AutoCloner

Multiple sequence alignment - TraesCS6B01G065000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS6B01G065000	chr6B	100.000	3405	0	0	1	3405	43143842	43147246	0.000000e+00	6288.0
1	TraesCS6B01G065000	chr6B	83.356	1502	201	24	904	2376	42855435	42856916	0.000000e+00	1343.0
2	TraesCS6B01G065000	chr6B	81.638	1465	208	40	960	2376	42860606	42862057	0.000000e+00	1158.0
3	TraesCS6B01G065000	chr6B	83.347	1213	176	14	997	2193	43090146	43088944	0.000000e+00	1098.0
4	TraesCS6B01G065000	chr6B	93.594	281	18	0	546	826	43143723	43143443	1.460000e-113	420.0
5	TraesCS6B01G065000	chr6B	82.178	303	41	10	2408	2705	42857106	42857400	7.300000e-62	248.0
6	TraesCS6B01G065000	chr6B	84.615	130	15	3	2580	2705	43071733	43071605	1.280000e-24	124.0
7	TraesCS6B01G065000	chr6B	89.888	89	9	0	2902	2990	42858948	42859036	7.720000e-22	115.0
8	TraesCS6B01G065000	chr6B	85.897	78	6	2	2827	2901	42857495	42857570	1.010000e-10	78.7
9	TraesCS6B01G065000	chr6B	100.000	39	0	0	3092	3130	42859192	42859230	4.710000e-09	73.1
10	TraesCS6B01G065000	chr6B	84.810	79	5	4	2827	2901	43071515	43071440	4.710000e-09	73.1
11	TraesCS6B01G065000	chrUn	90.272	1583	114	18	1492	3071	93939363	93940908	0.000000e+00	2034.0
12	TraesCS6B01G065000	chrUn	81.904	1796	245	41	940	2705	93869405	93871150	0.000000e+00	1443.0
13	TraesCS6B01G065000	chrUn	80.605	1454	221	34	944	2376	93876845	93878258	0.000000e+00	1066.0
14	TraesCS6B01G065000	chrUn	82.067	1277	178	22	1133	2376	93879955	93881213	0.000000e+00	1042.0
15	TraesCS6B01G065000	chrUn	88.732	142	12	2	3058	3199	93940930	93941067	1.620000e-38	171.0
16	TraesCS6B01G065000	chrUn	84.615	78	7	2	2827	2901	93871245	93871320	4.710000e-09	73.1
17	TraesCS6B01G065000	chrUn	100.000	30	0	0	882	911	93939262	93939291	4.750000e-04	56.5
18	TraesCS6B01G065000	chr6A	91.678	1454	78	20	882	2307	24705396	24706834	0.000000e+00	1975.0
19	TraesCS6B01G065000	chr6A	80.703	1109	157	30	1291	2376	24571349	24572423	0.000000e+00	809.0
20	TraesCS6B01G065000	chr6A	92.841	433	22	9	2275	2705	24706835	24707260	1.340000e-173	619.0
21	TraesCS6B01G065000	chr6A	81.395	774	118	15	960	1713	24573863	24574630	2.910000e-170	608.0
22	TraesCS6B01G065000	chr6A	91.000	200	12	3	2867	3066	24707451	24707644	7.240000e-67	265.0
23	TraesCS6B01G065000	chr6A	88.444	225	19	5	3057	3278	24707671	24707891	7.240000e-67	265.0
24	TraesCS6B01G065000	chr6A	85.714	238	34	0	589	826	99791542	99791779	5.640000e-63	252.0
25	TraesCS6B01G065000	chr6A	93.069	101	4	1	3291	3388	24707942	24708042	9.850000e-31	145.0
26	TraesCS6B01G065000	chr6A	84.553	123	9	7	2783	2901	24707277	24707393	2.780000e-21	113.0
27	TraesCS6B01G065000	chr7B	76.261	1348	252	45	882	2182	6375087	6373761	0.000000e+00	654.0
28	TraesCS6B01G065000	chr7A	76.033	1331	246	52	908	2182	68901975	68900662	1.040000e-174	623.0
29	TraesCS6B01G065000	chr3B	92.063	441	35	0	386	826	772147549	772147109	3.730000e-174	621.0
30	TraesCS6B01G065000	chr3B	94.534	311	11	4	78	388	772159958	772159654	3.070000e-130	475.0
31	TraesCS6B01G065000	chr3B	91.319	288	23	1	541	826	772160114	772160401	3.190000e-105	392.0
32	TraesCS6B01G065000	chr3B	100.000	58	0	0	1	58	772160002	772159945	1.290000e-19	108.0
33	TraesCS6B01G065000	chr4B	89.895	475	16	11	106	552	20587806	20588276	1.760000e-162	582.0
34	TraesCS6B01G065000	chr4D	87.967	482	23	7	106	552	10930630	10931111	1.390000e-148	536.0
35	TraesCS6B01G065000	chr4A	84.177	474	36	19	106	552	591698849	591699310	1.130000e-114	424.0
36	TraesCS6B01G065000	chr2B	90.625	256	20	3	571	826	666078724	666078473	1.510000e-88	337.0
37	TraesCS6B01G065000	chr2B	89.804	255	25	1	572	826	666079657	666079910	3.280000e-85	326.0
38	TraesCS6B01G065000	chr2B	86.891	267	32	3	563	827	45541297	45541032	2.570000e-76	296.0
39	TraesCS6B01G065000	chr7D	82.203	354	53	7	894	1243	64468258	64467911	2.570000e-76	296.0
40	TraesCS6B01G065000	chr3D	86.555	238	32	0	589	826	609961551	609961314	2.610000e-66	263.0
41	TraesCS6B01G065000	chr5B	84.706	255	36	3	574	826	489098832	489099085	5.640000e-63	252.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS6B01G065000	chr6B	43143842	43147246	3404	False	6288.000000	6288	100.000000	1	3405	1	chr6B.!!$F1	3404
1	TraesCS6B01G065000	chr6B	43088944	43090146	1202	True	1098.000000	1098	83.347000	997	2193	1	chr6B.!!$R1	1196
2	TraesCS6B01G065000	chr6B	42855435	42862057	6622	False	502.633333	1343	87.159500	904	3130	6	chr6B.!!$F2	2226
3	TraesCS6B01G065000	chrUn	93876845	93881213	4368	False	1054.000000	1066	81.336000	944	2376	2	chrUn.!!$F2	1432
4	TraesCS6B01G065000	chrUn	93869405	93871320	1915	False	758.050000	1443	83.259500	940	2901	2	chrUn.!!$F1	1961
5	TraesCS6B01G065000	chrUn	93939262	93941067	1805	False	753.833333	2034	93.001333	882	3199	3	chrUn.!!$F3	2317
6	TraesCS6B01G065000	chr6A	24571349	24574630	3281	False	708.500000	809	81.049000	960	2376	2	chr6A.!!$F2	1416
7	TraesCS6B01G065000	chr6A	24705396	24708042	2646	False	563.666667	1975	90.264167	882	3388	6	chr6A.!!$F3	2506
8	TraesCS6B01G065000	chr7B	6373761	6375087	1326	True	654.000000	654	76.261000	882	2182	1	chr7B.!!$R1	1300
9	TraesCS6B01G065000	chr7A	68900662	68901975	1313	True	623.000000	623	76.033000	908	2182	1	chr7A.!!$R1	1274

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
702	703	0.030369	CGCTAGATACCTCGGCGTTT	59.970	55.000	6.85	40.7	3.60	F
1031	3759	0.105913	AAACCCACGGACACCCAAAT	60.106	50.000	0.00	0.0	2.32	F
1755	4752	1.968540	GTGGCGCCTGAAGAAGCTT	60.969	57.895	29.70	0.0	3.74	F

Position	MSA Position	Penalty	Sequence	TM	GC	End Stability	Orientation
1935	4937	0.036388	TCTCCACTTTCACCCATCGC	60.036	55.000	4.58	R
2049	5051	1.065345	TCGTCAACCTCACCCACAAAA	60.065	47.619	2.44	R
3272	8570	0.390998	GCTTCTGCCAGGTGAGAGAC	60.391	60.000	3.36	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
17	18	4.152644	ATCCATGCATGAGCGGTG	57.847	55.556	28.31	10.06	46.23	4.94
18	19	1.527611	ATCCATGCATGAGCGGTGG	60.528	57.895	28.31	11.24	45.35	4.61
19	20	2.274948	ATCCATGCATGAGCGGTGGT	62.275	55.000	28.31	3.09	44.70	4.16
20	21	2.048023	CCATGCATGAGCGGTGGTT	61.048	57.895	28.31	0.00	46.23	3.67
21	22	1.138036	CATGCATGAGCGGTGGTTG	59.862	57.895	22.59	0.00	46.23	3.77
22	23	2.703798	ATGCATGAGCGGTGGTTGC	61.704	57.895	0.00	0.00	46.23	4.17
23	24	3.364441	GCATGAGCGGTGGTTGCA	61.364	61.111	0.00	0.00	33.58	4.08
24	25	2.703798	GCATGAGCGGTGGTTGCAT	61.704	57.895	0.00	0.00	33.58	3.96
25	26	1.885157	CATGAGCGGTGGTTGCATT	59.115	52.632	0.00	0.00	33.85	3.56
26	27	0.457166	CATGAGCGGTGGTTGCATTG	60.457	55.000	0.00	0.00	33.85	2.82
27	28	2.126346	GAGCGGTGGTTGCATTGC	60.126	61.111	0.46	0.46	33.85	3.56
28	29	2.911509	AGCGGTGGTTGCATTGCA	60.912	55.556	7.38	7.38	36.47	4.08
29	30	2.216750	GAGCGGTGGTTGCATTGCAT	62.217	55.000	12.95	0.00	38.76	3.96
30	31	1.374505	GCGGTGGTTGCATTGCATT	60.375	52.632	12.95	0.00	38.76	3.56
31	32	0.950071	GCGGTGGTTGCATTGCATTT	60.950	50.000	12.95	0.00	38.76	2.32
32	33	0.791422	CGGTGGTTGCATTGCATTTG	59.209	50.000	12.95	0.00	38.76	2.32
33	34	0.518195	GGTGGTTGCATTGCATTTGC	59.482	50.000	12.95	13.65	38.76	3.68
50	51	2.745100	CATGCGTGCAGAGGCTGT	60.745	61.111	0.00	0.00	41.91	4.40
51	52	1.448365	CATGCGTGCAGAGGCTGTA	60.448	57.895	0.00	0.00	41.91	2.74
52	53	1.448540	ATGCGTGCAGAGGCTGTAC	60.449	57.895	0.00	5.71	42.21	2.90
55	56	2.125512	GTGCAGAGGCTGTACGGG	60.126	66.667	3.34	0.00	37.35	5.28
56	57	4.082523	TGCAGAGGCTGTACGGGC	62.083	66.667	20.19	20.19	41.91	6.13
57	58	3.775654	GCAGAGGCTGTACGGGCT	61.776	66.667	29.33	29.33	44.87	5.19
58	59	2.982130	CAGAGGCTGTACGGGCTT	59.018	61.111	29.48	17.23	42.23	4.35
59	60	1.296715	CAGAGGCTGTACGGGCTTT	59.703	57.895	29.48	22.28	42.23	3.51
60	61	0.321653	CAGAGGCTGTACGGGCTTTT	60.322	55.000	29.48	18.78	42.23	2.27
61	62	0.400594	AGAGGCTGTACGGGCTTTTT	59.599	50.000	29.48	16.49	42.23	1.94
86	87	8.568732	TTTTTCTTTGAAAATAAGGCTGTACG	57.431	30.769	6.35	0.00	0.00	3.67
87	88	5.873179	TCTTTGAAAATAAGGCTGTACGG	57.127	39.130	0.00	0.00	0.00	4.02
88	89	4.698304	TCTTTGAAAATAAGGCTGTACGGG	59.302	41.667	3.34	0.00	0.00	5.28
89	90	2.361789	TGAAAATAAGGCTGTACGGGC	58.638	47.619	20.19	20.19	0.00	6.13
90	91	2.026636	TGAAAATAAGGCTGTACGGGCT	60.027	45.455	24.29	24.29	44.08	5.19
91	92	3.198200	TGAAAATAAGGCTGTACGGGCTA	59.802	43.478	29.16	17.81	41.31	3.93
92	93	3.470645	AAATAAGGCTGTACGGGCTAG	57.529	47.619	29.16	1.74	41.31	3.42
93	94	1.339097	ATAAGGCTGTACGGGCTAGG	58.661	55.000	29.16	0.00	41.31	3.02
94	95	0.259647	TAAGGCTGTACGGGCTAGGA	59.740	55.000	29.16	15.72	41.31	2.94
95	96	1.043673	AAGGCTGTACGGGCTAGGAG	61.044	60.000	29.16	0.00	41.31	3.69
96	97	1.757340	GGCTGTACGGGCTAGGAGT	60.757	63.158	20.46	0.00	0.00	3.85
97	98	1.437986	GCTGTACGGGCTAGGAGTG	59.562	63.158	3.34	0.00	0.00	3.51
98	99	1.437986	CTGTACGGGCTAGGAGTGC	59.562	63.158	0.00	0.00	0.00	4.40
99	100	2.337749	CTGTACGGGCTAGGAGTGCG	62.338	65.000	0.00	0.00	0.00	5.34
100	101	2.831742	TACGGGCTAGGAGTGCGG	60.832	66.667	0.00	0.00	0.00	5.69
105	106	3.917760	GCTAGGAGTGCGGCGGAT	61.918	66.667	9.78	0.00	0.00	4.18
106	107	2.336809	CTAGGAGTGCGGCGGATC	59.663	66.667	9.78	5.66	0.00	3.36
107	108	3.544167	CTAGGAGTGCGGCGGATCG	62.544	68.421	9.78	0.00	0.00	3.69
148	149	3.692406	GGCGTCCGTCACCCTCTT	61.692	66.667	0.00	0.00	0.00	2.85
149	150	2.126031	GCGTCCGTCACCCTCTTC	60.126	66.667	0.00	0.00	0.00	2.87
150	151	2.178521	CGTCCGTCACCCTCTTCG	59.821	66.667	0.00	0.00	0.00	3.79
151	152	2.572284	GTCCGTCACCCTCTTCGG	59.428	66.667	0.00	0.00	43.65	4.30
152	153	3.379445	TCCGTCACCCTCTTCGGC	61.379	66.667	0.00	0.00	42.28	5.54
153	154	4.796231	CCGTCACCCTCTTCGGCG	62.796	72.222	0.00	0.00	36.68	6.46
154	155	4.796231	CGTCACCCTCTTCGGCGG	62.796	72.222	7.21	0.00	0.00	6.13
189	190	2.736995	GCGTGTAGCGGCTCAACA	60.737	61.111	5.39	3.11	41.69	3.33
190	191	2.314647	GCGTGTAGCGGCTCAACAA	61.315	57.895	5.39	0.00	41.69	2.83
191	192	1.635663	GCGTGTAGCGGCTCAACAAT	61.636	55.000	5.39	0.00	41.69	2.71
192	193	0.095245	CGTGTAGCGGCTCAACAATG	59.905	55.000	5.39	0.00	36.85	2.82
193	194	1.438651	GTGTAGCGGCTCAACAATGA	58.561	50.000	5.39	0.00	0.00	2.57
194	195	1.128692	GTGTAGCGGCTCAACAATGAC	59.871	52.381	5.39	0.00	0.00	3.06
195	196	1.001974	TGTAGCGGCTCAACAATGACT	59.998	47.619	5.39	0.00	0.00	3.41
196	197	1.661112	GTAGCGGCTCAACAATGACTC	59.339	52.381	5.39	0.00	0.00	3.36
197	198	0.674895	AGCGGCTCAACAATGACTCC	60.675	55.000	0.00	0.00	0.00	3.85
198	199	1.648467	GCGGCTCAACAATGACTCCC	61.648	60.000	0.00	0.00	0.00	4.30
199	200	0.036010	CGGCTCAACAATGACTCCCT	60.036	55.000	0.00	0.00	0.00	4.20
200	201	1.743996	GGCTCAACAATGACTCCCTC	58.256	55.000	0.00	0.00	0.00	4.30
201	202	1.003580	GGCTCAACAATGACTCCCTCA	59.996	52.381	0.00	0.00	0.00	3.86
202	203	2.079925	GCTCAACAATGACTCCCTCAC	58.920	52.381	0.00	0.00	0.00	3.51
