Multiple sequence alignment - TraesCS6B01G066500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G066500 chr6B 100.000 5531 0 0 1 5531 44288856 44283326 0.000000e+00 10214.0
1 TraesCS6B01G066500 chr6B 84.307 1918 205 43 2870 4753 44244557 44242702 0.000000e+00 1786.0
2 TraesCS6B01G066500 chr6B 83.588 1834 188 49 2878 4673 44205977 44204219 0.000000e+00 1615.0
3 TraesCS6B01G066500 chr6B 86.636 1100 93 23 1814 2881 44246919 44245842 0.000000e+00 1168.0
4 TraesCS6B01G066500 chr6B 93.103 377 25 1 5155 5531 44249641 44249266 8.100000e-153 551.0
5 TraesCS6B01G066500 chr6B 92.607 257 18 1 5155 5411 339363208 339363463 8.750000e-98 368.0
6 TraesCS6B01G066500 chr6B 79.252 535 59 25 747 1252 44247865 44247354 5.340000e-85 326.0
7 TraesCS6B01G066500 chr6B 93.443 183 8 3 4915 5097 339362895 339363073 9.130000e-68 268.0
8 TraesCS6B01G066500 chr6B 84.293 191 25 2 4966 5151 44249891 44249701 1.220000e-41 182.0
9 TraesCS6B01G066500 chr6B 100.000 38 0 0 4848 4885 44250071 44250034 2.760000e-08 71.3
10 TraesCS6B01G066500 chrUn 95.412 1482 57 7 2617 4093 94846500 94845025 0.000000e+00 2350.0
11 TraesCS6B01G066500 chrUn 90.075 796 50 18 4093 4883 94844945 94844174 0.000000e+00 1005.0
12 TraesCS6B01G066500 chrUn 89.115 689 40 16 747 1418 94848508 94847838 0.000000e+00 824.0
13 TraesCS6B01G066500 chrUn 97.039 304 9 0 1817 2120 94847356 94847053 3.820000e-141 512.0
14 TraesCS6B01G066500 chrUn 95.620 274 10 1 2117 2390 94846973 94846702 6.580000e-119 438.0
15 TraesCS6B01G066500 chrUn 83.411 428 25 13 1415 1817 94847801 94847395 6.810000e-94 355.0
16 TraesCS6B01G066500 chrUn 92.727 165 10 1 2385 2549 94846660 94846498 2.580000e-58 237.0
17 TraesCS6B01G066500 chrUn 80.453 353 32 12 4431 4772 94841040 94840714 9.260000e-58 235.0
18 TraesCS6B01G066500 chr6A 93.541 1378 60 13 2385 3755 25697265 25695910 0.000000e+00 2025.0
19 TraesCS6B01G066500 chr6A 90.190 948 58 18 2390 3325 25689551 25688627 0.000000e+00 1203.0
20 TraesCS6B01G066500 chr6A 90.408 834 56 11 4053 4885 25693182 25692372 0.000000e+00 1075.0
21 TraesCS6B01G066500 chr6A 85.754 1088 68 34 747 1791 25698896 25697853 0.000000e+00 1070.0
22 TraesCS6B01G066500 chr6A 82.728 1239 141 40 3372 4573 25688508 25687306 0.000000e+00 1035.0
23 TraesCS6B01G066500 chr6A 95.556 495 19 1 1899 2390 25697801 25697307 0.000000e+00 789.0
24 TraesCS6B01G066500 chr6A 88.908 577 59 5 1814 2388 25690174 25689601 0.000000e+00 706.0
25 TraesCS6B01G066500 chr6A 91.746 315 20 4 3738 4051 25693625 25693316 3.060000e-117 433.0
26 TraesCS6B01G066500 chr6A 86.364 396 27 13 872 1262 25690998 25690625 1.850000e-109 407.0
27 TraesCS6B01G066500 chr6A 92.607 257 18 1 5155 5411 315608604 315608859 8.750000e-98 368.0
28 TraesCS6B01G066500 chr5B 88.492 756 62 16 465 1202 493582231 493582979 0.000000e+00 891.0
29 TraesCS6B01G066500 chr1D 92.996 257 17 1 5155 5411 57072625 57072370 1.880000e-99 374.0
30 TraesCS6B01G066500 chr1D 86.957 184 20 4 4915 5097 351920343 351920523 2.610000e-48 204.0
31 TraesCS6B01G066500 chr7D 92.607 257 18 1 5155 5411 58888649 58888904 8.750000e-98 368.0
32 TraesCS6B01G066500 chr7D 91.829 257 20 1 5155 5411 557080585 557080840 1.890000e-94 357.0
33 TraesCS6B01G066500 chr7D 93.989 183 11 0 4915 5097 58888332 58888514 1.520000e-70 278.0
34 TraesCS6B01G066500 chr7D 91.803 183 15 0 4915 5097 557080269 557080451 7.110000e-64 255.0
35 TraesCS6B01G066500 chr7D 93.878 49 2 1 5103 5151 557080478 557080525 7.690000e-09 73.1
36 TraesCS6B01G066500 chr5A 92.607 257 18 1 5155 5411 17601803 17602058 8.750000e-98 368.0
37 TraesCS6B01G066500 chr5A 91.797 256 20 1 5156 5411 635883883 635883629 6.810000e-94 355.0
38 TraesCS6B01G066500 chr5A 91.444 187 16 0 4915 5101 635884201 635884015 1.980000e-64 257.0
39 TraesCS6B01G066500 chr7B 91.829 257 20 1 5155 5411 604665016 604665271 1.890000e-94 357.0
40 TraesCS6B01G066500 chr3D 89.451 237 25 0 4915 5151 84115007 84114771 3.240000e-77 300.0
41 TraesCS6B01G066500 chr3D 92.896 183 13 0 4915 5097 76942192 76942374 3.280000e-67 267.0
42 TraesCS6B01G066500 chr3D 72.170 636 142 25 60 679 269180352 269180968 1.590000e-35 161.0
43 TraesCS6B01G066500 chr4B 93.370 181 12 0 4916 5096 108415309 108415129 9.130000e-68 268.0
44 TraesCS6B01G066500 chr4B 88.554 166 19 0 4915 5080 102456270 102456105 9.400000e-48 202.0
45 TraesCS6B01G066500 chr4B 92.000 50 3 1 5103 5151 108415101 108415052 9.940000e-08 69.4
46 TraesCS6B01G066500 chr6D 92.896 183 12 1 4915 5097 227392976 227393157 1.180000e-66 265.0
47 TraesCS6B01G066500 chr6D 93.333 45 3 0 5104 5148 227393185 227393229 3.580000e-07 67.6
48 TraesCS6B01G066500 chr7A 90.674 193 17 1 4915 5107 63483510 63483701 7.110000e-64 255.0
49 TraesCS6B01G066500 chr7A 74.412 680 135 29 49 712 592080512 592079856 7.110000e-64 255.0
50 TraesCS6B01G066500 chr3B 74.609 575 121 21 49 607 200476297 200475732 4.310000e-56 230.0
51 TraesCS6B01G066500 chr3B 73.883 582 128 18 37 607 369913831 369913263 1.560000e-50 211.0
52 TraesCS6B01G066500 chr3B 73.359 518 105 23 176 677 156073306 156073806 1.590000e-35 161.0
53 TraesCS6B01G066500 chr3A 83.984 256 20 7 4915 5149 100428035 100427780 5.570000e-55 226.0
54 TraesCS6B01G066500 chr2B 82.937 252 25 12 4915 5151 567045665 567045913 1.560000e-50 211.0
55 TraesCS6B01G066500 chr2B 75.281 356 73 10 44 395 486085102 486084758 7.420000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G066500 chr6B 44283326 44288856 5530 True 10214.000000 10214 100.000000 1 5531 1 chr6B.!!$R2 5530
1 TraesCS6B01G066500 chr6B 44204219 44205977 1758 True 1615.000000 1615 83.588000 2878 4673 1 chr6B.!!$R1 1795
2 TraesCS6B01G066500 chr6B 44242702 44250071 7369 True 680.716667 1786 87.931833 747 5531 6 chr6B.!!$R3 4784
3 TraesCS6B01G066500 chr6B 339362895 339363463 568 False 318.000000 368 93.025000 4915 5411 2 chr6B.!!$F1 496
4 TraesCS6B01G066500 chrUn 94840714 94848508 7794 True 744.500000 2350 90.481500 747 4883 8 chrUn.!!$R1 4136
5 TraesCS6B01G066500 chr6A 25687306 25698896 11590 True 971.444444 2025 89.466111 747 4885 9 chr6A.!!$R1 4138
6 TraesCS6B01G066500 chr5B 493582231 493582979 748 False 891.000000 891 88.492000 465 1202 1 chr5B.!!$F1 737
7 TraesCS6B01G066500 chr7D 58888332 58888904 572 False 323.000000 368 93.298000 4915 5411 2 chr7D.!!$F1 496
8 TraesCS6B01G066500 chr7D 557080269 557080840 571 False 228.366667 357 92.503333 4915 5411 3 chr7D.!!$F2 496
9 TraesCS6B01G066500 chr5A 635883629 635884201 572 True 306.000000 355 91.620500 4915 5411 2 chr5A.!!$R1 496
10 TraesCS6B01G066500 chr7A 592079856 592080512 656 True 255.000000 255 74.412000 49 712 1 chr7A.!!$R1 663
11 TraesCS6B01G066500 chr3B 200475732 200476297 565 True 230.000000 230 74.609000 49 607 1 chr3B.!!$R1 558
12 TraesCS6B01G066500 chr3B 369913263 369913831 568 True 211.000000 211 73.883000 37 607 1 chr3B.!!$R2 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
20 21 0.039074 GTGACTCCTCCAGTGACGTG 60.039 60.000 0.00 0.00 34.41 4.49 F
34 35 0.179215 GACGTGTGCTTGCATACTGC 60.179 55.000 17.65 7.89 45.29 4.40 F
136 140 0.664761 CCATCATGATCGTTGTGGCC 59.335 55.000 4.86 0.00 0.00 5.36 F
148 152 0.776810 TTGTGGCCCCAAAGAGATCA 59.223 50.000 0.00 0.00 0.00 2.92 F
2041 3706 0.743701 AGGCTCATTTCAGCAGCTCG 60.744 55.000 0.00 0.00 41.65 5.03 F
2578 4386 1.064240 TGCAATCAGCCATCCATCAGT 60.064 47.619 0.00 0.00 44.83 3.41 F
4245 14358 0.736325 CCTTGGAGACGTTGCTACCG 60.736 60.000 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1895 3560 0.611200 TAAGCGCTTTGGCAGGAGTA 59.389 50.0 30.13 2.35 38.60 2.59 R
1931 3596 6.575162 AGGTCAACAAATGAAACAGATACC 57.425 37.5 0.00 0.00 40.50 2.73 R
2041 3706 0.618458 TATCAACACCTGGTGGGAGC 59.382 55.0 29.05 0.00 37.94 4.70 R
2147 3895 6.327934 CAATGACATGGGTTCTCAAGATTTC 58.672 40.0 0.00 0.00 0.00 2.17 R
2888 4764 0.472471 TGGAAGAAAGAGTTGCCGGT 59.528 50.0 1.90 0.00 0.00 5.28 R
4379 14492 0.321919 GGCCACATCTGTCTCTTGCA 60.322 55.0 0.00 0.00 0.00 4.08 R
5098 18788 0.106149 GGAGTTGGAACCAGTGTCGT 59.894 55.0 0.00 0.00 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.342478 GTGACTCCTCCAGTGACGT 58.658 57.895 0.00 0.00 34.41 4.34
20 21 0.039074 GTGACTCCTCCAGTGACGTG 60.039 60.000 0.00 0.00 34.41 4.49
21 22 0.467474 TGACTCCTCCAGTGACGTGT 60.467 55.000 0.00 0.00 34.41 4.49
22 23 0.039074 GACTCCTCCAGTGACGTGTG 60.039 60.000 0.00 0.00 34.41 3.82
23 24 1.373497 CTCCTCCAGTGACGTGTGC 60.373 63.158 0.00 0.00 0.00 4.57
