Multiple sequence alignment - TraesCS6B01G061900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G061900 chr6B 100.000 3838 0 0 1 3838 41438033 41434196 0.000000e+00 7088
1 TraesCS6B01G061900 chr6B 80.662 393 49 15 3290 3670 41435119 41434742 2.920000e-71 279
2 TraesCS6B01G061900 chr6D 93.978 2491 117 15 964 3432 25616763 25614284 0.000000e+00 3738
3 TraesCS6B01G061900 chr6D 96.795 312 10 0 3526 3837 25614278 25613967 4.390000e-144 521
4 TraesCS6B01G061900 chr6D 77.532 632 115 20 2 618 89265684 89265065 4.720000e-94 355
5 TraesCS6B01G061900 chr6D 81.586 391 52 8 3290 3670 25614798 25614418 4.820000e-79 305
6 TraesCS6B01G061900 chr6D 84.615 156 20 4 734 886 29379124 29378970 6.640000e-33 152
7 TraesCS6B01G061900 chr6A 92.991 2354 130 19 964 3290 23604067 23601722 0.000000e+00 3400
8 TraesCS6B01G061900 chr6A 93.648 551 30 1 3288 3838 23595861 23595316 0.000000e+00 819
9 TraesCS6B01G061900 chr6A 82.005 389 46 11 2915 3292 23595859 23595484 3.720000e-80 309
10 TraesCS6B01G061900 chr3D 79.058 616 105 18 2 603 451893042 451893647 5.970000e-108 401
11 TraesCS6B01G061900 chr1B 77.346 618 105 26 2 603 643025186 643025784 2.210000e-87 333
12 TraesCS6B01G061900 chr1B 77.138 608 105 24 2 593 671525961 671526550 4.780000e-84 322
13 TraesCS6B01G061900 chr7D 76.814 634 118 22 2 618 590215084 590214463 2.860000e-86 329
14 TraesCS6B01G061900 chr7D 79.907 214 31 6 725 928 631524676 631524465 3.090000e-31 147
15 TraesCS6B01G061900 chr7D 80.682 176 28 6 725 895 120304158 120303984 8.650000e-27 132
16 TraesCS6B01G061900 chr7B 77.110 616 111 26 2 603 10565911 10566510 2.860000e-86 329
17 TraesCS6B01G061900 chr7B 81.102 381 63 8 36 413 128139365 128139739 2.900000e-76 296
18 TraesCS6B01G061900 chr7B 76.637 565 104 15 3 554 362021851 362021302 1.740000e-73 287
19 TraesCS6B01G061900 chr7B 82.143 168 27 3 731 896 144629410 144629576 1.440000e-29 141
20 TraesCS6B01G061900 chr5B 76.974 608 107 20 2 593 434935482 434936072 2.230000e-82 316
21 TraesCS6B01G061900 chr5B 78.550 331 61 8 2877 3200 703893969 703893642 3.890000e-50 209
22 TraesCS6B01G061900 chr5B 82.787 244 15 8 1295 1538 125799171 125798955 3.910000e-45 193
23 TraesCS6B01G061900 chr5B 82.759 174 27 3 725 896 679802506 679802678 6.640000e-33 152
24 TraesCS6B01G061900 chr5B 74.265 408 67 28 3354 3739 703893862 703893471 1.860000e-28 137
25 TraesCS6B01G061900 chr5B 82.036 167 22 6 3315 3479 703803997 703803837 6.690000e-28 135
26 TraesCS6B01G061900 chr1A 76.547 614 122 15 2 602 404429762 404430366 2.230000e-82 316
27 TraesCS6B01G061900 chr5D 82.173 359 62 2 25 382 547072899 547072542 1.340000e-79 307
28 TraesCS6B01G061900 chr5D 79.348 368 63 12 2868 3227 552408526 552408888 2.960000e-61 246
29 TraesCS6B01G061900 chr5D 76.339 448 76 23 2867 3292 551545077 551544638 3.000000e-51 213
30 TraesCS6B01G061900 chr5D 77.843 343 58 15 2867 3200 551469009 551468676 3.020000e-46 196
31 TraesCS6B01G061900 chr5D 76.946 334 68 6 2871 3200 551408930 551408602 8.470000e-42 182
32 TraesCS6B01G061900 chr5D 73.982 442 89 19 3294 3718 552408577 552409009 5.130000e-34 156
33 TraesCS6B01G061900 chr5D 88.506 87 6 4 3412 3496 551468839 551468755 6.780000e-18 102
34 TraesCS6B01G061900 chr4B 76.214 618 112 25 2 603 655053152 655052554 1.040000e-75 294
35 TraesCS6B01G061900 chr1D 76.827 561 106 9 2 551 424924666 424924119 1.040000e-75 294
36 TraesCS6B01G061900 chr1D 82.166 157 25 3 725 879 377966207 377966052 8.650000e-27 132
37 TraesCS6B01G061900 chr5A 75.689 617 105 30 2 602 654846911 654846324 2.270000e-67 267
38 TraesCS6B01G061900 chr3A 75.321 624 119 24 2 602 710336348 710336959 2.270000e-67 267
39 TraesCS6B01G061900 chr3A 75.735 544 99 22 80 602 710457029 710457560 3.830000e-60 243
40 TraesCS6B01G061900 chr3A 75.596 545 99 23 80 602 710397288 710397820 4.960000e-59 239
41 TraesCS6B01G061900 chrUn 75.735 544 99 22 80 602 359657305 359657836 3.830000e-60 243
42 TraesCS6B01G061900 chr4A 77.313 335 60 15 2868 3194 616662906 616663232 2.350000e-42 183
43 TraesCS6B01G061900 chr4A 82.099 162 22 5 3315 3475 616701720 616701875 8.650000e-27 132
44 TraesCS6B01G061900 chr4A 81.098 164 20 9 3315 3475 632616635 632616790 1.870000e-23 121
45 TraesCS6B01G061900 chr2B 79.724 217 28 9 725 930 711001538 711001327 4.000000e-30 143
46 TraesCS6B01G061900 chr2D 81.212 165 23 7 734 894 621036974 621037134 4.030000e-25 126
47 TraesCS6B01G061900 chr2A 79.769 173 31 4 725 895 756496261 756496431 5.210000e-24 122


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G061900 chr6B 41434196 41438033 3837 True 3683.500000 7088 90.331000 1 3838 2 chr6B.!!$R1 3837
1 TraesCS6B01G061900 chr6D 25613967 25616763 2796 True 1521.333333 3738 90.786333 964 3837 3 chr6D.!!$R3 2873
2 TraesCS6B01G061900 chr6D 89265065 89265684 619 True 355.000000 355 77.532000 2 618 1 chr6D.!!$R2 616
3 TraesCS6B01G061900 chr6A 23601722 23604067 2345 True 3400.000000 3400 92.991000 964 3290 1 chr6A.!!$R1 2326
4 TraesCS6B01G061900 chr6A 23595316 23595861 545 True 564.000000 819 87.826500 2915 3838 2 chr6A.!!$R2 923
5 TraesCS6B01G061900 chr3D 451893042 451893647 605 False 401.000000 401 79.058000 2 603 1 chr3D.!!$F1 601
6 TraesCS6B01G061900 chr1B 643025186 643025784 598 False 333.000000 333 77.346000 2 603 1 chr1B.!!$F1 601
7 TraesCS6B01G061900 chr1B 671525961 671526550 589 False 322.000000 322 77.138000 2 593 1 chr1B.!!$F2 591
8 TraesCS6B01G061900 chr7D 590214463 590215084 621 True 329.000000 329 76.814000 2 618 1 chr7D.!!$R2 616
9 TraesCS6B01G061900 chr7B 10565911 10566510 599 False 329.000000 329 77.110000 2 603 1 chr7B.!!$F1 601
10 TraesCS6B01G061900 chr7B 362021302 362021851 549 True 287.000000 287 76.637000 3 554 1 chr7B.!!$R1 551
11 TraesCS6B01G061900 chr5B 434935482 434936072 590 False 316.000000 316 76.974000 2 593 1 chr5B.!!$F1 591
12 TraesCS6B01G061900 chr1A 404429762 404430366 604 False 316.000000 316 76.547000 2 602 1 chr1A.!!$F1 600
13 TraesCS6B01G061900 chr4B 655052554 655053152 598 True 294.000000 294 76.214000 2 603 1 chr4B.!!$R1 601
14 TraesCS6B01G061900 chr1D 424924119 424924666 547 True 294.000000 294 76.827000 2 551 1 chr1D.!!$R2 549
15 TraesCS6B01G061900 chr5A 654846324 654846911 587 True 267.000000 267 75.689000 2 602 1 chr5A.!!$R1 600
16 TraesCS6B01G061900 chr3A 710336348 710336959 611 False 267.000000 267 75.321000 2 602 1 chr3A.!!$F1 600
17 TraesCS6B01G061900 chr3A 710457029 710457560 531 False 243.000000 243 75.735000 80 602 1 chr3A.!!$F3 522
18 TraesCS6B01G061900 chr3A 710397288 710397820 532 False 239.000000 239 75.596000 80 602 1 chr3A.!!$F2 522
19 TraesCS6B01G061900 chrUn 359657305 359657836 531 False 243.000000 243 75.735000 80 602 1 chrUn.!!$F1 522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
608 636 0.034337 GGTTTCTAGTCGCCCACACA 59.966 55.0 0.0 0.0 0.00 3.72 F
697 725 0.035152 TGGTTGCCAGCGATTCTCAT 60.035 50.0 0.0 0.0 0.00 2.90 F
701 729 0.036105 TGCCAGCGATTCTCATGTGT 60.036 50.0 0.0 0.0 0.00 3.72 F
749 777 0.037232 GGAGCCTTAGCACGACAACT 60.037 55.0 0.0 0.0 43.56 3.16 F
757 785 0.104304 AGCACGACAACTTTCGGACT 59.896 50.0 0.0 0.0 43.58 3.85 F
1647 1697 0.179000 GGAATGACGCTGTGGAGGAT 59.821 55.0 0.0 0.0 0.00 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2276 2326 0.042581 ATTCCGGGCTCCCCATTTTT 59.957 50.000 0.00 0.00 45.83 1.94 R
2524 2574 0.105039 CCGCCACTCCTGAATCTACC 59.895 60.000 0.00 0.00 0.00 3.18 R
2590 2640 2.836981 CTCCTCCATCTTCTCTGTTGGT 59.163 50.000 0.00 0.00 0.00 3.67 R
2712 2762 0.994995 CTGATGTTGGTCGAAGCGAG 59.005 55.000 0.00 0.00 36.23 5.03 R
2715 2765 2.417719 AGTTCTGATGTTGGTCGAAGC 58.582 47.619 0.00 0.00 0.00 3.86 R
3516 3570 0.254747 TCAAGGGTAAATCCGGCTGG 59.745 55.000 4.71 4.71 37.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.194597 TGGCTCACCAAAAGGCGT 59.805 55.556 0.00 0.00 45.37 5.68
61 63 2.779506 GGATCAGACCGAAAAACACCT 58.220 47.619 0.00 0.00 0.00 4.00
64 66 3.269538 TCAGACCGAAAAACACCTTGA 57.730 42.857 0.00 0.00 0.00 3.02
68 70 3.951680 AGACCGAAAAACACCTTGAACAT 59.048 39.130 0.00 0.00 0.00 2.71
97 99 2.116983 CTCCAGATATGGCACCCCCG 62.117 65.000 0.00 0.00 35.87 5.73
115 119 1.135373 CCGCATGACTAAGACGTCAGT 60.135 52.381 19.50 13.45 46.07 3.41
123 127 3.432378 ACTAAGACGTCAGTGGAGGAAT 58.568 45.455 19.50 0.00 33.25 3.01