203	204	2.704572	CTCAACAATGACTCCCTCACC	58.295	52.381	0.00	0.00	0.00	4.02
204	205	2.304180	CTCAACAATGACTCCCTCACCT	59.696	50.000	0.00	0.00	0.00	4.00
205	206	2.711009	TCAACAATGACTCCCTCACCTT	59.289	45.455	0.00	0.00	0.00	3.50
206	207	3.077359	CAACAATGACTCCCTCACCTTC	58.923	50.000	0.00	0.00	0.00	3.46
207	208	2.338809	ACAATGACTCCCTCACCTTCA	58.661	47.619	0.00	0.00	0.00	3.02
208	209	2.711009	ACAATGACTCCCTCACCTTCAA	59.289	45.455	0.00	0.00	0.00	2.69
209	210	3.077359	CAATGACTCCCTCACCTTCAAC	58.923	50.000	0.00	0.00	0.00	3.18
210	211	1.801242	TGACTCCCTCACCTTCAACA	58.199	50.000	0.00	0.00	0.00	3.33
211	212	1.416401	TGACTCCCTCACCTTCAACAC	59.584	52.381	0.00	0.00	0.00	3.32
212	213	0.765510	ACTCCCTCACCTTCAACACC	59.234	55.000	0.00	0.00	0.00	4.16
213	214	0.764890	CTCCCTCACCTTCAACACCA	59.235	55.000	0.00	0.00	0.00	4.17
214	215	1.142870	CTCCCTCACCTTCAACACCAA	59.857	52.381	0.00	0.00	0.00	3.67
215	216	1.142870	TCCCTCACCTTCAACACCAAG	59.857	52.381	0.00	0.00	0.00	3.61
216	217	0.954452	CCTCACCTTCAACACCAAGC	59.046	55.000	0.00	0.00	0.00	4.01
217	218	1.477558	CCTCACCTTCAACACCAAGCT	60.478	52.381	0.00	0.00	0.00	3.74
218	219	1.605710	CTCACCTTCAACACCAAGCTG	59.394	52.381	0.00	0.00	0.00	4.24
219	220	0.031178	CACCTTCAACACCAAGCTGC	59.969	55.000	0.00	0.00	0.00	5.25
220	221	0.395586	ACCTTCAACACCAAGCTGCA	60.396	50.000	1.02	0.00	0.00	4.41
221	222	0.313043	CCTTCAACACCAAGCTGCAG	59.687	55.000	10.11	10.11	0.00	4.41
222	223	0.313043	CTTCAACACCAAGCTGCAGG	59.687	55.000	17.12	5.97	0.00	4.85
223	224	1.737355	TTCAACACCAAGCTGCAGGC	61.737	55.000	17.12	7.98	42.19	4.85
245	246	4.735132	TCGGACGCGGCCAAGAAG	62.735	66.667	33.95	15.03	0.00	2.85
252	253	4.183686	CGGCCAAGAAGCGCCATG	62.184	66.667	2.29	0.00	46.04	3.66
253	254	3.830192	GGCCAAGAAGCGCCATGG	61.830	66.667	7.63	7.63	45.01	3.66
254	255	2.751436	GCCAAGAAGCGCCATGGA	60.751	61.111	18.40	0.00	34.82	3.41
255	256	3.056313	GCCAAGAAGCGCCATGGAC	62.056	63.158	18.40	6.50	34.82	4.02
256	257	1.675310	CCAAGAAGCGCCATGGACA	60.675	57.895	18.40	0.00	34.82	4.02
257	258	1.033746	CCAAGAAGCGCCATGGACAT	61.034	55.000	18.40	0.00	34.82	3.06
258	259	0.379669	CAAGAAGCGCCATGGACATC	59.620	55.000	18.40	9.14	0.00	3.06
259	260	0.254178	AAGAAGCGCCATGGACATCT	59.746	50.000	18.40	11.46	0.00	2.90
260	261	1.123077	AGAAGCGCCATGGACATCTA	58.877	50.000	18.40	0.00	0.00	1.98
261	262	1.202580	AGAAGCGCCATGGACATCTAC	60.203	52.381	18.40	0.00	0.00	2.59
262	263	0.530650	AAGCGCCATGGACATCTACG	60.531	55.000	18.40	8.73	0.00	3.51
263	264	1.067416	GCGCCATGGACATCTACGA	59.933	57.895	18.40	0.00	0.00	3.43
264	265	1.215655	GCGCCATGGACATCTACGAC	61.216	60.000	18.40	0.43	0.00	4.34
265	266	0.597637	CGCCATGGACATCTACGACC	60.598	60.000	18.40	0.00	0.00	4.79
266	267	0.249911	GCCATGGACATCTACGACCC	60.250	60.000	18.40	0.00	0.00	4.46
267	268	0.032130	CCATGGACATCTACGACCCG	59.968	60.000	5.56	0.00	0.00	5.28
268	269	0.597637	CATGGACATCTACGACCCGC	60.598	60.000	0.00	0.00	0.00	6.13
269	270	1.040893	ATGGACATCTACGACCCGCA	61.041	55.000	0.00	0.00	0.00	5.69
270	271	1.065928	GGACATCTACGACCCGCAG	59.934	63.158	0.00	0.00	0.00	5.18
271	272	1.589196	GACATCTACGACCCGCAGC	60.589	63.158	0.00	0.00	0.00	5.25
272	273	2.005960	GACATCTACGACCCGCAGCT	62.006	60.000	0.00	0.00	0.00	4.24
273	274	1.299468	CATCTACGACCCGCAGCTC	60.299	63.158	0.00	0.00	0.00	4.09
274	275	1.753078	ATCTACGACCCGCAGCTCA	60.753	57.895	0.00	0.00	0.00	4.26
275	276	1.320344	ATCTACGACCCGCAGCTCAA	61.320	55.000	0.00	0.00	0.00	3.02
276	277	1.805945	CTACGACCCGCAGCTCAAC	60.806	63.158	0.00	0.00	0.00	3.18
277	278	3.291101	TACGACCCGCAGCTCAACC	62.291	63.158	0.00	0.00	0.00	3.77
278	279	4.379243	CGACCCGCAGCTCAACCT	62.379	66.667	0.00	0.00	0.00	3.50
279	280	2.435059	GACCCGCAGCTCAACCTC	60.435	66.667	0.00	0.00	0.00	3.85
280	281	4.379243	ACCCGCAGCTCAACCTCG	62.379	66.667	0.00	0.00	0.00	4.63
281	282	4.379243	CCCGCAGCTCAACCTCGT	62.379	66.667	0.00	0.00	0.00	4.18
282	283	2.811317	CCGCAGCTCAACCTCGTC	60.811	66.667	0.00	0.00	0.00	4.20
283	284	3.175240	CGCAGCTCAACCTCGTCG	61.175	66.667	0.00	0.00	0.00	5.12
284	285	3.482783	GCAGCTCAACCTCGTCGC	61.483	66.667	0.00	0.00	0.00	5.19
285	286	2.811317	CAGCTCAACCTCGTCGCC	60.811	66.667	0.00	0.00	0.00	5.54
286	287	4.421479	AGCTCAACCTCGTCGCCG	62.421	66.667	0.00	0.00	0.00	6.46
287	288	4.415332	GCTCAACCTCGTCGCCGA	62.415	66.667	0.00	0.00	41.73	5.54
288	289	2.504244	CTCAACCTCGTCGCCGAC	60.504	66.667	7.29	7.29	38.40	4.79
289	290	3.263503	CTCAACCTCGTCGCCGACA	62.264	63.158	18.40	3.72	38.40	4.35
290	291	3.103911	CAACCTCGTCGCCGACAC	61.104	66.667	18.40	0.00	38.40	3.67
291	292	4.353437	AACCTCGTCGCCGACACC	62.353	66.667	18.40	0.00	38.40	4.16
293	294	4.129737	CCTCGTCGCCGACACCAT	62.130	66.667	18.40	0.00	38.40	3.55
294	295	2.880879	CTCGTCGCCGACACCATG	60.881	66.667	18.40	0.03	38.40	3.66
295	296	3.336715	CTCGTCGCCGACACCATGA	62.337	63.158	18.40	4.87	38.40	3.07
296	297	2.880879	CGTCGCCGACACCATGAG	60.881	66.667	18.40	0.00	35.63	2.90
297	298	3.188786	GTCGCCGACACCATGAGC	61.189	66.667	13.23	0.00	32.09	4.26
303	304	4.760047	GACACCATGAGCGCCGGT	62.760	66.667	2.29	2.61	0.00	5.28
304	305	3.365291	GACACCATGAGCGCCGGTA	62.365	63.158	2.29	0.00	0.00	4.02
305	306	2.890474	CACCATGAGCGCCGGTAC	60.890	66.667	2.29	0.00	0.00	3.34
327	328	3.823330	GTGATCCGTCCGACGCCT	61.823	66.667	15.64	4.34	40.91	5.52
328	329	3.822192	TGATCCGTCCGACGCCTG	61.822	66.667	15.64	2.42	40.91	4.85
329	330	4.570663	GATCCGTCCGACGCCTGG	62.571	72.222	15.64	2.05	40.91	4.45
333	334	3.751246	CGTCCGACGCCTGGGTAA	61.751	66.667	8.21	0.00	33.65	2.85
334	335	2.897972	GTCCGACGCCTGGGTAAT	59.102	61.111	0.00	0.00	0.00	1.89
335	336	1.520787	GTCCGACGCCTGGGTAATG	60.521	63.158	0.00	0.00	0.00	1.90
336	337	1.985662	TCCGACGCCTGGGTAATGT	60.986	57.895	0.00	0.00	0.00	2.71
337	338	1.813753	CCGACGCCTGGGTAATGTG	60.814	63.158	0.00	0.00	0.00	3.21
338	339	1.079405	CGACGCCTGGGTAATGTGT	60.079	57.895	0.00	0.00	0.00	3.72
339	340	1.082117	CGACGCCTGGGTAATGTGTC	61.082	60.000	0.00	0.00	36.44	3.67
340	341	0.036765	GACGCCTGGGTAATGTGTCA	60.037	55.000	0.00	0.00	38.90	3.58
341	342	0.398696	ACGCCTGGGTAATGTGTCAA	59.601	50.000	0.00	0.00	0.00	3.18
342	343	1.004277	ACGCCTGGGTAATGTGTCAAT	59.996	47.619	0.00	0.00	0.00	2.57
343	344	1.401552	CGCCTGGGTAATGTGTCAATG	59.598	52.381	0.00	0.00	0.00	2.82
344	345	1.750778	GCCTGGGTAATGTGTCAATGG	59.249	52.381	0.00	0.00	0.00	3.16
345	346	2.883888	GCCTGGGTAATGTGTCAATGGT	60.884	50.000	0.00	0.00	0.00	3.55
346	347	3.430453	CCTGGGTAATGTGTCAATGGTT	58.570	45.455	0.00	0.00	0.00	3.67
347	348	3.193267	CCTGGGTAATGTGTCAATGGTTG	59.807	47.826	0.00	0.00	0.00	3.77
348	349	4.078537	CTGGGTAATGTGTCAATGGTTGA	58.921	43.478	0.00	0.00	37.33	3.18
349	350	4.671831	TGGGTAATGTGTCAATGGTTGAT	58.328	39.130	0.00	0.00	42.47	2.57
350	351	4.462132	TGGGTAATGTGTCAATGGTTGATG	59.538	41.667	0.00	0.00	42.47	3.07
351	352	4.704540	GGGTAATGTGTCAATGGTTGATGA	59.295	41.667	0.00	0.00	42.47	2.92
352	353	5.184864	GGGTAATGTGTCAATGGTTGATGAA	59.815	40.000	0.00	0.00	42.47	2.57
353	354	6.092748	GGTAATGTGTCAATGGTTGATGAAC	58.907	40.000	0.00	0.00	42.47	3.18
354	355	6.071952	GGTAATGTGTCAATGGTTGATGAACT	60.072	38.462	0.00	0.00	42.47	3.01
355	356	6.409524	AATGTGTCAATGGTTGATGAACTT	57.590	33.333	0.00	0.00	42.47	2.66
356	357	7.523293	AATGTGTCAATGGTTGATGAACTTA	57.477	32.000	0.00	0.00	42.47	2.24
357	358	6.312399	TGTGTCAATGGTTGATGAACTTAC	57.688	37.500	0.00	0.00	42.47	2.34
358	359	6.061441	TGTGTCAATGGTTGATGAACTTACT	58.939	36.000	0.00	0.00	42.47	2.24
359	360	6.017192	TGTGTCAATGGTTGATGAACTTACTG	60.017	38.462	0.00	0.00	42.47	2.74
360	361	6.204688	GTGTCAATGGTTGATGAACTTACTGA	59.795	38.462	0.00	0.00	42.47	3.41
361	362	6.942005	TGTCAATGGTTGATGAACTTACTGAT	59.058	34.615	0.00	0.00	42.47	2.90
362	363	7.094677	TGTCAATGGTTGATGAACTTACTGATG	60.095	37.037	0.00	0.00	42.47	3.07
363	364	7.119699	GTCAATGGTTGATGAACTTACTGATGA	59.880	37.037	0.00	0.00	42.47	2.92
364	365	7.665145	TCAATGGTTGATGAACTTACTGATGAA	59.335	33.333	0.00	0.00	34.08	2.57
365	366	7.621428	ATGGTTGATGAACTTACTGATGAAG	57.379	36.000	0.00	0.00	32.15	3.02
366	367	6.533730	TGGTTGATGAACTTACTGATGAAGT	58.466	36.000	0.00	0.00	38.81	3.01
367	368	6.427853	TGGTTGATGAACTTACTGATGAAGTG	59.572	38.462	0.00	0.00	37.22	3.16
368	369	6.650807	GGTTGATGAACTTACTGATGAAGTGA	59.349	38.462	0.00	0.00	37.22	3.41
369	370	7.335422	GGTTGATGAACTTACTGATGAAGTGAT	59.665	37.037	0.00	0.00	37.22	3.06
370	371	8.386606	GTTGATGAACTTACTGATGAAGTGATC	58.613	37.037	0.00	0.00	40.26	2.92
371	372	6.753744	TGATGAACTTACTGATGAAGTGATCG	59.246	38.462	0.00	0.00	40.26	3.69
372	373	6.267496	TGAACTTACTGATGAAGTGATCGA	57.733	37.500	0.00	0.00	40.26	3.59
373	374	6.867550	TGAACTTACTGATGAAGTGATCGAT	58.132	36.000	0.00	0.00	40.26	3.59
374	375	6.753744	TGAACTTACTGATGAAGTGATCGATG	59.246	38.462	0.54	0.00	40.26	3.84
375	376	5.595885	ACTTACTGATGAAGTGATCGATGG	58.404	41.667	0.54	0.00	40.26	3.51
376	377	5.360999	ACTTACTGATGAAGTGATCGATGGA	59.639	40.000	0.54	0.00	40.26	3.41
377	378	4.952071	ACTGATGAAGTGATCGATGGAT	57.048	40.909	0.54	0.00	37.88	3.41
378	379	4.629092	ACTGATGAAGTGATCGATGGATG	58.371	43.478	0.54	0.00	37.88	3.51
379	380	3.396560	TGATGAAGTGATCGATGGATGC	58.603	45.455	0.54	0.00	31.51	3.91
380	381	2.985957	TGAAGTGATCGATGGATGCA	57.014	45.000	0.54	0.00	31.51	3.96
381	382	2.554142	TGAAGTGATCGATGGATGCAC	58.446	47.619	0.54	4.16	34.08	4.57
382	383	2.169144	TGAAGTGATCGATGGATGCACT	59.831	45.455	0.54	6.77	40.02	4.40
383	384	2.235845	AGTGATCGATGGATGCACTG	57.764	50.000	14.02	0.00	38.47	3.66
384	385	0.585357	GTGATCGATGGATGCACTGC	59.415	55.000	0.54	0.00	32.60	4.40
385	386	0.178533	TGATCGATGGATGCACTGCA	59.821	50.000	0.54	6.09	44.86	4.41
386	387	0.585357	GATCGATGGATGCACTGCAC	59.415	55.000	5.67	0.52	43.04	4.57
387	388	0.179702	ATCGATGGATGCACTGCACT	59.820	50.000	5.67	0.00	43.04	4.40
388	389	0.741927	TCGATGGATGCACTGCACTG	60.742	55.000	5.67	0.00	43.04	3.66
389	390	1.432251	GATGGATGCACTGCACTGC	59.568	57.895	5.67	10.99	43.04	4.40
399	400	4.481195	TGCACTGCAGGGTTCTTC	57.519	55.556	19.18	0.00	33.32	2.87
400	401	1.597854	TGCACTGCAGGGTTCTTCG	60.598	57.895	19.18	0.00	33.32	3.79
401	402	1.301716	GCACTGCAGGGTTCTTCGA	60.302	57.895	19.18	0.00	0.00	3.71
402	403	1.294659	GCACTGCAGGGTTCTTCGAG	61.295	60.000	19.18	0.00	0.00	4.04
403	404	0.034059	CACTGCAGGGTTCTTCGAGT	59.966	55.000	19.93	0.00	0.00	4.18
404	405	0.318762	ACTGCAGGGTTCTTCGAGTC	59.681	55.000	19.93	0.00	0.00	3.36
405	406	0.605589	CTGCAGGGTTCTTCGAGTCT	59.394	55.000	5.57	0.00	0.00	3.24
406	407	0.603569	TGCAGGGTTCTTCGAGTCTC	59.396	55.000	0.00	0.00	0.00	3.36
407	408	0.456995	GCAGGGTTCTTCGAGTCTCG	60.457	60.000	16.33	16.33	42.10	4.04
408	409	0.171455	CAGGGTTCTTCGAGTCTCGG	59.829	60.000	21.63	7.26	40.88	4.63