24 25 1.810606 CTCCTCCAGTGACGTGTGCT 61.811 60.000 0.00 0.00 0.00 4.40
25 26 1.069765 CCTCCAGTGACGTGTGCTT 59.930 57.895 0.00 0.00 0.00 3.91
26 27 1.224069 CCTCCAGTGACGTGTGCTTG 61.224 60.000 0.00 0.00 0.00 4.01
27 28 1.835483 CTCCAGTGACGTGTGCTTGC 61.835 60.000 0.00 0.00 0.00 4.01
28 29 2.179547 CCAGTGACGTGTGCTTGCA 61.180 57.895 0.00 0.00 0.00 4.08
29 30 1.509644 CCAGTGACGTGTGCTTGCAT 61.510 55.000 0.00 0.00 0.00 3.96
30 31 1.147473 CAGTGACGTGTGCTTGCATA 58.853 50.000 0.00 0.00 0.00 3.14
31 32 1.136252 CAGTGACGTGTGCTTGCATAC 60.136 52.381 11.58 11.58 0.00 2.39
32 33 1.148310 GTGACGTGTGCTTGCATACT 58.852 50.000 17.65 7.32 0.00 2.12
33 34 1.136252 GTGACGTGTGCTTGCATACTG 60.136 52.381 17.65 13.79 0.00 2.74
34 35 0.179215 GACGTGTGCTTGCATACTGC 60.179 55.000 17.65 7.89 45.29 4.40
57 58 2.300152 CTCAGCTTTGGAGGTACACAGA 59.700 50.000 0.00 0.00 31.08 3.41
89 91 2.516227 TGTGAACACACTTTTGGGGA 57.484 45.000 3.39 0.00 36.21 4.81
93 95 3.949113 GTGAACACACTTTTGGGGAACTA 59.051 43.478 0.00 0.00 0.00 2.24
131 135 4.083643 GCTAATGGTCCATCATGATCGTTG 60.084 45.833 4.86 0.00 0.00 4.10
133 137 2.631267 TGGTCCATCATGATCGTTGTG 58.369 47.619 4.86 0.00 0.00 3.33
136 140 0.664761 CCATCATGATCGTTGTGGCC 59.335 55.000 4.86 0.00 0.00 5.36
139 143 1.378382 CATGATCGTTGTGGCCCCA 60.378 57.895 0.00 0.00 0.00 4.96
148 152 0.776810 TTGTGGCCCCAAAGAGATCA 59.223 50.000 0.00 0.00 0.00 2.92
168 172 6.608405 AGATCATCACCAAGGATTTGCAAATA 59.392 34.615 24.15 7.04 32.79 1.40
172 176 4.021544 TCACCAAGGATTTGCAAATACACC 60.022 41.667 31.15 23.73 31.40 4.16
174 178 3.056891 CCAAGGATTTGCAAATACACCGT 60.057 43.478 31.15 20.17 31.40 4.83
327 340 8.393395 GCAAGAGTCGATGCAAAAATATTTTA 57.607 30.769 13.68 0.00 42.12 1.52
328 341 8.526681 GCAAGAGTCGATGCAAAAATATTTTAG 58.473 33.333 13.68 2.91 42.12 1.85
335 348 9.202273 TCGATGCAAAAATATTTTAGTTGCTTT 57.798 25.926 25.32 17.50 34.31 3.51
367 380 1.135112 ATGTCAGCAACATGCAGCATG 60.135 47.619 30.34 30.34 47.00 4.06
389 402 8.642908 CATGTGTATTTGAATTCTCATGCATT 57.357 30.769 7.05 0.00 33.87 3.56
395 408 7.827819 ATTTGAATTCTCATGCATTGACAAG 57.172 32.000 7.05 0.00 0.00 3.16
403 416 3.962063 TCATGCATTGACAAGCCCATAAT 59.038 39.130 0.00 0.00 0.00 1.28
414 427 3.831642 AGCCCATAATTCCATATGCCA 57.168 42.857 0.00 0.00 32.93 4.92
416 429 4.491675 AGCCCATAATTCCATATGCCAAA 58.508 39.130 0.00 0.00 32.93 3.28
418 431 5.046159 AGCCCATAATTCCATATGCCAAATG 60.046 40.000 0.00 0.00 32.93 2.32
425 438 5.710513 TTCCATATGCCAAATGATAGCAC 57.289 39.130 0.00 0.00 39.77 4.40
491 506 5.333645 CCTCGAATAGCATGCAACAAGTATC 60.334 44.000 21.98 5.44 0.00 2.24
505 520 8.394877 TGCAACAAGTATCTAACCATTTAATCG 58.605 33.333 0.00 0.00 0.00 3.34
538 553 9.349713 AGTAATTCACAATACAAGAGTCCAAAA 57.650 29.630 0.00 0.00 0.00 2.44
561 576 6.529084 AATGTGGATGGATAGGGTAATTGA 57.471 37.500 0.00 0.00 0.00 2.57
604 622 7.550196 TCGGTCAATTACCCTAAACTTTCATAC 59.450 37.037 0.00 0.00 46.62 2.39
607 625 6.316890 TCAATTACCCTAAACTTTCATACGCC 59.683 38.462 0.00 0.00 0.00 5.68
609 627 4.230745 ACCCTAAACTTTCATACGCCAT 57.769 40.909 0.00 0.00 0.00 4.40
614 632 5.354234 CCTAAACTTTCATACGCCATGTCTT 59.646 40.000 0.00 0.00 35.96 3.01
622 640 7.652300 TTCATACGCCATGTCTTATGTTATC 57.348 36.000 0.89 0.00 35.96 1.75
625 643 7.713073 TCATACGCCATGTCTTATGTTATCAAA 59.287 33.333 0.89 0.00 35.96 2.69
630 649 7.914871 CGCCATGTCTTATGTTATCAAATTTCA 59.085 33.333 0.00 0.00 0.00 2.69
634 653 8.039603 TGTCTTATGTTATCAAATTTCAGCGT 57.960 30.769 0.00 0.00 0.00 5.07
638 657 8.839947 TTATGTTATCAAATTTCAGCGTCATG 57.160 30.769 0.00 0.00 0.00 3.07
663 686 8.414778 TGTGCAATTGCTGATATTCATAATTCA 58.585 29.630 29.37 1.54 42.66 2.57
679 702 2.031012 CAGCTCCGCACCTTCACA 59.969 61.111 0.00 0.00 0.00 3.58
715 738 4.399303 AGCCGAATAAGTGAAAATTCCAGG 59.601 41.667 0.00 0.00 0.00 4.45
730 753 1.142748 CAGGAGAGGCCACGATGTC 59.857 63.158 5.01 0.00 40.02 3.06
814 2279 1.047801 AAAACAAAGCGGGGCAGAAT 58.952 45.000 0.00 0.00 0.00 2.40
817 2299 2.043953 AAAGCGGGGCAGAATCCC 60.044 61.111 0.00 0.00 45.80 3.85
988 2489 3.274586 CGATACGCCGTCCTCCGA 61.275 66.667 0.00 0.00 39.56 4.55
1157 2658 3.370798 TGGTAACATGCCATTGCCA 57.629 47.368 0.98 0.98 46.17 4.92
1204 2705 1.384222 AAATCCCAAATCTCGGCGCC 61.384 55.000 19.07 19.07 0.00 6.53
1253 2754 3.990469 GGATCACGGTTGCTGATATGTAG 59.010 47.826 0.00 0.00 0.00 2.74
1277 2778 2.398252 TCAGATTGCTTGCTCTCCTG 57.602 50.000 0.00 0.00 0.00 3.86
1294 2795 4.018415 TCTCCTGGGAATTTTAGACCCTTG 60.018 45.833 0.00 0.00 43.59 3.61
1297 2798 3.763897 CTGGGAATTTTAGACCCTTGGTG 59.236 47.826 0.00 0.00 43.59 4.17
1364 2868 4.424842 TGGATTTTAAGGCAAACCCTCAT 58.575 39.130 0.00 0.00 45.62 2.90
1406 2963 6.117975 TCTTGCATAATATGAGCATGGAGA 57.882 37.500 4.14 0.00 38.19 3.71
1456 3053 1.281867 TGCTCCACATCCTGTTTAGGG 59.718 52.381 0.00 0.00 44.70 3.53
1472 3069 5.763204 TGTTTAGGGTAAGAAGCTGAGTTTG 59.237 40.000 0.00 0.00 0.00 2.93
1473 3070 2.784347 AGGGTAAGAAGCTGAGTTTGC 58.216 47.619 0.00 0.00 0.00 3.68
1474 3071 2.373502 AGGGTAAGAAGCTGAGTTTGCT 59.626 45.455 0.00 0.00 43.32 3.91
1475 3072 2.485814 GGGTAAGAAGCTGAGTTTGCTG 59.514 50.000 0.00 0.00 41.03 4.41
1476 3073 2.095516 GGTAAGAAGCTGAGTTTGCTGC 60.096 50.000 0.00 0.00 41.03 5.25
1477 3074 1.683943 AAGAAGCTGAGTTTGCTGCA 58.316 45.000 0.00 0.00 41.03 4.41
1478 3075 1.236628 AGAAGCTGAGTTTGCTGCAG 58.763 50.000 10.11 10.11 41.03 4.41
1506 3103 2.295349 GGCATGCTCTCCATATGTTTGG 59.705 50.000 18.92 0.00 38.18 3.28
1556 3153 5.982465 TTTTACAAATTTCACTTGCTGCC 57.018 34.783 0.00 0.00 0.00 4.85
1573 3170 3.731867 GCTGCCGTATGAAATTCTTGTGG 60.732 47.826 0.00 0.00 0.00 4.17
1575 3172 3.823873 TGCCGTATGAAATTCTTGTGGTT 59.176 39.130 0.00 0.00 0.00 3.67
1634 3245 4.513318 GCAGTCTTATCTTAATCCTGCCAC 59.487 45.833 0.00 0.00 38.25 5.01
1735 3358 5.123027 GGTCAGAGATTTTGTTGCTAAGAGG 59.877 44.000 0.00 0.00 0.00 3.69
1742 3365 4.568072 TTTGTTGCTAAGAGGCCATCTA 57.432 40.909 5.01 0.00 37.23 1.98
1791 3416 3.065655 GCTGATAGCCATGTGAGATCAC 58.934 50.000 6.01 6.01 40.29 3.06
1794 3419 3.708121 TGATAGCCATGTGAGATCACTGT 59.292 43.478 13.74 0.78 46.55 3.55
1931 3596 3.282885 GCTTATCTTCCTTTCCACAGGG 58.717 50.000 0.00 0.00 34.24 4.45
1947 3612 4.158394 CCACAGGGGTATCTGTTTCATTTG 59.842 45.833 0.00 0.00 44.74 2.32
2041 3706 0.743701 AGGCTCATTTCAGCAGCTCG 60.744 55.000 0.00 0.00 41.65 5.03
2167 3915 7.201767 CCTTATGAAATCTTGAGAACCCATGTC 60.202 40.741 0.00 0.00 0.00 3.06
2291 4041 3.565902 GGCCATGGAATCTAACAGTAAGC 59.434 47.826 18.40 0.00 0.00 3.09
2297 4047 6.808321 TGGAATCTAACAGTAAGCCTATGT 57.192 37.500 0.00 0.00 0.00 2.29
2334 4084 7.961283 ACTTCTGTTTAGACACGTTTTCTTTTC 59.039 33.333 1.84 0.00 31.21 2.29
2432 4239 7.550906 GTCTGCTGGAAATACTGTTAGAGATTT 59.449 37.037 0.00 0.00 0.00 2.17
2433 4240 8.758829 TCTGCTGGAAATACTGTTAGAGATTTA 58.241 33.333 0.00 0.00 0.00 1.40
2552 4360 5.070313 ACCACACATTTTGTAATCCTTGCTT 59.930 36.000 0.00 0.00 35.67 3.91
2553 4361 6.266558 ACCACACATTTTGTAATCCTTGCTTA 59.733 34.615 0.00 0.00 35.67 3.09
2578 4386 1.064240 TGCAATCAGCCATCCATCAGT 60.064 47.619 0.00 0.00 44.83 3.41
2581 4389 2.343484 ATCAGCCATCCATCAGTGTG 57.657 50.000 0.00 0.00 0.00 3.82
2584 4392 1.450134 GCCATCCATCAGTGTGCGA 60.450 57.895 0.00 0.00 0.00 5.10
2588 4396 2.804527 CCATCCATCAGTGTGCGAATAG 59.195 50.000 0.00 0.00 0.00 1.73
2596 4404 5.386958 TCAGTGTGCGAATAGTAGAAACT 57.613 39.130 0.00 0.00 39.91 2.66
2698 4572 5.595133 TCATTTGCATGAATCTGCTATTCCA 59.405 36.000 0.00 0.09 42.75 3.53
2704 4578 6.999871 TGCATGAATCTGCTATTCCATTTCTA 59.000 34.615 0.00 0.00 42.75 2.10
2705 4579 7.040892 TGCATGAATCTGCTATTCCATTTCTAC 60.041 37.037 0.00 0.00 42.75 2.59
2724 4600 5.942961 TCTACATGTGGTTTTCCCTGTTAA 58.057 37.500 9.11 0.00 39.73 2.01
2883 4759 4.308265 AGAGGTTCGTTTTGAGAACTAGC 58.692 43.478 8.66 0.53 45.20 3.42
2884 4760 3.400255 AGGTTCGTTTTGAGAACTAGCC 58.600 45.455 8.66 0.00 45.20 3.93
2888 4764 5.467735 GGTTCGTTTTGAGAACTAGCCTTAA 59.532 40.000 8.66 0.00 45.20 1.85
2889 4765 6.361114 GTTCGTTTTGAGAACTAGCCTTAAC 58.639 40.000 2.25 0.00 43.24 2.01
2921 12814 9.007901 ACTCTTTCTTCCAATCTCAAACAATAG 57.992 33.333 0.00 0.00 0.00 1.73
3066 12959 6.145535 CAGAAACAACCTTTCTGTATGAAGC 58.854 40.000 12.68 0.00 46.17 3.86
3068 12961 5.438761 AACAACCTTTCTGTATGAAGCAC 57.561 39.130 0.00 0.00 35.89 4.40
3092 12985 5.411669 CACCTAGTTTCTACCATTTGTGGAC 59.588 44.000 0.73 0.00 33.72 4.02
3142 13042 3.246699 GTGCTTTGACTACAGCGTGTTAA 59.753 43.478 0.00 0.00 0.00 2.01
3325 13314 6.203530 TGCTCTTCTGTCATTGAACTGTTTAG 59.796 38.462 0.00 0.00 0.00 1.85
