGAGGAAGTAAAA 59.991 47.826 0.00 0.00 40.56 1.52
3166 4451 4.257731 GCCCTTCTCAGAGGAAGTAAAAG 58.742 47.826 0.00 0.00 40.56 2.27
3169 4454 3.983044 TCTCAGAGGAAGTAAAAGCCC 57.017 47.619 0.00 0.00 0.00 5.19
3170 4455 3.521727 TCTCAGAGGAAGTAAAAGCCCT 58.478 45.455 0.00 0.00 0.00 5.19
3171 4456 4.684724 TCTCAGAGGAAGTAAAAGCCCTA 58.315 43.478 0.00 0.00 0.00 3.53
3173 4458 3.194968 TCAGAGGAAGTAAAAGCCCTACG 59.805 47.826 0.00 0.00 0.00 3.51
3174 4459 3.056035 CAGAGGAAGTAAAAGCCCTACGT 60.056 47.826 0.00 0.00 0.00 3.57
3176 4461 3.171528 AGGAAGTAAAAGCCCTACGTCT 58.828 45.455 0.00 0.00 31.08 4.18
3177 4462 3.195182 AGGAAGTAAAAGCCCTACGTCTC 59.805 47.826 0.00 0.00 31.08 3.36
3178 4463 2.935481 AGTAAAAGCCCTACGTCTCG 57.065 50.000 0.00 0.00 0.00 4.04
3179 4464 1.475682 AGTAAAAGCCCTACGTCTCGG 59.524 52.381 0.00 0.00 0.00 4.63
3181 4466 0.531200 AAAAGCCCTACGTCTCGGAG 59.469 55.000 0.00 0.00 37.59 4.63
3182 4467 1.946475 AAAGCCCTACGTCTCGGAGC 61.946 60.000 0.00 0.00 36.34 4.70
3183 4468 3.902086 GCCCTACGTCTCGGAGCC 61.902 72.222 0.00 0.00 36.34 4.70
3202 4487 3.148279 GGAGGCGGTCGAGTGGAT 61.148 66.667 0.00 0.00 0.00 3.41
3204 4489 1.389609 GGAGGCGGTCGAGTGGATTA 61.390 60.000 0.00 0.00 0.00 1.75
3205 4490 0.674534 GAGGCGGTCGAGTGGATTAT 59.325 55.000 0.00 0.00 0.00 1.28
3206 4491 1.884579 GAGGCGGTCGAGTGGATTATA 59.115 52.381 0.00 0.00 0.00 0.98
3207 4492 2.492484 GAGGCGGTCGAGTGGATTATAT 59.508 50.000 0.00 0.00 0.00 0.86
3208 4493 2.231478 AGGCGGTCGAGTGGATTATATG 59.769 50.000 0.00 0.00 0.00 1.78
3209 4494 2.230508 GGCGGTCGAGTGGATTATATGA 59.769 50.000 0.00 0.00 0.00 2.15
3211 4496 3.057456 GCGGTCGAGTGGATTATATGAGT 60.057 47.826 0.00 0.00 0.00 3.41
3213 4498 5.163642 GCGGTCGAGTGGATTATATGAGTAT 60.164 44.000 0.00 0.00 0.00 2.12
3214 4499 6.258899 CGGTCGAGTGGATTATATGAGTATG 58.741 44.000 0.00 0.00 0.00 2.39
3215 4500 6.565234 GGTCGAGTGGATTATATGAGTATGG 58.435 44.000 0.00 0.00 0.00 2.74
3216 4501 6.377429 GGTCGAGTGGATTATATGAGTATGGA 59.623 42.308 0.00 0.00 0.00 3.41
3218 4503 8.470805 GTCGAGTGGATTATATGAGTATGGATT 58.529 37.037 0.00 0.00 0.00 3.01
3219 4504 9.695155 TCGAGTGGATTATATGAGTATGGATTA 57.305 33.333 0.00 0.00 0.00 1.75
3220 4505 9.737427 CGAGTGGATTATATGAGTATGGATTAC 57.263 37.037 0.00 0.00 0.00 1.89
3224 4509 8.992349 TGGATTATATGAGTATGGATTACAGGG 58.008 37.037 0.00 0.00 32.87 4.45
3225 4510 8.432805 GGATTATATGAGTATGGATTACAGGGG 58.567 40.741 0.00 0.00 32.87 4.79
3226 4511 8.933522 ATTATATGAGTATGGATTACAGGGGT 57.066 34.615 0.00 0.00 32.87 4.95
3227 4512 4.982241 ATGAGTATGGATTACAGGGGTG 57.018 45.455 0.00 0.00 32.87 4.61
3228 4513 2.438021 TGAGTATGGATTACAGGGGTGC 59.562 50.000 0.00 0.00 32.87 5.01
3229 4514 1.774856 AGTATGGATTACAGGGGTGCC 59.225 52.381 0.00 0.00 32.87 5.01
3230 4515 1.493022 GTATGGATTACAGGGGTGCCA 59.507 52.381 0.00 0.00 0.00 4.92
3231 4516 1.006813 ATGGATTACAGGGGTGCCAA 58.993 50.000 0.00 0.00 31.08 4.52
3232 4517 0.039035 TGGATTACAGGGGTGCCAAC 59.961 55.000 0.00 0.00 0.00 3.77
3233 4518 0.683179 GGATTACAGGGGTGCCAACC 60.683 60.000 0.00 0.00 46.81 3.77
3241 4526 2.991540 GGTGCCAACCCTTCTGCC 60.992 66.667 0.00 0.00 41.04 4.85
3242 4527 2.116125 GTGCCAACCCTTCTGCCT 59.884 61.111 0.00 0.00 0.00 4.75
3243 4528 2.115910 TGCCAACCCTTCTGCCTG 59.884 61.111 0.00 0.00 0.00 4.85
3244 4529 2.116125 GCCAACCCTTCTGCCTGT 59.884 61.111 0.00 0.00 0.00 4.00
3245 4530 2.270986 GCCAACCCTTCTGCCTGTG 61.271 63.158 0.00 0.00 0.00 3.66
3246 4531 1.604593 CCAACCCTTCTGCCTGTGG 60.605 63.158 0.00 0.00 0.00 4.17
3247 4532 1.455849 CAACCCTTCTGCCTGTGGA 59.544 57.895 0.00 0.00 0.00 4.02
3248 4533 0.607489 CAACCCTTCTGCCTGTGGAG 60.607 60.000 0.00 0.00 0.00 3.86
3249 4534 1.783250 AACCCTTCTGCCTGTGGAGG 61.783 60.000 0.00 0.00 43.19 4.30
3250 4535 2.673523 CCTTCTGCCTGTGGAGGG 59.326 66.667 0.00 0.00 40.19 4.30
3251 4536 2.673523 CTTCTGCCTGTGGAGGGG 59.326 66.667 0.00 0.00 40.19 4.79
3252 4537 2.935481 TTCTGCCTGTGGAGGGGG 60.935 66.667 0.00 0.00 40.19 5.40
3253 4538 3.810687 TTCTGCCTGTGGAGGGGGT 62.811 63.158 0.00 0.00 40.19 4.95
3254 4539 4.039092 CTGCCTGTGGAGGGGGTG 62.039 72.222 0.00 0.00 40.19 4.61
3258 4543 3.260100 CTGTGGAGGGGGTGGCTT 61.260 66.667 0.00 0.00 0.00 4.35
3259 4544 1.923395 CTGTGGAGGGGGTGGCTTA 60.923 63.158 0.00 0.00 0.00 3.09
3260 4545 1.230149 TGTGGAGGGGGTGGCTTAT 60.230 57.895 0.00 0.00 0.00 1.73
3261 4546 0.045008 TGTGGAGGGGGTGGCTTATA 59.955 55.000 0.00 0.00 0.00 0.98
3262 4547 1.346046 TGTGGAGGGGGTGGCTTATAT 60.346 52.381 0.00 0.00 0.00 0.86
3263 4548 2.089868 TGTGGAGGGGGTGGCTTATATA 60.090 50.000 0.00 0.00 0.00 0.86
3264 4549 2.572104 GTGGAGGGGGTGGCTTATATAG 59.428 54.545 0.00 0.00 0.00 1.31
3265 4550 2.457126 TGGAGGGGGTGGCTTATATAGA 59.543 50.000 0.00 0.00 0.00 1.98
3266 4551 3.108376 GGAGGGGGTGGCTTATATAGAG 58.892 54.545 0.00 0.00 0.00 2.43
3267 4552 3.504343 GGAGGGGGTGGCTTATATAGAGT 60.504 52.174 0.00 0.00 0.00 3.24
3268 4553 4.264713 GGAGGGGGTGGCTTATATAGAGTA 60.265 50.000 0.00 0.00 0.00 2.59
3269 4554 4.685807 AGGGGGTGGCTTATATAGAGTAC 58.314 47.826 0.00 0.00 0.00 2.73
3270 4555 3.446516 GGGGGTGGCTTATATAGAGTACG 59.553 52.174 0.00 0.00 0.00 3.67
3271 4556 3.119209 GGGGTGGCTTATATAGAGTACGC 60.119 52.174 0.00 0.00 0.00 4.42
3272 4557 3.119209 GGGTGGCTTATATAGAGTACGCC 60.119 52.174 0.00 0.00 37.09 5.68
3273 4558 3.508793 GGTGGCTTATATAGAGTACGCCA 59.491 47.826 0.00 0.00 42.17 5.69
3274 4559 4.380655 GGTGGCTTATATAGAGTACGCCAG 60.381 50.000 5.69 0.00 44.14 4.85
3275 4560 3.762288 TGGCTTATATAGAGTACGCCAGG 59.238 47.826 0.00 0.00 40.32 4.45
3276 4561 4.015084 GGCTTATATAGAGTACGCCAGGA 58.985 47.826 0.00 0.00 36.70 3.86
3277 4562 4.142425 GGCTTATATAGAGTACGCCAGGAC 60.142 50.000 0.00 0.00 36.70 3.85
3278 4563 4.142425 GCTTATATAGAGTACGCCAGGACC 60.142 50.000 0.00 0.00 0.00 4.46
3279 4564 2.283145 TATAGAGTACGCCAGGACCC 57.717 55.000 0.00 0.00 0.00 4.46
3280 4565 0.469518 ATAGAGTACGCCAGGACCCC 60.470 60.000 0.00 0.00 0.00 4.95