409	410	1.153804	GGGTTCTTCGAGTCTCGGC	60.154	63.158	21.63	7.56	40.88	5.54
410	411	1.514443	GGTTCTTCGAGTCTCGGCG	60.514	63.158	21.63	12.84	40.88	6.46
411	412	1.514443	GTTCTTCGAGTCTCGGCGG	60.514	63.158	21.63	11.92	40.88	6.13
412	413	2.697761	TTCTTCGAGTCTCGGCGGG	61.698	63.158	21.63	2.41	40.88	6.13
413	414	4.856607	CTTCGAGTCTCGGCGGGC	62.857	72.222	21.63	0.00	40.88	6.13
447	448	2.783275	ACGATCGAGACGTCGGTG	59.217	61.111	24.34	4.11	46.80	4.94
448	449	2.648102	CGATCGAGACGTCGGTGC	60.648	66.667	10.26	0.33	46.80	5.01
449	450	2.792599	GATCGAGACGTCGGTGCT	59.207	61.111	10.46	0.00	46.80	4.40
450	451	1.583967	GATCGAGACGTCGGTGCTG	60.584	63.158	10.46	0.00	46.80	4.41
451	452	2.254703	GATCGAGACGTCGGTGCTGT	62.255	60.000	10.46	0.00	46.80	4.40
452	453	2.529005	ATCGAGACGTCGGTGCTGTG	62.529	60.000	10.46	0.00	46.80	3.66
453	454	3.106407	GAGACGTCGGTGCTGTGC	61.106	66.667	10.46	0.00	0.00	4.57
454	455	4.664677	AGACGTCGGTGCTGTGCC	62.665	66.667	10.46	0.00	0.00	5.01
455	456	4.961511	GACGTCGGTGCTGTGCCA	62.962	66.667	0.00	0.00	0.00	4.92
501	502	2.508663	GCCACCGGCTACGTCTTC	60.509	66.667	0.00	0.00	46.69	2.87
502	503	3.003113	GCCACCGGCTACGTCTTCT	62.003	63.158	0.00	0.00	46.69	2.85
503	504	1.153823	CCACCGGCTACGTCTTCTG	60.154	63.158	0.00	0.00	38.78	3.02
504	505	1.153823	CACCGGCTACGTCTTCTGG	60.154	63.158	0.00	0.00	38.78	3.86
505	506	2.348888	ACCGGCTACGTCTTCTGGG	61.349	63.158	0.00	2.54	38.78	4.45
506	507	2.050350	CCGGCTACGTCTTCTGGGA	61.050	63.158	0.00	0.00	38.78	4.37
507	508	1.139095	CGGCTACGTCTTCTGGGAC	59.861	63.158	0.00	0.00	34.81	4.46
513	514	4.600207	GTCTTCTGGGACGGCTTC	57.400	61.111	0.00	0.00	32.53	3.86
514	515	1.079057	GTCTTCTGGGACGGCTTCC	60.079	63.158	0.43	0.43	45.00	3.46
521	522	4.717313	GGACGGCTTCCACCCCAC	62.717	72.222	4.95	0.00	45.10	4.61
522	523	4.717313	GACGGCTTCCACCCCACC	62.717	72.222	0.00	0.00	0.00	4.61
525	526	4.717313	GGCTTCCACCCCACCGAC	62.717	72.222	0.00	0.00	0.00	4.79
539	540	3.118454	CGACGCCGCCAACAAGAT	61.118	61.111	0.00	0.00	0.00	2.40
540	541	2.480555	GACGCCGCCAACAAGATG	59.519	61.111	0.00	0.00	0.00	2.90
541	542	3.667429	GACGCCGCCAACAAGATGC	62.667	63.158	0.00	0.00	0.00	3.91
542	543	3.434319	CGCCGCCAACAAGATGCT	61.434	61.111	0.00	0.00	0.00	3.79
543	544	2.486966	GCCGCCAACAAGATGCTC	59.513	61.111	0.00	0.00	0.00	4.26
544	545	2.787249	CCGCCAACAAGATGCTCG	59.213	61.111	0.00	0.00	0.00	5.03
545	546	2.099062	CGCCAACAAGATGCTCGC	59.901	61.111	0.00	0.00	0.00	5.03
546	547	2.486966	GCCAACAAGATGCTCGCC	59.513	61.111	0.00	0.00	0.00	5.54
547	548	2.787249	CCAACAAGATGCTCGCCG	59.213	61.111	0.00	0.00	0.00	6.46
548	549	2.753966	CCAACAAGATGCTCGCCGG	61.754	63.158	0.00	0.00	0.00	6.13
549	550	3.127533	AACAAGATGCTCGCCGGC	61.128	61.111	19.07	19.07	0.00	6.13
564	565	4.712425	GGCGCTCACCACGTACGT	62.712	66.667	16.72	16.72	0.00	3.57
565	566	2.176546	GCGCTCACCACGTACGTA	59.823	61.111	22.34	4.29	0.00	3.57
566	567	2.148365	GCGCTCACCACGTACGTAC	61.148	63.158	22.34	15.90	0.00	3.67
567	568	1.499056	CGCTCACCACGTACGTACT	59.501	57.895	22.34	5.84	0.00	2.73
568	569	0.721154	CGCTCACCACGTACGTACTA	59.279	55.000	22.34	6.18	0.00	1.82
569	570	1.267235	CGCTCACCACGTACGTACTAG	60.267	57.143	22.34	16.15	0.00	2.57
570	571	1.734465	GCTCACCACGTACGTACTAGT	59.266	52.381	22.34	13.13	0.00	2.57
571	572	2.930040	GCTCACCACGTACGTACTAGTA	59.070	50.000	22.34	0.00	0.00	1.82
572	573	3.000724	GCTCACCACGTACGTACTAGTAG	59.999	52.174	22.34	14.13	0.00	2.57
573	574	4.424626	CTCACCACGTACGTACTAGTAGA	58.575	47.826	22.34	13.62	0.00	2.59
574	575	4.816392	TCACCACGTACGTACTAGTAGAA	58.184	43.478	22.34	3.36	0.00	2.10
575	576	5.234752	TCACCACGTACGTACTAGTAGAAA	58.765	41.667	22.34	0.06	0.00	2.52
576	577	5.120208	TCACCACGTACGTACTAGTAGAAAC	59.880	44.000	22.34	0.96	0.00	2.78
577	578	4.091509	ACCACGTACGTACTAGTAGAAACG	59.908	45.833	22.34	20.71	40.99	3.60
578	579	4.015977	CACGTACGTACTAGTAGAAACGC	58.984	47.826	22.34	11.02	38.87	4.84
579	580	3.062234	ACGTACGTACTAGTAGAAACGCC	59.938	47.826	21.41	14.68	38.87	5.68
580	581	3.062099	CGTACGTACTAGTAGAAACGCCA	59.938	47.826	22.55	12.11	38.87	5.69
581	582	4.260375	CGTACGTACTAGTAGAAACGCCAT	60.260	45.833	22.55	10.85	38.87	4.40
582	583	4.025015	ACGTACTAGTAGAAACGCCATG	57.975	45.455	21.50	0.00	38.87	3.66
583	584	3.181493	ACGTACTAGTAGAAACGCCATGG	60.181	47.826	21.50	7.63	38.87	3.66
584	585	2.981859	ACTAGTAGAAACGCCATGGG	57.018	50.000	15.13	6.26	0.00	4.00
585	586	1.134491	ACTAGTAGAAACGCCATGGGC	60.134	52.381	15.13	4.92	46.75	5.36
595	596	3.059099	CCATGGGCTTTGGCGTTT	58.941	55.556	2.85	0.00	39.81	3.60
596	597	1.374505	CCATGGGCTTTGGCGTTTG	60.375	57.895	2.85	0.00	39.81	2.93
597	598	1.374505	CATGGGCTTTGGCGTTTGG	60.375	57.895	0.00	0.00	39.81	3.28
598	599	2.582493	ATGGGCTTTGGCGTTTGGG	61.582	57.895	0.00	0.00	39.81	4.12
599	600	4.680237	GGGCTTTGGCGTTTGGGC	62.680	66.667	0.00	0.00	39.81	5.36
601	602	4.279043	GCTTTGGCGTTTGGGCGT	62.279	61.111	0.00	0.00	46.04	5.68
602	603	2.910345	GCTTTGGCGTTTGGGCGTA	61.910	57.895	0.00	0.00	46.04	4.42
603	604	1.209127	CTTTGGCGTTTGGGCGTAG	59.791	57.895	0.00	0.00	46.04	3.51
616	617	3.047280	CGTAGCCAGCAACGCCAA	61.047	61.111	0.00	0.00	31.66	4.52
617	618	2.561373	GTAGCCAGCAACGCCAAC	59.439	61.111	0.00	0.00	0.00	3.77
618	619	2.112087	TAGCCAGCAACGCCAACA	59.888	55.556	0.00	0.00	0.00	3.33
619	620	1.303236	TAGCCAGCAACGCCAACAT	60.303	52.632	0.00	0.00	0.00	2.71
620	621	1.585267	TAGCCAGCAACGCCAACATG	61.585	55.000	0.00	0.00	0.00	3.21
621	622	3.041701	CCAGCAACGCCAACATGT	58.958	55.556	0.00	0.00	0.00	3.21
622	623	1.363443	CCAGCAACGCCAACATGTT	59.637	52.632	4.92	4.92	0.00	2.71
623	624	0.249405	CCAGCAACGCCAACATGTTT	60.249	50.000	8.77	0.00	0.00	2.83
624	625	0.854062	CAGCAACGCCAACATGTTTG	59.146	50.000	8.77	6.85	0.00	2.93
625	626	0.249405	AGCAACGCCAACATGTTTGG	60.249	50.000	8.77	14.50	42.37	3.28
632	633	1.496934	CCAACATGTTTGGCGTTTCC	58.503	50.000	8.77	0.00	32.18	3.13
633	634	1.202463	CCAACATGTTTGGCGTTTCCA	60.202	47.619	8.77	0.00	44.85	3.53
634	635	2.547642	CCAACATGTTTGGCGTTTCCAT	60.548	45.455	8.77	0.00	46.04	3.41
635	636	3.305676	CCAACATGTTTGGCGTTTCCATA	60.306	43.478	8.77	0.00	46.04	2.74
636	637	4.493547	CAACATGTTTGGCGTTTCCATAT	58.506	39.130	8.77	0.00	46.04	1.78
637	638	4.108699	ACATGTTTGGCGTTTCCATATG	57.891	40.909	0.00	0.00	46.04	1.78
638	639	3.119173	ACATGTTTGGCGTTTCCATATGG	60.119	43.478	16.25	16.25	46.04	2.74
639	640	2.796557	TGTTTGGCGTTTCCATATGGA	58.203	42.857	20.98	20.98	46.04	3.41
653	654	5.054477	TCCATATGGAACTAAAACGCTAGC	58.946	41.667	22.52	4.06	42.18	3.42
654	655	5.057149	CCATATGGAACTAAAACGCTAGCT	58.943	41.667	17.49	0.00	37.39	3.32
655	656	6.041182	TCCATATGGAACTAAAACGCTAGCTA	59.959	38.462	22.52	0.00	42.18	3.32
656	657	6.366332	CCATATGGAACTAAAACGCTAGCTAG	59.634	42.308	17.49	16.84	37.39	3.42
657	658	3.518590	TGGAACTAAAACGCTAGCTAGC	58.481	45.455	31.88	31.88	45.62	3.42
658	659	3.194968	TGGAACTAAAACGCTAGCTAGCT	59.805	43.478	36.02	23.12	46.85	3.32
659	660	4.182339	GGAACTAAAACGCTAGCTAGCTT	58.818	43.478	36.02	28.07	46.85	3.74
660	661	4.033014	GGAACTAAAACGCTAGCTAGCTTG	59.967	45.833	36.02	26.18	46.85	4.01
661	662	3.522553	ACTAAAACGCTAGCTAGCTTGG	58.477	45.455	36.02	27.79	46.85	3.61
662	663	1.087501	AAAACGCTAGCTAGCTTGGC	58.912	50.000	36.02	24.17	46.85	4.52
663	664	1.084370	AAACGCTAGCTAGCTTGGCG	61.084	55.000	38.45	38.45	46.85	5.69
664	665	2.105128	CGCTAGCTAGCTTGGCGT	59.895	61.111	35.27	14.62	46.85	5.68
665	666	1.519455	CGCTAGCTAGCTTGGCGTT	60.519	57.895	35.27	14.01	46.85	4.84
666	667	1.084370	CGCTAGCTAGCTTGGCGTTT	61.084	55.000	35.27	13.40	46.85	3.60
667	668	0.375106	GCTAGCTAGCTTGGCGTTTG	59.625	55.000	33.71	1.21	45.62	2.93
668	669	1.009829	CTAGCTAGCTTGGCGTTTGG	58.990	55.000	24.88	0.00	34.52	3.28
669	670	0.611200	TAGCTAGCTTGGCGTTTGGA	59.389	50.000	24.88	0.00	34.52	3.53
670	671	0.035056	AGCTAGCTTGGCGTTTGGAT	60.035	50.000	12.68	0.00	34.52	3.41
671	672	0.099436	GCTAGCTTGGCGTTTGGATG	59.901	55.000	7.70	0.00	0.00	3.51
672	673	1.453155	CTAGCTTGGCGTTTGGATGT	58.547	50.000	0.00	0.00	0.00	3.06
673	674	1.131126	CTAGCTTGGCGTTTGGATGTG	59.869	52.381	0.00	0.00	0.00	3.21
674	675	1.080569	GCTTGGCGTTTGGATGTGG	60.081	57.895	0.00	0.00	0.00	4.17
675	676	1.523154	GCTTGGCGTTTGGATGTGGA	61.523	55.000	0.00	0.00	0.00	4.02
676	677	0.523072	CTTGGCGTTTGGATGTGGAG	59.477	55.000	0.00	0.00	0.00	3.86
677	678	1.523154	TTGGCGTTTGGATGTGGAGC	61.523	55.000	0.00	0.00	0.00	4.70
678	679	1.675641	GGCGTTTGGATGTGGAGCT	60.676	57.895	0.00	0.00	0.00	4.09
679	680	1.503542	GCGTTTGGATGTGGAGCTG	59.496	57.895	0.00	0.00	0.00	4.24
680	681	0.955428	GCGTTTGGATGTGGAGCTGA	60.955	55.000	0.00	0.00	0.00	4.26
681	682	1.522668	CGTTTGGATGTGGAGCTGAA	58.477	50.000	0.00	0.00	0.00	3.02
682	683	1.466167	CGTTTGGATGTGGAGCTGAAG	59.534	52.381	0.00	0.00	0.00	3.02
683	684	1.200948	GTTTGGATGTGGAGCTGAAGC	59.799	52.381	0.00	0.00	42.49	3.86
695	696	2.058913	GCTGAAGCGCTAGATACCTC	57.941	55.000	12.05	2.55	0.00	3.85
696	697	1.664588	GCTGAAGCGCTAGATACCTCG	60.665	57.143	12.05	0.49	0.00	4.63
697	698	0.952280	TGAAGCGCTAGATACCTCGG	59.048	55.000	12.05	0.00	0.00	4.63
698	699	0.387494	GAAGCGCTAGATACCTCGGC	60.387	60.000	12.05	0.00	0.00	5.54
699	700	2.126812	GCGCTAGATACCTCGGCG	60.127	66.667	0.00	0.00	44.80	6.46
700	701	2.905807	GCGCTAGATACCTCGGCGT	61.906	63.158	6.85	0.00	44.29	5.68
701	702	1.653115	CGCTAGATACCTCGGCGTT	59.347	57.895	6.85	0.00	40.70	4.84
702	703	0.030369	CGCTAGATACCTCGGCGTTT	59.970	55.000	6.85	0.00	40.70	3.60
703	704	1.535437	CGCTAGATACCTCGGCGTTTT	60.535	52.381	6.85	0.00	40.70	2.43
704	705	2.547826	GCTAGATACCTCGGCGTTTTT	58.452	47.619	6.85	0.00	0.00	1.94
705	706	3.709987	GCTAGATACCTCGGCGTTTTTA	58.290	45.455	6.85	0.00	0.00	1.52
706	707	4.304939	GCTAGATACCTCGGCGTTTTTAT	58.695	43.478	6.85	0.00	0.00	1.40
707	708	5.464168	GCTAGATACCTCGGCGTTTTTATA	58.536	41.667	6.85	0.00	0.00	0.98
708	709	6.098017	GCTAGATACCTCGGCGTTTTTATAT	58.902	40.000	6.85	0.28	0.00	0.86
709	710	6.034683	GCTAGATACCTCGGCGTTTTTATATG	59.965	42.308	6.85	0.00	0.00	1.78
710	711	6.092955	AGATACCTCGGCGTTTTTATATGA	57.907	37.500	6.85	0.00	0.00	2.15
711	712	6.518493	AGATACCTCGGCGTTTTTATATGAA	58.482	36.000	6.85	0.00	0.00	2.57
712	713	6.645415	AGATACCTCGGCGTTTTTATATGAAG	59.355	38.462	6.85	0.00	0.00	3.02
713	714	4.761975	ACCTCGGCGTTTTTATATGAAGA	58.238	39.130	6.85	0.00	0.00	2.87
714	715	5.180271	ACCTCGGCGTTTTTATATGAAGAA	58.820	37.500	6.85	0.00	0.00	2.52
715	716	5.293569	ACCTCGGCGTTTTTATATGAAGAAG	59.706	40.000	6.85	0.00	0.00	2.85
716	717	5.522460	CCTCGGCGTTTTTATATGAAGAAGA	59.478	40.000	6.85	0.00	0.00	2.87
717	718	6.036735	CCTCGGCGTTTTTATATGAAGAAGAA	59.963	38.462	6.85	0.00	0.00	2.52
718	719	7.367159	TCGGCGTTTTTATATGAAGAAGAAA	57.633	32.000	6.85	0.00	0.00	2.52
719	720	7.238571	TCGGCGTTTTTATATGAAGAAGAAAC	58.761	34.615	6.85	0.00	0.00	2.78
