Multiple sequence alignment - TraesCS6B01G064700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G064700 chr6B 100.000 4364 0 0 1 4364 42810506 42814869 0.000000e+00 8059.0
1 TraesCS6B01G064700 chr6B 85.470 117 17 0 1887 2003 9322521 9322405 5.930000e-24 122.0
2 TraesCS6B01G064700 chr6B 87.500 112 6 5 1121 1229 394427769 394427663 5.930000e-24 122.0
3 TraesCS6B01G064700 chr6A 91.059 1331 84 8 3015 4334 24423861 24425167 0.000000e+00 1766.0
4 TraesCS6B01G064700 chr6A 86.474 1279 114 24 1887 3124 24422611 24423871 0.000000e+00 1349.0
5 TraesCS6B01G064700 chr6A 79.948 773 68 48 87 814 24420043 24420773 5.070000e-134 488.0
6 TraesCS6B01G064700 chr6A 83.444 302 22 13 825 1106 24420832 24421125 5.600000e-64 255.0
7 TraesCS6B01G064700 chr6A 86.957 115 7 5 1118 1229 375851059 375851168 5.930000e-24 122.0
8 TraesCS6B01G064700 chrUn 92.016 1265 66 4 3005 4269 93837740 93838969 0.000000e+00 1744.0
9 TraesCS6B01G064700 chrUn 88.569 1216 87 22 1887 3078 93836566 93837753 0.000000e+00 1428.0
10 TraesCS6B01G064700 chrUn 81.383 752 54 31 87 796 93834691 93835398 6.420000e-148 534.0
11 TraesCS6B01G064700 chrUn 86.957 115 7 5 1118 1229 86496851 86496960 5.930000e-24 122.0
12 TraesCS6B01G064700 chrUn 86.726 113 6 6 1121 1229 45109563 45109456 2.760000e-22 117.0
13 TraesCS6B01G064700 chrUn 94.595 74 4 0 4261 4334 93839124 93839197 9.920000e-22 115.0
14 TraesCS6B01G064700 chr4D 83.031 1544 170 45 1887 3400 419338954 419337473 0.000000e+00 1315.0
15 TraesCS6B01G064700 chr4D 79.878 164 16 12 920 1073 419339856 419339700 2.150000e-18 104.0
16 TraesCS6B01G064700 chr4B 82.299 1531 179 45 1887 3400 517438993 517437538 0.000000e+00 1242.0
17 TraesCS6B01G064700 chr4B 98.718 78 1 0 1673 1750 435487567 435487644 5.890000e-29 139.0
18 TraesCS6B01G064700 chr4B 76.891 238 36 15 878 1112 517439756 517439535 2.760000e-22 117.0
19 TraesCS6B01G064700 chr4B 95.556 45 2 0 517 561 517440180 517440136 6.050000e-09 73.1
20 TraesCS6B01G064700 chr4A 80.802 1521 183 49 1887 3390 45143892 45145320 0.000000e+00 1090.0
21 TraesCS6B01G064700 chr5B 89.286 420 34 10 3744 4159 196469887 196469475 2.330000e-142 516.0
22 TraesCS6B01G064700 chr5B 95.238 84 3 1 1668 1750 538135079 538134996 9.850000e-27 132.0
23 TraesCS6B01G064700 chr5B 86.842 114 6 6 1121 1230 130604196 130604088 7.670000e-23 119.0
24 TraesCS6B01G064700 chr5A 88.249 417 36 11 3747 4159 230071317 230070910 1.820000e-133 486.0
25 TraesCS6B01G064700 chr5A 98.718 78 1 0 1673 1750 14605797 14605720 5.890000e-29 139.0
26 TraesCS6B01G064700 chr5D 87.532 393 38 9 3744 4132 192268699 192268314 1.110000e-120 444.0
27 TraesCS6B01G064700 chr5D 94.118 85 5 0 1666 1750 110444260 110444176 3.540000e-26 130.0
28 TraesCS6B01G064700 chr5D 86.957 115 7 5 1118 1229 58752104 58752213 5.930000e-24 122.0
29 TraesCS6B01G064700 chr2B 98.718 78 1 0 1673 1750 731020190 731020267 5.890000e-29 139.0
30 TraesCS6B01G064700 chr2B 87.500 112 6 5 1121 1229 87964768 87964662 5.930000e-24 122.0
31 TraesCS6B01G064700 chr1B 98.718 78 1 0 1673 1750 512688512 512688435 5.890000e-29 139.0
32 TraesCS6B01G064700 chr1B 86.777 121 14 2 1887 2007 499214892 499214774 2.740000e-27 134.0
33 TraesCS6B01G064700 chr3B 97.468 79 2 0 1672 1750 377869849 377869927 7.610000e-28 135.0
34 TraesCS6B01G064700 chr2A 94.186 86 3 1 1665 1750 435231547 435231630 3.540000e-26 130.0
35 TraesCS6B01G064700 chr7B 92.391 92 4 3 1660 1750 630179001 630178912 1.270000e-25 128.0
36 TraesCS6B01G064700 chr7B 86.957 115 7 5 1118 1229 743024931 743025040 5.930000e-24 122.0
37 TraesCS6B01G064700 chr2D 86.957 115 7 5 1118 1229 635058849 635058958 5.930000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G064700 chr6B 42810506 42814869 4363 False 8059.000000 8059 100.000000 1 4364 1 chr6B.!!$F1 4363
1 TraesCS6B01G064700 chr6A 24420043 24425167 5124 False 964.500000 1766 85.231250 87 4334 4 chr6A.!!$F2 4247
2 TraesCS6B01G064700 chrUn 93834691 93839197 4506 False 955.250000 1744 89.140750 87 4334 4 chrUn.!!$F2 4247
3 TraesCS6B01G064700 chr4D 419337473 419339856 2383 True 709.500000 1315 81.454500 920 3400 2 chr4D.!!$R1 2480
4 TraesCS6B01G064700 chr4B 517437538 517440180 2642 True 477.366667 1242 84.915333 517 3400 3 chr4B.!!$R1 2883
5 TraesCS6B01G064700 chr4A 45143892 45145320 1428 False 1090.000000 1090 80.802000 1887 3390 1 chr4A.!!$F1 1503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
80 81 0.034380 TGTTGGTTCCGGTGGTTTGA 60.034 50.0 0.00 0.0 0.00 2.69 F
84 85 0.035739 GGTTCCGGTGGTTTGAGCTA 59.964 55.0 0.00 0.0 0.00 3.32 F
1214 1451 0.104855 TGTAGCAGCCCAATAGCGAG 59.895 55.0 0.00 0.0 38.01 5.03 F
1230 1467 0.179127 CGAGCATCCGATGTGACACT 60.179 55.0 10.10 0.0 0.00 3.55 F
1527 2047 0.249741 TAAAGGCCGCCTTATCGCTC 60.250 55.0 25.09 0.0 43.92 5.03 F
2921 4316 0.102120 AGATTTCTCGCGCTCAGAGG 59.898 55.0 5.56 0.0 36.45 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1208 1445 0.030773 GTCACATCGGATGCTCGCTA 59.969 55.0 17.61 0.00 0.00 4.26 R
1218 1455 0.034756 TGGAACCAGTGTCACATCGG 59.965 55.0 5.62 5.22 0.00 4.18 R
2902 4276 0.102120 CCTCTGAGCGCGAGAAATCT 59.898 55.0 12.10 0.00 0.00 2.40 R
2906 4280 1.315981 ATGACCTCTGAGCGCGAGAA 61.316 55.0 12.10 0.00 0.00 2.87 R
3342 4903 1.576577 ACATCAGATCTGGTGAGGCA 58.423 50.0 36.78 11.48 44.18 4.75 R
3994 5570 0.178767 TGCCATGAGCTTACGATGCT 59.821 50.0 0.00 0.00 44.23 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.449635 TGTATGGATAAATGAAGTTGTGCC 57.550 37.500 0.00 0.00 0.00 5.01
24 25 6.186957 TGTATGGATAAATGAAGTTGTGCCT 58.813 36.000 0.00 0.00 0.00 4.75
25 26 6.663093 TGTATGGATAAATGAAGTTGTGCCTT 59.337 34.615 0.00 0.00 0.00 4.35
26 27 6.610075 ATGGATAAATGAAGTTGTGCCTTT 57.390 33.333 0.00 0.00 0.00 3.11
27 28 5.782047 TGGATAAATGAAGTTGTGCCTTTG 58.218 37.500 0.00 0.00 0.00 2.77
28 29 4.627035 GGATAAATGAAGTTGTGCCTTTGC 59.373 41.667 0.00 0.00 38.26 3.68
29 30 2.531522 AATGAAGTTGTGCCTTTGCC 57.468 45.000 0.00 0.00 36.33 4.52
30 31 0.681175 ATGAAGTTGTGCCTTTGCCC 59.319 50.000 0.00 0.00 36.33 5.36
31 32 0.396974 TGAAGTTGTGCCTTTGCCCT 60.397 50.000 0.00 0.00 36.33 5.19
32 33 0.752658 GAAGTTGTGCCTTTGCCCTT 59.247 50.000 0.00 0.00 36.33 3.95
33 34 1.138859 GAAGTTGTGCCTTTGCCCTTT 59.861 47.619 0.00 0.00 36.33 3.11
34 35 1.203237 AGTTGTGCCTTTGCCCTTTT 58.797 45.000 0.00 0.00 36.33 2.27
35 36 1.134431 AGTTGTGCCTTTGCCCTTTTG 60.134 47.619 0.00 0.00 36.33 2.44
36 37 0.908198 TTGTGCCTTTGCCCTTTTGT 59.092 45.000 0.00 0.00 36.33 2.83
37 38 0.908198 TGTGCCTTTGCCCTTTTGTT 59.092 45.000 0.00 0.00 36.33 2.83
38 39 1.280421 TGTGCCTTTGCCCTTTTGTTT 59.720 42.857 0.00 0.00 36.33 2.83
39 40 2.290577 TGTGCCTTTGCCCTTTTGTTTT 60.291 40.909 0.00 0.00 36.33 2.43
40 41 2.097304 GTGCCTTTGCCCTTTTGTTTTG 59.903 45.455 0.00 0.00 36.33 2.44
41 42 2.026822 TGCCTTTGCCCTTTTGTTTTGA 60.027 40.909 0.00 0.00 36.33 2.69
42 43 3.013219 GCCTTTGCCCTTTTGTTTTGAA 58.987 40.909 0.00 0.00 0.00 2.69
43 44 3.631686 GCCTTTGCCCTTTTGTTTTGAAT 59.368 39.130 0.00 0.00 0.00 2.57
44 45 4.819088 GCCTTTGCCCTTTTGTTTTGAATA 59.181 37.500 0.00 0.00 0.00 1.75
45 46 5.277779 GCCTTTGCCCTTTTGTTTTGAATAC 60.278 40.000 0.00 0.00 0.00 1.89
46 47 5.819901 CCTTTGCCCTTTTGTTTTGAATACA 59.180 36.000 0.00 0.00 0.00 2.29
47 48 6.486320 CCTTTGCCCTTTTGTTTTGAATACAT 59.514 34.615 0.00 0.00 0.00 2.29
48 49 7.307930 CCTTTGCCCTTTTGTTTTGAATACATC 60.308 37.037 0.00 0.00 0.00 3.06
49 50 5.546526 TGCCCTTTTGTTTTGAATACATCC 58.453 37.500 0.00 0.00 0.00 3.51
50 51 5.070981 TGCCCTTTTGTTTTGAATACATCCA 59.929 36.000 0.00 0.00 0.00 3.41
51 52 6.172630 GCCCTTTTGTTTTGAATACATCCAT 58.827 36.000 0.00 0.00 0.00 3.41
52 53 6.313658 GCCCTTTTGTTTTGAATACATCCATC 59.686 38.462 0.00 0.00 0.00 3.51
53 54 6.818142 CCCTTTTGTTTTGAATACATCCATCC 59.182 38.462 0.00 0.00 0.00 3.51
54 55 7.385267 CCTTTTGTTTTGAATACATCCATCCA 58.615 34.615 0.00 0.00 0.00 3.41
55 56 8.042515 CCTTTTGTTTTGAATACATCCATCCAT 58.957 33.333 0.00 0.00 0.00 3.41
56 57 9.090692 CTTTTGTTTTGAATACATCCATCCATC 57.909 33.333 0.00 0.00 0.00 3.51
57 58 6.713762 TGTTTTGAATACATCCATCCATCC 57.286 37.500 0.00 0.00 0.00 3.51