3452 13445 9.472361 GTAGAACTTCACATACACTTTCAAGTA 57.528 33.333 0.00 0.00 37.08 2.24
3507 13500 8.716619 GTCGTATGACATTAAGAGACATCTAC 57.283 38.462 10.30 0.00 44.82 2.59
3528 13521 9.702726 ATCTACGATAAAAATGAATTTGTGTCG 57.297 29.630 18.12 18.12 46.97 4.35
3564 13559 6.602803 TCACCATCTGCTCTGATAGATCTATC 59.397 42.308 28.73 28.73 41.67 2.08
3693 13688 6.875076 AGTGTATCCTATATAAATCGGCCAC 58.125 40.000 2.24 0.00 0.00 5.01
3765 13760 7.643569 TGTTATCATTTGAATGCCAGTATGT 57.356 32.000 0.00 0.00 36.36 2.29
3801 13796 5.590530 TTTGCTTGTTGTAATCACCAACT 57.409 34.783 5.07 0.00 42.09 3.16
3898 13894 6.375174 AGAAGCATGCACATGTACATTTCTTA 59.625 34.615 21.98 0.00 40.80 2.10
4245 14358 0.736325 CCTTGGAGACGTTGCTACCG 60.736 60.000 0.00 0.00 0.00 4.02
4293 14406 2.514824 GCTGCCGATCCTGAACCC 60.515 66.667 0.00 0.00 0.00 4.11
4325 14438 3.382832 AGGCTCAGAACCCGACGG 61.383 66.667 6.99 6.99 0.00 4.79
4455 18135 1.675552 TCGAGCTCGACATGGACATA 58.324 50.000 33.84 8.80 44.22 2.29
4484 18164 4.268720 GGTGGCCAACAACCTGAA 57.731 55.556 18.33 0.00 0.00 3.02
4499 18179 1.209504 CCTGAAGAACCCCGAATGCTA 59.790 52.381 0.00 0.00 0.00 3.49
4519 18199 4.556898 GCTACCTCCATGTCTGTGTATACG 60.557 50.000 0.00 0.00 0.00 3.06
4524 18204 3.118920 TCCATGTCTGTGTATACGTTGGG 60.119 47.826 0.00 0.00 0.00 4.12
4538 18218 1.815613 CGTTGGGGCATGAATGTAACA 59.184 47.619 0.00 0.00 0.00 2.41
4545 18225 3.119849 GGGCATGAATGTAACAGTGACAC 60.120 47.826 0.00 0.00 0.00 3.67
4581 18261 4.646572 GAAAGGTTAGATGCCATAGGAGG 58.353 47.826 0.00 0.00 0.00 4.30
4582 18262 2.625639 AGGTTAGATGCCATAGGAGGG 58.374 52.381 0.00 0.00 0.00 4.30
4584 18264 1.630878 GTTAGATGCCATAGGAGGGGG 59.369 57.143 0.00 0.00 0.00 5.40
4586 18266 0.178879 AGATGCCATAGGAGGGGGAG 60.179 60.000 0.00 0.00 0.00 4.30
4587 18267 0.474660 GATGCCATAGGAGGGGGAGT 60.475 60.000 0.00 0.00 0.00 3.85
4588 18268 0.769776 ATGCCATAGGAGGGGGAGTG 60.770 60.000 0.00 0.00 0.00 3.51
4589 18269 2.823758 GCCATAGGAGGGGGAGTGC 61.824 68.421 0.00 0.00 0.00 4.40
4590 18270 2.150051 CCATAGGAGGGGGAGTGCC 61.150 68.421 0.00 0.00 0.00 5.01
4591 18271 1.074167 CATAGGAGGGGGAGTGCCT 60.074 63.158 0.00 0.00 34.56 4.75
4592 18272 0.695803 CATAGGAGGGGGAGTGCCTT 60.696 60.000 0.00 0.00 32.04 4.35
4593 18273 0.400670 ATAGGAGGGGGAGTGCCTTC 60.401 60.000 0.00 0.00 32.04 3.46
4594 18274 2.547123 TAGGAGGGGGAGTGCCTTCC 62.547 65.000 14.17 14.17 36.46 3.46
4595 18275 2.610859 GAGGGGGAGTGCCTTCCA 60.611 66.667 0.00 0.00 39.09 3.53
4596 18276 2.612115 AGGGGGAGTGCCTTCCAG 60.612 66.667 0.00 0.00 39.09 3.86
4621 18301 1.304713 AATGGCCTGCTGGTCTTGG 60.305 57.895 15.82 0.00 39.11 3.61
4623 18303 2.085343 ATGGCCTGCTGGTCTTGGTT 62.085 55.000 15.82 0.00 39.11 3.67
4624 18304 1.973812 GGCCTGCTGGTCTTGGTTC 60.974 63.158 11.69 0.00 34.49 3.62
4629 18309 1.610522 CTGCTGGTCTTGGTTCTTTGG 59.389 52.381 0.00 0.00 0.00 3.28
4636 18316 3.949113 GGTCTTGGTTCTTTGGTTGTACA 59.051 43.478 0.00 0.00 0.00 2.90
4637 18317 4.583073 GGTCTTGGTTCTTTGGTTGTACAT 59.417 41.667 0.00 0.00 0.00 2.29
4668 18348 4.330620 TGGTAAAATCGTGATCGTTTAGGC 59.669 41.667 0.00 0.00 38.33 3.93
4694 18374 2.482664 CGATGTAAGATCTGCAGCCACT 60.483 50.000 9.47 5.08 0.00 4.00
4708 18398 1.826054 CCACTGGTGCGGGTTTGAA 60.826 57.895 0.00 0.00 0.00 2.69
4716 18406 1.735571 GTGCGGGTTTGAATACGATGT 59.264 47.619 0.00 0.00 0.00 3.06
4747 18437 6.406624 GGAATGATTCCTGCTTCACAATTCAT 60.407 38.462 16.79 0.00 46.57 2.57
4755 18445 3.508402 TGCTTCACAATTCATGATGCTGT 59.492 39.130 19.70 0.00 43.86 4.40
4756 18446 4.701171 TGCTTCACAATTCATGATGCTGTA 59.299 37.500 19.70 5.63 43.86 2.74
4757 18447 5.032863 GCTTCACAATTCATGATGCTGTAC 58.967 41.667 15.06 0.00 41.59 2.90
4759 18449 5.806366 TCACAATTCATGATGCTGTACTG 57.194 39.130 0.00 0.00 0.00 2.74
4772 18462 2.170607 GCTGTACTGTGGTGGTATGGAT 59.829 50.000 1.46 0.00 0.00 3.41
4773 18463 3.386726 GCTGTACTGTGGTGGTATGGATA 59.613 47.826 1.46 0.00 0.00 2.59
4774 18464 4.040461 GCTGTACTGTGGTGGTATGGATAT 59.960 45.833 1.46 0.00 0.00 1.63
4775 18465 5.541845 CTGTACTGTGGTGGTATGGATATG 58.458 45.833 0.00 0.00 0.00 1.78
4776 18466 4.346709 TGTACTGTGGTGGTATGGATATGG 59.653 45.833 0.00 0.00 0.00 2.74
4777 18467 3.664320 ACTGTGGTGGTATGGATATGGA 58.336 45.455 0.00 0.00 0.00 3.41
4778 18468 4.044308 ACTGTGGTGGTATGGATATGGAA 58.956 43.478 0.00 0.00 0.00 3.53
4779 18469 4.665009 ACTGTGGTGGTATGGATATGGAAT 59.335 41.667 0.00 0.00 0.00 3.01
4780 18470 5.134339 ACTGTGGTGGTATGGATATGGAATT 59.866 40.000 0.00 0.00 0.00 2.17
4781 18471 5.384336 TGTGGTGGTATGGATATGGAATTG 58.616 41.667 0.00 0.00 0.00 2.32
4782 18472 4.218417 GTGGTGGTATGGATATGGAATTGC 59.782 45.833 0.00 0.00 0.00 3.56
4783 18473 3.440173 GGTGGTATGGATATGGAATTGCG 59.560 47.826 0.00 0.00 0.00 4.85
4784 18474 3.440173 GTGGTATGGATATGGAATTGCGG 59.560 47.826 0.00 0.00 0.00 5.69
4785 18475 2.423538 GGTATGGATATGGAATTGCGGC 59.576 50.000 0.00 0.00 0.00 6.53
4786 18476 2.291209 ATGGATATGGAATTGCGGCA 57.709 45.000 0.00 0.00 0.00 5.69
4787 18477 1.608055 TGGATATGGAATTGCGGCAG 58.392 50.000 1.67 0.00 0.00 4.85
4788 18478 0.883833 GGATATGGAATTGCGGCAGG 59.116 55.000 1.67 0.00 0.00 4.85
4789 18479 1.545428 GGATATGGAATTGCGGCAGGA 60.545 52.381 1.67 0.00 0.00 3.86
4790 18480 2.229792 GATATGGAATTGCGGCAGGAA 58.770 47.619 1.67 0.00 0.00 3.36
4791 18481 1.679139 TATGGAATTGCGGCAGGAAG 58.321 50.000 1.67 0.00 0.00 3.46
4792 18482 0.323725 ATGGAATTGCGGCAGGAAGT 60.324 50.000 1.67 0.00 0.00 3.01
4793 18483 0.539438 TGGAATTGCGGCAGGAAGTT 60.539 50.000 1.67 0.00 0.00 2.66
4794 18484 0.109132 GGAATTGCGGCAGGAAGTTG 60.109 55.000 1.67 0.00 0.00 3.16
4795 18485 0.109132 GAATTGCGGCAGGAAGTTGG 60.109 55.000 1.67 0.00 0.00 3.77
4796 18486 1.535204 AATTGCGGCAGGAAGTTGGG 61.535 55.000 1.67 0.00 0.00 4.12
4797 18487 2.424842 ATTGCGGCAGGAAGTTGGGA 62.425 55.000 1.67 0.00 0.00 4.37
4798 18488 2.282180 GCGGCAGGAAGTTGGGAA 60.282 61.111 0.00 0.00 0.00 3.97
4799 18489 2.335712 GCGGCAGGAAGTTGGGAAG 61.336 63.158 0.00 0.00 0.00 3.46
4800 18490 1.374947 CGGCAGGAAGTTGGGAAGA 59.625 57.895 0.00 0.00 0.00 2.87
4801 18491 0.250727 CGGCAGGAAGTTGGGAAGAA 60.251 55.000 0.00 0.00 0.00 2.52
4802 18492 1.539157 GGCAGGAAGTTGGGAAGAAG 58.461 55.000 0.00 0.00 0.00 2.85
4803 18493 1.073923 GGCAGGAAGTTGGGAAGAAGA 59.926 52.381 0.00 0.00 0.00 2.87
4804 18494 2.431454 GCAGGAAGTTGGGAAGAAGAG 58.569 52.381 0.00 0.00 0.00 2.85
4805 18495 2.224646 GCAGGAAGTTGGGAAGAAGAGT 60.225 50.000 0.00 0.00 0.00 3.24
4806 18496 3.008049 GCAGGAAGTTGGGAAGAAGAGTA 59.992 47.826 0.00 0.00 0.00 2.59
4807 18497 4.323868 GCAGGAAGTTGGGAAGAAGAGTAT 60.324 45.833 0.00 0.00 0.00 2.12
4808 18498 5.804771 GCAGGAAGTTGGGAAGAAGAGTATT 60.805 44.000 0.00 0.00 0.00 1.89
4809 18499 5.877564 CAGGAAGTTGGGAAGAAGAGTATTC 59.122 44.000 0.00 0.00 0.00 1.75
4810 18500 5.548056 AGGAAGTTGGGAAGAAGAGTATTCA 59.452 40.000 0.00 0.00 0.00 2.57
4811 18501 5.877564 GGAAGTTGGGAAGAAGAGTATTCAG 59.122 44.000 0.00 0.00 0.00 3.02
4812 18502 6.441088 AAGTTGGGAAGAAGAGTATTCAGT 57.559 37.500 0.00 0.00 0.00 3.41
4813 18503 5.799213 AGTTGGGAAGAAGAGTATTCAGTG 58.201 41.667 0.00 0.00 0.00 3.66
4814 18504 4.207891 TGGGAAGAAGAGTATTCAGTGC 57.792 45.455 0.00 0.00 0.00 4.40
4815 18505 3.582647 TGGGAAGAAGAGTATTCAGTGCA 59.417 43.478 0.00 0.00 0.00 4.57
4816 18506 4.225942 TGGGAAGAAGAGTATTCAGTGCAT 59.774 41.667 0.00 0.00 0.00 3.96
4817 18507 4.574013 GGGAAGAAGAGTATTCAGTGCATG 59.426 45.833 0.00 0.00 0.00 4.06
4818 18508 4.574013 GGAAGAAGAGTATTCAGTGCATGG 59.426 45.833 0.00 0.00 0.00 3.66
4819 18509 4.833478 AGAAGAGTATTCAGTGCATGGT 57.167 40.909 0.00 0.00 0.00 3.55
4820 18510 5.171339 AGAAGAGTATTCAGTGCATGGTT 57.829 39.130 0.00 0.00 0.00 3.67
4821 18511 6.299805 AGAAGAGTATTCAGTGCATGGTTA 57.700 37.500 0.00 0.00 0.00 2.85
4822 18512 6.893583 AGAAGAGTATTCAGTGCATGGTTAT 58.106 36.000 0.00 0.00 0.00 1.89
4823 18513 6.765036 AGAAGAGTATTCAGTGCATGGTTATG 59.235 38.462 0.00 0.00 37.36 1.90
4824 18514 5.371526 AGAGTATTCAGTGCATGGTTATGG 58.628 41.667 0.00 0.00 34.79 2.74
4825 18515 5.104360 AGAGTATTCAGTGCATGGTTATGGT 60.104 40.000 0.00 0.00 34.79 3.55
4826 18516 4.883585 AGTATTCAGTGCATGGTTATGGTG 59.116 41.667 0.00 0.00 34.79 4.17
4827 18517 2.877097 TCAGTGCATGGTTATGGTGT 57.123 45.000 0.00 0.00 34.79 4.16
4828 18518 2.435422 TCAGTGCATGGTTATGGTGTG 58.565 47.619 0.00 0.00 34.79 3.82
4829 18519 2.161855 CAGTGCATGGTTATGGTGTGT 58.838 47.619 0.00 0.00 34.79 3.72
4830 18520 3.008485 TCAGTGCATGGTTATGGTGTGTA 59.992 43.478 0.00 0.00 34.79 2.90
