Multiple sequence alignment - TraesCS6B01G061600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G061600 chr6B 100.000 3222 0 0 1 3222 40798850 40795629 0.000000e+00 5951
1 TraesCS6B01G061600 chr6B 95.679 2476 54 4 623 3075 661538890 661541335 0.000000e+00 3930
2 TraesCS6B01G061600 chr6B 97.959 147 3 0 3076 3222 661544642 661544788 4.120000e-64 255
3 TraesCS6B01G061600 chr1B 97.488 2468 42 9 625 3075 668657475 668659939 0.000000e+00 4196
4 TraesCS6B01G061600 chr1B 97.365 2467 48 2 626 3075 364288249 364285783 0.000000e+00 4180
5 TraesCS6B01G061600 chr1B 96.307 2464 43 5 626 3072 460164087 460161655 0.000000e+00 4002
6 TraesCS6B01G061600 chr1B 96.063 2464 49 4 626 3072 544798310 544795878 0.000000e+00 3969
7 TraesCS6B01G061600 chr1B 97.959 147 3 0 3076 3222 544794377 544794231 4.120000e-64 255
8 TraesCS6B01G061600 chr1B 97.959 147 3 0 3076 3222 569433051 569433197 4.120000e-64 255
9 TraesCS6B01G061600 chr1B 97.279 147 4 0 3076 3222 448521001 448521147 1.920000e-62 250
10 TraesCS6B01G061600 chr1B 97.279 147 4 0 3076 3222 668663192 668663338 1.920000e-62 250
11 TraesCS6B01G061600 chr1B 97.279 147 3 1 3076 3222 460149844 460149699 6.900000e-62 248
12 TraesCS6B01G061600 chr5B 97.365 2467 48 2 626 3075 621306285 621303819 0.000000e+00 4180
13 TraesCS6B01G061600 chr5B 95.654 2485 71 11 625 3075 69031150 69033631 0.000000e+00 3956
14 TraesCS6B01G061600 chr5B 89.035 228 25 0 6 233 366024749 366024522 1.890000e-72 283
15 TraesCS6B01G061600 chr5B 97.959 147 3 0 3076 3222 621300587 621300441 4.120000e-64 255
16 TraesCS6B01G061600 chr7B 96.476 2469 37 5 626 3075 41046987 41049424 0.000000e+00 4032
17 TraesCS6B01G061600 chr7B 87.826 230 23 5 6 233 147601737 147601963 6.850000e-67 265
18 TraesCS6B01G061600 chr2B 96.144 2464 46 6 626 3072 69351989 69354420 0.000000e+00 3978
19 TraesCS6B01G061600 chr2B 95.739 2464 58 3 626 3072 23131089 23133522 0.000000e+00 3925
20 TraesCS6B01G061600 chr2B 88.158 228 26 1 6 233 508654881 508654655 1.470000e-68 270
21 TraesCS6B01G061600 chr2B 87.773 229 27 1 6 233 161919870 161920098 1.910000e-67 267
22 TraesCS6B01G061600 chr2B 97.279 147 4 0 3076 3222 23135070 23135216 1.920000e-62 250
23 TraesCS6B01G061600 chr4B 97.396 1882 24 4 627 2491 654074066 654072193 0.000000e+00 3181
24 TraesCS6B01G061600 chr4B 94.554 1469 61 4 1622 3075 657804378 657802914 0.000000e+00 2252
25 TraesCS6B01G061600 chr4B 97.959 147 3 0 3076 3222 654068370 654068224 4.120000e-64 255
26 TraesCS6B01G061600 chr4A 94.973 1472 51 7 1622 3075 521946302 521947768 0.000000e+00 2287
27 TraesCS6B01G061600 chr4A 87.577 974 85 16 626 1576 630836260 630837220 0.000000e+00 1096
28 TraesCS6B01G061600 chr5D 94.823 1468 51 8 1622 3072 408554232 408552773 0.000000e+00 2266
29 TraesCS6B01G061600 chr5D 91.111 1035 67 10 626 1640 430983990 430982961 0.000000e+00 1378
30 TraesCS6B01G061600 chr5D 81.930 1057 135 27 629 1640 459925475 459924430 0.000000e+00 843
31 TraesCS6B01G061600 chr5D 90.909 220 20 0 6 225 260115302 260115521 2.430000e-76 296
32 TraesCS6B01G061600 chr5D 87.719 228 26 2 6 233 410242702 410242477 6.850000e-67 265
33 TraesCS6B01G061600 chr7D 94.755 1468 56 6 1622 3072 92233440 92231977 0.000000e+00 2265
34 TraesCS6B01G061600 chr1D 94.633 1472 54 8 1622 3072 414450146 414448679 0.000000e+00 2257
35 TraesCS6B01G061600 chr1D 91.545 1029 55 13 626 1633 30073891 30072874 0.000000e+00 1389
36 TraesCS6B01G061600 chr1D 88.458 1031 85 18 623 1637 335412168 335413180 0.000000e+00 1214
37 TraesCS6B01G061600 chr6D 90.725 1035 71 10 626 1640 438338928 438337899 0.000000e+00 1356
38 TraesCS6B01G061600 chr6D 88.889 225 25 0 8 232 465425481 465425705 8.800000e-71 278
39 TraesCS6B01G061600 chr2D 89.469 1035 78 13 626 1640 7525689 7524666 0.000000e+00 1279
40 TraesCS6B01G061600 chr6A 86.708 963 84 16 626 1568 536665907 536666845 0.000000e+00 1029
41 TraesCS6B01G061600 chr6A 93.023 129 9 0 3076 3204 162660302 162660430 4.240000e-44 189
42 TraesCS6B01G061600 chr3D 88.261 230 27 0 6 235 67551253 67551482 3.170000e-70 276
43 TraesCS6B01G061600 chrUn 89.091 220 24 0 6 225 190744896 190744677 1.140000e-69 274


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G061600 chr6B 40795629 40798850 3221 True 5951.0 5951 100.0000 1 3222 1 chr6B.!!$R1 3221
1 TraesCS6B01G061600 chr6B 661538890 661544788 5898 False 2092.5 3930 96.8190 623 3222 2 chr6B.!!$F1 2599
2 TraesCS6B01G061600 chr1B 364285783 364288249 2466 True 4180.0 4180 97.3650 626 3075 1 chr1B.!!$R1 2449
3 TraesCS6B01G061600 chr1B 460161655 460164087 2432 True 4002.0 4002 96.3070 626 3072 1 chr1B.!!$R3 2446
4 TraesCS6B01G061600 chr1B 668657475 668663338 5863 False 2223.0 4196 97.3835 625 3222 2 chr1B.!!$F3 2597
5 TraesCS6B01G061600 chr1B 544794231 544798310 4079 True 2112.0 3969 97.0110 626 3222 2 chr1B.!!$R4 2596
6 TraesCS6B01G061600 chr5B 69031150 69033631 2481 False 3956.0 3956 95.6540 625 3075 1 chr5B.!!$F1 2450
7 TraesCS6B01G061600 chr5B 621300441 621306285 5844 True 2217.5 4180 97.6620 626 3222 2 chr5B.!!$R2 2596
8 TraesCS6B01G061600 chr7B 41046987 41049424 2437 False 4032.0 4032 96.4760 626 3075 1 chr7B.!!$F1 2449
9 TraesCS6B01G061600 chr2B 69351989 69354420 2431 False 3978.0 3978 96.1440 626 3072 1 chr2B.!!$F1 2446
10 TraesCS6B01G061600 chr2B 23131089 23135216 4127 False 2087.5 3925 96.5090 626 3222 2 chr2B.!!$F3 2596
11 TraesCS6B01G061600 chr4B 657802914 657804378 1464 True 2252.0 2252 94.5540 1622 3075 1 chr4B.!!$R1 1453
12 TraesCS6B01G061600 chr4B 654068224 654074066 5842 True 1718.0 3181 97.6775 627 3222 2 chr4B.!!$R2 2595
13 TraesCS6B01G061600 chr4A 521946302 521947768 1466 False 2287.0 2287 94.9730 1622 3075 1 chr4A.!!$F1 1453
14 TraesCS6B01G061600 chr4A 630836260 630837220 960 False 1096.0 1096 87.5770 626 1576 1 chr4A.!!$F2 950
