Multiple sequence alignment - TraesCS6B01G067400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G067400 chr6B 100.000 3863 0 0 1 3863 45550863 45554725 0.000000e+00 7134.0
1 TraesCS6B01G067400 chr6B 75.063 1199 218 55 1005 2148 51507045 51505873 2.090000e-132 483.0
2 TraesCS6B01G067400 chr6B 74.811 1191 239 43 1028 2173 51423449 51422275 7.510000e-132 481.0
3 TraesCS6B01G067400 chr6B 73.376 939 180 45 1036 1918 78591076 78592000 6.320000e-73 285.0
4 TraesCS6B01G067400 chr6B 95.726 117 5 0 2528 2644 694401058 694401174 5.090000e-44 189.0
5 TraesCS6B01G067400 chr6B 95.614 114 5 0 2535 2648 286605775 286605888 2.370000e-42 183.0
6 TraesCS6B01G067400 chr6B 79.621 211 30 6 3206 3415 51440186 51439988 5.200000e-29 139.0
7 TraesCS6B01G067400 chr6B 95.556 45 2 0 1360 1404 63365586 63365630 5.350000e-09 73.1
8 TraesCS6B01G067400 chrUn 91.074 1714 80 35 848 2538 95016176 95017839 0.000000e+00 2250.0
9 TraesCS6B01G067400 chrUn 90.326 827 47 9 2972 3790 95018119 95018920 0.000000e+00 1053.0
10 TraesCS6B01G067400 chrUn 91.645 754 48 5 111 852 95015383 95016133 0.000000e+00 1029.0
11 TraesCS6B01G067400 chrUn 96.786 280 9 0 2643 2922 95017840 95018119 5.840000e-128 468.0
12 TraesCS6B01G067400 chrUn 77.778 432 72 17 1008 1422 26698168 26697744 1.070000e-60 244.0
13 TraesCS6B01G067400 chrUn 76.415 424 71 24 999 1400 102515883 102515467 6.540000e-48 202.0
14 TraesCS6B01G067400 chrUn 92.063 126 9 1 2535 2660 27987410 27987534 3.970000e-40 176.0
15 TraesCS6B01G067400 chr6A 92.297 688 48 4 111 795 26567057 26567742 0.000000e+00 972.0
16 TraesCS6B01G067400 chr6A 89.765 469 39 5 1244 1709 26568882 26569344 3.320000e-165 592.0
17 TraesCS6B01G067400 chr6A 75.261 1148 217 42 1014 2117 30455117 30456241 5.800000e-133 484.0
18 TraesCS6B01G067400 chr6A 80.446 583 84 17 999 1557 30897278 30896702 5.970000e-113 418.0
19 TraesCS6B01G067400 chr6A 91.667 240 11 1 1720 1950 26570535 26570774 1.340000e-84 324.0
20 TraesCS6B01G067400 chr6A 75.962 416 70 23 1004 1400 34555108 34555512 1.830000e-43 187.0
21 TraesCS6B01G067400 chr6A 75.462 379 67 22 1071 1431 30283398 30283028 1.110000e-35 161.0
22 TraesCS6B01G067400 chr6A 80.095 211 29 6 3206 3415 30421184 30421382 1.120000e-30 145.0
23 TraesCS6B01G067400 chr6A 93.671 79 3 2 2 78 559501174 559501252 2.440000e-22 117.0
24 TraesCS6B01G067400 chr6A 100.000 34 0 0 2045 2078 26570775 26570808 3.220000e-06 63.9
25 TraesCS6B01G067400 chr6D 74.823 1128 222 47 1032 2120 27666693 27665589 1.640000e-123 453.0
26 TraesCS6B01G067400 chr6D 80.788 203 24 7 3206 3407 27706662 27706474 1.120000e-30 145.0
27 TraesCS6B01G067400 chr6D 75.391 256 44 14 2759 3001 15175434 15175185 5.280000e-19 106.0
28 TraesCS6B01G067400 chr5B 96.460 113 4 0 2534 2646 512985325 512985213 1.830000e-43 187.0
29 TraesCS6B01G067400 chr5B 94.915 118 5 1 2535 2651 145479144 145479261 2.370000e-42 183.0
30 TraesCS6B01G067400 chr4B 95.000 120 5 1 2532 2651 565865850 565865968 1.830000e-43 187.0
31 TraesCS6B01G067400 chr3B 96.460 113 4 0 2535 2647 217575095 217574983 1.830000e-43 187.0
32 TraesCS6B01G067400 chr3B 94.118 119 7 0 2533 2651 48886467 48886585 8.530000e-42 182.0
33 TraesCS6B01G067400 chr5D 95.614 114 5 0 2535 2648 555096 554983 2.370000e-42 183.0
34 TraesCS6B01G067400 chr2B 92.857 112 6 2 1 110 100853781 100853892 1.110000e-35 161.0
35 TraesCS6B01G067400 chr4D 91.818 110 8 1 2 111 35794026 35793918 6.680000e-33 152.0
36 TraesCS6B01G067400 chr1B 97.260 73 2 0 2 74 659520294 659520366 1.460000e-24 124.0
37 TraesCS6B01G067400 chr3A 98.039 51 1 0 2 52 6790664 6790714 5.320000e-14 89.8
38 TraesCS6B01G067400 chr5A 86.765 68 9 0 1362 1429 606153865 606153932 4.140000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G067400 chr6B 45550863 45554725 3862 False 7134.000 7134 100.00000 1 3863 1 chr6B.!!$F1 3862
1 TraesCS6B01G067400 chr6B 51505873 51507045 1172 True 483.000 483 75.06300 1005 2148 1 chr6B.!!$R3 1143
2 TraesCS6B01G067400 chr6B 51422275 51423449 1174 True 481.000 481 74.81100 1028 2173 1 chr6B.!!$R1 1145
3 TraesCS6B01G067400 chr6B 78591076 78592000 924 False 285.000 285 73.37600 1036 1918 1 chr6B.!!$F3 882
4 TraesCS6B01G067400 chrUn 95015383 95018920 3537 False 1200.000 2250 92.45775 111 3790 4 chrUn.!!$F2 3679
5 TraesCS6B01G067400 chr6A 26567057 26570808 3751 False 487.975 972 93.43225 111 2078 4 chr6A.!!$F5 1967
6 TraesCS6B01G067400 chr6A 30455117 30456241 1124 False 484.000 484 75.26100 1014 2117 1 chr6A.!!$F2 1103
7 TraesCS6B01G067400 chr6A 30896702 30897278 576 True 418.000 418 80.44600 999 1557 1 chr6A.!!$R2 558
8 TraesCS6B01G067400 chr6D 27665589 27666693 1104 True 453.000 453 74.82300 1032 2120 1 chr6D.!!$R2 1088

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
911 1753 0.464554 GGCCCTCTACATTGCACCTC 60.465 60.0 0.00 0.0 0.00 3.85 F
1614 2512 0.034616 AGGCTTCCATGAGCTATCGC 59.965 55.0 6.38 0.0 42.32 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2194 4314 0.036732 TTGGCATCCTGTCCAGTGTC 59.963 55.0 0.0 0.0 33.32 3.67 R
3583 5711 0.104487 TGCACAACACAAGCAATGGG 59.896 50.0 0.0 0.0 38.89 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 8.916628 ATGGTTACAAAATTTTGGTGCTTATT 57.083 26.923 29.37 12.33 42.34 1.40
69 70 8.147642 TGGTTACAAAATTTTGGTGCTTATTG 57.852 30.769 29.37 6.73 42.34 1.90
70 71 7.770897 TGGTTACAAAATTTTGGTGCTTATTGT 59.229 29.630 29.37 11.79 42.34 2.71
71 72 8.616942 GGTTACAAAATTTTGGTGCTTATTGTT 58.383 29.630 29.37 10.65 42.34 2.83
72 73 9.644993 GTTACAAAATTTTGGTGCTTATTGTTC 57.355 29.630 29.37 4.42 42.34 3.18
73 74 9.606631 TTACAAAATTTTGGTGCTTATTGTTCT 57.393 25.926 29.37 10.10 42.34 3.01
74 75 8.504812 ACAAAATTTTGGTGCTTATTGTTCTT 57.495 26.923 29.37 5.06 42.34 2.52
75 76 8.397148 ACAAAATTTTGGTGCTTATTGTTCTTG 58.603 29.630 29.37 4.41 42.34 3.02
76 77 6.544038 AATTTTGGTGCTTATTGTTCTTGC 57.456 33.333 0.00 0.00 0.00 4.01
77 78 3.658757 TTGGTGCTTATTGTTCTTGCC 57.341 42.857 0.00 0.00 0.00 4.52
78 79 1.892474 TGGTGCTTATTGTTCTTGCCC 59.108 47.619 0.00 0.00 0.00 5.36
79 80 1.204704 GGTGCTTATTGTTCTTGCCCC 59.795 52.381 0.00 0.00 0.00 5.80
80 81 1.204704 GTGCTTATTGTTCTTGCCCCC 59.795 52.381 0.00 0.00 0.00 5.40
97 98 1.609208 CCCCCTATTGCCGATTTCTG 58.391 55.000 0.00 0.00 0.00 3.02
98 99 1.609208 CCCCTATTGCCGATTTCTGG 58.391 55.000 0.00 0.00 0.00 3.86
99 100 1.133792 CCCCTATTGCCGATTTCTGGT 60.134 52.381 0.00 0.00 0.00 4.00
100 101 2.654863 CCCTATTGCCGATTTCTGGTT 58.345 47.619 0.00 0.00 0.00 3.67
101 102 3.023832 CCCTATTGCCGATTTCTGGTTT 58.976 45.455 0.00 0.00 0.00 3.27
102 103 3.066760 CCCTATTGCCGATTTCTGGTTTC 59.933 47.826 0.00 0.00 0.00 2.78
103 104 3.066760 CCTATTGCCGATTTCTGGTTTCC 59.933 47.826 0.00 0.00 0.00 3.13
104 105 2.286365 TTGCCGATTTCTGGTTTCCT 57.714 45.000 0.00 0.00 0.00 3.36
105 106 1.821216 TGCCGATTTCTGGTTTCCTC 58.179 50.000 0.00 0.00 0.00 3.71
106 107 1.095600 GCCGATTTCTGGTTTCCTCC 58.904 55.000 0.00 0.00 0.00 4.30
107 108 1.751437 CCGATTTCTGGTTTCCTCCC 58.249 55.000 0.00 0.00 0.00 4.30
108 109 1.282157 CCGATTTCTGGTTTCCTCCCT 59.718 52.381 0.00 0.00 0.00 4.20
109 110 2.359900 CGATTTCTGGTTTCCTCCCTG 58.640 52.381 0.00 0.00 0.00 4.45
164 165 3.880490 TGCGAGTTTCCATACAACAAGTT 59.120 39.130 0.00 0.00 0.00 2.66
267 268 4.293648 GTGGGGTTTTGGCCACGC 62.294 66.667 3.88 2.41 33.77 5.34
342 343 3.088532 CACTAGCTCTCTTGTGAGGACT 58.911 50.000 0.00 0.00 44.95 3.85
345 346 1.077005 AGCTCTCTTGTGAGGACTCCT 59.923 52.381 0.00 0.00 40.58 3.69
440 442 2.849942 TGATGGGCATGGTTATCTTCG 58.150 47.619 0.00 0.00 0.00 3.79
455 457 2.888594 TCTTCGAATGCCTAACCTTCG 58.111 47.619 0.00 0.00 42.24 3.79
506 508 5.410924 TCGAGTTAGTGAATTCATGACTGG 58.589 41.667 19.55 18.21 0.00 4.00
528 530 1.501582 AGTTCAGCTATGGAGGACCC 58.498 55.000 0.00 0.00 34.81 4.46
550 552 4.812626 CCGGTGGATGTGTTAATTAGTACC 59.187 45.833 0.00 0.00 0.00 3.34