720	721	6.192137	CGGCGTTTTTATATGAAGAAGAAACG	59.808	38.462	12.42	12.42	46.01	3.60
722	723	7.419321	CGTTTTTATATGAAGAAGAAACGCC	57.581	36.000	5.68	0.00	40.51	5.68
723	724	7.018826	CGTTTTTATATGAAGAAGAAACGCCA	58.981	34.615	5.68	0.00	40.51	5.69
724	725	7.007099	CGTTTTTATATGAAGAAGAAACGCCAC	59.993	37.037	5.68	0.00	40.51	5.01
725	726	5.712217	TTATATGAAGAAGAAACGCCACG	57.288	39.130	0.00	0.00	0.00	4.94
726	727	1.156736	ATGAAGAAGAAACGCCACGG	58.843	50.000	0.00	0.00	0.00	4.94
727	728	0.179067	TGAAGAAGAAACGCCACGGT	60.179	50.000	0.00	0.00	0.00	4.83
728	729	0.511653	GAAGAAGAAACGCCACGGTC	59.488	55.000	0.00	0.00	0.00	4.79
729	730	0.106149	AAGAAGAAACGCCACGGTCT	59.894	50.000	0.00	0.00	0.00	3.85
730	731	0.963962	AGAAGAAACGCCACGGTCTA	59.036	50.000	0.00	0.00	0.00	2.59
731	732	1.549170	AGAAGAAACGCCACGGTCTAT	59.451	47.619	0.00	0.00	0.00	1.98
732	733	1.659098	GAAGAAACGCCACGGTCTATG	59.341	52.381	0.00	0.00	0.00	2.23
733	734	0.108329	AGAAACGCCACGGTCTATGG	60.108	55.000	0.00	0.00	40.50	2.74
739	740	2.024918	CCACGGTCTATGGCATTGC	58.975	57.895	4.78	0.00	0.00	3.56
740	741	0.464373	CCACGGTCTATGGCATTGCT	60.464	55.000	4.78	0.00	0.00	3.91
741	742	1.202639	CCACGGTCTATGGCATTGCTA	60.203	52.381	4.78	2.16	0.00	3.49
742	743	2.560504	CACGGTCTATGGCATTGCTAA	58.439	47.619	4.78	0.00	0.00	3.09
743	744	2.942376	CACGGTCTATGGCATTGCTAAA	59.058	45.455	4.78	0.00	0.00	1.85
744	745	3.376859	CACGGTCTATGGCATTGCTAAAA	59.623	43.478	4.78	0.00	0.00	1.52
745	746	4.013728	ACGGTCTATGGCATTGCTAAAAA	58.986	39.130	4.78	0.00	0.00	1.94
746	747	4.096382	ACGGTCTATGGCATTGCTAAAAAG	59.904	41.667	4.78	2.69	0.00	2.27
747	748	4.498009	CGGTCTATGGCATTGCTAAAAAGG	60.498	45.833	4.78	0.00	0.00	3.11
748	749	4.402474	GGTCTATGGCATTGCTAAAAAGGT	59.598	41.667	4.78	0.00	0.00	3.50
749	750	5.450550	GGTCTATGGCATTGCTAAAAAGGTC	60.451	44.000	4.78	0.97	0.00	3.85
750	751	5.125417	GTCTATGGCATTGCTAAAAAGGTCA	59.875	40.000	4.78	0.00	29.10	4.02
751	752	4.888326	ATGGCATTGCTAAAAAGGTCAA	57.112	36.364	8.82	0.00	28.26	3.18
752	753	4.679373	TGGCATTGCTAAAAAGGTCAAA	57.321	36.364	8.82	0.00	0.00	2.69
753	754	5.226194	TGGCATTGCTAAAAAGGTCAAAT	57.774	34.783	8.82	0.00	0.00	2.32
754	755	5.237048	TGGCATTGCTAAAAAGGTCAAATC	58.763	37.500	8.82	0.00	0.00	2.17
755	756	4.327087	GGCATTGCTAAAAAGGTCAAATCG	59.673	41.667	8.82	0.00	0.00	3.34
756	757	4.923281	GCATTGCTAAAAAGGTCAAATCGT	59.077	37.500	0.16	0.00	0.00	3.73
757	758	5.164061	GCATTGCTAAAAAGGTCAAATCGTG	60.164	40.000	0.16	0.00	0.00	4.35
758	759	5.759506	TTGCTAAAAAGGTCAAATCGTGA	57.240	34.783	0.00	0.00	0.00	4.35
759	760	5.759506	TGCTAAAAAGGTCAAATCGTGAA	57.240	34.783	0.00	0.00	38.23	3.18
760	761	6.137794	TGCTAAAAAGGTCAAATCGTGAAA	57.862	33.333	0.00	0.00	38.23	2.69
761	762	6.744112	TGCTAAAAAGGTCAAATCGTGAAAT	58.256	32.000	0.00	0.00	38.23	2.17
762	763	7.877003	TGCTAAAAAGGTCAAATCGTGAAATA	58.123	30.769	0.00	0.00	38.23	1.40
763	764	7.806014	TGCTAAAAAGGTCAAATCGTGAAATAC	59.194	33.333	0.00	0.00	38.23	1.89
764	765	8.021396	GCTAAAAAGGTCAAATCGTGAAATACT	58.979	33.333	0.00	0.00	38.23	2.12
765	766	9.893305	CTAAAAAGGTCAAATCGTGAAATACTT	57.107	29.630	0.00	0.00	38.23	2.24
767	768	8.797266	AAAAGGTCAAATCGTGAAATACTTTC	57.203	30.769	0.00	0.00	38.23	2.62
768	769	7.504924	AAGGTCAAATCGTGAAATACTTTCA	57.495	32.000	0.00	0.00	46.68	2.69
786	787	9.825972	ATACTTTCATGTCGAGTTTATTTTGTG	57.174	29.630	0.00	0.00	0.00	3.33
787	788	7.925993	ACTTTCATGTCGAGTTTATTTTGTGA	58.074	30.769	0.00	0.00	0.00	3.58
788	789	7.855904	ACTTTCATGTCGAGTTTATTTTGTGAC	59.144	33.333	0.00	0.00	0.00	3.67
789	790	6.852858	TCATGTCGAGTTTATTTTGTGACA	57.147	33.333	0.00	0.00	38.98	3.58
790	791	7.252965	TCATGTCGAGTTTATTTTGTGACAA	57.747	32.000	0.00	0.00	38.25	3.18
791	792	7.698628	TCATGTCGAGTTTATTTTGTGACAAA	58.301	30.769	6.66	6.66	38.25	2.83
792	793	8.184848	TCATGTCGAGTTTATTTTGTGACAAAA	58.815	29.630	23.72	23.72	38.25	2.44
793	794	8.802856	CATGTCGAGTTTATTTTGTGACAAAAA	58.197	29.630	25.01	12.96	38.25	1.94
794	795	8.918961	TGTCGAGTTTATTTTGTGACAAAAAT	57.081	26.923	25.01	16.12	41.45	1.82
795	796	9.360093	TGTCGAGTTTATTTTGTGACAAAAATT	57.640	25.926	25.01	13.65	39.73	1.82
796	797	9.618410	GTCGAGTTTATTTTGTGACAAAAATTG	57.382	29.630	25.01	13.29	39.73	2.32
797	798	8.324567	TCGAGTTTATTTTGTGACAAAAATTGC	58.675	29.630	25.01	15.92	39.73	3.56
798	799	8.327429	CGAGTTTATTTTGTGACAAAAATTGCT	58.673	29.630	25.01	19.51	39.73	3.91
799	800	9.424659	GAGTTTATTTTGTGACAAAAATTGCTG	57.575	29.630	25.01	0.00	39.73	4.41
800	801	9.160496	AGTTTATTTTGTGACAAAAATTGCTGA	57.840	25.926	25.01	4.86	39.73	4.26
801	802	9.766277	GTTTATTTTGTGACAAAAATTGCTGAA	57.234	25.926	25.01	10.21	39.73	3.02
805	806	8.725212	TTTTGTGACAAAAATTGCTGAAAAAG	57.275	26.923	20.01	0.00	0.00	2.27
806	807	7.432350	TTGTGACAAAAATTGCTGAAAAAGT	57.568	28.000	0.00	0.00	0.00	2.66
807	808	7.059448	TGTGACAAAAATTGCTGAAAAAGTC	57.941	32.000	0.00	0.00	0.00	3.01
808	809	6.648310	TGTGACAAAAATTGCTGAAAAAGTCA	59.352	30.769	0.00	0.00	34.17	3.41
809	810	7.333921	TGTGACAAAAATTGCTGAAAAAGTCAT	59.666	29.630	0.00	0.00	35.07	3.06
810	811	8.816144	GTGACAAAAATTGCTGAAAAAGTCATA	58.184	29.630	0.00	0.00	35.07	2.15
811	812	9.376075	TGACAAAAATTGCTGAAAAAGTCATAA	57.624	25.926	0.00	0.00	35.07	1.90
816	817	7.975866	AATTGCTGAAAAAGTCATAATAGCG	57.024	32.000	0.00	0.00	35.07	4.26
817	818	6.735678	TTGCTGAAAAAGTCATAATAGCGA	57.264	33.333	0.00	0.00	35.07	4.93
818	819	6.925610	TGCTGAAAAAGTCATAATAGCGAT	57.074	33.333	0.00	0.00	35.07	4.58
819	820	7.320443	TGCTGAAAAAGTCATAATAGCGATT	57.680	32.000	0.00	0.00	35.07	3.34
820	821	7.761409	TGCTGAAAAAGTCATAATAGCGATTT	58.239	30.769	0.00	0.00	35.07	2.17
821	822	7.910162	TGCTGAAAAAGTCATAATAGCGATTTC	59.090	33.333	0.00	0.00	35.07	2.17
822	823	7.110765	GCTGAAAAAGTCATAATAGCGATTTCG	59.889	37.037	0.00	0.00	37.82	3.46
823	824	7.406553	TGAAAAAGTCATAATAGCGATTTCGG	58.593	34.615	0.00	0.00	40.23	4.30
824	825	4.992381	AAGTCATAATAGCGATTTCGGC	57.008	40.909	0.00	0.00	40.23	5.54
825	826	3.326747	AGTCATAATAGCGATTTCGGCC	58.673	45.455	0.00	0.00	40.23	6.13
826	827	3.064207	GTCATAATAGCGATTTCGGCCA	58.936	45.455	2.24	0.00	40.23	5.36
827	828	3.123621	GTCATAATAGCGATTTCGGCCAG	59.876	47.826	2.24	0.00	40.23	4.85
828	829	1.508632	TAATAGCGATTTCGGCCAGC	58.491	50.000	2.24	0.00	40.23	4.85
829	830	1.166531	AATAGCGATTTCGGCCAGCC	61.167	55.000	2.24	0.00	40.23	4.85
830	831	3.750373	TAGCGATTTCGGCCAGCCC	62.750	63.158	2.24	0.00	40.23	5.19
864	865	2.047274	GCCCAACAGCTGCGTCTA	60.047	61.111	15.27	0.00	0.00	2.59
865	866	2.391389	GCCCAACAGCTGCGTCTAC	61.391	63.158	15.27	0.00	0.00	2.59
866	867	1.741770	CCCAACAGCTGCGTCTACC	60.742	63.158	15.27	0.00	0.00	3.18
867	868	1.005037	CCAACAGCTGCGTCTACCA	60.005	57.895	15.27	0.00	0.00	3.25
868	869	1.291877	CCAACAGCTGCGTCTACCAC	61.292	60.000	15.27	0.00	0.00	4.16
869	870	1.004918	AACAGCTGCGTCTACCACC	60.005	57.895	15.27	0.00	0.00	4.61
870	871	2.125512	CAGCTGCGTCTACCACCC	60.126	66.667	0.00	0.00	0.00	4.61
871	872	3.391382	AGCTGCGTCTACCACCCC	61.391	66.667	0.00	0.00	0.00	4.95
872	873	4.468689	GCTGCGTCTACCACCCCC	62.469	72.222	0.00	0.00	0.00	5.40
1005	1025	1.406065	CCTCTCGCTCCCACATGGAT	61.406	60.000	0.00	0.00	44.07	3.41
1008	1028	1.688884	TCGCTCCCACATGGATCCA	60.689	57.895	18.88	18.88	44.07	3.41
1022	1042	1.340600	GGATCCAATCAAACCCACGGA	60.341	52.381	6.95	0.00	0.00	4.69
1031	3759	0.105913	AAACCCACGGACACCCAAAT	60.106	50.000	0.00	0.00	0.00	2.32
1042	3770	2.086869	ACACCCAAATGAGCAAGATCG	58.913	47.619	0.00	0.00	0.00	3.69
1135	4075	2.443016	AGAAGATCCTCGGCGGCT	60.443	61.111	7.21	0.00	0.00	5.52
1150	4090	2.505982	GCTTCAGCCCGCTGGATA	59.494	61.111	16.33	2.50	43.75	2.59
1268	4220	2.359975	CCCGTTCTGGTTCCAGCC	60.360	66.667	13.44	6.21	35.15	4.85
1560	4530	2.695646	GCCAACGCGATCTTCGAC	59.304	61.111	15.93	0.00	43.74	4.20
1755	4752	1.968540	GTGGCGCCTGAAGAAGCTT	60.969	57.895	29.70	0.00	0.00	3.74
2088	5093	4.767255	CGCTCCTGGGTCACCTGC	62.767	72.222	0.00	0.00	37.76	4.85
2183	5188	3.322466	ACGCTGGTTCCTCCCTGG	61.322	66.667	0.00	0.00	34.77	4.45
2246	5259	3.418047	TCGGGAGAAAGGACAAAAATCC	58.582	45.455	0.00	0.00	35.71	3.01
2379	5429	5.801947	GCAATTGTGCGAAATCAAGATACTT	59.198	36.000	7.40	0.00	41.93	2.24
2384	5434	9.764363	ATTGTGCGAAATCAAGATACTTCTATA	57.236	29.630	0.00	0.00	0.00	1.31
2403	5453	9.784531	CTTCTATAAATCCTTTGGCTCTGATTA	57.215	33.333	0.00	0.00	0.00	1.75
2450	5658	5.877564	GCTTATAAATCCCTGAGATGCTACC	59.122	44.000	0.00	0.00	34.56	3.18
2498	5806	9.388506	TCTAGGATCTGAATCTGAAAATTTGTC	57.611	33.333	0.00	0.00	32.12	3.18
2549	5857	6.899393	TGAGGCTGTTTGATTTAGTTGATT	57.101	33.333	0.00	0.00	0.00	2.57
2568	5876	9.153721	AGTTGATTTATTATTGCATGTTGTTGG	57.846	29.630	0.00	0.00	0.00	3.77
2569	5877	8.934825	GTTGATTTATTATTGCATGTTGTTGGT	58.065	29.630	0.00	0.00	0.00	3.67
2571	5879	9.800433	TGATTTATTATTGCATGTTGTTGGTAG	57.200	29.630	0.00	0.00	0.00	3.18
2575	5883	4.989279	ATTGCATGTTGTTGGTAGATCC	57.011	40.909	0.00	0.00	0.00	3.36
2578	5886	4.343231	TGCATGTTGTTGGTAGATCCATT	58.657	39.130	0.00	0.00	46.60	3.16
2676	5984	1.331138	CTCTCTCGGTCCGTATGTGAC	59.669	57.143	11.88	0.00	0.00	3.67
2705	6408	2.224606	CAGGGCGATTATGTTGCATCT	58.775	47.619	0.00	0.00	39.13	2.90
2707	6410	2.158769	AGGGCGATTATGTTGCATCTCA	60.159	45.455	0.00	0.00	39.13	3.27
2709	6412	3.304257	GGGCGATTATGTTGCATCTCAAG	60.304	47.826	0.00	0.00	39.13	3.02
2710	6413	3.294943	GCGATTATGTTGCATCTCAAGC	58.705	45.455	0.00	0.00	37.18	4.01
2712	6415	4.524749	CGATTATGTTGCATCTCAAGCTG	58.475	43.478	0.00	0.00	34.91	4.24
2713	6416	4.034858	CGATTATGTTGCATCTCAAGCTGT	59.965	41.667	0.00	0.00	34.91	4.40
2714	6417	5.448225	CGATTATGTTGCATCTCAAGCTGTT	60.448	40.000	0.00	0.00	34.91	3.16
2715	6418	5.710513	TTATGTTGCATCTCAAGCTGTTT	57.289	34.783	0.00	0.00	34.91	2.83
2717	6420	3.216800	TGTTGCATCTCAAGCTGTTTCT	58.783	40.909	0.00	0.00	34.91	2.52
2721	6424	4.898320	TGCATCTCAAGCTGTTTCTAAGA	58.102	39.130	0.00	0.00	0.00	2.10
2722	6425	5.494724	TGCATCTCAAGCTGTTTCTAAGAT	58.505	37.500	0.00	0.00	0.00	2.40
2723	6426	5.583854	TGCATCTCAAGCTGTTTCTAAGATC	59.416	40.000	0.00	0.00	0.00	2.75
2724	6427	5.007528	GCATCTCAAGCTGTTTCTAAGATCC	59.992	44.000	0.00	0.00	0.00	3.36
2725	6428	5.745312	TCTCAAGCTGTTTCTAAGATCCA	57.255	39.130	0.00	0.00	0.00	3.41
2726	6429	6.305272	TCTCAAGCTGTTTCTAAGATCCAT	57.695	37.500	0.00	0.00	0.00	3.41
2727	6430	6.715280	TCTCAAGCTGTTTCTAAGATCCATT	58.285	36.000	0.00	0.00	0.00	3.16
2728	6431	7.851228	TCTCAAGCTGTTTCTAAGATCCATTA	58.149	34.615	0.00	0.00	0.00	1.90
2729	6432	7.766278	TCTCAAGCTGTTTCTAAGATCCATTAC	59.234	37.037	0.00	0.00	0.00	1.89
2730	6433	7.624549	TCAAGCTGTTTCTAAGATCCATTACT	58.375	34.615	0.00	0.00	0.00	2.24
2731	6434	8.103305	TCAAGCTGTTTCTAAGATCCATTACTT	58.897	33.333	0.00	0.00	0.00	2.24