3281 4566 1.578215 TAGAGTACGCCAGGACCCCT 61.578 60.000 0.00 0.00 0.00 4.79
3295 4580 4.028490 CCCTGCCAGCCCACGTAA 62.028 66.667 0.00 0.00 0.00 3.18
3296 4581 2.272146 CCTGCCAGCCCACGTAAT 59.728 61.111 0.00 0.00 0.00 1.89
3297 4582 2.114670 CCTGCCAGCCCACGTAATG 61.115 63.158 0.00 0.00 0.00 1.90
3298 4583 1.078497 CTGCCAGCCCACGTAATGA 60.078 57.895 0.00 0.00 0.00 2.57
3299 4584 0.676466 CTGCCAGCCCACGTAATGAA 60.676 55.000 0.00 0.00 0.00 2.57
3300 4585 0.676466 TGCCAGCCCACGTAATGAAG 60.676 55.000 0.00 0.00 0.00 3.02
3301 4586 1.376609 GCCAGCCCACGTAATGAAGG 61.377 60.000 0.00 0.00 0.00 3.46
3302 4587 0.748005 CCAGCCCACGTAATGAAGGG 60.748 60.000 2.03 2.03 44.37 3.95
3303 4588 0.035439 CAGCCCACGTAATGAAGGGT 60.035 55.000 8.09 0.00 43.42 4.34
3304 4589 0.696501 AGCCCACGTAATGAAGGGTT 59.303 50.000 8.09 0.00 43.42 4.11
3305 4590 1.074889 AGCCCACGTAATGAAGGGTTT 59.925 47.619 8.09 0.00 43.42 3.27
3306 4591 2.306512 AGCCCACGTAATGAAGGGTTTA 59.693 45.455 8.09 0.00 43.42 2.01
3307 4592 3.083293 GCCCACGTAATGAAGGGTTTAA 58.917 45.455 8.09 0.00 43.42 1.52
3308 4593 3.506844 GCCCACGTAATGAAGGGTTTAAA 59.493 43.478 8.09 0.00 43.42 1.52
3309 4594 4.380128 GCCCACGTAATGAAGGGTTTAAAG 60.380 45.833 8.09 0.00 43.42 1.85
3310 4595 4.763279 CCCACGTAATGAAGGGTTTAAAGT 59.237 41.667 0.00 0.00 36.52 2.66
3311 4596 5.939296 CCCACGTAATGAAGGGTTTAAAGTA 59.061 40.000 0.00 0.00 36.52 2.24
3312 4597 6.128200 CCCACGTAATGAAGGGTTTAAAGTAC 60.128 42.308 0.00 0.00 36.52 2.73
3313 4598 6.427547 CCACGTAATGAAGGGTTTAAAGTACA 59.572 38.462 0.00 0.00 0.00 2.90
3314 4599 7.120138 CCACGTAATGAAGGGTTTAAAGTACAT 59.880 37.037 0.00 0.00 0.00 2.29
3315 4600 8.508875 CACGTAATGAAGGGTTTAAAGTACATT 58.491 33.333 0.00 0.00 0.00 2.71
3316 4601 9.723601 ACGTAATGAAGGGTTTAAAGTACATTA 57.276 29.630 0.00 0.00 0.00 1.90
3322 4607 9.280174 TGAAGGGTTTAAAGTACATTAAGTCTG 57.720 33.333 3.74 0.00 0.00 3.51
3323 4608 8.631480 AAGGGTTTAAAGTACATTAAGTCTGG 57.369 34.615 3.74 0.00 0.00 3.86
3324 4609 7.173032 AGGGTTTAAAGTACATTAAGTCTGGG 58.827 38.462 3.74 0.00 0.00 4.45
3325 4610 6.376299 GGGTTTAAAGTACATTAAGTCTGGGG 59.624 42.308 3.74 0.00 0.00 4.96
3326 4611 6.127814 GGTTTAAAGTACATTAAGTCTGGGGC 60.128 42.308 3.74 0.00 0.00 5.80
3327 4612 2.981859 AGTACATTAAGTCTGGGGCG 57.018 50.000 0.00 0.00 0.00 6.13
3328 4613 2.185387 AGTACATTAAGTCTGGGGCGT 58.815 47.619 0.00 0.00 0.00 5.68
3329 4614 2.570302 AGTACATTAAGTCTGGGGCGTT 59.430 45.455 0.00 0.00 0.00 4.84
3330 4615 3.770933 AGTACATTAAGTCTGGGGCGTTA 59.229 43.478 0.00 0.00 0.00 3.18
3331 4616 2.981898 ACATTAAGTCTGGGGCGTTAC 58.018 47.619 0.00 0.00 0.00 2.50
3332 4617 2.570302 ACATTAAGTCTGGGGCGTTACT 59.430 45.455 0.00 0.00 0.00 2.24
3333 4618 2.754946 TTAAGTCTGGGGCGTTACTG 57.245 50.000 0.00 0.00 0.00 2.74
3334 4619 0.899720 TAAGTCTGGGGCGTTACTGG 59.100 55.000 0.00 0.00 0.00 4.00
3335 4620 1.125711 AAGTCTGGGGCGTTACTGGT 61.126 55.000 0.00 0.00 0.00 4.00
3336 4621 0.251922 AGTCTGGGGCGTTACTGGTA 60.252 55.000 0.00 0.00 0.00 3.25
3337 4622 0.609662 GTCTGGGGCGTTACTGGTAA 59.390 55.000 0.00 0.00 0.00 2.85
3338 4623 0.609662 TCTGGGGCGTTACTGGTAAC 59.390 55.000 12.13 12.13 41.37 2.50
3345 4630 2.845019 GTTACTGGTAACGCCCCAC 58.155 57.895 7.70 0.00 36.47 4.61
3346 4631 0.035176 GTTACTGGTAACGCCCCACA 59.965 55.000 7.70 0.00 36.47 4.17
3347 4632 0.985760 TTACTGGTAACGCCCCACAT 59.014 50.000 0.00 0.00 42.51 3.21
3348 4633 1.863325 TACTGGTAACGCCCCACATA 58.137 50.000 0.00 0.00 42.51 2.29
3349 4634 0.985760 ACTGGTAACGCCCCACATAA 59.014 50.000 0.00 0.00 42.51 1.90
3350 4635 1.351683 ACTGGTAACGCCCCACATAAA 59.648 47.619 0.00 0.00 42.51 1.40
3351 4636 2.014128 CTGGTAACGCCCCACATAAAG 58.986 52.381 0.00 0.00 42.51 1.85
3352 4637 1.351683 TGGTAACGCCCCACATAAAGT 59.648 47.619 0.00 0.00 42.51 2.66
3353 4638 2.876485 TGGTAACGCCCCACATAAAGTG 60.876 50.000 0.00 0.00 44.56 3.16
3354 4639 5.394387 TGGTAACGCCCCACATAAAGTGT 62.394 47.826 0.00 0.00 43.76 3.55
3376 4661 9.531158 AGTGTCTTAACTACCATAAAGTCTACT 57.469 33.333 0.00 0.00 0.00 2.57
3389 4674 9.245962 CCATAAAGTCTACTTAATTACAGACCG 57.754 37.037 13.59 0.00 38.53 4.79
3390 4675 9.798994 CATAAAGTCTACTTAATTACAGACCGT 57.201 33.333 13.59 7.70 38.53 4.83
3392 4677 8.530269 AAAGTCTACTTAATTACAGACCGTTG 57.470 34.615 13.59 0.00 38.53 4.10
3393 4678 6.098017 AGTCTACTTAATTACAGACCGTTGC 58.902 40.000 13.59 0.00 38.53 4.17
3394 4679 5.865552 GTCTACTTAATTACAGACCGTTGCA 59.134 40.000 8.78 0.00 32.93 4.08
3395 4680 6.034683 GTCTACTTAATTACAGACCGTTGCAG 59.965 42.308 8.78 0.00 32.93 4.41
3396 4681 4.638304 ACTTAATTACAGACCGTTGCAGT 58.362 39.130 0.00 0.00 0.00 4.40
3397 4682 5.786311 ACTTAATTACAGACCGTTGCAGTA 58.214 37.500 0.00 0.00 0.00 2.74
3398 4683 5.636543 ACTTAATTACAGACCGTTGCAGTAC 59.363 40.000 0.00 0.00 0.00 2.73
3399 4684 3.671008 ATTACAGACCGTTGCAGTACA 57.329 42.857 0.00 0.00 0.00 2.90
3400 4685 2.717580 TACAGACCGTTGCAGTACAG 57.282 50.000 0.00 0.00 0.00 2.74
3401 4686 1.037493 ACAGACCGTTGCAGTACAGA 58.963 50.000 0.00 0.00 0.00 3.41
3402 4687 1.000163 ACAGACCGTTGCAGTACAGAG 60.000 52.381 0.00 0.00 0.00 3.35
3403 4688 1.000163 CAGACCGTTGCAGTACAGAGT 60.000 52.381 0.00 0.00 0.00 3.24
3404 4689 1.000163 AGACCGTTGCAGTACAGAGTG 60.000 52.381 0.00 0.00 0.00 3.51
3412 4697 3.032017 GCAGTACAGAGTGCTTCTTGA 57.968 47.619 0.00 0.00 46.80 3.02
3413 4698 2.734079 GCAGTACAGAGTGCTTCTTGAC 59.266 50.000 0.00 0.00 46.80 3.18
3414 4699 3.321497 CAGTACAGAGTGCTTCTTGACC 58.679 50.000 0.00 0.00 32.41 4.02
3415 4700 3.006323 CAGTACAGAGTGCTTCTTGACCT 59.994 47.826 0.00 0.00 32.41 3.85
3416 4701 3.643792 AGTACAGAGTGCTTCTTGACCTT 59.356 43.478 0.00 0.00 32.41 3.50
3417 4702 3.118905 ACAGAGTGCTTCTTGACCTTC 57.881 47.619 0.00 0.00 32.41 3.46
3418 4703 2.703007 ACAGAGTGCTTCTTGACCTTCT 59.297 45.455 0.00 0.00 32.41 2.85
3419 4704 3.065655 CAGAGTGCTTCTTGACCTTCTG 58.934 50.000 0.00 0.00 32.41 3.02
3420 4705 2.038295 AGAGTGCTTCTTGACCTTCTGG 59.962 50.000 0.00 0.00 33.74 3.86