4831 18521 3.755905 CAGTGCATGGTTATGGTGTGTAA 59.244 43.478 0.00 0.00 34.79 2.41
4832 18522 4.398988 CAGTGCATGGTTATGGTGTGTAAT 59.601 41.667 0.00 0.00 34.79 1.89
4833 18523 5.016173 AGTGCATGGTTATGGTGTGTAATT 58.984 37.500 0.00 0.00 34.79 1.40
4834 18524 5.125417 AGTGCATGGTTATGGTGTGTAATTC 59.875 40.000 0.00 0.00 34.79 2.17
4835 18525 5.012893 TGCATGGTTATGGTGTGTAATTCA 58.987 37.500 0.00 0.00 34.79 2.57
4836 18526 5.655974 TGCATGGTTATGGTGTGTAATTCAT 59.344 36.000 0.00 0.00 34.79 2.57
4837 18527 6.830838 TGCATGGTTATGGTGTGTAATTCATA 59.169 34.615 0.00 0.00 34.79 2.15
4838 18528 7.505248 TGCATGGTTATGGTGTGTAATTCATAT 59.495 33.333 0.00 0.00 34.79 1.78
4839 18529 7.809331 GCATGGTTATGGTGTGTAATTCATATG 59.191 37.037 0.00 0.00 34.79 1.78
4840 18530 9.065798 CATGGTTATGGTGTGTAATTCATATGA 57.934 33.333 0.00 0.00 0.00 2.15
4841 18531 8.445275 TGGTTATGGTGTGTAATTCATATGAC 57.555 34.615 4.48 0.00 0.00 3.06
4842 18532 8.049721 TGGTTATGGTGTGTAATTCATATGACA 58.950 33.333 4.48 0.00 0.00 3.58
4843 18533 9.066892 GGTTATGGTGTGTAATTCATATGACAT 57.933 33.333 4.48 5.05 27.78 3.06
4846 18536 8.613060 ATGGTGTGTAATTCATATGACATCTC 57.387 34.615 4.48 0.00 27.78 2.75
4847 18537 7.795047 TGGTGTGTAATTCATATGACATCTCT 58.205 34.615 4.48 0.00 27.78 3.10
4848 18538 7.712205 TGGTGTGTAATTCATATGACATCTCTG 59.288 37.037 4.48 0.00 27.78 3.35
4849 18539 7.712639 GGTGTGTAATTCATATGACATCTCTGT 59.287 37.037 4.48 0.00 38.67 3.41
4862 18552 4.401022 ACATCTCTGTCAAATTCAAGCCA 58.599 39.130 0.00 0.00 0.00 4.75
4863 18553 4.828939 ACATCTCTGTCAAATTCAAGCCAA 59.171 37.500 0.00 0.00 0.00 4.52
4864 18554 5.048224 ACATCTCTGTCAAATTCAAGCCAAG 60.048 40.000 0.00 0.00 0.00 3.61
4865 18555 4.464008 TCTCTGTCAAATTCAAGCCAAGT 58.536 39.130 0.00 0.00 0.00 3.16
4866 18556 4.516698 TCTCTGTCAAATTCAAGCCAAGTC 59.483 41.667 0.00 0.00 0.00 3.01
4867 18557 4.206375 TCTGTCAAATTCAAGCCAAGTCA 58.794 39.130 0.00 0.00 0.00 3.41
4868 18558 4.644234 TCTGTCAAATTCAAGCCAAGTCAA 59.356 37.500 0.00 0.00 0.00 3.18
4869 18559 5.302568 TCTGTCAAATTCAAGCCAAGTCAAT 59.697 36.000 0.00 0.00 0.00 2.57
4870 18560 5.916318 TGTCAAATTCAAGCCAAGTCAATT 58.084 33.333 0.00 0.00 0.00 2.32
4871 18561 7.014134 TCTGTCAAATTCAAGCCAAGTCAATTA 59.986 33.333 0.00 0.00 0.00 1.40
4872 18562 7.495901 TGTCAAATTCAAGCCAAGTCAATTAA 58.504 30.769 0.00 0.00 0.00 1.40
4873 18563 8.149647 TGTCAAATTCAAGCCAAGTCAATTAAT 58.850 29.630 0.00 0.00 0.00 1.40
4874 18564 8.992073 GTCAAATTCAAGCCAAGTCAATTAATT 58.008 29.630 0.00 0.00 0.00 1.40
4875 18565 8.991026 TCAAATTCAAGCCAAGTCAATTAATTG 58.009 29.630 20.13 20.13 39.10 2.32
4876 18566 6.973229 ATTCAAGCCAAGTCAATTAATTGC 57.027 33.333 21.15 16.11 37.68 3.56
4877 18567 5.726980 TCAAGCCAAGTCAATTAATTGCT 57.273 34.783 21.15 17.79 37.68 3.91
4878 18568 6.100404 TCAAGCCAAGTCAATTAATTGCTT 57.900 33.333 21.15 21.53 37.68 3.91
4879 18569 7.225784 TCAAGCCAAGTCAATTAATTGCTTA 57.774 32.000 24.55 13.55 37.68 3.09
4880 18570 7.839907 TCAAGCCAAGTCAATTAATTGCTTAT 58.160 30.769 24.55 16.39 37.68 1.73
4881 18571 8.965819 TCAAGCCAAGTCAATTAATTGCTTATA 58.034 29.630 24.55 13.54 37.68 0.98
4882 18572 9.585099 CAAGCCAAGTCAATTAATTGCTTATAA 57.415 29.630 24.55 8.52 37.68 0.98
4883 18573 9.586435 AAGCCAAGTCAATTAATTGCTTATAAC 57.414 29.630 24.55 16.88 37.68 1.89
4884 18574 8.971073 AGCCAAGTCAATTAATTGCTTATAACT 58.029 29.630 24.55 18.29 37.68 2.24
4900 18590 9.086758 TGCTTATAACTATCTCTAGGTTTACCC 57.913 37.037 0.00 0.00 36.42 3.69
4901 18591 8.242739 GCTTATAACTATCTCTAGGTTTACCCG 58.757 40.741 0.00 0.00 38.74 5.28
4902 18592 4.933505 AACTATCTCTAGGTTTACCCGC 57.066 45.455 0.00 0.00 38.74 6.13
4903 18593 3.907221 ACTATCTCTAGGTTTACCCGCA 58.093 45.455 0.00 0.00 38.74 5.69
4904 18594 4.284178 ACTATCTCTAGGTTTACCCGCAA 58.716 43.478 0.00 0.00 38.74 4.85
4905 18595 4.713321 ACTATCTCTAGGTTTACCCGCAAA 59.287 41.667 0.00 0.00 38.74 3.68
4906 18596 4.563140 ATCTCTAGGTTTACCCGCAAAA 57.437 40.909 0.00 0.00 38.74 2.44
4907 18597 3.667360 TCTCTAGGTTTACCCGCAAAAC 58.333 45.455 0.00 0.00 38.74 2.43
4908 18598 3.325716 TCTCTAGGTTTACCCGCAAAACT 59.674 43.478 0.00 2.92 38.88 2.66
4909 18599 4.070009 CTCTAGGTTTACCCGCAAAACTT 58.930 43.478 0.00 0.00 36.79 2.66
4910 18600 3.816523 TCTAGGTTTACCCGCAAAACTTG 59.183 43.478 0.00 0.00 36.79 3.16
4911 18601 2.380941 AGGTTTACCCGCAAAACTTGT 58.619 42.857 0.00 0.00 31.28 3.16
4912 18602 2.761767 AGGTTTACCCGCAAAACTTGTT 59.238 40.909 0.00 0.00 31.28 2.83
4913 18603 3.196039 AGGTTTACCCGCAAAACTTGTTT 59.804 39.130 0.00 0.00 31.28 2.83
5002 18692 3.888583 TCTTGGTTACTTTTCACCCGTT 58.111 40.909 0.00 0.00 31.24 4.44
5052 18742 4.181010 ATGCCATCGCCGCCTCTT 62.181 61.111 0.00 0.00 0.00 2.85
5098 18788 2.331893 CCGGCACCGAAAGCATCAA 61.332 57.895 11.42 0.00 42.83 2.57
5131 18842 2.558359 CCAACTCCTGATGGGAAAACAC 59.442 50.000 0.00 0.00 44.58 3.32
5151 18863 2.027897 TCGACACCGAAACACCCG 59.972 61.111 0.00 0.00 42.51 5.28
5166 18934 1.606313 CCCGGCCTTTGGTGATGTT 60.606 57.895 0.00 0.00 0.00 2.71
5187 18955 1.131126 GTCCATGTCATTGCGGTTCAG 59.869 52.381 0.00 0.00 0.00 3.02
5198 18966 1.276138 TGCGGTTCAGTGTCATGATCT 59.724 47.619 0.00 0.00 0.00 2.75
5211 18979 3.099905 TCATGATCTTGTTCTCCTCGGT 58.900 45.455 8.33 0.00 0.00 4.69
5301 19069 0.967380 CCCTCGCCCTTGAGCAATTT 60.967 55.000 0.00 0.00 34.56 1.82
5313 19081 5.335504 CCTTGAGCAATTTCCACTTCTCTTC 60.336 44.000 0.00 0.00 0.00 2.87
5346 19114 2.233922 CCTTCTTCTCGGCCAACTCTTA 59.766 50.000 2.24 0.00 0.00 2.10
5355 19123 2.239400 GGCCAACTCTTACTTTGCCTT 58.761 47.619 0.00 0.00 0.00 4.35
5362 19130 6.206634 CCAACTCTTACTTTGCCTTCAATGTA 59.793 38.462 0.00 0.00 39.99 2.29
5384 19152 4.582701 TTCGCCAACATCAACTCATTTT 57.417 36.364 0.00 0.00 0.00 1.82
5407 19175 3.301794 TGCACCATGGCATCTATCTTT 57.698 42.857 13.04 0.00 39.25 2.52
5408 19176 2.953648 TGCACCATGGCATCTATCTTTG 59.046 45.455 13.04 0.00 39.25 2.77
5409 19177 2.954318 GCACCATGGCATCTATCTTTGT 59.046 45.455 13.04 0.00 0.00 2.83
5410 19178 3.004106 GCACCATGGCATCTATCTTTGTC 59.996 47.826 13.04 0.00 0.00 3.18
5411 19179 3.249320 CACCATGGCATCTATCTTTGTCG 59.751 47.826 13.04 0.00 0.00 4.35
5412 19180 2.810274 CCATGGCATCTATCTTTGTCGG 59.190 50.000 0.00 0.00 0.00 4.79
5413 19181 3.470709 CATGGCATCTATCTTTGTCGGT 58.529 45.455 0.00 0.00 0.00 4.69
5414 19182 2.905075 TGGCATCTATCTTTGTCGGTG 58.095 47.619 0.00 0.00 0.00 4.94
5415 19183 1.599542 GGCATCTATCTTTGTCGGTGC 59.400 52.381 0.00 0.00 0.00 5.01
5416 19184 1.258982 GCATCTATCTTTGTCGGTGCG 59.741 52.381 0.00 0.00 0.00 5.34
5417 19185 2.809446 CATCTATCTTTGTCGGTGCGA 58.191 47.619 0.00 0.00 0.00 5.10
5425 19193 2.769617 GTCGGTGCGACGAACATG 59.230 61.111 8.54 0.00 46.56 3.21
5426 19194 2.019951 GTCGGTGCGACGAACATGT 61.020 57.895 8.54 0.00 46.56 3.21
5427 19195 2.019408 TCGGTGCGACGAACATGTG 61.019 57.895 8.54 0.00 40.34 3.21
5428 19196 2.307309 CGGTGCGACGAACATGTGT 61.307 57.895 8.54 0.00 35.47 3.72
5429 19197 1.204062 GGTGCGACGAACATGTGTG 59.796 57.895 8.54 0.00 0.00 3.82
5430 19198 1.495584 GGTGCGACGAACATGTGTGT 61.496 55.000 8.54 0.00 41.28 3.72
5438 19206 2.029743 AACATGTGTGTTCGCCACC 58.970 52.632 0.00 0.00 45.14 4.61
5439 19207 1.452145 AACATGTGTGTTCGCCACCC 61.452 55.000 0.00 0.00 45.14 4.61
5440 19208 1.600636 CATGTGTGTTCGCCACCCT 60.601 57.895 3.12 0.00 43.85 4.34
5441 19209 1.600636 ATGTGTGTTCGCCACCCTG 60.601 57.895 3.12 0.00 43.85 4.45
5442 19210 2.050836 ATGTGTGTTCGCCACCCTGA 62.051 55.000 3.12 0.00 43.85 3.86
5443 19211 2.110213 TGTGTTCGCCACCCTGAC 59.890 61.111 3.12 0.00 43.85 3.51
5444 19212 2.426023 GTGTTCGCCACCCTGACT 59.574 61.111 0.00 0.00 38.18 3.41
5445 19213 1.227853 GTGTTCGCCACCCTGACTT 60.228 57.895 0.00 0.00 38.18 3.01
5446 19214 0.034337 GTGTTCGCCACCCTGACTTA 59.966 55.000 0.00 0.00 38.18 2.24
5447 19215 0.981183 TGTTCGCCACCCTGACTTAT 59.019 50.000 0.00 0.00 0.00 1.73
5448 19216 1.338674 TGTTCGCCACCCTGACTTATG 60.339 52.381 0.00 0.00 0.00 1.90
5449 19217 0.392461 TTCGCCACCCTGACTTATGC 60.392 55.000 0.00 0.00 0.00 3.14
5450 19218 1.078497 CGCCACCCTGACTTATGCA 60.078 57.895 0.00 0.00 0.00 3.96
5451 19219 1.369091 CGCCACCCTGACTTATGCAC 61.369 60.000 0.00 0.00 0.00 4.57
5452 19220 1.032114 GCCACCCTGACTTATGCACC 61.032 60.000 0.00 0.00 0.00 5.01
5453 19221 0.744414 CCACCCTGACTTATGCACCG 60.744 60.000 0.00 0.00 0.00 4.94
5454 19222 0.744414 CACCCTGACTTATGCACCGG 60.744 60.000 0.00 0.00 0.00 5.28
5455 19223 1.819632 CCCTGACTTATGCACCGGC 60.820 63.158 0.00 0.00 41.68 6.13