2732	6435	8.734386	CAAGCTGTTTCTAAGATCCATTACTTT	58.266	33.333	0.00	0.00	0.00	2.66
2811	6522	4.377897	ACTTGGTCTTGCAGTGTACTTAC	58.622	43.478	0.00	0.00	0.00	2.34
2814	6525	5.731957	TGGTCTTGCAGTGTACTTACATA	57.268	39.130	0.00	0.00	38.63	2.29
2815	6526	5.475719	TGGTCTTGCAGTGTACTTACATAC	58.524	41.667	0.00	0.00	38.63	2.39
2816	6527	5.011227	TGGTCTTGCAGTGTACTTACATACA	59.989	40.000	0.00	0.00	38.63	2.29
2817	6528	5.577164	GGTCTTGCAGTGTACTTACATACAG	59.423	44.000	0.00	0.00	38.63	2.74
2818	6529	6.157211	GTCTTGCAGTGTACTTACATACAGT	58.843	40.000	0.00	0.00	38.93	3.55
2850	6564	2.176546	CACAAAGGTGCATCGGCG	59.823	61.111	0.00	0.00	45.35	6.46
2933	8116	3.555324	TGCGTTGCTGGGAGGTCA	61.555	61.111	0.00	0.00	0.00	4.02
2950	8133	2.555757	GGTCAAAACAGCTTGAGATGCT	59.444	45.455	0.00	0.00	42.06	3.79
2992	8175	3.924507	CCCTGAAATTGGAGGGCG	58.075	61.111	8.75	0.00	42.74	6.13
2993	8176	1.000896	CCCTGAAATTGGAGGGCGT	60.001	57.895	8.75	0.00	42.74	5.68
2994	8177	0.611896	CCCTGAAATTGGAGGGCGTT	60.612	55.000	8.75	0.00	42.74	4.84
2995	8178	1.256812	CCTGAAATTGGAGGGCGTTT	58.743	50.000	0.00	0.00	0.00	3.60
2996	8179	2.442413	CCTGAAATTGGAGGGCGTTTA	58.558	47.619	0.00	0.00	0.00	2.01
3022	8205	6.509418	TTTTTACAGAAGACAGCAACACTT	57.491	33.333	0.00	0.00	0.00	3.16
3036	8221	0.661020	ACACTTGTTCCCTTTTCGCG	59.339	50.000	0.00	0.00	0.00	5.87
3053	8238	3.719924	TCGCGAAAAGGAGTAACAGAAA	58.280	40.909	6.20	0.00	0.00	2.52
3054	8239	4.312443	TCGCGAAAAGGAGTAACAGAAAT	58.688	39.130	6.20	0.00	0.00	2.17
3055	8240	4.151689	TCGCGAAAAGGAGTAACAGAAATG	59.848	41.667	6.20	0.00	0.00	2.32
3059	8244	6.695713	GCGAAAAGGAGTAACAGAAATGTTTT	59.304	34.615	0.00	0.00	33.59	2.43
3062	8282	9.237846	GAAAAGGAGTAACAGAAATGTTTTCAG	57.762	33.333	0.00	0.00	33.55	3.02
3067	8287	7.308830	GGAGTAACAGAAATGTTTTCAGCTGAT	60.309	37.037	19.04	0.00	34.14	2.90
3071	8291	7.516198	ACAGAAATGTTTTCAGCTGATAACT	57.484	32.000	34.69	23.02	37.06	2.24
3148	8420	1.110442	CCGTCAGAAGAGCAGGAGAT	58.890	55.000	0.00	0.00	0.00	2.75
3149	8421	1.480137	CCGTCAGAAGAGCAGGAGATT	59.520	52.381	0.00	0.00	0.00	2.40
3150	8422	2.093764	CCGTCAGAAGAGCAGGAGATTT	60.094	50.000	0.00	0.00	0.00	2.17
3182	8454	5.751990	CGTGACACTAGTGTTACTCCTTTTT	59.248	40.000	34.53	10.80	44.72	1.94
3185	8457	8.546244	GTGACACTAGTGTTACTCCTTTTTAAC	58.454	37.037	32.52	16.03	45.05	2.01
3208	8482	8.873215	AACAGTACATAAGATCGTTTCTATGG	57.127	34.615	0.00	0.00	33.05	2.74
3211	8485	7.600375	CAGTACATAAGATCGTTTCTATGGCAT	59.400	37.037	4.88	4.88	33.05	4.40
3272	8570	1.155042	GTTGAGCTCCTCTTGCAGTG	58.845	55.000	12.15	0.00	0.00	3.66
3390	8713	6.120507	AGAAGAAATTCCTACTTCAGCTGT	57.879	37.500	14.67	0.00	41.37	4.40
3397	8720	3.365472	TCCTACTTCAGCTGTGCTATCA	58.635	45.455	14.67	0.00	36.40	2.15
3398	8721	3.382865	TCCTACTTCAGCTGTGCTATCAG	59.617	47.826	14.67	3.37	36.40	2.90
3399	8722	3.131933	CCTACTTCAGCTGTGCTATCAGT	59.868	47.826	14.67	7.96	36.40	3.41
3401	8724	3.332919	ACTTCAGCTGTGCTATCAGTTG	58.667	45.455	14.67	11.96	44.19	3.16
3403	8726	3.900966	TCAGCTGTGCTATCAGTTGAT	57.099	42.857	14.67	0.00	45.58	2.57

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	1.527611	CCACCGCTCATGCATGGAT	60.528	57.895	25.97	5.17	43.83	3.41
1	2	2.124612	CCACCGCTCATGCATGGA	60.125	61.111	25.97	12.05	43.83	3.41
4	5	2.703798	GCAACCACCGCTCATGCAT	61.704	57.895	0.00	0.00	39.64	3.96
5	6	3.364441	GCAACCACCGCTCATGCA	61.364	61.111	0.00	0.00	39.64	3.96
6	7	2.216750	AATGCAACCACCGCTCATGC	62.217	55.000	0.00	0.00	37.52	4.06
7	8	0.457166	CAATGCAACCACCGCTCATG	60.457	55.000	0.00	0.00	0.00	3.07
8	9	1.885157	CAATGCAACCACCGCTCAT	59.115	52.632	0.00	0.00	0.00	2.90
9	10	2.918345	GCAATGCAACCACCGCTCA	61.918	57.895	0.00	0.00	0.00	4.26
10	11	2.126346	GCAATGCAACCACCGCTC	60.126	61.111	0.00	0.00	0.00	5.03
11	12	1.818959	AATGCAATGCAACCACCGCT	61.819	50.000	13.45	0.00	43.62	5.52
12	13	0.950071	AAATGCAATGCAACCACCGC	60.950	50.000	13.45	0.00	43.62	5.68
13	14	0.791422	CAAATGCAATGCAACCACCG	59.209	50.000	13.45	0.00	43.62	4.94
14	15	0.518195	GCAAATGCAATGCAACCACC	59.482	50.000	13.45	0.00	43.62	4.61
33	34	1.448365	TACAGCCTCTGCACGCATG	60.448	57.895	0.00	0.00	41.13	4.06
34	35	1.448540	GTACAGCCTCTGCACGCAT	60.449	57.895	0.00	0.00	41.13	4.73
35	36	2.048222	GTACAGCCTCTGCACGCA	60.048	61.111	0.00	0.00	41.13	5.24
36	37	3.181967	CGTACAGCCTCTGCACGC	61.182	66.667	6.65	0.00	42.82	5.34
37	38	2.507102	CCGTACAGCCTCTGCACG	60.507	66.667	11.43	11.43	46.80	5.34
38	39	2.125512	CCCGTACAGCCTCTGCAC	60.126	66.667	0.00	0.00	41.13	4.57
39	40	4.082523	GCCCGTACAGCCTCTGCA	62.083	66.667	0.00	0.00	41.13	4.41
40	41	2.804828	AAAGCCCGTACAGCCTCTGC	62.805	60.000	1.40	0.00	34.37	4.26
41	42	0.321653	AAAAGCCCGTACAGCCTCTG	60.322	55.000	1.40	0.00	37.52	3.35
42	43	0.400594	AAAAAGCCCGTACAGCCTCT	59.599	50.000	1.40	0.00	0.00	3.69
43	44	2.942641	AAAAAGCCCGTACAGCCTC	58.057	52.632	1.40	0.00	0.00	4.70
61	62	7.650104	CCGTACAGCCTTATTTTCAAAGAAAAA	59.350	33.333	8.75	0.00	32.99	1.94
62	63	7.142680	CCGTACAGCCTTATTTTCAAAGAAAA	58.857	34.615	7.30	7.30	0.00	2.29
63	64	6.294286	CCCGTACAGCCTTATTTTCAAAGAAA	60.294	38.462	0.00	0.00	0.00	2.52
64	65	5.182380	CCCGTACAGCCTTATTTTCAAAGAA	59.818	40.000	0.00	0.00	0.00	2.52
65	66	4.698304	CCCGTACAGCCTTATTTTCAAAGA	59.302	41.667	0.00	0.00	0.00	2.52
66	67	4.674362	GCCCGTACAGCCTTATTTTCAAAG	60.674	45.833	0.00	0.00	0.00	2.77
67	68	3.191791	GCCCGTACAGCCTTATTTTCAAA	59.808	43.478	0.00	0.00	0.00	2.69
68	69	2.750712	GCCCGTACAGCCTTATTTTCAA	59.249	45.455	0.00	0.00	0.00	2.69
69	70	2.026636	AGCCCGTACAGCCTTATTTTCA	60.027	45.455	1.40	0.00	0.00	2.69
70	71	2.640184	AGCCCGTACAGCCTTATTTTC	58.360	47.619	1.40	0.00	0.00	2.29
71	72	2.801077	AGCCCGTACAGCCTTATTTT	57.199	45.000	1.40	0.00	0.00	1.82
72	73	2.104281	CCTAGCCCGTACAGCCTTATTT	59.896	50.000	1.40	0.00	0.00	1.40
73	74	1.692519	CCTAGCCCGTACAGCCTTATT	59.307	52.381	1.40	0.00	0.00	1.40
74	75	1.133262	TCCTAGCCCGTACAGCCTTAT	60.133	52.381	1.40	0.00	0.00	1.73
75	76	0.259647	TCCTAGCCCGTACAGCCTTA	59.740	55.000	1.40	0.00	0.00	2.69
76	77	1.001248	TCCTAGCCCGTACAGCCTT	59.999	57.895	1.40	0.00	0.00	4.35
77	78	1.455959	CTCCTAGCCCGTACAGCCT	60.456	63.158	1.40	0.00	0.00	4.58
78	79	1.757340	ACTCCTAGCCCGTACAGCC	60.757	63.158	1.40	0.00	0.00	4.85
79	80	1.437986	CACTCCTAGCCCGTACAGC	59.562	63.158	0.00	0.00	0.00	4.40
80	81	1.437986	GCACTCCTAGCCCGTACAG	59.562	63.158	0.00	0.00	0.00	2.74
81	82	2.412323	CGCACTCCTAGCCCGTACA	61.412	63.158	0.00	0.00	0.00	2.90
82	83	2.412112	CGCACTCCTAGCCCGTAC	59.588	66.667	0.00	0.00	0.00	3.67
83	84	2.831742	CCGCACTCCTAGCCCGTA	60.832	66.667	0.00	0.00	0.00	4.02
88	89	3.850095	GATCCGCCGCACTCCTAGC	62.850	68.421	0.00	0.00	0.00	3.42
89	90	2.336809	GATCCGCCGCACTCCTAG	59.663	66.667	0.00	0.00	0.00	3.02
90	91	3.592814	CGATCCGCCGCACTCCTA	61.593	66.667	0.00	0.00	0.00	2.94
132	133	2.126031	GAAGAGGGTGACGGACGC	60.126	66.667	0.00	0.00	37.80	5.19
133	134	2.178521	CGAAGAGGGTGACGGACG	59.821	66.667	0.00	0.00	0.00	4.79
134	135	2.572284	CCGAAGAGGGTGACGGAC	59.428	66.667	0.00	0.00	46.94	4.79
135	136	3.379445	GCCGAAGAGGGTGACGGA	61.379	66.667	0.00	0.00	46.94	4.69
136	137	4.796231	CGCCGAAGAGGGTGACGG	62.796	72.222	0.00	0.00	46.74	4.79
137	138	4.796231	CCGCCGAAGAGGGTGACG	62.796	72.222	0.00	0.00	40.04	4.35
170	171	2.432456	TTGAGCCGCTACACGCAG	60.432	61.111	0.00	0.00	41.76	5.18
171	172	2.736995	GTTGAGCCGCTACACGCA	60.737	61.111	0.00	0.00	41.76	5.24
172	173	1.635663	ATTGTTGAGCCGCTACACGC	61.636	55.000	0.00	0.00	41.76	5.34
173	174	0.095245	CATTGTTGAGCCGCTACACG	59.905	55.000	0.00	0.00	43.15	4.49
174	175	1.128692	GTCATTGTTGAGCCGCTACAC	59.871	52.381	0.00	0.00	32.03	2.90
175	176	1.001974	AGTCATTGTTGAGCCGCTACA	59.998	47.619	0.00	0.00	30.85	2.74
176	177	1.661112	GAGTCATTGTTGAGCCGCTAC	59.339	52.381	0.00	0.00	30.85	3.58
177	178	1.405526	GGAGTCATTGTTGAGCCGCTA	60.406	52.381	0.00	0.00	30.85	4.26
178	179	0.674895	GGAGTCATTGTTGAGCCGCT	60.675	55.000	0.00	0.00	30.85	5.52
179	180	1.648467	GGGAGTCATTGTTGAGCCGC	61.648	60.000	0.00	0.00	31.33	6.53
180	181	0.036010	AGGGAGTCATTGTTGAGCCG	60.036	55.000	0.00	0.00	31.33	5.52
181	182	1.003580	TGAGGGAGTCATTGTTGAGCC	59.996	52.381	0.00	0.00	30.85	4.70
182	183	2.079925	GTGAGGGAGTCATTGTTGAGC	58.920	52.381	0.00	0.00	37.56	4.26
183	184	2.304180	AGGTGAGGGAGTCATTGTTGAG	59.696	50.000	0.00	0.00	37.56	3.02
184	185	2.338809	AGGTGAGGGAGTCATTGTTGA	58.661	47.619	0.00	0.00	37.56	3.18
185	186	2.867109	AGGTGAGGGAGTCATTGTTG	57.133	50.000	0.00	0.00	37.56	3.33
186	187	2.711009	TGAAGGTGAGGGAGTCATTGTT	59.289	45.455	0.00	0.00	37.56	2.83
187	188	2.338809	TGAAGGTGAGGGAGTCATTGT	58.661	47.619	0.00	0.00	37.56	2.71
188	189	3.077359	GTTGAAGGTGAGGGAGTCATTG	58.923	50.000	0.00	0.00	37.56	2.82
189	190	2.711009	TGTTGAAGGTGAGGGAGTCATT	59.289	45.455	0.00	0.00	37.56	2.57
190	191	2.039084	GTGTTGAAGGTGAGGGAGTCAT	59.961	50.000	0.00	0.00	37.56	3.06
191	192	1.416401	GTGTTGAAGGTGAGGGAGTCA	59.584	52.381	0.00	0.00	0.00	3.41
192	193	1.270893	GGTGTTGAAGGTGAGGGAGTC	60.271	57.143	0.00	0.00	0.00	3.36
193	194	0.765510	GGTGTTGAAGGTGAGGGAGT	59.234	55.000	0.00	0.00	0.00	3.85
194	195	0.764890	TGGTGTTGAAGGTGAGGGAG	59.235	55.000	0.00	0.00	0.00	4.30
195	196	1.142870	CTTGGTGTTGAAGGTGAGGGA	59.857	52.381	0.00	0.00	0.00	4.20
196	197	1.609208	CTTGGTGTTGAAGGTGAGGG	58.391	55.000	0.00	0.00	0.00	4.30
197	198	0.954452	GCTTGGTGTTGAAGGTGAGG	59.046	55.000	0.00	0.00	0.00	3.86
198	199	1.972872	AGCTTGGTGTTGAAGGTGAG	58.027	50.000	0.00	0.00	30.07	3.51
200	201	0.031178	GCAGCTTGGTGTTGAAGGTG	59.969	55.000	0.00	0.00	46.85	4.00
201	202	0.395586	TGCAGCTTGGTGTTGAAGGT	60.396	50.000	0.00	0.00	0.00	3.50
202	203	0.313043	CTGCAGCTTGGTGTTGAAGG	59.687	55.000	0.00	0.00	29.84	3.46
203	204	0.313043	CCTGCAGCTTGGTGTTGAAG	59.687	55.000	8.66	0.00	32.89	3.02
204	205	1.737355	GCCTGCAGCTTGGTGTTGAA	61.737	55.000	8.66	0.00	38.99	2.69
205	206	2.195567	GCCTGCAGCTTGGTGTTGA	61.196	57.895	8.66	0.00	38.99	3.18
206	207	2.337532	GCCTGCAGCTTGGTGTTG	59.662	61.111	8.66	0.00	38.99	3.33
207	208	3.289834	CGCCTGCAGCTTGGTGTT	61.290	61.111	8.66	0.00	40.39	3.32
228	229	4.735132	CTTCTTGGCCGCGTCCGA	62.735	66.667	4.92	0.00	36.29	4.55
237	238	2.751436	TCCATGGCGCTTCTTGGC	60.751	61.111	6.96	0.00	33.49	4.52
238	239	1.033746	ATGTCCATGGCGCTTCTTGG	61.034	55.000	6.96	9.78	34.41	3.61
239	240	0.379669	GATGTCCATGGCGCTTCTTG	59.620	55.000	6.96	0.00	0.00	3.02
240	241	0.254178	AGATGTCCATGGCGCTTCTT	59.746	50.000	6.96	0.00	0.00	2.52
241	242	1.123077	TAGATGTCCATGGCGCTTCT	58.877	50.000	20.16	20.16	0.00	2.85
242	243	1.221414	GTAGATGTCCATGGCGCTTC	58.779	55.000	6.96	9.97	0.00	3.86
243	244	0.530650	CGTAGATGTCCATGGCGCTT	60.531	55.000	6.96	0.34	0.00	4.68
244	245	1.068083	CGTAGATGTCCATGGCGCT	59.932	57.895	6.96	6.72	0.00	5.92
245	246	1.067416	TCGTAGATGTCCATGGCGC	59.933	57.895	6.96	0.00	0.00	6.53