15 TraesCS6B01G061600 chr5D 408552773 408554232 1459 True 2266.0 2266 94.8230 1622 3072 1 chr5D.!!$R1 1450
16 TraesCS6B01G061600 chr5D 430982961 430983990 1029 True 1378.0 1378 91.1110 626 1640 1 chr5D.!!$R3 1014
17 TraesCS6B01G061600 chr5D 459924430 459925475 1045 True 843.0 843 81.9300 629 1640 1 chr5D.!!$R4 1011
18 TraesCS6B01G061600 chr7D 92231977 92233440 1463 True 2265.0 2265 94.7550 1622 3072 1 chr7D.!!$R1 1450
19 TraesCS6B01G061600 chr1D 414448679 414450146 1467 True 2257.0 2257 94.6330 1622 3072 1 chr1D.!!$R2 1450
20 TraesCS6B01G061600 chr1D 30072874 30073891 1017 True 1389.0 1389 91.5450 626 1633 1 chr1D.!!$R1 1007
21 TraesCS6B01G061600 chr1D 335412168 335413180 1012 False 1214.0 1214 88.4580 623 1637 1 chr1D.!!$F1 1014
22 TraesCS6B01G061600 chr6D 438337899 438338928 1029 True 1356.0 1356 90.7250 626 1640 1 chr6D.!!$R1 1014
23 TraesCS6B01G061600 chr2D 7524666 7525689 1023 True 1279.0 1279 89.4690 626 1640 1 chr2D.!!$R1 1014
24 TraesCS6B01G061600 chr6A 536665907 536666845 938 False 1029.0 1029 86.7080 626 1568 1 chr6A.!!$F2 942

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
327 328 0.031616 TGGGGCTTTGGAAGTGGTTT 60.032 50.0 0.0 0.0 0.0 3.27 F
427 428 0.035152 TGATGGCTCGATTTGGTGCT 60.035 50.0 0.0 0.0 0.0 4.40 F
429 430 0.035152 ATGGCTCGATTTGGTGCTGA 60.035 50.0 0.0 0.0 0.0 4.26 F
585 586 0.036010 CTTGTGGGCTGAGGTAGGTG 60.036 60.0 0.0 0.0 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1478 1577 1.133668 GGACTGGGCAGCCATAGAAAT 60.134 52.381 15.19 0.00 0.0 2.17 R
1847 1960 5.818857 ACTCAATGCAAAGCTTGTCATTTTT 59.181 32.000 18.39 7.71 36.2 1.94 R
2058 2187 6.156949 AGCCTTCCTAGTGTTCTTGATGATAA 59.843 38.462 0.00 0.00 0.0 1.75 R
2582 2802 1.474330 CCTAGGGTTGCATTTGGTCC 58.526 55.000 0.00 0.00 0.0 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 3.124921 CCAACCACCGCCGTGATC 61.125 66.667 6.77 0.00 43.14 2.92
49 50 3.124921 CAACCACCGCCGTGATCC 61.125 66.667 6.77 0.00 43.14 3.36
50 51 3.632080 AACCACCGCCGTGATCCA 61.632 61.111 6.77 0.00 43.14 3.41
51 52 3.894547 AACCACCGCCGTGATCCAC 62.895 63.158 6.77 0.00 43.14 4.02
59 60 4.386951 CGTGATCCACCCGTGCCA 62.387 66.667 0.00 0.00 0.00 4.92
60 61 2.436646 GTGATCCACCCGTGCCAG 60.437 66.667 0.00 0.00 0.00 4.85
61 62 2.606213 TGATCCACCCGTGCCAGA 60.606 61.111 0.00 0.00 0.00 3.86
62 63 1.995066 TGATCCACCCGTGCCAGAT 60.995 57.895 0.00 0.00 0.00 2.90
63 64 1.227674 GATCCACCCGTGCCAGATC 60.228 63.158 0.00 0.00 0.00 2.75
64 65 2.666596 GATCCACCCGTGCCAGATCC 62.667 65.000 0.00 0.00 0.00 3.36
65 66 3.716195 CCACCCGTGCCAGATCCA 61.716 66.667 0.00 0.00 0.00 3.41
66 67 2.124983 CACCCGTGCCAGATCCAG 60.125 66.667 0.00 0.00 0.00 3.86
67 68 4.101448 ACCCGTGCCAGATCCAGC 62.101 66.667 0.00 0.00 0.00 4.85
68 69 4.100084 CCCGTGCCAGATCCAGCA 62.100 66.667 3.23 3.23 36.44 4.41
69 70 2.046023 CCGTGCCAGATCCAGCAA 60.046 61.111 8.72 0.00 41.48 3.91
70 71 2.110967 CCGTGCCAGATCCAGCAAG 61.111 63.158 8.72 10.46 41.48 4.01
71 72 2.758089 CGTGCCAGATCCAGCAAGC 61.758 63.158 8.72 0.00 41.48 4.01
72 73 2.044650 TGCCAGATCCAGCAAGCC 60.045 61.111 4.84 0.00 35.69 4.35
73 74 3.207669 GCCAGATCCAGCAAGCCG 61.208 66.667 0.00 0.00 0.00 5.52
74 75 2.270205 CCAGATCCAGCAAGCCGT 59.730 61.111 0.00 0.00 0.00 5.68
75 76 2.110967 CCAGATCCAGCAAGCCGTG 61.111 63.158 0.00 0.00 0.00 4.94
76 77 2.110967 CAGATCCAGCAAGCCGTGG 61.111 63.158 0.00 0.00 34.87 4.94
77 78 2.825836 GATCCAGCAAGCCGTGGG 60.826 66.667 1.14 0.00 34.27 4.61
78 79 3.329542 GATCCAGCAAGCCGTGGGA 62.330 63.158 1.14 0.00 34.27 4.37
79 80 3.335356 ATCCAGCAAGCCGTGGGAG 62.335 63.158 1.14 0.00 34.27 4.30
80 81 4.020617 CCAGCAAGCCGTGGGAGA 62.021 66.667 0.00 0.00 0.00 3.71
81 82 2.032528 CAGCAAGCCGTGGGAGAA 59.967 61.111 0.00 0.00 0.00 2.87
82 83 2.037136 CAGCAAGCCGTGGGAGAAG 61.037 63.158 0.00 0.00 0.00 2.85
83 84 2.217038 AGCAAGCCGTGGGAGAAGA 61.217 57.895 0.00 0.00 0.00 2.87
84 85 1.743252 GCAAGCCGTGGGAGAAGAG 60.743 63.158 0.00 0.00 0.00 2.85
85 86 1.975327 CAAGCCGTGGGAGAAGAGA 59.025 57.895 0.00 0.00 0.00 3.10
86 87 0.539051 CAAGCCGTGGGAGAAGAGAT 59.461 55.000 0.00 0.00 0.00 2.75
87 88 0.827368 AAGCCGTGGGAGAAGAGATC 59.173 55.000 0.00 0.00 0.00 2.75
88 89 1.045911 AGCCGTGGGAGAAGAGATCC 61.046 60.000 0.00 0.00 35.99 3.36
94 95 1.443828 GGAGAAGAGATCCCACCGC 59.556 63.158 0.00 0.00 0.00 5.68
95 96 1.443828 GAGAAGAGATCCCACCGCC 59.556 63.158 0.00 0.00 0.00 6.13
96 97 2.034048 GAGAAGAGATCCCACCGCCC 62.034 65.000 0.00 0.00 0.00 6.13
97 98 3.090532 AAGAGATCCCACCGCCCC 61.091 66.667 0.00 0.00 0.00 5.80
119 120 4.717313 GTCGGCCGGGCTTTTCCT 62.717 66.667 27.83 0.00 34.39 3.36
120 121 4.715523 TCGGCCGGGCTTTTCCTG 62.716 66.667 27.83 8.55 41.11 3.86
125 126 3.373565 CGGGCTTTTCCTGGTGGC 61.374 66.667 0.00 0.00 37.58 5.01
126 127 2.203625 GGGCTTTTCCTGGTGGCA 60.204 61.111 0.00 0.00 34.39 4.92
127 128 2.574018 GGGCTTTTCCTGGTGGCAC 61.574 63.158 9.70 9.70 34.39 5.01
128 129 1.832167 GGCTTTTCCTGGTGGCACA 60.832 57.895 20.82 4.78 0.00 4.57
152 153 3.898509 CGGCAGCGAGGAGGAGAG 61.899 72.222 0.00 0.00 0.00 3.20
153 154 3.535962 GGCAGCGAGGAGGAGAGG 61.536 72.222 0.00 0.00 0.00 3.69
154 155 2.757917 GCAGCGAGGAGGAGAGGT 60.758 66.667 0.00 0.00 0.00 3.85
155 156 2.781158 GCAGCGAGGAGGAGAGGTC 61.781 68.421 0.00 0.00 0.00 3.85
156 157 2.124487 AGCGAGGAGGAGAGGTCG 60.124 66.667 0.00 0.00 35.51 4.79
157 158 3.213402 GCGAGGAGGAGAGGTCGG 61.213 72.222 0.00 0.00 32.99 4.79
158 159 2.517402 CGAGGAGGAGAGGTCGGG 60.517 72.222 0.00 0.00 0.00 5.14
159 160 2.123640 GAGGAGGAGAGGTCGGGG 60.124 72.222 0.00 0.00 0.00 5.73
160 161 3.742248 GAGGAGGAGAGGTCGGGGG 62.742 73.684 0.00 0.00 0.00 5.40
161 162 3.752167 GGAGGAGAGGTCGGGGGA 61.752 72.222 0.00 0.00 0.00 4.81
162 163 2.123640 GAGGAGAGGTCGGGGGAG 60.124 72.222 0.00 0.00 0.00 4.30
163 164 3.742248 GAGGAGAGGTCGGGGGAGG 62.742 73.684 0.00 0.00 0.00 4.30
164 165 4.862823 GGAGAGGTCGGGGGAGGG 62.863 77.778 0.00 0.00 0.00 4.30