127 131 0.611062 ACGTCAGTGGAGGAATCCGA 60.611 55.000 0.00 0.00 33.25 4.55
134 138 0.909610 TGGAGGAATCCGAACCTGCT 60.910 55.000 14.22 0.00 43.40 4.24
136 140 1.069358 GGAGGAATCCGAACCTGCTAG 59.931 57.143 0.00 0.00 40.59 3.42
140 144 0.618458 AATCCGAACCTGCTAGCCAA 59.382 50.000 13.29 0.00 0.00 4.52
152 157 1.626654 CTAGCCAACAACCACGAGCG 61.627 60.000 0.00 0.00 0.00 5.03
153 158 2.372040 TAGCCAACAACCACGAGCGT 62.372 55.000 0.00 0.00 0.00 5.07
174 182 2.651455 AGCACATGATCCACCATCTTG 58.349 47.619 0.00 0.00 40.83 3.02
180 188 3.657398 TGATCCACCATCTTGCAGATT 57.343 42.857 0.00 0.00 31.32 2.40
182 190 3.054213 TGATCCACCATCTTGCAGATTCA 60.054 43.478 0.00 0.00 31.32 2.57
198 206 3.190849 CAGCCGATGCAGACCACG 61.191 66.667 0.00 0.00 41.13 4.94
201 209 1.815421 GCCGATGCAGACCACGATT 60.815 57.895 0.00 0.00 37.47 3.34
267 275 1.369930 CAAACGCCGTCGCAACAAT 60.370 52.632 0.00 0.00 39.84 2.71
272 280 3.039202 GCCGTCGCAACAATGGAGG 62.039 63.158 0.00 0.00 34.03 4.30
280 288 1.887956 GCAACAATGGAGGCTGAGGAA 60.888 52.381 0.00 0.00 0.00 3.36
324 332 0.249447 CATCGCTACGCCATCCTTGA 60.249 55.000 0.00 0.00 0.00 3.02
327 335 1.684450 TCGCTACGCCATCCTTGATTA 59.316 47.619 0.00 0.00 0.00 1.75
336 344 5.116180 CGCCATCCTTGATTAAACAGACTA 58.884 41.667 0.00 0.00 0.00 2.59
390 405 0.619255 TGCCTCGTTGGGGAAGGATA 60.619 55.000 0.00 0.00 36.00 2.59
400 415 2.443255 TGGGGAAGGATATGAAGCTTCC 59.557 50.000 23.42 8.71 41.89 3.46
413 428 4.724399 TGAAGCTTCCTTATTCAACACCA 58.276 39.130 23.42 0.00 30.33 4.17
433 457 0.815095 TCGCAGAAGCCAAGACGATA 59.185 50.000 0.00 0.00 37.52 2.92
436 460 2.415168 CGCAGAAGCCAAGACGATAAAA 59.585 45.455 0.00 0.00 37.52 1.52
437 461 3.725010 CGCAGAAGCCAAGACGATAAAAC 60.725 47.826 0.00 0.00 37.52 2.43
439 463 3.678072 CAGAAGCCAAGACGATAAAACGA 59.322 43.478 0.00 0.00 37.03 3.85
520 546 2.363925 GCCCCCTCACTACCGACT 60.364 66.667 0.00 0.00 0.00 4.18
569 595 2.481449 CCGAAGAAAGACGGTAGATGGG 60.481 54.545 0.00 0.00 43.53 4.00
577 605 0.851469 ACGGTAGATGGGCTCTCCTA 59.149 55.000 0.00 0.00 35.28 2.94
579 607 1.202952 CGGTAGATGGGCTCTCCTAGT 60.203 57.143 0.00 0.00 35.28 2.57
581 609 2.425102 GGTAGATGGGCTCTCCTAGTGT 60.425 54.545 0.00 0.00 35.28 3.55
604 632 1.481871 CTAGGGTTTCTAGTCGCCCA 58.518 55.000 16.43 5.97 43.42 5.36
606 634 0.834687 AGGGTTTCTAGTCGCCCACA 60.835 55.000 16.43 0.00 43.42 4.17
608 636 0.034337 GGTTTCTAGTCGCCCACACA 59.966 55.000 0.00 0.00 0.00 3.72
618 646 1.825474 TCGCCCACACAAAAGGAAAAA 59.175 42.857 0.00 0.00 0.00 1.94
639 667 5.496133 AAAGACTCAATGATGTGCTATGC 57.504 39.130 0.00 0.00 0.00 3.14
640 668 4.146745 AGACTCAATGATGTGCTATGCA 57.853 40.909 0.00 0.00 35.60 3.96
652 680 3.117491 TGCTATGCACTTGATAGGAGC 57.883 47.619 0.00 0.00 31.71 4.70
653 681 2.435437 TGCTATGCACTTGATAGGAGCA 59.565 45.455 0.00 0.00 39.67 4.26
654 682 3.118298 TGCTATGCACTTGATAGGAGCAA 60.118 43.478 0.00 0.00 39.10 3.91
655 683 4.070716 GCTATGCACTTGATAGGAGCAAT 58.929 43.478 0.00 0.00 39.10 3.56
656 684 4.518211 GCTATGCACTTGATAGGAGCAATT 59.482 41.667 0.00 0.00 39.10 2.32
657 685 5.009410 GCTATGCACTTGATAGGAGCAATTT 59.991 40.000 0.00 0.00 39.10 1.82
658 686 6.205464 GCTATGCACTTGATAGGAGCAATTTA 59.795 38.462 0.00 0.00 39.10 1.40
659 687 5.818136 TGCACTTGATAGGAGCAATTTAC 57.182 39.130 0.00 0.00 34.82 2.01
660 688 5.500234 TGCACTTGATAGGAGCAATTTACT 58.500 37.500 0.00 0.00 34.82 2.24
661 689 5.945784 TGCACTTGATAGGAGCAATTTACTT 59.054 36.000 0.00 0.00 34.82 2.24
662 690 6.434028 TGCACTTGATAGGAGCAATTTACTTT 59.566 34.615 0.00 0.00 34.82 2.66
663 691 7.609918 TGCACTTGATAGGAGCAATTTACTTTA 59.390 33.333 0.00 0.00 34.82 1.85
664 692 8.458843 GCACTTGATAGGAGCAATTTACTTTAA 58.541 33.333 0.00 0.00 0.00 1.52
684 712 9.471084 ACTTTAAACTTTGTATAATGTGGTTGC 57.529 29.630 0.00 0.00 0.00 4.17
685 713 8.819643 TTTAAACTTTGTATAATGTGGTTGCC 57.180 30.769 0.00 0.00 0.00 4.52
686 714 6.412362 AAACTTTGTATAATGTGGTTGCCA 57.588 33.333 0.00 0.00 0.00 4.92
687 715 5.643379 ACTTTGTATAATGTGGTTGCCAG 57.357 39.130 0.00 0.00 32.34 4.85
688 716 4.082245 ACTTTGTATAATGTGGTTGCCAGC 60.082 41.667 0.00 0.00 32.34 4.85
689 717 2.013400 TGTATAATGTGGTTGCCAGCG 58.987 47.619 0.00 0.00 32.34 5.18
690 718 2.285083 GTATAATGTGGTTGCCAGCGA 58.715 47.619 0.00 0.00 32.34 4.93
691 719 2.057137 ATAATGTGGTTGCCAGCGAT 57.943 45.000 0.00 0.00 32.34 4.58
692 720 1.832883 TAATGTGGTTGCCAGCGATT 58.167 45.000 0.00 0.00 32.34 3.34
693 721 0.527565 AATGTGGTTGCCAGCGATTC 59.472 50.000 0.00 0.00 32.34 2.52
694 722 0.322816 ATGTGGTTGCCAGCGATTCT 60.323 50.000 0.00 0.00 32.34 2.40
695 723 0.955428 TGTGGTTGCCAGCGATTCTC 60.955 55.000 0.00 0.00 32.34 2.87
696 724 0.955428 GTGGTTGCCAGCGATTCTCA 60.955 55.000 0.00 0.00 32.34 3.27
697 725 0.035152 TGGTTGCCAGCGATTCTCAT 60.035 50.000 0.00 0.00 0.00 2.90
698 726 0.379669 GGTTGCCAGCGATTCTCATG 59.620 55.000 0.00 0.00 0.00 3.07
699 727 1.089920 GTTGCCAGCGATTCTCATGT 58.910 50.000 0.00 0.00 0.00 3.21
700 728 1.089112 TTGCCAGCGATTCTCATGTG 58.911 50.000 0.00 0.00 0.00 3.21
701 729 0.036105 TGCCAGCGATTCTCATGTGT 60.036 50.000 0.00 0.00 0.00 3.72
702 730 1.089920 GCCAGCGATTCTCATGTGTT 58.910 50.000 0.00 0.00 0.00 3.32
703 731 2.279741 GCCAGCGATTCTCATGTGTTA 58.720 47.619 0.00 0.00 0.00 2.41
704 732 2.677836 GCCAGCGATTCTCATGTGTTAA 59.322 45.455 0.00 0.00 0.00 2.01
705 733 3.313526 GCCAGCGATTCTCATGTGTTAAT 59.686 43.478 0.00 0.00 0.00 1.40
706 734 4.787563 GCCAGCGATTCTCATGTGTTAATG 60.788 45.833 0.00 0.00 0.00 1.90
707 735 4.260907 CCAGCGATTCTCATGTGTTAATGG 60.261 45.833 0.00 0.00 0.00 3.16
708 736 4.571984 CAGCGATTCTCATGTGTTAATGGA 59.428 41.667 0.00 0.00 0.00 3.41
709 737 5.065090 CAGCGATTCTCATGTGTTAATGGAA 59.935 40.000 0.00 0.00 0.00 3.53
710 738 5.065218 AGCGATTCTCATGTGTTAATGGAAC 59.935 40.000 0.00 0.00 38.65 3.62
711 739 5.492854 CGATTCTCATGTGTTAATGGAACG 58.507 41.667 0.00 0.00 41.35 3.95
712 740 5.063438 CGATTCTCATGTGTTAATGGAACGT 59.937 40.000 0.00 0.00 41.35 3.99
713 741 6.402118 CGATTCTCATGTGTTAATGGAACGTT 60.402 38.462 0.00 0.00 41.35 3.99
714 742 6.627395 TTCTCATGTGTTAATGGAACGTTT 57.373 33.333 0.46 0.00 41.35 3.60
715 743 5.996219 TCTCATGTGTTAATGGAACGTTTG 58.004 37.500 0.46 0.00 41.35 2.93
716 744 5.529430 TCTCATGTGTTAATGGAACGTTTGT 59.471 36.000 0.46 0.00 41.35 2.83
717 745 6.038825 TCTCATGTGTTAATGGAACGTTTGTT 59.961 34.615 0.46 0.57 41.35 2.83
727 755 2.052782 AACGTTTGTTCCAGCTTCCT 57.947 45.000 0.00 0.00 30.83 3.36
728 756 1.308998 ACGTTTGTTCCAGCTTCCTG 58.691 50.000 0.00 0.00 38.85 3.86
729 757 1.308998 CGTTTGTTCCAGCTTCCTGT 58.691 50.000 0.00 0.00 37.38 4.00
730 758 1.002468 CGTTTGTTCCAGCTTCCTGTG 60.002 52.381 0.00 0.00 37.38 3.66
731 759 1.338020 GTTTGTTCCAGCTTCCTGTGG 59.662 52.381 0.00 0.00 37.38 4.17
732 760 0.843309 TTGTTCCAGCTTCCTGTGGA 59.157 50.000 0.00 0.00 41.29 4.02
733 761 0.397941 TGTTCCAGCTTCCTGTGGAG 59.602 55.000 0.00 0.00 43.80 3.86
734 762 0.957888 GTTCCAGCTTCCTGTGGAGC 60.958 60.000 0.00 0.00 43.80 4.70
735 763 2.045536 CCAGCTTCCTGTGGAGCC 60.046 66.667 0.00 0.00 37.38 4.70
736 764 2.600729 CCAGCTTCCTGTGGAGCCT 61.601 63.158 0.00 0.00 37.38 4.58
737 765 1.377994 CAGCTTCCTGTGGAGCCTT 59.622 57.895 0.00 0.00 34.31 4.35
738 766 0.615331 CAGCTTCCTGTGGAGCCTTA 59.385 55.000 0.00 0.00 34.31 2.69
739 767 0.908198 AGCTTCCTGTGGAGCCTTAG 59.092 55.000 0.00 0.00 31.21 2.18
740 768 0.746204 GCTTCCTGTGGAGCCTTAGC 60.746 60.000 0.00 0.00 40.32 3.09
741 769 0.615331 CTTCCTGTGGAGCCTTAGCA 59.385 55.000 0.00 0.00 43.56 3.49
742 770 0.324943 TTCCTGTGGAGCCTTAGCAC 59.675 55.000 0.00 0.00 43.56 4.40
743 771 1.448540 CCTGTGGAGCCTTAGCACG 60.449 63.158 0.00 0.00 43.56 5.34
744 772 1.591703 CTGTGGAGCCTTAGCACGA 59.408 57.895 0.00 0.00 43.56 4.35
745 773 0.737715 CTGTGGAGCCTTAGCACGAC 60.738 60.000 0.00 0.00 43.56 4.34
746 774 1.292223 GTGGAGCCTTAGCACGACA 59.708 57.895 0.00 0.00 43.56 4.35
747 775 0.320421 GTGGAGCCTTAGCACGACAA 60.320 55.000 0.00 0.00 43.56 3.18
748 776 0.320421 TGGAGCCTTAGCACGACAAC 60.320 55.000 0.00 0.00 43.56 3.32
749 777 0.037232 GGAGCCTTAGCACGACAACT 60.037 55.000 0.00 0.00 43.56 3.16
750 778 1.608283 GGAGCCTTAGCACGACAACTT 60.608 52.381 0.00 0.00 43.56 2.66
751 779 2.143925 GAGCCTTAGCACGACAACTTT 58.856 47.619 0.00 0.00 43.56 2.66
752 780 2.143925 AGCCTTAGCACGACAACTTTC 58.856 47.619 0.00 0.00 43.56 2.62