606 609 4.619760 TGCAAGTTTCGTCTTACTATGTCG 59.380 41.667 0.00 0.00 0.00 4.35
618 621 6.413235 GTCTTACTATGTCGTTCCGTGAATAC 59.587 42.308 0.00 0.00 0.00 1.89
643 646 8.255206 ACGGACTAAATAAATGTCATACACTCA 58.745 33.333 0.00 0.00 32.84 3.41
668 671 2.734606 TCGAACCGACATGACATTTCAC 59.265 45.455 0.00 0.00 33.38 3.18
669 672 2.472235 CGAACCGACATGACATTTCACG 60.472 50.000 0.00 0.00 33.38 4.35
719 731 5.122082 CGAATATACTACTCCCTCCGTTCTC 59.878 48.000 0.00 0.00 0.00 2.87
732 744 6.720288 TCCCTCCGTTCTCTTATAAGATAAGG 59.280 42.308 15.47 17.62 33.93 2.69
742 754 9.561069 TCTCTTATAAGATAAGGCATTTTGGAC 57.439 33.333 15.47 0.00 33.93 4.02
765 777 4.391523 CAGTTGGTTTTGAACTGTTTTGGG 59.608 41.667 0.00 0.00 43.55 4.12
766 778 4.041075 AGTTGGTTTTGAACTGTTTTGGGT 59.959 37.500 0.00 0.00 32.30 4.51
781 793 3.500448 TTGGGTGCTGTCTGAATTGTA 57.500 42.857 0.00 0.00 0.00 2.41
814 1609 9.053472 TCTTATAAAAGGGAACAGAGGATGTAA 57.947 33.333 0.00 0.00 35.65 2.41
830 1626 7.177392 AGAGGATGTAAAAATCAAAGAAGTGGG 59.823 37.037 0.00 0.00 0.00 4.61
840 1636 3.766591 TCAAAGAAGTGGGCTGAAACAAA 59.233 39.130 0.00 0.00 0.00 2.83
841 1637 4.221703 TCAAAGAAGTGGGCTGAAACAAAA 59.778 37.500 0.00 0.00 0.00 2.44
843 1639 5.357742 AAGAAGTGGGCTGAAACAAAAAT 57.642 34.783 0.00 0.00 0.00 1.82
846 1642 4.751767 AGTGGGCTGAAACAAAAATGAA 57.248 36.364 0.00 0.00 0.00 2.57
847 1643 4.696455 AGTGGGCTGAAACAAAAATGAAG 58.304 39.130 0.00 0.00 0.00 3.02
848 1644 4.405358 AGTGGGCTGAAACAAAAATGAAGA 59.595 37.500 0.00 0.00 0.00 2.87
849 1645 4.507756 GTGGGCTGAAACAAAAATGAAGAC 59.492 41.667 0.00 0.00 0.00 3.01
850 1646 4.405358 TGGGCTGAAACAAAAATGAAGACT 59.595 37.500 0.00 0.00 0.00 3.24
851 1647 4.984785 GGGCTGAAACAAAAATGAAGACTC 59.015 41.667 0.00 0.00 0.00 3.36
852 1648 4.984785 GGCTGAAACAAAAATGAAGACTCC 59.015 41.667 0.00 0.00 0.00 3.85
854 1650 5.529581 TGAAACAAAAATGAAGACTCCCC 57.470 39.130 0.00 0.00 0.00 4.81
855 1651 4.959210 TGAAACAAAAATGAAGACTCCCCA 59.041 37.500 0.00 0.00 0.00 4.96
857 1653 4.937201 ACAAAAATGAAGACTCCCCAAC 57.063 40.909 0.00 0.00 0.00 3.77
858 1654 4.285863 ACAAAAATGAAGACTCCCCAACA 58.714 39.130 0.00 0.00 0.00 3.33
860 1656 5.221501 ACAAAAATGAAGACTCCCCAACATG 60.222 40.000 0.00 0.00 0.00 3.21
911 1753 0.464554 GGCCCTCTACATTGCACCTC 60.465 60.000 0.00 0.00 0.00 3.85
946 1788 1.518572 CCGCATCGTGTGGTACCTC 60.519 63.158 14.36 10.53 42.85 3.85
1475 2347 4.269523 TTCTGCTGCCGGCCACTT 62.270 61.111 26.77 0.00 40.92 3.16
1476 2348 3.790416 TTCTGCTGCCGGCCACTTT 62.790 57.895 26.77 0.00 40.92 2.66
1479 2360 3.741476 GCTGCCGGCCACTTTCAG 61.741 66.667 26.77 14.04 34.27 3.02
1587 2476 2.179517 CTCGTCTCCACACCGCTC 59.820 66.667 0.00 0.00 0.00 5.03
1590 2479 2.997897 GTCTCCACACCGCTCCCT 60.998 66.667 0.00 0.00 0.00 4.20
1602 2500 3.002371 CTCCCTCCCAAGGCTTCC 58.998 66.667 0.00 0.00 41.85 3.46
1614 2512 0.034616 AGGCTTCCATGAGCTATCGC 59.965 55.000 6.38 0.00 42.32 4.58
1909 4006 5.945784 AGTATTGAATTGGACAAGCTGCTTA 59.054 36.000 15.51 0.00 0.00 3.09
1967 4064 2.436115 GGGGTTCGCCGAGGAAAG 60.436 66.667 0.00 0.00 38.45 2.62
2017 4114 0.319900 TGTCTTCACGCTCCAGCTTC 60.320 55.000 0.00 0.00 39.32 3.86
2019 4116 0.037882 TCTTCACGCTCCAGCTTCAG 60.038 55.000 0.00 0.00 39.32 3.02
2033 4130 1.467734 GCTTCAGTCATTGCACTCCAG 59.532 52.381 0.00 0.00 0.00 3.86
2040 4137 2.485814 GTCATTGCACTCCAGGAAACTC 59.514 50.000 0.00 0.00 40.21 3.01
2102 4208 4.163649 AGGGGTCTATACTGCAGGTAAAAC 59.836 45.833 19.93 10.19 33.74 2.43
2184 4304 6.712547 GGTAGCAAGCATCTTATCTGGTTATT 59.287 38.462 0.00 0.00 33.32 1.40
2185 4305 7.878127 GGTAGCAAGCATCTTATCTGGTTATTA 59.122 37.037 0.00 0.00 33.32 0.98
2186 4306 9.273016 GTAGCAAGCATCTTATCTGGTTATTAA 57.727 33.333 0.00 0.00 33.32 1.40
2187 4307 8.930846 AGCAAGCATCTTATCTGGTTATTAAT 57.069 30.769 0.00 0.00 33.32 1.40
2188 4308 9.359653 AGCAAGCATCTTATCTGGTTATTAATT 57.640 29.630 0.00 0.00 33.32 1.40
2203 4323 9.787435 TGGTTATTAATTATATGGACACTGGAC 57.213 33.333 0.00 0.00 0.00 4.02
2204 4324 9.787435 GGTTATTAATTATATGGACACTGGACA 57.213 33.333 0.00 0.00 0.00 4.02
2207 4327 7.684317 TTAATTATATGGACACTGGACAGGA 57.316 36.000 4.14 0.00 0.00 3.86
2208 4328 6.770286 AATTATATGGACACTGGACAGGAT 57.230 37.500 4.14 0.00 0.00 3.24
2209 4329 5.551305 TTATATGGACACTGGACAGGATG 57.449 43.478 4.14 0.00 46.00 3.51
2210 4330 0.254178 ATGGACACTGGACAGGATGC 59.746 55.000 4.14 0.00 42.53 3.91
2211 4331 1.078143 GGACACTGGACAGGATGCC 60.078 63.158 4.14 0.00 42.53 4.40
2222 4342 5.376625 TGGACAGGATGCCAATAGAATAAC 58.623 41.667 0.00 0.00 42.53 1.89
2224 4344 5.827797 GGACAGGATGCCAATAGAATAACAA 59.172 40.000 0.00 0.00 42.53 2.83
2233 4353 7.081349 TGCCAATAGAATAACAAAACGAACAG 58.919 34.615 0.00 0.00 0.00 3.16
2234 4354 6.033513 GCCAATAGAATAACAAAACGAACAGC 59.966 38.462 0.00 0.00 0.00 4.40
2241 4361 7.591426 AGAATAACAAAACGAACAGCAAGATTC 59.409 33.333 0.00 0.00 0.00 2.52
2264 4384 8.918202 TTCGCAGAAATAATATATTGGAGGTT 57.082 30.769 8.28 0.00 45.90 3.50
2274 4394 6.906157 ATATATTGGAGGTTGATTGGCAAG 57.094 37.500 5.96 0.00 37.12 4.01
2384 4504 9.770097 CTTGCTTGGAGACAGATCTATATAAAA 57.230 33.333 0.00 0.00 44.54 1.52
2416 4536 8.783093 TCCACACTTTCAATTAGTATGTTTGAG 58.217 33.333 0.00 0.00 31.54 3.02
2538 4658 6.099125 TGGGCTATTCTTTGTGCTGTATAGTA 59.901 38.462 0.00 0.00 0.00 1.82
2539 4659 6.424207 GGGCTATTCTTTGTGCTGTATAGTAC 59.576 42.308 0.65 0.65 39.64 2.73
2540 4660 7.210873 GGCTATTCTTTGTGCTGTATAGTACT 58.789 38.462 9.01 0.00 39.87 2.73
2541 4661 7.382759 GGCTATTCTTTGTGCTGTATAGTACTC 59.617 40.741 0.00 0.00 39.87 2.59
2542 4662 7.382759 GCTATTCTTTGTGCTGTATAGTACTCC 59.617 40.741 0.00 0.00 39.87 3.85
2543 4663 5.593679 TCTTTGTGCTGTATAGTACTCCC 57.406 43.478 0.00 0.00 39.87 4.30
2544 4664 5.269991 TCTTTGTGCTGTATAGTACTCCCT 58.730 41.667 0.00 0.00 39.87 4.20
2545 4665 5.360144 TCTTTGTGCTGTATAGTACTCCCTC 59.640 44.000 0.00 0.00 39.87 4.30
2546 4666 4.521536 TGTGCTGTATAGTACTCCCTCT 57.478 45.455 0.00 0.00 39.87 3.69
2547 4667 4.207955 TGTGCTGTATAGTACTCCCTCTG 58.792 47.826 0.00 0.00 39.87 3.35
2548 4668 4.208746 GTGCTGTATAGTACTCCCTCTGT 58.791 47.826 0.00 0.00 36.70 3.41
2549 4669 4.645588 GTGCTGTATAGTACTCCCTCTGTT 59.354 45.833 0.00 0.00 36.70 3.16
2550 4670 4.888239 TGCTGTATAGTACTCCCTCTGTTC 59.112 45.833 0.00 0.00 0.00 3.18
2551 4671 4.278919 GCTGTATAGTACTCCCTCTGTTCC 59.721 50.000 0.00 0.00 0.00 3.62
2552 4672 5.446860 CTGTATAGTACTCCCTCTGTTCCA 58.553 45.833 0.00 0.00 0.00 3.53
2553 4673 5.834460 TGTATAGTACTCCCTCTGTTCCAA 58.166 41.667 0.00 0.00 0.00 3.53
2554 4674 6.258354 TGTATAGTACTCCCTCTGTTCCAAA 58.742 40.000 0.00 0.00 0.00 3.28
2555 4675 6.901300 TGTATAGTACTCCCTCTGTTCCAAAT 59.099 38.462 0.00 0.00 0.00 2.32
2556 4676 6.893020 ATAGTACTCCCTCTGTTCCAAATT 57.107 37.500 0.00 0.00 0.00 1.82
2557 4677 7.989947 ATAGTACTCCCTCTGTTCCAAATTA 57.010 36.000 0.00 0.00 0.00 1.40
2558 4678 6.051179 AGTACTCCCTCTGTTCCAAATTAC 57.949 41.667 0.00 0.00 0.00 1.89
2559 4679 5.785940 AGTACTCCCTCTGTTCCAAATTACT 59.214 40.000 0.00 0.00 0.00 2.24
2560 4680 5.167303 ACTCCCTCTGTTCCAAATTACTC 57.833 43.478 0.00 0.00 0.00 2.59
2561 4681 4.184629 CTCCCTCTGTTCCAAATTACTCG 58.815 47.826 0.00 0.00 0.00 4.18
2562 4682 3.581332 TCCCTCTGTTCCAAATTACTCGT 59.419 43.478 0.00 0.00 0.00 4.18
2563 4683 3.933332 CCCTCTGTTCCAAATTACTCGTC 59.067 47.826 0.00 0.00 0.00 4.20
2564 4684 3.612860 CCTCTGTTCCAAATTACTCGTCG 59.387 47.826 0.00 0.00 0.00 5.12
2565 4685 2.991190 TCTGTTCCAAATTACTCGTCGC 59.009 45.455 0.00 0.00 0.00 5.19
2566 4686 2.993899 CTGTTCCAAATTACTCGTCGCT 59.006 45.455 0.00 0.00 0.00 4.93
2567 4687 2.734606 TGTTCCAAATTACTCGTCGCTG 59.265 45.455 0.00 0.00 0.00 5.18
2568 4688 2.991190 GTTCCAAATTACTCGTCGCTGA 59.009 45.455 0.00 0.00 0.00 4.26
2569 4689 3.306917 TCCAAATTACTCGTCGCTGAA 57.693 42.857 0.00 0.00 0.00 3.02
2570 4690 3.655486 TCCAAATTACTCGTCGCTGAAA 58.345 40.909 0.00 0.00 0.00 2.69