246	247	0.597637	GGTCGTAGATGTCCATGGCG	60.598	60.000	6.96	2.77	40.67	5.69
247	248	0.249911	GGGTCGTAGATGTCCATGGC	60.250	60.000	6.96	2.72	40.67	4.40
248	249	0.032130	CGGGTCGTAGATGTCCATGG	59.968	60.000	4.97	4.97	40.67	3.66
249	250	0.597637	GCGGGTCGTAGATGTCCATG	60.598	60.000	0.00	0.00	40.67	3.66
250	251	1.040893	TGCGGGTCGTAGATGTCCAT	61.041	55.000	0.00	0.00	40.67	3.41
251	252	1.663379	CTGCGGGTCGTAGATGTCCA	61.663	60.000	0.00	0.00	41.80	4.02
252	253	1.065928	CTGCGGGTCGTAGATGTCC	59.934	63.158	0.00	0.00	41.80	4.02
253	254	1.589196	GCTGCGGGTCGTAGATGTC	60.589	63.158	9.40	0.00	41.80	3.06
254	255	2.005960	GAGCTGCGGGTCGTAGATGT	62.006	60.000	9.33	0.00	38.41	3.06
255	256	1.299468	GAGCTGCGGGTCGTAGATG	60.299	63.158	9.33	0.00	38.41	2.90
256	257	1.320344	TTGAGCTGCGGGTCGTAGAT	61.320	55.000	19.30	2.69	41.23	1.98
257	258	1.974875	TTGAGCTGCGGGTCGTAGA	60.975	57.895	19.30	0.00	41.80	2.59
258	259	1.805945	GTTGAGCTGCGGGTCGTAG	60.806	63.158	19.30	1.25	42.30	3.51
259	260	2.260434	GTTGAGCTGCGGGTCGTA	59.740	61.111	19.30	7.68	42.30	3.43
260	261	4.681978	GGTTGAGCTGCGGGTCGT	62.682	66.667	19.30	0.00	42.30	4.34
261	262	4.379243	AGGTTGAGCTGCGGGTCG	62.379	66.667	19.30	0.00	42.30	4.79
262	263	2.435059	GAGGTTGAGCTGCGGGTC	60.435	66.667	17.93	17.93	40.08	4.46
263	264	4.379243	CGAGGTTGAGCTGCGGGT	62.379	66.667	0.00	0.00	0.00	5.28
264	265	4.379243	ACGAGGTTGAGCTGCGGG	62.379	66.667	0.00	0.00	0.00	6.13
265	266	2.811317	GACGAGGTTGAGCTGCGG	60.811	66.667	0.00	0.00	0.00	5.69
266	267	3.175240	CGACGAGGTTGAGCTGCG	61.175	66.667	0.00	0.00	0.00	5.18
267	268	3.482783	GCGACGAGGTTGAGCTGC	61.483	66.667	0.00	0.00	0.00	5.25
268	269	2.811317	GGCGACGAGGTTGAGCTG	60.811	66.667	0.00	0.00	0.00	4.24
280	281	3.188786	GCTCATGGTGTCGGCGAC	61.189	66.667	31.68	31.68	0.00	5.19
286	287	3.365291	TACCGGCGCTCATGGTGTC	62.365	63.158	19.40	0.00	37.20	3.67
287	288	3.387091	TACCGGCGCTCATGGTGT	61.387	61.111	19.40	0.00	37.20	4.16
288	289	2.890474	GTACCGGCGCTCATGGTG	60.890	66.667	19.40	0.00	37.20	4.17
289	290	4.508128	CGTACCGGCGCTCATGGT	62.508	66.667	7.64	13.09	39.80	3.55
290	291	3.128632	TACGTACCGGCGCTCATGG	62.129	63.158	7.64	7.19	34.88	3.66
291	292	1.942712	GTACGTACCGGCGCTCATG	60.943	63.158	15.00	0.00	34.88	3.07
292	293	2.410469	GTACGTACCGGCGCTCAT	59.590	61.111	15.00	0.00	34.88	2.90
293	294	4.164664	CGTACGTACCGGCGCTCA	62.165	66.667	19.67	0.00	34.88	4.26
294	295	4.166011	ACGTACGTACCGGCGCTC	62.166	66.667	21.41	0.00	34.19	5.03
295	296	4.465512	CACGTACGTACCGGCGCT	62.466	66.667	22.34	0.00	34.19	5.92
296	297	3.739782	ATCACGTACGTACCGGCGC	62.740	63.158	22.34	0.00	34.19	6.53
297	298	1.652329	GATCACGTACGTACCGGCG	60.652	63.158	22.34	10.69	36.07	6.46
298	299	1.298638	GGATCACGTACGTACCGGC	60.299	63.158	22.34	8.79	0.00	6.13
299	300	1.010797	CGGATCACGTACGTACCGG	60.011	63.158	32.89	19.83	36.07	5.28
300	301	4.576843	CGGATCACGTACGTACCG	57.423	61.111	30.49	30.49	37.93	4.02
310	311	3.823330	AGGCGTCGGACGGATCAC	61.823	66.667	29.30	13.65	42.82	3.06
311	312	3.822192	CAGGCGTCGGACGGATCA	61.822	66.667	29.30	0.00	42.82	2.92
312	313	4.570663	CCAGGCGTCGGACGGATC	62.571	72.222	29.30	14.35	42.82	3.36
316	317	3.072486	ATTACCCAGGCGTCGGACG	62.072	63.158	25.18	25.18	45.88	4.79
317	318	1.520787	CATTACCCAGGCGTCGGAC	60.521	63.158	0.00	0.00	0.00	4.79
318	319	1.985662	ACATTACCCAGGCGTCGGA	60.986	57.895	0.00	0.00	0.00	4.55
319	320	1.813753	CACATTACCCAGGCGTCGG	60.814	63.158	0.00	0.00	0.00	4.79
320	321	1.079405	ACACATTACCCAGGCGTCG	60.079	57.895	0.00	0.00	0.00	5.12
321	322	0.036765	TGACACATTACCCAGGCGTC	60.037	55.000	0.00	0.00	0.00	5.19
322	323	0.398696	TTGACACATTACCCAGGCGT	59.601	50.000	0.00	0.00	0.00	5.68
323	324	1.401552	CATTGACACATTACCCAGGCG	59.598	52.381	0.00	0.00	0.00	5.52
324	325	1.750778	CCATTGACACATTACCCAGGC	59.249	52.381	0.00	0.00	0.00	4.85
325	326	3.085952	ACCATTGACACATTACCCAGG	57.914	47.619	0.00	0.00	0.00	4.45
326	327	4.078537	TCAACCATTGACACATTACCCAG	58.921	43.478	0.00	0.00	34.08	4.45
327	328	4.105754	TCAACCATTGACACATTACCCA	57.894	40.909	0.00	0.00	34.08	4.51
328	329	4.704540	TCATCAACCATTGACACATTACCC	59.295	41.667	0.00	0.00	43.48	3.69
329	330	5.895636	TCATCAACCATTGACACATTACC	57.104	39.130	0.00	0.00	43.48	2.85
330	331	6.913170	AGTTCATCAACCATTGACACATTAC	58.087	36.000	0.00	0.00	43.48	1.89
331	332	7.523293	AAGTTCATCAACCATTGACACATTA	57.477	32.000	0.00	0.00	43.48	1.90
332	333	6.409524	AAGTTCATCAACCATTGACACATT	57.590	33.333	0.00	0.00	43.48	2.71
333	334	6.716628	AGTAAGTTCATCAACCATTGACACAT	59.283	34.615	0.00	0.00	43.48	3.21
334	335	6.017192	CAGTAAGTTCATCAACCATTGACACA	60.017	38.462	0.00	0.00	43.48	3.72
335	336	6.204688	TCAGTAAGTTCATCAACCATTGACAC	59.795	38.462	0.00	0.00	43.48	3.67
336	337	6.295249	TCAGTAAGTTCATCAACCATTGACA	58.705	36.000	0.00	0.00	43.48	3.58
337	338	6.801539	TCAGTAAGTTCATCAACCATTGAC	57.198	37.500	0.00	0.00	43.48	3.18
338	339	7.167535	TCATCAGTAAGTTCATCAACCATTGA	58.832	34.615	0.00	0.00	45.01	2.57
339	340	7.381766	TCATCAGTAAGTTCATCAACCATTG	57.618	36.000	0.00	0.00	32.22	2.82
340	341	7.667219	ACTTCATCAGTAAGTTCATCAACCATT	59.333	33.333	0.00	0.00	33.39	3.16
341	342	7.120285	CACTTCATCAGTAAGTTCATCAACCAT	59.880	37.037	0.00	0.00	34.99	3.55
342	343	6.427853	CACTTCATCAGTAAGTTCATCAACCA	59.572	38.462	0.00	0.00	34.99	3.67
343	344	6.650807	TCACTTCATCAGTAAGTTCATCAACC	59.349	38.462	0.00	0.00	34.99	3.77
344	345	7.658179	TCACTTCATCAGTAAGTTCATCAAC	57.342	36.000	0.00	0.00	34.99	3.18
345	346	7.276438	CGATCACTTCATCAGTAAGTTCATCAA	59.724	37.037	0.00	0.00	34.99	2.57
346	347	6.753744	CGATCACTTCATCAGTAAGTTCATCA	59.246	38.462	0.00	0.00	34.99	3.07
347	348	6.975197	TCGATCACTTCATCAGTAAGTTCATC	59.025	38.462	0.00	0.00	34.99	2.92
348	349	6.867550	TCGATCACTTCATCAGTAAGTTCAT	58.132	36.000	0.00	0.00	34.99	2.57
349	350	6.267496	TCGATCACTTCATCAGTAAGTTCA	57.733	37.500	0.00	0.00	34.99	3.18
350	351	6.199908	CCATCGATCACTTCATCAGTAAGTTC	59.800	42.308	0.00	0.00	34.99	3.01
351	352	6.045318	CCATCGATCACTTCATCAGTAAGTT	58.955	40.000	0.00	0.00	34.99	2.66
352	353	5.360999	TCCATCGATCACTTCATCAGTAAGT	59.639	40.000	0.00	0.00	37.67	2.24
353	354	5.836347	TCCATCGATCACTTCATCAGTAAG	58.164	41.667	0.00	0.00	32.76	2.34
354	355	5.852282	TCCATCGATCACTTCATCAGTAA	57.148	39.130	0.00	0.00	32.76	2.24
355	356	5.776744	CATCCATCGATCACTTCATCAGTA	58.223	41.667	0.00	0.00	32.76	2.74
356	357	4.629092	CATCCATCGATCACTTCATCAGT	58.371	43.478	0.00	0.00	35.35	3.41
357	358	3.432592	GCATCCATCGATCACTTCATCAG	59.567	47.826	0.00	0.00	0.00	2.90
358	359	3.181463	TGCATCCATCGATCACTTCATCA	60.181	43.478	0.00	0.00	0.00	3.07
359	360	3.186001	GTGCATCCATCGATCACTTCATC	59.814	47.826	0.00	0.00	0.00	2.92
360	361	3.136763	GTGCATCCATCGATCACTTCAT	58.863	45.455	0.00	0.00	0.00	2.57
361	362	2.169144	AGTGCATCCATCGATCACTTCA	59.831	45.455	10.10	0.00	35.30	3.02
362	363	2.543012	CAGTGCATCCATCGATCACTTC	59.457	50.000	12.57	0.00	36.01	3.01
363	364	2.558378	CAGTGCATCCATCGATCACTT	58.442	47.619	12.57	0.00	36.01	3.16
364	365	1.809271	GCAGTGCATCCATCGATCACT	60.809	52.381	11.09	10.10	37.36	3.41
365	366	0.585357	GCAGTGCATCCATCGATCAC	59.415	55.000	11.09	0.00	31.79	3.06
366	367	0.178533	TGCAGTGCATCCATCGATCA	59.821	50.000	15.37	0.00	31.71	2.92
367	368	0.585357	GTGCAGTGCATCCATCGATC	59.415	55.000	22.87	0.39	41.91	3.69
368	369	0.179702	AGTGCAGTGCATCCATCGAT	59.820	50.000	22.87	0.00	41.91	3.59
369	370	0.741927	CAGTGCAGTGCATCCATCGA	60.742	55.000	22.87	0.00	41.91	3.59
370	371	1.719709	CAGTGCAGTGCATCCATCG	59.280	57.895	22.87	2.65	41.91	3.84
371	372	1.432251	GCAGTGCAGTGCATCCATC	59.568	57.895	35.84	7.90	41.91	3.51
372	373	3.599584	GCAGTGCAGTGCATCCAT	58.400	55.556	35.84	5.15	41.91	3.41
382	383	1.597854	CGAAGAACCCTGCAGTGCA	60.598	57.895	18.58	18.58	36.92	4.57
383	384	1.294659	CTCGAAGAACCCTGCAGTGC	61.295	60.000	13.81	8.58	34.09	4.40
384	385	0.034059	ACTCGAAGAACCCTGCAGTG	59.966	55.000	13.81	3.15	34.09	3.66
385	386	0.318762	GACTCGAAGAACCCTGCAGT	59.681	55.000	13.81	0.00	34.09	4.40
386	387	0.605589	AGACTCGAAGAACCCTGCAG	59.394	55.000	6.78	6.78	34.09	4.41
387	388	0.603569	GAGACTCGAAGAACCCTGCA	59.396	55.000	0.00	0.00	34.09	4.41
388	389	0.456995	CGAGACTCGAAGAACCCTGC	60.457	60.000	20.25	0.00	43.74	4.85
389	390	0.171455	CCGAGACTCGAAGAACCCTG	59.829	60.000	26.11	2.03	43.74	4.45
390	391	1.596895	GCCGAGACTCGAAGAACCCT	61.597	60.000	26.11	0.00	43.74	4.34
391	392	1.153804	GCCGAGACTCGAAGAACCC	60.154	63.158	26.11	1.91	43.74	4.11
392	393	1.514443	CGCCGAGACTCGAAGAACC	60.514	63.158	26.11	6.08	43.74	3.62
393	394	1.514443	CCGCCGAGACTCGAAGAAC	60.514	63.158	26.11	8.73	43.74	3.01
394	395	2.697761	CCCGCCGAGACTCGAAGAA	61.698	63.158	26.11	0.00	43.74	2.52
395	396	3.132139	CCCGCCGAGACTCGAAGA	61.132	66.667	26.11	0.00	43.74	2.87
396	397	4.856607	GCCCGCCGAGACTCGAAG	62.857	72.222	26.11	17.57	43.74	3.79
421	422	3.593794	CTCGATCGTCCCCGTCCC	61.594	72.222	15.94	0.00	35.01	4.46
422	423	2.515523	TCTCGATCGTCCCCGTCC	60.516	66.667	15.94	0.00	35.01	4.79
423	424	2.714387	GTCTCGATCGTCCCCGTC	59.286	66.667	15.94	0.00	35.01	4.79
424	425	3.200593	CGTCTCGATCGTCCCCGT	61.201	66.667	15.94	0.00	35.01	5.28
425	426	3.200593	ACGTCTCGATCGTCCCCG	61.201	66.667	15.94	14.85	36.85	5.73
430	431	2.783275	CACCGACGTCTCGATCGT	59.217	61.111	15.94	13.96	43.06	3.73
431	432	2.648102	GCACCGACGTCTCGATCG	60.648	66.667	14.70	9.36	43.06	3.69
432	433	1.583967	CAGCACCGACGTCTCGATC	60.584	63.158	14.70	0.00	43.06	3.69
433	434	2.333417	ACAGCACCGACGTCTCGAT	61.333	57.895	14.70	0.00	43.06	3.59
434	435	2.976350	ACAGCACCGACGTCTCGA	60.976	61.111	14.70	0.00	43.06	4.04
435	436	2.801162	CACAGCACCGACGTCTCG	60.801	66.667	14.70	5.97	39.83	4.04
436	437	3.106407	GCACAGCACCGACGTCTC	61.106	66.667	14.70	0.02	0.00	3.36
437	438	4.664677	GGCACAGCACCGACGTCT	62.665	66.667	14.70	0.00	0.00	4.18
438	439	4.961511	TGGCACAGCACCGACGTC	62.962	66.667	5.18	5.18	0.00	4.34
485	486	1.153823	CAGAAGACGTAGCCGGTGG	60.154	63.158	1.90	0.00	38.78	4.61
486	487	1.153823	CCAGAAGACGTAGCCGGTG	60.154	63.158	1.90	0.00	38.78	4.94
487	488	2.348888	CCCAGAAGACGTAGCCGGT	61.349	63.158	1.90	0.00	38.78	5.28
488	489	2.050350	TCCCAGAAGACGTAGCCGG	61.050	63.158	0.00	0.00	38.78	6.13
489	490	1.139095	GTCCCAGAAGACGTAGCCG	59.861	63.158	0.00	0.00	40.83	5.52
496	497	1.079057	GGAAGCCGTCCCAGAAGAC	60.079	63.158	0.00	0.00	41.10	3.01
497	498	3.388841	GGAAGCCGTCCCAGAAGA	58.611	61.111	0.00	0.00	41.10	2.87
522	523	3.118454	ATCTTGTTGGCGGCGTCG	61.118	61.111	4.29	4.29	39.81	5.12
523	524	2.480555	CATCTTGTTGGCGGCGTC	59.519	61.111	3.62	3.62	0.00	5.19
524	525	3.737172	GCATCTTGTTGGCGGCGT	61.737	61.111	9.37	0.00	0.00	5.68
525	526	3.386867	GAGCATCTTGTTGGCGGCG	62.387	63.158	0.51	0.51	0.00	6.46
526	527	2.486966	GAGCATCTTGTTGGCGGC	59.513	61.111	0.00	0.00	0.00	6.53