58 59 6.434302 TGTTTTGAATACATCCATCCATCCT 58.566 36.000 0.00 0.00 0.00 3.24
59 60 6.896860 TGTTTTGAATACATCCATCCATCCTT 59.103 34.615 0.00 0.00 0.00 3.36
60 61 6.964807 TTTGAATACATCCATCCATCCTTG 57.035 37.500 0.00 0.00 0.00 3.61
61 62 5.651612 TGAATACATCCATCCATCCTTGT 57.348 39.130 0.00 0.00 0.00 3.16
62 63 5.379187 TGAATACATCCATCCATCCTTGTG 58.621 41.667 0.00 0.00 0.00 3.33
63 64 5.103982 TGAATACATCCATCCATCCTTGTGT 60.104 40.000 0.00 0.00 0.00 3.72
64 65 3.744940 ACATCCATCCATCCTTGTGTT 57.255 42.857 0.00 0.00 0.00 3.32
65 66 3.359033 ACATCCATCCATCCTTGTGTTG 58.641 45.455 0.00 0.00 0.00 3.33
66 67 2.512692 TCCATCCATCCTTGTGTTGG 57.487 50.000 0.00 0.00 35.47 3.77
67 68 1.710244 TCCATCCATCCTTGTGTTGGT 59.290 47.619 0.00 0.00 35.62 3.67
68 69 2.109834 TCCATCCATCCTTGTGTTGGTT 59.890 45.455 0.00 0.00 35.62 3.67
69 70 2.493278 CCATCCATCCTTGTGTTGGTTC 59.507 50.000 0.00 0.00 35.62 3.62
70 71 2.286365 TCCATCCTTGTGTTGGTTCC 57.714 50.000 0.00 0.00 35.62 3.62
71 72 0.881118 CCATCCTTGTGTTGGTTCCG 59.119 55.000 0.00 0.00 0.00 4.30
72 73 0.881118 CATCCTTGTGTTGGTTCCGG 59.119 55.000 0.00 0.00 0.00 5.14
73 74 0.476771 ATCCTTGTGTTGGTTCCGGT 59.523 50.000 0.00 0.00 0.00 5.28
74 75 0.464735 TCCTTGTGTTGGTTCCGGTG 60.465 55.000 0.00 0.00 0.00 4.94
75 76 1.452145 CCTTGTGTTGGTTCCGGTGG 61.452 60.000 0.00 0.00 0.00 4.61
76 77 0.750182 CTTGTGTTGGTTCCGGTGGT 60.750 55.000 0.00 0.00 0.00 4.16
77 78 0.323542 TTGTGTTGGTTCCGGTGGTT 60.324 50.000 0.00 0.00 0.00 3.67
78 79 0.323542 TGTGTTGGTTCCGGTGGTTT 60.324 50.000 0.00 0.00 0.00 3.27
79 80 0.101579 GTGTTGGTTCCGGTGGTTTG 59.898 55.000 0.00 0.00 0.00 2.93
80 81 0.034380 TGTTGGTTCCGGTGGTTTGA 60.034 50.000 0.00 0.00 0.00 2.69
81 82 0.666374 GTTGGTTCCGGTGGTTTGAG 59.334 55.000 0.00 0.00 0.00 3.02
82 83 1.104577 TTGGTTCCGGTGGTTTGAGC 61.105 55.000 0.00 0.00 0.00 4.26
83 84 1.228154 GGTTCCGGTGGTTTGAGCT 60.228 57.895 0.00 0.00 0.00 4.09
84 85 0.035739 GGTTCCGGTGGTTTGAGCTA 59.964 55.000 0.00 0.00 0.00 3.32
85 86 1.154197 GTTCCGGTGGTTTGAGCTAC 58.846 55.000 0.00 0.00 0.00 3.58
126 130 7.173390 CCTCCTCTTTTAGTTAGTTTGGTCTTG 59.827 40.741 0.00 0.00 0.00 3.02
143 147 2.682856 TCTTGTCACAAGTTCAACCAGC 59.317 45.455 17.27 0.00 0.00 4.85
145 149 2.441410 TGTCACAAGTTCAACCAGCAA 58.559 42.857 0.00 0.00 0.00 3.91
156 160 5.362430 AGTTCAACCAGCAAAAATTACCTCA 59.638 36.000 0.00 0.00 0.00 3.86
157 161 6.041979 AGTTCAACCAGCAAAAATTACCTCAT 59.958 34.615 0.00 0.00 0.00 2.90
158 162 6.024552 TCAACCAGCAAAAATTACCTCATC 57.975 37.500 0.00 0.00 0.00 2.92
159 163 4.701956 ACCAGCAAAAATTACCTCATCG 57.298 40.909 0.00 0.00 0.00 3.84
200 207 0.598065 GTTGCTTCCATTCAACCGCT 59.402 50.000 0.00 0.00 37.26 5.52
202 209 2.192664 TGCTTCCATTCAACCGCTTA 57.807 45.000 0.00 0.00 0.00 3.09
203 210 2.509569 TGCTTCCATTCAACCGCTTAA 58.490 42.857 0.00 0.00 0.00 1.85
218 225 2.476821 GCTTAATTCCACATGCATGCC 58.523 47.619 26.53 0.00 0.00 4.40
219 226 2.159071 GCTTAATTCCACATGCATGCCA 60.159 45.455 26.53 7.66 0.00 4.92
220 227 3.493699 GCTTAATTCCACATGCATGCCAT 60.494 43.478 26.53 10.28 33.39 4.40
269 279 4.024977 CCCAATTGCTGCTTTGTTTTGTAC 60.025 41.667 0.00 0.00 0.00 2.90
280 290 9.329913 CTGCTTTGTTTTGTACTATATGAACAC 57.670 33.333 0.00 0.00 0.00 3.32
305 315 4.986034 CACCCAAGCATGCATATGTAATTG 59.014 41.667 21.98 12.39 36.65 2.32
306 316 4.650588 ACCCAAGCATGCATATGTAATTGT 59.349 37.500 21.98 4.97 36.65 2.71
307 317 5.832595 ACCCAAGCATGCATATGTAATTGTA 59.167 36.000 21.98 0.00 36.65 2.41
308 318 6.323482 ACCCAAGCATGCATATGTAATTGTAA 59.677 34.615 21.98 0.00 36.65 2.41
309 319 7.015487 ACCCAAGCATGCATATGTAATTGTAAT 59.985 33.333 21.98 0.00 36.65 1.89
310 320 7.329962 CCCAAGCATGCATATGTAATTGTAATG 59.670 37.037 21.98 0.44 36.65 1.90
324 334 3.266510 TGTAATGAAGCAGCAGGGTAG 57.733 47.619 0.00 0.00 0.00 3.18
329 339 1.001641 AAGCAGCAGGGTAGCCAAG 60.002 57.895 14.62 6.39 34.23 3.61
352 366 3.426292 GCTTAACGGTGGCATTTCTTCTC 60.426 47.826 0.00 0.00 0.00 2.87
353 367 2.568623 AACGGTGGCATTTCTTCTCT 57.431 45.000 0.00 0.00 0.00 3.10
396 431 2.191128 AGGAAGACCAGTGTTCATGC 57.809 50.000 9.56 0.00 38.94 4.06
407 442 2.624838 AGTGTTCATGCAAAACTGGAGG 59.375 45.455 14.27 0.00 0.00 4.30
426 461 5.945466 GAGGATACCTCGTTAGTTAGGAG 57.055 47.826 1.97 0.00 41.08 3.69
427 462 4.143543 AGGATACCTCGTTAGTTAGGAGC 58.856 47.826 0.00 0.00 37.42 4.70
428 463 3.887716 GGATACCTCGTTAGTTAGGAGCA 59.112 47.826 0.00 0.00 37.42 4.26
429 464 4.023021 GGATACCTCGTTAGTTAGGAGCAG 60.023 50.000 0.00 0.00 37.42 4.24
430 465 2.805194 ACCTCGTTAGTTAGGAGCAGT 58.195 47.619 0.00 0.00 37.42 4.40
431 466 3.960571 ACCTCGTTAGTTAGGAGCAGTA 58.039 45.455 0.00 0.00 37.42 2.74
432 467 3.693578 ACCTCGTTAGTTAGGAGCAGTAC 59.306 47.826 0.00 0.00 37.42 2.73
433 468 3.946558 CCTCGTTAGTTAGGAGCAGTACT 59.053 47.826 0.00 0.00 37.42 2.73
434 469 4.201930 CCTCGTTAGTTAGGAGCAGTACTG 60.202 50.000 18.93 18.93 37.42 2.74
435 470 4.330250 TCGTTAGTTAGGAGCAGTACTGT 58.670 43.478 23.44 10.82 0.00 3.55
436 471 4.763793 TCGTTAGTTAGGAGCAGTACTGTT 59.236 41.667 23.44 18.44 0.00 3.16
437 472 5.094134 CGTTAGTTAGGAGCAGTACTGTTC 58.906 45.833 26.49 26.49 39.64 3.18
438 473 5.335426 CGTTAGTTAGGAGCAGTACTGTTCA 60.335 44.000 32.38 16.46 41.72 3.18
439 474 6.625300 CGTTAGTTAGGAGCAGTACTGTTCAT 60.625 42.308 32.38 29.40 41.72 2.57
440 475 5.331876 AGTTAGGAGCAGTACTGTTCATC 57.668 43.478 32.38 20.26 41.72 2.92
441 476 5.020132 AGTTAGGAGCAGTACTGTTCATCT 58.980 41.667 32.38 24.75 41.72 2.90
442 477 3.883830 AGGAGCAGTACTGTTCATCTG 57.116 47.619 32.38 6.14 41.72 2.90
443 478 3.169099 AGGAGCAGTACTGTTCATCTGT 58.831 45.455 32.38 14.26 41.72 3.41
444 479 3.580458 AGGAGCAGTACTGTTCATCTGTT 59.420 43.478 32.38 13.46 41.72 3.16
445 480 3.929610 GGAGCAGTACTGTTCATCTGTTC 59.070 47.826 32.38 15.36 41.72 3.18
446 481 3.929610 GAGCAGTACTGTTCATCTGTTCC 59.070 47.826 28.62 7.56 40.03 3.62
447 482 3.324846 AGCAGTACTGTTCATCTGTTCCA 59.675 43.478 23.44 0.00 0.00 3.53
448 483 4.065088 GCAGTACTGTTCATCTGTTCCAA 58.935 43.478 23.44 0.00 0.00 3.53
449 484 4.153117 GCAGTACTGTTCATCTGTTCCAAG 59.847 45.833 23.44 0.00 0.00 3.61
450 485 5.300752 CAGTACTGTTCATCTGTTCCAAGT 58.699 41.667 15.06 0.00 0.00 3.16
451 486 5.760253 CAGTACTGTTCATCTGTTCCAAGTT 59.240 40.000 15.06 0.00 0.00 2.66
452 487 6.929049 CAGTACTGTTCATCTGTTCCAAGTTA 59.071 38.462 15.06 0.00 0.00 2.24
459 494 4.225942 TCATCTGTTCCAAGTTAGGAGCAT 59.774 41.667 9.93 0.00 45.94 3.79
477 512 2.225019 GCATAATCCATTCCAGTCGCTG 59.775 50.000 0.52 0.52 0.00 5.18
479 514 2.496899 AATCCATTCCAGTCGCTGTT 57.503 45.000 6.19 0.00 0.00 3.16
487 522 1.202592 TCCAGTCGCTGTTGCTAAACA 60.203 47.619 6.19 0.00 44.06 2.83
490 525 2.287915 CAGTCGCTGTTGCTAAACAAGT 59.712 45.455 0.00 0.00 45.50 3.16
494 529 3.872182 TCGCTGTTGCTAAACAAGTTACA 59.128 39.130 0.00 0.00 45.50 2.41
495 530 3.966218 CGCTGTTGCTAAACAAGTTACAC 59.034 43.478 0.00 0.00 45.50 2.90
513 548 6.485648 AGTTACACCCAACTCATCAAGTTTAC 59.514 38.462 0.00 0.00 46.26 2.01
564 602 3.553302 CCGTTTACCCACCAAAATGAACC 60.553 47.826 0.00 0.00 0.00 3.62
583 653 1.211457 CCTCCTTGGACTATGCAAGCT 59.789 52.381 4.68 0.00 43.32 3.74
596 666 0.179056 GCAAGCTAATCGTGGCCCTA 60.179 55.000 0.00 0.00 0.00 3.53
609 679 1.138859 TGGCCCTATCAGATGTTGACG 59.861 52.381 0.00 0.00 38.99 4.35
610 680 1.139058 GGCCCTATCAGATGTTGACGT 59.861 52.381 0.00 0.00 38.99 4.34
611 681 2.364324 GGCCCTATCAGATGTTGACGTA 59.636 50.000 0.00 0.00 38.99 3.57
612 682 3.381949 GCCCTATCAGATGTTGACGTAC 58.618 50.000 0.00 0.00 38.99 3.67
613 683 3.181479 GCCCTATCAGATGTTGACGTACA 60.181 47.826 0.00 0.00 38.99 2.90
614 684 4.360563 CCCTATCAGATGTTGACGTACAC 58.639 47.826 0.00 0.00 38.99 2.90
615 685 4.098044 CCCTATCAGATGTTGACGTACACT 59.902 45.833 0.00 0.00 38.99 3.55
686 766 4.095946 ACCAAATGTTGTGGGAGCATATT 58.904 39.130 0.00 0.00 40.75 1.28
701 781 4.298626 AGCATATTCTGGTCCAGGTTCTA 58.701 43.478 19.11 6.14 31.51 2.10
755 860 3.012518 GGCGTCTCCTAGTACAGTGTTA 58.987 50.000 0.00 0.00 0.00 2.41
814 919 5.475564 TGCATGCATGAAGCTCATATAATGT 59.524 36.000 30.64 0.00 45.94 2.71
815 920 6.015772 TGCATGCATGAAGCTCATATAATGTT 60.016 34.615 30.64 0.00 45.94 2.71