2571 4691 4.250464 TCCAAATTACTCGTCGCTGAAAT 58.750 39.130 0.00 0.00 0.00 2.17
2572 4692 4.092821 TCCAAATTACTCGTCGCTGAAATG 59.907 41.667 0.00 0.00 0.00 2.32
2573 4693 4.334443 CAAATTACTCGTCGCTGAAATGG 58.666 43.478 0.00 0.00 0.00 3.16
2574 4694 3.520290 ATTACTCGTCGCTGAAATGGA 57.480 42.857 0.00 0.00 0.00 3.41
2575 4695 3.520290 TTACTCGTCGCTGAAATGGAT 57.480 42.857 0.00 0.00 0.00 3.41
2576 4696 1.645034 ACTCGTCGCTGAAATGGATG 58.355 50.000 0.00 0.00 0.00 3.51
2577 4697 1.066858 ACTCGTCGCTGAAATGGATGT 60.067 47.619 0.00 0.00 0.00 3.06
2578 4698 2.165641 ACTCGTCGCTGAAATGGATGTA 59.834 45.455 0.00 0.00 0.00 2.29
2579 4699 3.181475 ACTCGTCGCTGAAATGGATGTAT 60.181 43.478 0.00 0.00 0.00 2.29
2580 4700 3.381045 TCGTCGCTGAAATGGATGTATC 58.619 45.455 0.00 0.00 0.00 2.24
2581 4701 3.068165 TCGTCGCTGAAATGGATGTATCT 59.932 43.478 0.00 0.00 0.00 1.98
2582 4702 4.277423 TCGTCGCTGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 0.00 1.98
2583 4703 4.618912 CGTCGCTGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 0.00 2.43
2584 4704 5.562890 CGTCGCTGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 0.00 2.43
2585 4705 6.216569 GTCGCTGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 0.00 2.10
2586 4706 6.144724 GTCGCTGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 0.00 3.01
2587 4707 6.040955 TCGCTGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
2588 4708 7.230712 TCGCTGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
2589 4709 7.867909 CGCTGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
2590 4710 9.547753 GCTGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
2618 4738 8.738645 ACATCTAGATACATCTATATGTGCGA 57.261 34.615 20.74 6.89 46.50 5.10
2619 4739 8.616942 ACATCTAGATACATCTATATGTGCGAC 58.383 37.037 20.74 0.00 46.50 5.19
2620 4740 8.616076 CATCTAGATACATCTATATGTGCGACA 58.384 37.037 4.54 0.00 45.99 4.35
2621 4741 8.561738 TCTAGATACATCTATATGTGCGACAA 57.438 34.615 4.09 0.00 45.99 3.18
2622 4742 8.669243 TCTAGATACATCTATATGTGCGACAAG 58.331 37.037 4.09 0.00 45.99 3.16
2623 4743 7.220741 AGATACATCTATATGTGCGACAAGT 57.779 36.000 4.09 0.00 45.99 3.16
2624 4744 8.336801 AGATACATCTATATGTGCGACAAGTA 57.663 34.615 4.09 0.00 45.99 2.24
2625 4745 8.793592 AGATACATCTATATGTGCGACAAGTAA 58.206 33.333 4.09 0.00 45.99 2.24
2626 4746 9.574458 GATACATCTATATGTGCGACAAGTAAT 57.426 33.333 4.09 0.00 45.99 1.89
2627 4747 9.929180 ATACATCTATATGTGCGACAAGTAATT 57.071 29.630 4.09 0.00 45.99 1.40
2628 4748 8.299262 ACATCTATATGTGCGACAAGTAATTC 57.701 34.615 0.00 0.00 44.79 2.17
2629 4749 6.986424 TCTATATGTGCGACAAGTAATTCG 57.014 37.500 0.00 0.00 38.31 3.34
2630 4750 5.918576 TCTATATGTGCGACAAGTAATTCGG 59.081 40.000 0.00 0.00 35.73 4.30
2631 4751 2.442212 TGTGCGACAAGTAATTCGGA 57.558 45.000 0.00 0.00 35.73 4.55
2632 4752 2.756829 TGTGCGACAAGTAATTCGGAA 58.243 42.857 0.00 0.00 37.32 4.30
2633 4753 3.331150 TGTGCGACAAGTAATTCGGAAT 58.669 40.909 0.00 0.00 37.32 3.01
2634 4754 3.124466 TGTGCGACAAGTAATTCGGAATG 59.876 43.478 3.59 0.00 37.32 2.67
2635 4755 2.675844 TGCGACAAGTAATTCGGAATGG 59.324 45.455 3.59 0.00 35.73 3.16
2636 4756 2.933906 GCGACAAGTAATTCGGAATGGA 59.066 45.455 3.59 0.00 35.73 3.41
2637 4757 3.001330 GCGACAAGTAATTCGGAATGGAG 59.999 47.826 3.59 0.00 35.73 3.86
2638 4758 3.555956 CGACAAGTAATTCGGAATGGAGG 59.444 47.826 3.59 0.00 0.00 4.30
2639 4759 3.877508 GACAAGTAATTCGGAATGGAGGG 59.122 47.826 3.59 0.00 0.00 4.30
2640 4760 3.521937 ACAAGTAATTCGGAATGGAGGGA 59.478 43.478 3.59 0.00 0.00 4.20
2641 4761 4.130118 CAAGTAATTCGGAATGGAGGGAG 58.870 47.826 3.59 0.00 0.00 4.30
2653 4773 5.659079 GGAATGGAGGGAGTAGTAGATATGG 59.341 48.000 0.00 0.00 0.00 2.74
2765 4885 2.213499 CGCCCTCACATCTATTTGACC 58.787 52.381 0.00 0.00 0.00 4.02
2768 4888 3.198068 CCCTCACATCTATTTGACCGTG 58.802 50.000 0.00 0.00 34.51 4.94
2793 4913 6.319658 GCCTTAGAATCTCATTGGTTCATTGA 59.680 38.462 0.00 0.00 0.00 2.57
2806 4926 8.918658 CATTGGTTCATTGACTTCTTATTGTTG 58.081 33.333 0.00 0.00 0.00 3.33
2829 4949 0.473755 ATGCGGATATTGGTGCTGGA 59.526 50.000 0.00 0.00 0.00 3.86
2830 4950 0.179048 TGCGGATATTGGTGCTGGAG 60.179 55.000 0.00 0.00 0.00 3.86
2878 4998 8.579006 ACAATACATAATATGATTTGCCCAGTG 58.421 33.333 7.33 0.00 32.75 3.66
2907 5027 3.959495 ATGAGTTGATTGGGCAGGTAT 57.041 42.857 0.00 0.00 0.00 2.73
2921 5041 6.986391 TGGGCAGGTATCTATATATCTGTCT 58.014 40.000 11.49 0.00 46.44 3.41
2922 5042 6.836007 TGGGCAGGTATCTATATATCTGTCTG 59.164 42.308 11.49 0.00 46.44 3.51
2923 5043 6.836527 GGGCAGGTATCTATATATCTGTCTGT 59.163 42.308 11.49 0.00 46.44 3.41
2924 5044 7.999545 GGGCAGGTATCTATATATCTGTCTGTA 59.000 40.741 11.49 0.00 46.44 2.74
2925 5045 9.062524 GGCAGGTATCTATATATCTGTCTGTAG 57.937 40.741 9.44 0.00 44.65 2.74
2926 5046 9.621629 GCAGGTATCTATATATCTGTCTGTAGT 57.378 37.037 9.44 0.00 45.20 2.73
2938 5058 9.890629 ATATCTGTCTGTAGTAGCAAAATGAAA 57.109 29.630 0.00 0.00 0.00 2.69
2939 5059 8.798859 ATCTGTCTGTAGTAGCAAAATGAAAT 57.201 30.769 0.00 0.00 0.00 2.17
2940 5060 8.032952 TCTGTCTGTAGTAGCAAAATGAAATG 57.967 34.615 0.00 0.00 0.00 2.32
2941 5061 7.661437 TCTGTCTGTAGTAGCAAAATGAAATGT 59.339 33.333 0.00 0.00 0.00 2.71
2942 5062 8.165239 TGTCTGTAGTAGCAAAATGAAATGTT 57.835 30.769 0.00 0.00 0.00 2.71
2943 5063 8.629158 TGTCTGTAGTAGCAAAATGAAATGTTT 58.371 29.630 0.00 0.00 0.00 2.83
2944 5064 9.463443 GTCTGTAGTAGCAAAATGAAATGTTTT 57.537 29.630 0.00 0.00 0.00 2.43
2950 5070 8.337532 AGTAGCAAAATGAAATGTTTTTCTTGC 58.662 29.630 12.34 12.34 43.66 4.01
2951 5071 6.497437 AGCAAAATGAAATGTTTTTCTTGCC 58.503 32.000 14.82 4.33 44.00 4.52
2952 5072 5.686841 GCAAAATGAAATGTTTTTCTTGCCC 59.313 36.000 10.42 0.00 40.78 5.36
2953 5073 6.679884 GCAAAATGAAATGTTTTTCTTGCCCA 60.680 34.615 10.42 0.00 40.78 5.36
2954 5074 7.427214 CAAAATGAAATGTTTTTCTTGCCCAT 58.573 30.769 0.75 0.00 41.54 4.00
2955 5075 7.585579 AAATGAAATGTTTTTCTTGCCCATT 57.414 28.000 0.75 0.00 41.54 3.16
2956 5076 6.806388 ATGAAATGTTTTTCTTGCCCATTC 57.194 33.333 0.75 0.00 41.54 2.67
2957 5077 5.678583 TGAAATGTTTTTCTTGCCCATTCA 58.321 33.333 0.75 0.00 41.54 2.57
2958 5078 6.118170 TGAAATGTTTTTCTTGCCCATTCAA 58.882 32.000 0.75 0.00 41.54 2.69
2959 5079 6.038050 TGAAATGTTTTTCTTGCCCATTCAAC 59.962 34.615 0.75 0.00 41.54 3.18
2960 5080 3.452474 TGTTTTTCTTGCCCATTCAACG 58.548 40.909 0.00 0.00 0.00 4.10
2961 5081 2.799978 GTTTTTCTTGCCCATTCAACGG 59.200 45.455 0.00 0.00 0.00 4.44
2962 5082 1.698506 TTTCTTGCCCATTCAACGGT 58.301 45.000 0.00 0.00 0.00 4.83
2963 5083 2.570415 TTCTTGCCCATTCAACGGTA 57.430 45.000 0.00 0.00 0.00 4.02
2964 5084 1.816074 TCTTGCCCATTCAACGGTAC 58.184 50.000 0.00 0.00 0.00 3.34
2965 5085 1.349688 TCTTGCCCATTCAACGGTACT 59.650 47.619 0.00 0.00 0.00 2.73
2966 5086 2.159382 CTTGCCCATTCAACGGTACTT 58.841 47.619 0.00 0.00 0.00 2.24
2967 5087 2.279935 TGCCCATTCAACGGTACTTT 57.720 45.000 0.00 0.00 0.00 2.66
2968 5088 2.588620 TGCCCATTCAACGGTACTTTT 58.411 42.857 0.00 0.00 0.00 2.27
2969 5089 2.959707 TGCCCATTCAACGGTACTTTTT 59.040 40.909 0.00 0.00 0.00 1.94
2970 5090 3.243569 TGCCCATTCAACGGTACTTTTTG 60.244 43.478 0.00 0.00 0.00 2.44
2976 5096 7.654116 CCCATTCAACGGTACTTTTTGTTTTAT 59.346 33.333 0.00 0.00 0.00 1.40
3004 5124 5.352569 TGCTAGTTGCTAGATTGCTTTCTTC 59.647 40.000 7.30 0.00 43.37 2.87
3040 5160 2.548480 GGGTCTTTCAAGTTTGAGGACG 59.452 50.000 16.30 0.00 39.91 4.79
3065 5185 7.485913 CGATTTATTTTCTGTTCCCTCAATGTG 59.514 37.037 0.00 0.00 0.00 3.21
3124 5244 8.885494 TTCTTTTGTAGGGAAAACATTTCATG 57.115 30.769 5.32 0.00 0.00 3.07
3148 5268 8.514330 TGTTATTGGTGTTTTCTCTTTGTACT 57.486 30.769 0.00 0.00 0.00 2.73
3197 5317 3.703286 GCATGCTGCATTGTGAGATAA 57.297 42.857 13.38 0.00 44.26 1.75
3263 5383 7.817418 AACTTTAACAGCTTTTCCATGACTA 57.183 32.000 0.00 0.00 0.00 2.59
3314 5434 0.175760 GGTTGCTCTGCAGGTATCGA 59.824 55.000 15.13 0.00 40.61 3.59