527	528	2.787249	CGAGCATCTTGTTGGCGG	59.213	61.111	0.00	0.00	0.00	6.13
528	529	2.099062	GCGAGCATCTTGTTGGCG	59.901	61.111	0.00	0.00	0.00	5.69
529	530	2.486966	GGCGAGCATCTTGTTGGC	59.513	61.111	0.00	0.00	32.07	4.52
530	531	2.753966	CCGGCGAGCATCTTGTTGG	61.754	63.158	9.30	0.00	0.00	3.77
531	532	2.787249	CCGGCGAGCATCTTGTTG	59.213	61.111	9.30	0.00	0.00	3.33
532	533	3.127533	GCCGGCGAGCATCTTGTT	61.128	61.111	12.58	0.00	0.00	2.83
547	548	3.326889	TACGTACGTGGTGAGCGCC	62.327	63.158	30.25	0.00	0.00	6.53
548	549	2.148365	GTACGTACGTGGTGAGCGC	61.148	63.158	30.25	0.00	0.00	5.92
549	550	0.721154	TAGTACGTACGTGGTGAGCG	59.279	55.000	30.25	0.00	0.00	5.03
550	551	1.734465	ACTAGTACGTACGTGGTGAGC	59.266	52.381	30.25	12.71	0.00	4.26
551	552	4.424626	TCTACTAGTACGTACGTGGTGAG	58.575	47.826	30.25	21.55	0.00	3.51
552	553	4.450082	TCTACTAGTACGTACGTGGTGA	57.550	45.455	30.25	17.29	0.00	4.02
553	554	5.316770	GTTTCTACTAGTACGTACGTGGTG	58.683	45.833	30.25	18.40	0.00	4.17
554	555	4.091509	CGTTTCTACTAGTACGTACGTGGT	59.908	45.833	30.25	22.33	0.00	4.16
555	556	4.569029	CGTTTCTACTAGTACGTACGTGG	58.431	47.826	30.25	18.32	0.00	4.94
556	557	4.015977	GCGTTTCTACTAGTACGTACGTG	58.984	47.826	30.25	16.00	36.45	4.49
557	558	3.062234	GGCGTTTCTACTAGTACGTACGT	59.938	47.826	25.98	25.98	36.45	3.57
558	559	3.062099	TGGCGTTTCTACTAGTACGTACG	59.938	47.826	19.49	15.01	36.45	3.67
559	560	4.600012	TGGCGTTTCTACTAGTACGTAC	57.400	45.455	18.10	18.10	36.45	3.67
560	561	4.035558	CCATGGCGTTTCTACTAGTACGTA	59.964	45.833	15.29	7.37	36.45	3.57
561	562	3.181493	CCATGGCGTTTCTACTAGTACGT	60.181	47.826	15.29	0.00	36.45	3.57
562	563	3.369385	CCATGGCGTTTCTACTAGTACG	58.631	50.000	10.81	10.81	37.09	3.67
563	564	3.714391	CCCATGGCGTTTCTACTAGTAC	58.286	50.000	6.09	0.00	0.00	2.73
564	565	2.101917	GCCCATGGCGTTTCTACTAGTA	59.898	50.000	6.09	1.89	39.62	1.82
565	566	1.134491	GCCCATGGCGTTTCTACTAGT	60.134	52.381	6.09	0.00	39.62	2.57
566	567	1.583054	GCCCATGGCGTTTCTACTAG	58.417	55.000	6.09	0.00	39.62	2.57
567	568	3.772619	GCCCATGGCGTTTCTACTA	57.227	52.632	6.09	0.00	39.62	1.82
568	569	4.637771	GCCCATGGCGTTTCTACT	57.362	55.556	6.09	0.00	39.62	2.57
578	579	1.374505	CAAACGCCAAAGCCCATGG	60.375	57.895	4.14	4.14	41.08	3.66
579	580	1.374505	CCAAACGCCAAAGCCCATG	60.375	57.895	0.00	0.00	34.57	3.66
580	581	2.582493	CCCAAACGCCAAAGCCCAT	61.582	57.895	0.00	0.00	34.57	4.00
581	582	3.230245	CCCAAACGCCAAAGCCCA	61.230	61.111	0.00	0.00	34.57	5.36
582	583	4.680237	GCCCAAACGCCAAAGCCC	62.680	66.667	0.00	0.00	34.57	5.19
584	585	2.796245	CTACGCCCAAACGCCAAAGC	62.796	60.000	0.00	0.00	36.19	3.51
585	586	1.209127	CTACGCCCAAACGCCAAAG	59.791	57.895	0.00	0.00	36.19	2.77
586	587	2.910345	GCTACGCCCAAACGCCAAA	61.910	57.895	0.00	0.00	36.19	3.28
587	588	3.358707	GCTACGCCCAAACGCCAA	61.359	61.111	0.00	0.00	36.19	4.52
599	600	3.047280	TTGGCGTTGCTGGCTACG	61.047	61.111	20.88	20.88	45.08	3.51
600	601	1.586154	ATGTTGGCGTTGCTGGCTAC	61.586	55.000	5.70	5.70	39.81	3.58
601	602	1.303236	ATGTTGGCGTTGCTGGCTA	60.303	52.632	0.00	0.00	35.06	3.93
602	603	2.598394	ATGTTGGCGTTGCTGGCT	60.598	55.556	0.00	0.00	35.06	4.75
603	604	2.431260	CATGTTGGCGTTGCTGGC	60.431	61.111	0.00	0.00	0.00	4.85
604	605	0.249405	AAACATGTTGGCGTTGCTGG	60.249	50.000	12.82	0.00	0.00	4.85
605	606	0.854062	CAAACATGTTGGCGTTGCTG	59.146	50.000	12.82	0.00	0.00	4.41
606	607	0.249405	CCAAACATGTTGGCGTTGCT	60.249	50.000	12.82	0.00	32.18	3.91
607	608	2.224428	CCAAACATGTTGGCGTTGC	58.776	52.632	12.82	0.00	32.18	4.17
613	614	1.202463	TGGAAACGCCAAACATGTTGG	60.202	47.619	12.82	15.89	45.87	3.77
614	615	2.215907	TGGAAACGCCAAACATGTTG	57.784	45.000	12.82	6.46	45.87	3.33
630	631	5.054477	GCTAGCGTTTTAGTTCCATATGGA	58.946	41.667	20.98	20.98	43.73	3.41
631	632	5.057149	AGCTAGCGTTTTAGTTCCATATGG	58.943	41.667	16.25	16.25	0.00	2.74
632	633	6.128795	GCTAGCTAGCGTTTTAGTTCCATATG	60.129	42.308	28.89	0.00	39.82	1.78
633	634	5.927115	GCTAGCTAGCGTTTTAGTTCCATAT	59.073	40.000	28.89	0.00	39.82	1.78
634	635	5.287226	GCTAGCTAGCGTTTTAGTTCCATA	58.713	41.667	28.89	0.00	39.82	2.74
635	636	4.120589	GCTAGCTAGCGTTTTAGTTCCAT	58.879	43.478	28.89	0.00	39.82	3.41
636	637	3.518590	GCTAGCTAGCGTTTTAGTTCCA	58.481	45.455	28.89	0.00	39.82	3.53
649	650	1.009829	CCAAACGCCAAGCTAGCTAG	58.990	55.000	19.70	16.84	0.00	3.42
650	651	0.611200	TCCAAACGCCAAGCTAGCTA	59.389	50.000	19.70	0.00	0.00	3.32
651	652	0.035056	ATCCAAACGCCAAGCTAGCT	60.035	50.000	12.68	12.68	0.00	3.32
652	653	0.099436	CATCCAAACGCCAAGCTAGC	59.901	55.000	6.62	6.62	0.00	3.42
653	654	1.131126	CACATCCAAACGCCAAGCTAG	59.869	52.381	0.00	0.00	0.00	3.42
654	655	1.164411	CACATCCAAACGCCAAGCTA	58.836	50.000	0.00	0.00	0.00	3.32
655	656	1.526575	CCACATCCAAACGCCAAGCT	61.527	55.000	0.00	0.00	0.00	3.74
656	657	1.080569	CCACATCCAAACGCCAAGC	60.081	57.895	0.00	0.00	0.00	4.01
657	658	0.523072	CTCCACATCCAAACGCCAAG	59.477	55.000	0.00	0.00	0.00	3.61
658	659	1.523154	GCTCCACATCCAAACGCCAA	61.523	55.000	0.00	0.00	0.00	4.52
659	660	1.971167	GCTCCACATCCAAACGCCA	60.971	57.895	0.00	0.00	0.00	5.69
660	661	1.675641	AGCTCCACATCCAAACGCC	60.676	57.895	0.00	0.00	0.00	5.68
661	662	0.955428	TCAGCTCCACATCCAAACGC	60.955	55.000	0.00	0.00	0.00	4.84
662	663	1.466167	CTTCAGCTCCACATCCAAACG	59.534	52.381	0.00	0.00	0.00	3.60
663	664	1.200948	GCTTCAGCTCCACATCCAAAC	59.799	52.381	0.00	0.00	38.21	2.93
664	665	1.538047	GCTTCAGCTCCACATCCAAA	58.462	50.000	0.00	0.00	38.21	3.28
665	666	0.674581	CGCTTCAGCTCCACATCCAA	60.675	55.000	0.00	0.00	39.32	3.53
666	667	1.078918	CGCTTCAGCTCCACATCCA	60.079	57.895	0.00	0.00	39.32	3.41
667	668	2.467826	GCGCTTCAGCTCCACATCC	61.468	63.158	0.00	0.00	39.32	3.51
668	669	0.179100	TAGCGCTTCAGCTCCACATC	60.179	55.000	18.68	0.00	45.67	3.06
669	670	0.179089	CTAGCGCTTCAGCTCCACAT	60.179	55.000	18.68	0.00	45.67	3.21
670	671	1.216444	CTAGCGCTTCAGCTCCACA	59.784	57.895	18.68	0.00	45.67	4.17
671	672	0.103937	ATCTAGCGCTTCAGCTCCAC	59.896	55.000	18.68	0.00	45.67	4.02
672	673	1.338337	GTATCTAGCGCTTCAGCTCCA	59.662	52.381	18.68	0.00	45.67	3.86
673	674	1.336424	GGTATCTAGCGCTTCAGCTCC	60.336	57.143	18.68	8.36	45.67	4.70
674	675	1.611491	AGGTATCTAGCGCTTCAGCTC	59.389	52.381	18.68	1.93	45.67	4.09
676	677	1.664588	CGAGGTATCTAGCGCTTCAGC	60.665	57.143	18.68	8.30	37.78	4.26
677	678	1.068885	CCGAGGTATCTAGCGCTTCAG	60.069	57.143	18.68	8.35	0.00	3.02
678	679	0.952280	CCGAGGTATCTAGCGCTTCA	59.048	55.000	18.68	1.90	0.00	3.02
679	680	0.387494	GCCGAGGTATCTAGCGCTTC	60.387	60.000	18.68	3.62	0.00	3.86
680	681	1.660917	GCCGAGGTATCTAGCGCTT	59.339	57.895	18.68	0.00	0.00	4.68
681	682	2.618219	CGCCGAGGTATCTAGCGCT	61.618	63.158	17.26	17.26	38.45	5.92
682	683	2.126812	CGCCGAGGTATCTAGCGC	60.127	66.667	0.00	0.00	38.45	5.92
683	684	0.030369	AAACGCCGAGGTATCTAGCG	59.970	55.000	16.18	16.18	45.62	4.26
684	685	2.220479	AAAACGCCGAGGTATCTAGC	57.780	50.000	0.00	0.00	0.00	3.42
685	686	7.310664	TCATATAAAAACGCCGAGGTATCTAG	58.689	38.462	0.00	0.00	0.00	2.43
686	687	7.218228	TCATATAAAAACGCCGAGGTATCTA	57.782	36.000	0.00	0.00	0.00	1.98
687	688	6.092955	TCATATAAAAACGCCGAGGTATCT	57.907	37.500	0.00	0.00	0.00	1.98
688	689	6.643770	TCTTCATATAAAAACGCCGAGGTATC	59.356	38.462	0.00	0.00	0.00	2.24
689	690	6.518493	TCTTCATATAAAAACGCCGAGGTAT	58.482	36.000	0.00	0.00	0.00	2.73
690	691	5.904941	TCTTCATATAAAAACGCCGAGGTA	58.095	37.500	0.00	0.00	0.00	3.08
691	692	4.761975	TCTTCATATAAAAACGCCGAGGT	58.238	39.130	0.00	0.00	0.00	3.85
692	693	5.522460	TCTTCTTCATATAAAAACGCCGAGG	59.478	40.000	0.00	0.00	0.00	4.63
693	694	6.583912	TCTTCTTCATATAAAAACGCCGAG	57.416	37.500	0.00	0.00	0.00	4.63
694	695	6.971527	TTCTTCTTCATATAAAAACGCCGA	57.028	33.333	0.00	0.00	0.00	5.54
695	696	6.192137	CGTTTCTTCTTCATATAAAAACGCCG	59.808	38.462	4.80	0.00	40.33	6.46
696	697	7.419321	CGTTTCTTCTTCATATAAAAACGCC	57.581	36.000	4.80	0.00	40.33	5.68
698	699	7.007099	GTGGCGTTTCTTCTTCATATAAAAACG	59.993	37.037	11.75	11.75	45.96	3.60
699	700	7.007099	CGTGGCGTTTCTTCTTCATATAAAAAC	59.993	37.037	0.00	0.00	0.00	2.43
700	701	7.018826	CGTGGCGTTTCTTCTTCATATAAAAA	58.981	34.615	0.00	0.00	0.00	1.94
701	702	6.402766	CCGTGGCGTTTCTTCTTCATATAAAA	60.403	38.462	0.00	0.00	0.00	1.52
702	703	5.064198	CCGTGGCGTTTCTTCTTCATATAAA	59.936	40.000	0.00	0.00	0.00	1.40
703	704	4.569162	CCGTGGCGTTTCTTCTTCATATAA	59.431	41.667	0.00	0.00	0.00	0.98
704	705	4.116961	CCGTGGCGTTTCTTCTTCATATA	58.883	43.478	0.00	0.00	0.00	0.86
705	706	2.936498	CCGTGGCGTTTCTTCTTCATAT	59.064	45.455	0.00	0.00	0.00	1.78
706	707	2.289195	ACCGTGGCGTTTCTTCTTCATA	60.289	45.455	0.00	0.00	0.00	2.15
707	708	1.156736	CCGTGGCGTTTCTTCTTCAT	58.843	50.000	0.00	0.00	0.00	2.57
708	709	0.179067	ACCGTGGCGTTTCTTCTTCA	60.179	50.000	0.00	0.00	0.00	3.02
709	710	0.511653	GACCGTGGCGTTTCTTCTTC	59.488	55.000	0.00	0.00	0.00	2.87
710	711	0.106149	AGACCGTGGCGTTTCTTCTT	59.894	50.000	0.00	0.00	0.00	2.52
711	712	0.963962	TAGACCGTGGCGTTTCTTCT	59.036	50.000	0.00	0.00	0.00	2.85
712	713	1.659098	CATAGACCGTGGCGTTTCTTC	59.341	52.381	0.00	0.00	0.00	2.87
713	714	1.674817	CCATAGACCGTGGCGTTTCTT	60.675	52.381	0.00	0.00	0.00	2.52
714	715	0.108329	CCATAGACCGTGGCGTTTCT	60.108	55.000	0.00	0.00	0.00	2.52
715	716	2.380081	CCATAGACCGTGGCGTTTC	58.620	57.895	0.00	0.00	0.00	2.78
716	717	4.609995	CCATAGACCGTGGCGTTT	57.390	55.556	0.00	0.00	0.00	3.60
721	722	0.464373	AGCAATGCCATAGACCGTGG	60.464	55.000	0.00	0.00	39.80	4.94
722	723	2.238942	TAGCAATGCCATAGACCGTG	57.761	50.000	0.00	0.00	0.00	4.94
723	724	3.275617	TTTAGCAATGCCATAGACCGT	57.724	42.857	0.00	0.00	0.00	4.83
724	725	4.498009	CCTTTTTAGCAATGCCATAGACCG	60.498	45.833	0.00	0.00	0.00	4.79
725	726	4.402474	ACCTTTTTAGCAATGCCATAGACC	59.598	41.667	0.00	0.00	0.00	3.85
726	727	5.125417	TGACCTTTTTAGCAATGCCATAGAC	59.875	40.000	0.00	0.00	0.00	2.59
727	728	5.260424	TGACCTTTTTAGCAATGCCATAGA	58.740	37.500	0.00	0.00	0.00	1.98
728	729	5.581126	TGACCTTTTTAGCAATGCCATAG	57.419	39.130	0.00	0.00	0.00	2.23
729	730	5.991933	TTGACCTTTTTAGCAATGCCATA	57.008	34.783	0.00	0.00	0.00	2.74
730	731	4.888326	TTGACCTTTTTAGCAATGCCAT	57.112	36.364	0.00	0.00	0.00	4.40
731	732	4.679373	TTTGACCTTTTTAGCAATGCCA	57.321	36.364	0.00	0.00	0.00	4.92
732	733	4.327087	CGATTTGACCTTTTTAGCAATGCC	59.673	41.667	0.00	0.00	0.00	4.40
733	734	4.923281	ACGATTTGACCTTTTTAGCAATGC	59.077	37.500	0.00	0.00	0.00	3.56
734	735	6.148948	TCACGATTTGACCTTTTTAGCAATG	58.851	36.000	0.00	0.00	0.00	2.82
735	736	6.325919	TCACGATTTGACCTTTTTAGCAAT	57.674	33.333	0.00	0.00	0.00	3.56
736	737	5.759506	TCACGATTTGACCTTTTTAGCAA	57.240	34.783	0.00	0.00	0.00	3.91
737	738	5.759506	TTCACGATTTGACCTTTTTAGCA	57.240	34.783	0.00	0.00	32.26	3.49
738	739	8.021396	AGTATTTCACGATTTGACCTTTTTAGC	58.979	33.333	0.00	0.00	32.26	3.09