5456 19224 2.173669 CCTGACTTATGCACCGGCG 61.174 63.158 0.00 0.00 45.35 6.46
5457 19225 1.447838 CTGACTTATGCACCGGCGT 60.448 57.895 6.01 0.00 45.35 5.68
5458 19226 0.179121 CTGACTTATGCACCGGCGTA 60.179 55.000 6.01 0.00 45.35 4.42
5459 19227 0.458889 TGACTTATGCACCGGCGTAC 60.459 55.000 6.01 0.00 45.35 3.67
5460 19228 1.477030 GACTTATGCACCGGCGTACG 61.477 60.000 11.84 11.84 45.35 3.67
5483 19251 7.730067 CGACAAGTCGTACATTTAGTATCAA 57.270 36.000 14.03 0.00 46.99 2.57
5484 19252 7.818805 CGACAAGTCGTACATTTAGTATCAAG 58.181 38.462 14.03 0.00 46.99 3.02
5485 19253 7.044249 CGACAAGTCGTACATTTAGTATCAAGG 60.044 40.741 14.03 0.00 46.99 3.61
5486 19254 6.534079 ACAAGTCGTACATTTAGTATCAAGGC 59.466 38.462 0.00 0.00 34.67 4.35
5487 19255 6.466885 AGTCGTACATTTAGTATCAAGGCT 57.533 37.500 0.00 0.00 34.67 4.58
5488 19256 6.875076 AGTCGTACATTTAGTATCAAGGCTT 58.125 36.000 0.00 0.00 34.67 4.35
5489 19257 6.757010 AGTCGTACATTTAGTATCAAGGCTTG 59.243 38.462 21.17 21.17 34.67 4.01
5490 19258 5.522460 TCGTACATTTAGTATCAAGGCTTGC 59.478 40.000 22.31 8.73 34.67 4.01
5491 19259 5.523916 CGTACATTTAGTATCAAGGCTTGCT 59.476 40.000 22.31 15.52 34.67 3.91
5492 19260 5.824904 ACATTTAGTATCAAGGCTTGCTG 57.175 39.130 22.31 10.64 0.00 4.41
5493 19261 5.256474 ACATTTAGTATCAAGGCTTGCTGT 58.744 37.500 22.31 12.65 0.00 4.40
5494 19262 6.414732 ACATTTAGTATCAAGGCTTGCTGTA 58.585 36.000 22.31 11.70 0.00 2.74
5495 19263 6.884295 ACATTTAGTATCAAGGCTTGCTGTAA 59.116 34.615 22.31 13.13 0.00 2.41
5496 19264 6.985188 TTTAGTATCAAGGCTTGCTGTAAG 57.015 37.500 22.31 0.75 39.49 2.34
5497 19265 4.826274 AGTATCAAGGCTTGCTGTAAGA 57.174 40.909 22.31 3.60 38.76 2.10
5498 19266 5.365021 AGTATCAAGGCTTGCTGTAAGAT 57.635 39.130 22.31 10.97 38.76 2.40
5499 19267 5.121811 AGTATCAAGGCTTGCTGTAAGATG 58.878 41.667 22.31 5.12 38.76 2.90
5500 19268 3.701205 TCAAGGCTTGCTGTAAGATGA 57.299 42.857 22.31 7.21 38.76 2.92
5501 19269 3.603532 TCAAGGCTTGCTGTAAGATGAG 58.396 45.455 22.31 0.00 38.76 2.90
5502 19270 2.035530 AGGCTTGCTGTAAGATGAGC 57.964 50.000 9.78 0.00 38.76 4.26
5503 19271 1.280133 AGGCTTGCTGTAAGATGAGCA 59.720 47.619 9.78 0.00 43.47 4.26
5509 19277 4.541973 TGCTGTAAGATGAGCAAGAGAA 57.458 40.909 0.00 0.00 42.22 2.87
5510 19278 4.502016 TGCTGTAAGATGAGCAAGAGAAG 58.498 43.478 0.00 0.00 42.22 2.85
5511 19279 3.309410 GCTGTAAGATGAGCAAGAGAAGC 59.691 47.826 0.00 0.00 34.07 3.86
5512 19280 3.866651 TGTAAGATGAGCAAGAGAAGCC 58.133 45.455 0.00 0.00 0.00 4.35
5513 19281 2.021355 AAGATGAGCAAGAGAAGCCG 57.979 50.000 0.00 0.00 0.00 5.52
5514 19282 0.461693 AGATGAGCAAGAGAAGCCGC 60.462 55.000 0.00 0.00 0.00 6.53
5515 19283 0.461693 GATGAGCAAGAGAAGCCGCT 60.462 55.000 0.00 0.00 37.44 5.52
5516 19284 3.792904 GAGCAAGAGAAGCCGCTC 58.207 61.111 0.00 0.00 43.60 5.03
5517 19285 1.217779 GAGCAAGAGAAGCCGCTCT 59.782 57.895 0.00 0.34 46.81 4.09
5524 19292 3.773974 GAAGCCGCTCTTCGTGAG 58.226 61.111 0.00 4.32 41.48 3.51
5525 19293 1.213013 GAAGCCGCTCTTCGTGAGA 59.787 57.895 11.23 2.44 45.39 3.27
5526 19294 0.179124 GAAGCCGCTCTTCGTGAGAT 60.179 55.000 11.23 0.00 45.39 2.75
5527 19295 0.179124 AAGCCGCTCTTCGTGAGATC 60.179 55.000 11.23 0.00 45.39 2.75
5528 19296 1.139734 GCCGCTCTTCGTGAGATCA 59.860 57.895 11.23 0.00 45.39 2.92
5529 19297 0.458543 GCCGCTCTTCGTGAGATCAA 60.459 55.000 11.23 0.00 45.39 2.57
5530 19298 1.554392 CCGCTCTTCGTGAGATCAAG 58.446 55.000 11.23 0.00 45.39 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.039074 CACACGTCACTGGAGGAGTC 60.039 60.000 0.00 0.00 31.78 3.36
5 6 1.373497 GCACACGTCACTGGAGGAG 60.373 63.158 0.00 0.00 33.25 3.69
6 7 1.399744 AAGCACACGTCACTGGAGGA 61.400 55.000 0.00 0.00 33.25 3.71
7 8 1.069765 AAGCACACGTCACTGGAGG 59.930 57.895 0.00 0.00 35.10 4.30
8 9 1.835483 GCAAGCACACGTCACTGGAG 61.835 60.000 0.00 0.00 0.00 3.86
9 10 1.887242 GCAAGCACACGTCACTGGA 60.887 57.895 0.00 0.00 0.00 3.86
10 11 1.509644 ATGCAAGCACACGTCACTGG 61.510 55.000 0.00 0.00 0.00 4.00
11 12 1.136252 GTATGCAAGCACACGTCACTG 60.136 52.381 0.00 0.00 0.00 3.66
12 13 1.148310 GTATGCAAGCACACGTCACT 58.852 50.000 0.00 0.00 0.00 3.41
13 14 1.136252 CAGTATGCAAGCACACGTCAC 60.136 52.381 0.00 0.00 0.00 3.67
14 15 1.147473 CAGTATGCAAGCACACGTCA 58.853 50.000 0.00 0.00 0.00 4.35
15 16 3.955429 CAGTATGCAAGCACACGTC 57.045 52.632 0.00 0.00 0.00 4.34
27 28 2.676839 CTCCAAAGCTGAGTGCAGTATG 59.323 50.000 0.00 0.00 45.94 2.39
28 29 2.355513 CCTCCAAAGCTGAGTGCAGTAT 60.356 50.000 0.00 0.00 45.94 2.12
29 30 1.002430 CCTCCAAAGCTGAGTGCAGTA 59.998 52.381 0.00 0.00 45.94 2.74
30 31 0.250640 CCTCCAAAGCTGAGTGCAGT 60.251 55.000 0.00 0.00 45.94 4.40
31 32 0.250640 ACCTCCAAAGCTGAGTGCAG 60.251 55.000 0.00 0.00 45.94 4.41
32 33 1.055849 TACCTCCAAAGCTGAGTGCA 58.944 50.000 0.00 0.00 45.94 4.57
33 34 1.270839 TGTACCTCCAAAGCTGAGTGC 60.271 52.381 0.00 0.00 43.29 4.40
34 35 2.224281 TGTGTACCTCCAAAGCTGAGTG 60.224 50.000 0.00 0.00 0.00 3.51
38 39 2.224281 TGTCTGTGTACCTCCAAAGCTG 60.224 50.000 0.00 0.00 0.00 4.24
41 42 2.223971 ACGTGTCTGTGTACCTCCAAAG 60.224 50.000 0.00 0.00 0.00 2.77
42 43 1.758280 ACGTGTCTGTGTACCTCCAAA 59.242 47.619 0.00 0.00 0.00 3.28
57 58 4.267357 GTGTTCACACATAAACACGTGT 57.733 40.909 17.22 17.22 43.92 4.49
85 86 1.553706 TCGTCTCCAACTAGTTCCCC 58.446 55.000 4.77 0.00 0.00 4.81
88 90 2.987821 GCACTTCGTCTCCAACTAGTTC 59.012 50.000 4.77 0.00 0.00 3.01
89 91 2.628657 AGCACTTCGTCTCCAACTAGTT 59.371 45.455 1.12 1.12 0.00 2.24
93 95 3.589988 CATTAGCACTTCGTCTCCAACT 58.410 45.455 0.00 0.00 0.00 3.16
113 117 2.631267 CACAACGATCATGATGGACCA 58.369 47.619 22.78 0.00 0.00 4.02
119 123 0.466189 GGGGCCACAACGATCATGAT 60.466 55.000 8.25 8.25 0.00 2.45
131 135 1.064463 TGATGATCTCTTTGGGGCCAC 60.064 52.381 4.39 0.00 0.00 5.01
133 137 1.685148 GTGATGATCTCTTTGGGGCC 58.315 55.000 0.00 0.00 0.00 5.80
136 140 3.054139 TCCTTGGTGATGATCTCTTTGGG 60.054 47.826 0.00 0.00 0.00 4.12
139 143 5.126707 GCAAATCCTTGGTGATGATCTCTTT 59.873 40.000 0.00 0.00 32.76 2.52
148 152 5.337491 GGTGTATTTGCAAATCCTTGGTGAT 60.337 40.000 27.28 3.91 32.76 3.06
168 172 5.979993 TGTGTATTCATATTACCACGGTGT 58.020 37.500 7.45 0.00 0.00 4.16
226 238 8.565896 TCATTAACAGATCTAGCAACATTGTT 57.434 30.769 0.00 0.00 0.00 2.83
227 239 7.281774 CCTCATTAACAGATCTAGCAACATTGT 59.718 37.037 0.00 0.00 0.00 2.71
228 240 7.496920 TCCTCATTAACAGATCTAGCAACATTG 59.503 37.037 0.00 0.00 0.00 2.82
229 241 7.568349 TCCTCATTAACAGATCTAGCAACATT 58.432 34.615 0.00 0.00 0.00 2.71
230 242 7.129457 TCCTCATTAACAGATCTAGCAACAT 57.871 36.000 0.00 0.00 0.00 2.71
284 296 6.096673 TCTTGCACACAGTTAGATGTAGAA 57.903 37.500 0.00 0.00 0.00 2.10
288 301 4.310769 GACTCTTGCACACAGTTAGATGT 58.689 43.478 0.00 0.00 0.00 3.06
298 311 2.532186 TGCATCGACTCTTGCACAC 58.468 52.632 7.31 0.00 43.54 3.82
328 341 7.425595 GCTGACATTATACGAAGTTAAAGCAAC 59.574 37.037 0.00 0.00 37.78 4.17
335 348 7.465379 GCATGTTGCTGACATTATACGAAGTTA 60.465 37.037 3.91 0.00 46.80 2.24
342 355 4.201940 TGCTGCATGTTGCTGACATTATAC 60.202 41.667 0.00 0.00 46.80 1.47
349 362 3.030209 CATGCTGCATGTTGCTGAC 57.970 52.632 29.59 3.15 45.31 3.51
367 380 7.756272 TGTCAATGCATGAGAATTCAAATACAC 59.244 33.333 8.44 0.00 39.19 2.90
373 386 5.165676 GCTTGTCAATGCATGAGAATTCAA 58.834 37.500 8.44 2.33 40.21 2.69
374 387 4.381185 GGCTTGTCAATGCATGAGAATTCA 60.381 41.667 8.44 0.00 40.21 2.57
375 388 4.110482 GGCTTGTCAATGCATGAGAATTC 58.890 43.478 0.00 0.00 40.21 2.17
378 391 1.820519 GGGCTTGTCAATGCATGAGAA 59.179 47.619 0.00 4.38 39.19 2.87
389 402 4.523943 GCATATGGAATTATGGGCTTGTCA 59.476 41.667 4.56 0.00 31.50 3.58
395 408 4.888326 TTTGGCATATGGAATTATGGGC 57.112 40.909 4.56 0.00 31.50 5.36
403 416 4.216042 CGTGCTATCATTTGGCATATGGAA 59.784 41.667 16.29 5.75 38.27 3.53
448 461 4.384868 CGAGGTCCTAACATGGGGTATTTT 60.385 45.833 0.00 0.00 0.00 1.82
452 465 1.288633 TCGAGGTCCTAACATGGGGTA 59.711 52.381 0.00 0.00 0.00 3.69
491 506 6.642683 ACTTGTCGACGATTAAATGGTTAG 57.357 37.500 11.62 0.00 0.00 2.34
505 520 8.014322 TCTTGTATTGTGAATTACTTGTCGAC 57.986 34.615 9.11 9.11 0.00 4.20
538 553 6.306987 GTCAATTACCCTATCCATCCACATT 58.693 40.000 0.00 0.00 0.00 2.71
561 576 6.534475 TGACCGAATAACAAGTAGTATGGT 57.466 37.500 0.00 0.00 0.00 3.55
604 622 7.914871 TGAAATTTGATAACATAAGACATGGCG 59.085 33.333 0.00 0.00 0.00 5.69
607 625 8.950961 CGCTGAAATTTGATAACATAAGACATG 58.049 33.333 0.00 0.00 0.00 3.21
609 627 8.039603 ACGCTGAAATTTGATAACATAAGACA 57.960 30.769 0.00 0.00 0.00 3.41
614 632 7.909641 CACATGACGCTGAAATTTGATAACATA 59.090 33.333 0.00 0.00 0.00 2.29