753 781 1.136336 GCCTTAGCACGACAACTTTCG 60.136 52.381 0.00 0.00 44.87 3.46
754 782 1.459592 CCTTAGCACGACAACTTTCGG 59.540 52.381 0.00 0.00 43.58 4.30
755 783 2.400399 CTTAGCACGACAACTTTCGGA 58.600 47.619 0.00 0.00 43.58 4.55
756 784 1.774639 TAGCACGACAACTTTCGGAC 58.225 50.000 0.00 0.00 43.58 4.79
757 785 0.104304 AGCACGACAACTTTCGGACT 59.896 50.000 0.00 0.00 43.58 3.85
758 786 0.232303 GCACGACAACTTTCGGACTG 59.768 55.000 0.00 0.00 43.58 3.51
759 787 1.567504 CACGACAACTTTCGGACTGT 58.432 50.000 0.00 0.00 43.58 3.55
760 788 1.521423 CACGACAACTTTCGGACTGTC 59.479 52.381 0.00 0.00 43.58 3.51
761 789 1.407979 ACGACAACTTTCGGACTGTCT 59.592 47.619 7.85 0.00 43.58 3.41
762 790 2.620115 ACGACAACTTTCGGACTGTCTA 59.380 45.455 7.85 0.00 43.58 2.59
763 791 3.255149 ACGACAACTTTCGGACTGTCTAT 59.745 43.478 7.85 0.00 43.58 1.98
764 792 4.235360 CGACAACTTTCGGACTGTCTATT 58.765 43.478 7.85 0.00 36.80 1.73
765 793 5.048504 ACGACAACTTTCGGACTGTCTATTA 60.049 40.000 7.85 0.00 43.58 0.98
766 794 5.285607 CGACAACTTTCGGACTGTCTATTAC 59.714 44.000 7.85 0.00 36.80 1.89
767 795 6.092955 ACAACTTTCGGACTGTCTATTACA 57.907 37.500 7.85 0.00 36.42 2.41
768 796 6.518493 ACAACTTTCGGACTGTCTATTACAA 58.482 36.000 7.85 0.00 37.74 2.41
769 797 6.423001 ACAACTTTCGGACTGTCTATTACAAC 59.577 38.462 7.85 0.00 37.74 3.32
770 798 6.092955 ACTTTCGGACTGTCTATTACAACA 57.907 37.500 7.85 0.00 37.74 3.33
771 799 6.518493 ACTTTCGGACTGTCTATTACAACAA 58.482 36.000 7.85 0.00 37.74 2.83
772 800 6.645415 ACTTTCGGACTGTCTATTACAACAAG 59.355 38.462 7.85 1.25 37.74 3.16
773 801 5.717078 TCGGACTGTCTATTACAACAAGT 57.283 39.130 7.85 0.00 37.74 3.16
774 802 6.092955 TCGGACTGTCTATTACAACAAGTT 57.907 37.500 7.85 0.00 37.74 2.66
775 803 6.518493 TCGGACTGTCTATTACAACAAGTTT 58.482 36.000 7.85 0.00 37.74 2.66
776 804 6.987992 TCGGACTGTCTATTACAACAAGTTTT 59.012 34.615 7.85 0.00 37.74 2.43
777 805 7.496591 TCGGACTGTCTATTACAACAAGTTTTT 59.503 33.333 7.85 0.00 37.74 1.94
778 806 7.586300 CGGACTGTCTATTACAACAAGTTTTTG 59.414 37.037 7.85 0.14 37.74 2.44
787 815 2.863401 ACAAGTTTTTGTTCCGCTCC 57.137 45.000 0.00 0.00 45.01 4.70
788 816 1.064952 ACAAGTTTTTGTTCCGCTCCG 59.935 47.619 0.00 0.00 45.01 4.63
789 817 4.148338 ACAAGTTTTTGTTCCGCTCCGG 62.148 50.000 0.00 0.00 45.01 5.14
806 834 3.560636 CCGGTGAGGAAAGACCATAAT 57.439 47.619 0.00 0.00 45.00 1.28
807 835 3.206150 CCGGTGAGGAAAGACCATAATG 58.794 50.000 0.00 0.00 45.00 1.90
808 836 3.206150 CGGTGAGGAAAGACCATAATGG 58.794 50.000 0.00 0.00 45.02 3.16
809 837 2.952310 GGTGAGGAAAGACCATAATGGC 59.048 50.000 0.00 0.00 42.67 4.40
810 838 2.614057 GTGAGGAAAGACCATAATGGCG 59.386 50.000 0.00 0.00 42.67 5.69
811 839 1.604278 GAGGAAAGACCATAATGGCGC 59.396 52.381 0.00 0.00 42.67 6.53
812 840 0.668535 GGAAAGACCATAATGGCGCC 59.331 55.000 22.73 22.73 42.67 6.53
813 841 0.307760 GAAAGACCATAATGGCGCCG 59.692 55.000 23.90 8.78 42.67 6.46
814 842 1.724582 AAAGACCATAATGGCGCCGC 61.725 55.000 23.90 0.00 42.67 6.53
815 843 4.012895 GACCATAATGGCGCCGCG 62.013 66.667 23.90 8.83 42.67 6.46
829 857 3.414700 CGCGCTTTCGGCTCACTT 61.415 61.111 5.56 0.00 39.13 3.16
830 858 2.946762 GCGCTTTCGGCTCACTTT 59.053 55.556 0.00 0.00 39.13 2.66
831 859 1.623081 CGCGCTTTCGGCTCACTTTA 61.623 55.000 5.56 0.00 39.13 1.85
832 860 0.179222 GCGCTTTCGGCTCACTTTAC 60.179 55.000 0.00 0.00 39.13 2.01
833 861 1.429463 CGCTTTCGGCTCACTTTACT 58.571 50.000 0.00 0.00 39.13 2.24
834 862 1.126846 CGCTTTCGGCTCACTTTACTG 59.873 52.381 0.00 0.00 39.13 2.74
835 863 1.135944 GCTTTCGGCTCACTTTACTGC 60.136 52.381 0.00 0.00 38.06 4.40
836 864 2.417719 CTTTCGGCTCACTTTACTGCT 58.582 47.619 0.00 0.00 0.00 4.24
837 865 2.543777 TTCGGCTCACTTTACTGCTT 57.456 45.000 0.00 0.00 0.00 3.91
838 866 1.795768 TCGGCTCACTTTACTGCTTG 58.204 50.000 0.00 0.00 0.00 4.01
839 867 1.070134 TCGGCTCACTTTACTGCTTGT 59.930 47.619 0.00 0.00 0.00 3.16
840 868 2.297880 TCGGCTCACTTTACTGCTTGTA 59.702 45.455 0.00 0.00 0.00 2.41
841 869 2.668457 CGGCTCACTTTACTGCTTGTAG 59.332 50.000 0.00 0.00 32.08 2.74
842 870 3.665190 GGCTCACTTTACTGCTTGTAGT 58.335 45.455 0.00 0.00 32.08 2.73
843 871 3.680458 GGCTCACTTTACTGCTTGTAGTC 59.320 47.826 0.00 0.00 32.08 2.59
844 872 4.307432 GCTCACTTTACTGCTTGTAGTCA 58.693 43.478 0.00 0.00 32.08 3.41
845 873 4.932200 GCTCACTTTACTGCTTGTAGTCAT 59.068 41.667 0.00 0.00 32.08 3.06
846 874 5.062809 GCTCACTTTACTGCTTGTAGTCATC 59.937 44.000 0.00 0.00 32.08 2.92
847 875 5.161358 TCACTTTACTGCTTGTAGTCATCG 58.839 41.667 0.00 0.00 32.08 3.84
848 876 3.927142 ACTTTACTGCTTGTAGTCATCGC 59.073 43.478 0.00 0.00 32.08 4.58
849 877 3.868757 TTACTGCTTGTAGTCATCGCT 57.131 42.857 0.00 0.00 32.08 4.93
850 878 4.976224 TTACTGCTTGTAGTCATCGCTA 57.024 40.909 0.00 0.00 32.08 4.26
851 879 3.428746 ACTGCTTGTAGTCATCGCTAG 57.571 47.619 0.00 0.00 0.00 3.42
852 880 2.099921 ACTGCTTGTAGTCATCGCTAGG 59.900 50.000 0.00 0.00 0.00 3.02
853 881 2.099921 CTGCTTGTAGTCATCGCTAGGT 59.900 50.000 0.00 0.00 0.00 3.08
854 882 2.159240 TGCTTGTAGTCATCGCTAGGTG 60.159 50.000 0.00 0.00 0.00 4.00
855 883 2.799917 GCTTGTAGTCATCGCTAGGTGG 60.800 54.545 0.00 0.00 0.00 4.61
856 884 2.139323 TGTAGTCATCGCTAGGTGGT 57.861 50.000 0.00 0.00 0.00 4.16
857 885 2.022195 TGTAGTCATCGCTAGGTGGTC 58.978 52.381 0.00 0.00 0.00 4.02
858 886 2.299521 GTAGTCATCGCTAGGTGGTCT 58.700 52.381 0.00 0.00 0.00 3.85
859 887 2.730934 AGTCATCGCTAGGTGGTCTA 57.269 50.000 0.00 0.00 0.00 2.59
860 888 3.231207 AGTCATCGCTAGGTGGTCTAT 57.769 47.619 0.00 0.00 0.00 1.98
861 889 2.887783 AGTCATCGCTAGGTGGTCTATG 59.112 50.000 0.00 0.00 0.00 2.23
862 890 2.623889 GTCATCGCTAGGTGGTCTATGT 59.376 50.000 0.00 0.00 0.00 2.29
863 891 3.819337 GTCATCGCTAGGTGGTCTATGTA 59.181 47.826 0.00 0.00 0.00 2.29
864 892 4.459685 GTCATCGCTAGGTGGTCTATGTAT 59.540 45.833 0.00 0.00 0.00 2.29
865 893 4.700692 TCATCGCTAGGTGGTCTATGTATC 59.299 45.833 0.00 0.00 0.00 2.24
866 894 4.368565 TCGCTAGGTGGTCTATGTATCT 57.631 45.455 0.00 0.00 0.00 1.98
867 895 4.072839 TCGCTAGGTGGTCTATGTATCTG 58.927 47.826 0.00 0.00 0.00 2.90
868 896 3.191581 CGCTAGGTGGTCTATGTATCTGG 59.808 52.174 0.00 0.00 0.00 3.86
869 897 4.153411 GCTAGGTGGTCTATGTATCTGGT 58.847 47.826 0.00 0.00 0.00 4.00
870 898 4.021894 GCTAGGTGGTCTATGTATCTGGTG 60.022 50.000 0.00 0.00 0.00 4.17
871 899 3.995636 AGGTGGTCTATGTATCTGGTGT 58.004 45.455 0.00 0.00 0.00 4.16
872 900 3.706594 AGGTGGTCTATGTATCTGGTGTG 59.293 47.826 0.00 0.00 0.00 3.82
873 901 3.704566 GGTGGTCTATGTATCTGGTGTGA 59.295 47.826 0.00 0.00 0.00 3.58
874 902 4.345257 GGTGGTCTATGTATCTGGTGTGAT 59.655 45.833 0.00 0.00 0.00 3.06
875 903 5.163301 GGTGGTCTATGTATCTGGTGTGATT 60.163 44.000 0.00 0.00 0.00 2.57
876 904 6.349300 GTGGTCTATGTATCTGGTGTGATTT 58.651 40.000 0.00 0.00 0.00 2.17
877 905 6.823689 GTGGTCTATGTATCTGGTGTGATTTT 59.176 38.462 0.00 0.00 0.00 1.82
878 906 7.336931 GTGGTCTATGTATCTGGTGTGATTTTT 59.663 37.037 0.00 0.00 0.00 1.94
879 907 8.544622 TGGTCTATGTATCTGGTGTGATTTTTA 58.455 33.333 0.00 0.00 0.00 1.52
880 908 9.561069 GGTCTATGTATCTGGTGTGATTTTTAT 57.439 33.333 0.00 0.00 0.00 1.40
896 924 9.937577 GTGATTTTTATCATTTTTAGTGTTCGC 57.062 29.630 0.00 0.00 32.61 4.70
897 925 9.906660 TGATTTTTATCATTTTTAGTGTTCGCT 57.093 25.926 0.00 0.00 0.00 4.93
900 928 8.948853 TTTTATCATTTTTAGTGTTCGCTCTG 57.051 30.769 0.00 0.00 0.00 3.35
901 929 4.404507 TCATTTTTAGTGTTCGCTCTGC 57.595 40.909 0.00 0.00 0.00 4.26
902 930 3.188460 TCATTTTTAGTGTTCGCTCTGCC 59.812 43.478 0.00 0.00 0.00 4.85
903 931 2.543777 TTTTAGTGTTCGCTCTGCCT 57.456 45.000 0.00 0.00 0.00 4.75
904 932 1.795768 TTTAGTGTTCGCTCTGCCTG 58.204 50.000 0.00 0.00 0.00 4.85
905 933 0.966179 TTAGTGTTCGCTCTGCCTGA 59.034 50.000 0.00 0.00 0.00 3.86
906 934 0.966179 TAGTGTTCGCTCTGCCTGAA 59.034 50.000 0.00 0.00 0.00 3.02
907 935 0.320247 AGTGTTCGCTCTGCCTGAAG 60.320 55.000 0.00 0.00 0.00 3.02
908 936 0.319900 GTGTTCGCTCTGCCTGAAGA 60.320 55.000 0.00 0.00 0.00 2.87
909 937 0.610174 TGTTCGCTCTGCCTGAAGAT 59.390 50.000 0.00 0.00 0.00 2.40
910 938 1.002430 TGTTCGCTCTGCCTGAAGATT 59.998 47.619 0.00 0.00 0.00 2.40
911 939 2.233676 TGTTCGCTCTGCCTGAAGATTA 59.766 45.455 0.00 0.00 0.00 1.75
912 940 3.262420 GTTCGCTCTGCCTGAAGATTAA 58.738 45.455 0.00 0.00 0.00 1.40
913 941 3.827008 TCGCTCTGCCTGAAGATTAAT 57.173 42.857 0.00 0.00 0.00 1.40
914 942 4.937201 TCGCTCTGCCTGAAGATTAATA 57.063 40.909 0.00 0.00 0.00 0.98