165 166 3.752167 GAGAGGTCGGGGGAGGGA 61.752 72.222 0.00 0.00 0.00 4.20
166 167 4.077180 AGAGGTCGGGGGAGGGAC 62.077 72.222 0.00 0.00 0.00 4.46
172 173 4.541648 CGGGGGAGGGACGAGGAT 62.542 72.222 0.00 0.00 0.00 3.24
173 174 2.844839 GGGGGAGGGACGAGGATG 60.845 72.222 0.00 0.00 0.00 3.51
174 175 3.551407 GGGGAGGGACGAGGATGC 61.551 72.222 0.00 0.00 0.00 3.91
175 176 3.917760 GGGAGGGACGAGGATGCG 61.918 72.222 0.00 0.00 37.29 4.73
176 177 3.917760 GGAGGGACGAGGATGCGG 61.918 72.222 0.00 0.00 35.12 5.69
177 178 2.833582 GAGGGACGAGGATGCGGA 60.834 66.667 0.00 0.00 35.12 5.54
178 179 2.835431 AGGGACGAGGATGCGGAG 60.835 66.667 0.00 0.00 35.12 4.63
179 180 3.917760 GGGACGAGGATGCGGAGG 61.918 72.222 0.00 0.00 35.12 4.30
180 181 4.593864 GGACGAGGATGCGGAGGC 62.594 72.222 0.00 0.00 40.52 4.70
181 182 4.933064 GACGAGGATGCGGAGGCG 62.933 72.222 0.00 0.00 44.10 5.52
184 185 3.606662 GAGGATGCGGAGGCGCTA 61.607 66.667 7.64 0.00 44.10 4.26
185 186 3.565910 GAGGATGCGGAGGCGCTAG 62.566 68.421 7.64 0.00 44.10 3.42
186 187 4.671569 GGATGCGGAGGCGCTAGG 62.672 72.222 7.64 0.00 44.10 3.02
187 188 4.671569 GATGCGGAGGCGCTAGGG 62.672 72.222 7.64 1.65 44.10 3.53
190 191 4.893601 GCGGAGGCGCTAGGGTTC 62.894 72.222 7.64 6.76 0.00 3.62
191 192 4.222847 CGGAGGCGCTAGGGTTCC 62.223 72.222 7.64 17.12 0.00 3.62
192 193 3.862991 GGAGGCGCTAGGGTTCCC 61.863 72.222 7.64 0.00 0.00 3.97
193 194 3.862991 GAGGCGCTAGGGTTCCCC 61.863 72.222 7.64 0.95 45.90 4.81
228 229 4.508128 GCGACGCGGGAGGATTCA 62.508 66.667 12.47 0.00 0.00 2.57
229 230 2.278857 CGACGCGGGAGGATTCAG 60.279 66.667 12.47 0.00 0.00 3.02
230 231 2.107141 GACGCGGGAGGATTCAGG 59.893 66.667 12.47 0.00 0.00 3.86
231 232 2.363795 ACGCGGGAGGATTCAGGA 60.364 61.111 12.47 0.00 0.00 3.86
232 233 2.356818 GACGCGGGAGGATTCAGGAG 62.357 65.000 12.47 0.00 0.00 3.69
233 234 2.127869 CGCGGGAGGATTCAGGAGA 61.128 63.158 0.00 0.00 0.00 3.71
234 235 1.467678 CGCGGGAGGATTCAGGAGAT 61.468 60.000 0.00 0.00 0.00 2.75
235 236 0.761802 GCGGGAGGATTCAGGAGATT 59.238 55.000 0.00 0.00 0.00 2.40
236 237 1.971357 GCGGGAGGATTCAGGAGATTA 59.029 52.381 0.00 0.00 0.00 1.75
237 238 2.569404 GCGGGAGGATTCAGGAGATTAT 59.431 50.000 0.00 0.00 0.00 1.28
238 239 3.618507 GCGGGAGGATTCAGGAGATTATG 60.619 52.174 0.00 0.00 0.00 1.90
239 240 3.580458 CGGGAGGATTCAGGAGATTATGT 59.420 47.826 0.00 0.00 0.00 2.29
240 241 4.040952 CGGGAGGATTCAGGAGATTATGTT 59.959 45.833 0.00 0.00 0.00 2.71
241 242 5.312079 GGGAGGATTCAGGAGATTATGTTG 58.688 45.833 0.00 0.00 0.00 3.33
242 243 5.163152 GGGAGGATTCAGGAGATTATGTTGT 60.163 44.000 0.00 0.00 0.00 3.32
243 244 6.360618 GGAGGATTCAGGAGATTATGTTGTT 58.639 40.000 0.00 0.00 0.00 2.83
244 245 6.830838 GGAGGATTCAGGAGATTATGTTGTTT 59.169 38.462 0.00 0.00 0.00 2.83
245 246 7.201767 GGAGGATTCAGGAGATTATGTTGTTTG 60.202 40.741 0.00 0.00 0.00 2.93
246 247 6.096001 AGGATTCAGGAGATTATGTTGTTTGC 59.904 38.462 0.00 0.00 0.00 3.68
247 248 6.127647 GGATTCAGGAGATTATGTTGTTTGCA 60.128 38.462 0.00 0.00 0.00 4.08
248 249 6.839124 TTCAGGAGATTATGTTGTTTGCAT 57.161 33.333 0.00 0.00 0.00 3.96
249 250 7.936496 TTCAGGAGATTATGTTGTTTGCATA 57.064 32.000 0.00 0.00 0.00 3.14
250 251 7.936496 TCAGGAGATTATGTTGTTTGCATAA 57.064 32.000 0.00 0.00 41.30 1.90
251 252 7.761409 TCAGGAGATTATGTTGTTTGCATAAC 58.239 34.615 0.00 0.00 40.31 1.89
252 253 7.392953 TCAGGAGATTATGTTGTTTGCATAACA 59.607 33.333 12.24 12.24 40.31 2.41
253 254 8.192774 CAGGAGATTATGTTGTTTGCATAACAT 58.807 33.333 20.86 20.86 46.14 2.71
254 255 9.407380 AGGAGATTATGTTGTTTGCATAACATA 57.593 29.630 19.42 19.42 43.54 2.29
255 256 9.669353 GGAGATTATGTTGTTTGCATAACATAG 57.331 33.333 20.97 0.00 45.29 2.23
258 259 9.236691 GATTATGTTGTTTGCATAACATAGTGG 57.763 33.333 20.96 0.00 45.29 4.00
259 260 6.588719 ATGTTGTTTGCATAACATAGTGGT 57.411 33.333 17.63 0.80 43.54 4.16
260 261 5.767269 TGTTGTTTGCATAACATAGTGGTG 58.233 37.500 12.95 0.00 32.30 4.17
261 262 5.300539 TGTTGTTTGCATAACATAGTGGTGT 59.699 36.000 12.95 0.00 32.30 4.16
262 263 5.621197 TGTTTGCATAACATAGTGGTGTC 57.379 39.130 9.46 0.00 0.00 3.67
263 264 5.312895 TGTTTGCATAACATAGTGGTGTCT 58.687 37.500 9.46 0.00 0.00 3.41
264 265 5.767665 TGTTTGCATAACATAGTGGTGTCTT 59.232 36.000 9.46 0.00 0.00 3.01
265 266 6.072728 TGTTTGCATAACATAGTGGTGTCTTC 60.073 38.462 9.46 0.00 0.00 2.87
266 267 4.180817 TGCATAACATAGTGGTGTCTTCG 58.819 43.478 0.00 0.00 0.00 3.79
267 268 4.181578 GCATAACATAGTGGTGTCTTCGT 58.818 43.478 0.00 0.00 0.00 3.85
268 269 4.630069 GCATAACATAGTGGTGTCTTCGTT 59.370 41.667 0.00 0.00 0.00 3.85
269 270 5.121768 GCATAACATAGTGGTGTCTTCGTTT 59.878 40.000 0.00 0.00 0.00 3.60
270 271 6.534059 CATAACATAGTGGTGTCTTCGTTTG 58.466 40.000 0.00 0.00 0.00 2.93
271 272 4.067972 ACATAGTGGTGTCTTCGTTTGT 57.932 40.909 0.00 0.00 0.00 2.83
272 273 4.448210 ACATAGTGGTGTCTTCGTTTGTT 58.552 39.130 0.00 0.00 0.00 2.83
273 274 4.879545 ACATAGTGGTGTCTTCGTTTGTTT 59.120 37.500 0.00 0.00 0.00 2.83
274 275 5.007332 ACATAGTGGTGTCTTCGTTTGTTTC 59.993 40.000 0.00 0.00 0.00 2.78
275 276 3.340034 AGTGGTGTCTTCGTTTGTTTCA 58.660 40.909 0.00 0.00 0.00 2.69
276 277 3.945285 AGTGGTGTCTTCGTTTGTTTCAT 59.055 39.130 0.00 0.00 0.00 2.57
277 278 4.398044 AGTGGTGTCTTCGTTTGTTTCATT 59.602 37.500 0.00 0.00 0.00 2.57
278 279 5.587043 AGTGGTGTCTTCGTTTGTTTCATTA 59.413 36.000 0.00 0.00 0.00 1.90
279 280 6.094325 AGTGGTGTCTTCGTTTGTTTCATTAA 59.906 34.615 0.00 0.00 0.00 1.40
280 281 6.915843 GTGGTGTCTTCGTTTGTTTCATTAAT 59.084 34.615 0.00 0.00 0.00 1.40
281 282 7.434013 GTGGTGTCTTCGTTTGTTTCATTAATT 59.566 33.333 0.00 0.00 0.00 1.40
282 283 7.433719 TGGTGTCTTCGTTTGTTTCATTAATTG 59.566 33.333 0.00 0.00 0.00 2.32
283 284 7.273659 GTGTCTTCGTTTGTTTCATTAATTGC 58.726 34.615 0.00 0.00 0.00 3.56
284 285 7.167468 GTGTCTTCGTTTGTTTCATTAATTGCT 59.833 33.333 0.00 0.00 0.00 3.91
285 286 8.346300 TGTCTTCGTTTGTTTCATTAATTGCTA 58.654 29.630 0.00 0.00 0.00 3.49