3324 5444 0.105039 CAGGTATCGAAGGGTCAGGC 59.895 60.000 0.00 0.00 0.00 4.85
3325 5445 1.049289 AGGTATCGAAGGGTCAGGCC 61.049 60.000 0.00 0.00 0.00 5.19
3326 5446 1.067582 GTATCGAAGGGTCAGGCCG 59.932 63.158 0.00 0.00 38.44 6.13
3327 5447 1.380785 TATCGAAGGGTCAGGCCGT 60.381 57.895 0.00 0.00 38.44 5.68
3328 5448 1.389609 TATCGAAGGGTCAGGCCGTC 61.390 60.000 0.00 0.00 38.44 4.79
3329 5449 3.691342 CGAAGGGTCAGGCCGTCA 61.691 66.667 0.00 0.00 38.44 4.35
3330 5450 2.266055 GAAGGGTCAGGCCGTCAG 59.734 66.667 0.00 0.00 38.44 3.51
3331 5451 3.316573 GAAGGGTCAGGCCGTCAGG 62.317 68.421 0.00 0.00 38.44 3.86
3336 5456 0.252197 GGTCAGGCCGTCAGGTTTAT 59.748 55.000 0.00 0.00 40.50 1.40
3363 5483 2.279741 TGCGATGCAGAAGTGGATTAC 58.720 47.619 0.00 0.00 34.30 1.89
3364 5484 1.258982 GCGATGCAGAAGTGGATTACG 59.741 52.381 0.00 0.00 34.30 3.18
3409 5529 2.992689 TGCTGTGCATGGGGCTTG 60.993 61.111 0.00 0.00 45.15 4.01
3419 5539 3.512516 GGGGCTTGTGATGCGCTC 61.513 66.667 9.73 4.27 42.03 5.03
3428 5548 2.825836 GATGCGCTCCACAAGGGG 60.826 66.667 9.73 0.00 38.35 4.79
3465 5585 5.180492 TGGTCAACCATAACTTGAAACGATC 59.820 40.000 0.00 0.00 42.01 3.69
3467 5587 6.077838 GTCAACCATAACTTGAAACGATCAC 58.922 40.000 0.00 0.00 37.92 3.06
3470 5590 4.935808 ACCATAACTTGAAACGATCACTCC 59.064 41.667 0.00 0.00 37.92 3.85
3492 5619 0.253044 TAAGCTGCCGCCTGATTTCT 59.747 50.000 0.00 0.00 36.60 2.52
3504 5631 3.934068 CCTGATTTCTGCAGGCAAAATT 58.066 40.909 15.13 0.00 45.66 1.82
3506 5633 4.561938 CCTGATTTCTGCAGGCAAAATTCA 60.562 41.667 15.13 11.21 45.66 2.57
3512 5639 2.803956 CTGCAGGCAAAATTCAAACTGG 59.196 45.455 5.57 0.00 0.00 4.00
3539 5666 5.220970 CGAAGGGAAGTTAACTTTGCTTTGA 60.221 40.000 21.40 0.00 36.11 2.69
3542 5669 6.515832 AGGGAAGTTAACTTTGCTTTGATTG 58.484 36.000 21.40 0.00 36.11 2.67
3561 5688 1.519455 GCGCATCAGCTAGAACCGT 60.519 57.895 0.30 0.00 39.10 4.83
3568 5696 1.178276 CAGCTAGAACCGTCCTGTCT 58.822 55.000 0.00 0.00 0.00 3.41
3573 5701 2.029844 GAACCGTCCTGTCTGCTGC 61.030 63.158 0.00 0.00 0.00 5.25
3579 5707 1.400629 CGTCCTGTCTGCTGCATTTTG 60.401 52.381 1.31 0.00 0.00 2.44
3582 5710 1.336517 CCTGTCTGCTGCATTTTGTGG 60.337 52.381 1.31 0.00 0.00 4.17
3583 5711 0.032403 TGTCTGCTGCATTTTGTGGC 59.968 50.000 1.31 0.00 0.00 5.01
3584 5712 0.668401 GTCTGCTGCATTTTGTGGCC 60.668 55.000 1.31 0.00 0.00 5.36
3585 5713 1.375013 CTGCTGCATTTTGTGGCCC 60.375 57.895 1.31 0.00 0.00 5.80
3586 5714 2.102109 CTGCTGCATTTTGTGGCCCA 62.102 55.000 1.31 0.00 0.00 5.36
3587 5715 1.297364 GCTGCATTTTGTGGCCCAT 59.703 52.632 0.00 0.00 0.00 4.00
3588 5716 0.321830 GCTGCATTTTGTGGCCCATT 60.322 50.000 0.00 0.00 0.00 3.16
3589 5717 1.444836 CTGCATTTTGTGGCCCATTG 58.555 50.000 0.00 0.00 0.00 2.82
3590 5718 0.605860 TGCATTTTGTGGCCCATTGC 60.606 50.000 0.00 8.51 40.16 3.56
3591 5719 0.321830 GCATTTTGTGGCCCATTGCT 60.322 50.000 0.00 0.00 40.92 3.91
3592 5720 1.883209 GCATTTTGTGGCCCATTGCTT 60.883 47.619 0.00 0.00 40.92 3.91
3593 5721 1.807742 CATTTTGTGGCCCATTGCTTG 59.192 47.619 0.00 0.00 40.92 4.01
3594 5722 0.835941 TTTTGTGGCCCATTGCTTGT 59.164 45.000 0.00 0.00 40.92 3.16
3595 5723 0.106335 TTTGTGGCCCATTGCTTGTG 59.894 50.000 0.00 0.00 40.92 3.33
3596 5724 1.047596 TTGTGGCCCATTGCTTGTGT 61.048 50.000 0.00 0.00 40.92 3.72
3597 5725 1.047596 TGTGGCCCATTGCTTGTGTT 61.048 50.000 0.00 0.00 40.92 3.32
3598 5726 0.600782 GTGGCCCATTGCTTGTGTTG 60.601 55.000 0.00 0.00 40.92 3.33
3599 5727 1.047596 TGGCCCATTGCTTGTGTTGT 61.048 50.000 0.00 0.00 40.92 3.32
3627 5755 8.853345 CATACTATTTTCTGTGTTGTGCATTTC 58.147 33.333 0.00 0.00 0.00 2.17
3659 5787 2.552155 GGTTTGCCAGTGTCCTATGACA 60.552 50.000 0.00 0.00 40.97 3.58
3672 5800 7.439157 TGTCCTATGACATTTTGTTCTCTTG 57.561 36.000 0.00 0.00 46.40 3.02
3679 5807 6.092092 TGACATTTTGTTCTCTTGTGTGTTG 58.908 36.000 0.00 0.00 0.00 3.33
3685 5813 3.997681 TGTTCTCTTGTGTGTTGTCGAAA 59.002 39.130 0.00 0.00 0.00 3.46
3704 5832 6.688813 GTCGAAATTGTATTCCAAAGAGATGC 59.311 38.462 0.00 0.00 36.44 3.91
3716 5844 0.851469 AGAGATGCCATTGCTCCCAT 59.149 50.000 0.00 0.00 38.71 4.00
3752 5880 9.603921 ATGGGTTGAATTAATTTGCTTATTCAG 57.396 29.630 1.43 0.00 30.97 3.02
3790 5918 2.959030 GGGACAGGCAGTTTTTCTTCTT 59.041 45.455 0.00 0.00 0.00 2.52
3791 5919 3.384789 GGGACAGGCAGTTTTTCTTCTTT 59.615 43.478 0.00 0.00 0.00 2.52
3792 5920 4.363138 GGACAGGCAGTTTTTCTTCTTTG 58.637 43.478 0.00 0.00 0.00 2.77
3793 5921 4.097892 GGACAGGCAGTTTTTCTTCTTTGA 59.902 41.667 0.00 0.00 0.00 2.69
3794 5922 5.221322 GGACAGGCAGTTTTTCTTCTTTGAT 60.221 40.000 0.00 0.00 0.00 2.57
3795 5923 5.594926 ACAGGCAGTTTTTCTTCTTTGATG 58.405 37.500 0.00 0.00 0.00 3.07
3796 5924 4.986659 CAGGCAGTTTTTCTTCTTTGATGG 59.013 41.667 0.00 0.00 0.00 3.51
3797 5925 4.651045 AGGCAGTTTTTCTTCTTTGATGGT 59.349 37.500 0.00 0.00 0.00 3.55
3798 5926 5.833131 AGGCAGTTTTTCTTCTTTGATGGTA 59.167 36.000 0.00 0.00 0.00 3.25
3799 5927 6.323739 AGGCAGTTTTTCTTCTTTGATGGTAA 59.676 34.615 0.00 0.00 0.00 2.85
3800 5928 6.642540 GGCAGTTTTTCTTCTTTGATGGTAAG 59.357 38.462 0.00 0.00 0.00 2.34
3801 5929 7.425606 GCAGTTTTTCTTCTTTGATGGTAAGA 58.574 34.615 0.00 0.00 0.00 2.10
3802 5930 7.592903 GCAGTTTTTCTTCTTTGATGGTAAGAG 59.407 37.037 0.00 0.00 33.49 2.85
3803 5931 8.840321 CAGTTTTTCTTCTTTGATGGTAAGAGA 58.160 33.333 0.00 0.00 33.49 3.10
3804 5932 9.579932 AGTTTTTCTTCTTTGATGGTAAGAGAT 57.420 29.630 0.00 0.00 33.49 2.75
3805 5933 9.617975 GTTTTTCTTCTTTGATGGTAAGAGATG 57.382 33.333 0.00 0.00 33.49 2.90
3806 5934 7.928307 TTTCTTCTTTGATGGTAAGAGATGG 57.072 36.000 0.00 0.00 33.49 3.51
3807 5935 6.874278 TCTTCTTTGATGGTAAGAGATGGA 57.126 37.500 0.00 0.00 33.49 3.41
3808 5936 7.257790 TCTTCTTTGATGGTAAGAGATGGAA 57.742 36.000 0.00 0.00 33.49 3.53
3809 5937 7.106239 TCTTCTTTGATGGTAAGAGATGGAAC 58.894 38.462 0.00 0.00 33.49 3.62
3810 5938 6.627087 TCTTTGATGGTAAGAGATGGAACT 57.373 37.500 0.00 0.00 0.00 3.01
3811 5939 7.020827 TCTTTGATGGTAAGAGATGGAACTT 57.979 36.000 0.00 0.00 0.00 2.66
3812 5940 8.146053 TCTTTGATGGTAAGAGATGGAACTTA 57.854 34.615 0.00 0.00 0.00 2.24
3813 5941 8.772250 TCTTTGATGGTAAGAGATGGAACTTAT 58.228 33.333 0.00 0.00 32.48 1.73
3816 5944 9.434275 TTGATGGTAAGAGATGGAACTTATAGA 57.566 33.333 0.00 0.00 32.48 1.98
3817 5945 8.861086 TGATGGTAAGAGATGGAACTTATAGAC 58.139 37.037 0.00 0.00 32.48 2.59
3818 5946 7.273320 TGGTAAGAGATGGAACTTATAGACG 57.727 40.000 0.00 0.00 32.48 4.18
3819 5947 7.058525 TGGTAAGAGATGGAACTTATAGACGA 58.941 38.462 0.00 0.00 32.48 4.20
3820 5948 7.013083 TGGTAAGAGATGGAACTTATAGACGAC 59.987 40.741 0.00 0.00 32.48 4.34
3821 5949 5.676532 AGAGATGGAACTTATAGACGACG 57.323 43.478 0.00 0.00 0.00 5.12
3822 5950 5.124645 AGAGATGGAACTTATAGACGACGT 58.875 41.667 0.00 0.00 0.00 4.34
3823 5951 6.286758 AGAGATGGAACTTATAGACGACGTA 58.713 40.000 0.00 0.00 0.00 3.57
3824 5952 6.765036 AGAGATGGAACTTATAGACGACGTAA 59.235 38.462 0.00 0.00 0.00 3.18
3825 5953 7.444792 AGAGATGGAACTTATAGACGACGTAAT 59.555 37.037 0.00 0.04 0.00 1.89
3826 5954 7.361127 AGATGGAACTTATAGACGACGTAATG 58.639 38.462 0.00 0.00 0.00 1.90
3827 5955 5.276270 TGGAACTTATAGACGACGTAATGC 58.724 41.667 0.00 0.00 0.00 3.56
3828 5956 4.678742 GGAACTTATAGACGACGTAATGCC 59.321 45.833 0.00 0.00 0.00 4.40
3829 5957 3.881795 ACTTATAGACGACGTAATGCCG 58.118 45.455 0.00 0.00 0.00 5.69
3830 5958 2.975410 TATAGACGACGTAATGCCGG 57.025 50.000 0.00 0.00 0.00 6.13
3831 5959 1.027357 ATAGACGACGTAATGCCGGT 58.973 50.000 1.90 0.00 0.00 5.28
3832 5960 0.099259 TAGACGACGTAATGCCGGTG 59.901 55.000 1.90 0.00 0.00 4.94
3833 5961 2.795389 GACGACGTAATGCCGGTGC 61.795 63.158 1.90 0.00 38.26 5.01
3834 5962 2.508439 CGACGTAATGCCGGTGCT 60.508 61.111 1.90 0.00 38.71 4.40
3835 5963 2.514013 CGACGTAATGCCGGTGCTC 61.514 63.158 1.90 0.00 38.71 4.26
3836 5964 1.153628 GACGTAATGCCGGTGCTCT 60.154 57.895 1.90 0.00 38.71 4.09