3421 4706 4.518583 AGAGTGCTTCTTGACCTTCTGGT 61.519 47.826 0.00 0.00 40.78 4.00
3422 4707 6.549763 AGAGTGCTTCTTGACCTTCTGGTG 62.550 50.000 0.00 0.00 38.94 4.17
3429 4714 4.621269 ACCTTCTGGTGGTCGAGT 57.379 55.556 0.00 0.00 46.51 4.18
3430 4715 2.050269 ACCTTCTGGTGGTCGAGTG 58.950 57.895 0.00 0.00 46.51 3.51
3431 4716 0.469331 ACCTTCTGGTGGTCGAGTGA 60.469 55.000 0.00 0.00 46.51 3.41
3432 4717 0.244994 CCTTCTGGTGGTCGAGTGAG 59.755 60.000 0.00 0.00 0.00 3.51
3433 4718 0.962489 CTTCTGGTGGTCGAGTGAGT 59.038 55.000 0.00 0.00 0.00 3.41
3434 4719 0.959553 TTCTGGTGGTCGAGTGAGTC 59.040 55.000 0.00 0.00 0.00 3.36
3435 4720 0.110678 TCTGGTGGTCGAGTGAGTCT 59.889 55.000 0.00 0.00 0.00 3.24
3436 4721 0.962489 CTGGTGGTCGAGTGAGTCTT 59.038 55.000 0.00 0.00 0.00 3.01
3437 4722 0.959553 TGGTGGTCGAGTGAGTCTTC 59.040 55.000 0.00 0.00 0.00 2.87
3438 4723 0.959553 GGTGGTCGAGTGAGTCTTCA 59.040 55.000 0.00 0.00 0.00 3.02
3439 4724 1.546476 GGTGGTCGAGTGAGTCTTCAT 59.454 52.381 0.00 0.00 35.39 2.57
3440 4725 2.600731 GTGGTCGAGTGAGTCTTCATG 58.399 52.381 0.00 0.00 35.39 3.07
3441 4726 1.546029 TGGTCGAGTGAGTCTTCATGG 59.454 52.381 0.00 0.00 35.39 3.66
3442 4727 1.546476 GGTCGAGTGAGTCTTCATGGT 59.454 52.381 0.00 0.00 35.39 3.55
3443 4728 2.416162 GGTCGAGTGAGTCTTCATGGTC 60.416 54.545 0.00 0.00 35.39 4.02
3444 4729 1.468914 TCGAGTGAGTCTTCATGGTCG 59.531 52.381 0.00 0.00 36.25 4.79
3445 4730 1.468914 CGAGTGAGTCTTCATGGTCGA 59.531 52.381 0.00 0.00 36.66 4.20
3446 4731 2.477021 CGAGTGAGTCTTCATGGTCGAG 60.477 54.545 0.00 0.00 36.66 4.04
3447 4732 2.490115 GAGTGAGTCTTCATGGTCGAGT 59.510 50.000 0.00 0.00 35.39 4.18
3448 4733 2.490115 AGTGAGTCTTCATGGTCGAGTC 59.510 50.000 0.00 0.68 35.39 3.36
3449 4734 1.819288 TGAGTCTTCATGGTCGAGTCC 59.181 52.381 0.00 0.00 0.00 3.85
3450 4735 2.096248 GAGTCTTCATGGTCGAGTCCT 58.904 52.381 0.00 0.00 0.00 3.85
3451 4736 2.494073 GAGTCTTCATGGTCGAGTCCTT 59.506 50.000 0.00 0.00 0.00 3.36
3452 4737 2.494073 AGTCTTCATGGTCGAGTCCTTC 59.506 50.000 0.00 0.00 0.00 3.46
3453 4738 2.231478 GTCTTCATGGTCGAGTCCTTCA 59.769 50.000 0.00 0.00 0.00 3.02
3454 4739 2.897326 TCTTCATGGTCGAGTCCTTCAA 59.103 45.455 0.00 0.00 0.00 2.69
3455 4740 3.056536 TCTTCATGGTCGAGTCCTTCAAG 60.057 47.826 0.00 0.00 0.00 3.02
3456 4741 2.248248 TCATGGTCGAGTCCTTCAAGT 58.752 47.619 0.00 0.00 0.00 3.16
3457 4742 2.231478 TCATGGTCGAGTCCTTCAAGTC 59.769 50.000 0.00 0.00 0.00 3.01
3458 4743 1.699730 TGGTCGAGTCCTTCAAGTCA 58.300 50.000 0.00 0.00 0.00 3.41
3459 4744 1.613925 TGGTCGAGTCCTTCAAGTCAG 59.386 52.381 0.00 0.00 0.00 3.51
3460 4745 1.614413 GGTCGAGTCCTTCAAGTCAGT 59.386 52.381 0.00 0.00 0.00 3.41
3461 4746 2.351932 GGTCGAGTCCTTCAAGTCAGTC 60.352 54.545 0.00 0.00 0.00 3.51
3462 4747 1.535896 TCGAGTCCTTCAAGTCAGTCG 59.464 52.381 4.97 4.97 33.79 4.18
3463 4748 1.535896 CGAGTCCTTCAAGTCAGTCGA 59.464 52.381 5.29 0.00 34.28 4.20
3464 4749 2.413502 CGAGTCCTTCAAGTCAGTCGAG 60.414 54.545 5.29 0.00 34.28 4.04
3465 4750 2.554893 GAGTCCTTCAAGTCAGTCGAGT 59.445 50.000 0.00 0.00 0.00 4.18
3466 4751 2.294791 AGTCCTTCAAGTCAGTCGAGTG 59.705 50.000 14.33 14.33 0.00 3.51
3467 4752 1.613925 TCCTTCAAGTCAGTCGAGTGG 59.386 52.381 19.86 4.25 0.00 4.00
3468 4753 1.337260 CCTTCAAGTCAGTCGAGTGGG 60.337 57.143 19.86 7.64 0.00 4.61
3469 4754 0.033504 TTCAAGTCAGTCGAGTGGGC 59.966 55.000 19.86 12.91 0.00 5.36
3470 4755 0.827925 TCAAGTCAGTCGAGTGGGCT 60.828 55.000 19.86 14.81 0.00 5.19
3471 4756 0.389166 CAAGTCAGTCGAGTGGGCTC 60.389 60.000 19.86 8.56 38.35 4.70
3472 4757 1.536943 AAGTCAGTCGAGTGGGCTCC 61.537 60.000 19.86 3.99 38.49 4.70
3473 4758 1.979693 GTCAGTCGAGTGGGCTCCT 60.980 63.158 19.86 0.00 38.49 3.69
3474 4759 1.679305 TCAGTCGAGTGGGCTCCTC 60.679 63.158 19.86 0.00 38.49 3.71
3478 4763 3.599584 CGAGTGGGCTCCTCGTAA 58.400 61.111 14.21 0.00 45.09 3.18
3479 4764 1.433879 CGAGTGGGCTCCTCGTAAG 59.566 63.158 14.21 0.00 45.09 2.34
3480 4765 1.313812 CGAGTGGGCTCCTCGTAAGT 61.314 60.000 14.21 0.00 45.09 2.24
3481 4766 0.456628 GAGTGGGCTCCTCGTAAGTC 59.543 60.000 0.00 0.00 35.76 3.01
3482 4767 1.139095 GTGGGCTCCTCGTAAGTCG 59.861 63.158 0.00 0.00 41.41 4.18
3483 4768 1.001764 TGGGCTCCTCGTAAGTCGA 60.002 57.895 0.00 0.00 46.83 4.20
3484 4769 1.310933 TGGGCTCCTCGTAAGTCGAC 61.311 60.000 7.70 7.70 44.01 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 4.641645 TTGGCCAGGCACGACAGG 62.642 66.667 15.19 0.00 0.00 4.00
7 8 2.594303 TTTGGCCAGGCACGACAG 60.594 61.111 15.19 0.00 0.00 3.51
8 9 2.904866 GTTTGGCCAGGCACGACA 60.905 61.111 15.19 0.00 0.00 4.35
9 10 4.025401 CGTTTGGCCAGGCACGAC 62.025 66.667 23.02 8.34 34.49 4.34
12 13 3.365265 CTCCGTTTGGCCAGGCAC 61.365 66.667 15.19 3.42 34.14 5.01
29 30 3.564027 CGGATTTGGAGCGACGGC 61.564 66.667 0.00 0.00 40.37 5.68
30 31 2.287457 TACCGGATTTGGAGCGACGG 62.287 60.000 9.46 0.00 46.16 4.79
31 32 1.140161 TACCGGATTTGGAGCGACG 59.860 57.895 9.46 0.00 0.00 5.12
32 33 0.175073 AGTACCGGATTTGGAGCGAC 59.825 55.000 9.46 0.00 0.00 5.19
33 34 0.458669 GAGTACCGGATTTGGAGCGA 59.541 55.000 9.46 0.00 0.00 4.93
34 35 0.460311 AGAGTACCGGATTTGGAGCG 59.540 55.000 9.46 0.00 0.00 5.03
35 36 1.202545 GGAGAGTACCGGATTTGGAGC 60.203 57.143 9.46 0.00 0.00 4.70
36 37 2.108168 TGGAGAGTACCGGATTTGGAG 58.892 52.381 9.46 0.00 0.00 3.86
37 38 1.829222 GTGGAGAGTACCGGATTTGGA 59.171 52.381 9.46 0.00 0.00 3.53
38 39 1.470979 CGTGGAGAGTACCGGATTTGG 60.471 57.143 9.46 0.00 0.00 3.28
39 40 1.922570 CGTGGAGAGTACCGGATTTG 58.077 55.000 9.46 0.00 0.00 2.32
40 41 0.175073 GCGTGGAGAGTACCGGATTT 59.825 55.000 9.46 0.00 0.00 2.17
41 42 0.968901 TGCGTGGAGAGTACCGGATT 60.969 55.000 9.46 0.00 0.00 3.01
42 43 1.379443 TGCGTGGAGAGTACCGGAT 60.379 57.895 9.46 0.00 0.00 4.18
43 44 2.034532 TGCGTGGAGAGTACCGGA 59.965 61.111 9.46 0.00 0.00 5.14
44 45 1.994507 CTCTGCGTGGAGAGTACCGG 61.995 65.000 9.94 0.00 35.64 5.28
45 46 1.429825 CTCTGCGTGGAGAGTACCG 59.570 63.158 9.94 0.00 35.64 4.02