286 287 8.840867 GTCTTCGTTTGTTTCATTAATTGCTAG 58.159 33.333 0.00 0.00 0.00 3.42
287 288 8.779303 TCTTCGTTTGTTTCATTAATTGCTAGA 58.221 29.630 0.00 0.00 0.00 2.43
288 289 9.559958 CTTCGTTTGTTTCATTAATTGCTAGAT 57.440 29.630 0.00 0.00 0.00 1.98
290 291 9.982291 TCGTTTGTTTCATTAATTGCTAGATAC 57.018 29.630 0.00 0.00 0.00 2.24
291 292 9.767684 CGTTTGTTTCATTAATTGCTAGATACA 57.232 29.630 0.00 0.00 0.00 2.29
311 312 8.258007 AGATACATATATAATCGTGGTTGTGGG 58.742 37.037 0.00 0.00 0.00 4.61
312 313 5.556915 ACATATATAATCGTGGTTGTGGGG 58.443 41.667 0.00 0.00 0.00 4.96
313 314 2.335316 TATAATCGTGGTTGTGGGGC 57.665 50.000 0.00 0.00 0.00 5.80
314 315 0.623723 ATAATCGTGGTTGTGGGGCT 59.376 50.000 0.00 0.00 0.00 5.19
315 316 0.402504 TAATCGTGGTTGTGGGGCTT 59.597 50.000 0.00 0.00 0.00 4.35
316 317 0.469144 AATCGTGGTTGTGGGGCTTT 60.469 50.000 0.00 0.00 0.00 3.51
317 318 1.178534 ATCGTGGTTGTGGGGCTTTG 61.179 55.000 0.00 0.00 0.00 2.77
318 319 2.855514 CGTGGTTGTGGGGCTTTGG 61.856 63.158 0.00 0.00 0.00 3.28
319 320 1.456705 GTGGTTGTGGGGCTTTGGA 60.457 57.895 0.00 0.00 0.00 3.53
320 321 1.045911 GTGGTTGTGGGGCTTTGGAA 61.046 55.000 0.00 0.00 0.00 3.53
321 322 0.758685 TGGTTGTGGGGCTTTGGAAG 60.759 55.000 0.00 0.00 0.00 3.46
322 323 0.759060 GGTTGTGGGGCTTTGGAAGT 60.759 55.000 0.00 0.00 0.00 3.01
323 324 0.389025 GTTGTGGGGCTTTGGAAGTG 59.611 55.000 0.00 0.00 0.00 3.16
324 325 0.758685 TTGTGGGGCTTTGGAAGTGG 60.759 55.000 0.00 0.00 0.00 4.00
325 326 1.152546 GTGGGGCTTTGGAAGTGGT 60.153 57.895 0.00 0.00 0.00 4.16
326 327 0.759060 GTGGGGCTTTGGAAGTGGTT 60.759 55.000 0.00 0.00 0.00 3.67
327 328 0.031616 TGGGGCTTTGGAAGTGGTTT 60.032 50.000 0.00 0.00 0.00 3.27
328 329 0.392706 GGGGCTTTGGAAGTGGTTTG 59.607 55.000 0.00 0.00 0.00 2.93
329 330 0.249868 GGGCTTTGGAAGTGGTTTGC 60.250 55.000 0.00 0.00 0.00 3.68
330 331 0.463620 GGCTTTGGAAGTGGTTTGCA 59.536 50.000 0.00 0.00 35.10 4.08
331 332 1.538849 GGCTTTGGAAGTGGTTTGCAG 60.539 52.381 0.00 0.00 38.43 4.41
332 333 1.538849 GCTTTGGAAGTGGTTTGCAGG 60.539 52.381 0.00 0.00 38.43 4.85
333 334 1.069049 CTTTGGAAGTGGTTTGCAGGG 59.931 52.381 0.00 0.00 38.43 4.45
334 335 0.758685 TTGGAAGTGGTTTGCAGGGG 60.759 55.000 0.00 0.00 38.43 4.79
335 336 1.152546 GGAAGTGGTTTGCAGGGGT 60.153 57.895 0.00 0.00 0.00 4.95
336 337 0.759060 GGAAGTGGTTTGCAGGGGTT 60.759 55.000 0.00 0.00 0.00 4.11
337 338 0.673985 GAAGTGGTTTGCAGGGGTTC 59.326 55.000 0.00 0.00 0.00 3.62
338 339 1.106944 AAGTGGTTTGCAGGGGTTCG 61.107 55.000 0.00 0.00 0.00 3.95
339 340 2.909965 TGGTTTGCAGGGGTTCGC 60.910 61.111 0.00 0.00 0.00 4.70
340 341 3.680786 GGTTTGCAGGGGTTCGCC 61.681 66.667 0.00 0.00 0.00 5.54
341 342 4.038080 GTTTGCAGGGGTTCGCCG 62.038 66.667 0.41 0.00 38.45 6.46
358 359 3.453559 CGGTGCCGGATTCTTAGTT 57.546 52.632 5.05 0.00 35.56 2.24
359 360 1.287425 CGGTGCCGGATTCTTAGTTC 58.713 55.000 5.05 0.00 35.56 3.01
360 361 1.287425 GGTGCCGGATTCTTAGTTCG 58.713 55.000 5.05 0.00 0.00 3.95
361 362 1.287425 GTGCCGGATTCTTAGTTCGG 58.713 55.000 5.05 0.00 43.13 4.30
362 363 1.134907 GTGCCGGATTCTTAGTTCGGA 60.135 52.381 5.05 0.00 42.94 4.55
363 364 1.760613 TGCCGGATTCTTAGTTCGGAT 59.239 47.619 5.05 0.00 42.94 4.18
364 365 2.135933 GCCGGATTCTTAGTTCGGATG 58.864 52.381 5.05 0.00 42.94 3.51
365 366 2.755650 CCGGATTCTTAGTTCGGATGG 58.244 52.381 0.00 0.00 42.94 3.51
366 367 2.135933 CGGATTCTTAGTTCGGATGGC 58.864 52.381 0.00 0.00 0.00 4.40
367 368 2.135933 GGATTCTTAGTTCGGATGGCG 58.864 52.381 0.00 0.00 0.00 5.69
368 369 2.483188 GGATTCTTAGTTCGGATGGCGT 60.483 50.000 0.00 0.00 0.00 5.68
369 370 3.243636 GGATTCTTAGTTCGGATGGCGTA 60.244 47.826 0.00 0.00 0.00 4.42
370 371 3.431922 TTCTTAGTTCGGATGGCGTAG 57.568 47.619 0.00 0.00 0.00 3.51
371 372 2.646930 TCTTAGTTCGGATGGCGTAGA 58.353 47.619 0.00 0.00 0.00 2.59
372 373 2.617308 TCTTAGTTCGGATGGCGTAGAG 59.383 50.000 0.00 0.00 0.00 2.43
373 374 1.315690 TAGTTCGGATGGCGTAGAGG 58.684 55.000 0.00 0.00 0.00 3.69
374 375 0.683504 AGTTCGGATGGCGTAGAGGT 60.684 55.000 0.00 0.00 0.00 3.85
375 376 0.527817 GTTCGGATGGCGTAGAGGTG 60.528 60.000 0.00 0.00 0.00 4.00
376 377 1.672854 TTCGGATGGCGTAGAGGTGG 61.673 60.000 0.00 0.00 0.00 4.61
377 378 2.109181 GGATGGCGTAGAGGTGGC 59.891 66.667 0.00 0.00 0.00 5.01
378 379 2.731571 GGATGGCGTAGAGGTGGCA 61.732 63.158 0.00 0.00 45.22 4.92
379 380 1.227380 GATGGCGTAGAGGTGGCAG 60.227 63.158 0.00 0.00 44.30 4.85
380 381 1.961180 GATGGCGTAGAGGTGGCAGT 61.961 60.000 0.00 0.00 44.30 4.40
381 382 2.125512 GGCGTAGAGGTGGCAGTG 60.126 66.667 0.00 0.00 0.00 3.66
382 383 2.125512 GCGTAGAGGTGGCAGTGG 60.126 66.667 0.00 0.00 0.00 4.00
383 384 2.125512 CGTAGAGGTGGCAGTGGC 60.126 66.667 10.30 10.30 40.13 5.01
384 385 2.125512 GTAGAGGTGGCAGTGGCG 60.126 66.667 12.58 0.00 42.47 5.69
385 386 3.390521 TAGAGGTGGCAGTGGCGG 61.391 66.667 12.58 0.00 42.47 6.13
387 388 4.643387 GAGGTGGCAGTGGCGGTT 62.643 66.667 12.58 0.00 42.47 4.44
388 389 4.643387 AGGTGGCAGTGGCGGTTC 62.643 66.667 12.58 2.63 42.47 3.62
394 395 3.345808 CAGTGGCGGTTCGTGGTG 61.346 66.667 0.00 0.00 0.00 4.17
395 396 4.619227 AGTGGCGGTTCGTGGTGG 62.619 66.667 0.00 0.00 0.00 4.61
414 415 3.213264 CCATGGTGGCTTGATGGC 58.787 61.111 2.57 0.00 42.18 4.40
415 416 1.380785 CCATGGTGGCTTGATGGCT 60.381 57.895 2.57 0.00 42.34 4.75
416 417 1.389609 CCATGGTGGCTTGATGGCTC 61.390 60.000 2.57 0.00 42.34 4.70
417 418 1.452651 ATGGTGGCTTGATGGCTCG 60.453 57.895 0.00 0.00 42.34 5.03
418 419 1.913951 ATGGTGGCTTGATGGCTCGA 61.914 55.000 0.00 0.00 42.34 4.04
419 420 1.153086 GGTGGCTTGATGGCTCGAT 60.153 57.895 0.00 0.00 42.34 3.59
420 421 0.749454 GGTGGCTTGATGGCTCGATT 60.749 55.000 0.00 0.00 42.34 3.34
421 422 1.098050 GTGGCTTGATGGCTCGATTT 58.902 50.000 0.00 0.00 42.34 2.17
422 423 1.097232 TGGCTTGATGGCTCGATTTG 58.903 50.000 0.00 0.00 42.34 2.32
423 424 0.383231 GGCTTGATGGCTCGATTTGG 59.617 55.000 0.00 0.00 38.32 3.28