820 925 6.581542 GCATGAAGCTCATATAATGTTTCAGC 59.418 38.462 0.00 0.00 34.28 4.26
821 926 7.521748 GCATGAAGCTCATATAATGTTTCAGCT 60.522 37.037 0.00 0.00 34.28 4.24
822 927 7.255491 TGAAGCTCATATAATGTTTCAGCTG 57.745 36.000 7.63 7.63 35.91 4.24
823 928 6.261603 TGAAGCTCATATAATGTTTCAGCTGG 59.738 38.462 15.13 0.00 35.91 4.85
857 1024 1.633774 TCCCAAATTTGCCGGCTTTA 58.366 45.000 29.70 13.23 0.00 1.85
865 1032 0.109723 TTGCCGGCTTTACTTCCAGT 59.890 50.000 29.70 0.00 0.00 4.00
887 1063 7.042051 CCAGTATACCTATGTCGACAAAATTGG 60.042 40.741 24.13 18.16 0.00 3.16
915 1097 8.706492 AATTTTGATAGTTTGTATGCATGTGG 57.294 30.769 10.16 0.00 0.00 4.17
916 1098 5.833406 TTGATAGTTTGTATGCATGTGGG 57.167 39.130 10.16 0.00 0.00 4.61
975 1171 3.772636 CAGTGTCTGCATCGTCGG 58.227 61.111 0.00 0.00 0.00 4.79
996 1196 0.718343 CGCTCGCAGGAGAAAAGAAG 59.282 55.000 0.00 0.00 43.27 2.85
1077 1283 3.494626 CCAACGCATCAGGTATGTATGTC 59.505 47.826 0.00 0.00 37.93 3.06
1079 1285 3.982475 ACGCATCAGGTATGTATGTCAG 58.018 45.455 0.00 0.00 37.93 3.51
1080 1286 3.384789 ACGCATCAGGTATGTATGTCAGT 59.615 43.478 0.00 0.00 37.93 3.41
1081 1287 3.737774 CGCATCAGGTATGTATGTCAGTG 59.262 47.826 0.00 0.00 37.93 3.66
1082 1288 4.499696 CGCATCAGGTATGTATGTCAGTGA 60.500 45.833 0.00 0.00 37.93 3.41
1109 1320 1.774894 TAGGCCTGTGCTCCGGTTTT 61.775 55.000 17.99 0.00 37.74 2.43
1112 1323 0.321298 GCCTGTGCTCCGGTTTTAGA 60.321 55.000 0.00 0.00 33.53 2.10
1117 1328 4.504858 CTGTGCTCCGGTTTTAGAATAGT 58.495 43.478 0.00 0.00 0.00 2.12
1120 1331 4.933400 GTGCTCCGGTTTTAGAATAGTGAA 59.067 41.667 0.00 0.00 0.00 3.18
1133 1352 8.582657 TTAGAATAGTGAAGAGTTCAGCTAGT 57.417 34.615 0.00 0.00 41.01 2.57
1134 1353 7.095695 AGAATAGTGAAGAGTTCAGCTAGTC 57.904 40.000 13.13 13.13 41.01 2.59
1136 1355 2.490115 AGTGAAGAGTTCAGCTAGTCCG 59.510 50.000 0.00 0.00 41.01 4.79
1143 1362 2.685897 AGTTCAGCTAGTCCGAGTGATC 59.314 50.000 0.00 0.00 0.00 2.92
1144 1363 2.685897 GTTCAGCTAGTCCGAGTGATCT 59.314 50.000 0.00 0.00 0.00 2.75
1146 1365 1.336440 CAGCTAGTCCGAGTGATCTGG 59.664 57.143 0.00 0.00 0.00 3.86
1166 1385 2.353323 GGTTACCCCACGTTTCATCTC 58.647 52.381 0.00 0.00 0.00 2.75
1168 1387 3.000727 GTTACCCCACGTTTCATCTCTG 58.999 50.000 0.00 0.00 0.00 3.35
1170 1389 1.420138 ACCCCACGTTTCATCTCTGTT 59.580 47.619 0.00 0.00 0.00 3.16
1171 1390 2.158667 ACCCCACGTTTCATCTCTGTTT 60.159 45.455 0.00 0.00 0.00 2.83
1172 1391 2.484264 CCCCACGTTTCATCTCTGTTTC 59.516 50.000 0.00 0.00 0.00 2.78
1178 1415 6.414987 CCACGTTTCATCTCTGTTTCTTTTTC 59.585 38.462 0.00 0.00 0.00 2.29
1185 1422 9.613428 TTCATCTCTGTTTCTTTTTCTCAACTA 57.387 29.630 0.00 0.00 0.00 2.24
1202 1439 5.741011 TCAACTATAGGGGTTTTGTAGCAG 58.259 41.667 4.43 0.00 0.00 4.24
1208 1445 1.266178 GGGTTTTGTAGCAGCCCAAT 58.734 50.000 0.00 0.00 39.13 3.16
1211 1448 2.159240 GGTTTTGTAGCAGCCCAATAGC 60.159 50.000 0.00 0.00 0.00 2.97
1212 1449 1.378531 TTTGTAGCAGCCCAATAGCG 58.621 50.000 0.00 0.00 38.01 4.26
1213 1450 0.539518 TTGTAGCAGCCCAATAGCGA 59.460 50.000 0.00 0.00 38.01 4.93
1214 1451 0.104855 TGTAGCAGCCCAATAGCGAG 59.895 55.000 0.00 0.00 38.01 5.03
1216 1453 1.685355 TAGCAGCCCAATAGCGAGCA 61.685 55.000 0.00 0.00 39.92 4.26
1218 1455 1.849976 GCAGCCCAATAGCGAGCATC 61.850 60.000 0.00 0.00 38.18 3.91
1219 1456 1.072159 AGCCCAATAGCGAGCATCC 59.928 57.895 0.00 0.00 38.01 3.51
1220 1457 2.320587 GCCCAATAGCGAGCATCCG 61.321 63.158 0.00 0.00 0.00 4.18
1225 1462 1.458445 CAATAGCGAGCATCCGATGTG 59.542 52.381 10.10 2.30 0.00 3.21
1226 1463 0.961753 ATAGCGAGCATCCGATGTGA 59.038 50.000 10.10 0.00 0.00 3.58
1230 1467 0.179127 CGAGCATCCGATGTGACACT 60.179 55.000 10.10 0.00 0.00 3.55
1247 1488 1.734465 CACTGGTTCCATTCTCGCTTC 59.266 52.381 0.00 0.00 0.00 3.86
1256 1497 1.399791 CATTCTCGCTTCCCTTTCTGC 59.600 52.381 0.00 0.00 0.00 4.26
1292 1536 7.983307 AGATTCGTTACTTAACTCGACATACT 58.017 34.615 0.00 0.00 34.12 2.12
1303 1547 9.395707 CTTAACTCGACATACTACATACATTCC 57.604 37.037 0.00 0.00 0.00 3.01
1327 1576 2.831333 ACATAGAGCATCGCAGAAAGG 58.169 47.619 0.00 0.00 43.58 3.11
1333 1582 2.744202 GAGCATCGCAGAAAGGAAGAAA 59.256 45.455 0.00 0.00 43.58 2.52
1337 1586 4.572389 GCATCGCAGAAAGGAAGAAAGATA 59.428 41.667 0.00 0.00 43.58 1.98
1339 1588 4.184629 TCGCAGAAAGGAAGAAAGATAGC 58.815 43.478 0.00 0.00 0.00 2.97
1356 1721 2.250939 GCAAGTGTGCGGCAGTACA 61.251 57.895 16.60 3.27 41.93 2.90
1395 1834 2.606725 CGAGTCATAGGCAAAAGCAGAG 59.393 50.000 0.00 0.00 0.00 3.35
1411 1850 2.515057 AGGCAACACGCGTCCAAA 60.515 55.556 9.86 0.00 43.84 3.28
1412 1851 1.896660 AGGCAACACGCGTCCAAAT 60.897 52.632 9.86 0.00 43.84 2.32
1414 1853 1.001745 GGCAACACGCGTCCAAATTC 61.002 55.000 9.86 0.00 43.84 2.17
1416 1855 1.665735 GCAACACGCGTCCAAATTCAT 60.666 47.619 9.86 0.00 0.00 2.57
1417 1856 2.241722 CAACACGCGTCCAAATTCATC 58.758 47.619 9.86 0.00 0.00 2.92
1418 1857 0.442310 ACACGCGTCCAAATTCATCG 59.558 50.000 9.86 0.00 0.00 3.84
1423 1865 1.737793 GCGTCCAAATTCATCGGTTCT 59.262 47.619 0.00 0.00 0.00 3.01
1446 1899 2.996621 CTCTGGCCTCGTGTTTAAGAAG 59.003 50.000 3.32 0.00 0.00 2.85
1455 1908 5.179368 CCTCGTGTTTAAGAAGCTGAATGAA 59.821 40.000 0.00 0.00 0.00 2.57
1456 1909 6.128172 CCTCGTGTTTAAGAAGCTGAATGAAT 60.128 38.462 0.00 0.00 0.00 2.57
1457 1910 6.831769 TCGTGTTTAAGAAGCTGAATGAATC 58.168 36.000 0.00 0.00 0.00 2.52
1458 1911 6.426633 TCGTGTTTAAGAAGCTGAATGAATCA 59.573 34.615 0.00 0.00 36.38 2.57
1459 1912 7.119699 TCGTGTTTAAGAAGCTGAATGAATCAT 59.880 33.333 0.00 0.00 37.44 2.45
1460 1913 8.390354 CGTGTTTAAGAAGCTGAATGAATCATA 58.610 33.333 0.00 0.00 37.44 2.15
1473 1926 5.801531 ATGAATCATACGCCTACCTAACA 57.198 39.130 0.00 0.00 0.00 2.41
1479 1932 5.597806 TCATACGCCTACCTAACATTCTTG 58.402 41.667 0.00 0.00 0.00 3.02
1481 1934 4.755266 ACGCCTACCTAACATTCTTGAT 57.245 40.909 0.00 0.00 0.00 2.57
1483 1936 4.161565 ACGCCTACCTAACATTCTTGATCA 59.838 41.667 0.00 0.00 0.00 2.92
1484 1937 5.116180 CGCCTACCTAACATTCTTGATCAA 58.884 41.667 8.12 8.12 0.00 2.57
1485 1938 5.006746 CGCCTACCTAACATTCTTGATCAAC 59.993 44.000 3.38 0.00 0.00 3.18
1494 2014 6.867662 ACATTCTTGATCAACGTTTCTCTT 57.132 33.333 3.38 0.00 0.00 2.85
1495 2015 7.962964 ACATTCTTGATCAACGTTTCTCTTA 57.037 32.000 3.38 0.00 0.00 2.10
1496 2016 8.023050 ACATTCTTGATCAACGTTTCTCTTAG 57.977 34.615 3.38 1.37 0.00 2.18
1524 2044 1.531149 CATGTAAAGGCCGCCTTATCG 59.469 52.381 25.09 8.58 43.92 2.92
1525 2045 0.812412 TGTAAAGGCCGCCTTATCGC 60.812 55.000 25.09 14.80 43.92 4.58
1526 2046 0.532196 GTAAAGGCCGCCTTATCGCT 60.532 55.000 25.09 11.57 43.92 4.93
1527 2047 0.249741 TAAAGGCCGCCTTATCGCTC 60.250 55.000 25.09 0.00 43.92 5.03
1528 2048 3.792053 AAGGCCGCCTTATCGCTCG 62.792 63.158 23.67 0.00 42.74 5.03
1530 2050 2.585247 GCCGCCTTATCGCTCGTT 60.585 61.111 0.00 0.00 0.00 3.85
1531 2051 2.586773 GCCGCCTTATCGCTCGTTC 61.587 63.158 0.00 0.00 0.00 3.95
1532 2052 1.949631 CCGCCTTATCGCTCGTTCC 60.950 63.158 0.00 0.00 0.00 3.62
1533 2053 1.065928 CGCCTTATCGCTCGTTCCT 59.934 57.895 0.00 0.00 0.00 3.36
1546 2066 3.187700 CTCGTTCCTTTCCATACCTTCG 58.812 50.000 0.00 0.00 0.00 3.79
1547 2067 2.827322 TCGTTCCTTTCCATACCTTCGA 59.173 45.455 0.00 0.00 0.00 3.71
1548 2068 3.449737 TCGTTCCTTTCCATACCTTCGAT 59.550 43.478 0.00 0.00 0.00 3.59
1549 2069 4.081309 TCGTTCCTTTCCATACCTTCGATT 60.081 41.667 0.00 0.00 0.00 3.34
1550 2070 5.127519 TCGTTCCTTTCCATACCTTCGATTA 59.872 40.000 0.00 0.00 0.00 1.75
1552 2072 6.145696 CGTTCCTTTCCATACCTTCGATTATC 59.854 42.308 0.00 0.00 0.00 1.75
1553 2073 6.110411 TCCTTTCCATACCTTCGATTATCC 57.890 41.667 0.00 0.00 0.00 2.59
1556 2080 6.770785 CCTTTCCATACCTTCGATTATCCAAA 59.229 38.462 0.00 0.00 0.00 3.28
1577 2106 6.697019 CCAAATATAAAATTCGCCACTCAAGG 59.303 38.462 0.00 0.00 0.00 3.61
1580 2109 2.270352 AAATTCGCCACTCAAGGACA 57.730 45.000 0.00 0.00 0.00 4.02
1581 2110 2.496899 AATTCGCCACTCAAGGACAT 57.503 45.000 0.00 0.00 0.00 3.06
1613 2142 1.527844 CCCTGAAGCTAGCCATGCC 60.528 63.158 12.13 0.00 0.00 4.40
1614 2143 1.527844 CCTGAAGCTAGCCATGCCC 60.528 63.158 12.13 0.00 0.00 5.36
1615 2144 1.225426 CTGAAGCTAGCCATGCCCA 59.775 57.895 12.13 0.00 0.00 5.36