622 640 2.663808 TGCACATGACGCTGAAATTTG 58.336 42.857 0.00 0.00 0.00 2.32
625 643 3.247442 CAATTGCACATGACGCTGAAAT 58.753 40.909 0.00 0.00 0.00 2.17
630 649 0.109458 CAGCAATTGCACATGACGCT 60.109 50.000 30.89 5.18 45.16 5.07
634 653 5.838531 TGAATATCAGCAATTGCACATGA 57.161 34.783 30.89 24.68 45.16 3.07
638 657 8.806177 TGAATTATGAATATCAGCAATTGCAC 57.194 30.769 30.89 13.27 45.16 4.57
679 702 3.577649 ATTCGGCTATGATCGATCGTT 57.422 42.857 24.39 14.62 35.25 3.85
715 738 2.105128 CCGACATCGTGGCCTCTC 59.895 66.667 3.32 0.00 37.74 3.20
730 753 2.414029 CGATTCACCCAACAATTCACCG 60.414 50.000 0.00 0.00 0.00 4.94
810 2275 2.476199 CTGTTCTGGAGAGGGGATTCT 58.524 52.381 0.00 0.00 0.00 2.40
811 2276 1.134250 GCTGTTCTGGAGAGGGGATTC 60.134 57.143 0.00 0.00 0.00 2.52
814 2279 0.616111 GAGCTGTTCTGGAGAGGGGA 60.616 60.000 0.00 0.00 0.00 4.81
817 2299 0.536260 CCTGAGCTGTTCTGGAGAGG 59.464 60.000 11.17 0.00 45.23 3.69
1204 2705 1.593070 CCAGAAATCAAGAATCGCGCG 60.593 52.381 26.76 26.76 0.00 6.86
1253 2754 3.620821 GGAGAGCAAGCAATCTGAACTAC 59.379 47.826 0.00 0.00 0.00 2.73
1277 2778 3.096852 CCACCAAGGGTCTAAAATTCCC 58.903 50.000 0.00 0.00 41.36 3.97
1294 2795 1.770294 AGACCTCGAGATCTTCCACC 58.230 55.000 15.71 0.00 0.00 4.61
1344 2845 5.659440 TGATGAGGGTTTGCCTTAAAATC 57.341 39.130 0.00 0.00 34.45 2.17
1384 2941 6.598064 TCATCTCCATGCTCATATTATGCAAG 59.402 38.462 0.00 0.00 40.24 4.01
1385 2942 6.478129 TCATCTCCATGCTCATATTATGCAA 58.522 36.000 0.00 0.00 40.24 4.08
1387 2944 7.499563 AGAATCATCTCCATGCTCATATTATGC 59.500 37.037 0.00 0.00 0.00 3.14
1388 2945 8.831550 CAGAATCATCTCCATGCTCATATTATG 58.168 37.037 0.00 0.00 32.03 1.90
1389 2946 7.499563 GCAGAATCATCTCCATGCTCATATTAT 59.500 37.037 0.00 0.00 32.03 1.28
1390 2947 6.822170 GCAGAATCATCTCCATGCTCATATTA 59.178 38.462 0.00 0.00 32.03 0.98
1391 2948 5.648526 GCAGAATCATCTCCATGCTCATATT 59.351 40.000 0.00 0.00 32.03 1.28
1406 2963 7.393216 AGAAAAGACTCTGTAAGCAGAATCAT 58.607 34.615 8.44 0.00 46.86 2.45
1456 3053 2.549754 TGCAGCAAACTCAGCTTCTTAC 59.450 45.455 0.00 0.00 41.14 2.34
1495 3092 4.517952 TTTCAGCACACCAAACATATGG 57.482 40.909 7.80 0.00 46.38 2.74
1534 3131 4.505922 CGGCAGCAAGTGAAATTTGTAAAA 59.494 37.500 0.00 0.00 35.77 1.52
1556 3153 6.727824 AGAGAACCACAAGAATTTCATACG 57.272 37.500 0.00 0.00 0.00 3.06
1608 3205 6.874288 GCAGGATTAAGATAAGACTGCATT 57.126 37.500 16.99 0.00 46.51 3.56
1696 3319 9.753674 AAATCTCTGACCACATTTTTAGGAATA 57.246 29.630 0.00 0.00 0.00 1.75
1697 3320 8.655935 AAATCTCTGACCACATTTTTAGGAAT 57.344 30.769 0.00 0.00 0.00 3.01
1714 3337 4.142513 GGCCTCTTAGCAACAAAATCTCTG 60.143 45.833 0.00 0.00 0.00 3.35
1742 3365 8.531982 TGGACTGCGAGCTAAAATAGATATAAT 58.468 33.333 0.00 0.00 0.00 1.28
1791 3416 1.587946 GCCAACAAAAACGAGCAACAG 59.412 47.619 0.00 0.00 0.00 3.16
1794 3419 2.100584 AGATGCCAACAAAAACGAGCAA 59.899 40.909 0.00 0.00 33.35 3.91
1895 3560 0.611200 TAAGCGCTTTGGCAGGAGTA 59.389 50.000 30.13 2.35 38.60 2.59
1931 3596 6.575162 AGGTCAACAAATGAAACAGATACC 57.425 37.500 0.00 0.00 40.50 2.73
1947 3612 8.617809 TCTGTTGTAGACAAAATAAAGGTCAAC 58.382 33.333 0.00 0.00 37.93 3.18
2041 3706 0.618458 TATCAACACCTGGTGGGAGC 59.382 55.000 29.05 0.00 37.94 4.70
2147 3895 6.327934 CAATGACATGGGTTCTCAAGATTTC 58.672 40.000 0.00 0.00 0.00 2.17
2291 4041 3.957497 AGAAGTGCTAGAGGACACATAGG 59.043 47.826 3.91 0.00 39.30 2.57
2297 4047 5.047943 GTCTAAACAGAAGTGCTAGAGGACA 60.048 44.000 3.91 0.00 38.96 4.02
2334 4084 7.481275 ACACCTTGCAAATTAAACAAATCAG 57.519 32.000 0.00 0.00 0.00 2.90
2408 4215 7.856145 AAATCTCTAACAGTATTTCCAGCAG 57.144 36.000 0.00 0.00 0.00 4.24
2528 4335 4.588528 AGCAAGGATTACAAAATGTGTGGT 59.411 37.500 0.00 0.00 41.89 4.16
2552 4360 6.011481 TGATGGATGGCTGATTGCAATTATA 58.989 36.000 14.33 2.74 45.15 0.98
2553 4361 4.836175 TGATGGATGGCTGATTGCAATTAT 59.164 37.500 14.33 3.85 45.15 1.28
2578 4386 9.865321 ATAAACTTAGTTTCTACTATTCGCACA 57.135 29.630 14.03 0.00 36.76 4.57
2613 4421 8.691661 ACAATCAAAAATGTACCTGTAAGAGT 57.308 30.769 0.00 0.00 34.07 3.24
2698 4572 5.393866 ACAGGGAAAACCACATGTAGAAAT 58.606 37.500 0.00 0.00 43.89 2.17
2704 4578 5.741673 GCAATTAACAGGGAAAACCACATGT 60.742 40.000 0.00 0.00 43.89 3.21
2705 4579 4.690280 GCAATTAACAGGGAAAACCACATG 59.310 41.667 0.00 0.00 43.89 3.21
2724 4600 1.577328 CGGCGAACAACTGGAGCAAT 61.577 55.000 0.00 0.00 0.00 3.56
2883 4759 2.779506 AGAAAGAGTTGCCGGTTAAGG 58.220 47.619 1.90 0.00 0.00 2.69
2884 4760 3.188667 GGAAGAAAGAGTTGCCGGTTAAG 59.811 47.826 1.90 0.00 0.00 1.85
2888 4764 0.472471 TGGAAGAAAGAGTTGCCGGT 59.528 50.000 1.90 0.00 0.00 5.28
2889 4765 1.604604 TTGGAAGAAAGAGTTGCCGG 58.395 50.000 0.00 0.00 0.00 6.13
2921 12814 9.346725 CAGCCTGAAAAAGAGAAATTATTACAC 57.653 33.333 0.00 0.00 0.00 2.90
2929 12822 3.504375 AGGCAGCCTGAAAAAGAGAAAT 58.496 40.909 15.24 0.00 29.57 2.17
2938 12831 2.519771 ATGATGAAGGCAGCCTGAAA 57.480 45.000 17.05 3.78 32.13 2.69
3066 12959 5.181245 CCACAAATGGTAGAAACTAGGTGTG 59.819 44.000 0.00 0.00 41.64 3.82
3068 12961 5.880054 CCACAAATGGTAGAAACTAGGTG 57.120 43.478 0.00 0.00 41.64 4.00
3360 13349 9.881649 AATGCCCAAACAAAAATAAAACAAAAT 57.118 22.222 0.00 0.00 0.00 1.82
3507 13500 6.609907 TGCGACACAAATTCATTTTTATCG 57.390 33.333 0.00 0.00 32.31 2.92
3528 13521 5.298777 AGAGCAGATGGTGATTTCTTAATGC 59.701 40.000 0.00 0.00 0.00 3.56
3564 13559 4.827284 CCTGCCTAACCAGGTATTAATTGG 59.173 45.833 0.00 3.52 45.87 3.16
3693 13688 1.175983 CCCTCCTTCCGGATCTCGAG 61.176 65.000 4.15 5.93 42.43 4.04
3765 13760 6.267471 ACAACAAGCAAAATCCTTCCTCAATA 59.733 34.615 0.00 0.00 0.00 1.90
3898 13894 2.369532 AGCTGCACCAATTTTCCAATGT 59.630 40.909 1.02 0.00 0.00 2.71
3962 13958 8.596380 CAAAGCAGACAGTAAAATAGTACTAGC 58.404 37.037 8.85 1.86 32.92 3.42
3963 13959 8.596380 GCAAAGCAGACAGTAAAATAGTACTAG 58.404 37.037 8.85 0.00 32.92 2.57
3966 13962 6.090358 TCGCAAAGCAGACAGTAAAATAGTAC 59.910 38.462 0.00 0.00 0.00 2.73
4325 14438 1.555075 TGCCTGGACTGGTATCTGAAC 59.445 52.381 0.00 0.00 0.00 3.18
4379 14492 0.321919 GGCCACATCTGTCTCTTGCA 60.322 55.000 0.00 0.00 0.00 4.08
4389 14502 3.965888 GGTCTTCTTGGCCACATCT 57.034 52.632 3.88 0.00 40.97 2.90
4455 18135 3.637273 GCCACCCAGAGGAACGGT 61.637 66.667 0.00 0.00 36.73 4.83
4484 18164 0.831307 GAGGTAGCATTCGGGGTTCT 59.169 55.000 0.00 0.00 0.00 3.01
4499 18179 3.362706 ACGTATACACAGACATGGAGGT 58.637 45.455 3.32 0.00 0.00 3.85
4519 18199 2.825532 ACTGTTACATTCATGCCCCAAC 59.174 45.455 0.00 0.00 0.00 3.77
4524 18204 3.501828 TGTGTCACTGTTACATTCATGCC 59.498 43.478 4.27 0.00 0.00 4.40
4538 18218 3.630769 TCGTCTACTGTTCTTGTGTCACT 59.369 43.478 4.27 0.00 0.00 3.41
4545 18225 6.444633 TCTAACCTTTCGTCTACTGTTCTTG 58.555 40.000 0.00 0.00 0.00 3.02
4581 18261 2.671682 GTCTGGAAGGCACTCCCC 59.328 66.667 3.46 0.00 39.41 4.81
4582 18262 2.190488 CTGGTCTGGAAGGCACTCCC 62.190 65.000 3.46 0.00 43.51 4.30
4584 18264 1.194781 TCCTGGTCTGGAAGGCACTC 61.195 60.000 0.00 0.00 43.51 3.51
4586 18266 0.329596 ATTCCTGGTCTGGAAGGCAC 59.670 55.000 13.34 0.00 43.51 5.01
4587 18267 0.329261 CATTCCTGGTCTGGAAGGCA 59.671 55.000 13.34 0.00 43.51 4.75
4592 18272 3.415186 GGCCATTCCTGGTCTGGA 58.585 61.111 17.63 0.00 44.26 3.86
4621 18301 8.612619 CCATCTGTATATGTACAACCAAAGAAC 58.387 37.037 0.00 0.00 40.16 3.01
4623 18303 7.857456 ACCATCTGTATATGTACAACCAAAGA 58.143 34.615 0.00 1.47 40.16 2.52
4624 18304 9.607988 TTACCATCTGTATATGTACAACCAAAG 57.392 33.333 0.00 0.00 40.16 2.77
4636 18316 8.304596 ACGATCACGATTTTACCATCTGTATAT 58.695 33.333 0.00 0.00 42.66 0.86
4637 18317 7.654568 ACGATCACGATTTTACCATCTGTATA 58.345 34.615 0.00 0.00 42.66 1.47
4655 18335 0.638746 CGACACGCCTAAACGATCAC 59.361 55.000 0.00 0.00 36.70 3.06
4668 18348 2.786027 CTGCAGATCTTACATCGACACG 59.214 50.000 8.42 0.00 0.00 4.49
4694 18374 0.035036 TCGTATTCAAACCCGCACCA 59.965 50.000 0.00 0.00 0.00 4.17
4735 18425 6.128090 ACAGTACAGCATCATGAATTGTGAAG 60.128 38.462 16.06 9.90 0.00 3.02
4747 18437 1.055849 ACCACCACAGTACAGCATCA 58.944 50.000 0.00 0.00 0.00 3.07
4755 18445 4.821940 TCCATATCCATACCACCACAGTA 58.178 43.478 0.00 0.00 0.00 2.74
4756 18446 3.664320 TCCATATCCATACCACCACAGT 58.336 45.455 0.00 0.00 0.00 3.55
4757 18447 4.705110 TTCCATATCCATACCACCACAG 57.295 45.455 0.00 0.00 0.00 3.66
4759 18449 4.218417 GCAATTCCATATCCATACCACCAC 59.782 45.833 0.00 0.00 0.00 4.16
4772 18462 1.064758 ACTTCCTGCCGCAATTCCATA 60.065 47.619 0.00 0.00 0.00 2.74
4773 18463 0.323725 ACTTCCTGCCGCAATTCCAT 60.324 50.000 0.00 0.00 0.00 3.41
4774 18464 0.539438 AACTTCCTGCCGCAATTCCA 60.539 50.000 0.00 0.00 0.00 3.53