424 425 1.098050 GCTTGATGGCTCGATTTGGT 58.902 50.000 0.00 0.00 0.00 3.67
425 426 1.202222 GCTTGATGGCTCGATTTGGTG 60.202 52.381 0.00 0.00 0.00 4.17
426 427 0.810648 TTGATGGCTCGATTTGGTGC 59.189 50.000 0.00 0.00 0.00 5.01
427 428 0.035152 TGATGGCTCGATTTGGTGCT 60.035 50.000 0.00 0.00 0.00 4.40
428 429 0.379669 GATGGCTCGATTTGGTGCTG 59.620 55.000 0.00 0.00 0.00 4.41
429 430 0.035152 ATGGCTCGATTTGGTGCTGA 60.035 50.000 0.00 0.00 0.00 4.26
430 431 0.035152 TGGCTCGATTTGGTGCTGAT 60.035 50.000 0.00 0.00 0.00 2.90
431 432 1.098050 GGCTCGATTTGGTGCTGATT 58.902 50.000 0.00 0.00 0.00 2.57
432 433 1.474077 GGCTCGATTTGGTGCTGATTT 59.526 47.619 0.00 0.00 0.00 2.17
433 434 2.523015 GCTCGATTTGGTGCTGATTTG 58.477 47.619 0.00 0.00 0.00 2.32
434 435 2.095059 GCTCGATTTGGTGCTGATTTGT 60.095 45.455 0.00 0.00 0.00 2.83
435 436 3.495193 CTCGATTTGGTGCTGATTTGTG 58.505 45.455 0.00 0.00 0.00 3.33
436 437 2.884012 TCGATTTGGTGCTGATTTGTGT 59.116 40.909 0.00 0.00 0.00 3.72
437 438 2.981805 CGATTTGGTGCTGATTTGTGTG 59.018 45.455 0.00 0.00 0.00 3.82
438 439 2.222007 TTTGGTGCTGATTTGTGTGC 57.778 45.000 0.00 0.00 0.00 4.57
439 440 1.401761 TTGGTGCTGATTTGTGTGCT 58.598 45.000 0.00 0.00 0.00 4.40
440 441 0.953727 TGGTGCTGATTTGTGTGCTC 59.046 50.000 0.00 0.00 0.00 4.26
441 442 0.242017 GGTGCTGATTTGTGTGCTCC 59.758 55.000 0.00 0.00 33.07 4.70
442 443 1.242076 GTGCTGATTTGTGTGCTCCT 58.758 50.000 0.00 0.00 0.00 3.69
443 444 1.610522 GTGCTGATTTGTGTGCTCCTT 59.389 47.619 0.00 0.00 0.00 3.36
444 445 1.881973 TGCTGATTTGTGTGCTCCTTC 59.118 47.619 0.00 0.00 0.00 3.46
445 446 1.135859 GCTGATTTGTGTGCTCCTTCG 60.136 52.381 0.00 0.00 0.00 3.79
446 447 2.146342 CTGATTTGTGTGCTCCTTCGT 58.854 47.619 0.00 0.00 0.00 3.85
447 448 2.143122 TGATTTGTGTGCTCCTTCGTC 58.857 47.619 0.00 0.00 0.00 4.20
448 449 2.224281 TGATTTGTGTGCTCCTTCGTCT 60.224 45.455 0.00 0.00 0.00 4.18
449 450 2.325583 TTTGTGTGCTCCTTCGTCTT 57.674 45.000 0.00 0.00 0.00 3.01
450 451 1.865865 TTGTGTGCTCCTTCGTCTTC 58.134 50.000 0.00 0.00 0.00 2.87
451 452 0.750249 TGTGTGCTCCTTCGTCTTCA 59.250 50.000 0.00 0.00 0.00 3.02
452 453 1.344438 TGTGTGCTCCTTCGTCTTCAT 59.656 47.619 0.00 0.00 0.00 2.57
453 454 1.996191 GTGTGCTCCTTCGTCTTCATC 59.004 52.381 0.00 0.00 0.00 2.92
454 455 1.272781 GTGCTCCTTCGTCTTCATCG 58.727 55.000 0.00 0.00 0.00 3.84
455 456 0.888619 TGCTCCTTCGTCTTCATCGT 59.111 50.000 0.00 0.00 0.00 3.73
456 457 1.135373 TGCTCCTTCGTCTTCATCGTC 60.135 52.381 0.00 0.00 0.00 4.20
457 458 1.816370 CTCCTTCGTCTTCATCGTCG 58.184 55.000 0.00 0.00 0.00 5.12
458 459 1.130749 CTCCTTCGTCTTCATCGTCGT 59.869 52.381 0.00 0.00 0.00 4.34
459 460 1.129998 TCCTTCGTCTTCATCGTCGTC 59.870 52.381 0.00 0.00 0.00 4.20
460 461 1.536149 CTTCGTCTTCATCGTCGTCC 58.464 55.000 0.00 0.00 0.00 4.79
461 462 0.876399 TTCGTCTTCATCGTCGTCCA 59.124 50.000 0.00 0.00 0.00 4.02
462 463 1.092348 TCGTCTTCATCGTCGTCCAT 58.908 50.000 0.00 0.00 0.00 3.41
463 464 1.191944 CGTCTTCATCGTCGTCCATG 58.808 55.000 0.00 0.00 0.00 3.66
464 465 1.560923 GTCTTCATCGTCGTCCATGG 58.439 55.000 4.97 4.97 0.00 3.66
465 466 0.179111 TCTTCATCGTCGTCCATGGC 60.179 55.000 6.96 0.96 0.00 4.40
466 467 0.179100 CTTCATCGTCGTCCATGGCT 60.179 55.000 6.96 0.00 0.00 4.75
467 468 0.460109 TTCATCGTCGTCCATGGCTG 60.460 55.000 6.96 1.19 0.00 4.85
468 469 1.141665 CATCGTCGTCCATGGCTGA 59.858 57.895 6.96 4.03 0.00 4.26
469 470 0.873312 CATCGTCGTCCATGGCTGAG 60.873 60.000 6.96 0.00 0.00 3.35
470 471 2.021068 ATCGTCGTCCATGGCTGAGG 62.021 60.000 6.96 12.58 0.00 3.86
471 472 2.187946 GTCGTCCATGGCTGAGGG 59.812 66.667 6.96 0.00 0.00 4.30
472 473 2.284625 TCGTCCATGGCTGAGGGT 60.285 61.111 6.96 0.00 0.00 4.34
473 474 1.001120 TCGTCCATGGCTGAGGGTA 59.999 57.895 6.96 0.00 0.00 3.69
474 475 0.616395 TCGTCCATGGCTGAGGGTAA 60.616 55.000 6.96 0.00 0.00 2.85
475 476 0.469917 CGTCCATGGCTGAGGGTAAT 59.530 55.000 6.96 0.00 0.00 1.89
476 477 1.811558 CGTCCATGGCTGAGGGTAATG 60.812 57.143 6.96 0.00 0.00 1.90
477 478 0.846015 TCCATGGCTGAGGGTAATGG 59.154 55.000 6.96 0.00 39.35 3.16
478 479 0.846015 CCATGGCTGAGGGTAATGGA 59.154 55.000 0.00 0.00 40.23 3.41
479 480 1.426598 CCATGGCTGAGGGTAATGGAT 59.573 52.381 0.00 0.00 40.23 3.41
480 481 2.644299 CCATGGCTGAGGGTAATGGATA 59.356 50.000 0.00 0.00 40.23 2.59
481 482 3.267812 CCATGGCTGAGGGTAATGGATAT 59.732 47.826 0.00 0.00 40.23 1.63
482 483 4.267536 CATGGCTGAGGGTAATGGATATG 58.732 47.826 0.00 0.00 0.00 1.78
483 484 2.644299 TGGCTGAGGGTAATGGATATGG 59.356 50.000 0.00 0.00 0.00 2.74
484 485 2.644798 GGCTGAGGGTAATGGATATGGT 59.355 50.000 0.00 0.00 0.00 3.55
485 486 3.560025 GGCTGAGGGTAATGGATATGGTG 60.560 52.174 0.00 0.00 0.00 4.17
486 487 3.679389 CTGAGGGTAATGGATATGGTGC 58.321 50.000 0.00 0.00 0.00 5.01
487 488 2.375174 TGAGGGTAATGGATATGGTGCC 59.625 50.000 0.00 0.00 0.00 5.01
488 489 2.644798 GAGGGTAATGGATATGGTGCCT 59.355 50.000 0.00 0.00 0.00 4.75
489 490 2.376518 AGGGTAATGGATATGGTGCCTG 59.623 50.000 0.00 0.00 0.00 4.85
490 491 2.162681 GGTAATGGATATGGTGCCTGC 58.837 52.381 0.00 0.00 0.00 4.85
491 492 2.488891 GGTAATGGATATGGTGCCTGCA 60.489 50.000 0.00 0.00 0.00 4.41
492 493 2.688902 AATGGATATGGTGCCTGCAT 57.311 45.000 0.00 0.00 0.00 3.96
493 494 2.688902 ATGGATATGGTGCCTGCATT 57.311 45.000 0.00 0.00 0.00 3.56
494 495 2.457813 TGGATATGGTGCCTGCATTT 57.542 45.000 0.00 0.00 0.00 2.32
495 496 3.591695 TGGATATGGTGCCTGCATTTA 57.408 42.857 0.00 0.00 0.00 1.40
496 497 3.221771 TGGATATGGTGCCTGCATTTAC 58.778 45.455 0.00 0.00 0.00 2.01
497 498 3.117550 TGGATATGGTGCCTGCATTTACT 60.118 43.478 0.00 0.00 0.00 2.24
498 499 3.503748 GGATATGGTGCCTGCATTTACTC 59.496 47.826 0.00 0.00 0.00 2.59
499 500 2.814805 ATGGTGCCTGCATTTACTCT 57.185 45.000 0.00 0.00 0.00 3.24
500 501 2.113860 TGGTGCCTGCATTTACTCTC 57.886 50.000 0.00 0.00 0.00 3.20
501 502 1.630369 TGGTGCCTGCATTTACTCTCT 59.370 47.619 0.00 0.00 0.00 3.10