915 943 4.876125 TCGCTCTGCCTGAAGATTAATAG 58.124 43.478 0.00 0.00 0.00 1.73
916 944 4.584743 TCGCTCTGCCTGAAGATTAATAGA 59.415 41.667 0.00 0.00 0.00 1.98
917 945 5.244851 TCGCTCTGCCTGAAGATTAATAGAT 59.755 40.000 0.00 0.00 0.00 1.98
918 946 5.931146 CGCTCTGCCTGAAGATTAATAGATT 59.069 40.000 0.00 0.00 0.00 2.40
919 947 6.128607 CGCTCTGCCTGAAGATTAATAGATTG 60.129 42.308 0.00 0.00 0.00 2.67
920 948 6.933521 GCTCTGCCTGAAGATTAATAGATTGA 59.066 38.462 0.00 0.00 0.00 2.57
921 949 7.443575 GCTCTGCCTGAAGATTAATAGATTGAA 59.556 37.037 0.00 0.00 0.00 2.69
922 950 9.334947 CTCTGCCTGAAGATTAATAGATTGAAA 57.665 33.333 0.00 0.00 0.00 2.69
923 951 9.334947 TCTGCCTGAAGATTAATAGATTGAAAG 57.665 33.333 0.00 0.00 0.00 2.62
924 952 9.118300 CTGCCTGAAGATTAATAGATTGAAAGT 57.882 33.333 0.00 0.00 0.00 2.66
925 953 9.466497 TGCCTGAAGATTAATAGATTGAAAGTT 57.534 29.630 0.00 0.00 0.00 2.66
961 989 2.923605 AACGTTTGTTCCAGCGAAAA 57.076 40.000 0.00 0.00 30.83 2.29
962 990 2.923605 ACGTTTGTTCCAGCGAAAAA 57.076 40.000 0.00 0.00 0.00 1.94
981 1009 3.931285 AAGAAAAGCGCAAAAGCAAAG 57.069 38.095 11.47 0.00 40.15 2.77
986 1014 1.943693 GCGCAAAAGCAAAGTCGCA 60.944 52.632 0.30 0.00 41.84 5.10
1014 1042 3.612247 CTCCACCCGTTGGCCTCAG 62.612 68.421 3.32 0.00 46.47 3.35
1142 1174 2.124996 CCCCTTCCTCTCACCCCA 59.875 66.667 0.00 0.00 0.00 4.96
1284 1316 4.479993 CAGCTCCTCAAGGCCCGG 62.480 72.222 0.00 0.00 34.44 5.73
1561 1593 4.082523 CGCGCTTCTTCCCCAGGA 62.083 66.667 5.56 0.00 0.00 3.86
1596 1628 2.831742 CAGCCCTACGCCCGTCTA 60.832 66.667 0.00 0.00 38.78 2.59
1647 1697 0.179000 GGAATGACGCTGTGGAGGAT 59.821 55.000 0.00 0.00 0.00 3.24
1650 1700 1.620739 ATGACGCTGTGGAGGATGCT 61.621 55.000 0.00 0.00 0.00 3.79
1660 1710 3.131396 GTGGAGGATGCTTATGGTTACG 58.869 50.000 0.00 0.00 0.00 3.18
1773 1823 5.470437 CAGGAGTTGGATTCATGATGATGAG 59.530 44.000 0.00 0.00 39.81 2.90
1794 1844 6.286758 TGAGGATGCTATTTCTGATTCAGAC 58.713 40.000 15.90 5.21 40.46 3.51
1795 1845 5.295950 AGGATGCTATTTCTGATTCAGACG 58.704 41.667 15.90 6.50 40.46 4.18
1811 1861 0.862283 GACGACGACGAAGAGGATGC 60.862 60.000 15.32 0.00 42.66 3.91
1829 1879 2.382882 TGCTGATTTTGGTCACCAACA 58.617 42.857 9.45 2.40 43.82 3.33
1837 1887 0.393132 TGGTCACCAACAACGAGCAA 60.393 50.000 0.00 0.00 34.46 3.91
1908 1958 2.129555 TTGGAAGTGAGAGGGGCAGC 62.130 60.000 0.00 0.00 0.00 5.25
1911 1961 1.919600 GAAGTGAGAGGGGCAGCCAT 61.920 60.000 15.19 0.00 0.00 4.40
1926 1976 1.105759 GCCATTGGAGAGGTCATGGC 61.106 60.000 6.95 6.27 46.07 4.40
1930 1980 1.274703 TTGGAGAGGTCATGGCTCCC 61.275 60.000 16.69 6.62 46.01 4.30
1959 2009 0.387750 CAGAAGGCGCAAGAAAAGGC 60.388 55.000 10.83 0.00 43.02 4.35
1964 2014 1.598701 GGCGCAAGAAAAGGCCATCT 61.599 55.000 10.83 2.12 44.91 2.90
2070 2120 2.406616 CGCCATTGGAAAGGACCGG 61.407 63.158 6.95 0.00 0.00 5.28
2262 2312 4.141274 TCAAATTCAGACAGTGGAAGGGAA 60.141 41.667 0.00 0.00 0.00 3.97
2276 2326 3.551846 GAAGGGAAGACAAACTGGAACA 58.448 45.455 0.00 0.00 0.00 3.18
2417 2467 3.085952 TGGTGATGAAAGGGACCAATC 57.914 47.619 0.00 0.00 35.51 2.67
2521 2571 5.046529 GCAGAGAGTACAACAGTGATATGG 58.953 45.833 0.00 0.00 0.00 2.74
2524 2574 6.977502 CAGAGAGTACAACAGTGATATGGAAG 59.022 42.308 0.00 0.00 0.00 3.46
2541 2591 2.158885 GGAAGGTAGATTCAGGAGTGGC 60.159 54.545 0.00 0.00 0.00 5.01
2570 2620 3.041874 CTGCAAGACGGCTAGACAG 57.958 57.895 0.00 0.00 34.07 3.51
2590 2640 3.057526 CAGTACTCGTCCTGTGATGAACA 60.058 47.826 0.00 0.00 36.11 3.18
2712 2762 2.223618 GCAGTTCAGAGGAGACGGATAC 60.224 54.545 0.00 0.00 0.00 2.24
2715 2765 2.242047 TCAGAGGAGACGGATACTCG 57.758 55.000 0.00 0.00 35.49 4.18
2718 2768 1.134037 AGAGGAGACGGATACTCGCTT 60.134 52.381 0.00 0.00 35.49 4.68
2743 2793 7.258441 TCGACCAACATCAGAACTTAGATAAG 58.742 38.462 0.00 0.00 39.18 1.73
2875 2925 5.694006 AGCTCGTGTGATATTTGCTATTCTC 59.306 40.000 0.00 0.00 0.00 2.87
2983 3034 5.101648 TGCACCACATGAATATCTTCTGA 57.898 39.130 0.00 0.00 32.29 3.27
3110 3161 8.985315 TGCTATATTCAGAAACCTGATGAATT 57.015 30.769 5.11 0.00 42.22 2.17
3118 3169 8.272545 TCAGAAACCTGATGAATTTGTATCTG 57.727 34.615 0.00 0.00 35.88 2.90
3146 3197 7.270779 TGATATCTTTTCTGAGTGTGATCCAG 58.729 38.462 3.98 0.00 0.00 3.86
3149 3200 3.685139 TTTCTGAGTGTGATCCAGTCC 57.315 47.619 13.33 1.58 42.00 3.85
3151 3202 1.177401 CTGAGTGTGATCCAGTCCGA 58.823 55.000 13.33 0.40 42.00 4.55
3176 3227 3.698040 CCTGTTTATCCTTGAAGCTGCAT 59.302 43.478 0.00 0.00 0.00 3.96
3214 3265 3.961849 TGGAGTATGGCATGTTGCTTTA 58.038 40.909 10.98 0.00 44.28 1.85
3299 3353 5.572211 CATCAACAACATACCATACTGCAC 58.428 41.667 0.00 0.00 0.00 4.57
3304 3358 2.764269 ACATACCATACTGCACCTCCT 58.236 47.619 0.00 0.00 0.00 3.69
3341 3395 2.288458 GGTAAGTTAACTTGCACGCACA 59.712 45.455 29.69 8.57 39.81 4.57
3349 3403 1.133982 ACTTGCACGCACAACATGAAA 59.866 42.857 0.00 0.00 0.00 2.69
3351 3405 3.004210 ACTTGCACGCACAACATGAAATA 59.996 39.130 0.00 0.00 0.00 1.40
3352 3406 3.632855 TGCACGCACAACATGAAATAA 57.367 38.095 0.00 0.00 0.00 1.40
3382 3436 6.148480 GCATCTACACATCATATGTTCTTCCC 59.852 42.308 1.90 0.00 42.70 3.97
3383 3437 7.448420 CATCTACACATCATATGTTCTTCCCT 58.552 38.462 1.90 0.00 42.70 4.20
3384 3438 7.437713 TCTACACATCATATGTTCTTCCCTT 57.562 36.000 1.90 0.00 42.70 3.95
3389 3443 7.770897 ACACATCATATGTTCTTCCCTTCTAAC 59.229 37.037 1.90 0.00 42.70 2.34
3398 3452 7.974504 TGTTCTTCCCTTCTAACTTTATCTGT 58.025 34.615 0.00 0.00 0.00 3.41
3401 3455 5.593679 TCCCTTCTAACTTTATCTGTCCG 57.406 43.478 0.00 0.00 0.00 4.79
3404 3458 5.105473 CCCTTCTAACTTTATCTGTCCGTCA 60.105 44.000 0.00 0.00 0.00 4.35
3410 3464 6.877611 AACTTTATCTGTCCGTCATGTTTT 57.122 33.333 0.00 0.00 0.00 2.43
3411 3465 6.877611 ACTTTATCTGTCCGTCATGTTTTT 57.122 33.333 0.00 0.00 0.00 1.94
3412 3466 6.899114 ACTTTATCTGTCCGTCATGTTTTTC 58.101 36.000 0.00 0.00 0.00 2.29
3432 3486 3.693807 TCTTCTTGCTGCAGATTTGGAT 58.306 40.909 20.43 0.00 0.00 3.41
3433 3487 4.084287 TCTTCTTGCTGCAGATTTGGATT 58.916 39.130 20.43 0.00 0.00 3.01
3434 3488 4.525487 TCTTCTTGCTGCAGATTTGGATTT 59.475 37.500 20.43 0.00 0.00 2.17
3437 3491 3.788333 TGCTGCAGATTTGGATTTAGC 57.212 42.857 20.43 0.00 0.00 3.09
3438 3492 2.428171 TGCTGCAGATTTGGATTTAGCC 59.572 45.455 20.43 0.00 0.00 3.93
3439 3493 2.542411 GCTGCAGATTTGGATTTAGCCG 60.542 50.000 20.43 0.00 0.00 5.52
3440 3494 2.023673 TGCAGATTTGGATTTAGCCGG 58.976 47.619 0.00 0.00 0.00 6.13
3441 3495 2.297701 GCAGATTTGGATTTAGCCGGA 58.702 47.619 5.05 0.00 0.00 5.14
3442 3496 2.687935 GCAGATTTGGATTTAGCCGGAA 59.312 45.455 5.05 0.00 0.00 4.30
3443 3497 3.489229 GCAGATTTGGATTTAGCCGGAAC 60.489 47.826 5.05 0.00 0.00 3.62
3444 3498 3.694072 CAGATTTGGATTTAGCCGGAACA 59.306 43.478 5.05 0.00 0.00 3.18
3445 3499 4.339247 CAGATTTGGATTTAGCCGGAACAT 59.661 41.667 5.05 0.00 0.00 2.71
3446 3500 4.580580 AGATTTGGATTTAGCCGGAACATC 59.419 41.667 5.05 0.00 0.00 3.06
3447 3501 2.341846 TGGATTTAGCCGGAACATCC 57.658 50.000 5.05 10.55 34.96 3.51
3456 3510 4.625800 GGAACATCCGAAGCAGCT 57.374 55.556 0.00 0.00 0.00 4.24
3457 3511 2.388347 GGAACATCCGAAGCAGCTC 58.612 57.895 0.00 0.00 0.00 4.09
3458 3512 0.391661 GGAACATCCGAAGCAGCTCA 60.392 55.000 0.00 0.00 0.00 4.26
3459 3513 0.723981 GAACATCCGAAGCAGCTCAC 59.276 55.000 0.00 0.00 0.00 3.51
3460 3514 0.322975 AACATCCGAAGCAGCTCACT 59.677 50.000 0.00 0.00 0.00 3.41
3477 3531 6.917217 GCTCACTGCTATATTCAGAAACTT 57.083 37.500 10.51 0.00 38.95 2.66
3478 3532 6.942891 GCTCACTGCTATATTCAGAAACTTC 58.057 40.000 10.51 0.00 38.95 3.01
3479 3533 6.018343 GCTCACTGCTATATTCAGAAACTTCC 60.018 42.308 10.51 0.00 38.95 3.46
3480 3534 7.187824 TCACTGCTATATTCAGAAACTTCCT 57.812 36.000 10.51 0.00 35.61 3.36
3481 3535 7.044181 TCACTGCTATATTCAGAAACTTCCTG 58.956 38.462 10.51 0.00 35.61 3.86
3482 3536 7.044181 CACTGCTATATTCAGAAACTTCCTGA 58.956 38.462 10.51 0.00 38.74 3.86
3491 3545 7.672983 TTCAGAAACTTCCTGAATGTGTATC 57.327 36.000 0.00 0.00 43.39 2.24
3492 3546 7.009179 TCAGAAACTTCCTGAATGTGTATCT 57.991 36.000 0.00 0.00 37.68 1.98
3493 3547 7.453393 TCAGAAACTTCCTGAATGTGTATCTT 58.547 34.615 0.00 0.00 37.68 2.40
3494 3548 7.939039 TCAGAAACTTCCTGAATGTGTATCTTT 59.061 33.333 0.00 0.00 37.68 2.52
3495 3549 8.233190 CAGAAACTTCCTGAATGTGTATCTTTC 58.767 37.037 0.00 0.00 33.65 2.62
3496 3550 7.391833 AGAAACTTCCTGAATGTGTATCTTTCC 59.608 37.037 0.00 0.00 31.71 3.13
3497 3551 6.380079 ACTTCCTGAATGTGTATCTTTCCT 57.620 37.500 0.00 0.00 31.71 3.36