46 47 1.810532 CCTCTGCGTGGAGAGTACC 59.189 63.158 15.86 0.00 38.28 3.34
47 48 1.139947 GCCTCTGCGTGGAGAGTAC 59.860 63.158 15.86 5.50 38.28 2.73
48 49 1.304134 TGCCTCTGCGTGGAGAGTA 60.304 57.895 15.86 3.62 41.78 2.59
49 50 2.601666 TGCCTCTGCGTGGAGAGT 60.602 61.111 15.86 0.00 41.78 3.24
50 51 2.183811 CTGCCTCTGCGTGGAGAG 59.816 66.667 11.05 11.05 41.78 3.20
51 52 3.385384 CCTGCCTCTGCGTGGAGA 61.385 66.667 8.05 0.00 41.78 3.71
52 53 4.463879 CCCTGCCTCTGCGTGGAG 62.464 72.222 1.66 0.83 41.78 3.86
80 81 4.483243 AAGTATGGTGGCGCCGGG 62.483 66.667 23.90 0.00 41.21 5.73
81 82 3.202001 CAAGTATGGTGGCGCCGG 61.202 66.667 23.90 0.00 41.21 6.13
82 83 3.202001 CCAAGTATGGTGGCGCCG 61.202 66.667 23.90 3.23 42.18 6.46
91 92 2.588877 CCCGAGGCGCCAAGTATG 60.589 66.667 31.54 10.84 0.00 2.39
92 93 4.547367 GCCCGAGGCGCCAAGTAT 62.547 66.667 31.54 7.13 39.62 2.12
134 135 4.227134 CATCCCACCTCCTCGCCG 62.227 72.222 0.00 0.00 0.00 6.46
135 136 2.764128 TCATCCCACCTCCTCGCC 60.764 66.667 0.00 0.00 0.00 5.54
136 137 2.801631 CCTCATCCCACCTCCTCGC 61.802 68.421 0.00 0.00 0.00 5.03
137 138 1.381872 ACCTCATCCCACCTCCTCG 60.382 63.158 0.00 0.00 0.00 4.63
138 139 1.341156 CCACCTCATCCCACCTCCTC 61.341 65.000 0.00 0.00 0.00 3.71
139 140 1.307343 CCACCTCATCCCACCTCCT 60.307 63.158 0.00 0.00 0.00 3.69
140 141 2.378634 CCCACCTCATCCCACCTCC 61.379 68.421 0.00 0.00 0.00 4.30
141 142 2.378634 CCCCACCTCATCCCACCTC 61.379 68.421 0.00 0.00 0.00 3.85
142 143 2.286425 CCCCACCTCATCCCACCT 60.286 66.667 0.00 0.00 0.00 4.00
143 144 2.286121 TCCCCACCTCATCCCACC 60.286 66.667 0.00 0.00 0.00 4.61
144 145 1.306997 TCTCCCCACCTCATCCCAC 60.307 63.158 0.00 0.00 0.00 4.61
145 146 1.003442 CTCTCCCCACCTCATCCCA 59.997 63.158 0.00 0.00 0.00 4.37
146 147 1.768077 CCTCTCCCCACCTCATCCC 60.768 68.421 0.00 0.00 0.00 3.85
147 148 1.768077 CCCTCTCCCCACCTCATCC 60.768 68.421 0.00 0.00 0.00 3.51
148 149 2.447714 GCCCTCTCCCCACCTCATC 61.448 68.421 0.00 0.00 0.00 2.92
149 150 2.367512 GCCCTCTCCCCACCTCAT 60.368 66.667 0.00 0.00 0.00 2.90
150 151 4.741239 GGCCCTCTCCCCACCTCA 62.741 72.222 0.00 0.00 0.00 3.86
219 220 1.615424 TTAGGAGGGTGGGCTGACC 60.615 63.158 0.00 0.00 40.81 4.02
220 221 1.602771 GTTAGGAGGGTGGGCTGAC 59.397 63.158 0.00 0.00 0.00 3.51
221 222 1.615424 GGTTAGGAGGGTGGGCTGA 60.615 63.158 0.00 0.00 0.00 4.26
259 260 4.580580 GTGATATTGCCTGGTCCTAAAAGG 59.419 45.833 0.00 0.00 36.46 3.11
264 265 3.111484 TGTGTGATATTGCCTGGTCCTA 58.889 45.455 0.00 0.00 0.00 2.94
269 270 2.048444 AGCTGTGTGATATTGCCTGG 57.952 50.000 0.00 0.00 0.00 4.45
292 293 3.458189 GGGAGATAGGTGTTGAATCACG 58.542 50.000 0.00 0.00 39.00 4.35
308 309 1.745115 CAAATGAAGCGCCGGGAGA 60.745 57.895 2.29 0.00 0.00 3.71
320 321 2.749076 CGAGTGGAAGATTGCCAAATGA 59.251 45.455 0.00 0.00 37.12 2.57
349 350 4.496336 ATGAAGCTGGAGGGCCGC 62.496 66.667 0.00 0.00 36.79 6.53
350 351 0.967380 AAAATGAAGCTGGAGGGCCG 60.967 55.000 0.00 0.00 36.79 6.13
371 372 2.337583 CGCGTGAGATGGAGAAAAAGA 58.662 47.619 0.00 0.00 0.00 2.52
390 391 3.966154 ACAACTACCATAGAATCTCGCG 58.034 45.455 0.00 0.00 0.00 5.87
398 399 2.112998 CCCGGGAACAACTACCATAGA 58.887 52.381 18.48 0.00 0.00 1.98
403 405 0.746923 GCATCCCGGGAACAACTACC 60.747 60.000 30.84 5.81 0.00 3.18
404 406 0.252197 AGCATCCCGGGAACAACTAC 59.748 55.000 30.84 11.73 0.00 2.73
409 411 0.758734 CAGATAGCATCCCGGGAACA 59.241 55.000 30.84 13.37 0.00 3.18
415 417 1.626686 AGAGTCCAGATAGCATCCCG 58.373 55.000 0.00 0.00 0.00 5.14
417 419 7.363443 GGTTTATCTAGAGTCCAGATAGCATCC 60.363 44.444 8.10 6.55 36.59 3.51
424 426 6.678547 AGTCAGGTTTATCTAGAGTCCAGAT 58.321 40.000 6.33 6.33 36.68 2.90
429 431 8.212995 AGGTAGTAGTCAGGTTTATCTAGAGTC 58.787 40.741 0.00 0.00 0.00 3.36
430 432 8.104838 AGGTAGTAGTCAGGTTTATCTAGAGT 57.895 38.462 0.00 0.00 0.00 3.24
431 433 8.983702 AAGGTAGTAGTCAGGTTTATCTAGAG 57.016 38.462 0.00 0.00 0.00 2.43
432 434 8.554870 TGAAGGTAGTAGTCAGGTTTATCTAGA 58.445 37.037 0.00 0.00 0.00 2.43
433 435 8.749026 TGAAGGTAGTAGTCAGGTTTATCTAG 57.251 38.462 0.00 0.00 0.00 2.43
434 436 9.352191 GATGAAGGTAGTAGTCAGGTTTATCTA 57.648 37.037 0.00 0.00 0.00 1.98
435 437 7.288158 GGATGAAGGTAGTAGTCAGGTTTATCT 59.712 40.741 0.00 0.00 0.00 1.98
458 460 7.738437 ACAAAATGGACCAATAAATCAGGAT 57.262 32.000 0.00 0.00 0.00 3.24
460 462 9.889128 AATTACAAAATGGACCAATAAATCAGG 57.111 29.630 0.00 0.00 0.00 3.86
533 535 9.482627 GGAATCCAACAATATGTTTTGTTAACA 57.517 29.630 3.59 3.59 45.54 2.41
594 598 5.910637 AACAAAATGTTCATGCATGTCAC 57.089 34.783 25.43 21.75 35.27 3.67
627 631 8.462811 TCGTATTCTATGCCAAATTTTGCTAAA 58.537 29.630 14.62 0.00 0.00 1.85
629 633 7.561021 TCGTATTCTATGCCAAATTTTGCTA 57.439 32.000 14.62 2.99 0.00 3.49
631 635 6.144402 CCATCGTATTCTATGCCAAATTTTGC 59.856 38.462 7.29 7.29 0.00 3.68
632 636 6.642131 CCCATCGTATTCTATGCCAAATTTTG 59.358 38.462 1.99 1.99 0.00 2.44
656 660 3.467803 CTCGGTCCTGATTTATTGGTCC 58.532 50.000 0.00 0.00 0.00 4.46
682 687 9.316730 CCAAAATAAGTATACCGTAGTTTGCTA 57.683 33.333 20.79 0.00 0.00 3.49
683 688 8.042515 TCCAAAATAAGTATACCGTAGTTTGCT 58.957 33.333 20.79 0.00 0.00 3.91
685 690 9.977762 GTTCCAAAATAAGTATACCGTAGTTTG 57.022 33.333 19.97 19.97 0.00 2.93
687 692 7.492344 CCGTTCCAAAATAAGTATACCGTAGTT 59.508 37.037 0.00 0.00 0.00 2.24
688 693 6.980397 CCGTTCCAAAATAAGTATACCGTAGT 59.020 38.462 0.00 0.00 0.00 2.73
689 694 7.202526 TCCGTTCCAAAATAAGTATACCGTAG 58.797 38.462 0.00 0.00 0.00 3.51
690 695 7.106439 TCCGTTCCAAAATAAGTATACCGTA 57.894 36.000 0.00 0.00 0.00 4.02
692 697 5.464389 CCTCCGTTCCAAAATAAGTATACCG 59.536 44.000 0.00 0.00 0.00 4.02
693 698 5.761726 CCCTCCGTTCCAAAATAAGTATACC 59.238 44.000 0.00 0.00 0.00 2.73
695 700 6.384886 ACTCCCTCCGTTCCAAAATAAGTATA 59.615 38.462 0.00 0.00 0.00 1.47
696 701 5.191124 ACTCCCTCCGTTCCAAAATAAGTAT 59.809 40.000 0.00 0.00 0.00 2.12
699 704 3.951663 ACTCCCTCCGTTCCAAAATAAG 58.048 45.455 0.00 0.00 0.00 1.73
700 705 5.221884 TGTTACTCCCTCCGTTCCAAAATAA 60.222 40.000 0.00 0.00 0.00 1.40