502 503 2.284190 GGTGCCTGCATTTACTCTCTC 58.716 52.381 0.00 0.00 0.00 3.20
503 504 2.093235 GGTGCCTGCATTTACTCTCTCT 60.093 50.000 0.00 0.00 0.00 3.10
504 505 3.133003 GGTGCCTGCATTTACTCTCTCTA 59.867 47.826 0.00 0.00 0.00 2.43
505 506 4.383118 GGTGCCTGCATTTACTCTCTCTAA 60.383 45.833 0.00 0.00 0.00 2.10
506 507 4.808364 GTGCCTGCATTTACTCTCTCTAAG 59.192 45.833 0.00 0.00 0.00 2.18
507 508 3.807071 GCCTGCATTTACTCTCTCTAAGC 59.193 47.826 0.00 0.00 0.00 3.09
508 509 4.442753 GCCTGCATTTACTCTCTCTAAGCT 60.443 45.833 0.00 0.00 0.00 3.74
509 510 5.288804 CCTGCATTTACTCTCTCTAAGCTC 58.711 45.833 0.00 0.00 0.00 4.09
510 511 5.068987 CCTGCATTTACTCTCTCTAAGCTCT 59.931 44.000 0.00 0.00 0.00 4.09
511 512 6.142818 TGCATTTACTCTCTCTAAGCTCTC 57.857 41.667 0.00 0.00 0.00 3.20
512 513 5.890985 TGCATTTACTCTCTCTAAGCTCTCT 59.109 40.000 0.00 0.00 0.00 3.10
513 514 6.183360 TGCATTTACTCTCTCTAAGCTCTCTG 60.183 42.308 0.00 0.00 0.00 3.35
514 515 6.735694 GCATTTACTCTCTCTAAGCTCTCTGG 60.736 46.154 0.00 0.00 0.00 3.86
515 516 3.297134 ACTCTCTCTAAGCTCTCTGGG 57.703 52.381 0.00 0.00 0.00 4.45
516 517 1.956477 CTCTCTCTAAGCTCTCTGGGC 59.044 57.143 0.00 0.00 0.00 5.36
517 518 0.667993 CTCTCTAAGCTCTCTGGGCG 59.332 60.000 0.00 0.00 34.52 6.13
518 519 0.256177 TCTCTAAGCTCTCTGGGCGA 59.744 55.000 0.00 0.00 34.52 5.54
519 520 1.133637 TCTCTAAGCTCTCTGGGCGAT 60.134 52.381 0.00 0.00 34.52 4.58
520 521 1.686052 CTCTAAGCTCTCTGGGCGATT 59.314 52.381 0.00 0.00 34.52 3.34
521 522 1.683917 TCTAAGCTCTCTGGGCGATTC 59.316 52.381 0.00 0.00 34.52 2.52
522 523 1.686052 CTAAGCTCTCTGGGCGATTCT 59.314 52.381 0.00 0.00 34.52 2.40
523 524 0.463620 AAGCTCTCTGGGCGATTCTC 59.536 55.000 0.00 0.00 34.52 2.87
524 525 1.068921 GCTCTCTGGGCGATTCTCC 59.931 63.158 0.00 0.00 0.00 3.71
525 526 1.680522 GCTCTCTGGGCGATTCTCCA 61.681 60.000 0.00 0.00 0.00 3.86
526 527 1.047002 CTCTCTGGGCGATTCTCCAT 58.953 55.000 0.00 0.00 31.95 3.41
527 528 1.415659 CTCTCTGGGCGATTCTCCATT 59.584 52.381 0.00 0.00 31.95 3.16
528 529 1.139654 TCTCTGGGCGATTCTCCATTG 59.860 52.381 0.00 0.00 31.95 2.82
529 530 0.464373 TCTGGGCGATTCTCCATTGC 60.464 55.000 0.00 0.00 41.27 3.56
530 531 1.779025 CTGGGCGATTCTCCATTGCG 61.779 60.000 0.00 0.00 42.81 4.85
531 532 1.523711 GGGCGATTCTCCATTGCGA 60.524 57.895 0.00 0.00 42.81 5.10
532 533 0.886490 GGGCGATTCTCCATTGCGAT 60.886 55.000 0.00 0.00 42.81 4.58
533 534 0.947244 GGCGATTCTCCATTGCGATT 59.053 50.000 0.00 0.00 42.81 3.34
534 535 1.069636 GGCGATTCTCCATTGCGATTC 60.070 52.381 0.00 0.00 42.81 2.52
535 536 1.069636 GCGATTCTCCATTGCGATTCC 60.070 52.381 0.00 0.00 32.26 3.01
536 537 2.212652 CGATTCTCCATTGCGATTCCA 58.787 47.619 0.00 0.00 0.00 3.53
537 538 2.222678 CGATTCTCCATTGCGATTCCAG 59.777 50.000 0.00 0.00 0.00 3.86
538 539 1.382522 TTCTCCATTGCGATTCCAGC 58.617 50.000 0.00 0.00 0.00 4.85
539 540 0.811219 TCTCCATTGCGATTCCAGCG 60.811 55.000 0.00 0.00 37.44 5.18
540 541 0.811219 CTCCATTGCGATTCCAGCGA 60.811 55.000 0.00 0.00 37.44 4.93
541 542 1.089481 TCCATTGCGATTCCAGCGAC 61.089 55.000 0.00 0.00 37.44 5.19
542 543 1.091771 CCATTGCGATTCCAGCGACT 61.092 55.000 0.00 0.00 37.44 4.18
543 544 0.729116 CATTGCGATTCCAGCGACTT 59.271 50.000 0.00 0.00 37.44 3.01
544 545 1.009829 ATTGCGATTCCAGCGACTTC 58.990 50.000 0.00 0.00 37.44 3.01
545 546 0.037326 TTGCGATTCCAGCGACTTCT 60.037 50.000 0.00 0.00 37.44 2.85
546 547 0.037326 TGCGATTCCAGCGACTTCTT 60.037 50.000 0.00 0.00 37.44 2.52
547 548 0.647925 GCGATTCCAGCGACTTCTTC 59.352 55.000 0.00 0.00 0.00 2.87
560 561 2.416893 GACTTCTTCGACTTTGGGATGC 59.583 50.000 0.00 0.00 0.00 3.91
561 562 2.039084 ACTTCTTCGACTTTGGGATGCT 59.961 45.455 0.00 0.00 0.00 3.79
562 563 2.099141 TCTTCGACTTTGGGATGCTG 57.901 50.000 0.00 0.00 0.00 4.41
563 564 1.089920 CTTCGACTTTGGGATGCTGG 58.910 55.000 0.00 0.00 0.00 4.85
564 565 0.690192 TTCGACTTTGGGATGCTGGA 59.310 50.000 0.00 0.00 0.00 3.86
565 566 0.036388 TCGACTTTGGGATGCTGGAC 60.036 55.000 0.00 0.00 0.00 4.02
566 567 1.026718 CGACTTTGGGATGCTGGACC 61.027 60.000 0.00 0.00 0.00 4.46
567 568 0.329596 GACTTTGGGATGCTGGACCT 59.670 55.000 0.00 0.00 0.00 3.85
568 569 0.779997 ACTTTGGGATGCTGGACCTT 59.220 50.000 0.00 0.00 0.00 3.50
569 570 1.180029 CTTTGGGATGCTGGACCTTG 58.820 55.000 0.00 0.00 0.00 3.61
570 571 0.482446 TTTGGGATGCTGGACCTTGT 59.518 50.000 0.00 0.00 0.00 3.16
571 572 0.251297 TTGGGATGCTGGACCTTGTG 60.251 55.000 0.00 0.00 0.00 3.33
572 573 1.379044 GGGATGCTGGACCTTGTGG 60.379 63.158 0.00 0.00 39.83 4.17
573 574 1.379044 GGATGCTGGACCTTGTGGG 60.379 63.158 0.00 0.00 41.89 4.61
574 575 2.036256 ATGCTGGACCTTGTGGGC 59.964 61.111 0.00 0.00 41.93 5.36
575 576 2.490270 GATGCTGGACCTTGTGGGCT 62.490 60.000 0.00 0.00 42.43 5.19
576 577 2.674380 GCTGGACCTTGTGGGCTG 60.674 66.667 0.00 0.00 42.43 4.85
577 578 3.160585 CTGGACCTTGTGGGCTGA 58.839 61.111 0.00 0.00 42.43 4.26
578 579 1.002868 CTGGACCTTGTGGGCTGAG 60.003 63.158 0.00 0.00 42.43 3.35
579 580 2.352805 GGACCTTGTGGGCTGAGG 59.647 66.667 0.00 0.00 42.43 3.86
580 581 2.529744 GGACCTTGTGGGCTGAGGT 61.530 63.158 0.00 0.00 46.11 3.85
581 582 1.198759 GGACCTTGTGGGCTGAGGTA 61.199 60.000 0.00 0.00 43.59 3.08
582 583 0.250513 GACCTTGTGGGCTGAGGTAG 59.749 60.000 0.00 0.00 43.59 3.18
583 584 1.201429 ACCTTGTGGGCTGAGGTAGG 61.201 60.000 0.00 0.00 41.83 3.18
584 585 1.201429 CCTTGTGGGCTGAGGTAGGT 61.201 60.000 0.00 0.00 0.00 3.08
585 586 0.036010 CTTGTGGGCTGAGGTAGGTG 60.036 60.000 0.00 0.00 0.00 4.00
586 587 0.472925 TTGTGGGCTGAGGTAGGTGA 60.473 55.000 0.00 0.00 0.00 4.02
587 588 1.192146 TGTGGGCTGAGGTAGGTGAC 61.192 60.000 0.00 0.00 0.00 3.67
589 590 0.178903 TGGGCTGAGGTAGGTGACTT 60.179 55.000 0.00 0.00 43.67 3.01
590 591 1.078159 TGGGCTGAGGTAGGTGACTTA 59.922 52.381 0.00 0.00 43.67 2.24
591 592 2.292918 TGGGCTGAGGTAGGTGACTTAT 60.293 50.000 0.00 0.00 43.67 1.73
592 593 2.365941 GGGCTGAGGTAGGTGACTTATC 59.634 54.545 0.00 0.00 43.67 1.75