3498 3552 6.176183 ACTTCCTGAATGTGTATCTTTCCTG 58.824 40.000 0.00 0.00 31.71 3.86
3499 3553 5.762179 TCCTGAATGTGTATCTTTCCTGT 57.238 39.130 0.00 0.00 31.71 4.00
3500 3554 5.491070 TCCTGAATGTGTATCTTTCCTGTG 58.509 41.667 0.00 0.00 31.71 3.66
3501 3555 5.013079 TCCTGAATGTGTATCTTTCCTGTGT 59.987 40.000 0.00 0.00 31.71 3.72
3502 3556 5.122869 CCTGAATGTGTATCTTTCCTGTGTG 59.877 44.000 0.00 0.00 31.71 3.82
3503 3557 5.863965 TGAATGTGTATCTTTCCTGTGTGA 58.136 37.500 0.00 0.00 31.71 3.58
3504 3558 6.475504 TGAATGTGTATCTTTCCTGTGTGAT 58.524 36.000 0.00 0.00 31.71 3.06
3505 3559 6.595326 TGAATGTGTATCTTTCCTGTGTGATC 59.405 38.462 0.00 0.00 31.71 2.92
3506 3560 5.745312 TGTGTATCTTTCCTGTGTGATCT 57.255 39.130 0.00 0.00 0.00 2.75
3507 3561 5.482006 TGTGTATCTTTCCTGTGTGATCTG 58.518 41.667 0.00 0.00 0.00 2.90
3508 3562 5.245977 TGTGTATCTTTCCTGTGTGATCTGA 59.754 40.000 0.00 0.00 0.00 3.27
3509 3563 6.070596 TGTGTATCTTTCCTGTGTGATCTGAT 60.071 38.462 0.00 0.00 0.00 2.90
3510 3564 6.478344 GTGTATCTTTCCTGTGTGATCTGATC 59.522 42.308 10.72 10.72 0.00 2.92
3511 3565 5.954153 ATCTTTCCTGTGTGATCTGATCT 57.046 39.130 17.82 0.00 0.00 2.75
3512 3566 5.082251 TCTTTCCTGTGTGATCTGATCTG 57.918 43.478 17.82 0.00 0.00 2.90
3513 3567 3.900966 TTCCTGTGTGATCTGATCTGG 57.099 47.619 17.82 11.72 0.00 3.86
3514 3568 3.105959 TCCTGTGTGATCTGATCTGGA 57.894 47.619 17.82 13.43 0.00 3.86
3515 3569 2.762887 TCCTGTGTGATCTGATCTGGAC 59.237 50.000 17.82 9.01 0.00 4.02
3516 3570 2.158986 CCTGTGTGATCTGATCTGGACC 60.159 54.545 17.82 4.38 0.00 4.46
3517 3571 1.833630 TGTGTGATCTGATCTGGACCC 59.166 52.381 17.82 1.39 0.00 4.46
3518 3572 1.833630 GTGTGATCTGATCTGGACCCA 59.166 52.381 17.82 3.68 0.00 4.51
3519 3573 2.113807 TGTGATCTGATCTGGACCCAG 58.886 52.381 17.82 9.74 44.86 4.45
3520 3574 1.126488 TGATCTGATCTGGACCCAGC 58.874 55.000 17.82 0.00 43.31 4.85
3521 3575 0.396060 GATCTGATCTGGACCCAGCC 59.604 60.000 11.11 6.31 43.31 4.85
3522 3576 1.406065 ATCTGATCTGGACCCAGCCG 61.406 60.000 11.11 0.39 43.31 5.52
3523 3577 3.083349 TGATCTGGACCCAGCCGG 61.083 66.667 11.11 0.00 43.31 6.13
3524 3578 2.764128 GATCTGGACCCAGCCGGA 60.764 66.667 5.05 0.00 46.82 5.14
3545 3599 4.321230 GGATTTACCCTTGAAACTGCACTG 60.321 45.833 0.00 0.00 0.00 3.66
3546 3600 1.604604 TACCCTTGAAACTGCACTGC 58.395 50.000 0.00 0.00 0.00 4.40
3586 3640 6.038714 GGATTATGGCTTGTTACCTTCTCTTG 59.961 42.308 0.00 0.00 0.00 3.02
3831 3885 2.900546 CCAAACACTCTCTACAGGGTCT 59.099 50.000 0.00 0.00 26.56 3.85
3833 3887 4.310769 CAAACACTCTCTACAGGGTCTTG 58.689 47.826 0.00 0.00 26.56 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.179200 GTTCAACGGCAATGGCTACG 60.179 55.000 5.02 0.00 40.87 3.51
22 23 0.179200 CGTTCAACGGCAATGGCTAC 60.179 55.000 0.61 0.00 38.08 3.58
23 24 2.167161 CGTTCAACGGCAATGGCTA 58.833 52.632 0.61 0.00 38.08 3.93
52 53 3.902881 TGGCATGTTCAAGGTGTTTTT 57.097 38.095 0.00 0.00 0.00 1.94
53 54 3.387374 TGATGGCATGTTCAAGGTGTTTT 59.613 39.130 3.81 0.00 0.00 2.43
61 63 3.229293 TGGAGTTTGATGGCATGTTCAA 58.771 40.909 3.81 0.34 0.00 2.69
64 66 3.159213 TCTGGAGTTTGATGGCATGTT 57.841 42.857 3.81 0.00 0.00 2.71
68 70 3.824133 CCATATCTGGAGTTTGATGGCA 58.176 45.455 0.00 0.00 46.37 4.92
115 119 0.909610 AGCAGGTTCGGATTCCTCCA 60.910 55.000 0.30 0.00 42.19 3.86
123 127 1.295423 GTTGGCTAGCAGGTTCGGA 59.705 57.895 18.24 0.00 0.00 4.55
127 131 0.184933 TGGTTGTTGGCTAGCAGGTT 59.815 50.000 18.24 0.00 0.00 3.50
134 138 1.666553 CGCTCGTGGTTGTTGGCTA 60.667 57.895 0.00 0.00 0.00 3.93
136 140 1.897398 CTACGCTCGTGGTTGTTGGC 61.897 60.000 5.05 0.00 0.00 4.52
140 144 1.663702 GTGCTACGCTCGTGGTTGT 60.664 57.895 5.05 0.00 0.00 3.32
152 157 3.482156 AGATGGTGGATCATGTGCTAC 57.518 47.619 0.00 0.00 32.86 3.58
153 158 3.812262 CAAGATGGTGGATCATGTGCTA 58.188 45.455 0.00 0.00 32.86 3.49
174 182 0.812811 TCTGCATCGGCTGAATCTGC 60.813 55.000 11.87 11.87 43.82 4.26
180 188 2.265739 GTGGTCTGCATCGGCTGA 59.734 61.111 0.00 0.00 44.46 4.26
182 190 2.244117 AATCGTGGTCTGCATCGGCT 62.244 55.000 0.00 0.00 41.91 5.52
198 206 0.464373 TCCAGGAGCGGATGCAAATC 60.464 55.000 0.00 0.00 46.23 2.17
201 209 0.975556 TAGTCCAGGAGCGGATGCAA 60.976 55.000 0.00 0.00 46.23 4.08
267 275 1.072331 GACTTGTTTCCTCAGCCTCCA 59.928 52.381 0.00 0.00 0.00 3.86
272 280 1.239347 GGTGGACTTGTTTCCTCAGC 58.761 55.000 0.00 0.00 36.51 4.26
280 288 2.218066 ACCTCGTGGTGGACTTGTT 58.782 52.632 8.68 0.00 46.51 2.83
311 319 4.873827 GTCTGTTTAATCAAGGATGGCGTA 59.126 41.667 0.00 0.00 0.00 4.42
336 344 7.493499 TGATTGGGGATGTATGTGAAAAATT 57.507 32.000 0.00 0.00 0.00 1.82
342 350 5.013079 GTCCTATGATTGGGGATGTATGTGA 59.987 44.000 0.00 0.00 0.00 3.58
345 353 5.249163 TCAGTCCTATGATTGGGGATGTATG 59.751 44.000 0.00 0.00 0.00 2.39
390 405 5.324409 TGGTGTTGAATAAGGAAGCTTCAT 58.676 37.500 27.02 18.73 0.00 2.57
400 415 4.728882 GCTTCTGCGATGGTGTTGAATAAG 60.729 45.833 0.00 0.00 0.00 1.73
413 428 0.176680 ATCGTCTTGGCTTCTGCGAT 59.823 50.000 0.00 0.00 40.82 4.58
433 457 9.201127 CTAGTAGCTTAGGTTTTTAGTCGTTTT 57.799 33.333 0.00 0.00 0.00 2.43
436 460 6.127507 CCCTAGTAGCTTAGGTTTTTAGTCGT 60.128 42.308 10.05 0.00 38.86 4.34
437 461 6.271566 CCCTAGTAGCTTAGGTTTTTAGTCG 58.728 44.000 10.05 0.00 38.86 4.18
439 463 5.104610 GGCCCTAGTAGCTTAGGTTTTTAGT 60.105 44.000 10.05 0.00 38.86 2.24
566 592 1.379977 CCGACACTAGGAGAGCCCA 60.380 63.158 0.00 0.00 37.41 5.36
569 595 0.948678 CTAGCCGACACTAGGAGAGC 59.051 60.000 0.00 0.00 36.74 4.09
577 605 2.100989 CTAGAAACCCTAGCCGACACT 58.899 52.381 0.00 0.00 38.53 3.55
579 607 2.097825 GACTAGAAACCCTAGCCGACA 58.902 52.381 0.00 0.00 46.98 4.35
618 646 4.520179 TGCATAGCACATCATTGAGTCTT 58.480 39.130 0.00 0.00 31.71 3.01
619 647 4.146745 TGCATAGCACATCATTGAGTCT 57.853 40.909 0.00 0.00 31.71 3.24
632 660 2.435437 TGCTCCTATCAAGTGCATAGCA 59.565 45.455 0.00 0.00 36.45 3.49
633 661 3.117491 TGCTCCTATCAAGTGCATAGC 57.883 47.619 0.00 0.00 0.00 2.97
634 662 6.630444 AAATTGCTCCTATCAAGTGCATAG 57.370 37.500 0.00 0.00 32.69 2.23
635 663 7.282585 AGTAAATTGCTCCTATCAAGTGCATA 58.717 34.615 0.00 0.00 32.69 3.14
636 664 6.125029 AGTAAATTGCTCCTATCAAGTGCAT 58.875 36.000 0.00 0.00 32.69 3.96
637 665 5.500234 AGTAAATTGCTCCTATCAAGTGCA 58.500 37.500 0.00 0.00 0.00 4.57
638 666 6.442513 AAGTAAATTGCTCCTATCAAGTGC 57.557 37.500 0.00 0.00 0.00 4.40
658 686 9.471084 GCAACCACATTATACAAAGTTTAAAGT 57.529 29.630 0.00 0.00 0.00 2.66
659 687 8.921670 GGCAACCACATTATACAAAGTTTAAAG 58.078 33.333 0.00 0.00 0.00 1.85
660 688 8.421784 TGGCAACCACATTATACAAAGTTTAAA 58.578 29.630 0.00 0.00 0.00 1.52
661 689 7.952671 TGGCAACCACATTATACAAAGTTTAA 58.047 30.769 0.00 0.00 0.00 1.52
662 690 7.526142 TGGCAACCACATTATACAAAGTTTA 57.474 32.000 0.00 0.00 0.00 2.01
663 691 6.412362 TGGCAACCACATTATACAAAGTTT 57.588 33.333 0.00 0.00 0.00 2.66
664 692 5.566627 GCTGGCAACCACATTATACAAAGTT 60.567 40.000 0.00 0.00 0.00 2.66
665 693 4.082245 GCTGGCAACCACATTATACAAAGT 60.082 41.667 0.00 0.00 0.00 2.66
666 694 4.423732 GCTGGCAACCACATTATACAAAG 58.576 43.478 0.00 0.00 0.00 2.77
667 695 3.119673 CGCTGGCAACCACATTATACAAA 60.120 43.478 0.00 0.00 0.00 2.83
668 696 2.421775 CGCTGGCAACCACATTATACAA 59.578 45.455 0.00 0.00 0.00 2.41
669 697 2.013400 CGCTGGCAACCACATTATACA 58.987 47.619 0.00 0.00 0.00 2.29
670 698 2.285083 TCGCTGGCAACCACATTATAC 58.715 47.619 0.00 0.00 0.00 1.47
671 699 2.700722 TCGCTGGCAACCACATTATA 57.299 45.000 0.00 0.00 0.00 0.98
672 700 2.057137 ATCGCTGGCAACCACATTAT 57.943 45.000 0.00 0.00 0.00 1.28
673 701 1.742831 GAATCGCTGGCAACCACATTA 59.257 47.619 0.00 0.00 0.00 1.90
674 702 0.527565 GAATCGCTGGCAACCACATT 59.472 50.000 0.00 0.00 0.00 2.71
675 703 0.322816 AGAATCGCTGGCAACCACAT 60.323 50.000 0.00 0.00 0.00 3.21
676 704 0.955428 GAGAATCGCTGGCAACCACA 60.955 55.000 0.00 0.00 0.00 4.17
677 705 0.955428 TGAGAATCGCTGGCAACCAC 60.955 55.000 0.00 0.00 38.61 4.16
678 706 0.035152 ATGAGAATCGCTGGCAACCA 60.035 50.000 0.00 0.00 38.61 3.67
679 707 0.379669 CATGAGAATCGCTGGCAACC 59.620 55.000 0.00 0.00 38.61 3.77
680 708 1.089920 ACATGAGAATCGCTGGCAAC 58.910 50.000 0.00 0.00 38.61 4.17
681 709 1.089112 CACATGAGAATCGCTGGCAA 58.911 50.000 0.00 0.00 38.61 4.52
682 710 0.036105 ACACATGAGAATCGCTGGCA 60.036 50.000 0.00 0.00 38.61 4.92
683 711 1.089920 AACACATGAGAATCGCTGGC 58.910 50.000 0.00 0.00 38.61 4.85