701 706 4.286549 TGTTACTCCCTCCGTTCCAAAATA 59.713 41.667 0.00 0.00 0.00 1.40
702 707 3.073356 TGTTACTCCCTCCGTTCCAAAAT 59.927 43.478 0.00 0.00 0.00 1.82
703 708 2.438763 TGTTACTCCCTCCGTTCCAAAA 59.561 45.455 0.00 0.00 0.00 2.44
705 710 1.621814 CTGTTACTCCCTCCGTTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
706 711 1.263356 CTGTTACTCCCTCCGTTCCA 58.737 55.000 0.00 0.00 0.00 3.53
707 712 1.264295 ACTGTTACTCCCTCCGTTCC 58.736 55.000 0.00 0.00 0.00 3.62
708 713 4.021632 AGTTAACTGTTACTCCCTCCGTTC 60.022 45.833 7.48 0.00 0.00 3.95
709 714 3.899980 AGTTAACTGTTACTCCCTCCGTT 59.100 43.478 7.48 0.00 0.00 4.44
710 715 3.504375 AGTTAACTGTTACTCCCTCCGT 58.496 45.455 7.48 0.00 0.00 4.69
711 716 4.107363 GAGTTAACTGTTACTCCCTCCG 57.893 50.000 14.14 0.00 35.78 4.63
717 722 5.876612 TCTCGAGGAGTTAACTGTTACTC 57.123 43.478 14.14 13.16 40.00 2.59
724 729 2.457598 TGGCATCTCGAGGAGTTAACT 58.542 47.619 13.56 8.13 0.00 2.24
763 1452 1.136169 CACTTTAACGCAACGGTAGGC 60.136 52.381 0.00 0.00 28.40 3.93
775 1471 7.081976 GGTGTCATGGTTAACATCACTTTAAC 58.918 38.462 8.10 0.00 37.84 2.01
807 1503 1.003118 ACAAATTAGAGCCGCTGTCCA 59.997 47.619 0.00 0.00 0.00 4.02
843 1541 3.877508 AGTAGTTGGTTCACTTCACTTGC 59.122 43.478 0.00 0.00 0.00 4.01
925 1735 1.904990 GAGGGTTGGGAGGAGAGCAC 61.905 65.000 0.00 0.00 0.00 4.40
961 1780 0.168348 GACGTCGTGCTGAAGAGCTA 59.832 55.000 0.63 0.00 46.39 3.32
1023 1842 2.740714 GCTCGCCGGTAGCAGTTTG 61.741 63.158 21.61 0.00 44.04 2.93
1276 2095 3.195002 CATGACGCGTTCGGGCAT 61.195 61.111 15.53 9.12 40.69 4.40
1654 2473 1.792006 GTGTTCACGAGAATCCCGTT 58.208 50.000 0.00 0.00 38.29 4.44
1773 2598 2.915659 TCCCTGTTCACGCCGACT 60.916 61.111 0.00 0.00 0.00 4.18
2368 3226 1.747924 TCCGTCTCTGAGCTCATCAAG 59.252 52.381 18.63 14.81 37.52 3.02
2372 3230 1.391157 GCCTCCGTCTCTGAGCTCAT 61.391 60.000 18.63 0.00 0.00 2.90
2417 3275 6.169557 TCTTGGCTAGTGTAAGAGTTGAAA 57.830 37.500 0.00 0.00 0.00 2.69
2499 3357 4.025813 GCGGTGGCTTGCAAAAATATATTG 60.026 41.667 0.00 0.00 35.83 1.90
2540 3398 7.466590 GCTTTACAAGATGGAGAATGCTTCTAC 60.467 40.741 2.23 2.23 39.97 2.59
2573 3431 1.373590 CCCGCTTAACCATCCAACCG 61.374 60.000 0.00 0.00 0.00 4.44
2575 3433 0.963355 TGCCCGCTTAACCATCCAAC 60.963 55.000 0.00 0.00 0.00 3.77
2579 3437 0.385390 CCATTGCCCGCTTAACCATC 59.615 55.000 0.00 0.00 0.00 3.51
2605 3463 5.295950 CAGGACTTGAACTATCATAGGCTG 58.704 45.833 0.00 0.00 34.96 4.85
2613 3471 3.629398 CCATTGCCAGGACTTGAACTATC 59.371 47.826 0.00 0.00 0.00 2.08
2615 3473 2.375174 ACCATTGCCAGGACTTGAACTA 59.625 45.455 0.00 0.00 0.00 2.24
2617 3475 1.620822 ACCATTGCCAGGACTTGAAC 58.379 50.000 0.00 0.00 0.00 3.18
2618 3476 3.266772 AGATACCATTGCCAGGACTTGAA 59.733 43.478 0.00 0.00 0.00 2.69
2619 3477 2.846206 AGATACCATTGCCAGGACTTGA 59.154 45.455 0.00 0.00 0.00 3.02
2620 3478 3.209410 GAGATACCATTGCCAGGACTTG 58.791 50.000 0.00 0.00 0.00 3.16
2621 3479 2.173569 GGAGATACCATTGCCAGGACTT 59.826 50.000 0.00 0.00 38.79 3.01
2622 3480 1.771255 GGAGATACCATTGCCAGGACT 59.229 52.381 0.00 0.00 38.79 3.85
2623 3481 1.490490 TGGAGATACCATTGCCAGGAC 59.510 52.381 0.00 0.00 44.64 3.85
2624 3482 1.891933 TGGAGATACCATTGCCAGGA 58.108 50.000 0.00 0.00 44.64 3.86
2633 3491 8.135355 TTGAACTATCATAGGCTGGAGATACCA 61.135 40.741 0.00 0.00 39.99 3.25
2635 3493 6.842437 TGAACTATCATAGGCTGGAGATAC 57.158 41.667 0.00 0.00 0.00 2.24
2641 3499 4.346418 AGGACTTGAACTATCATAGGCTGG 59.654 45.833 0.00 0.00 34.96 4.85
2646 3504 7.504238 ACCAGTCTAGGACTTGAACTATCATAG 59.496 40.741 5.90 0.00 41.37 2.23
2649 3507 5.419155 CACCAGTCTAGGACTTGAACTATCA 59.581 44.000 5.90 0.00 41.37 2.15
2650 3508 5.680151 GCACCAGTCTAGGACTTGAACTATC 60.680 48.000 5.90 0.00 41.37 2.08
2652 3510 3.510360 GCACCAGTCTAGGACTTGAACTA 59.490 47.826 5.90 0.00 41.37 2.24
2734 3661 7.042321 ACAGACGATTTTGTAGTCGATGAAAAA 60.042 33.333 1.49 0.00 40.11 1.94
2740 4018 4.174009 CCACAGACGATTTTGTAGTCGAT 58.826 43.478 1.49 0.00 40.11 3.59
2753 4031 2.254350 CGAAGTCGCCACAGACGA 59.746 61.111 0.00 0.00 45.26 4.20
2827 4106 0.516322 CGCAAACGCACATACACTCG 60.516 55.000 0.00 0.00 0.00 4.18
2940 4224 3.678056 TCACTATATTTGCCCGCTAGG 57.322 47.619 0.00 0.00 39.47 3.02
2945 4229 5.280945 CCAAAACATCACTATATTTGCCCG 58.719 41.667 0.00 0.00 31.36 6.13
2950 4234 7.931578 TTCGACCCAAAACATCACTATATTT 57.068 32.000 0.00 0.00 0.00 1.40
2978 4263 1.433534 GTTGCTGTGTGCTCCTCTAC 58.566 55.000 0.00 0.00 43.37 2.59
3033 4318 1.192428 ACCACGACAGTAGGGATTCC 58.808 55.000 0.00 0.00 0.00 3.01
3052 4337 5.010933 CCCACTCTACTGTCAGACTTAGAA 58.989 45.833 6.91 0.00 0.00 2.10
3055 4340 3.563697 CCCCCACTCTACTGTCAGACTTA 60.564 52.174 6.91 0.00 0.00 2.24
3056 4341 2.530701 CCCCACTCTACTGTCAGACTT 58.469 52.381 6.91 0.00 0.00 3.01
3058 4343 1.187087 CCCCCACTCTACTGTCAGAC 58.813 60.000 6.91 0.00 0.00 3.51
3074 4359 1.057471 GCCTCTTCATACCTACCCCC 58.943 60.000 0.00 0.00 0.00 5.40
3076 4361 2.104963 CCTTGCCTCTTCATACCTACCC 59.895 54.545 0.00 0.00 0.00 3.69
3077 4362 2.772515 ACCTTGCCTCTTCATACCTACC 59.227 50.000 0.00 0.00 0.00 3.18
3078 4363 3.181464 GGACCTTGCCTCTTCATACCTAC 60.181 52.174 0.00 0.00 0.00 3.18
3079 4364 3.039011 GGACCTTGCCTCTTCATACCTA 58.961 50.000 0.00 0.00 0.00 3.08
3080 4365 1.840635 GGACCTTGCCTCTTCATACCT 59.159 52.381 0.00 0.00 0.00 3.08
3081 4366 1.840635 AGGACCTTGCCTCTTCATACC 59.159 52.381 0.00 0.00 30.76 2.73
3085 4370 1.276622 GGTAGGACCTTGCCTCTTCA 58.723 55.000 0.00 0.00 39.50 3.02
3108 4393 4.448210 TCACTTGTGTTTACAACCTCTCC 58.552 43.478 0.46 0.00 41.66 3.71
3110 4395 5.437060 ACATCACTTGTGTTTACAACCTCT 58.563 37.500 0.46 0.00 41.66 3.69
3111 4396 5.751243 ACATCACTTGTGTTTACAACCTC 57.249 39.130 0.46 0.00 41.66 3.85
3113 4398 5.234757 TCGTACATCACTTGTGTTTACAACC 59.765 40.000 0.46 0.00 41.66 3.77
3115 4400 6.044046 ACTCGTACATCACTTGTGTTTACAA 58.956 36.000 0.46 0.00 44.17 2.41
3118 4403 6.274579 TGAACTCGTACATCACTTGTGTTTA 58.725 36.000 0.46 0.00 39.48 2.01