1616 2145 0.818445 CTGAAGCTAGCCATGCCCAG 60.818 60.000 12.13 6.20 0.00 4.45
1617 2146 1.527844 GAAGCTAGCCATGCCCAGG 60.528 63.158 12.13 0.00 0.00 4.45
1618 2147 2.276309 GAAGCTAGCCATGCCCAGGT 62.276 60.000 12.13 0.00 0.00 4.00
1619 2148 2.203266 GCTAGCCATGCCCAGGTC 60.203 66.667 2.29 0.00 0.00 3.85
1651 2591 3.189287 TGCTGCAGCTAGTAAAAAGAAGC 59.811 43.478 36.61 8.36 42.66 3.86
1654 2594 5.613358 TGCAGCTAGTAAAAAGAAGCTTC 57.387 39.130 19.11 19.11 42.52 3.86
1658 2598 6.597614 CAGCTAGTAAAAAGAAGCTTCAGTG 58.402 40.000 27.57 10.49 42.52 3.66
1661 2601 7.118971 AGCTAGTAAAAAGAAGCTTCAGTGATG 59.881 37.037 27.57 10.23 42.52 3.07
1662 2602 7.118390 GCTAGTAAAAAGAAGCTTCAGTGATGA 59.882 37.037 27.57 6.31 32.18 2.92
1663 2603 7.992754 AGTAAAAAGAAGCTTCAGTGATGAT 57.007 32.000 27.57 1.82 0.00 2.45
1665 2605 6.889301 AAAAAGAAGCTTCAGTGATGATGA 57.111 33.333 27.57 0.00 0.00 2.92
1667 2607 6.438259 AAAGAAGCTTCAGTGATGATGATG 57.562 37.500 27.57 0.00 0.00 3.07
1668 2608 5.100344 AGAAGCTTCAGTGATGATGATGT 57.900 39.130 27.57 0.00 0.00 3.06
1670 2610 3.542648 AGCTTCAGTGATGATGATGTGG 58.457 45.455 10.08 0.00 0.00 4.17
1671 2611 3.054582 AGCTTCAGTGATGATGATGTGGT 60.055 43.478 10.08 0.00 0.00 4.16
1672 2612 3.311871 GCTTCAGTGATGATGATGTGGTC 59.688 47.826 10.08 0.00 0.00 4.02
1673 2613 4.510571 CTTCAGTGATGATGATGTGGTCA 58.489 43.478 0.00 0.00 42.06 4.02
1674 2614 4.556592 TCAGTGATGATGATGTGGTCAA 57.443 40.909 0.00 0.00 40.97 3.18
1675 2615 4.256110 TCAGTGATGATGATGTGGTCAAC 58.744 43.478 0.00 0.00 40.97 3.18
1677 2617 4.456566 CAGTGATGATGATGTGGTCAACAA 59.543 41.667 0.00 0.00 42.05 2.83
1678 2618 4.456911 AGTGATGATGATGTGGTCAACAAC 59.543 41.667 0.00 0.00 42.05 3.32
1679 2619 4.216042 GTGATGATGATGTGGTCAACAACA 59.784 41.667 0.00 0.00 44.62 3.33
1680 2620 4.826183 TGATGATGATGTGGTCAACAACAA 59.174 37.500 0.00 0.00 43.84 2.83
1681 2621 4.566545 TGATGATGTGGTCAACAACAAC 57.433 40.909 0.00 0.00 43.84 3.32
1683 2623 4.400567 TGATGATGTGGTCAACAACAACAA 59.599 37.500 4.92 0.00 45.02 2.83
1684 2624 4.790765 TGATGTGGTCAACAACAACAAA 57.209 36.364 0.00 0.00 45.02 2.83
1685 2625 5.139435 TGATGTGGTCAACAACAACAAAA 57.861 34.783 0.00 0.00 45.02 2.44
1686 2626 5.541845 TGATGTGGTCAACAACAACAAAAA 58.458 33.333 0.00 0.00 45.02 1.94
1704 2644 2.675658 AAAGCCTTTAGTCCCAAGCA 57.324 45.000 0.00 0.00 0.00 3.91
1705 2645 2.675658 AAGCCTTTAGTCCCAAGCAA 57.324 45.000 0.00 0.00 0.00 3.91
1706 2646 2.206576 AGCCTTTAGTCCCAAGCAAG 57.793 50.000 0.00 0.00 0.00 4.01
1707 2647 1.425448 AGCCTTTAGTCCCAAGCAAGT 59.575 47.619 0.00 0.00 0.00 3.16
1709 2649 2.029918 GCCTTTAGTCCCAAGCAAGTTG 60.030 50.000 0.00 0.00 35.71 3.16
1717 2876 2.267045 CAAGCAAGTTGGGGTAGGC 58.733 57.895 4.75 0.00 31.82 3.93
1724 2883 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
1725 2884 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
1727 2886 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
1728 2887 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
1729 2888 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
1746 2905 4.857037 GTGAAACCCATAAAATCTCGCAAC 59.143 41.667 0.00 0.00 0.00 4.17
1749 2908 3.426615 ACCCATAAAATCTCGCAACCAA 58.573 40.909 0.00 0.00 0.00 3.67
1750 2909 3.829601 ACCCATAAAATCTCGCAACCAAA 59.170 39.130 0.00 0.00 0.00 3.28
1787 3047 8.307483 TGTGGTCAAACAAGAAAATTCTTTACA 58.693 29.630 5.68 0.82 44.70 2.41
1788 3048 8.592155 GTGGTCAAACAAGAAAATTCTTTACAC 58.408 33.333 5.68 4.80 44.70 2.90
1793 3053 9.833894 CAAACAAGAAAATTCTTTACACAATCG 57.166 29.630 5.68 0.00 44.70 3.34
1794 3054 7.623268 ACAAGAAAATTCTTTACACAATCGC 57.377 32.000 5.68 0.00 44.70 4.58
1798 3058 5.376854 AAATTCTTTACACAATCGCTGCT 57.623 34.783 0.00 0.00 0.00 4.24
1807 3067 0.723414 CAATCGCTGCTACACACTGG 59.277 55.000 0.00 0.00 0.00 4.00
1811 3071 1.871772 GCTGCTACACACTGGCAAG 59.128 57.895 0.00 0.00 35.49 4.01
1842 3120 5.820131 TCAAATTTACCGTCATGCATGATC 58.180 37.500 30.89 21.88 39.30 2.92
1864 3148 1.614824 AGGCACTTCTCTGGGGGAG 60.615 63.158 0.00 0.00 43.12 4.30
2122 3451 1.304547 CCTGTCGTCTGTCTCCCCT 60.305 63.158 0.00 0.00 0.00 4.79
2129 3461 2.122729 CTGTCTCCCCTGGGGACA 59.877 66.667 31.05 25.59 46.17 4.02
2205 3537 4.595538 ACTCAACGGCCGCGTCAA 62.596 61.111 28.58 5.51 0.00 3.18
2325 3657 3.764466 CCTCCTCAAGGCTCGCGT 61.764 66.667 5.77 0.00 38.67 6.01
2329 3661 2.811317 CTCAAGGCTCGCGTGTCC 60.811 66.667 9.44 10.89 0.00 4.02
2344 3676 2.123854 TCCGAGGCCGCTGTAGAT 60.124 61.111 4.53 0.00 0.00 1.98
2353 3685 1.589993 CGCTGTAGATGACGCCAGG 60.590 63.158 0.00 0.00 0.00 4.45
2368 3700 1.511305 CAGGGTCAGCGACGTGTAT 59.489 57.895 0.00 0.00 32.65 2.29
2379 3711 1.705337 GACGTGTATGCCGCAATGCT 61.705 55.000 2.94 0.00 0.00 3.79
2422 3754 1.591703 GGTGATCACCGCTCAGTCA 59.408 57.895 28.52 0.00 42.29 3.41
2767 4115 2.237393 CTGATCCCAGTAAGCAGAGC 57.763 55.000 0.00 0.00 35.70 4.09
2768 4116 1.483827 CTGATCCCAGTAAGCAGAGCA 59.516 52.381 0.00 0.00 35.70 4.26
2769 4117 1.208052 TGATCCCAGTAAGCAGAGCAC 59.792 52.381 0.00 0.00 0.00 4.40
2781 4129 1.002033 GCAGAGCACCAACAAGAACAG 60.002 52.381 0.00 0.00 0.00 3.16
2807 4155 3.058016 CGATGCACAACCTTCTTGTCATT 60.058 43.478 0.00 0.00 0.00 2.57
2832 4194 2.037641 CACCATGGATCGCCTCTGATTA 59.962 50.000 21.47 0.00 34.31 1.75
2907 4281 5.382618 GTGAGCACCATTTCTCAAGATTT 57.617 39.130 0.00 0.00 40.57 2.17
2912 4307 4.656041 CACCATTTCTCAAGATTTCTCGC 58.344 43.478 0.00 0.00 0.00 5.03
2917 4312 1.202348 TCTCAAGATTTCTCGCGCTCA 59.798 47.619 5.56 0.00 0.00 4.26
2921 4316 0.102120 AGATTTCTCGCGCTCAGAGG 59.898 55.000 5.56 0.00 36.45 3.69
2941 4336 5.704515 AGAGGTCATTTCACAAATCTGACAG 59.295 40.000 0.00 0.00 29.88 3.51
3003 4402 3.288308 CTCCAACTCGAGCGTGCCT 62.288 63.158 13.61 0.00 0.00 4.75
3084 4606 1.905843 CTCGAGCCCTCCATCCGAT 60.906 63.158 0.00 0.00 0.00 4.18
3183 4723 2.346365 GGTCCCCCGTCTGTGTTC 59.654 66.667 0.00 0.00 0.00 3.18
3184 4724 2.048503 GTCCCCCGTCTGTGTTCG 60.049 66.667 0.00 0.00 0.00 3.95
3185 4725 3.307906 TCCCCCGTCTGTGTTCGG 61.308 66.667 0.00 0.00 45.42 4.30
3187 4727 4.308458 CCCCGTCTGTGTTCGGCA 62.308 66.667 0.00 0.00 44.63 5.69
3188 4728 2.738521 CCCGTCTGTGTTCGGCAG 60.739 66.667 0.00 0.00 44.63 4.85
3189 4729 3.414700 CCGTCTGTGTTCGGCAGC 61.415 66.667 0.00 0.00 40.28 5.25
3190 4730 3.414700 CGTCTGTGTTCGGCAGCC 61.415 66.667 0.00 0.00 34.21 4.85
3191 4731 3.050275 GTCTGTGTTCGGCAGCCC 61.050 66.667 5.63 0.00 34.21 5.19
3342 4903 1.757682 TTGTTCTTGCCGTCCTTTGT 58.242 45.000 0.00 0.00 0.00 2.83
3345 4906 1.452145 TTCTTGCCGTCCTTTGTGCC 61.452 55.000 0.00 0.00 0.00 5.01
3373 4934 7.767659 CACCAGATCTGATGTAAATTCTCTGAA 59.232 37.037 24.62 0.00 32.55 3.02
3390 4951 7.870509 TCTCTGAATGTGAATTTGGATTAGG 57.129 36.000 0.00 0.00 0.00 2.69
3475 5036 8.273780 AGATGTCAGATTCAATGTTTAGGAAC 57.726 34.615 0.00 0.00 36.29 3.62
3558 5128 0.460311 CCTGGGTAGTTAGCCTGACG 59.540 60.000 13.73 0.00 43.00 4.35
3655 5231 1.860078 CAACTTCTGAACCGACCGC 59.140 57.895 0.00 0.00 0.00 5.68
3701 5277 5.292589 GTCAACTTTCAGAGTTCAAACCGTA 59.707 40.000 0.00 0.00 45.40 4.02
3715 5291 0.683504 ACCGTATCTCCAGCGTCCTT 60.684 55.000 0.00 0.00 0.00 3.36
3717 5293 1.679680 CCGTATCTCCAGCGTCCTTTA 59.320 52.381 0.00 0.00 0.00 1.85
3727 5303 0.175073 GCGTCCTTTAGATGGTCGGT 59.825 55.000 0.00 0.00 36.81 4.69
3734 5310 3.118738 CCTTTAGATGGTCGGTAGCAACT 60.119 47.826 0.00 0.00 39.30 3.16
3768 5344 6.575162 AACAAAAGTGTTATAAGGAGCTGG 57.425 37.500 0.00 0.00 46.33 4.85
3875 5451 6.879458 AGGACATATTCTTAGAACCAACACAC 59.121 38.462 0.00 0.00 0.00 3.82
3913 5489 5.808042 AAGCATGTCTACAGTATTGCTTG 57.192 39.130 16.71 0.00 39.49 4.01
3922 5498 1.131126 CAGTATTGCTTGCCAACCTCG 59.869 52.381 0.00 0.00 35.99 4.63
3975 5551 9.273016 CAAGTGAAAGAATCAACTAAGGAGTTA 57.727 33.333 0.00 0.00 44.39 2.24
3988 5564 8.836413 CAACTAAGGAGTTAATGAAAGTGACAA 58.164 33.333 0.00 0.00 44.39 3.18
3990 5566 9.574516 ACTAAGGAGTTAATGAAAGTGACAATT 57.425 29.630 0.00 0.00 28.61 2.32
4000 5576 7.801547 ATGAAAGTGACAATTAAAAGCATCG 57.198 32.000 0.00 0.00 0.00 3.84
4001 5577 6.734137 TGAAAGTGACAATTAAAAGCATCGT 58.266 32.000 0.00 0.00 0.00 3.73
4002 5578 7.866729 TGAAAGTGACAATTAAAAGCATCGTA 58.133 30.769 0.00 0.00 0.00 3.43