684 712 4.260907 CCATTAACACATGAGAATCGCTGG 60.261 45.833 0.00 0.00 38.61 4.85
685 713 4.571984 TCCATTAACACATGAGAATCGCTG 59.428 41.667 0.00 0.00 38.61 5.18
686 714 4.769688 TCCATTAACACATGAGAATCGCT 58.230 39.130 0.00 0.00 38.61 4.93
687 715 5.266242 GTTCCATTAACACATGAGAATCGC 58.734 41.667 0.00 0.00 36.44 4.58
688 716 5.063438 ACGTTCCATTAACACATGAGAATCG 59.937 40.000 0.00 0.00 36.27 3.34
689 717 6.422776 ACGTTCCATTAACACATGAGAATC 57.577 37.500 0.00 0.00 38.03 2.52
690 718 6.817765 AACGTTCCATTAACACATGAGAAT 57.182 33.333 0.00 0.00 38.03 2.40
691 719 6.038825 ACAAACGTTCCATTAACACATGAGAA 59.961 34.615 0.00 0.00 38.03 2.87
692 720 5.529430 ACAAACGTTCCATTAACACATGAGA 59.471 36.000 0.00 0.00 38.03 3.27
693 721 5.757886 ACAAACGTTCCATTAACACATGAG 58.242 37.500 0.00 0.00 38.03 2.90
694 722 5.759506 ACAAACGTTCCATTAACACATGA 57.240 34.783 0.00 0.00 38.03 3.07
695 723 6.432802 GAACAAACGTTCCATTAACACATG 57.567 37.500 0.00 0.00 37.42 3.21
707 735 1.947456 AGGAAGCTGGAACAAACGTTC 59.053 47.619 0.00 0.00 41.78 3.95
708 736 1.676006 CAGGAAGCTGGAACAAACGTT 59.324 47.619 0.00 0.00 38.70 3.99
709 737 1.308998 CAGGAAGCTGGAACAAACGT 58.691 50.000 0.00 0.00 38.70 3.99
710 738 1.002468 CACAGGAAGCTGGAACAAACG 60.002 52.381 0.00 0.00 38.70 3.60
711 739 1.338020 CCACAGGAAGCTGGAACAAAC 59.662 52.381 0.00 0.00 38.70 2.93
712 740 1.214175 TCCACAGGAAGCTGGAACAAA 59.786 47.619 0.00 0.00 38.70 2.83
713 741 0.843309 TCCACAGGAAGCTGGAACAA 59.157 50.000 0.00 0.00 38.70 2.83
714 742 0.397941 CTCCACAGGAAGCTGGAACA 59.602 55.000 0.00 0.00 36.09 3.18
715 743 0.957888 GCTCCACAGGAAGCTGGAAC 60.958 60.000 0.00 0.00 36.09 3.62
716 744 1.376466 GCTCCACAGGAAGCTGGAA 59.624 57.895 0.00 0.00 36.09 3.53
717 745 2.596851 GGCTCCACAGGAAGCTGGA 61.597 63.158 0.00 0.00 35.20 3.86
718 746 2.045536 GGCTCCACAGGAAGCTGG 60.046 66.667 0.00 0.00 0.00 4.85
719 747 0.615331 TAAGGCTCCACAGGAAGCTG 59.385 55.000 0.00 0.00 0.00 4.24
720 748 0.908198 CTAAGGCTCCACAGGAAGCT 59.092 55.000 0.00 0.00 0.00 3.74
721 749 0.746204 GCTAAGGCTCCACAGGAAGC 60.746 60.000 0.00 0.00 35.22 3.86
722 750 0.615331 TGCTAAGGCTCCACAGGAAG 59.385 55.000 0.00 0.00 39.59 3.46
723 751 0.324943 GTGCTAAGGCTCCACAGGAA 59.675 55.000 7.70 0.00 39.59 3.36
724 752 1.888436 CGTGCTAAGGCTCCACAGGA 61.888 60.000 11.68 0.00 39.59 3.86
725 753 1.448540 CGTGCTAAGGCTCCACAGG 60.449 63.158 11.68 2.47 39.59 4.00
726 754 0.737715 GTCGTGCTAAGGCTCCACAG 60.738 60.000 11.68 6.25 39.59 3.66
727 755 1.292223 GTCGTGCTAAGGCTCCACA 59.708 57.895 11.68 0.00 39.59 4.17
728 756 0.320421 TTGTCGTGCTAAGGCTCCAC 60.320 55.000 0.00 0.00 39.59 4.02
729 757 0.320421 GTTGTCGTGCTAAGGCTCCA 60.320 55.000 0.00 0.00 39.59 3.86
730 758 0.037232 AGTTGTCGTGCTAAGGCTCC 60.037 55.000 0.00 0.00 39.59 4.70
731 759 1.797025 AAGTTGTCGTGCTAAGGCTC 58.203 50.000 0.00 0.00 39.59 4.70
732 760 2.143925 GAAAGTTGTCGTGCTAAGGCT 58.856 47.619 0.00 0.00 39.59 4.58
733 761 1.136336 CGAAAGTTGTCGTGCTAAGGC 60.136 52.381 0.00 0.00 36.26 4.35
734 762 1.459592 CCGAAAGTTGTCGTGCTAAGG 59.540 52.381 6.68 0.00 39.43 2.69
735 763 2.155155 GTCCGAAAGTTGTCGTGCTAAG 59.845 50.000 6.68 0.00 39.43 2.18
736 764 2.129607 GTCCGAAAGTTGTCGTGCTAA 58.870 47.619 6.68 0.00 39.43 3.09
737 765 1.338973 AGTCCGAAAGTTGTCGTGCTA 59.661 47.619 6.68 0.00 39.43 3.49
738 766 0.104304 AGTCCGAAAGTTGTCGTGCT 59.896 50.000 6.68 2.87 39.43 4.40
739 767 0.232303 CAGTCCGAAAGTTGTCGTGC 59.768 55.000 6.68 0.00 39.43 5.34
740 768 1.521423 GACAGTCCGAAAGTTGTCGTG 59.479 52.381 0.00 2.73 39.43 4.35
741 769 1.407979 AGACAGTCCGAAAGTTGTCGT 59.592 47.619 0.00 0.00 43.48 4.34
742 770 2.135664 AGACAGTCCGAAAGTTGTCG 57.864 50.000 0.00 0.00 43.48 4.35
743 771 6.154445 TGTAATAGACAGTCCGAAAGTTGTC 58.846 40.000 0.00 0.00 40.08 3.18
744 772 6.092955 TGTAATAGACAGTCCGAAAGTTGT 57.907 37.500 0.00 0.00 32.86 3.32
745 773 6.422701 TGTTGTAATAGACAGTCCGAAAGTTG 59.577 38.462 0.00 0.00 39.88 3.16
746 774 6.518493 TGTTGTAATAGACAGTCCGAAAGTT 58.482 36.000 0.00 0.00 39.88 2.66
747 775 6.092955 TGTTGTAATAGACAGTCCGAAAGT 57.907 37.500 0.00 0.00 39.88 2.66
748 776 6.645415 ACTTGTTGTAATAGACAGTCCGAAAG 59.355 38.462 0.00 0.00 39.88 2.62
749 777 6.518493 ACTTGTTGTAATAGACAGTCCGAAA 58.482 36.000 0.00 0.00 39.88 3.46
750 778 6.092955 ACTTGTTGTAATAGACAGTCCGAA 57.907 37.500 0.00 0.00 39.88 4.30
751 779 5.717078 ACTTGTTGTAATAGACAGTCCGA 57.283 39.130 0.00 0.00 39.88 4.55
752 780 6.780706 AAACTTGTTGTAATAGACAGTCCG 57.219 37.500 0.00 0.00 39.88 4.79
753 781 8.403236 ACAAAAACTTGTTGTAATAGACAGTCC 58.597 33.333 0.00 0.00 39.88 3.85
754 782 9.783256 AACAAAAACTTGTTGTAATAGACAGTC 57.217 29.630 2.57 0.00 42.91 3.51
755 783 9.783256 GAACAAAAACTTGTTGTAATAGACAGT 57.217 29.630 7.91 0.00 44.37 3.55
756 784 9.233232 GGAACAAAAACTTGTTGTAATAGACAG 57.767 33.333 7.91 0.00 44.37 3.51
757 785 7.911205 CGGAACAAAAACTTGTTGTAATAGACA 59.089 33.333 7.91 0.00 44.37 3.41
758 786 7.096763 GCGGAACAAAAACTTGTTGTAATAGAC 60.097 37.037 7.91 0.00 44.37 2.59
759 787 6.913673 GCGGAACAAAAACTTGTTGTAATAGA 59.086 34.615 7.91 0.00 44.37 1.98
760 788 6.915843 AGCGGAACAAAAACTTGTTGTAATAG 59.084 34.615 7.91 0.00 44.37 1.73
761 789 6.797454 AGCGGAACAAAAACTTGTTGTAATA 58.203 32.000 7.91 0.00 44.37 0.98
762 790 5.656480 AGCGGAACAAAAACTTGTTGTAAT 58.344 33.333 7.91 0.00 44.37 1.89
763 791 5.061920 AGCGGAACAAAAACTTGTTGTAA 57.938 34.783 7.91 0.00 44.37 2.41
764 792 4.439016 GGAGCGGAACAAAAACTTGTTGTA 60.439 41.667 7.91 0.00 44.37 2.41
765 793 3.507786 GAGCGGAACAAAAACTTGTTGT 58.492 40.909 7.91 0.00 44.37 3.32
766 794 2.857748 GGAGCGGAACAAAAACTTGTTG 59.142 45.455 7.91 0.00 44.37 3.33
767 795 2.478879 CGGAGCGGAACAAAAACTTGTT 60.479 45.455 3.00 3.00 46.73 2.83
768 796 1.064952 CGGAGCGGAACAAAAACTTGT 59.935 47.619 0.00 0.00 36.59 3.16
769 797 1.753956 CGGAGCGGAACAAAAACTTG 58.246 50.000 0.00 0.00 0.00 3.16
782 810 1.446272 GTCTTTCCTCACCGGAGCG 60.446 63.158 9.46 0.00 44.28 5.03
783 811 1.079057 GGTCTTTCCTCACCGGAGC 60.079 63.158 9.46 0.00 44.28 4.70
784 812 0.905357 ATGGTCTTTCCTCACCGGAG 59.095 55.000 9.46 0.00 44.28 4.63
785 813 2.241281 TATGGTCTTTCCTCACCGGA 57.759 50.000 9.46 0.00 41.06 5.14
786 814 3.206150 CATTATGGTCTTTCCTCACCGG 58.794 50.000 0.00 0.00 35.15 5.28
787 815 3.206150 CCATTATGGTCTTTCCTCACCG 58.794 50.000 2.48 0.00 35.15 4.94
788 816 2.952310 GCCATTATGGTCTTTCCTCACC 59.048 50.000 13.28 0.00 40.46 4.02
789 817 2.614057 CGCCATTATGGTCTTTCCTCAC 59.386 50.000 13.28 0.00 40.46 3.51
790 818 2.917933 CGCCATTATGGTCTTTCCTCA 58.082 47.619 13.28 0.00 40.46 3.86
791 819 1.604278 GCGCCATTATGGTCTTTCCTC 59.396 52.381 13.28 0.00 40.46 3.71
792 820 1.680338 GCGCCATTATGGTCTTTCCT 58.320 50.000 13.28 0.00 40.46 3.36
793 821 0.668535 GGCGCCATTATGGTCTTTCC 59.331 55.000 24.80 3.78 40.46 3.13
794 822 0.307760 CGGCGCCATTATGGTCTTTC 59.692 55.000 28.98 0.00 40.46 2.62
795 823 1.724582 GCGGCGCCATTATGGTCTTT 61.725 55.000 28.98 0.00 40.46 2.52
796 824 2.186826 GCGGCGCCATTATGGTCTT 61.187 57.895 28.98 0.00 40.46 3.01
797 825 2.591715 GCGGCGCCATTATGGTCT 60.592 61.111 28.98 0.00 40.46 3.85
798 826 4.012895 CGCGGCGCCATTATGGTC 62.013 66.667 28.98 5.21 40.46 4.02
815 843 1.135944 GCAGTAAAGTGAGCCGAAAGC 60.136 52.381 0.00 0.00 44.25 3.51
816 844 2.417719 AGCAGTAAAGTGAGCCGAAAG 58.582 47.619 0.00 0.00 0.00 2.62
817 845 2.543777 AGCAGTAAAGTGAGCCGAAA 57.456 45.000 0.00 0.00 0.00 3.46
818 846 2.143122 CAAGCAGTAAAGTGAGCCGAA 58.857 47.619 0.00 0.00 0.00 4.30
819 847 1.070134 ACAAGCAGTAAAGTGAGCCGA 59.930 47.619 0.00 0.00 0.00 5.54
820 848 1.512926 ACAAGCAGTAAAGTGAGCCG 58.487 50.000 0.00 0.00 0.00 5.52
821 849 3.665190 ACTACAAGCAGTAAAGTGAGCC 58.335 45.455 0.00 0.00 30.92 4.70
822 850 4.307432 TGACTACAAGCAGTAAAGTGAGC 58.693 43.478 0.00 0.00 30.92 4.26
823 851 5.287274 CGATGACTACAAGCAGTAAAGTGAG 59.713 44.000 0.00 0.00 30.92 3.51
824 852 5.161358 CGATGACTACAAGCAGTAAAGTGA 58.839 41.667 0.00 0.00 30.92 3.41
825 853 4.201628 GCGATGACTACAAGCAGTAAAGTG 60.202 45.833 0.00 0.00 35.16 3.16
826 854 3.927142 GCGATGACTACAAGCAGTAAAGT 59.073 43.478 0.00 0.00 35.16 2.66
827 855 4.177026 AGCGATGACTACAAGCAGTAAAG 58.823 43.478 0.00 0.00 36.63 1.85
828 856 4.188247 AGCGATGACTACAAGCAGTAAA 57.812 40.909 0.00 0.00 36.63 2.01
829 857 3.868757 AGCGATGACTACAAGCAGTAA 57.131 42.857 0.00 0.00 36.63 2.24
830 858 3.315470 CCTAGCGATGACTACAAGCAGTA 59.685 47.826 0.00 0.00 36.63 2.74