3119 4404 5.113383 TGAACTCGTACATCACTTGTGTTT 58.887 37.500 0.46 0.00 39.48 2.83
3120 4405 4.689071 TGAACTCGTACATCACTTGTGTT 58.311 39.130 0.46 0.00 39.48 3.32
3121 4406 4.299155 CTGAACTCGTACATCACTTGTGT 58.701 43.478 0.46 0.00 39.48 3.72
3122 4407 3.675225 CCTGAACTCGTACATCACTTGTG 59.325 47.826 0.00 0.00 39.48 3.33
3125 4410 2.353803 GGCCTGAACTCGTACATCACTT 60.354 50.000 0.00 0.00 0.00 3.16
3128 4413 0.535335 GGGCCTGAACTCGTACATCA 59.465 55.000 0.84 0.00 0.00 3.07
3130 4415 1.207329 GAAGGGCCTGAACTCGTACAT 59.793 52.381 6.92 0.00 0.00 2.29
3131 4416 0.606604 GAAGGGCCTGAACTCGTACA 59.393 55.000 6.92 0.00 0.00 2.90
3132 4417 0.896226 AGAAGGGCCTGAACTCGTAC 59.104 55.000 6.92 0.00 0.00 3.67
3133 4418 1.183549 GAGAAGGGCCTGAACTCGTA 58.816 55.000 6.92 0.00 0.00 3.43
3135 4420 0.108424 CTGAGAAGGGCCTGAACTCG 60.108 60.000 21.82 15.83 0.00 4.18
3140 4425 0.117140 TTCCTCTGAGAAGGGCCTGA 59.883 55.000 6.92 0.00 37.02 3.86
3141 4426 0.540923 CTTCCTCTGAGAAGGGCCTG 59.459 60.000 6.92 0.00 39.71 4.85
3143 4428 1.867363 TACTTCCTCTGAGAAGGGCC 58.133 55.000 6.17 0.00 46.24 5.80
3144 4429 3.983044 TTTACTTCCTCTGAGAAGGGC 57.017 47.619 6.17 0.00 46.24 5.19
3146 4431 4.257731 GGCTTTTACTTCCTCTGAGAAGG 58.742 47.826 6.17 0.00 46.24 3.46
3148 4433 3.910627 AGGGCTTTTACTTCCTCTGAGAA 59.089 43.478 6.17 0.00 0.00 2.87
3149 4434 3.521727 AGGGCTTTTACTTCCTCTGAGA 58.478 45.455 6.17 0.00 0.00 3.27
3150 4435 3.990959 AGGGCTTTTACTTCCTCTGAG 57.009 47.619 0.00 0.00 0.00 3.35
3151 4436 3.194968 CGTAGGGCTTTTACTTCCTCTGA 59.805 47.826 0.00 0.00 0.00 3.27
3152 4437 3.056035 ACGTAGGGCTTTTACTTCCTCTG 60.056 47.826 0.00 0.00 0.00 3.35
3153 4438 3.171528 ACGTAGGGCTTTTACTTCCTCT 58.828 45.455 0.00 0.00 0.00 3.69
3154 4439 3.195182 AGACGTAGGGCTTTTACTTCCTC 59.805 47.826 0.00 0.00 0.00 3.71
3156 4441 3.519579 GAGACGTAGGGCTTTTACTTCC 58.480 50.000 0.00 0.00 0.00 3.46
3157 4442 3.177487 CGAGACGTAGGGCTTTTACTTC 58.823 50.000 0.00 0.00 0.00 3.01
3158 4443 2.094338 CCGAGACGTAGGGCTTTTACTT 60.094 50.000 0.00 0.00 0.00 2.24
3159 4444 1.475682 CCGAGACGTAGGGCTTTTACT 59.524 52.381 0.00 0.00 0.00 2.24
3160 4445 1.474077 TCCGAGACGTAGGGCTTTTAC 59.526 52.381 0.00 0.00 0.00 2.01
3161 4446 1.747355 CTCCGAGACGTAGGGCTTTTA 59.253 52.381 0.00 0.00 0.00 1.52
3163 4448 1.946475 GCTCCGAGACGTAGGGCTTT 61.946 60.000 0.00 0.00 0.00 3.51
3164 4449 2.416432 GCTCCGAGACGTAGGGCTT 61.416 63.158 0.00 0.00 0.00 4.35
3165 4450 2.829458 GCTCCGAGACGTAGGGCT 60.829 66.667 0.00 0.00 0.00 5.19
3166 4451 3.902086 GGCTCCGAGACGTAGGGC 61.902 72.222 0.00 0.00 0.00 5.19
3185 4470 1.389609 TAATCCACTCGACCGCCTCC 61.390 60.000 0.00 0.00 0.00 4.30
3186 4471 0.674534 ATAATCCACTCGACCGCCTC 59.325 55.000 0.00 0.00 0.00 4.70
3188 4473 2.230508 TCATATAATCCACTCGACCGCC 59.769 50.000 0.00 0.00 0.00 6.13
3189 4474 3.057456 ACTCATATAATCCACTCGACCGC 60.057 47.826 0.00 0.00 0.00 5.68
3190 4475 4.768130 ACTCATATAATCCACTCGACCG 57.232 45.455 0.00 0.00 0.00 4.79
3192 4477 7.392494 TCCATACTCATATAATCCACTCGAC 57.608 40.000 0.00 0.00 0.00 4.20
3194 4479 9.737427 GTAATCCATACTCATATAATCCACTCG 57.263 37.037 0.00 0.00 0.00 4.18
3197 4482 9.823647 CCTGTAATCCATACTCATATAATCCAC 57.176 37.037 0.00 0.00 35.42 4.02
3198 4483 8.992349 CCCTGTAATCCATACTCATATAATCCA 58.008 37.037 0.00 0.00 35.42 3.41
3199 4484 8.432805 CCCCTGTAATCCATACTCATATAATCC 58.567 40.741 0.00 0.00 35.42 3.01
3200 4485 8.993424 ACCCCTGTAATCCATACTCATATAATC 58.007 37.037 0.00 0.00 35.42 1.75
3201 4486 8.772250 CACCCCTGTAATCCATACTCATATAAT 58.228 37.037 0.00 0.00 35.42 1.28
3202 4487 7.311046 GCACCCCTGTAATCCATACTCATATAA 60.311 40.741 0.00 0.00 35.42 0.98
3204 4489 5.045578 GCACCCCTGTAATCCATACTCATAT 60.046 44.000 0.00 0.00 35.42 1.78
3205 4490 4.286032 GCACCCCTGTAATCCATACTCATA 59.714 45.833 0.00 0.00 35.42 2.15
3206 4491 3.073062 GCACCCCTGTAATCCATACTCAT 59.927 47.826 0.00 0.00 35.42 2.90
3207 4492 2.438021 GCACCCCTGTAATCCATACTCA 59.562 50.000 0.00 0.00 35.42 3.41
3208 4493 2.224548 GGCACCCCTGTAATCCATACTC 60.225 54.545 0.00 0.00 35.42 2.59
3209 4494 1.774856 GGCACCCCTGTAATCCATACT 59.225 52.381 0.00 0.00 35.42 2.12
3211 4496 1.900254 TGGCACCCCTGTAATCCATA 58.100 50.000 0.00 0.00 0.00 2.74
3213 4498 0.039035 GTTGGCACCCCTGTAATCCA 59.961 55.000 0.00 0.00 0.00 3.41
3214 4499 0.683179 GGTTGGCACCCCTGTAATCC 60.683 60.000 0.00 0.00 37.03 3.01
3215 4500 2.882170 GGTTGGCACCCCTGTAATC 58.118 57.895 0.00 0.00 37.03 1.75
3224 4509 2.991540 GGCAGAAGGGTTGGCACC 60.992 66.667 0.00 0.00 43.37 5.01
3225 4510 2.116125 AGGCAGAAGGGTTGGCAC 59.884 61.111 0.00 0.00 42.98 5.01
3226 4511 2.115910 CAGGCAGAAGGGTTGGCA 59.884 61.111 1.68 0.00 42.98 4.92
3227 4512 2.116125 ACAGGCAGAAGGGTTGGC 59.884 61.111 0.00 0.00 41.05 4.52
3228 4513 1.604593 CCACAGGCAGAAGGGTTGG 60.605 63.158 0.00 0.00 0.00 3.77
3229 4514 0.607489 CTCCACAGGCAGAAGGGTTG 60.607 60.000 0.00 0.00 0.00 3.77
3230 4515 1.763770 CTCCACAGGCAGAAGGGTT 59.236 57.895 0.00 0.00 0.00 4.11
3231 4516 2.227036 CCTCCACAGGCAGAAGGGT 61.227 63.158 0.00 0.00 30.98 4.34
3232 4517 2.673523 CCTCCACAGGCAGAAGGG 59.326 66.667 0.00 0.00 30.98 3.95
3233 4518 2.673523 CCCTCCACAGGCAGAAGG 59.326 66.667 0.00 0.00 38.72 3.46
3234 4519 2.673523 CCCCTCCACAGGCAGAAG 59.326 66.667 0.00 0.00 38.72 2.85
3235 4520 2.935481 CCCCCTCCACAGGCAGAA 60.935 66.667 0.00 0.00 38.72 3.02
3236 4521 4.270153 ACCCCCTCCACAGGCAGA 62.270 66.667 0.00 0.00 38.72 4.26
3237 4522 4.039092 CACCCCCTCCACAGGCAG 62.039 72.222 0.00 0.00 38.72 4.85
3241 4526 1.281925 ATAAGCCACCCCCTCCACAG 61.282 60.000 0.00 0.00 0.00 3.66
3242 4527 0.045008 TATAAGCCACCCCCTCCACA 59.955 55.000 0.00 0.00 0.00 4.17
3243 4528 1.446016 ATATAAGCCACCCCCTCCAC 58.554 55.000 0.00 0.00 0.00 4.02
3244 4529 2.457126 TCTATATAAGCCACCCCCTCCA 59.543 50.000 0.00 0.00 0.00 3.86
3245 4530 3.108376 CTCTATATAAGCCACCCCCTCC 58.892 54.545 0.00 0.00 0.00 4.30
3246 4531 3.792515 ACTCTATATAAGCCACCCCCTC 58.207 50.000 0.00 0.00 0.00 4.30