3837 5965 1.421410 GACGTAATGCCGGTGCTCTG 61.421 60.000 1.90 0.00 38.71 3.35
3838 5966 2.173669 CGTAATGCCGGTGCTCTGG 61.174 63.158 9.38 9.38 42.72 3.86
3839 5967 1.819632 GTAATGCCGGTGCTCTGGG 60.820 63.158 15.29 4.13 40.31 4.45
3840 5968 1.992834 TAATGCCGGTGCTCTGGGA 60.993 57.895 15.29 13.00 44.31 4.37
3841 5969 1.558167 TAATGCCGGTGCTCTGGGAA 61.558 55.000 12.12 0.00 43.45 3.97
3842 5970 2.424842 AATGCCGGTGCTCTGGGAAA 62.425 55.000 12.12 0.00 43.45 3.13
3843 5971 2.747855 GCCGGTGCTCTGGGAAAG 60.748 66.667 15.29 0.00 40.31 2.62
3844 5972 2.045926 CCGGTGCTCTGGGAAAGG 60.046 66.667 5.68 0.00 36.50 3.11
3845 5973 2.750350 CGGTGCTCTGGGAAAGGT 59.250 61.111 0.00 0.00 0.00 3.50
3846 5974 1.550130 CCGGTGCTCTGGGAAAGGTA 61.550 60.000 5.68 0.00 36.50 3.08
3847 5975 0.323629 CGGTGCTCTGGGAAAGGTAA 59.676 55.000 0.00 0.00 0.00 2.85
3848 5976 1.065418 CGGTGCTCTGGGAAAGGTAAT 60.065 52.381 0.00 0.00 0.00 1.89
3849 5977 2.369394 GGTGCTCTGGGAAAGGTAATG 58.631 52.381 0.00 0.00 0.00 1.90
3850 5978 2.026262 GGTGCTCTGGGAAAGGTAATGA 60.026 50.000 0.00 0.00 0.00 2.57
3851 5979 3.561313 GGTGCTCTGGGAAAGGTAATGAA 60.561 47.826 0.00 0.00 0.00 2.57
3852 5980 4.273318 GTGCTCTGGGAAAGGTAATGAAT 58.727 43.478 0.00 0.00 0.00 2.57
3853 5981 4.336713 GTGCTCTGGGAAAGGTAATGAATC 59.663 45.833 0.00 0.00 0.00 2.52
3854 5982 3.885901 GCTCTGGGAAAGGTAATGAATCC 59.114 47.826 0.00 0.00 0.00 3.01
3855 5983 4.385754 GCTCTGGGAAAGGTAATGAATCCT 60.386 45.833 0.00 0.00 35.34 3.24
3856 5984 5.760131 CTCTGGGAAAGGTAATGAATCCTT 58.240 41.667 0.00 0.00 44.71 3.36
3857 5985 5.755849 TCTGGGAAAGGTAATGAATCCTTC 58.244 41.667 0.00 0.00 42.38 3.46
3858 5986 5.492524 TCTGGGAAAGGTAATGAATCCTTCT 59.507 40.000 0.00 0.00 42.38 2.85
3859 5987 6.011628 TCTGGGAAAGGTAATGAATCCTTCTT 60.012 38.462 0.00 0.00 42.38 2.52
3860 5988 6.561294 TGGGAAAGGTAATGAATCCTTCTTT 58.439 36.000 0.00 0.00 42.38 2.52
3861 5989 7.016296 TGGGAAAGGTAATGAATCCTTCTTTT 58.984 34.615 0.00 0.00 42.38 2.27
3862 5990 7.178451 TGGGAAAGGTAATGAATCCTTCTTTTC 59.822 37.037 0.00 0.00 42.38 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 8.782144 CAATAAGCACCAAAATTTTGTAACCAT 58.218 29.630 25.25 11.99 36.45 3.55
44 45 7.770897 ACAATAAGCACCAAAATTTTGTAACCA 59.229 29.630 25.25 9.62 36.45 3.67
45 46 8.148807 ACAATAAGCACCAAAATTTTGTAACC 57.851 30.769 25.25 12.91 36.45 2.85
46 47 9.644993 GAACAATAAGCACCAAAATTTTGTAAC 57.355 29.630 25.25 15.36 36.45 2.50
47 48 9.606631 AGAACAATAAGCACCAAAATTTTGTAA 57.393 25.926 25.25 7.96 36.45 2.41
48 49 9.606631 AAGAACAATAAGCACCAAAATTTTGTA 57.393 25.926 25.25 13.54 36.45 2.41
49 50 8.397148 CAAGAACAATAAGCACCAAAATTTTGT 58.603 29.630 25.25 13.31 36.45 2.83
50 51 7.376601 GCAAGAACAATAAGCACCAAAATTTTG 59.623 33.333 21.65 21.65 37.90 2.44
51 52 7.416817 GCAAGAACAATAAGCACCAAAATTTT 58.583 30.769 0.00 0.00 0.00 1.82
52 53 6.017192 GGCAAGAACAATAAGCACCAAAATTT 60.017 34.615 0.00 0.00 0.00 1.82
53 54 5.469760 GGCAAGAACAATAAGCACCAAAATT 59.530 36.000 0.00 0.00 0.00 1.82
54 55 4.996758 GGCAAGAACAATAAGCACCAAAAT 59.003 37.500 0.00 0.00 0.00 1.82
55 56 4.376146 GGCAAGAACAATAAGCACCAAAA 58.624 39.130 0.00 0.00 0.00 2.44
56 57 3.244044 GGGCAAGAACAATAAGCACCAAA 60.244 43.478 0.00 0.00 0.00 3.28
57 58 2.298729 GGGCAAGAACAATAAGCACCAA 59.701 45.455 0.00 0.00 0.00 3.67
58 59 1.892474 GGGCAAGAACAATAAGCACCA 59.108 47.619 0.00 0.00 0.00 4.17
59 60 1.204704 GGGGCAAGAACAATAAGCACC 59.795 52.381 0.00 0.00 42.17 5.01
60 61 1.204704 GGGGGCAAGAACAATAAGCAC 59.795 52.381 0.00 0.00 0.00 4.40
61 62 1.555967 GGGGGCAAGAACAATAAGCA 58.444 50.000 0.00 0.00 0.00 3.91
78 79 1.609208 CAGAAATCGGCAATAGGGGG 58.391 55.000 0.00 0.00 0.00 5.40
79 80 1.133792 ACCAGAAATCGGCAATAGGGG 60.134 52.381 0.00 0.00 0.00 4.79
80 81 2.348411 ACCAGAAATCGGCAATAGGG 57.652 50.000 0.00 0.00 0.00 3.53
81 82 3.066760 GGAAACCAGAAATCGGCAATAGG 59.933 47.826 0.00 0.00 0.00 2.57
82 83 3.947834 AGGAAACCAGAAATCGGCAATAG 59.052 43.478 0.00 0.00 0.00 1.73
83 84 3.945285 GAGGAAACCAGAAATCGGCAATA 59.055 43.478 0.00 0.00 0.00 1.90
84 85 2.755103 GAGGAAACCAGAAATCGGCAAT 59.245 45.455 0.00 0.00 0.00 3.56
85 86 2.159382 GAGGAAACCAGAAATCGGCAA 58.841 47.619 0.00 0.00 0.00 4.52
86 87 1.613255 GGAGGAAACCAGAAATCGGCA 60.613 52.381 0.00 0.00 0.00 5.69
87 88 1.095600 GGAGGAAACCAGAAATCGGC 58.904 55.000 0.00 0.00 0.00 5.54
88 89 1.282157 AGGGAGGAAACCAGAAATCGG 59.718 52.381 0.00 0.00 0.00 4.18
89 90 2.359900 CAGGGAGGAAACCAGAAATCG 58.640 52.381 0.00 0.00 0.00 3.34
90 91 2.621668 CCCAGGGAGGAAACCAGAAATC 60.622 54.545 0.00 0.00 41.22 2.17
91 92 1.359130 CCCAGGGAGGAAACCAGAAAT 59.641 52.381 0.00 0.00 41.22 2.17
92 93 0.777446 CCCAGGGAGGAAACCAGAAA 59.223 55.000 0.00 0.00 41.22 2.52
93 94 0.402861 ACCCAGGGAGGAAACCAGAA 60.403 55.000 14.54 0.00 41.22 3.02
94 95 0.402861 AACCCAGGGAGGAAACCAGA 60.403 55.000 14.54 0.00 41.22 3.86
95 96 0.251341 CAACCCAGGGAGGAAACCAG 60.251 60.000 14.54 0.00 41.22 4.00
96 97 0.996762 ACAACCCAGGGAGGAAACCA 60.997 55.000 14.54 0.00 41.22 3.67
97 98 0.187606 AACAACCCAGGGAGGAAACC 59.812 55.000 14.54 0.00 41.22 3.27
98 99 1.145119 AGAACAACCCAGGGAGGAAAC 59.855 52.381 14.54 0.00 41.22 2.78
99 100 1.144913 CAGAACAACCCAGGGAGGAAA 59.855 52.381 14.54 0.00 41.22 3.13
100 101 0.771127 CAGAACAACCCAGGGAGGAA 59.229 55.000 14.54 0.00 41.22 3.36
101 102 0.104672 TCAGAACAACCCAGGGAGGA 60.105 55.000 14.54 0.00 41.22 3.71
102 103 0.995024 ATCAGAACAACCCAGGGAGG 59.005 55.000 14.54 6.00 37.03 4.30
103 104 5.832539 ATATATCAGAACAACCCAGGGAG 57.167 43.478 14.54 6.84 0.00 4.30
104 105 6.590656 AAATATATCAGAACAACCCAGGGA 57.409 37.500 14.54 0.00 0.00 4.20
105 106 8.217799 TCTAAAATATATCAGAACAACCCAGGG 58.782 37.037 2.85 2.85 0.00 4.45
106 107 9.627123 TTCTAAAATATATCAGAACAACCCAGG 57.373 33.333 0.00 0.00 0.00 4.45
144 145 5.666969 TGAACTTGTTGTATGGAAACTCG 57.333 39.130 0.00 0.00 0.00 4.18
179 180 9.219603 CTCCATTCTTGTTACTCTGTAAAATGA 57.780 33.333 11.21 4.25 0.00 2.57
195 196 5.009631 TGTAACCACCAATCTCCATTCTTG 58.990 41.667 0.00 0.00 0.00 3.02
267 268 3.548818 CGGACAAGCTTTGGAAAAGACTG 60.549 47.826 0.00 2.79 34.12 3.51
342 343 2.290393 CCCATGGGAGGGCTAGGA 59.710 66.667 28.27 0.00 43.10 2.94
384 385 5.358090 TGCACATTTTGAAATGAAGCAGAA 58.642 33.333 23.53 11.55 46.72 3.02
440 442 4.120589 CCTAGAACGAAGGTTAGGCATTC 58.879 47.826 0.00 0.00 36.24 2.67
455 457 3.632855 CCGTATCGGTTACCCTAGAAC 57.367 52.381 0.00 0.00 42.73 3.01
506 508 2.284190 GTCCTCCATAGCTGAACTTGC 58.716 52.381 0.00 0.00 0.00 4.01
528 530 4.505191 CGGTACTAATTAACACATCCACCG 59.495 45.833 0.00 0.00 39.18 4.94
569 571 9.669353 GACGAAACTTGCATTTATTGATGATAT 57.331 29.630 0.00 0.00 0.00 1.63
618 621 8.540492 GTGAGTGTATGACATTTATTTAGTCCG 58.460 37.037 0.00 0.00 0.00 4.79
643 646 2.448926 TGTCATGTCGGTTCGAATGT 57.551 45.000 0.00 0.00 37.72 2.71
696 699 6.240145 AGAGAACGGAGGGAGTAGTATATTC 58.760 44.000 0.00 0.00 0.00 1.75
719 731 9.125026 ACTGTCCAAAATGCCTTATCTTATAAG 57.875 33.333 6.11 6.11 0.00 1.73
732 744 4.187694 TCAAAACCAACTGTCCAAAATGC 58.812 39.130 0.00 0.00 0.00 3.56
765 777 6.090898 AGACGTTTATACAATTCAGACAGCAC 59.909 38.462 0.00 0.00 0.00 4.40
766 778 6.163476 AGACGTTTATACAATTCAGACAGCA 58.837 36.000 0.00 0.00 0.00 4.41
781 793 9.379791 CTCTGTTCCCTTTTATAAGACGTTTAT 57.620 33.333 0.00 0.00 32.92 1.40
814 1609 5.104982 TGTTTCAGCCCACTTCTTTGATTTT 60.105 36.000 0.00 0.00 0.00 1.82
830 1626 4.984785 GGGAGTCTTCATTTTTGTTTCAGC 59.015 41.667 0.00 0.00 0.00 4.26
840 1636 4.387026 TCATGTTGGGGAGTCTTCATTT 57.613 40.909 0.00 0.00 0.00 2.32
841 1637 4.018141 TCATCATGTTGGGGAGTCTTCATT 60.018 41.667 3.98 0.00 0.00 2.57
843 1639 2.912295 TCATCATGTTGGGGAGTCTTCA 59.088 45.455 3.98 0.00 0.00 3.02
846 1642 4.598036 AAATCATCATGTTGGGGAGTCT 57.402 40.909 3.98 0.00 0.00 3.24
847 1643 4.142093 CCAAAATCATCATGTTGGGGAGTC 60.142 45.833 3.98 0.00 42.12 3.36
848 1644 3.770933 CCAAAATCATCATGTTGGGGAGT 59.229 43.478 3.98 0.00 42.12 3.85