4775 18465 0.109132 CAACTTCCTGCCGCAATTCC 60.109 55.000 0.00 0.00 0.00 3.01
4776 18466 0.109132 CCAACTTCCTGCCGCAATTC 60.109 55.000 0.00 0.00 0.00 2.17
4777 18467 1.535204 CCCAACTTCCTGCCGCAATT 61.535 55.000 0.00 0.00 0.00 2.32
4778 18468 1.978617 CCCAACTTCCTGCCGCAAT 60.979 57.895 0.00 0.00 0.00 3.56
4779 18469 2.597217 CCCAACTTCCTGCCGCAA 60.597 61.111 0.00 0.00 0.00 4.85
4780 18470 3.126703 TTCCCAACTTCCTGCCGCA 62.127 57.895 0.00 0.00 0.00 5.69
4781 18471 2.282180 TTCCCAACTTCCTGCCGC 60.282 61.111 0.00 0.00 0.00 6.53
4782 18472 0.250727 TTCTTCCCAACTTCCTGCCG 60.251 55.000 0.00 0.00 0.00 5.69
4783 18473 1.073923 TCTTCTTCCCAACTTCCTGCC 59.926 52.381 0.00 0.00 0.00 4.85
4784 18474 2.224646 ACTCTTCTTCCCAACTTCCTGC 60.225 50.000 0.00 0.00 0.00 4.85
4785 18475 3.778954 ACTCTTCTTCCCAACTTCCTG 57.221 47.619 0.00 0.00 0.00 3.86
4786 18476 5.548056 TGAATACTCTTCTTCCCAACTTCCT 59.452 40.000 0.00 0.00 0.00 3.36
4787 18477 5.805728 TGAATACTCTTCTTCCCAACTTCC 58.194 41.667 0.00 0.00 0.00 3.46
4788 18478 6.370166 CACTGAATACTCTTCTTCCCAACTTC 59.630 42.308 0.00 0.00 0.00 3.01
4789 18479 6.234177 CACTGAATACTCTTCTTCCCAACTT 58.766 40.000 0.00 0.00 0.00 2.66
4790 18480 5.799213 CACTGAATACTCTTCTTCCCAACT 58.201 41.667 0.00 0.00 0.00 3.16
4791 18481 4.393371 GCACTGAATACTCTTCTTCCCAAC 59.607 45.833 0.00 0.00 0.00 3.77
4792 18482 4.041567 TGCACTGAATACTCTTCTTCCCAA 59.958 41.667 0.00 0.00 0.00 4.12
4793 18483 3.582647 TGCACTGAATACTCTTCTTCCCA 59.417 43.478 0.00 0.00 0.00 4.37
4794 18484 4.207891 TGCACTGAATACTCTTCTTCCC 57.792 45.455 0.00 0.00 0.00 3.97
4795 18485 4.574013 CCATGCACTGAATACTCTTCTTCC 59.426 45.833 0.00 0.00 0.00 3.46
4796 18486 5.181748 ACCATGCACTGAATACTCTTCTTC 58.818 41.667 0.00 0.00 0.00 2.87
4797 18487 5.171339 ACCATGCACTGAATACTCTTCTT 57.829 39.130 0.00 0.00 0.00 2.52
4798 18488 4.833478 ACCATGCACTGAATACTCTTCT 57.167 40.909 0.00 0.00 0.00 2.85
4799 18489 6.017605 CCATAACCATGCACTGAATACTCTTC 60.018 42.308 0.00 0.00 0.00 2.87
4800 18490 5.824624 CCATAACCATGCACTGAATACTCTT 59.175 40.000 0.00 0.00 0.00 2.85
4801 18491 5.104360 ACCATAACCATGCACTGAATACTCT 60.104 40.000 0.00 0.00 0.00 3.24
4802 18492 5.008019 CACCATAACCATGCACTGAATACTC 59.992 44.000 0.00 0.00 0.00 2.59
4803 18493 4.883585 CACCATAACCATGCACTGAATACT 59.116 41.667 0.00 0.00 0.00 2.12
4804 18494 4.640201 ACACCATAACCATGCACTGAATAC 59.360 41.667 0.00 0.00 0.00 1.89
4805 18495 4.639755 CACACCATAACCATGCACTGAATA 59.360 41.667 0.00 0.00 0.00 1.75
4806 18496 3.444742 CACACCATAACCATGCACTGAAT 59.555 43.478 0.00 0.00 0.00 2.57
4807 18497 2.819019 CACACCATAACCATGCACTGAA 59.181 45.455 0.00 0.00 0.00 3.02
4808 18498 2.224744 ACACACCATAACCATGCACTGA 60.225 45.455 0.00 0.00 0.00 3.41
4809 18499 2.161855 ACACACCATAACCATGCACTG 58.838 47.619 0.00 0.00 0.00 3.66
4810 18500 2.584835 ACACACCATAACCATGCACT 57.415 45.000 0.00 0.00 0.00 4.40
4811 18501 4.981806 ATTACACACCATAACCATGCAC 57.018 40.909 0.00 0.00 0.00 4.57
4812 18502 5.012893 TGAATTACACACCATAACCATGCA 58.987 37.500 0.00 0.00 0.00 3.96
4813 18503 5.574891 TGAATTACACACCATAACCATGC 57.425 39.130 0.00 0.00 0.00 4.06
4814 18504 9.065798 TCATATGAATTACACACCATAACCATG 57.934 33.333 1.98 0.00 0.00 3.66
4815 18505 9.066892 GTCATATGAATTACACACCATAACCAT 57.933 33.333 7.07 0.00 0.00 3.55
4816 18506 8.049721 TGTCATATGAATTACACACCATAACCA 58.950 33.333 7.07 0.00 0.00 3.67
4817 18507 8.445275 TGTCATATGAATTACACACCATAACC 57.555 34.615 7.07 0.00 0.00 2.85
4820 18510 9.710900 GAGATGTCATATGAATTACACACCATA 57.289 33.333 7.07 0.00 0.00 2.74
4821 18511 8.435187 AGAGATGTCATATGAATTACACACCAT 58.565 33.333 7.07 3.26 0.00 3.55
4822 18512 7.712205 CAGAGATGTCATATGAATTACACACCA 59.288 37.037 7.07 0.00 0.00 4.17
4823 18513 7.712639 ACAGAGATGTCATATGAATTACACACC 59.287 37.037 7.07 0.00 0.00 4.16
4824 18514 8.654230 ACAGAGATGTCATATGAATTACACAC 57.346 34.615 7.07 0.94 0.00 3.82
4825 18515 8.477256 TGACAGAGATGTCATATGAATTACACA 58.523 33.333 7.07 0.79 43.09 3.72
4826 18516 8.877808 TGACAGAGATGTCATATGAATTACAC 57.122 34.615 7.07 0.00 43.09 2.90
4827 18517 9.889128 TTTGACAGAGATGTCATATGAATTACA 57.111 29.630 7.07 1.97 46.61 2.41
4831 18521 9.623000 TGAATTTGACAGAGATGTCATATGAAT 57.377 29.630 7.07 3.68 46.61 2.57
4832 18522 9.452287 TTGAATTTGACAGAGATGTCATATGAA 57.548 29.630 7.07 4.20 46.61 2.57
4833 18523 9.106070 CTTGAATTTGACAGAGATGTCATATGA 57.894 33.333 11.53 0.00 46.61 2.15
4834 18524 7.856398 GCTTGAATTTGACAGAGATGTCATATG 59.144 37.037 11.53 0.00 46.61 1.78
4835 18525 7.013083 GGCTTGAATTTGACAGAGATGTCATAT 59.987 37.037 11.53 9.62 46.61 1.78
4836 18526 6.317140 GGCTTGAATTTGACAGAGATGTCATA 59.683 38.462 11.53 7.79 46.61 2.15
4837 18527 5.125097 GGCTTGAATTTGACAGAGATGTCAT 59.875 40.000 11.53 0.00 46.61 3.06
4838 18528 4.456911 GGCTTGAATTTGACAGAGATGTCA 59.543 41.667 6.97 6.97 45.85 3.58
4839 18529 4.456911 TGGCTTGAATTTGACAGAGATGTC 59.543 41.667 1.44 1.44 39.15 3.06
4840 18530 4.401022 TGGCTTGAATTTGACAGAGATGT 58.599 39.130 0.00 0.00 0.00 3.06
4841 18531 5.048224 ACTTGGCTTGAATTTGACAGAGATG 60.048 40.000 0.00 0.00 0.00 2.90
4842 18532 5.075493 ACTTGGCTTGAATTTGACAGAGAT 58.925 37.500 0.00 0.00 0.00 2.75
4843 18533 4.464008 ACTTGGCTTGAATTTGACAGAGA 58.536 39.130 0.00 0.00 0.00 3.10
4844 18534 4.276678 TGACTTGGCTTGAATTTGACAGAG 59.723 41.667 0.00 0.00 0.00 3.35
4845 18535 4.206375 TGACTTGGCTTGAATTTGACAGA 58.794 39.130 0.00 0.00 0.00 3.41
4846 18536 4.572985 TGACTTGGCTTGAATTTGACAG 57.427 40.909 0.00 0.00 0.00 3.51
4847 18537 4.998671 TTGACTTGGCTTGAATTTGACA 57.001 36.364 0.00 0.00 0.00 3.58
4848 18538 7.945033 TTAATTGACTTGGCTTGAATTTGAC 57.055 32.000 0.00 0.00 0.00 3.18
4849 18539 8.991026 CAATTAATTGACTTGGCTTGAATTTGA 58.009 29.630 21.35 0.00 40.14 2.69
4850 18540 7.747357 GCAATTAATTGACTTGGCTTGAATTTG 59.253 33.333 28.33 0.91 40.14 2.32
4851 18541 7.662669 AGCAATTAATTGACTTGGCTTGAATTT 59.337 29.630 28.33 0.93 40.14 1.82
4852 18542 7.163441 AGCAATTAATTGACTTGGCTTGAATT 58.837 30.769 28.33 1.09 40.14 2.17
4853 18543 6.704310 AGCAATTAATTGACTTGGCTTGAAT 58.296 32.000 28.33 1.51 40.14 2.57
4854 18544 6.100404 AGCAATTAATTGACTTGGCTTGAA 57.900 33.333 28.33 0.00 40.14 2.69
4855 18545 5.726980 AGCAATTAATTGACTTGGCTTGA 57.273 34.783 28.33 0.00 40.14 3.02
4856 18546 9.585099 TTATAAGCAATTAATTGACTTGGCTTG 57.415 29.630 28.75 9.64 40.14 4.01
4857 18547 9.586435 GTTATAAGCAATTAATTGACTTGGCTT 57.414 29.630 28.75 24.36 40.14 4.35
4858 18548 8.971073 AGTTATAAGCAATTAATTGACTTGGCT 58.029 29.630 28.75 18.75 40.14 4.75
4874 18564 9.086758 GGGTAAACCTAGAGATAGTTATAAGCA 57.913 37.037 0.00 0.00 35.85 3.91
4875 18565 8.242739 CGGGTAAACCTAGAGATAGTTATAAGC 58.757 40.741 0.00 0.00 36.97 3.09
4876 18566 8.242739 GCGGGTAAACCTAGAGATAGTTATAAG 58.757 40.741 0.00 0.00 36.97 1.73
4877 18567 7.725397 TGCGGGTAAACCTAGAGATAGTTATAA 59.275 37.037 0.00 0.00 36.97 0.98
4878 18568 7.233632 TGCGGGTAAACCTAGAGATAGTTATA 58.766 38.462 0.00 0.00 36.97 0.98
4879 18569 6.073314 TGCGGGTAAACCTAGAGATAGTTAT 58.927 40.000 0.00 0.00 36.97 1.89
4880 18570 5.448654 TGCGGGTAAACCTAGAGATAGTTA 58.551 41.667 0.00 0.00 36.97 2.24
4881 18571 4.284178 TGCGGGTAAACCTAGAGATAGTT 58.716 43.478 0.00 0.00 36.97 2.24
4882 18572 3.907221 TGCGGGTAAACCTAGAGATAGT 58.093 45.455 0.00 0.00 36.97 2.12
4883 18573 4.931661 TTGCGGGTAAACCTAGAGATAG 57.068 45.455 0.00 0.00 36.97 2.08
4884 18574 5.188359 AGTTTTGCGGGTAAACCTAGAGATA 59.812 40.000 0.00 0.00 36.40 1.98
4885 18575 4.019591 AGTTTTGCGGGTAAACCTAGAGAT 60.020 41.667 0.00 0.00 36.40 2.75
4886 18576 3.325716 AGTTTTGCGGGTAAACCTAGAGA 59.674 43.478 0.00 0.00 36.40 3.10
4887 18577 3.671716 AGTTTTGCGGGTAAACCTAGAG 58.328 45.455 0.00 0.00 36.40 2.43
4888 18578 3.775261 AGTTTTGCGGGTAAACCTAGA 57.225 42.857 0.00 0.00 36.40 2.43
4889 18579 3.566742 ACAAGTTTTGCGGGTAAACCTAG 59.433 43.478 0.00 0.00 36.40 3.02
4890 18580 3.553904 ACAAGTTTTGCGGGTAAACCTA 58.446 40.909 0.00 0.00 36.40 3.08
4891 18581 2.380941 ACAAGTTTTGCGGGTAAACCT 58.619 42.857 0.00 0.00 36.40 3.50
4892 18582 2.875087 ACAAGTTTTGCGGGTAAACC 57.125 45.000 0.00 0.00 36.40 3.27
4893 18583 6.644191 TTTAAACAAGTTTTGCGGGTAAAC 57.356 33.333 3.25 0.00 36.08 2.01
4894 18584 5.291371 GCTTTAAACAAGTTTTGCGGGTAAA 59.709 36.000 3.25 0.00 34.23 2.01
4895 18585 4.804665 GCTTTAAACAAGTTTTGCGGGTAA 59.195 37.500 3.25 0.00 34.23 2.85
4896 18586 4.142227 TGCTTTAAACAAGTTTTGCGGGTA 60.142 37.500 3.25 0.00 34.23 3.69
4897 18587 3.191669 GCTTTAAACAAGTTTTGCGGGT 58.808 40.909 3.25 0.00 34.23 5.28