831 859 2.099921 CCTAGCGATGACTACAAGCAGT 59.900 50.000 0.00 0.00 36.63 4.40
832 860 2.099921 ACCTAGCGATGACTACAAGCAG 59.900 50.000 0.00 0.00 36.63 4.24
833 861 2.100197 ACCTAGCGATGACTACAAGCA 58.900 47.619 0.00 0.00 36.63 3.91
834 862 2.464865 CACCTAGCGATGACTACAAGC 58.535 52.381 0.00 0.00 35.24 4.01
835 863 2.427453 ACCACCTAGCGATGACTACAAG 59.573 50.000 0.00 0.00 0.00 3.16
836 864 2.426024 GACCACCTAGCGATGACTACAA 59.574 50.000 0.00 0.00 0.00 2.41
837 865 2.022195 GACCACCTAGCGATGACTACA 58.978 52.381 0.00 0.00 0.00 2.74
838 866 2.299521 AGACCACCTAGCGATGACTAC 58.700 52.381 0.00 0.00 0.00 2.73
839 867 2.730934 AGACCACCTAGCGATGACTA 57.269 50.000 0.00 0.00 0.00 2.59
840 868 2.730934 TAGACCACCTAGCGATGACT 57.269 50.000 0.00 0.00 0.00 3.41
841 869 2.623889 ACATAGACCACCTAGCGATGAC 59.376 50.000 0.00 0.00 0.00 3.06
842 870 2.945456 ACATAGACCACCTAGCGATGA 58.055 47.619 0.00 0.00 0.00 2.92
843 871 4.702612 AGATACATAGACCACCTAGCGATG 59.297 45.833 0.00 0.00 0.00 3.84
844 872 4.702612 CAGATACATAGACCACCTAGCGAT 59.297 45.833 0.00 0.00 0.00 4.58
845 873 4.072839 CAGATACATAGACCACCTAGCGA 58.927 47.826 0.00 0.00 0.00 4.93
846 874 3.191581 CCAGATACATAGACCACCTAGCG 59.808 52.174 0.00 0.00 0.00 4.26
847 875 4.021894 CACCAGATACATAGACCACCTAGC 60.022 50.000 0.00 0.00 0.00 3.42
848 876 5.010112 CACACCAGATACATAGACCACCTAG 59.990 48.000 0.00 0.00 0.00 3.02
849 877 4.893524 CACACCAGATACATAGACCACCTA 59.106 45.833 0.00 0.00 0.00 3.08
850 878 3.706594 CACACCAGATACATAGACCACCT 59.293 47.826 0.00 0.00 0.00 4.00
851 879 3.704566 TCACACCAGATACATAGACCACC 59.295 47.826 0.00 0.00 0.00 4.61
852 880 5.537300 ATCACACCAGATACATAGACCAC 57.463 43.478 0.00 0.00 0.00 4.16
853 881 6.560003 AAATCACACCAGATACATAGACCA 57.440 37.500 0.00 0.00 0.00 4.02
854 882 7.865706 AAAAATCACACCAGATACATAGACC 57.134 36.000 0.00 0.00 0.00 3.85
870 898 9.937577 GCGAACACTAAAAATGATAAAAATCAC 57.062 29.630 0.00 0.00 32.79 3.06
871 899 9.906660 AGCGAACACTAAAAATGATAAAAATCA 57.093 25.926 0.00 0.00 34.73 2.57
874 902 9.393249 CAGAGCGAACACTAAAAATGATAAAAA 57.607 29.630 0.00 0.00 0.00 1.94
875 903 7.537306 GCAGAGCGAACACTAAAAATGATAAAA 59.463 33.333 0.00 0.00 0.00 1.52
876 904 7.021196 GCAGAGCGAACACTAAAAATGATAAA 58.979 34.615 0.00 0.00 0.00 1.40
877 905 6.403200 GGCAGAGCGAACACTAAAAATGATAA 60.403 38.462 0.00 0.00 0.00 1.75
878 906 5.064707 GGCAGAGCGAACACTAAAAATGATA 59.935 40.000 0.00 0.00 0.00 2.15
879 907 4.142600 GGCAGAGCGAACACTAAAAATGAT 60.143 41.667 0.00 0.00 0.00 2.45
880 908 3.188460 GGCAGAGCGAACACTAAAAATGA 59.812 43.478 0.00 0.00 0.00 2.57
881 909 3.189287 AGGCAGAGCGAACACTAAAAATG 59.811 43.478 0.00 0.00 0.00 2.32
882 910 3.189287 CAGGCAGAGCGAACACTAAAAAT 59.811 43.478 0.00 0.00 0.00 1.82
883 911 2.548057 CAGGCAGAGCGAACACTAAAAA 59.452 45.455 0.00 0.00 0.00 1.94
884 912 2.143122 CAGGCAGAGCGAACACTAAAA 58.857 47.619 0.00 0.00 0.00 1.52
885 913 1.343142 TCAGGCAGAGCGAACACTAAA 59.657 47.619 0.00 0.00 0.00 1.85
886 914 0.966179 TCAGGCAGAGCGAACACTAA 59.034 50.000 0.00 0.00 0.00 2.24
887 915 0.966179 TTCAGGCAGAGCGAACACTA 59.034 50.000 0.00 0.00 0.00 2.74
888 916 0.320247 CTTCAGGCAGAGCGAACACT 60.320 55.000 0.00 0.00 0.00 3.55
889 917 0.319900 TCTTCAGGCAGAGCGAACAC 60.320 55.000 0.00 0.00 0.00 3.32
890 918 0.610174 ATCTTCAGGCAGAGCGAACA 59.390 50.000 0.00 0.00 0.00 3.18
891 919 1.731720 AATCTTCAGGCAGAGCGAAC 58.268 50.000 0.00 0.00 0.00 3.95
892 920 3.610040 TTAATCTTCAGGCAGAGCGAA 57.390 42.857 0.00 0.00 0.00 4.70
893 921 3.827008 ATTAATCTTCAGGCAGAGCGA 57.173 42.857 0.00 0.00 0.00 4.93
894 922 4.876125 TCTATTAATCTTCAGGCAGAGCG 58.124 43.478 0.00 0.00 0.00 5.03
895 923 6.933521 TCAATCTATTAATCTTCAGGCAGAGC 59.066 38.462 0.00 0.00 0.00 4.09
896 924 8.899427 TTCAATCTATTAATCTTCAGGCAGAG 57.101 34.615 0.00 0.00 0.00 3.35
897 925 9.334947 CTTTCAATCTATTAATCTTCAGGCAGA 57.665 33.333 0.00 0.00 0.00 4.26
898 926 9.118300 ACTTTCAATCTATTAATCTTCAGGCAG 57.882 33.333 0.00 0.00 0.00 4.85
899 927 9.466497 AACTTTCAATCTATTAATCTTCAGGCA 57.534 29.630 0.00 0.00 0.00 4.75
936 964 3.119779 TCGCTGGAACAAACGTTCTTTTT 60.120 39.130 0.00 0.00 42.11 1.94
937 965 2.420722 TCGCTGGAACAAACGTTCTTTT 59.579 40.909 0.00 0.00 42.11 2.27
938 966 2.011222 TCGCTGGAACAAACGTTCTTT 58.989 42.857 0.00 0.00 42.11 2.52
939 967 1.658994 TCGCTGGAACAAACGTTCTT 58.341 45.000 0.00 0.00 42.11 2.52
940 968 1.658994 TTCGCTGGAACAAACGTTCT 58.341 45.000 0.00 0.00 42.11 3.01
941 969 2.461897 TTTCGCTGGAACAAACGTTC 57.538 45.000 0.00 0.00 41.78 3.95
942 970 2.923605 TTTTCGCTGGAACAAACGTT 57.076 40.000 0.00 0.00 38.70 3.99
943 971 2.420722 TCTTTTTCGCTGGAACAAACGT 59.579 40.909 0.00 0.00 38.70 3.99
944 972 3.059634 TCTTTTTCGCTGGAACAAACG 57.940 42.857 0.00 0.00 38.70 3.60
945 973 5.723951 GCTTTTCTTTTTCGCTGGAACAAAC 60.724 40.000 0.00 0.00 38.70 2.93
946 974 4.328712 GCTTTTCTTTTTCGCTGGAACAAA 59.671 37.500 0.00 0.00 38.70 2.83
947 975 3.862845 GCTTTTCTTTTTCGCTGGAACAA 59.137 39.130 0.00 0.00 38.70 2.83
948 976 3.443976 GCTTTTCTTTTTCGCTGGAACA 58.556 40.909 0.00 0.00 0.00 3.18
949 977 2.467673 CGCTTTTCTTTTTCGCTGGAAC 59.532 45.455 0.00 0.00 0.00 3.62
950 978 2.726633 CGCTTTTCTTTTTCGCTGGAA 58.273 42.857 0.00 0.00 0.00 3.53
951 979 1.599419 GCGCTTTTCTTTTTCGCTGGA 60.599 47.619 0.00 0.00 42.19 3.86
952 980 0.778223 GCGCTTTTCTTTTTCGCTGG 59.222 50.000 0.00 0.00 42.19 4.85
953 981 1.476074 TGCGCTTTTCTTTTTCGCTG 58.524 45.000 9.73 0.00 45.24 5.18
954 982 2.202295 TTGCGCTTTTCTTTTTCGCT 57.798 40.000 9.73 0.00 45.24 4.93
955 983 2.988807 TTTGCGCTTTTCTTTTTCGC 57.011 40.000 9.73 0.00 45.23 4.70
956 984 3.271752 GCTTTTGCGCTTTTCTTTTTCG 58.728 40.909 9.73 0.00 34.86 3.46
981 1009 2.026879 GAGAGAGGCCGATGCGAC 59.973 66.667 0.00 0.00 38.85 5.19
986 1014 2.444895 GGGTGGAGAGAGGCCGAT 60.445 66.667 0.00 0.00 0.00 4.18
1014 1042 4.332828 AGATAAGGTTGGGTAACAGTTGC 58.667 43.478 0.00 0.00 38.58 4.17
1057 1088 4.783621 GAGCGGCATGGCTGTGGA 62.784 66.667 18.09 0.00 44.93 4.02
1616 1663 3.131478 CATTCCGCCGAACACCCC 61.131 66.667 0.00 0.00 0.00 4.95
1647 1697 0.808453 GCTCGCCGTAACCATAAGCA 60.808 55.000 0.00 0.00 0.00 3.91
1650 1700 0.179094 CAGGCTCGCCGTAACCATAA 60.179 55.000 1.69 0.00 41.95 1.90
1724 1774 3.555139 GCTCGAATTGTCTTCATCTCCAG 59.445 47.826 0.00 0.00 0.00 3.86
1773 1823 5.176590 GTCGTCTGAATCAGAAATAGCATCC 59.823 44.000 15.28 0.00 42.46 3.51
1794 1844 0.863538 CAGCATCCTCTTCGTCGTCG 60.864 60.000 0.00 0.00 38.55 5.12
1795 1845 0.452184 TCAGCATCCTCTTCGTCGTC 59.548 55.000 0.00 0.00 0.00 4.20
1811 1861 3.066064 TCGTTGTTGGTGACCAAAATCAG 59.934 43.478 20.11 9.85 45.73 2.90
1829 1879 2.230508 TCTCGTCTTACCATTGCTCGTT 59.769 45.455 0.00 0.00 0.00 3.85
1837 1887 3.639094 CTCCTTCCATCTCGTCTTACCAT 59.361 47.826 0.00 0.00 0.00 3.55
1908 1958 0.549950 AGCCATGACCTCTCCAATGG 59.450 55.000 0.00 0.00 0.00 3.16
1911 1961 1.274703 GGGAGCCATGACCTCTCCAA 61.275 60.000 18.34 0.00 46.24 3.53
1926 1976 3.277715 GCCTTCTGAATCTGAAAGGGAG 58.722 50.000 10.79 0.00 0.00 4.30
1930 1980 2.079158 TGCGCCTTCTGAATCTGAAAG 58.921 47.619 4.18 0.00 0.00 2.62
1964 2014 1.004161 TGTCCGGCCATCTTTGATCAA 59.996 47.619 3.38 3.38 0.00 2.57
1978 2028 0.818296 CTCCCACTACTTCTGTCCGG 59.182 60.000 0.00 0.00 0.00 5.14
1980 2030 1.205893 CTGCTCCCACTACTTCTGTCC 59.794 57.143 0.00 0.00 0.00 4.02
2013 2063 2.751436 GGCTTCCATCTTGCGGCA 60.751 61.111 0.00 0.00 0.00 5.69
2046 2096 2.418976 GTCCTTTCCAATGGCGTTACTC 59.581 50.000 0.00 0.00 0.00 2.59
2061 2111 1.912971 GCCACCTATCCGGTCCTTT 59.087 57.895 0.00 0.00 44.93 3.11
2070 2120 2.552031 GAGAAAGAACCGCCACCTATC 58.448 52.381 0.00 0.00 0.00 2.08
2262 2312 4.141733 CCCCATTTTTGTTCCAGTTTGTCT 60.142 41.667 0.00 0.00 0.00 3.41
2276 2326 0.042581 ATTCCGGGCTCCCCATTTTT 59.957 50.000 0.00 0.00 45.83 1.94
2291 2341 3.892588 CTCACCTGGACTAGACCTATTCC 59.107 52.174 12.54 6.51 35.97 3.01
2379 2429 1.405526 CCATTGTGACCCCTCGTGTAG 60.406 57.143 0.00 0.00 0.00 2.74
2412 2462 1.135402 GCAAAGCCGTTACCAGATTGG 60.135 52.381 0.00 0.00 45.02 3.16
2475 2525 1.407851 CCATTGCTGCTCCTAGCTTCA 60.408 52.381 0.00 0.00 42.97 3.02
2521 2571 2.482142 CGCCACTCCTGAATCTACCTTC 60.482 54.545 0.00 0.00 0.00 3.46
2524 2574 0.105039 CCGCCACTCCTGAATCTACC 59.895 60.000 0.00 0.00 0.00 3.18
2541 2591 3.058160 CTTGCAGCCCCACTTCCG 61.058 66.667 0.00 0.00 0.00 4.30
2570 2620 3.243336 GTGTTCATCACAGGACGAGTAC 58.757 50.000 0.00 0.00 45.51 2.73