849 1645 4.025360 TCCAAAATCATCATGTTGGGGAG 58.975 43.478 0.00 0.00 44.97 4.30
850 1646 3.768757 GTCCAAAATCATCATGTTGGGGA 59.231 43.478 0.00 4.95 44.97 4.81
851 1647 3.770933 AGTCCAAAATCATCATGTTGGGG 59.229 43.478 0.00 3.12 44.97 4.96
852 1648 4.463539 TCAGTCCAAAATCATCATGTTGGG 59.536 41.667 0.00 1.36 44.97 4.12
854 1650 7.277098 GGAAATCAGTCCAAAATCATCATGTTG 59.723 37.037 0.00 0.00 37.65 3.33
855 1651 7.325694 GGAAATCAGTCCAAAATCATCATGTT 58.674 34.615 0.00 0.00 37.65 2.71
857 1653 6.127281 TGGGAAATCAGTCCAAAATCATCATG 60.127 38.462 0.00 0.00 39.70 3.07
858 1654 5.959594 TGGGAAATCAGTCCAAAATCATCAT 59.040 36.000 0.00 0.00 39.70 2.45
860 1656 5.680665 GCTGGGAAATCAGTCCAAAATCATC 60.681 44.000 0.00 0.00 39.70 2.92
911 1753 1.896694 GGGCTGAGAGAGTGGAGTG 59.103 63.158 0.00 0.00 0.00 3.51
954 1796 0.820074 TCACACGATGCGGGGTTTTT 60.820 50.000 0.00 0.00 32.94 1.94
955 1797 1.228003 TCACACGATGCGGGGTTTT 60.228 52.632 0.00 0.00 32.94 2.43
956 1798 1.671054 CTCACACGATGCGGGGTTT 60.671 57.895 0.00 0.00 32.94 3.27
957 1799 2.047274 CTCACACGATGCGGGGTT 60.047 61.111 0.00 0.00 32.94 4.11
958 1800 4.082523 CCTCACACGATGCGGGGT 62.083 66.667 0.00 0.00 32.94 4.95
959 1801 4.082523 ACCTCACACGATGCGGGG 62.083 66.667 0.00 0.00 37.52 5.73
960 1802 2.815211 CACCTCACACGATGCGGG 60.815 66.667 0.00 0.00 37.52 6.13
961 1803 1.807165 CTCACCTCACACGATGCGG 60.807 63.158 0.00 0.00 39.30 5.69
1473 2345 3.316308 CCAAGACAACCTGGAACTGAAAG 59.684 47.826 0.00 0.00 42.29 2.62
1474 2346 3.287222 CCAAGACAACCTGGAACTGAAA 58.713 45.455 0.00 0.00 0.00 2.69
1475 2347 2.241176 ACCAAGACAACCTGGAACTGAA 59.759 45.455 0.00 0.00 0.00 3.02
1476 2348 1.843851 ACCAAGACAACCTGGAACTGA 59.156 47.619 0.00 0.00 0.00 3.41
1479 2360 2.779506 CCTACCAAGACAACCTGGAAC 58.220 52.381 0.00 0.00 0.00 3.62
1587 2476 1.076485 CATGGAAGCCTTGGGAGGG 60.076 63.158 0.00 0.00 43.75 4.30
1590 2479 1.210204 AGCTCATGGAAGCCTTGGGA 61.210 55.000 2.91 0.00 43.56 4.37
1614 2512 4.080356 TGGTTCATAGAAATGGAGGTGGAG 60.080 45.833 0.00 0.00 33.61 3.86
1950 4047 2.436115 CTTTCCTCGGCGAACCCC 60.436 66.667 12.13 0.00 0.00 4.95
1959 4056 1.238439 ACACCACATTGCTTTCCTCG 58.762 50.000 0.00 0.00 0.00 4.63
1965 4062 2.622942 CCACAGTAACACCACATTGCTT 59.377 45.455 0.00 0.00 0.00 3.91
1967 4064 1.953686 ACCACAGTAACACCACATTGC 59.046 47.619 0.00 0.00 0.00 3.56
2017 4114 2.189594 TTCCTGGAGTGCAATGACTG 57.810 50.000 0.00 0.00 0.00 3.51
2019 4116 2.485814 GAGTTTCCTGGAGTGCAATGAC 59.514 50.000 0.00 0.00 0.00 3.06
2040 4137 5.398416 GCAAAACCAGCGTTTAACTCTAAAG 59.602 40.000 0.00 0.00 41.42 1.85
2136 4256 4.761739 CACCTGTGACTCAAACCACATAAT 59.238 41.667 0.00 0.00 41.75 1.28
2184 4304 7.679783 CATCCTGTCCAGTGTCCATATAATTA 58.320 38.462 0.00 0.00 0.00 1.40
2185 4305 6.537355 CATCCTGTCCAGTGTCCATATAATT 58.463 40.000 0.00 0.00 0.00 1.40
2186 4306 5.513788 GCATCCTGTCCAGTGTCCATATAAT 60.514 44.000 0.00 0.00 0.00 1.28
2187 4307 4.202357 GCATCCTGTCCAGTGTCCATATAA 60.202 45.833 0.00 0.00 0.00 0.98
2188 4308 3.324846 GCATCCTGTCCAGTGTCCATATA 59.675 47.826 0.00 0.00 0.00 0.86
2189 4309 2.105477 GCATCCTGTCCAGTGTCCATAT 59.895 50.000 0.00 0.00 0.00 1.78
2190 4310 1.486310 GCATCCTGTCCAGTGTCCATA 59.514 52.381 0.00 0.00 0.00 2.74
2191 4311 0.254178 GCATCCTGTCCAGTGTCCAT 59.746 55.000 0.00 0.00 0.00 3.41
2192 4312 1.679311 GCATCCTGTCCAGTGTCCA 59.321 57.895 0.00 0.00 0.00 4.02
2193 4313 1.078143 GGCATCCTGTCCAGTGTCC 60.078 63.158 0.00 0.00 0.00 4.02
2194 4314 0.036732 TTGGCATCCTGTCCAGTGTC 59.963 55.000 0.00 0.00 33.32 3.67
2195 4315 0.700564 ATTGGCATCCTGTCCAGTGT 59.299 50.000 0.00 0.00 33.32 3.55
2196 4316 2.171237 TCTATTGGCATCCTGTCCAGTG 59.829 50.000 0.00 0.00 33.32 3.66
2197 4317 2.481441 TCTATTGGCATCCTGTCCAGT 58.519 47.619 0.00 0.00 33.32 4.00
2198 4318 3.565764 TTCTATTGGCATCCTGTCCAG 57.434 47.619 0.00 0.00 33.32 3.86
2199 4319 5.104151 TGTTATTCTATTGGCATCCTGTCCA 60.104 40.000 0.00 0.00 0.00 4.02
2200 4320 5.376625 TGTTATTCTATTGGCATCCTGTCC 58.623 41.667 0.00 0.00 0.00 4.02
2201 4321 6.942532 TTGTTATTCTATTGGCATCCTGTC 57.057 37.500 0.00 0.00 0.00 3.51
2202 4322 7.547227 GTTTTGTTATTCTATTGGCATCCTGT 58.453 34.615 0.00 0.00 0.00 4.00
2203 4323 6.692681 CGTTTTGTTATTCTATTGGCATCCTG 59.307 38.462 0.00 0.00 0.00 3.86
2204 4324 6.601613 TCGTTTTGTTATTCTATTGGCATCCT 59.398 34.615 0.00 0.00 0.00 3.24
2205 4325 6.791303 TCGTTTTGTTATTCTATTGGCATCC 58.209 36.000 0.00 0.00 0.00 3.51
2206 4326 7.753132 TGTTCGTTTTGTTATTCTATTGGCATC 59.247 33.333 0.00 0.00 0.00 3.91
2207 4327 7.598278 TGTTCGTTTTGTTATTCTATTGGCAT 58.402 30.769 0.00 0.00 0.00 4.40
2208 4328 6.971602 TGTTCGTTTTGTTATTCTATTGGCA 58.028 32.000 0.00 0.00 0.00 4.92
2209 4329 6.033513 GCTGTTCGTTTTGTTATTCTATTGGC 59.966 38.462 0.00 0.00 0.00 4.52
2210 4330 7.081349 TGCTGTTCGTTTTGTTATTCTATTGG 58.919 34.615 0.00 0.00 0.00 3.16
2211 4331 8.500837 TTGCTGTTCGTTTTGTTATTCTATTG 57.499 30.769 0.00 0.00 0.00 1.90
2222 4342 2.401720 GCGAATCTTGCTGTTCGTTTTG 59.598 45.455 8.93 0.00 46.44 2.44
2224 4344 1.601903 TGCGAATCTTGCTGTTCGTTT 59.398 42.857 8.93 0.00 46.44 3.60
2233 4353 9.282247 CCAATATATTATTTCTGCGAATCTTGC 57.718 33.333 0.00 0.00 0.00 4.01
2241 4361 8.322906 TCAACCTCCAATATATTATTTCTGCG 57.677 34.615 0.00 0.00 0.00 5.18
2391 4511 8.783093 TCTCAAACATACTAATTGAAAGTGTGG 58.217 33.333 8.05 0.00 39.57 4.17
2485 4605 7.923414 ACAGTATTTACTCCTTCCAATTCAC 57.077 36.000 0.00 0.00 33.46 3.18
2493 4613 7.054751 AGCCCAATAACAGTATTTACTCCTTC 58.945 38.462 0.00 0.00 33.46 3.46
2502 4622 8.686334 CACAAAGAATAGCCCAATAACAGTATT 58.314 33.333 0.00 0.00 0.00 1.89
2538 4658 4.322801 CGAGTAATTTGGAACAGAGGGAGT 60.323 45.833 0.00 0.00 42.39 3.85
2539 4659 4.184629 CGAGTAATTTGGAACAGAGGGAG 58.815 47.826 0.00 0.00 42.39 4.30
2540 4660 3.581332 ACGAGTAATTTGGAACAGAGGGA 59.419 43.478 0.00 0.00 42.39 4.20
2541 4661 3.933332 GACGAGTAATTTGGAACAGAGGG 59.067 47.826 0.00 0.00 42.39 4.30
2542 4662 3.612860 CGACGAGTAATTTGGAACAGAGG 59.387 47.826 0.00 0.00 42.39 3.69
2543 4663 3.060895 GCGACGAGTAATTTGGAACAGAG 59.939 47.826 0.00 0.00 42.39 3.35
2544 4664 2.991190 GCGACGAGTAATTTGGAACAGA 59.009 45.455 0.00 0.00 42.39 3.41
2545 4665 2.993899 AGCGACGAGTAATTTGGAACAG 59.006 45.455 0.00 0.00 42.39 3.16
2546 4666 2.734606 CAGCGACGAGTAATTTGGAACA 59.265 45.455 0.00 0.00 0.00 3.18
2547 4667 2.991190 TCAGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
2548 4668 3.306917 TCAGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
2549 4669 3.306917 TTCAGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
2550 4670 4.334443 CATTTCAGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
2551 4671 4.092821 TCCATTTCAGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
2552 4672 4.250464 TCCATTTCAGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
2553 4673 3.857052 TCCATTTCAGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
2554 4674 3.520290 TCCATTTCAGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
2555 4675 3.186909 CATCCATTTCAGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
2556 4676 2.165641 ACATCCATTTCAGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
2557 4677 1.066858 ACATCCATTTCAGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
2558 4678 1.645034 ACATCCATTTCAGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
2559 4679 2.951457 TACATCCATTTCAGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
2560 4680 3.384668 AGATACATCCATTTCAGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
2561 4681 5.773575 TCTAGATACATCCATTTCAGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
2562 4682 6.040955 AGTTCTAGATACATCCATTTCAGCGA 59.959 38.462 0.00 0.00 0.00 4.93
2563 4683 6.219473 AGTTCTAGATACATCCATTTCAGCG 58.781 40.000 0.00 0.00 0.00 5.18
2564 4684 9.547753 TTTAGTTCTAGATACATCCATTTCAGC 57.452 33.333 0.00 0.00 0.00 4.26