4003 5579 8.346300 TGAAAGTGACAATTAAAAGCATCGTAA 58.654 29.630 0.00 0.00 0.00 3.18
4004 5580 8.728088 AAAGTGACAATTAAAAGCATCGTAAG 57.272 30.769 0.00 0.00 0.00 2.34
4005 5581 6.314784 AGTGACAATTAAAAGCATCGTAAGC 58.685 36.000 0.00 0.00 37.18 3.09
4006 5582 6.149474 AGTGACAATTAAAAGCATCGTAAGCT 59.851 34.615 0.00 0.00 45.97 3.74
4007 5583 6.466097 GTGACAATTAAAAGCATCGTAAGCTC 59.534 38.462 0.00 0.00 42.53 4.09
4008 5584 6.148645 TGACAATTAAAAGCATCGTAAGCTCA 59.851 34.615 0.00 0.00 42.53 4.26
4009 5585 7.088589 ACAATTAAAAGCATCGTAAGCTCAT 57.911 32.000 0.00 0.00 42.53 2.90
4010 5586 6.968904 ACAATTAAAAGCATCGTAAGCTCATG 59.031 34.615 0.00 0.00 42.53 3.07
4045 5621 3.056821 GTCCAAACAAAATGGCCCTAGAC 60.057 47.826 0.00 0.00 37.88 2.59
4102 5678 3.996150 ATTACATGCTAATGGTGCAGC 57.004 42.857 9.47 9.47 44.04 5.25
4114 5690 8.805175 TGCTAATGGTGCAGCATATTAATTTAT 58.195 29.630 30.10 14.46 42.68 1.40
4201 5779 9.133627 GACTAAAAGAGAATGAAAATTGGAAGC 57.866 33.333 0.00 0.00 0.00 3.86
4256 5834 8.623903 TCTGATAATCACAAGAATTTGTATGCC 58.376 33.333 0.00 0.00 45.53 4.40
4262 6003 4.616802 CACAAGAATTTGTATGCCGAACAC 59.383 41.667 0.00 0.00 45.53 3.32
4269 6010 1.299541 GTATGCCGAACACCAGGATG 58.700 55.000 0.00 0.00 0.00 3.51
4310 6051 4.718940 ACTGGAGTGAAACAAAACTTGG 57.281 40.909 0.00 0.00 41.43 3.61
4312 6053 4.526650 ACTGGAGTGAAACAAAACTTGGTT 59.473 37.500 0.00 0.00 44.75 3.67
4335 6076 6.909550 TTGGTTCTATGCCAAACAAATAGT 57.090 33.333 0.00 0.00 42.39 2.12
4336 6077 6.909550 TGGTTCTATGCCAAACAAATAGTT 57.090 33.333 0.00 0.00 43.89 2.24
4337 6078 6.919721 TGGTTCTATGCCAAACAAATAGTTC 58.080 36.000 0.00 0.00 40.26 3.01
4338 6079 6.071616 TGGTTCTATGCCAAACAAATAGTTCC 60.072 38.462 0.00 0.00 40.26 3.62
4339 6080 6.152831 GGTTCTATGCCAAACAAATAGTTCCT 59.847 38.462 0.00 0.00 40.26 3.36
4340 6081 7.309805 GGTTCTATGCCAAACAAATAGTTCCTT 60.310 37.037 0.00 0.00 40.26 3.36
4341 6082 7.775053 TCTATGCCAAACAAATAGTTCCTTT 57.225 32.000 0.00 0.00 40.26 3.11
4342 6083 8.189119 TCTATGCCAAACAAATAGTTCCTTTT 57.811 30.769 0.00 0.00 40.26 2.27
4343 6084 8.646900 TCTATGCCAAACAAATAGTTCCTTTTT 58.353 29.630 0.00 0.00 40.26 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.186957 AGGCACAACTTCATTTATCCATACA 58.813 36.000 0.00 0.00 0.00 2.29
1 2 6.699575 AGGCACAACTTCATTTATCCATAC 57.300 37.500 0.00 0.00 0.00 2.39
2 3 7.546358 CAAAGGCACAACTTCATTTATCCATA 58.454 34.615 0.00 0.00 0.00 2.74
3 4 6.400568 CAAAGGCACAACTTCATTTATCCAT 58.599 36.000 0.00 0.00 0.00 3.41
4 5 5.782047 CAAAGGCACAACTTCATTTATCCA 58.218 37.500 0.00 0.00 0.00 3.41
5 6 4.627035 GCAAAGGCACAACTTCATTTATCC 59.373 41.667 0.00 0.00 40.72 2.59
6 7 4.627035 GGCAAAGGCACAACTTCATTTATC 59.373 41.667 0.00 0.00 43.71 1.75
7 8 4.563374 GGGCAAAGGCACAACTTCATTTAT 60.563 41.667 0.00 0.00 45.12 1.40
8 9 3.244044 GGGCAAAGGCACAACTTCATTTA 60.244 43.478 0.00 0.00 45.12 1.40
9 10 2.485302 GGGCAAAGGCACAACTTCATTT 60.485 45.455 0.00 0.00 45.12 2.32
10 11 1.070601 GGGCAAAGGCACAACTTCATT 59.929 47.619 0.00 0.00 45.12 2.57
11 12 0.681175 GGGCAAAGGCACAACTTCAT 59.319 50.000 0.00 0.00 45.12 2.57
12 13 2.123409 GGGCAAAGGCACAACTTCA 58.877 52.632 0.00 0.00 45.12 3.02
19 20 2.036958 AAACAAAAGGGCAAAGGCAC 57.963 45.000 0.00 0.00 46.58 5.01
20 21 2.026822 TCAAAACAAAAGGGCAAAGGCA 60.027 40.909 0.00 0.00 43.71 4.75
21 22 2.637947 TCAAAACAAAAGGGCAAAGGC 58.362 42.857 0.00 0.00 40.13 4.35
22 23 5.819901 TGTATTCAAAACAAAAGGGCAAAGG 59.180 36.000 0.00 0.00 0.00 3.11
23 24 6.917217 TGTATTCAAAACAAAAGGGCAAAG 57.083 33.333 0.00 0.00 0.00 2.77
24 25 6.484977 GGATGTATTCAAAACAAAAGGGCAAA 59.515 34.615 0.00 0.00 0.00 3.68
25 26 5.994668 GGATGTATTCAAAACAAAAGGGCAA 59.005 36.000 0.00 0.00 0.00 4.52
26 27 5.070981 TGGATGTATTCAAAACAAAAGGGCA 59.929 36.000 0.00 0.00 0.00 5.36
27 28 5.546526 TGGATGTATTCAAAACAAAAGGGC 58.453 37.500 0.00 0.00 0.00 5.19
28 29 6.818142 GGATGGATGTATTCAAAACAAAAGGG 59.182 38.462 0.00 0.00 0.00 3.95
29 30 7.385267 TGGATGGATGTATTCAAAACAAAAGG 58.615 34.615 0.00 0.00 0.00 3.11
30 31 9.090692 GATGGATGGATGTATTCAAAACAAAAG 57.909 33.333 0.00 0.00 0.00 2.27
31 32 8.040132 GGATGGATGGATGTATTCAAAACAAAA 58.960 33.333 0.00 0.00 0.00 2.44
32 33 7.399765 AGGATGGATGGATGTATTCAAAACAAA 59.600 33.333 0.00 0.00 0.00 2.83
33 34 6.896860 AGGATGGATGGATGTATTCAAAACAA 59.103 34.615 0.00 0.00 0.00 2.83
34 35 6.434302 AGGATGGATGGATGTATTCAAAACA 58.566 36.000 0.00 0.00 0.00 2.83
35 36 6.966534 AGGATGGATGGATGTATTCAAAAC 57.033 37.500 0.00 0.00 0.00 2.43
36 37 6.896860 ACAAGGATGGATGGATGTATTCAAAA 59.103 34.615 0.00 0.00 0.00 2.44
37 38 6.321945 CACAAGGATGGATGGATGTATTCAAA 59.678 38.462 0.00 0.00 0.00 2.69
38 39 5.829391 CACAAGGATGGATGGATGTATTCAA 59.171 40.000 0.00 0.00 0.00 2.69
39 40 5.103982 ACACAAGGATGGATGGATGTATTCA 60.104 40.000 0.00 0.00 0.00 2.57
40 41 5.380043 ACACAAGGATGGATGGATGTATTC 58.620 41.667 0.00 0.00 0.00 1.75
41 42 5.393068 ACACAAGGATGGATGGATGTATT 57.607 39.130 0.00 0.00 0.00 1.89
42 43 5.135383 CAACACAAGGATGGATGGATGTAT 58.865 41.667 0.00 0.00 0.00 2.29
43 44 4.525996 CAACACAAGGATGGATGGATGTA 58.474 43.478 0.00 0.00 0.00 2.29
44 45 3.359033 CAACACAAGGATGGATGGATGT 58.641 45.455 0.00 0.00 0.00 3.06
45 46 2.691526 CCAACACAAGGATGGATGGATG 59.308 50.000 0.00 0.00 36.27 3.51
46 47 2.312741 ACCAACACAAGGATGGATGGAT 59.687 45.455 0.00 0.00 37.66 3.41
47 48 1.710244 ACCAACACAAGGATGGATGGA 59.290 47.619 0.00 0.00 37.66 3.41
48 49 2.220653 ACCAACACAAGGATGGATGG 57.779 50.000 0.00 0.00 37.66 3.51
49 50 2.493278 GGAACCAACACAAGGATGGATG 59.507 50.000 0.00 0.00 37.66 3.51
50 51 2.807676 GGAACCAACACAAGGATGGAT 58.192 47.619 0.00 0.00 37.66 3.41
51 52 1.544537 CGGAACCAACACAAGGATGGA 60.545 52.381 0.00 0.00 37.66 3.41
52 53 0.881118 CGGAACCAACACAAGGATGG 59.119 55.000 0.00 0.00 40.16 3.51
53 54 0.881118 CCGGAACCAACACAAGGATG 59.119 55.000 0.00 0.00 0.00 3.51
54 55 0.476771 ACCGGAACCAACACAAGGAT 59.523 50.000 9.46 0.00 0.00 3.24
55 56 0.464735 CACCGGAACCAACACAAGGA 60.465 55.000 9.46 0.00 0.00 3.36
56 57 1.452145 CCACCGGAACCAACACAAGG 61.452 60.000 9.46 0.00 0.00 3.61
57 58 0.750182 ACCACCGGAACCAACACAAG 60.750 55.000 9.46 0.00 0.00 3.16
58 59 0.323542 AACCACCGGAACCAACACAA 60.324 50.000 9.46 0.00 0.00 3.33
59 60 0.323542 AAACCACCGGAACCAACACA 60.324 50.000 9.46 0.00 0.00 3.72
60 61 0.101579 CAAACCACCGGAACCAACAC 59.898 55.000 9.46 0.00 0.00 3.32
61 62 0.034380 TCAAACCACCGGAACCAACA 60.034 50.000 9.46 0.00 0.00 3.33
62 63 0.666374 CTCAAACCACCGGAACCAAC 59.334 55.000 9.46 0.00 0.00 3.77
63 64 1.104577 GCTCAAACCACCGGAACCAA 61.105 55.000 9.46 0.00 0.00 3.67
64 65 1.527380 GCTCAAACCACCGGAACCA 60.527 57.895 9.46 0.00 0.00 3.67
65 66 0.035739 TAGCTCAAACCACCGGAACC 59.964 55.000 9.46 0.00 0.00 3.62
66 67 1.154197 GTAGCTCAAACCACCGGAAC 58.846 55.000 9.46 0.00 0.00 3.62
67 68 0.320073 CGTAGCTCAAACCACCGGAA 60.320 55.000 9.46 0.00 0.00 4.30
68 69 1.180456 TCGTAGCTCAAACCACCGGA 61.180 55.000 9.46 0.00 0.00 5.14
69 70 1.012486 GTCGTAGCTCAAACCACCGG 61.012 60.000 0.00 0.00 0.00 5.28
70 71 0.038526 AGTCGTAGCTCAAACCACCG 60.039 55.000 0.00 0.00 0.00 4.94
71 72 1.000506 TCAGTCGTAGCTCAAACCACC 59.999 52.381 0.00 0.00 0.00 4.61
72 73 2.433868 TCAGTCGTAGCTCAAACCAC 57.566 50.000 0.00 0.00 0.00 4.16
73 74 3.585862 GAATCAGTCGTAGCTCAAACCA 58.414 45.455 0.00 0.00 0.00 3.67
74 75 2.930682 GGAATCAGTCGTAGCTCAAACC 59.069 50.000 0.00 0.00 0.00 3.27
75 76 3.851098 AGGAATCAGTCGTAGCTCAAAC 58.149 45.455 0.00 0.00 0.00 2.93
76 77 3.764434 AGAGGAATCAGTCGTAGCTCAAA 59.236 43.478 0.00 0.00 0.00 2.69
77 78 3.357203 AGAGGAATCAGTCGTAGCTCAA 58.643 45.455 0.00 0.00 0.00 3.02
78 79 3.006112 AGAGGAATCAGTCGTAGCTCA 57.994 47.619 0.00 0.00 0.00 4.26
79 80 3.243267 GGAAGAGGAATCAGTCGTAGCTC 60.243 52.174 0.00 0.00 0.00 4.09
80 81 2.691011 GGAAGAGGAATCAGTCGTAGCT 59.309 50.000 0.00 0.00 0.00 3.32
81 82 2.691011 AGGAAGAGGAATCAGTCGTAGC 59.309 50.000 0.00 0.00 0.00 3.58
82 83 3.316868 GGAGGAAGAGGAATCAGTCGTAG 59.683 52.174 0.00 0.00 0.00 3.51
83 84 3.053544 AGGAGGAAGAGGAATCAGTCGTA 60.054 47.826 0.00 0.00 0.00 3.43
84 85 2.104170 GGAGGAAGAGGAATCAGTCGT 58.896 52.381 0.00 0.00 0.00 4.34