2590 2640 2.836981 CTCCTCCATCTTCTCTGTTGGT 59.163 50.000 0.00 0.00 0.00 3.67
2712 2762 0.994995 CTGATGTTGGTCGAAGCGAG 59.005 55.000 0.00 0.00 36.23 5.03
2715 2765 2.417719 AGTTCTGATGTTGGTCGAAGC 58.582 47.619 0.00 0.00 0.00 3.86
2718 2768 5.661056 ATCTAAGTTCTGATGTTGGTCGA 57.339 39.130 0.00 0.00 0.00 4.20
2743 2793 9.804758 AGCTTTACTCTTAACATACAGTACATC 57.195 33.333 0.00 0.00 0.00 3.06
2832 2882 1.394917 CTGAACGAAGCAAATCCTCCG 59.605 52.381 0.00 0.00 0.00 4.63
2875 2925 0.457443 TGATAGGCACTCACTCAGCG 59.543 55.000 0.00 0.00 41.75 5.18
2958 3009 6.932960 TCAGAAGATATTCATGTGGTGCATAG 59.067 38.462 2.42 0.00 35.74 2.23
3013 3064 7.103641 AGAAGAACACGATAGCCAGATTAAAA 58.896 34.615 0.00 0.00 42.67 1.52
3017 3068 4.744795 AGAAGAACACGATAGCCAGATT 57.255 40.909 0.00 0.00 42.67 2.40
3118 3169 7.437862 GGATCACACTCAGAAAAGATATCAGAC 59.562 40.741 5.32 0.00 0.00 3.51
3146 3197 3.007635 CAAGGATAAACAGGGTTCGGAC 58.992 50.000 0.00 0.00 0.00 4.79
3149 3200 3.127030 GCTTCAAGGATAAACAGGGTTCG 59.873 47.826 0.00 0.00 0.00 3.95
3151 3202 4.082125 CAGCTTCAAGGATAAACAGGGTT 58.918 43.478 0.00 0.00 0.00 4.11
3176 3227 3.245371 ACTCCAAAATTCTGCAGGGATGA 60.245 43.478 15.13 1.29 0.00 2.92
3214 3265 7.556275 TCACAGCCTCCGAATAAATTAAAAGAT 59.444 33.333 0.00 0.00 0.00 2.40
3230 3284 2.763448 ACTAGAATGAGTCACAGCCTCC 59.237 50.000 0.00 0.00 0.00 4.30
3299 3353 3.555586 CCATTTGGCAGAAAAACAGGAGG 60.556 47.826 0.00 0.00 0.00 4.30
3304 3358 5.606348 ACTTACCATTTGGCAGAAAAACA 57.394 34.783 0.00 0.00 39.32 2.83
3341 3395 8.959548 TGTGTAGATGCAGAATTATTTCATGTT 58.040 29.630 0.00 0.00 34.08 2.71
3349 3403 9.955102 ACATATGATGTGTAGATGCAGAATTAT 57.045 29.630 10.38 0.00 43.01 1.28
3351 3405 8.687292 AACATATGATGTGTAGATGCAGAATT 57.313 30.769 10.38 0.00 44.07 2.17
3352 3406 8.155510 AGAACATATGATGTGTAGATGCAGAAT 58.844 33.333 10.38 0.00 44.07 2.40
3382 3436 7.036220 ACATGACGGACAGATAAAGTTAGAAG 58.964 38.462 0.00 0.00 0.00 2.85
3383 3437 6.931838 ACATGACGGACAGATAAAGTTAGAA 58.068 36.000 0.00 0.00 0.00 2.10
3384 3438 6.525578 ACATGACGGACAGATAAAGTTAGA 57.474 37.500 0.00 0.00 0.00 2.10
3389 3443 7.133891 AGAAAAACATGACGGACAGATAAAG 57.866 36.000 0.00 0.00 0.00 1.85
3398 3452 3.882888 AGCAAGAAGAAAAACATGACGGA 59.117 39.130 0.00 0.00 0.00 4.69
3401 3455 4.362279 TGCAGCAAGAAGAAAAACATGAC 58.638 39.130 0.00 0.00 0.00 3.06
3404 3458 4.924305 TCTGCAGCAAGAAGAAAAACAT 57.076 36.364 9.47 0.00 0.00 2.71
3410 3464 3.489355 TCCAAATCTGCAGCAAGAAGAA 58.511 40.909 9.47 0.00 34.86 2.52
3411 3465 3.144657 TCCAAATCTGCAGCAAGAAGA 57.855 42.857 9.47 0.00 35.97 2.87
3412 3466 4.451629 AATCCAAATCTGCAGCAAGAAG 57.548 40.909 9.47 0.00 0.00 2.85
3439 3493 0.391661 TGAGCTGCTTCGGATGTTCC 60.392 55.000 2.53 0.00 0.00 3.62
3440 3494 0.723981 GTGAGCTGCTTCGGATGTTC 59.276 55.000 2.53 0.00 0.00 3.18
3441 3495 0.322975 AGTGAGCTGCTTCGGATGTT 59.677 50.000 2.53 0.00 0.00 2.71
3442 3496 0.390866 CAGTGAGCTGCTTCGGATGT 60.391 55.000 2.53 0.00 35.77 3.06
3443 3497 2.381109 CAGTGAGCTGCTTCGGATG 58.619 57.895 2.53 0.00 35.77 3.51
3444 3498 4.928398 CAGTGAGCTGCTTCGGAT 57.072 55.556 2.53 0.00 35.77 4.18
3454 3508 6.018343 GGAAGTTTCTGAATATAGCAGTGAGC 60.018 42.308 0.00 0.00 46.19 4.26
3455 3509 7.224362 CAGGAAGTTTCTGAATATAGCAGTGAG 59.776 40.741 5.06 0.00 34.36 3.51
3456 3510 7.044181 CAGGAAGTTTCTGAATATAGCAGTGA 58.956 38.462 5.06 0.00 34.36 3.41
3457 3511 7.044181 TCAGGAAGTTTCTGAATATAGCAGTG 58.956 38.462 11.69 0.00 38.20 3.66
3458 3512 7.187824 TCAGGAAGTTTCTGAATATAGCAGT 57.812 36.000 11.69 0.00 38.20 4.40
3468 3522 7.009179 AGATACACATTCAGGAAGTTTCTGA 57.991 36.000 9.99 9.99 39.24 3.27
3469 3523 7.678947 AAGATACACATTCAGGAAGTTTCTG 57.321 36.000 4.61 4.61 0.00 3.02
3470 3524 7.391833 GGAAAGATACACATTCAGGAAGTTTCT 59.608 37.037 0.00 0.00 0.00 2.52
3471 3525 7.391833 AGGAAAGATACACATTCAGGAAGTTTC 59.608 37.037 0.00 0.00 0.00 2.78
3472 3526 7.175641 CAGGAAAGATACACATTCAGGAAGTTT 59.824 37.037 0.00 0.00 0.00 2.66
3473 3527 6.656693 CAGGAAAGATACACATTCAGGAAGTT 59.343 38.462 0.00 0.00 0.00 2.66
3474 3528 6.176183 CAGGAAAGATACACATTCAGGAAGT 58.824 40.000 0.00 0.00 0.00 3.01
3475 3529 6.093219 CACAGGAAAGATACACATTCAGGAAG 59.907 42.308 0.00 0.00 0.00 3.46
3476 3530 5.939883 CACAGGAAAGATACACATTCAGGAA 59.060 40.000 0.00 0.00 0.00 3.36
3477 3531 5.013079 ACACAGGAAAGATACACATTCAGGA 59.987 40.000 0.00 0.00 0.00 3.86
3478 3532 5.122869 CACACAGGAAAGATACACATTCAGG 59.877 44.000 0.00 0.00 0.00 3.86
3479 3533 5.934043 TCACACAGGAAAGATACACATTCAG 59.066 40.000 0.00 0.00 0.00 3.02
3480 3534 5.863965 TCACACAGGAAAGATACACATTCA 58.136 37.500 0.00 0.00 0.00 2.57
3481 3535 6.820656 AGATCACACAGGAAAGATACACATTC 59.179 38.462 0.00 0.00 0.00 2.67
3482 3536 6.596888 CAGATCACACAGGAAAGATACACATT 59.403 38.462 0.00 0.00 0.00 2.71
3483 3537 6.070596 TCAGATCACACAGGAAAGATACACAT 60.071 38.462 0.00 0.00 0.00 3.21
3484 3538 5.245977 TCAGATCACACAGGAAAGATACACA 59.754 40.000 0.00 0.00 0.00 3.72
3485 3539 5.724328 TCAGATCACACAGGAAAGATACAC 58.276 41.667 0.00 0.00 0.00 2.90
3486 3540 6.382282 AGATCAGATCACACAGGAAAGATACA 59.618 38.462 13.14 0.00 0.00 2.29
3487 3541 6.700960 CAGATCAGATCACACAGGAAAGATAC 59.299 42.308 13.14 0.00 0.00 2.24
3488 3542 6.183360 CCAGATCAGATCACACAGGAAAGATA 60.183 42.308 13.14 0.00 0.00 1.98
3489 3543 5.396548 CCAGATCAGATCACACAGGAAAGAT 60.397 44.000 13.14 0.00 0.00 2.40
3490 3544 4.081254 CCAGATCAGATCACACAGGAAAGA 60.081 45.833 13.14 0.00 0.00 2.52
3491 3545 4.081254 TCCAGATCAGATCACACAGGAAAG 60.081 45.833 13.14 0.00 0.00 2.62
3492 3546 3.840078 TCCAGATCAGATCACACAGGAAA 59.160 43.478 13.14 0.00 0.00 3.13
3493 3547 3.196469 GTCCAGATCAGATCACACAGGAA 59.804 47.826 13.14 0.00 0.00 3.36
3494 3548 2.762887 GTCCAGATCAGATCACACAGGA 59.237 50.000 13.14 8.42 0.00 3.86
3495 3549 2.158986 GGTCCAGATCAGATCACACAGG 60.159 54.545 13.14 6.39 0.00 4.00
3496 3550 2.158986 GGGTCCAGATCAGATCACACAG 60.159 54.545 13.14 0.00 0.00 3.66
3497 3551 1.833630 GGGTCCAGATCAGATCACACA 59.166 52.381 13.14 0.00 0.00 3.72
3498 3552 1.833630 TGGGTCCAGATCAGATCACAC 59.166 52.381 13.14 4.09 0.00 3.82
3499 3553 2.113807 CTGGGTCCAGATCAGATCACA 58.886 52.381 13.14 1.49 46.30 3.58
3500 3554 1.202627 GCTGGGTCCAGATCAGATCAC 60.203 57.143 20.22 2.23 46.30 3.06
3501 3555 1.126488 GCTGGGTCCAGATCAGATCA 58.874 55.000 20.22 0.00 46.30 2.92
3502 3556 0.396060 GGCTGGGTCCAGATCAGATC 59.604 60.000 20.22 1.64 46.30 2.75
3503 3557 1.406065 CGGCTGGGTCCAGATCAGAT 61.406 60.000 20.22 0.00 46.30 2.90
3504 3558 2.060383 CGGCTGGGTCCAGATCAGA 61.060 63.158 20.22 0.00 46.30 3.27
3505 3559 2.503061 CGGCTGGGTCCAGATCAG 59.497 66.667 20.22 5.37 46.30 2.90
3506 3560 2.896677 ATCCGGCTGGGTCCAGATCA 62.897 60.000 20.22 1.62 46.30 2.92
3507 3561 1.700042 AATCCGGCTGGGTCCAGATC 61.700 60.000 20.22 10.20 46.30 2.75
3508 3562 1.281925 AAATCCGGCTGGGTCCAGAT 61.282 55.000 20.22 2.73 46.30 2.90
3509 3563 0.619255 TAAATCCGGCTGGGTCCAGA 60.619 55.000 20.22 0.30 46.30 3.86
3510 3564 0.463833 GTAAATCCGGCTGGGTCCAG 60.464 60.000 12.87 12.42 46.15 3.86
3511 3565 1.605453 GTAAATCCGGCTGGGTCCA 59.395 57.895 12.87 0.00 37.00 4.02
3512 3566 1.153025 GGTAAATCCGGCTGGGTCC 60.153 63.158 12.87 0.00 37.00 4.46
3513 3567 1.153025 GGGTAAATCCGGCTGGGTC 60.153 63.158 12.87 0.00 37.00 4.46
3514 3568 1.212250 AAGGGTAAATCCGGCTGGGT 61.212 55.000 12.87 0.00 37.00 4.51
3515 3569 0.751643 CAAGGGTAAATCCGGCTGGG 60.752 60.000 12.87 0.00 37.00 4.45
3516 3570 0.254747 TCAAGGGTAAATCCGGCTGG 59.745 55.000 4.71 4.71 37.00 4.85
3517 3571 2.122783 TTCAAGGGTAAATCCGGCTG 57.877 50.000 0.00 0.00 37.00 4.85
3518 3572 2.041216 AGTTTCAAGGGTAAATCCGGCT 59.959 45.455 0.00 0.00 37.00 5.52
3519 3573 2.163613 CAGTTTCAAGGGTAAATCCGGC 59.836 50.000 0.00 0.00 37.00 6.13
3520 3574 2.163613 GCAGTTTCAAGGGTAAATCCGG 59.836 50.000 0.00 0.00 37.00 5.14
3521 3575 2.817258 TGCAGTTTCAAGGGTAAATCCG 59.183 45.455 0.00 0.00 37.00 4.18
3522 3576 3.826729 AGTGCAGTTTCAAGGGTAAATCC 59.173 43.478 0.00 0.00 0.00 3.01
3523 3577 4.798574 CAGTGCAGTTTCAAGGGTAAATC 58.201 43.478 0.00 0.00 0.00 2.17
3524 3578 3.005791 GCAGTGCAGTTTCAAGGGTAAAT 59.994 43.478 11.09 0.00 0.00 1.40
3545 3599 5.011023 CCATAATCCAAAATTCTACAGGGGC 59.989 44.000 0.00 0.00 0.00 5.80
3546 3600 5.011023 GCCATAATCCAAAATTCTACAGGGG 59.989 44.000 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.