2595 4715 8.738645 TGTCGCACATATAGATGTATCTAGAT 57.261 34.615 10.73 10.73 44.82 1.98
2596 4716 8.561738 TTGTCGCACATATAGATGTATCTAGA 57.438 34.615 1.99 0.00 44.82 2.43
2597 4717 8.454894 ACTTGTCGCACATATAGATGTATCTAG 58.545 37.037 1.99 3.78 44.82 2.43
2598 4718 8.336801 ACTTGTCGCACATATAGATGTATCTA 57.663 34.615 1.99 4.22 44.82 1.98
2599 4719 7.220741 ACTTGTCGCACATATAGATGTATCT 57.779 36.000 1.99 0.00 44.82 1.98
2600 4720 8.965986 TTACTTGTCGCACATATAGATGTATC 57.034 34.615 1.99 0.00 44.82 2.24
2601 4721 9.929180 AATTACTTGTCGCACATATAGATGTAT 57.071 29.630 1.99 0.00 44.82 2.29
2602 4722 9.406828 GAATTACTTGTCGCACATATAGATGTA 57.593 33.333 1.99 0.00 44.82 2.29
2604 4724 7.410835 CCGAATTACTTGTCGCACATATAGATG 60.411 40.741 0.00 0.00 36.20 2.90
2605 4725 6.586463 CCGAATTACTTGTCGCACATATAGAT 59.414 38.462 0.00 0.00 35.93 1.98
2606 4726 5.918576 CCGAATTACTTGTCGCACATATAGA 59.081 40.000 0.00 0.00 35.93 1.98
2607 4727 5.918576 TCCGAATTACTTGTCGCACATATAG 59.081 40.000 0.00 0.00 35.93 1.31
2608 4728 5.834169 TCCGAATTACTTGTCGCACATATA 58.166 37.500 0.00 0.00 35.93 0.86
2609 4729 4.689071 TCCGAATTACTTGTCGCACATAT 58.311 39.130 0.00 0.00 35.93 1.78
2610 4730 4.112716 TCCGAATTACTTGTCGCACATA 57.887 40.909 0.00 0.00 35.93 2.29
2611 4731 2.967362 TCCGAATTACTTGTCGCACAT 58.033 42.857 0.00 0.00 35.93 3.21
2612 4732 2.442212 TCCGAATTACTTGTCGCACA 57.558 45.000 0.00 0.00 35.93 4.57
2613 4733 3.485216 CCATTCCGAATTACTTGTCGCAC 60.485 47.826 0.00 0.00 35.93 5.34
2614 4734 2.675844 CCATTCCGAATTACTTGTCGCA 59.324 45.455 0.00 0.00 35.93 5.10
2615 4735 2.933906 TCCATTCCGAATTACTTGTCGC 59.066 45.455 0.00 0.00 35.93 5.19
2616 4736 3.555956 CCTCCATTCCGAATTACTTGTCG 59.444 47.826 0.00 0.00 37.01 4.35
2617 4737 3.877508 CCCTCCATTCCGAATTACTTGTC 59.122 47.826 0.00 0.00 0.00 3.18
2618 4738 3.521937 TCCCTCCATTCCGAATTACTTGT 59.478 43.478 0.00 0.00 0.00 3.16
2619 4739 4.130118 CTCCCTCCATTCCGAATTACTTG 58.870 47.826 0.00 0.00 0.00 3.16
2620 4740 3.780850 ACTCCCTCCATTCCGAATTACTT 59.219 43.478 0.00 0.00 0.00 2.24
2621 4741 3.385115 ACTCCCTCCATTCCGAATTACT 58.615 45.455 0.00 0.00 0.00 2.24
2622 4742 3.840124 ACTCCCTCCATTCCGAATTAC 57.160 47.619 0.00 0.00 0.00 1.89
2623 4743 4.553678 ACTACTCCCTCCATTCCGAATTA 58.446 43.478 0.00 0.00 0.00 1.40
2624 4744 3.385115 ACTACTCCCTCCATTCCGAATT 58.615 45.455 0.00 0.00 0.00 2.17
2625 4745 3.047695 ACTACTCCCTCCATTCCGAAT 57.952 47.619 0.00 0.00 0.00 3.34
2626 4746 2.544844 ACTACTCCCTCCATTCCGAA 57.455 50.000 0.00 0.00 0.00 4.30
2627 4747 2.781757 TCTACTACTCCCTCCATTCCGA 59.218 50.000 0.00 0.00 0.00 4.55
2628 4748 3.225177 TCTACTACTCCCTCCATTCCG 57.775 52.381 0.00 0.00 0.00 4.30
2629 4749 5.659079 CCATATCTACTACTCCCTCCATTCC 59.341 48.000 0.00 0.00 0.00 3.01
2630 4750 5.128008 GCCATATCTACTACTCCCTCCATTC 59.872 48.000 0.00 0.00 0.00 2.67
2631 4751 5.026790 GCCATATCTACTACTCCCTCCATT 58.973 45.833 0.00 0.00 0.00 3.16
2632 4752 4.045974 TGCCATATCTACTACTCCCTCCAT 59.954 45.833 0.00 0.00 0.00 3.41
2633 4753 3.401342 TGCCATATCTACTACTCCCTCCA 59.599 47.826 0.00 0.00 0.00 3.86
2634 4754 4.048970 TGCCATATCTACTACTCCCTCC 57.951 50.000 0.00 0.00 0.00 4.30
2635 4755 6.266558 CCATATGCCATATCTACTACTCCCTC 59.733 46.154 0.00 0.00 0.00 4.30
2636 4756 6.139671 CCATATGCCATATCTACTACTCCCT 58.860 44.000 0.00 0.00 0.00 4.20
2637 4757 5.900123 ACCATATGCCATATCTACTACTCCC 59.100 44.000 0.00 0.00 0.00 4.30
2638 4758 7.124298 TGAACCATATGCCATATCTACTACTCC 59.876 40.741 0.00 0.00 0.00 3.85
2639 4759 8.067751 TGAACCATATGCCATATCTACTACTC 57.932 38.462 0.00 0.00 0.00 2.59
2640 4760 7.676043 ACTGAACCATATGCCATATCTACTACT 59.324 37.037 0.00 0.00 0.00 2.57
2641 4761 7.841956 ACTGAACCATATGCCATATCTACTAC 58.158 38.462 0.00 0.00 0.00 2.73
2765 4885 3.535561 ACCAATGAGATTCTAAGGCACG 58.464 45.455 0.00 0.00 0.00 5.34
2768 4888 6.319658 TCAATGAACCAATGAGATTCTAAGGC 59.680 38.462 0.00 0.00 0.00 4.35
2793 4913 5.730550 TCCGCATCTACAACAATAAGAAGT 58.269 37.500 0.00 0.00 0.00 3.01
2806 4926 2.738846 CAGCACCAATATCCGCATCTAC 59.261 50.000 0.00 0.00 0.00 2.59
2878 4998 5.474532 TGCCCAATCAACTCATTATGATAGC 59.525 40.000 0.00 0.00 35.29 2.97
2924 5044 8.337532 GCAAGAAAAACATTTCATTTTGCTACT 58.662 29.630 14.39 0.00 34.40 2.57
2925 5045 7.587392 GGCAAGAAAAACATTTCATTTTGCTAC 59.413 33.333 18.10 6.83 38.53 3.58
2926 5046 7.255070 GGGCAAGAAAAACATTTCATTTTGCTA 60.255 33.333 18.10 0.00 38.53 3.49
2927 5047 6.459985 GGGCAAGAAAAACATTTCATTTTGCT 60.460 34.615 18.10 0.00 38.53 3.91
2928 5048 5.686841 GGGCAAGAAAAACATTTCATTTTGC 59.313 36.000 13.76 13.76 38.14 3.68
2929 5049 6.793349 TGGGCAAGAAAAACATTTCATTTTG 58.207 32.000 4.34 2.01 33.53 2.44
2930 5050 7.585579 ATGGGCAAGAAAAACATTTCATTTT 57.414 28.000 4.34 0.00 33.53 1.82
2931 5051 7.284944 TGAATGGGCAAGAAAAACATTTCATTT 59.715 29.630 4.34 0.00 32.42 2.32
2932 5052 6.771749 TGAATGGGCAAGAAAAACATTTCATT 59.228 30.769 4.34 0.00 32.42 2.57
2933 5053 6.297582 TGAATGGGCAAGAAAAACATTTCAT 58.702 32.000 4.34 0.00 32.42 2.57
2934 5054 5.678583 TGAATGGGCAAGAAAAACATTTCA 58.321 33.333 4.34 0.00 32.42 2.69
2935 5055 6.429624 GTTGAATGGGCAAGAAAAACATTTC 58.570 36.000 0.00 0.00 32.42 2.17
2936 5056 5.007528 CGTTGAATGGGCAAGAAAAACATTT 59.992 36.000 0.00 0.00 32.42 2.32
2937 5057 4.511082 CGTTGAATGGGCAAGAAAAACATT 59.489 37.500 0.00 0.00 34.73 2.71
2938 5058 4.057432 CGTTGAATGGGCAAGAAAAACAT 58.943 39.130 0.00 0.00 0.00 2.71
2939 5059 3.452474 CGTTGAATGGGCAAGAAAAACA 58.548 40.909 0.00 0.00 0.00 2.83
2940 5060 2.799978 CCGTTGAATGGGCAAGAAAAAC 59.200 45.455 0.00 0.00 0.00 2.43
2941 5061 2.432510 ACCGTTGAATGGGCAAGAAAAA 59.567 40.909 8.51 0.00 0.00 1.94
2942 5062 2.035632 ACCGTTGAATGGGCAAGAAAA 58.964 42.857 8.51 0.00 0.00 2.29
2943 5063 1.698506 ACCGTTGAATGGGCAAGAAA 58.301 45.000 8.51 0.00 0.00 2.52
2944 5064 2.156098 GTACCGTTGAATGGGCAAGAA 58.844 47.619 8.51 0.00 0.00 2.52
2945 5065 1.349688 AGTACCGTTGAATGGGCAAGA 59.650 47.619 8.51 0.00 0.00 3.02
2946 5066 1.821216 AGTACCGTTGAATGGGCAAG 58.179 50.000 8.51 0.00 0.00 4.01
2947 5067 2.279935 AAGTACCGTTGAATGGGCAA 57.720 45.000 8.51 0.00 0.00 4.52
2948 5068 2.279935 AAAGTACCGTTGAATGGGCA 57.720 45.000 8.51 0.00 0.00 5.36
2949 5069 3.243602 ACAAAAAGTACCGTTGAATGGGC 60.244 43.478 8.51 0.41 0.00 5.36
2950 5070 4.577834 ACAAAAAGTACCGTTGAATGGG 57.422 40.909 8.51 0.00 0.00 4.00
2951 5071 6.895607 AAAACAAAAAGTACCGTTGAATGG 57.104 33.333 0.97 0.97 0.00 3.16
2954 5074 9.857957 AGAAATAAAACAAAAAGTACCGTTGAA 57.142 25.926 7.55 0.00 0.00 2.69
2955 5075 9.291664 CAGAAATAAAACAAAAAGTACCGTTGA 57.708 29.630 7.55 0.00 0.00 3.18
2956 5076 8.053653 GCAGAAATAAAACAAAAAGTACCGTTG 58.946 33.333 0.00 0.00 0.00 4.10
2957 5077 7.977293 AGCAGAAATAAAACAAAAAGTACCGTT 59.023 29.630 0.00 0.00 0.00 4.44
2958 5078 7.485810 AGCAGAAATAAAACAAAAAGTACCGT 58.514 30.769 0.00 0.00 0.00 4.83
2959 5079 7.924103 AGCAGAAATAAAACAAAAAGTACCG 57.076 32.000 0.00 0.00 0.00 4.02
2960 5080 9.961265 ACTAGCAGAAATAAAACAAAAAGTACC 57.039 29.630 0.00 0.00 0.00 3.34
2963 5083 8.817100 GCAACTAGCAGAAATAAAACAAAAAGT 58.183 29.630 0.00 0.00 44.79 2.66
3018 5138 3.551846 GTCCTCAAACTTGAAAGACCCA 58.448 45.455 9.58 0.00 35.83 4.51
3040 5160 8.522830 TCACATTGAGGGAACAGAAAATAAATC 58.477 33.333 0.00 0.00 0.00 2.17
3065 5185 5.940192 TGGCACACCGATATCAATTATTC 57.060 39.130 3.12 0.00 39.70 1.75
3123 5243 8.402472 CAGTACAAAGAGAAAACACCAATAACA 58.598 33.333 0.00 0.00 0.00 2.41
3124 5244 8.403236 ACAGTACAAAGAGAAAACACCAATAAC 58.597 33.333 0.00 0.00 0.00 1.89
3139 5259 5.590530 ATTGTGCCAAAACAGTACAAAGA 57.409 34.783 0.00 0.00 41.98 2.52
3148 5268 6.146837 CGAATTATGGAAATTGTGCCAAAACA 59.853 34.615 0.00 0.00 37.78 2.83
3225 5345 9.899226 AGCTGTTAAAGTTATCTCACATTTTTC 57.101 29.630 0.00 0.00 0.00 2.29
3281 5401 2.278849 CAACCAATGCCATCAGCCA 58.721 52.632 0.00 0.00 42.71 4.75
3314 5434 3.322466 CCTGACGGCCTGACCCTT 61.322 66.667 0.00 0.00 33.26 3.95