4898 18588 3.190874 TGCTTTAAACAAGTTTTGCGGG 58.809 40.909 3.25 0.00 34.23 6.13
4899 18589 5.689961 ACTATGCTTTAAACAAGTTTTGCGG 59.310 36.000 3.25 4.59 34.23 5.69
4900 18590 6.747659 ACTATGCTTTAAACAAGTTTTGCG 57.252 33.333 3.25 0.00 34.23 4.85
4901 18591 9.420966 GAAAACTATGCTTTAAACAAGTTTTGC 57.579 29.630 24.02 18.36 43.45 3.68
4905 18595 9.659830 CGTAGAAAACTATGCTTTAAACAAGTT 57.340 29.630 0.00 0.06 0.00 2.66
4906 18596 9.048446 TCGTAGAAAACTATGCTTTAAACAAGT 57.952 29.630 0.00 0.00 0.00 3.16
4907 18597 9.314501 GTCGTAGAAAACTATGCTTTAAACAAG 57.685 33.333 0.00 0.00 39.69 3.16
4908 18598 8.828644 TGTCGTAGAAAACTATGCTTTAAACAA 58.171 29.630 0.00 0.00 39.69 2.83
4909 18599 8.367943 TGTCGTAGAAAACTATGCTTTAAACA 57.632 30.769 0.00 0.00 39.69 2.83
4910 18600 9.654417 TTTGTCGTAGAAAACTATGCTTTAAAC 57.346 29.630 0.00 0.00 39.69 2.01
4911 18601 9.654417 GTTTGTCGTAGAAAACTATGCTTTAAA 57.346 29.630 0.00 0.00 39.69 1.52
4912 18602 8.005466 CGTTTGTCGTAGAAAACTATGCTTTAA 58.995 33.333 0.00 0.00 39.69 1.52
4913 18603 7.503991 CGTTTGTCGTAGAAAACTATGCTTTA 58.496 34.615 0.00 0.00 39.69 1.85
5002 18692 3.593096 GTGCAGAGTGAAGATCATGACA 58.407 45.455 0.00 0.00 0.00 3.58
5052 18742 0.249120 CAAGTGCCGGTGATGGACTA 59.751 55.000 1.90 0.00 0.00 2.59
5098 18788 0.106149 GGAGTTGGAACCAGTGTCGT 59.894 55.000 0.00 0.00 0.00 4.34
5131 18842 1.296056 GGGTGTTTCGGTGTCGATGG 61.296 60.000 0.00 0.00 45.51 3.51
5134 18845 2.027897 CGGGTGTTTCGGTGTCGA 59.972 61.111 0.00 0.00 44.44 4.20
5151 18863 0.603065 GGACAACATCACCAAAGGCC 59.397 55.000 0.00 0.00 0.00 5.19
5152 18864 1.327303 TGGACAACATCACCAAAGGC 58.673 50.000 0.00 0.00 0.00 4.35
5166 18934 1.164411 GAACCGCAATGACATGGACA 58.836 50.000 0.00 0.00 0.00 4.02
5187 18955 3.862267 CGAGGAGAACAAGATCATGACAC 59.138 47.826 4.68 0.00 0.00 3.67
5198 18966 2.897969 AGCTTCTTACCGAGGAGAACAA 59.102 45.455 0.00 0.00 32.05 2.83
5211 18979 0.332632 AGCCATGGCCAAGCTTCTTA 59.667 50.000 33.14 0.00 43.17 2.10
5301 19069 4.039730 CACAAGAGAAGGAAGAGAAGTGGA 59.960 45.833 0.00 0.00 0.00 4.02
5313 19081 3.333804 GAGAAGAAGGCACAAGAGAAGG 58.666 50.000 0.00 0.00 0.00 3.46
5346 19114 3.119495 GGCGAATACATTGAAGGCAAAGT 60.119 43.478 0.00 0.00 39.13 2.66
5355 19123 4.699735 AGTTGATGTTGGCGAATACATTGA 59.300 37.500 0.00 0.00 35.24 2.57
5362 19130 4.789012 AAATGAGTTGATGTTGGCGAAT 57.211 36.364 0.00 0.00 0.00 3.34
5384 19152 4.645863 AGATAGATGCCATGGTGCAATA 57.354 40.909 14.67 4.42 45.84 1.90
5409 19177 2.019408 CACATGTTCGTCGCACCGA 61.019 57.895 0.00 0.00 34.52 4.69
5410 19178 2.307309 ACACATGTTCGTCGCACCG 61.307 57.895 0.00 0.00 0.00 4.94
5411 19179 1.204062 CACACATGTTCGTCGCACC 59.796 57.895 0.00 0.00 0.00 5.01
5412 19180 0.303493 AACACACATGTTCGTCGCAC 59.697 50.000 0.00 0.00 46.46 5.34
5413 19181 2.684128 AACACACATGTTCGTCGCA 58.316 47.368 0.00 0.00 46.46 5.10
5428 19196 0.981183 ATAAGTCAGGGTGGCGAACA 59.019 50.000 0.00 0.00 0.00 3.18
5429 19197 1.369625 CATAAGTCAGGGTGGCGAAC 58.630 55.000 0.00 0.00 0.00 3.95
5430 19198 0.392461 GCATAAGTCAGGGTGGCGAA 60.392 55.000 0.00 0.00 0.00 4.70
5431 19199 1.220749 GCATAAGTCAGGGTGGCGA 59.779 57.895 0.00 0.00 0.00 5.54
5432 19200 1.078497 TGCATAAGTCAGGGTGGCG 60.078 57.895 0.00 0.00 0.00 5.69
5433 19201 1.032114 GGTGCATAAGTCAGGGTGGC 61.032 60.000 0.00 0.00 0.00 5.01
5434 19202 0.744414 CGGTGCATAAGTCAGGGTGG 60.744 60.000 0.00 0.00 0.00 4.61
5435 19203 0.744414 CCGGTGCATAAGTCAGGGTG 60.744 60.000 0.00 0.00 0.00 4.61
5436 19204 1.602237 CCGGTGCATAAGTCAGGGT 59.398 57.895 0.00 0.00 0.00 4.34
5437 19205 1.819632 GCCGGTGCATAAGTCAGGG 60.820 63.158 1.90 0.00 37.47 4.45
5438 19206 2.173669 CGCCGGTGCATAAGTCAGG 61.174 63.158 0.00 0.00 37.32 3.86
5439 19207 0.179121 TACGCCGGTGCATAAGTCAG 60.179 55.000 16.69 0.00 37.32 3.51
5440 19208 0.458889 GTACGCCGGTGCATAAGTCA 60.459 55.000 16.69 0.00 37.32 3.41
5441 19209 1.477030 CGTACGCCGGTGCATAAGTC 61.477 60.000 16.69 0.00 37.32 3.01
5442 19210 1.517694 CGTACGCCGGTGCATAAGT 60.518 57.895 16.69 0.00 37.32 2.24
5443 19211 1.226745 TCGTACGCCGGTGCATAAG 60.227 57.895 16.69 3.49 37.32 1.73
5444 19212 1.516821 GTCGTACGCCGGTGCATAA 60.517 57.895 16.69 0.00 37.32 1.90
5445 19213 2.102749 GTCGTACGCCGGTGCATA 59.897 61.111 16.69 0.00 37.32 3.14
5446 19214 3.576932 TTGTCGTACGCCGGTGCAT 62.577 57.895 16.69 0.00 37.32 3.96
5447 19215 4.281947 TTGTCGTACGCCGGTGCA 62.282 61.111 16.69 0.00 37.32 4.57
5448 19216 3.475774 CTTGTCGTACGCCGGTGC 61.476 66.667 16.69 0.00 37.11 5.01
5449 19217 2.049802 ACTTGTCGTACGCCGGTG 60.050 61.111 14.93 14.93 37.11 4.94
5450 19218 2.256461 GACTTGTCGTACGCCGGT 59.744 61.111 11.24 2.08 37.11 5.28
5451 19219 2.239341 TACGACTTGTCGTACGCCGG 62.239 60.000 25.77 0.00 45.19 6.13
5452 19220 1.132436 TACGACTTGTCGTACGCCG 59.868 57.895 25.77 9.06 45.19 6.46
5457 19225 7.973601 TGATACTAAATGTACGACTTGTCGTA 58.026 34.615 25.77 25.77 45.19 3.43
5459 19227 7.044249 CCTTGATACTAAATGTACGACTTGTCG 60.044 40.741 19.74 19.74 33.45 4.35
5460 19228 7.254017 GCCTTGATACTAAATGTACGACTTGTC 60.254 40.741 0.00 0.00 33.45 3.18
5461 19229 6.534079 GCCTTGATACTAAATGTACGACTTGT 59.466 38.462 0.00 0.00 33.45 3.16
5462 19230 6.757010 AGCCTTGATACTAAATGTACGACTTG 59.243 38.462 0.00 0.00 33.45 3.16
5463 19231 6.875076 AGCCTTGATACTAAATGTACGACTT 58.125 36.000 0.00 0.00 33.45 3.01
5464 19232 6.466885 AGCCTTGATACTAAATGTACGACT 57.533 37.500 0.00 0.00 33.45 4.18
5465 19233 6.509677 GCAAGCCTTGATACTAAATGTACGAC 60.510 42.308 9.04 0.00 33.45 4.34
5466 19234 5.522460 GCAAGCCTTGATACTAAATGTACGA 59.478 40.000 9.04 0.00 33.45 3.43
5467 19235 5.523916 AGCAAGCCTTGATACTAAATGTACG 59.476 40.000 9.04 0.00 33.45 3.67
5468 19236 6.316390 ACAGCAAGCCTTGATACTAAATGTAC 59.684 38.462 9.04 0.00 33.45 2.90
5469 19237 6.414732 ACAGCAAGCCTTGATACTAAATGTA 58.585 36.000 9.04 0.00 35.37 2.29
5470 19238 5.256474 ACAGCAAGCCTTGATACTAAATGT 58.744 37.500 9.04 0.00 0.00 2.71
5471 19239 5.824904 ACAGCAAGCCTTGATACTAAATG 57.175 39.130 9.04 0.00 0.00 2.32
5472 19240 7.338710 TCTTACAGCAAGCCTTGATACTAAAT 58.661 34.615 9.04 0.00 33.94 1.40
5473 19241 6.707290 TCTTACAGCAAGCCTTGATACTAAA 58.293 36.000 9.04 0.00 33.94 1.85
5474 19242 6.294361 TCTTACAGCAAGCCTTGATACTAA 57.706 37.500 9.04 0.63 33.94 2.24
5475 19243 5.932619 TCTTACAGCAAGCCTTGATACTA 57.067 39.130 9.04 0.00 33.94 1.82
5476 19244 4.826274 TCTTACAGCAAGCCTTGATACT 57.174 40.909 9.04 0.00 33.94 2.12
5477 19245 5.118990 TCATCTTACAGCAAGCCTTGATAC 58.881 41.667 9.04 0.00 33.94 2.24
5478 19246 5.357742 TCATCTTACAGCAAGCCTTGATA 57.642 39.130 9.04 0.00 33.94 2.15
5479 19247 4.197750 CTCATCTTACAGCAAGCCTTGAT 58.802 43.478 9.04 0.00 33.94 2.57
5480 19248 3.603532 CTCATCTTACAGCAAGCCTTGA 58.396 45.455 9.04 0.00 33.94 3.02
5481 19249 2.097142 GCTCATCTTACAGCAAGCCTTG 59.903 50.000 0.00 0.00 35.56 3.61
5482 19250 2.290514 TGCTCATCTTACAGCAAGCCTT 60.291 45.455 0.00 0.00 42.74 4.35
5483 19251 1.280133 TGCTCATCTTACAGCAAGCCT 59.720 47.619 0.00 0.00 42.74 4.58
5484 19252 1.742761 TGCTCATCTTACAGCAAGCC 58.257 50.000 0.00 0.00 42.74 4.35
5488 19256 4.502016 CTTCTCTTGCTCATCTTACAGCA 58.498 43.478 0.00 0.00 44.02 4.41
5489 19257 3.309410 GCTTCTCTTGCTCATCTTACAGC 59.691 47.826 0.00 0.00 36.08 4.40
5490 19258 3.870419 GGCTTCTCTTGCTCATCTTACAG 59.130 47.826 0.00 0.00 0.00 2.74
5491 19259 3.677148 CGGCTTCTCTTGCTCATCTTACA 60.677 47.826 0.00 0.00 0.00 2.41
5492 19260 2.863137 CGGCTTCTCTTGCTCATCTTAC 59.137 50.000 0.00 0.00 0.00 2.34
5493 19261 2.739932 GCGGCTTCTCTTGCTCATCTTA 60.740 50.000 0.00 0.00 0.00 2.10
5494 19262 2.011046 GCGGCTTCTCTTGCTCATCTT 61.011 52.381 0.00 0.00 0.00 2.40
5495 19263 0.461693 GCGGCTTCTCTTGCTCATCT 60.462 55.000 0.00 0.00 0.00 2.90
5496 19264 0.461693 AGCGGCTTCTCTTGCTCATC 60.462 55.000 0.00 0.00 30.37 2.92
5497 19265 1.601171 AGCGGCTTCTCTTGCTCAT 59.399 52.632 0.00 0.00 30.37 2.90
5498 19266 3.063526 AGCGGCTTCTCTTGCTCA 58.936 55.556 0.00 0.00 30.37 4.26
5499 19267 3.792904 GAGCGGCTTCTCTTGCTC 58.207 61.111 2.97 0.00 45.95 4.26
5500 19268 3.386592 AGAGCGGCTTCTCTTGCT 58.613 55.556 2.97 0.00 40.32 3.91
5507 19275 4.651165 TGATCTCACGAAGAGCGGCTTC 62.651 54.545 2.97 11.05 43.60 3.86
5508 19276 0.179124 GATCTCACGAAGAGCGGCTT 60.179 55.000 2.97 0.00 46.49 4.35
5509 19277 1.315981 TGATCTCACGAAGAGCGGCT 61.316 55.000 0.00 0.00 43.60 5.52
5510 19278 0.458543 TTGATCTCACGAAGAGCGGC 60.459 55.000 0.00 0.00 43.60 6.53
5511 19279 1.554392 CTTGATCTCACGAAGAGCGG 58.446 55.000 0.00 0.00 43.60 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.