85 86 2.360801 GAGGAGGAAGAGGAATCAGTCG 59.639 54.545 0.00 0.00 0.00 4.18
126 130 3.502191 TTTGCTGGTTGAACTTGTGAC 57.498 42.857 0.00 0.00 0.00 3.67
143 147 4.035091 TGCCGATCGATGAGGTAATTTTTG 59.965 41.667 18.66 0.00 0.00 2.44
145 149 3.804036 TGCCGATCGATGAGGTAATTTT 58.196 40.909 18.66 0.00 0.00 1.82
200 207 4.061357 CATGGCATGCATGTGGAATTAA 57.939 40.909 26.79 5.56 0.00 1.40
202 209 2.613026 CATGGCATGCATGTGGAATT 57.387 45.000 26.79 4.92 0.00 2.17
232 239 5.522460 CAGCAATTGGGCATTCTAATCTTTG 59.478 40.000 7.72 0.00 35.83 2.77
250 257 8.739039 TCATATAGTACAAAACAAAGCAGCAAT 58.261 29.630 0.00 0.00 0.00 3.56
269 279 3.214328 GCTTGGGTGGGTGTTCATATAG 58.786 50.000 0.00 0.00 0.00 1.31
280 290 0.677288 CATATGCATGCTTGGGTGGG 59.323 55.000 20.33 0.00 0.00 4.61
305 315 1.943340 GCTACCCTGCTGCTTCATTAC 59.057 52.381 0.00 0.00 0.00 1.89
306 316 1.134098 GGCTACCCTGCTGCTTCATTA 60.134 52.381 0.00 0.00 0.00 1.90
307 317 0.394899 GGCTACCCTGCTGCTTCATT 60.395 55.000 0.00 0.00 0.00 2.57
308 318 1.225704 GGCTACCCTGCTGCTTCAT 59.774 57.895 0.00 0.00 0.00 2.57
309 319 1.778017 TTGGCTACCCTGCTGCTTCA 61.778 55.000 0.00 0.00 0.00 3.02
310 320 1.002134 TTGGCTACCCTGCTGCTTC 60.002 57.895 0.00 0.00 0.00 3.86
324 334 2.989881 GCCACCGTTAAGCCTTGGC 61.990 63.158 2.97 2.97 45.64 4.52
329 339 1.173913 AGAAATGCCACCGTTAAGCC 58.826 50.000 0.00 0.00 0.00 4.35
338 348 3.614092 TCCATGAGAGAAGAAATGCCAC 58.386 45.455 0.00 0.00 0.00 5.01
339 349 3.882444 CTCCATGAGAGAAGAAATGCCA 58.118 45.455 0.00 0.00 46.50 4.92
340 350 2.617774 GCTCCATGAGAGAAGAAATGCC 59.382 50.000 13.48 0.00 46.50 4.40
407 442 4.579753 ACTGCTCCTAACTAACGAGGTATC 59.420 45.833 0.00 0.00 34.20 2.24
414 449 4.698583 ACAGTACTGCTCCTAACTAACG 57.301 45.455 22.90 0.00 0.00 3.18
423 458 3.601443 ACAGATGAACAGTACTGCTCC 57.399 47.619 22.90 12.09 34.25 4.70
424 459 3.929610 GGAACAGATGAACAGTACTGCTC 59.070 47.826 22.90 20.05 34.25 4.26
425 460 3.324846 TGGAACAGATGAACAGTACTGCT 59.675 43.478 22.90 11.10 34.25 4.24
426 461 3.664107 TGGAACAGATGAACAGTACTGC 58.336 45.455 22.90 8.13 34.25 4.40
427 462 5.300752 ACTTGGAACAGATGAACAGTACTG 58.699 41.667 21.44 21.44 42.39 2.74
428 463 5.552870 ACTTGGAACAGATGAACAGTACT 57.447 39.130 0.00 0.00 42.39 2.73
429 464 6.369065 CCTAACTTGGAACAGATGAACAGTAC 59.631 42.308 0.00 0.00 42.39 2.73
430 465 6.269077 TCCTAACTTGGAACAGATGAACAGTA 59.731 38.462 0.00 0.00 42.39 2.74
431 466 5.071788 TCCTAACTTGGAACAGATGAACAGT 59.928 40.000 0.00 0.00 42.39 3.55
432 467 5.551233 TCCTAACTTGGAACAGATGAACAG 58.449 41.667 0.00 0.00 42.39 3.16
433 468 5.551233 CTCCTAACTTGGAACAGATGAACA 58.449 41.667 0.00 0.00 42.39 3.18
434 469 4.393371 GCTCCTAACTTGGAACAGATGAAC 59.607 45.833 0.00 0.00 42.39 3.18
435 470 4.041567 TGCTCCTAACTTGGAACAGATGAA 59.958 41.667 0.00 0.00 42.39 2.57
436 471 3.582647 TGCTCCTAACTTGGAACAGATGA 59.417 43.478 0.00 0.00 42.39 2.92
437 472 3.942829 TGCTCCTAACTTGGAACAGATG 58.057 45.455 0.00 0.00 42.39 2.90
438 473 4.851639 ATGCTCCTAACTTGGAACAGAT 57.148 40.909 0.00 0.00 42.39 2.90
439 474 5.755409 TTATGCTCCTAACTTGGAACAGA 57.245 39.130 0.00 0.00 42.39 3.41
440 475 5.529060 GGATTATGCTCCTAACTTGGAACAG 59.471 44.000 0.00 0.00 35.90 3.16
441 476 5.045213 TGGATTATGCTCCTAACTTGGAACA 60.045 40.000 0.00 0.00 36.74 3.18
442 477 5.437060 TGGATTATGCTCCTAACTTGGAAC 58.563 41.667 0.00 0.00 36.20 3.62
443 478 5.708736 TGGATTATGCTCCTAACTTGGAA 57.291 39.130 0.00 0.00 36.20 3.53
444 479 5.912149 ATGGATTATGCTCCTAACTTGGA 57.088 39.130 0.00 0.00 36.20 3.53
445 480 5.474876 GGAATGGATTATGCTCCTAACTTGG 59.525 44.000 0.00 0.00 36.20 3.61
446 481 6.064060 TGGAATGGATTATGCTCCTAACTTG 58.936 40.000 0.00 0.00 36.20 3.16
447 482 6.126361 ACTGGAATGGATTATGCTCCTAACTT 60.126 38.462 0.00 0.00 36.20 2.66
448 483 5.370880 ACTGGAATGGATTATGCTCCTAACT 59.629 40.000 0.00 0.00 36.20 2.24
449 484 5.625150 ACTGGAATGGATTATGCTCCTAAC 58.375 41.667 0.00 0.00 36.20 2.34
450 485 5.511373 CGACTGGAATGGATTATGCTCCTAA 60.511 44.000 0.00 0.00 36.20 2.69
451 486 4.021104 CGACTGGAATGGATTATGCTCCTA 60.021 45.833 0.00 0.00 36.20 2.94
452 487 3.244353 CGACTGGAATGGATTATGCTCCT 60.244 47.826 0.00 0.00 36.20 3.69
459 494 3.270027 CAACAGCGACTGGAATGGATTA 58.730 45.455 10.80 0.00 35.51 1.75
477 512 4.904253 TGGGTGTAACTTGTTTAGCAAC 57.096 40.909 0.00 0.00 36.74 4.17
479 514 4.528920 AGTTGGGTGTAACTTGTTTAGCA 58.471 39.130 0.00 0.00 37.62 3.49
487 522 5.048846 ACTTGATGAGTTGGGTGTAACTT 57.951 39.130 0.00 0.00 40.78 2.66
510 545 8.746530 CCTAACACTATCCTAACAAGTGAGTAA 58.253 37.037 8.57 0.00 42.59 2.24
513 548 7.036220 CACCTAACACTATCCTAACAAGTGAG 58.964 42.308 8.57 0.00 42.59 3.51
564 602 2.706339 AGCTTGCATAGTCCAAGGAG 57.294 50.000 0.00 0.00 39.95 3.69
583 653 3.239449 ACATCTGATAGGGCCACGATTA 58.761 45.455 6.18 0.00 0.00 1.75
596 666 3.679980 GCAAGTGTACGTCAACATCTGAT 59.320 43.478 0.00 0.00 36.14 2.90
609 679 3.364964 CGATTCAACCAAGGCAAGTGTAC 60.365 47.826 0.00 0.00 0.00 2.90
610 680 2.811431 CGATTCAACCAAGGCAAGTGTA 59.189 45.455 0.00 0.00 0.00 2.90
611 681 1.608590 CGATTCAACCAAGGCAAGTGT 59.391 47.619 0.00 0.00 0.00 3.55
612 682 1.068333 CCGATTCAACCAAGGCAAGTG 60.068 52.381 0.00 0.00 0.00 3.16
613 683 1.247567 CCGATTCAACCAAGGCAAGT 58.752 50.000 0.00 0.00 0.00 3.16
614 684 1.247567 ACCGATTCAACCAAGGCAAG 58.752 50.000 0.00 0.00 0.00 4.01
615 685 1.339610 CAACCGATTCAACCAAGGCAA 59.660 47.619 0.00 0.00 0.00 4.52
686 766 1.353358 TCGAGTAGAACCTGGACCAGA 59.647 52.381 23.77 0.00 32.44 3.86
701 781 8.983307 ACGAAGAAGAAAATAGTTAATCGAGT 57.017 30.769 0.00 0.00 0.00 4.18
755 860 1.077501 CAGATGGCCGGTCACCAAT 60.078 57.895 13.07 0.00 41.49 3.16
822 927 1.766496 TGGGATCGGTTGGAATAGTCC 59.234 52.381 1.18 1.18 45.21 3.85
823 928 3.553828 TTGGGATCGGTTGGAATAGTC 57.446 47.619 0.00 0.00 0.00 2.59
865 1032 9.451002 TTTTCCAATTTTGTCGACATAGGTATA 57.549 29.630 20.80 0.00 0.00 1.47
915 1097 4.394300 GGCAGCACATGTCAGAATATATCC 59.606 45.833 0.00 0.00 32.08 2.59
916 1098 5.243981 AGGCAGCACATGTCAGAATATATC 58.756 41.667 0.00 0.00 35.29 1.63
975 1171 0.388649 TCTTTTCTCCTGCGAGCGAC 60.389 55.000 0.00 0.00 35.94 5.19
996 1196 1.257415 CATCTCTCGCGCAACATTCTC 59.743 52.381 8.75 0.00 0.00 2.87
1077 1283 2.027745 ACAGGCCTAATCACAGTCACTG 60.028 50.000 3.98 2.22 37.52 3.66
1079 1285 2.350522 CACAGGCCTAATCACAGTCAC 58.649 52.381 3.98 0.00 0.00 3.67
1080 1286 1.339055 GCACAGGCCTAATCACAGTCA 60.339 52.381 3.98 0.00 0.00 3.41
1081 1287 1.065854 AGCACAGGCCTAATCACAGTC 60.066 52.381 3.98 0.00 42.56 3.51
1082 1288 0.987294 AGCACAGGCCTAATCACAGT 59.013 50.000 3.98 0.00 42.56 3.55
1109 1320 7.283580 GGACTAGCTGAACTCTTCACTATTCTA 59.716 40.741 0.00 0.00 35.46 2.10
1112 1323 5.163602 CGGACTAGCTGAACTCTTCACTATT 60.164 44.000 0.00 0.00 35.46 1.73
1117 1328 2.750166 CTCGGACTAGCTGAACTCTTCA 59.250 50.000 0.00 0.00 38.17 3.02
1120 1331 2.088423 CACTCGGACTAGCTGAACTCT 58.912 52.381 0.00 0.00 0.00 3.24
1133 1352 1.481871 GGTAACCCAGATCACTCGGA 58.518 55.000 0.00 0.00 0.00 4.55
1154 1373 7.189512 AGAAAAAGAAACAGAGATGAAACGTG 58.810 34.615 0.00 0.00 0.00 4.49
1158 1377 8.960591 AGTTGAGAAAAAGAAACAGAGATGAAA 58.039 29.630 0.00 0.00 0.00 2.69
1163 1382 9.712305 CCTATAGTTGAGAAAAAGAAACAGAGA 57.288 33.333 0.00 0.00 0.00 3.10
1166 1385 7.665974 ACCCCTATAGTTGAGAAAAAGAAACAG 59.334 37.037 0.00 0.00 0.00 3.16
1168 1387 7.997773 ACCCCTATAGTTGAGAAAAAGAAAC 57.002 36.000 0.00 0.00 0.00 2.78
1170 1389 8.856103 CAAAACCCCTATAGTTGAGAAAAAGAA 58.144 33.333 0.00 0.00 0.00 2.52
1171 1390 8.002459 ACAAAACCCCTATAGTTGAGAAAAAGA 58.998 33.333 6.95 0.00 0.00 2.52
1172 1391 8.178313 ACAAAACCCCTATAGTTGAGAAAAAG 57.822 34.615 6.95 0.00 0.00 2.27
1178 1415 5.741011 TGCTACAAAACCCCTATAGTTGAG 58.259 41.667 6.95 2.81 0.00 3.02
1185 1422 1.063942 GGGCTGCTACAAAACCCCTAT 60.064 52.381 0.00 0.00 34.23 2.57
1202 1439 2.320587 CGGATGCTCGCTATTGGGC 61.321 63.158 0.00 0.00 0.00 5.36
1208 1445 0.030773 GTCACATCGGATGCTCGCTA 59.969 55.000 17.61 0.00 0.00 4.26
1211 1448 0.179127 AGTGTCACATCGGATGCTCG 60.179 55.000 17.61 7.05 0.00 5.03
1212 1449 1.284657 CAGTGTCACATCGGATGCTC 58.715 55.000 17.61 8.87 0.00 4.26
1213 1450 0.107993 CCAGTGTCACATCGGATGCT 60.108 55.000 17.61 3.75 0.00 3.79