739	740	9.893305	AAGTATTTCACGATTTGACCTTTTTAG	57.107	29.630	0.00	0.00	32.26	1.85
760	761	9.825972	CACAAAATAAACTCGACATGAAAGTAT	57.174	29.630	0.00	0.00	0.00	2.12
761	762	9.047371	TCACAAAATAAACTCGACATGAAAGTA	57.953	29.630	0.00	0.00	0.00	2.24
762	763	7.855904	GTCACAAAATAAACTCGACATGAAAGT	59.144	33.333	0.00	0.00	0.00	2.66
763	764	7.855409	TGTCACAAAATAAACTCGACATGAAAG	59.145	33.333	0.00	0.00	0.00	2.62
764	765	7.698628	TGTCACAAAATAAACTCGACATGAAA	58.301	30.769	0.00	0.00	0.00	2.69
765	766	7.252965	TGTCACAAAATAAACTCGACATGAA	57.747	32.000	0.00	0.00	0.00	2.57
766	767	6.852858	TGTCACAAAATAAACTCGACATGA	57.147	33.333	0.00	0.00	0.00	3.07
767	768	7.906611	TTTGTCACAAAATAAACTCGACATG	57.093	32.000	0.00	0.00	32.45	3.21
768	769	8.918961	TTTTTGTCACAAAATAAACTCGACAT	57.081	26.923	16.41	0.00	32.45	3.06
769	770	8.918961	ATTTTTGTCACAAAATAAACTCGACA	57.081	26.923	16.41	0.00	0.00	4.35
770	771	9.618410	CAATTTTTGTCACAAAATAAACTCGAC	57.382	29.630	16.41	0.00	0.00	4.20
771	772	8.324567	GCAATTTTTGTCACAAAATAAACTCGA	58.675	29.630	16.41	0.00	0.00	4.04
772	773	8.327429	AGCAATTTTTGTCACAAAATAAACTCG	58.673	29.630	16.41	3.32	0.00	4.18
773	774	9.424659	CAGCAATTTTTGTCACAAAATAAACTC	57.575	29.630	16.41	4.85	0.00	3.01
774	775	9.160496	TCAGCAATTTTTGTCACAAAATAAACT	57.840	25.926	16.41	9.36	0.00	2.66
775	776	9.766277	TTCAGCAATTTTTGTCACAAAATAAAC	57.234	25.926	16.41	7.37	0.00	2.01
779	780	9.344309	CTTTTTCAGCAATTTTTGTCACAAAAT	57.656	25.926	16.41	0.00	0.00	1.82
780	781	8.348507	ACTTTTTCAGCAATTTTTGTCACAAAA	58.651	25.926	11.83	11.83	0.00	2.44
781	782	7.869800	ACTTTTTCAGCAATTTTTGTCACAAA	58.130	26.923	0.00	0.00	0.00	2.83
782	783	7.172190	TGACTTTTTCAGCAATTTTTGTCACAA	59.828	29.630	0.00	0.00	0.00	3.33
783	784	6.648310	TGACTTTTTCAGCAATTTTTGTCACA	59.352	30.769	0.00	0.00	0.00	3.58
784	785	7.059448	TGACTTTTTCAGCAATTTTTGTCAC	57.941	32.000	0.00	0.00	0.00	3.67
785	786	7.846644	ATGACTTTTTCAGCAATTTTTGTCA	57.153	28.000	0.00	0.00	37.77	3.58
790	791	8.863049	CGCTATTATGACTTTTTCAGCAATTTT	58.137	29.630	0.00	0.00	37.77	1.82
791	792	8.243426	TCGCTATTATGACTTTTTCAGCAATTT	58.757	29.630	0.00	0.00	37.77	1.82
792	793	7.761409	TCGCTATTATGACTTTTTCAGCAATT	58.239	30.769	0.00	0.00	37.77	2.32
793	794	7.320443	TCGCTATTATGACTTTTTCAGCAAT	57.680	32.000	0.00	0.00	37.77	3.56
794	795	6.735678	TCGCTATTATGACTTTTTCAGCAA	57.264	33.333	0.00	0.00	37.77	3.91
795	796	6.925610	ATCGCTATTATGACTTTTTCAGCA	57.074	33.333	0.00	0.00	37.77	4.41
796	797	7.110765	CGAAATCGCTATTATGACTTTTTCAGC	59.889	37.037	0.00	0.00	37.77	4.26
797	798	7.584123	CCGAAATCGCTATTATGACTTTTTCAG	59.416	37.037	0.00	0.00	36.32	3.02
798	799	7.406553	CCGAAATCGCTATTATGACTTTTTCA	58.593	34.615	0.00	0.00	36.96	2.69
799	800	6.357240	GCCGAAATCGCTATTATGACTTTTTC	59.643	38.462	0.00	0.00	38.18	2.29
800	801	6.199393	GCCGAAATCGCTATTATGACTTTTT	58.801	36.000	0.00	0.00	38.18	1.94
801	802	5.277828	GGCCGAAATCGCTATTATGACTTTT	60.278	40.000	0.00	0.00	38.18	2.27
802	803	4.213482	GGCCGAAATCGCTATTATGACTTT	59.787	41.667	0.00	0.00	38.18	2.66
803	804	3.746492	GGCCGAAATCGCTATTATGACTT	59.254	43.478	0.00	0.00	38.18	3.01
804	805	3.244078	TGGCCGAAATCGCTATTATGACT	60.244	43.478	0.00	0.00	38.18	3.41
805	806	3.064207	TGGCCGAAATCGCTATTATGAC	58.936	45.455	0.00	0.00	38.18	3.06
806	807	3.325870	CTGGCCGAAATCGCTATTATGA	58.674	45.455	0.00	0.00	38.18	2.15
807	808	2.159653	GCTGGCCGAAATCGCTATTATG	60.160	50.000	0.00	0.00	38.18	1.90
808	809	2.076863	GCTGGCCGAAATCGCTATTAT	58.923	47.619	0.00	0.00	38.18	1.28
809	810	1.508632	GCTGGCCGAAATCGCTATTA	58.491	50.000	0.00	0.00	38.18	0.98
810	811	1.166531	GGCTGGCCGAAATCGCTATT	61.167	55.000	0.00	0.00	38.18	1.73
811	812	1.598130	GGCTGGCCGAAATCGCTAT	60.598	57.895	0.00	0.00	38.18	2.97
812	813	2.203015	GGCTGGCCGAAATCGCTA	60.203	61.111	0.00	0.00	38.18	4.26
846	847	3.605749	TAGACGCAGCTGTTGGGCC	62.606	63.158	16.64	0.00	43.14	5.80
847	848	2.047274	TAGACGCAGCTGTTGGGC	60.047	61.111	16.64	7.45	43.14	5.36
848	849	1.741770	GGTAGACGCAGCTGTTGGG	60.742	63.158	16.64	7.01	44.76	4.12
849	850	1.005037	TGGTAGACGCAGCTGTTGG	60.005	57.895	16.64	7.77	0.00	3.77
850	851	1.291877	GGTGGTAGACGCAGCTGTTG	61.292	60.000	16.64	11.03	0.00	3.33
851	852	1.004918	GGTGGTAGACGCAGCTGTT	60.005	57.895	16.64	2.11	0.00	3.16
852	853	2.657237	GGTGGTAGACGCAGCTGT	59.343	61.111	16.64	0.00	0.00	4.40
853	854	2.125512	GGGTGGTAGACGCAGCTG	60.126	66.667	10.11	10.11	37.46	4.24
854	855	3.391382	GGGGTGGTAGACGCAGCT	61.391	66.667	0.00	0.00	39.30	4.24
855	856	4.468689	GGGGGTGGTAGACGCAGC	62.469	72.222	0.00	0.00	39.30	5.25
869	870	3.787001	GAGGACTTGGAGCGGGGG	61.787	72.222	0.00	0.00	0.00	5.40
870	871	3.787001	GGAGGACTTGGAGCGGGG	61.787	72.222	0.00	0.00	0.00	5.73
871	872	2.685380	AGGAGGACTTGGAGCGGG	60.685	66.667	0.00	0.00	0.00	6.13
872	873	2.726351	GGAGGAGGACTTGGAGCGG	61.726	68.421	0.00	0.00	0.00	5.52
873	874	2.726351	GGGAGGAGGACTTGGAGCG	61.726	68.421	0.00	0.00	0.00	5.03
874	875	2.371259	GGGGAGGAGGACTTGGAGC	61.371	68.421	0.00	0.00	0.00	4.70
875	876	2.060980	CGGGGAGGAGGACTTGGAG	61.061	68.421	0.00	0.00	0.00	3.86
876	877	1.886730	ATCGGGGAGGAGGACTTGGA	61.887	60.000	0.00	0.00	0.00	3.53
877	878	1.383248	ATCGGGGAGGAGGACTTGG	60.383	63.158	0.00	0.00	0.00	3.61
878	879	1.403687	GGATCGGGGAGGAGGACTTG	61.404	65.000	0.00	0.00	0.00	3.16
879	880	1.075151	GGATCGGGGAGGAGGACTT	60.075	63.158	0.00	0.00	0.00	3.01
880	881	2.609920	GGATCGGGGAGGAGGACT	59.390	66.667	0.00	0.00	0.00	3.85
985	1005	2.503061	CATGTGGGAGCGAGAGGG	59.497	66.667	0.00	0.00	0.00	4.30
1005	1025	0.474614	TGTCCGTGGGTTTGATTGGA	59.525	50.000	0.00	0.00	0.00	3.53
1008	1028	0.538746	GGGTGTCCGTGGGTTTGATT	60.539	55.000	0.00	0.00	0.00	2.57
1022	1042	2.086869	CGATCTTGCTCATTTGGGTGT	58.913	47.619	0.00	0.00	0.00	4.16
1031	3759	2.184322	GGACGCCGATCTTGCTCA	59.816	61.111	0.00	0.00	0.00	4.26
1135	4075	2.499205	CGTATCCAGCGGGCTGAA	59.501	61.111	21.59	1.26	46.30	3.02
1247	4199	2.465055	CTGGAACCAGAACGGGGACC	62.465	65.000	14.94	0.00	46.51	4.46
1560	4530	1.025113	TCCTCTCAGCGTAGTCGTGG	61.025	60.000	0.00	0.00	39.49	4.94
1803	4803	1.519719	CAGGTGGGAGTAGCAGAGC	59.480	63.158	0.00	0.00	0.00	4.09
1935	4937	0.036388	TCTCCACTTTCACCCATCGC	60.036	55.000	0.00	0.00	0.00	4.58
2014	5016	1.274703	ATGCACCCCGGAATCTCTGT	61.275	55.000	0.73	0.00	0.00	3.41
2049	5051	1.065345	TCGTCAACCTCACCCACAAAA	60.065	47.619	0.00	0.00	0.00	2.44
2071	5076	4.767255	GCAGGTGACCCAGGAGCG	62.767	72.222	0.00	0.00	0.00	5.03
2088	5093	1.360551	CTCCATGGAGTAGACGCCG	59.639	63.158	30.55	5.53	38.78	6.46
2133	5138	3.246112	CCCCAAGGACCACCGACA	61.246	66.667	0.00	0.00	41.83	4.35
2143	5148	2.954318	CAGCATCATACTTTCCCCAAGG	59.046	50.000	0.00	0.00	36.72	3.61
2183	5188	4.764679	TCTGCAAATGGTATCACAACAC	57.235	40.909	0.00	0.00	0.00	3.32
2246	5259	3.686726	GCCAGATGTACCTGAAGAACTTG	59.313	47.826	1.10	0.00	36.29	3.16
2376	5426	7.200434	TCAGAGCCAAAGGATTTATAGAAGT	57.800	36.000	0.00	0.00	35.03	3.01
2379	5429	9.784531	CTTAATCAGAGCCAAAGGATTTATAGA	57.215	33.333	0.00	0.00	35.03	1.98
2384	5434	5.420104	CACCTTAATCAGAGCCAAAGGATTT	59.580	40.000	6.43	0.00	39.26	2.17
2403	5453	1.079819	CTGTCATCGCCGACACCTT	60.080	57.895	0.00	0.00	40.94	3.50
2495	5803	6.873605	CACCAGTACATTAACTTCATCAGACA	59.126	38.462	0.00	0.00	0.00	3.41
2498	5806	7.604164	ACTTCACCAGTACATTAACTTCATCAG	59.396	37.037	0.00	0.00	31.97	2.90
2549	5857	8.629158	GGATCTACCAACAACATGCAATAATAA	58.371	33.333	0.00	0.00	38.79	1.40
2554	5862	4.343231	TGGATCTACCAACAACATGCAAT	58.657	39.130	0.00	0.00	46.75	3.56
2555	5863	3.760738	TGGATCTACCAACAACATGCAA	58.239	40.909	0.00	0.00	46.75	4.08
2556	5864	3.431673	TGGATCTACCAACAACATGCA	57.568	42.857	0.00	0.00	46.75	3.96
2574	5882	9.954763	GCAAGTTCATGCTCATCCAAGTAATGG	62.955	44.444	0.00	0.00	45.80	3.16
2575	5883	6.263344	CAAGTTCATGCTCATCCAAGTAATG	58.737	40.000	0.00	0.00	0.00	1.90
2578	5886	3.691118	GCAAGTTCATGCTCATCCAAGTA	59.309	43.478	0.00	0.00	43.06	2.24
2676	5984	2.994387	TAATCGCCCTGCTCGCCATG	62.994	60.000	0.00	0.00	0.00	3.66
2705	6408	7.624549	AGTAATGGATCTTAGAAACAGCTTGA	58.375	34.615	0.00	0.00	0.00	3.02
2707	6410	8.734386	CAAAGTAATGGATCTTAGAAACAGCTT	58.266	33.333	0.00	0.00	0.00	3.74
2709	6412	8.268850	TCAAAGTAATGGATCTTAGAAACAGC	57.731	34.615	0.00	0.00	0.00	4.40
2714	6417	9.807921	AGGTTTTCAAAGTAATGGATCTTAGAA	57.192	29.630	0.00	0.00	0.00	2.10
2715	6418	9.449719	GAGGTTTTCAAAGTAATGGATCTTAGA	57.550	33.333	0.00	0.00	0.00	2.10
2717	6420	9.231297	CAGAGGTTTTCAAAGTAATGGATCTTA	57.769	33.333	0.00	0.00	0.00	2.10
2721	6424	6.149474	CGACAGAGGTTTTCAAAGTAATGGAT	59.851	38.462	0.00	0.00	0.00	3.41
2722	6425	5.468746	CGACAGAGGTTTTCAAAGTAATGGA	59.531	40.000	0.00	0.00	0.00	3.41
2723	6426	5.238650	ACGACAGAGGTTTTCAAAGTAATGG	59.761	40.000	0.00	0.00	0.00	3.16
2724	6427	6.202954	AGACGACAGAGGTTTTCAAAGTAATG	59.797	38.462	0.00	0.00	0.00	1.90
2725	6428	6.202954	CAGACGACAGAGGTTTTCAAAGTAAT	59.797	38.462	0.00	0.00	0.00	1.89
2726	6429	5.522460	CAGACGACAGAGGTTTTCAAAGTAA	59.478	40.000	0.00	0.00	0.00	2.24
2727	6430	5.047847	CAGACGACAGAGGTTTTCAAAGTA	58.952	41.667	0.00	0.00	0.00	2.24
2728	6431	3.871594	CAGACGACAGAGGTTTTCAAAGT	59.128	43.478	0.00	0.00	0.00	2.66
2729	6432	4.119862	TCAGACGACAGAGGTTTTCAAAG	58.880	43.478	0.00	0.00	0.00	2.77
2730	6433	4.131649	TCAGACGACAGAGGTTTTCAAA	57.868	40.909	0.00	0.00	0.00	2.69
2731	6434	3.812156	TCAGACGACAGAGGTTTTCAA	57.188	42.857	0.00	0.00	0.00	2.69
2732	6435	3.812156	TTCAGACGACAGAGGTTTTCA	57.188	42.857	0.00	0.00	0.00	2.69
2811	6522	7.468441	TGTGTCAACAAAACAACTACTGTATG	58.532	34.615	0.00	0.00	32.52	2.39
2814	6525	5.950758	TGTGTCAACAAAACAACTACTGT	57.049	34.783	0.00	0.00	34.38	3.55
2850	6564	2.438868	ACGCCTTGGCAAAGAATTTC	57.561	45.000	12.45	0.00	35.03	2.17
2950	8133	9.092876	GGTTCAAATTAACACAAACAGAATTCA	57.907	29.630	8.44	0.00	0.00	2.57
2951	8134	8.547894	GGGTTCAAATTAACACAAACAGAATTC	58.452	33.333	0.00	0.00	32.80	2.17
3036	8221	9.237846	CTGAAAACATTTCTGTTACTCCTTTTC	57.762	33.333	4.65	0.00	44.83	2.29
3053	8238	3.941483	CGGGAGTTATCAGCTGAAAACAT	59.059	43.478	22.50	6.22	0.00	2.71
3054	8239	3.244422	ACGGGAGTTATCAGCTGAAAACA	60.244	43.478	22.50	3.43	43.33	2.83
3055	8240	3.335579	ACGGGAGTTATCAGCTGAAAAC	58.664	45.455	22.50	10.41	43.33	2.43
3160	8432	8.259411	TGTTAAAAAGGAGTAACACTAGTGTCA	58.741	33.333	28.04	12.47	44.13	3.58
3182	8454	9.961265	CCATAGAAACGATCTTATGTACTGTTA	57.039	33.333	0.00	0.00	39.71	2.41
3185	8457	6.923508	TGCCATAGAAACGATCTTATGTACTG	59.076	38.462	0.00	0.00	39.71	2.74
3211	8485	5.858381	AGTTGAACTCTTCTATGTGCAGAA	58.142	37.500	0.00	0.00	33.55	3.02
3272	8570	0.390998	GCTTCTGCCAGGTGAGAGAC	60.391	60.000	0.00	0.00	0.00	3.36
3376	8699	3.365472	TGATAGCACAGCTGAAGTAGGA	58.635	45.455	23.35	0.00	40.10	2.94

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.