3247 4532 3.945283 ACTCTATATAAGCCACCCCCT 57.055 47.619 0.00 0.00 0.00 4.79
3248 4533 3.446516 CGTACTCTATATAAGCCACCCCC 59.553 52.174 0.00 0.00 0.00 5.40
3249 4534 3.119209 GCGTACTCTATATAAGCCACCCC 60.119 52.174 0.00 0.00 0.00 4.95
3250 4535 3.119209 GGCGTACTCTATATAAGCCACCC 60.119 52.174 4.40 0.00 44.02 4.61
3251 4536 4.107363 GGCGTACTCTATATAAGCCACC 57.893 50.000 4.40 0.00 44.02 4.61
3254 4539 4.015084 TCCTGGCGTACTCTATATAAGCC 58.985 47.826 2.49 2.49 44.61 4.35
3255 4540 4.142425 GGTCCTGGCGTACTCTATATAAGC 60.142 50.000 0.00 0.00 0.00 3.09
3256 4541 4.398673 GGGTCCTGGCGTACTCTATATAAG 59.601 50.000 0.00 0.00 0.00 1.73
3257 4542 4.338879 GGGTCCTGGCGTACTCTATATAA 58.661 47.826 0.00 0.00 0.00 0.98
3258 4543 3.308688 GGGGTCCTGGCGTACTCTATATA 60.309 52.174 0.00 0.00 0.00 0.86
3259 4544 2.557005 GGGGTCCTGGCGTACTCTATAT 60.557 54.545 0.00 0.00 0.00 0.86
3260 4545 1.202976 GGGGTCCTGGCGTACTCTATA 60.203 57.143 0.00 0.00 0.00 1.31
3261 4546 0.469518 GGGGTCCTGGCGTACTCTAT 60.470 60.000 0.00 0.00 0.00 1.98
3262 4547 1.076485 GGGGTCCTGGCGTACTCTA 60.076 63.158 0.00 0.00 0.00 2.43
3263 4548 2.363925 GGGGTCCTGGCGTACTCT 60.364 66.667 0.00 0.00 0.00 3.24
3264 4549 2.363925 AGGGGTCCTGGCGTACTC 60.364 66.667 0.00 0.00 29.57 2.59
3278 4563 3.344137 ATTACGTGGGCTGGCAGGG 62.344 63.158 17.64 0.00 0.00 4.45
3279 4564 2.114670 CATTACGTGGGCTGGCAGG 61.115 63.158 17.64 0.96 0.00 4.85
3280 4565 0.676466 TTCATTACGTGGGCTGGCAG 60.676 55.000 10.94 10.94 0.00 4.85
3281 4566 0.676466 CTTCATTACGTGGGCTGGCA 60.676 55.000 0.00 0.00 0.00 4.92
3282 4567 1.376609 CCTTCATTACGTGGGCTGGC 61.377 60.000 0.00 0.00 0.00 4.85
3283 4568 0.748005 CCCTTCATTACGTGGGCTGG 60.748 60.000 0.00 0.00 32.49 4.85
3284 4569 0.035439 ACCCTTCATTACGTGGGCTG 60.035 55.000 6.31 0.00 43.25 4.85
3285 4570 0.696501 AACCCTTCATTACGTGGGCT 59.303 50.000 6.31 0.00 43.25 5.19
3286 4571 1.541379 AAACCCTTCATTACGTGGGC 58.459 50.000 6.31 0.00 43.25 5.36
3287 4572 4.763279 ACTTTAAACCCTTCATTACGTGGG 59.237 41.667 0.00 0.55 44.89 4.61
3288 4573 5.952526 ACTTTAAACCCTTCATTACGTGG 57.047 39.130 0.00 0.00 0.00 4.94
3289 4574 7.424227 TGTACTTTAAACCCTTCATTACGTG 57.576 36.000 0.00 0.00 0.00 4.49
3290 4575 8.625786 AATGTACTTTAAACCCTTCATTACGT 57.374 30.769 0.00 0.00 0.00 3.57
3296 4581 9.280174 CAGACTTAATGTACTTTAAACCCTTCA 57.720 33.333 13.21 0.00 0.00 3.02
3297 4582 8.727910 CCAGACTTAATGTACTTTAAACCCTTC 58.272 37.037 13.21 6.79 0.00 3.46
3298 4583 7.668469 CCCAGACTTAATGTACTTTAAACCCTT 59.332 37.037 13.21 0.00 0.00 3.95
3299 4584 7.173032 CCCAGACTTAATGTACTTTAAACCCT 58.827 38.462 13.21 8.63 0.00 4.34
3300 4585 6.376299 CCCCAGACTTAATGTACTTTAAACCC 59.624 42.308 13.21 7.04 0.00 4.11
3301 4586 6.127814 GCCCCAGACTTAATGTACTTTAAACC 60.128 42.308 13.21 8.86 0.00 3.27
3302 4587 6.402875 CGCCCCAGACTTAATGTACTTTAAAC 60.403 42.308 13.21 10.65 0.00 2.01
3303 4588 5.644636 CGCCCCAGACTTAATGTACTTTAAA 59.355 40.000 13.21 0.00 0.00 1.52
3304 4589 5.180271 CGCCCCAGACTTAATGTACTTTAA 58.820 41.667 12.03 12.03 0.00 1.52
3305 4590 4.223477 ACGCCCCAGACTTAATGTACTTTA 59.777 41.667 0.00 0.00 0.00 1.85
3306 4591 3.008704 ACGCCCCAGACTTAATGTACTTT 59.991 43.478 0.00 0.00 0.00 2.66
3307 4592 2.570302 ACGCCCCAGACTTAATGTACTT 59.430 45.455 0.00 0.00 0.00 2.24
3308 4593 2.185387 ACGCCCCAGACTTAATGTACT 58.815 47.619 0.00 0.00 0.00 2.73
3309 4594 2.685850 ACGCCCCAGACTTAATGTAC 57.314 50.000 0.00 0.00 0.00 2.90
3310 4595 3.770933 AGTAACGCCCCAGACTTAATGTA 59.229 43.478 0.00 0.00 0.00 2.29
3311 4596 2.570302 AGTAACGCCCCAGACTTAATGT 59.430 45.455 0.00 0.00 0.00 2.71
3312 4597 2.936498 CAGTAACGCCCCAGACTTAATG 59.064 50.000 0.00 0.00 0.00 1.90
3313 4598 2.093128 CCAGTAACGCCCCAGACTTAAT 60.093 50.000 0.00 0.00 0.00 1.40
3314 4599 1.276989 CCAGTAACGCCCCAGACTTAA 59.723 52.381 0.00 0.00 0.00 1.85
3315 4600 0.899720 CCAGTAACGCCCCAGACTTA 59.100 55.000 0.00 0.00 0.00 2.24
3316 4601 1.125711 ACCAGTAACGCCCCAGACTT 61.126 55.000 0.00 0.00 0.00 3.01
3317 4602 0.251922 TACCAGTAACGCCCCAGACT 60.252 55.000 0.00 0.00 0.00 3.24
3318 4603 0.609662 TTACCAGTAACGCCCCAGAC 59.390 55.000 0.00 0.00 0.00 3.51
3319 4604 0.609662 GTTACCAGTAACGCCCCAGA 59.390 55.000 5.02 0.00 36.47 3.86
3320 4605 3.148340 GTTACCAGTAACGCCCCAG 57.852 57.895 5.02 0.00 36.47 4.45
3327 4612 0.035176 TGTGGGGCGTTACCAGTAAC 59.965 55.000 10.09 10.09 42.05 2.50
3328 4613 0.985760 ATGTGGGGCGTTACCAGTAA 59.014 50.000 0.00 0.00 42.05 2.24
3329 4614 1.863325 TATGTGGGGCGTTACCAGTA 58.137 50.000 0.00 0.00 42.05 2.74
3330 4615 0.985760 TTATGTGGGGCGTTACCAGT 59.014 50.000 0.00 0.00 42.05 4.00
3331 4616 2.014128 CTTTATGTGGGGCGTTACCAG 58.986 52.381 0.00 0.00 42.05 4.00
3332 4617 1.351683 ACTTTATGTGGGGCGTTACCA 59.648 47.619 0.00 0.00 42.05 3.25
3333 4618 1.741145 CACTTTATGTGGGGCGTTACC 59.259 52.381 0.00 0.00 42.68 2.85
3350 4635 9.531158 AGTAGACTTTATGGTAGTTAAGACACT 57.469 33.333 0.00 0.00 0.00 3.55
3363 4648 9.245962 CGGTCTGTAATTAAGTAGACTTTATGG 57.754 37.037 17.96 5.38 39.50 2.74
3364 4649 9.798994 ACGGTCTGTAATTAAGTAGACTTTATG 57.201 33.333 17.96 10.27 39.50 1.90
3366 4651 9.630098 CAACGGTCTGTAATTAAGTAGACTTTA 57.370 33.333 17.96 0.00 39.50 1.85
3367 4652 7.117379 GCAACGGTCTGTAATTAAGTAGACTTT 59.883 37.037 17.96 12.19 39.50 2.66
3368 4653 6.589139 GCAACGGTCTGTAATTAAGTAGACTT 59.411 38.462 17.96 0.00 39.50 3.01
3369 4654 6.098017 GCAACGGTCTGTAATTAAGTAGACT 58.902 40.000 17.96 4.76 39.50 3.24
3370 4655 5.865552 TGCAACGGTCTGTAATTAAGTAGAC 59.134 40.000 13.43 13.43 38.98 2.59
3371 4656 6.028146 TGCAACGGTCTGTAATTAAGTAGA 57.972 37.500 0.00 0.00 0.00 2.59
3372 4657 5.867716 ACTGCAACGGTCTGTAATTAAGTAG 59.132 40.000 0.00 0.00 0.00 2.57
3373 4658 5.786311 ACTGCAACGGTCTGTAATTAAGTA 58.214 37.500 0.00 0.00 0.00 2.24
3374 4659 4.638304 ACTGCAACGGTCTGTAATTAAGT 58.362 39.130 0.00 0.00 0.00 2.24
3375 4660 5.636121 TGTACTGCAACGGTCTGTAATTAAG 59.364 40.000 0.00 0.00 0.00 1.85