1214 1451 0.391661 ACCAGTGTCACATCGGATGC 60.392 55.000 17.61 2.74 0.00 3.91
1216 1453 1.066143 GGAACCAGTGTCACATCGGAT 60.066 52.381 5.62 0.00 0.00 4.18
1218 1455 0.034756 TGGAACCAGTGTCACATCGG 59.965 55.000 5.62 5.22 0.00 4.18
1219 1456 2.099141 ATGGAACCAGTGTCACATCG 57.901 50.000 5.62 0.00 0.00 3.84
1220 1457 3.679389 AGAATGGAACCAGTGTCACATC 58.321 45.455 5.62 0.00 0.00 3.06
1225 1462 1.079503 GCGAGAATGGAACCAGTGTC 58.920 55.000 8.09 8.09 32.23 3.67
1226 1463 0.687354 AGCGAGAATGGAACCAGTGT 59.313 50.000 0.00 0.00 0.00 3.55
1230 1467 0.035439 GGGAAGCGAGAATGGAACCA 60.035 55.000 0.00 0.00 0.00 3.67
1262 1503 6.966066 GTCGAGTTAAGTAACGAATCTAGCTT 59.034 38.462 0.00 0.00 40.96 3.74
1292 1536 5.771165 TGCTCTATGTACGGGAATGTATGTA 59.229 40.000 0.00 0.00 0.00 2.29
1303 1547 1.266989 TCTGCGATGCTCTATGTACGG 59.733 52.381 0.00 0.00 0.00 4.02
1339 1588 0.660488 TTTGTACTGCCGCACACTTG 59.340 50.000 0.00 0.00 0.00 3.16
1348 1713 4.665833 AAAAAGTCCCTTTTGTACTGCC 57.334 40.909 2.95 0.00 41.98 4.85
1373 1741 2.233676 TCTGCTTTTGCCTATGACTCGA 59.766 45.455 0.00 0.00 46.87 4.04
1374 1742 2.606725 CTCTGCTTTTGCCTATGACTCG 59.393 50.000 0.00 0.00 46.87 4.18
1376 1744 2.943199 GCCTCTGCTTTTGCCTATGACT 60.943 50.000 0.00 0.00 46.87 3.41
1378 1746 1.004628 TGCCTCTGCTTTTGCCTATGA 59.995 47.619 0.00 0.00 46.87 2.15
1381 1819 1.247567 GTTGCCTCTGCTTTTGCCTA 58.752 50.000 0.00 0.00 46.87 3.93
1395 1834 1.001745 GAATTTGGACGCGTGTTGCC 61.002 55.000 20.70 12.94 42.08 4.52
1410 1849 2.636830 CCAGAGCAGAACCGATGAATT 58.363 47.619 0.00 0.00 0.00 2.17
1411 1850 1.745141 GCCAGAGCAGAACCGATGAAT 60.745 52.381 0.00 0.00 39.53 2.57
1412 1851 0.391661 GCCAGAGCAGAACCGATGAA 60.392 55.000 0.00 0.00 39.53 2.57
1414 1853 1.817099 GGCCAGAGCAGAACCGATG 60.817 63.158 0.00 0.00 42.56 3.84
1416 1855 2.604686 AGGCCAGAGCAGAACCGA 60.605 61.111 5.01 0.00 42.56 4.69
1417 1856 2.125350 GAGGCCAGAGCAGAACCG 60.125 66.667 5.01 0.00 42.56 4.44
1418 1857 2.125350 CGAGGCCAGAGCAGAACC 60.125 66.667 5.01 0.00 42.56 3.62
1423 1865 0.394938 TTAAACACGAGGCCAGAGCA 59.605 50.000 5.01 0.00 42.56 4.26
1446 1899 3.433615 GGTAGGCGTATGATTCATTCAGC 59.566 47.826 4.14 8.06 37.89 4.26
1455 1908 6.041637 TCAAGAATGTTAGGTAGGCGTATGAT 59.958 38.462 0.00 0.00 0.00 2.45
1456 1909 5.361571 TCAAGAATGTTAGGTAGGCGTATGA 59.638 40.000 0.00 0.00 0.00 2.15
1457 1910 5.597806 TCAAGAATGTTAGGTAGGCGTATG 58.402 41.667 0.00 0.00 0.00 2.39
1458 1911 5.864418 TCAAGAATGTTAGGTAGGCGTAT 57.136 39.130 0.00 0.00 0.00 3.06
1459 1912 5.361571 TGATCAAGAATGTTAGGTAGGCGTA 59.638 40.000 0.00 0.00 0.00 4.42
1460 1913 4.161565 TGATCAAGAATGTTAGGTAGGCGT 59.838 41.667 0.00 0.00 0.00 5.68
1473 1926 8.608844 AACTAAGAGAAACGTTGATCAAGAAT 57.391 30.769 8.80 0.00 0.00 2.40
1479 1932 7.064064 GTGTCAAACTAAGAGAAACGTTGATC 58.936 38.462 0.00 2.94 0.00 2.92
1481 1934 5.870433 TGTGTCAAACTAAGAGAAACGTTGA 59.130 36.000 0.00 0.00 0.00 3.18
1483 1936 6.315393 ACATGTGTCAAACTAAGAGAAACGTT 59.685 34.615 0.00 0.00 0.00 3.99
1484 1937 5.815740 ACATGTGTCAAACTAAGAGAAACGT 59.184 36.000 0.00 0.00 0.00 3.99
1485 1938 6.287107 ACATGTGTCAAACTAAGAGAAACG 57.713 37.500 0.00 0.00 0.00 3.60
1494 2014 3.749088 CGGCCTTTACATGTGTCAAACTA 59.251 43.478 9.11 0.00 0.00 2.24
1495 2015 2.552315 CGGCCTTTACATGTGTCAAACT 59.448 45.455 9.11 0.00 0.00 2.66
1496 2016 2.920647 GCGGCCTTTACATGTGTCAAAC 60.921 50.000 9.11 0.00 0.00 2.93
1524 2044 2.693267 AGGTATGGAAAGGAACGAGC 57.307 50.000 0.00 0.00 0.00 5.03
1525 2045 3.119245 TCGAAGGTATGGAAAGGAACGAG 60.119 47.826 0.00 0.00 0.00 4.18
1526 2046 2.827322 TCGAAGGTATGGAAAGGAACGA 59.173 45.455 0.00 0.00 0.00 3.85
1527 2047 3.241067 TCGAAGGTATGGAAAGGAACG 57.759 47.619 0.00 0.00 0.00 3.95
1528 2048 6.427242 GGATAATCGAAGGTATGGAAAGGAAC 59.573 42.308 0.00 0.00 0.00 3.62
1530 2050 5.605069 TGGATAATCGAAGGTATGGAAAGGA 59.395 40.000 0.00 0.00 0.00 3.36
1531 2051 5.865085 TGGATAATCGAAGGTATGGAAAGG 58.135 41.667 0.00 0.00 0.00 3.11
1532 2052 7.801716 TTTGGATAATCGAAGGTATGGAAAG 57.198 36.000 0.00 0.00 0.00 2.62
1548 2068 9.126151 TGAGTGGCGAATTTTATATTTGGATAA 57.874 29.630 0.00 0.00 0.00 1.75
1549 2069 8.684386 TGAGTGGCGAATTTTATATTTGGATA 57.316 30.769 0.00 0.00 0.00 2.59
1550 2070 7.581213 TGAGTGGCGAATTTTATATTTGGAT 57.419 32.000 0.00 0.00 0.00 3.41
1552 2072 6.697019 CCTTGAGTGGCGAATTTTATATTTGG 59.303 38.462 0.00 0.00 0.00 3.28
1553 2073 7.432252 GTCCTTGAGTGGCGAATTTTATATTTG 59.568 37.037 0.00 0.00 0.00 2.32
1556 2080 6.119536 TGTCCTTGAGTGGCGAATTTTATAT 58.880 36.000 0.00 0.00 0.00 0.86
1561 2085 2.270352 TGTCCTTGAGTGGCGAATTT 57.730 45.000 0.00 0.00 0.00 1.82
1566 2090 2.002586 CTGTTATGTCCTTGAGTGGCG 58.997 52.381 0.00 0.00 0.00 5.69
1577 2106 4.220821 TCAGGGTTCAGAGTCTGTTATGTC 59.779 45.833 19.53 6.48 32.61 3.06
1580 2109 4.323104 GCTTCAGGGTTCAGAGTCTGTTAT 60.323 45.833 19.53 0.74 32.61 1.89
1581 2110 3.006967 GCTTCAGGGTTCAGAGTCTGTTA 59.993 47.826 19.53 6.81 32.61 2.41
1614 2143 1.376543 CAGCATTACAGCCAGACCTG 58.623 55.000 0.00 0.00 38.78 4.00
1615 2144 0.393537 GCAGCATTACAGCCAGACCT 60.394 55.000 0.00 0.00 34.23 3.85
1616 2145 0.677731 TGCAGCATTACAGCCAGACC 60.678 55.000 0.00 0.00 34.23 3.85
1617 2146 0.731417 CTGCAGCATTACAGCCAGAC 59.269 55.000 0.00 0.00 34.23 3.51
1618 2147 3.164026 CTGCAGCATTACAGCCAGA 57.836 52.632 0.00 0.00 34.23 3.86
1642 2171 6.889301 TCATCATCACTGAAGCTTCTTTTT 57.111 33.333 26.09 6.00 34.37 1.94
1651 2591 4.510571 TGACCACATCATCATCACTGAAG 58.489 43.478 0.00 0.00 34.37 3.02
1654 2594 4.004982 TGTTGACCACATCATCATCACTG 58.995 43.478 0.00 0.00 37.11 3.66
1658 2598 5.156355 GTTGTTGTTGACCACATCATCATC 58.844 41.667 0.00 0.00 36.99 2.92
1661 2601 4.566545 TGTTGTTGTTGACCACATCATC 57.433 40.909 0.00 0.00 37.11 2.92
1662 2602 4.998671 TTGTTGTTGTTGACCACATCAT 57.001 36.364 1.49 0.00 37.11 2.45
1663 2603 4.790765 TTTGTTGTTGTTGACCACATCA 57.209 36.364 0.00 0.00 34.29 3.07
1683 2623 3.304829 TGCTTGGGACTAAAGGCTTTTT 58.695 40.909 18.93 5.62 0.00 1.94
1684 2624 2.957474 TGCTTGGGACTAAAGGCTTTT 58.043 42.857 18.93 0.00 0.00 2.27
1685 2625 2.675658 TGCTTGGGACTAAAGGCTTT 57.324 45.000 17.76 17.76 0.00 3.51
1686 2626 2.158460 ACTTGCTTGGGACTAAAGGCTT 60.158 45.455 0.00 0.00 0.00 4.35
1687 2627 1.425448 ACTTGCTTGGGACTAAAGGCT 59.575 47.619 0.00 0.00 0.00 4.58
1688 2628 1.911057 ACTTGCTTGGGACTAAAGGC 58.089 50.000 0.00 0.00 0.00 4.35
1689 2629 2.558359 CCAACTTGCTTGGGACTAAAGG 59.442 50.000 0.00 0.00 45.46 3.11
1690 2630 3.923017 CCAACTTGCTTGGGACTAAAG 57.077 47.619 0.00 0.00 45.46 1.85
1699 2639 0.251341 AGCCTACCCCAACTTGCTTG 60.251 55.000 0.00 0.00 0.00 4.01
1701 2641 0.912486 CTAGCCTACCCCAACTTGCT 59.088 55.000 0.00 0.00 0.00 3.91
1703 2643 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
1704 2644 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
1705 2645 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
1706 2646 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
1707 2647 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
1709 2649 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
1714 2873 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
1717 2876 6.480320 CGAGATTTTATGGGTTTCACCTCTAG 59.520 42.308 0.00 0.00 38.64 2.43
1724 2883 4.082463 GGTTGCGAGATTTTATGGGTTTCA 60.082 41.667 0.00 0.00 0.00 2.69
1725 2884 4.082463 TGGTTGCGAGATTTTATGGGTTTC 60.082 41.667 0.00 0.00 0.00 2.78
1727 2886 3.426615 TGGTTGCGAGATTTTATGGGTT 58.573 40.909 0.00 0.00 0.00 4.11
1728 2887 3.080300 TGGTTGCGAGATTTTATGGGT 57.920 42.857 0.00 0.00 0.00 4.51
1729 2888 4.082245 ACTTTGGTTGCGAGATTTTATGGG 60.082 41.667 0.00 0.00 0.00 4.00
1730 2889 4.858692 CACTTTGGTTGCGAGATTTTATGG 59.141 41.667 0.00 0.00 0.00 2.74
1732 2891 5.957842 TCACTTTGGTTGCGAGATTTTAT 57.042 34.783 0.00 0.00 0.00 1.40
1733 2892 5.471797 TCATCACTTTGGTTGCGAGATTTTA 59.528 36.000 0.00 0.00 0.00 1.52
1735 2894 3.820467 TCATCACTTTGGTTGCGAGATTT 59.180 39.130 0.00 0.00 0.00 2.17
1736 2895 3.411446 TCATCACTTTGGTTGCGAGATT 58.589 40.909 0.00 0.00 0.00 2.40
1737 2896 3.057969 TCATCACTTTGGTTGCGAGAT 57.942 42.857 0.00 0.00 0.00 2.75