593 594 2.034812 GGCTGAGGTAGGTGACTTATCG 59.965 54.545 0.00 0.00 43.67 2.92
594 595 2.688958 GCTGAGGTAGGTGACTTATCGT 59.311 50.000 0.00 0.00 43.67 3.73
595 596 3.243134 GCTGAGGTAGGTGACTTATCGTC 60.243 52.174 0.00 0.00 43.67 4.20
596 597 4.200874 CTGAGGTAGGTGACTTATCGTCT 58.799 47.826 0.00 0.00 43.25 4.18
597 598 3.945921 TGAGGTAGGTGACTTATCGTCTG 59.054 47.826 0.00 0.00 43.25 3.51
598 599 3.946558 GAGGTAGGTGACTTATCGTCTGT 59.053 47.826 0.00 0.00 43.25 3.41
599 600 3.946558 AGGTAGGTGACTTATCGTCTGTC 59.053 47.826 0.00 0.00 43.25 3.51
600 601 3.693085 GGTAGGTGACTTATCGTCTGTCA 59.307 47.826 0.00 0.00 43.25 3.58
601 602 4.157289 GGTAGGTGACTTATCGTCTGTCAA 59.843 45.833 0.00 0.00 43.25 3.18
602 603 4.442375 AGGTGACTTATCGTCTGTCAAG 57.558 45.455 0.00 0.00 43.25 3.02
603 604 4.079970 AGGTGACTTATCGTCTGTCAAGA 58.920 43.478 0.00 0.00 43.25 3.02
604 605 4.156922 AGGTGACTTATCGTCTGTCAAGAG 59.843 45.833 0.00 0.00 43.25 2.85
605 606 4.156190 GGTGACTTATCGTCTGTCAAGAGA 59.844 45.833 0.00 0.00 43.25 3.10
606 607 5.163602 GGTGACTTATCGTCTGTCAAGAGAT 60.164 44.000 0.00 0.00 43.25 2.75
607 608 5.968848 GTGACTTATCGTCTGTCAAGAGATC 59.031 44.000 0.00 0.00 43.25 2.75
608 609 5.066634 TGACTTATCGTCTGTCAAGAGATCC 59.933 44.000 0.00 0.00 43.25 3.36
609 610 4.950475 ACTTATCGTCTGTCAAGAGATCCA 59.050 41.667 0.00 0.00 31.37 3.41
610 611 5.596361 ACTTATCGTCTGTCAAGAGATCCAT 59.404 40.000 0.00 0.00 31.37 3.41
611 612 4.582701 ATCGTCTGTCAAGAGATCCATC 57.417 45.455 0.00 0.00 31.37 3.51
612 613 3.625853 TCGTCTGTCAAGAGATCCATCT 58.374 45.455 0.00 0.00 40.50 2.90
613 614 4.019858 TCGTCTGTCAAGAGATCCATCTT 58.980 43.478 0.00 0.00 40.17 2.40
614 615 4.097135 TCGTCTGTCAAGAGATCCATCTTC 59.903 45.833 0.00 0.00 37.43 2.87
615 616 4.142293 CGTCTGTCAAGAGATCCATCTTCA 60.142 45.833 0.00 0.00 37.43 3.02
616 617 5.623141 CGTCTGTCAAGAGATCCATCTTCAA 60.623 44.000 0.00 0.00 37.43 2.69
617 618 5.580297 GTCTGTCAAGAGATCCATCTTCAAC 59.420 44.000 0.00 0.00 37.43 3.18
618 619 5.246883 TCTGTCAAGAGATCCATCTTCAACA 59.753 40.000 8.20 8.20 37.43 3.33
619 620 5.868454 TGTCAAGAGATCCATCTTCAACAA 58.132 37.500 6.85 0.00 37.43 2.83
620 621 6.479006 TGTCAAGAGATCCATCTTCAACAAT 58.521 36.000 6.85 0.00 37.43 2.71
621 622 7.623630 TGTCAAGAGATCCATCTTCAACAATA 58.376 34.615 6.85 0.00 37.43 1.90
795 797 1.607178 CTGGGCCCATTTGTCAGCA 60.607 57.895 28.82 0.00 0.00 4.41
1203 1265 2.265367 TCTTGATTAGTGGAGGGTGCA 58.735 47.619 0.00 0.00 0.00 4.57
1255 1317 5.185249 GGGTTCATCTCTGTACAGTGTTAGA 59.815 44.000 21.99 16.98 0.00 2.10
1445 1544 2.576191 ACCAACTGAGGCCTATTAAGCA 59.424 45.455 4.42 0.00 0.00 3.91
1847 1960 0.324943 GTTGGCCAAGCTGAGGACTA 59.675 55.000 21.21 2.28 34.31 2.59
2058 2187 1.000506 CATTTTGCAGAGCCAAGCTGT 59.999 47.619 0.00 0.00 39.88 4.40
2582 2802 1.405821 CTTAGTGGCCCACTACTCTCG 59.594 57.143 23.13 6.10 45.13 4.04
2765 2986 1.669440 GCTGTGGAGGTACGGACAA 59.331 57.895 0.00 0.00 0.00 3.18
2820 3050 0.324738 CAGAGGGCACTAGAGGTGGA 60.325 60.000 0.00 0.00 45.44 4.02
3132 6771 5.157940 TCTGCTGCTTCTTCTACATCTTT 57.842 39.130 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.124921 GATCACGGCGGTGGTTGG 61.125 66.667 22.51 0.00 44.50 3.77
32 33 3.124921 GGATCACGGCGGTGGTTG 61.125 66.667 22.51 0.00 44.50 3.77
33 34 3.632080 TGGATCACGGCGGTGGTT 61.632 61.111 22.51 11.71 44.50 3.67
34 35 4.388499 GTGGATCACGGCGGTGGT 62.388 66.667 22.51 17.15 44.50 4.16
43 44 2.257409 ATCTGGCACGGGTGGATCAC 62.257 60.000 0.43 0.00 33.92 3.06
44 45 1.971505 GATCTGGCACGGGTGGATCA 61.972 60.000 7.14 0.00 34.64 2.92
45 46 1.227674 GATCTGGCACGGGTGGATC 60.228 63.158 0.43 1.56 33.92 3.36
46 47 2.746375 GGATCTGGCACGGGTGGAT 61.746 63.158 0.43 0.00 33.92 3.41
47 48 3.399181 GGATCTGGCACGGGTGGA 61.399 66.667 0.43 0.00 33.92 4.02
48 49 3.687321 CTGGATCTGGCACGGGTGG 62.687 68.421 0.43 0.00 33.92 4.61
49 50 2.124983 CTGGATCTGGCACGGGTG 60.125 66.667 0.00 0.00 33.92 4.61
50 51 4.101448 GCTGGATCTGGCACGGGT 62.101 66.667 0.00 0.00 33.92 5.28
51 52 3.626996 TTGCTGGATCTGGCACGGG 62.627 63.158 11.45 0.00 38.23 5.28
52 53 2.046023 TTGCTGGATCTGGCACGG 60.046 61.111 11.45 0.00 38.23 4.94
53 54 2.758089 GCTTGCTGGATCTGGCACG 61.758 63.158 11.45 11.03 38.23 5.34
54 55 2.413142 GGCTTGCTGGATCTGGCAC 61.413 63.158 11.45 3.58 38.23 5.01
55 56 2.044650 GGCTTGCTGGATCTGGCA 60.045 61.111 8.59 8.59 36.62 4.92
56 57 3.207669 CGGCTTGCTGGATCTGGC 61.208 66.667 0.00 0.00 0.00 4.85
57 58 2.110967 CACGGCTTGCTGGATCTGG 61.111 63.158 6.39 0.00 0.00 3.86
58 59 2.110967 CCACGGCTTGCTGGATCTG 61.111 63.158 6.39 0.00 0.00 2.90
59 60 2.270205 CCACGGCTTGCTGGATCT 59.730 61.111 6.39 0.00 0.00 2.75
60 61 2.825836 CCCACGGCTTGCTGGATC 60.826 66.667 6.39 0.00 0.00 3.36
61 62 3.329889 TCCCACGGCTTGCTGGAT 61.330 61.111 6.39 0.00 0.00 3.41
62 63 4.020617 CTCCCACGGCTTGCTGGA 62.021 66.667 6.39 1.00 0.00 3.86
63 64 3.551496 TTCTCCCACGGCTTGCTGG 62.551 63.158 6.39 0.42 0.00 4.85
64 65 2.032528 TTCTCCCACGGCTTGCTG 59.967 61.111 0.00 0.00 0.00 4.41
65 66 2.177594 CTCTTCTCCCACGGCTTGCT 62.178 60.000 0.00 0.00 0.00 3.91
66 67 1.743252 CTCTTCTCCCACGGCTTGC 60.743 63.158 0.00 0.00 0.00 4.01
67 68 0.539051 ATCTCTTCTCCCACGGCTTG 59.461 55.000 0.00 0.00 0.00 4.01
68 69 0.827368 GATCTCTTCTCCCACGGCTT 59.173 55.000 0.00 0.00 0.00 4.35
69 70 1.045911 GGATCTCTTCTCCCACGGCT 61.046 60.000 0.00 0.00 0.00 5.52
70 71 1.443828 GGATCTCTTCTCCCACGGC 59.556 63.158 0.00 0.00 0.00 5.68
76 77 1.443828 GCGGTGGGATCTCTTCTCC 59.556 63.158 0.00 0.00 0.00 3.71
77 78 1.443828 GGCGGTGGGATCTCTTCTC 59.556 63.158 0.00 0.00 0.00 2.87
78 79 2.066999 GGGCGGTGGGATCTCTTCT 61.067 63.158 0.00 0.00 0.00 2.85
79 80 2.506472 GGGCGGTGGGATCTCTTC 59.494 66.667 0.00 0.00 0.00 2.87
80 81 3.090532 GGGGCGGTGGGATCTCTT 61.091 66.667 0.00 0.00 0.00 2.85
102 103 4.717313 AGGAAAAGCCCGGCCGAC 62.717 66.667 30.73 19.05 37.37 4.79