3376 4661 5.539979 TGTACTGCAACGGTCTGTAATTAA 58.460 37.500 0.00 0.00 0.00 1.40
3377 4662 5.047872 TCTGTACTGCAACGGTCTGTAATTA 60.048 40.000 0.00 0.00 0.00 1.40
3378 4663 3.994392 CTGTACTGCAACGGTCTGTAATT 59.006 43.478 0.00 0.00 0.00 1.40
3379 4664 3.257375 TCTGTACTGCAACGGTCTGTAAT 59.743 43.478 0.00 0.00 0.00 1.89
3380 4665 2.624364 TCTGTACTGCAACGGTCTGTAA 59.376 45.455 0.00 0.00 0.00 2.41
3381 4666 2.228103 CTCTGTACTGCAACGGTCTGTA 59.772 50.000 0.00 0.00 0.00 2.74
3382 4667 1.000163 CTCTGTACTGCAACGGTCTGT 60.000 52.381 0.00 0.00 0.00 3.41
3383 4668 1.000163 ACTCTGTACTGCAACGGTCTG 60.000 52.381 0.00 0.00 0.00 3.51
3384 4669 1.000163 CACTCTGTACTGCAACGGTCT 60.000 52.381 0.00 0.00 0.00 3.85
3385 4670 1.419374 CACTCTGTACTGCAACGGTC 58.581 55.000 0.00 0.00 0.00 4.79
3386 4671 0.600255 GCACTCTGTACTGCAACGGT 60.600 55.000 0.27 0.00 33.31 4.83
3387 4672 0.319900 AGCACTCTGTACTGCAACGG 60.320 55.000 7.48 0.00 35.73 4.44
3388 4673 1.457303 GAAGCACTCTGTACTGCAACG 59.543 52.381 7.48 0.00 35.73 4.10
3389 4674 2.760374 AGAAGCACTCTGTACTGCAAC 58.240 47.619 7.48 1.65 35.73 4.17
3390 4675 3.133691 CAAGAAGCACTCTGTACTGCAA 58.866 45.455 7.48 0.00 35.73 4.08
3391 4676 2.365293 TCAAGAAGCACTCTGTACTGCA 59.635 45.455 7.48 0.00 35.73 4.41
3392 4677 2.734079 GTCAAGAAGCACTCTGTACTGC 59.266 50.000 0.00 0.00 33.37 4.40
3393 4678 3.006323 AGGTCAAGAAGCACTCTGTACTG 59.994 47.826 0.00 0.00 33.37 2.74
3394 4679 3.235200 AGGTCAAGAAGCACTCTGTACT 58.765 45.455 0.00 0.00 33.37 2.73
3395 4680 3.669251 AGGTCAAGAAGCACTCTGTAC 57.331 47.619 0.00 0.00 33.37 2.90
3396 4681 3.898123 AGAAGGTCAAGAAGCACTCTGTA 59.102 43.478 0.00 0.00 33.37 2.74
3397 4682 2.703007 AGAAGGTCAAGAAGCACTCTGT 59.297 45.455 0.00 0.00 33.37 3.41
3398 4683 3.065655 CAGAAGGTCAAGAAGCACTCTG 58.934 50.000 0.00 0.00 33.37 3.35
3399 4684 2.038295 CCAGAAGGTCAAGAAGCACTCT 59.962 50.000 0.00 0.00 35.13 3.24
3400 4685 2.421619 CCAGAAGGTCAAGAAGCACTC 58.578 52.381 0.00 0.00 0.00 3.51
3401 4686 2.557920 CCAGAAGGTCAAGAAGCACT 57.442 50.000 0.00 0.00 0.00 4.40
3413 4698 0.244994 CTCACTCGACCACCAGAAGG 59.755 60.000 0.00 0.00 42.21 3.46
3414 4699 0.962489 ACTCACTCGACCACCAGAAG 59.038 55.000 0.00 0.00 0.00 2.85
3415 4700 0.959553 GACTCACTCGACCACCAGAA 59.040 55.000 0.00 0.00 0.00 3.02
3416 4701 0.110678 AGACTCACTCGACCACCAGA 59.889 55.000 0.00 0.00 0.00 3.86
3417 4702 0.962489 AAGACTCACTCGACCACCAG 59.038 55.000 0.00 0.00 0.00 4.00
3418 4703 0.959553 GAAGACTCACTCGACCACCA 59.040 55.000 0.00 0.00 0.00 4.17
3419 4704 0.959553 TGAAGACTCACTCGACCACC 59.040 55.000 0.00 0.00 0.00 4.61
3420 4705 2.600731 CATGAAGACTCACTCGACCAC 58.399 52.381 0.00 0.00 33.30 4.16
3421 4706 1.546029 CCATGAAGACTCACTCGACCA 59.454 52.381 0.00 0.00 33.30 4.02
3422 4707 1.546476 ACCATGAAGACTCACTCGACC 59.454 52.381 0.00 0.00 33.30 4.79
3423 4708 2.729467 CGACCATGAAGACTCACTCGAC 60.729 54.545 0.00 0.00 33.30 4.20
3424 4709 1.468914 CGACCATGAAGACTCACTCGA 59.531 52.381 0.00 0.00 33.30 4.04
3425 4710 1.468914 TCGACCATGAAGACTCACTCG 59.531 52.381 0.00 0.00 33.30 4.18
3426 4711 2.490115 ACTCGACCATGAAGACTCACTC 59.510 50.000 0.00 0.00 33.30 3.51
3427 4712 2.490115 GACTCGACCATGAAGACTCACT 59.510 50.000 0.00 0.00 33.30 3.41
3428 4713 2.416162 GGACTCGACCATGAAGACTCAC 60.416 54.545 0.00 0.00 33.30 3.51
3429 4714 1.819288 GGACTCGACCATGAAGACTCA 59.181 52.381 0.00 0.00 35.56 3.41
3430 4715 2.096248 AGGACTCGACCATGAAGACTC 58.904 52.381 0.00 0.00 0.00 3.36
3431 4716 2.223803 AGGACTCGACCATGAAGACT 57.776 50.000 0.00 0.00 0.00 3.24
3432 4717 2.231478 TGAAGGACTCGACCATGAAGAC 59.769 50.000 0.00 0.00 0.00 3.01
3433 4718 2.525368 TGAAGGACTCGACCATGAAGA 58.475 47.619 0.00 0.00 0.00 2.87
3434 4719 3.257393 CTTGAAGGACTCGACCATGAAG 58.743 50.000 0.00 0.00 0.00 3.02
3435 4720 2.632996 ACTTGAAGGACTCGACCATGAA 59.367 45.455 0.00 0.00 0.00 2.57
3436 4721 2.231478 GACTTGAAGGACTCGACCATGA 59.769 50.000 0.00 0.00 0.00 3.07
3437 4722 2.029020 TGACTTGAAGGACTCGACCATG 60.029 50.000 0.00 0.00 0.00 3.66
3438 4723 2.232452 CTGACTTGAAGGACTCGACCAT 59.768 50.000 0.00 0.00 0.00 3.55
3439 4724 1.613925 CTGACTTGAAGGACTCGACCA 59.386 52.381 0.00 0.00 0.00 4.02
3440 4725 1.614413 ACTGACTTGAAGGACTCGACC 59.386 52.381 0.00 0.00 0.00 4.79
3441 4726 2.666069 CGACTGACTTGAAGGACTCGAC 60.666 54.545 0.00 0.00 0.00 4.20
3442 4727 1.535896 CGACTGACTTGAAGGACTCGA 59.464 52.381 0.00 0.00 0.00 4.04
3443 4728 1.535896 TCGACTGACTTGAAGGACTCG 59.464 52.381 0.00 0.00 0.00 4.18
3444 4729 2.554893 ACTCGACTGACTTGAAGGACTC 59.445 50.000 0.00 0.00 0.00 3.36
3445 4730 2.294791 CACTCGACTGACTTGAAGGACT 59.705 50.000 0.00 0.00 0.00 3.85
3446 4731 2.608261 CCACTCGACTGACTTGAAGGAC 60.608 54.545 0.00 0.00 0.00 3.85
3447 4732 1.613925 CCACTCGACTGACTTGAAGGA 59.386 52.381 0.00 0.00 0.00 3.36
3448 4733 1.337260 CCCACTCGACTGACTTGAAGG 60.337 57.143 0.00 0.00 0.00 3.46
3449 4734 1.937108 GCCCACTCGACTGACTTGAAG 60.937 57.143 0.00 0.00 0.00 3.02
3450 4735 0.033504 GCCCACTCGACTGACTTGAA 59.966 55.000 0.00 0.00 0.00 2.69
3451 4736 0.827925 AGCCCACTCGACTGACTTGA 60.828 55.000 0.00 0.00 0.00 3.02
3452 4737 0.389166 GAGCCCACTCGACTGACTTG 60.389 60.000 0.00 0.00 32.04 3.16
3453 4738 1.536943 GGAGCCCACTCGACTGACTT 61.537 60.000 0.00 0.00 44.48 3.01
3454 4739 1.979693 GGAGCCCACTCGACTGACT 60.980 63.158 0.00 0.00 44.48 3.41
3455 4740 1.939769 GAGGAGCCCACTCGACTGAC 61.940 65.000 0.00 0.00 44.48 3.51
3456 4741 1.679305 GAGGAGCCCACTCGACTGA 60.679 63.158 0.00 0.00 44.48 3.41
3457 4742 2.888863 GAGGAGCCCACTCGACTG 59.111 66.667 0.00 0.00 44.48 3.51
3462 4747 0.456628 GACTTACGAGGAGCCCACTC 59.543 60.000 0.00 0.00 42.66 3.51
3463 4748 1.313812 CGACTTACGAGGAGCCCACT 61.314 60.000 0.00 0.00 45.77 4.00
3464 4749 1.139095 CGACTTACGAGGAGCCCAC 59.861 63.158 0.00 0.00 45.77 4.61
3465 4750 1.001764 TCGACTTACGAGGAGCCCA 60.002 57.895 0.00 0.00 46.45 5.36
3466 4751 3.915575 TCGACTTACGAGGAGCCC 58.084 61.111 0.00 0.00 46.45 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.