1738 2897 2.542020 TCATCACTTTGGTTGCGAGA 57.458 45.000 0.00 0.00 0.00 4.04
1739 2898 2.743664 TCATCATCACTTTGGTTGCGAG 59.256 45.455 0.00 0.00 0.00 5.03
1741 2900 3.119743 ACATCATCATCACTTTGGTTGCG 60.120 43.478 0.00 0.00 0.00 4.85
1742 2901 4.171005 CACATCATCATCACTTTGGTTGC 58.829 43.478 0.00 0.00 0.00 4.17
1743 2902 4.219070 ACCACATCATCATCACTTTGGTTG 59.781 41.667 0.00 0.00 31.99 3.77
1746 2905 4.011698 TGACCACATCATCATCACTTTGG 58.988 43.478 0.00 0.00 29.99 3.28
1749 2908 5.072055 TGTTTGACCACATCATCATCACTT 58.928 37.500 0.00 0.00 37.11 3.16
1750 2909 4.654915 TGTTTGACCACATCATCATCACT 58.345 39.130 0.00 0.00 37.11 3.41
1787 3047 1.432514 CAGTGTGTAGCAGCGATTGT 58.567 50.000 0.00 0.00 0.00 2.71
1788 3048 0.723414 CCAGTGTGTAGCAGCGATTG 59.277 55.000 0.00 0.00 0.00 2.67
1793 3053 1.871772 CTTGCCAGTGTGTAGCAGC 59.128 57.895 0.00 0.00 37.89 5.25
1794 3054 0.886043 TGCTTGCCAGTGTGTAGCAG 60.886 55.000 6.28 0.00 36.96 4.24
1798 3058 0.467804 TCAGTGCTTGCCAGTGTGTA 59.532 50.000 0.00 0.00 43.84 2.90
1807 3067 4.229876 GGTAAATTTGAGTCAGTGCTTGC 58.770 43.478 0.00 0.00 0.00 4.01
1811 3071 3.496884 TGACGGTAAATTTGAGTCAGTGC 59.503 43.478 16.11 0.00 36.98 4.40
1842 3120 2.435586 CCAGAGAAGTGCCTGCCG 60.436 66.667 0.00 0.00 0.00 5.69
1864 3148 0.815734 TCGAAGGGAGGATCGTGTTC 59.184 55.000 0.00 0.00 39.91 3.18
1962 3291 1.561542 GGATGGTGACCATGACCTCTT 59.438 52.381 23.89 0.00 45.26 2.85
2061 3390 2.120909 GTGATCATGGTTGCCGGGG 61.121 63.158 2.18 0.00 0.00 5.73
2068 3397 1.019278 GGACGTGCGTGATCATGGTT 61.019 55.000 16.59 0.00 0.00 3.67
2122 3451 2.682494 GAGTAGGCGGTGTCCCCA 60.682 66.667 0.00 0.00 0.00 4.96
2129 3461 3.450115 GACCAGCGAGTAGGCGGT 61.450 66.667 0.00 0.00 43.48 5.68
2325 3657 3.449227 CTACAGCGGCCTCGGACA 61.449 66.667 0.00 0.00 36.79 4.02
2329 3661 1.299468 GTCATCTACAGCGGCCTCG 60.299 63.158 0.00 0.00 39.81 4.63
2338 3670 0.613572 TGACCCTGGCGTCATCTACA 60.614 55.000 12.23 0.00 37.85 2.74
2340 3672 1.676678 GCTGACCCTGGCGTCATCTA 61.677 60.000 15.37 0.00 41.78 1.98
2353 3685 2.165301 GGCATACACGTCGCTGACC 61.165 63.158 0.00 0.00 0.00 4.02
2405 3737 0.528017 TCTGACTGAGCGGTGATCAC 59.472 55.000 17.91 17.91 0.00 3.06
2411 3743 2.347322 GCTCCTCTGACTGAGCGGT 61.347 63.158 8.24 0.00 43.94 5.68
2416 3748 0.962855 CACCGAGCTCCTCTGACTGA 60.963 60.000 8.47 0.00 0.00 3.41
2417 3749 1.510383 CACCGAGCTCCTCTGACTG 59.490 63.158 8.47 0.00 0.00 3.51
2765 4113 2.097466 CGAAACTGTTCTTGTTGGTGCT 59.903 45.455 0.00 0.00 0.00 4.40
2766 4114 2.096819 TCGAAACTGTTCTTGTTGGTGC 59.903 45.455 0.00 0.00 0.00 5.01
2767 4115 4.282068 CATCGAAACTGTTCTTGTTGGTG 58.718 43.478 0.00 0.00 0.00 4.17
2768 4116 3.243068 GCATCGAAACTGTTCTTGTTGGT 60.243 43.478 0.00 0.00 0.00 3.67
2769 4117 3.243035 TGCATCGAAACTGTTCTTGTTGG 60.243 43.478 0.00 0.00 0.00 3.77
2781 4129 3.243068 ACAAGAAGGTTGTGCATCGAAAC 60.243 43.478 0.00 0.00 0.00 2.78
2807 4155 0.468226 GAGGCGATCCATGGTGGTAA 59.532 55.000 12.58 0.00 39.03 2.85
2901 4275 1.470632 CCTCTGAGCGCGAGAAATCTT 60.471 52.381 12.10 0.00 0.00 2.40
2902 4276 0.102120 CCTCTGAGCGCGAGAAATCT 59.898 55.000 12.10 0.00 0.00 2.40
2906 4280 1.315981 ATGACCTCTGAGCGCGAGAA 61.316 55.000 12.10 0.00 0.00 2.87
2907 4281 1.315981 AATGACCTCTGAGCGCGAGA 61.316 55.000 12.10 11.44 0.00 4.04
2912 4307 2.084610 TGTGAAATGACCTCTGAGCG 57.915 50.000 0.00 0.00 0.00 5.03
2917 4312 5.624159 TGTCAGATTTGTGAAATGACCTCT 58.376 37.500 0.00 0.00 35.93 3.69
2921 4316 4.520492 ACCCTGTCAGATTTGTGAAATGAC 59.480 41.667 0.00 0.00 36.68 3.06
2941 4336 2.233431 TGCAAGCATGAAATTGGTACCC 59.767 45.455 10.07 0.00 0.00 3.69
3031 4532 3.140225 GATCGTCTGACGGAGGGGC 62.140 68.421 27.69 9.15 42.81 5.80
3136 4658 3.636231 TGGTCCGAAGCCACCTGG 61.636 66.667 0.00 0.00 33.36 4.45
3187 4727 4.814294 GAACGTCGATGGCGGGCT 62.814 66.667 9.90 0.00 38.28 5.19
3342 4903 1.576577 ACATCAGATCTGGTGAGGCA 58.423 50.000 36.78 11.48 44.18 4.75
3345 4906 7.438757 CAGAGAATTTACATCAGATCTGGTGAG 59.561 40.741 36.78 16.37 44.18 3.51
3373 4934 9.784531 CTCTGTATACCTAATCCAAATTCACAT 57.215 33.333 0.00 0.00 0.00 3.21
3390 4951 5.232610 ACGACAGTGTTAGCTCTGTATAC 57.767 43.478 13.32 0.00 45.86 1.47
3558 5128 6.754193 TGAAACTATTCCCAATCCAAAACAC 58.246 36.000 0.00 0.00 34.49 3.32
3600 5170 3.055819 TCGTGCTGAAGCTCCTTCTATTT 60.056 43.478 3.61 0.00 40.73 1.40
3601 5171 2.497675 TCGTGCTGAAGCTCCTTCTATT 59.502 45.455 3.61 0.00 40.73 1.73
3602 5172 2.103373 TCGTGCTGAAGCTCCTTCTAT 58.897 47.619 3.61 0.00 40.73 1.98
3603 5173 1.545841 TCGTGCTGAAGCTCCTTCTA 58.454 50.000 3.61 0.00 40.73 2.10
3604 5174 0.901124 ATCGTGCTGAAGCTCCTTCT 59.099 50.000 3.61 0.00 40.73 2.85
3605 5175 1.005340 CATCGTGCTGAAGCTCCTTC 58.995 55.000 3.61 0.00 42.66 3.46
3619 5195 4.569943 AGTTGCATGTCTAAAGTCATCGT 58.430 39.130 0.00 0.00 0.00 3.73
3655 5231 1.490490 TCATCCGGGAAGAGAAATGGG 59.510 52.381 0.00 0.00 0.00 4.00
3701 5277 2.366916 CCATCTAAAGGACGCTGGAGAT 59.633 50.000 0.00 0.00 0.00 2.75
3715 5291 2.418197 GCAGTTGCTACCGACCATCTAA 60.418 50.000 0.00 0.00 38.21 2.10
3717 5293 0.108138 GCAGTTGCTACCGACCATCT 60.108 55.000 0.00 0.00 38.21 2.90
3727 5303 4.645762 TGTTTCAACAATGCAGTTGCTA 57.354 36.364 12.68 2.71 46.44 3.49
3849 5425 8.038944 GTGTGTTGGTTCTAAGAATATGTCCTA 58.961 37.037 0.00 0.00 0.00 2.94
3892 5468 3.624861 GCAAGCAATACTGTAGACATGCT 59.375 43.478 11.83 11.83 45.32 3.79
3895 5471 4.220693 TGGCAAGCAATACTGTAGACAT 57.779 40.909 0.00 0.00 0.00 3.06
3900 5476 3.343617 GAGGTTGGCAAGCAATACTGTA 58.656 45.455 28.85 0.00 0.00 2.74
3902 5478 1.131126 CGAGGTTGGCAAGCAATACTG 59.869 52.381 28.85 9.58 0.00 2.74
3913 5489 5.767816 ATTAATGGAAATACGAGGTTGGC 57.232 39.130 0.00 0.00 0.00 4.52
3964 5540 9.574516 AATTGTCACTTTCATTAACTCCTTAGT 57.425 29.630 0.00 0.00 37.65 2.24
3975 5551 7.867403 ACGATGCTTTTAATTGTCACTTTCATT 59.133 29.630 0.00 0.00 0.00 2.57
3988 5564 5.506317 GCCATGAGCTTACGATGCTTTTAAT 60.506 40.000 0.00 0.00 41.30 1.40
3990 5566 3.312421 GCCATGAGCTTACGATGCTTTTA 59.688 43.478 0.00 0.00 41.30 1.52
3994 5570 0.178767 TGCCATGAGCTTACGATGCT 59.821 50.000 0.00 0.00 44.23 3.79
3995 5571 1.233019 ATGCCATGAGCTTACGATGC 58.767 50.000 0.00 0.00 44.23 3.91
3996 5572 2.874086 TGAATGCCATGAGCTTACGATG 59.126 45.455 0.00 0.00 44.23 3.84
3997 5573 3.198409 TGAATGCCATGAGCTTACGAT 57.802 42.857 0.00 0.00 44.23 3.73
3998 5574 2.689553 TGAATGCCATGAGCTTACGA 57.310 45.000 0.00 0.00 44.23 3.43
3999 5575 3.976793 AATGAATGCCATGAGCTTACG 57.023 42.857 0.00 0.00 44.23 3.18
4000 5576 5.163581 ACTCAAATGAATGCCATGAGCTTAC 60.164 40.000 0.00 0.00 44.23 2.34
4001 5577 4.951715 ACTCAAATGAATGCCATGAGCTTA 59.048 37.500 0.00 0.00 44.23 3.09
4002 5578 3.767673 ACTCAAATGAATGCCATGAGCTT 59.232 39.130 0.00 0.00 44.23 3.74
4003 5579 3.362706 ACTCAAATGAATGCCATGAGCT 58.637 40.909 0.00 0.00 44.23 4.09
4004 5580 3.490419 GGACTCAAATGAATGCCATGAGC 60.490 47.826 0.00 0.00 44.14 4.26
4005 5581 3.697542 TGGACTCAAATGAATGCCATGAG 59.302 43.478 0.00 0.00 35.24 2.90
4006 5582 3.699413 TGGACTCAAATGAATGCCATGA 58.301 40.909 0.00 0.00 35.24 3.07
4007 5583 4.459390 TTGGACTCAAATGAATGCCATG 57.541 40.909 0.00 0.00 35.24 3.66
4008 5584 4.283978 TGTTTGGACTCAAATGAATGCCAT 59.716 37.500 0.00 0.00 43.73 4.40
4009 5585 3.640498 TGTTTGGACTCAAATGAATGCCA 59.360 39.130 0.00 0.00 43.73 4.92
4010 5586 4.255833 TGTTTGGACTCAAATGAATGCC 57.744 40.909 0.00 0.00 43.73 4.40
4189 5767 6.226052 AGTTGATTTCCAGCTTCCAATTTTC 58.774 36.000 0.00 0.00 31.97 2.29
4201 5779 7.652909 TGCAAACTTTTCATAGTTGATTTCCAG 59.347 33.333 0.00 0.00 38.33 3.86
4232 5810 7.281999 TCGGCATACAAATTCTTGTGATTATCA 59.718 33.333 0.81 0.00 45.53 2.15
4250 5828 1.134521 TCATCCTGGTGTTCGGCATAC 60.135 52.381 0.00 0.00 0.00 2.39
4255 5833 2.496070 TCTTAGTCATCCTGGTGTTCGG 59.504 50.000 0.00 0.00 0.00 4.30
4256 5834 3.868757 TCTTAGTCATCCTGGTGTTCG 57.131 47.619 0.00 0.00 0.00 3.95
4262 6003 6.840780 AACCATTTTTCTTAGTCATCCTGG 57.159 37.500 0.00 0.00 0.00 4.45
4269 6010 9.678941 CTCCAGTTTAAACCATTTTTCTTAGTC 57.321 33.333 14.72 0.00 0.00 2.59
4312 6053 6.909550 ACTATTTGTTTGGCATAGAACCAA 57.090 33.333 0.00 0.00 45.37 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.