3324 5444 1.468520 CAGCCAACATAAACCTGACGG 59.531 52.381 0.00 0.00 0.00 4.79
3325 5445 1.135689 GCAGCCAACATAAACCTGACG 60.136 52.381 0.00 0.00 0.00 4.35
3326 5446 1.135689 CGCAGCCAACATAAACCTGAC 60.136 52.381 0.00 0.00 0.00 3.51
3327 5447 1.164411 CGCAGCCAACATAAACCTGA 58.836 50.000 0.00 0.00 0.00 3.86
3328 5448 1.164411 TCGCAGCCAACATAAACCTG 58.836 50.000 0.00 0.00 0.00 4.00
3329 5449 1.745087 CATCGCAGCCAACATAAACCT 59.255 47.619 0.00 0.00 0.00 3.50
3330 5450 1.798813 GCATCGCAGCCAACATAAACC 60.799 52.381 0.00 0.00 0.00 3.27
3331 5451 1.135431 TGCATCGCAGCCAACATAAAC 60.135 47.619 0.00 0.00 33.32 2.01
3354 5474 2.176889 ACCTACAGCACGTAATCCACT 58.823 47.619 0.00 0.00 0.00 4.00
3409 5529 2.401766 CCCTTGTGGAGCGCATCAC 61.402 63.158 21.14 21.14 35.39 3.06
3419 5539 3.023832 GGACATGTTAATCCCCTTGTGG 58.976 50.000 0.00 0.00 0.00 4.17
3424 5544 2.509964 GACCAGGACATGTTAATCCCCT 59.490 50.000 0.00 0.00 35.38 4.79
3428 5548 4.331968 TGGTTGACCAGGACATGTTAATC 58.668 43.478 0.00 0.00 42.01 1.75
3465 5585 2.103042 GCGGCAGCTTACAGGAGTG 61.103 63.158 0.00 0.00 41.01 3.51
3467 5587 2.512515 GGCGGCAGCTTACAGGAG 60.513 66.667 9.17 0.00 44.37 3.69
3470 5590 0.745845 AATCAGGCGGCAGCTTACAG 60.746 55.000 13.08 0.00 44.37 2.74
3492 5619 2.836262 CCAGTTTGAATTTTGCCTGCA 58.164 42.857 0.00 0.00 0.00 4.41
3501 5628 0.240945 CCTTCGCGCCAGTTTGAATT 59.759 50.000 0.00 0.00 0.00 2.17
3504 5631 2.668185 TTCCCTTCGCGCCAGTTTGA 62.668 55.000 0.00 0.00 0.00 2.69
3506 5633 1.966451 CTTCCCTTCGCGCCAGTTT 60.966 57.895 0.00 0.00 0.00 2.66
3512 5639 1.154197 AAGTTAACTTCCCTTCGCGC 58.846 50.000 15.22 0.00 0.00 6.86
3539 5666 1.303309 GTTCTAGCTGATGCGCCAAT 58.697 50.000 4.18 0.00 45.42 3.16
3542 5669 2.240500 CGGTTCTAGCTGATGCGCC 61.241 63.158 4.18 0.00 45.42 6.53
3561 5688 1.610038 CACAAAATGCAGCAGACAGGA 59.390 47.619 0.00 0.00 0.00 3.86
3568 5696 1.481901 ATGGGCCACAAAATGCAGCA 61.482 50.000 9.28 0.00 0.00 4.41
3573 5701 1.807742 CAAGCAATGGGCCACAAAATG 59.192 47.619 9.28 4.47 46.50 2.32
3579 5707 0.600782 CAACACAAGCAATGGGCCAC 60.601 55.000 9.28 0.00 46.50 5.01
3582 5710 1.223417 GCACAACACAAGCAATGGGC 61.223 55.000 0.00 0.00 45.30 5.36
3583 5711 0.104487 TGCACAACACAAGCAATGGG 59.896 50.000 0.00 0.00 38.89 4.00
3584 5712 2.157834 ATGCACAACACAAGCAATGG 57.842 45.000 0.00 0.00 42.15 3.16
3585 5713 3.904571 AGTATGCACAACACAAGCAATG 58.095 40.909 0.00 0.00 42.15 2.82
3586 5714 5.902613 ATAGTATGCACAACACAAGCAAT 57.097 34.783 0.00 0.00 42.15 3.56
3587 5715 5.703978 AATAGTATGCACAACACAAGCAA 57.296 34.783 0.00 0.00 42.15 3.91
3588 5716 5.703978 AAATAGTATGCACAACACAAGCA 57.296 34.783 0.00 0.00 43.14 3.91
3589 5717 6.306356 CAGAAAATAGTATGCACAACACAAGC 59.694 38.462 0.00 0.00 0.00 4.01
3590 5718 7.324375 CACAGAAAATAGTATGCACAACACAAG 59.676 37.037 0.00 0.00 0.00 3.16
3591 5719 7.138081 CACAGAAAATAGTATGCACAACACAA 58.862 34.615 0.00 0.00 0.00 3.33
3592 5720 6.262049 ACACAGAAAATAGTATGCACAACACA 59.738 34.615 0.00 0.00 0.00 3.72
3593 5721 6.668323 ACACAGAAAATAGTATGCACAACAC 58.332 36.000 0.00 0.00 0.00 3.32
3594 5722 6.875948 ACACAGAAAATAGTATGCACAACA 57.124 33.333 0.00 0.00 0.00 3.33
3595 5723 7.113404 CACAACACAGAAAATAGTATGCACAAC 59.887 37.037 0.00 0.00 0.00 3.32
3596 5724 7.138081 CACAACACAGAAAATAGTATGCACAA 58.862 34.615 0.00 0.00 0.00 3.33
3597 5725 6.667370 CACAACACAGAAAATAGTATGCACA 58.333 36.000 0.00 0.00 0.00 4.57
3598 5726 5.569059 GCACAACACAGAAAATAGTATGCAC 59.431 40.000 0.00 0.00 0.00 4.57
3599 5727 5.240403 TGCACAACACAGAAAATAGTATGCA 59.760 36.000 0.00 0.00 35.94 3.96
3659 5787 5.123186 TCGACAACACACAAGAGAACAAAAT 59.877 36.000 0.00 0.00 0.00 1.82
3672 5800 5.753744 TGGAATACAATTTCGACAACACAC 58.246 37.500 0.00 0.00 0.00 3.82
3679 5807 6.688813 GCATCTCTTTGGAATACAATTTCGAC 59.311 38.462 0.00 0.00 39.21 4.20
3685 5813 6.684613 GCAATGGCATCTCTTTGGAATACAAT 60.685 38.462 0.00 0.00 38.34 2.71
3704 5832 1.340248 GAAGCATCATGGGAGCAATGG 59.660 52.381 7.49 0.00 0.00 3.16
3716 5844 8.537728 AATTAATTCAACCCATAGAAGCATCA 57.462 30.769 0.00 0.00 0.00 3.07
3752 5880 5.080969 TGTCCCAGTAGTAGCATTGTTAC 57.919 43.478 2.71 2.71 0.00 2.50
3763 5891 1.435256 AAACTGCCTGTCCCAGTAGT 58.565 50.000 0.00 0.00 42.37 2.73
3790 5918 9.434275 TCTATAAGTTCCATCTCTTACCATCAA 57.566 33.333 0.00 0.00 0.00 2.57
3791 5919 8.861086 GTCTATAAGTTCCATCTCTTACCATCA 58.139 37.037 0.00 0.00 0.00 3.07
3792 5920 8.024285 CGTCTATAAGTTCCATCTCTTACCATC 58.976 40.741 0.00 0.00 0.00 3.51
3793 5921 7.724506 TCGTCTATAAGTTCCATCTCTTACCAT 59.275 37.037 0.00 0.00 0.00 3.55
3794 5922 7.013083 GTCGTCTATAAGTTCCATCTCTTACCA 59.987 40.741 0.00 0.00 0.00 3.25
3795 5923 7.361894 GTCGTCTATAAGTTCCATCTCTTACC 58.638 42.308 0.00 0.00 0.00 2.85
3796 5924 7.070798 CGTCGTCTATAAGTTCCATCTCTTAC 58.929 42.308 0.00 0.00 0.00 2.34
3797 5925 6.765036 ACGTCGTCTATAAGTTCCATCTCTTA 59.235 38.462 0.00 0.00 0.00 2.10
3798 5926 5.589452 ACGTCGTCTATAAGTTCCATCTCTT 59.411 40.000 0.00 0.00 0.00 2.85
3799 5927 5.124645 ACGTCGTCTATAAGTTCCATCTCT 58.875 41.667 0.00 0.00 0.00 3.10
3800 5928 5.421212 ACGTCGTCTATAAGTTCCATCTC 57.579 43.478 0.00 0.00 0.00 2.75
3801 5929 6.932356 TTACGTCGTCTATAAGTTCCATCT 57.068 37.500 0.00 0.00 0.00 2.90
3802 5930 6.087820 GCATTACGTCGTCTATAAGTTCCATC 59.912 42.308 0.00 0.00 0.00 3.51
3803 5931 5.919141 GCATTACGTCGTCTATAAGTTCCAT 59.081 40.000 0.00 0.00 0.00 3.41
3804 5932 5.276270 GCATTACGTCGTCTATAAGTTCCA 58.724 41.667 0.00 0.00 0.00 3.53
3805 5933 4.678742 GGCATTACGTCGTCTATAAGTTCC 59.321 45.833 0.00 0.00 0.00 3.62
3806 5934 4.378030 CGGCATTACGTCGTCTATAAGTTC 59.622 45.833 0.00 0.00 38.15 3.01
3807 5935 4.285292 CGGCATTACGTCGTCTATAAGTT 58.715 43.478 0.00 0.00 38.15 2.66
3808 5936 3.304257 CCGGCATTACGTCGTCTATAAGT 60.304 47.826 0.00 0.00 42.71 2.24
3809 5937 3.231965 CCGGCATTACGTCGTCTATAAG 58.768 50.000 0.00 0.00 42.71 1.73
3810 5938 2.618241 ACCGGCATTACGTCGTCTATAA 59.382 45.455 0.00 0.00 42.71 0.98
3811 5939 2.031769 CACCGGCATTACGTCGTCTATA 60.032 50.000 0.00 0.00 42.71 1.31
3812 5940 1.027357 ACCGGCATTACGTCGTCTAT 58.973 50.000 0.00 0.00 42.71 1.98
3813 5941 0.099259 CACCGGCATTACGTCGTCTA 59.901 55.000 0.00 0.00 42.71 2.59
3814 5942 1.153901 CACCGGCATTACGTCGTCT 60.154 57.895 0.00 0.00 42.71 4.18
3815 5943 2.795389 GCACCGGCATTACGTCGTC 61.795 63.158 0.00 0.00 42.71 4.20
3816 5944 2.812178 GCACCGGCATTACGTCGT 60.812 61.111 0.00 2.21 42.71 4.34
3817 5945 2.508439 AGCACCGGCATTACGTCG 60.508 61.111 0.00 0.00 44.61 5.12
3818 5946 1.153628 AGAGCACCGGCATTACGTC 60.154 57.895 0.00 0.00 44.61 4.34
3819 5947 1.447838 CAGAGCACCGGCATTACGT 60.448 57.895 0.00 0.00 44.61 3.57
3820 5948 2.173669 CCAGAGCACCGGCATTACG 61.174 63.158 0.00 0.00 44.61 3.18
3821 5949 1.819632 CCCAGAGCACCGGCATTAC 60.820 63.158 0.00 0.00 44.61 1.89
3822 5950 1.558167 TTCCCAGAGCACCGGCATTA 61.558 55.000 0.00 0.00 44.61 1.90
3823 5951 2.424842 TTTCCCAGAGCACCGGCATT 62.425 55.000 0.00 0.00 44.61 3.56
3824 5952 2.826777 CTTTCCCAGAGCACCGGCAT 62.827 60.000 0.00 0.00 44.61 4.40
3825 5953 3.551496 CTTTCCCAGAGCACCGGCA 62.551 63.158 0.00 0.00 44.61 5.69
3826 5954 2.747855 CTTTCCCAGAGCACCGGC 60.748 66.667 0.00 0.00 41.61 6.13
3827 5955 1.550130 TACCTTTCCCAGAGCACCGG 61.550 60.000 0.00 0.00 0.00 5.28
3828 5956 0.323629 TTACCTTTCCCAGAGCACCG 59.676 55.000 0.00 0.00 0.00 4.94
3829 5957 2.026262 TCATTACCTTTCCCAGAGCACC 60.026 50.000 0.00 0.00 0.00 5.01
3830 5958 3.350219 TCATTACCTTTCCCAGAGCAC 57.650 47.619 0.00 0.00 0.00 4.40
3831 5959 4.526970 GATTCATTACCTTTCCCAGAGCA 58.473 43.478 0.00 0.00 0.00 4.26
3832 5960 3.885901 GGATTCATTACCTTTCCCAGAGC 59.114 47.826 0.00 0.00 0.00 4.09
3833 5961 5.379706 AGGATTCATTACCTTTCCCAGAG 57.620 43.478 0.00 0.00 31.95 3.35
3834 5962 5.755849 GAAGGATTCATTACCTTTCCCAGA 58.244 41.667 0.00 0.00 46.62 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.