103 104 4.715523 CAGGAAAAGCCCGGCCGA 62.716 66.667 30.73 0.00 37.37 5.54
105 106 4.678743 ACCAGGAAAAGCCCGGCC 62.679 66.667 5.55 0.00 37.37 6.13
106 107 3.373565 CACCAGGAAAAGCCCGGC 61.374 66.667 0.00 0.00 37.37 6.13
107 108 2.676471 CCACCAGGAAAAGCCCGG 60.676 66.667 0.00 0.00 37.37 5.73
108 109 3.373565 GCCACCAGGAAAAGCCCG 61.374 66.667 0.00 0.00 37.37 6.13
109 110 2.203625 TGCCACCAGGAAAAGCCC 60.204 61.111 0.00 0.00 37.37 5.19
110 111 1.832167 TGTGCCACCAGGAAAAGCC 60.832 57.895 0.00 0.00 36.89 4.35
111 112 1.363807 GTGTGCCACCAGGAAAAGC 59.636 57.895 0.00 0.00 36.89 3.51
135 136 3.898509 CTCTCCTCCTCGCTGCCG 61.899 72.222 0.00 0.00 0.00 5.69
136 137 3.535962 CCTCTCCTCCTCGCTGCC 61.536 72.222 0.00 0.00 0.00 4.85
137 138 2.757917 ACCTCTCCTCCTCGCTGC 60.758 66.667 0.00 0.00 0.00 5.25
138 139 2.477176 CGACCTCTCCTCCTCGCTG 61.477 68.421 0.00 0.00 0.00 5.18
139 140 2.124487 CGACCTCTCCTCCTCGCT 60.124 66.667 0.00 0.00 0.00 4.93
140 141 3.213402 CCGACCTCTCCTCCTCGC 61.213 72.222 0.00 0.00 0.00 5.03
141 142 2.517402 CCCGACCTCTCCTCCTCG 60.517 72.222 0.00 0.00 0.00 4.63
142 143 2.123640 CCCCGACCTCTCCTCCTC 60.124 72.222 0.00 0.00 0.00 3.71
143 144 3.756783 CCCCCGACCTCTCCTCCT 61.757 72.222 0.00 0.00 0.00 3.69
144 145 3.742248 CTCCCCCGACCTCTCCTCC 62.742 73.684 0.00 0.00 0.00 4.30
145 146 2.123640 CTCCCCCGACCTCTCCTC 60.124 72.222 0.00 0.00 0.00 3.71
146 147 3.756783 CCTCCCCCGACCTCTCCT 61.757 72.222 0.00 0.00 0.00 3.69
147 148 4.862823 CCCTCCCCCGACCTCTCC 62.863 77.778 0.00 0.00 0.00 3.71
148 149 3.752167 TCCCTCCCCCGACCTCTC 61.752 72.222 0.00 0.00 0.00 3.20
149 150 4.077180 GTCCCTCCCCCGACCTCT 62.077 72.222 0.00 0.00 0.00 3.69
155 156 4.541648 ATCCTCGTCCCTCCCCCG 62.542 72.222 0.00 0.00 0.00 5.73
156 157 2.844839 CATCCTCGTCCCTCCCCC 60.845 72.222 0.00 0.00 0.00 5.40
157 158 3.551407 GCATCCTCGTCCCTCCCC 61.551 72.222 0.00 0.00 0.00 4.81
158 159 3.917760 CGCATCCTCGTCCCTCCC 61.918 72.222 0.00 0.00 0.00 4.30
159 160 3.917760 CCGCATCCTCGTCCCTCC 61.918 72.222 0.00 0.00 0.00 4.30
160 161 2.833582 TCCGCATCCTCGTCCCTC 60.834 66.667 0.00 0.00 0.00 4.30
161 162 2.835431 CTCCGCATCCTCGTCCCT 60.835 66.667 0.00 0.00 0.00 4.20
162 163 3.917760 CCTCCGCATCCTCGTCCC 61.918 72.222 0.00 0.00 0.00 4.46
163 164 4.593864 GCCTCCGCATCCTCGTCC 62.594 72.222 0.00 0.00 34.03 4.79
164 165 4.933064 CGCCTCCGCATCCTCGTC 62.933 72.222 0.00 0.00 34.03 4.20
174 175 4.222847 GGAACCCTAGCGCCTCCG 62.223 72.222 2.29 0.00 37.57 4.63
211 212 4.508128 TGAATCCTCCCGCGTCGC 62.508 66.667 7.29 7.29 0.00 5.19
212 213 2.278857 CTGAATCCTCCCGCGTCG 60.279 66.667 4.92 0.00 0.00 5.12
213 214 2.107141 CCTGAATCCTCCCGCGTC 59.893 66.667 4.92 0.00 0.00 5.19
214 215 2.363795 TCCTGAATCCTCCCGCGT 60.364 61.111 4.92 0.00 0.00 6.01
215 216 1.467678 ATCTCCTGAATCCTCCCGCG 61.468 60.000 0.00 0.00 0.00 6.46
216 217 0.761802 AATCTCCTGAATCCTCCCGC 59.238 55.000 0.00 0.00 0.00 6.13
217 218 3.580458 ACATAATCTCCTGAATCCTCCCG 59.420 47.826 0.00 0.00 0.00 5.14
218 219 5.163152 ACAACATAATCTCCTGAATCCTCCC 60.163 44.000 0.00 0.00 0.00 4.30
219 220 5.934781 ACAACATAATCTCCTGAATCCTCC 58.065 41.667 0.00 0.00 0.00 4.30
220 221 7.680588 GCAAACAACATAATCTCCTGAATCCTC 60.681 40.741 0.00 0.00 0.00 3.71
221 222 6.096001 GCAAACAACATAATCTCCTGAATCCT 59.904 38.462 0.00 0.00 0.00 3.24
222 223 6.127647 TGCAAACAACATAATCTCCTGAATCC 60.128 38.462 0.00 0.00 0.00 3.01
223 224 6.855836 TGCAAACAACATAATCTCCTGAATC 58.144 36.000 0.00 0.00 0.00 2.52
224 225 6.839124 TGCAAACAACATAATCTCCTGAAT 57.161 33.333 0.00 0.00 0.00 2.57
225 226 6.839124 ATGCAAACAACATAATCTCCTGAA 57.161 33.333 0.00 0.00 0.00 3.02
226 227 7.392953 TGTTATGCAAACAACATAATCTCCTGA 59.607 33.333 10.67 0.00 40.90 3.86
227 228 7.537715 TGTTATGCAAACAACATAATCTCCTG 58.462 34.615 10.67 0.00 40.90 3.86
228 229 7.701539 TGTTATGCAAACAACATAATCTCCT 57.298 32.000 10.67 0.00 40.90 3.69
229 230 9.669353 CTATGTTATGCAAACAACATAATCTCC 57.331 33.333 22.06 0.00 43.44 3.71
232 233 9.236691 CCACTATGTTATGCAAACAACATAATC 57.763 33.333 22.06 2.20 43.44 1.75
233 234 8.748412 ACCACTATGTTATGCAAACAACATAAT 58.252 29.630 22.06 15.24 43.44 1.28
234 235 8.026026 CACCACTATGTTATGCAAACAACATAA 58.974 33.333 22.06 12.59 43.44 1.90
235 236 7.175816 ACACCACTATGTTATGCAAACAACATA 59.824 33.333 21.20 21.20 42.17 2.29
236 237 6.015519 ACACCACTATGTTATGCAAACAACAT 60.016 34.615 21.23 21.23 45.07 2.71
237 238 5.300539 ACACCACTATGTTATGCAAACAACA 59.699 36.000 15.21 13.90 38.89 3.33
238 239 5.768317 ACACCACTATGTTATGCAAACAAC 58.232 37.500 15.21 9.51 33.42 3.32
239 240 5.767665 AGACACCACTATGTTATGCAAACAA 59.232 36.000 15.21 7.18 33.42 2.83
240 241 5.312895 AGACACCACTATGTTATGCAAACA 58.687 37.500 14.09 14.09 31.24 2.83
241 242 5.880054 AGACACCACTATGTTATGCAAAC 57.120 39.130 0.00 0.00 31.24 2.93
242 243 5.121611 CGAAGACACCACTATGTTATGCAAA 59.878 40.000 0.00 0.00 31.24 3.68
243 244 4.629634 CGAAGACACCACTATGTTATGCAA 59.370 41.667 0.00 0.00 31.24 4.08
244 245 4.180817 CGAAGACACCACTATGTTATGCA 58.819 43.478 0.00 0.00 31.24 3.96
245 246 4.181578 ACGAAGACACCACTATGTTATGC 58.818 43.478 0.00 0.00 31.24 3.14
246 247 6.147164 ACAAACGAAGACACCACTATGTTATG 59.853 38.462 0.00 0.00 31.24 1.90
247 248 6.228258 ACAAACGAAGACACCACTATGTTAT 58.772 36.000 0.00 0.00 31.24 1.89
248 249 5.603596 ACAAACGAAGACACCACTATGTTA 58.396 37.500 0.00 0.00 31.24 2.41
249 250 4.448210 ACAAACGAAGACACCACTATGTT 58.552 39.130 0.00 0.00 31.24 2.71
250 251 4.067972 ACAAACGAAGACACCACTATGT 57.932 40.909 0.00 0.00 34.78 2.29
251 252 5.007234 TGAAACAAACGAAGACACCACTATG 59.993 40.000 0.00 0.00 0.00 2.23
252 253 5.120399 TGAAACAAACGAAGACACCACTAT 58.880 37.500 0.00 0.00 0.00 2.12
253 254 4.505808 TGAAACAAACGAAGACACCACTA 58.494 39.130 0.00 0.00 0.00 2.74
254 255 3.340034 TGAAACAAACGAAGACACCACT 58.660 40.909 0.00 0.00 0.00 4.00
255 256 3.750639 TGAAACAAACGAAGACACCAC 57.249 42.857 0.00 0.00 0.00 4.16
256 257 4.974368 AATGAAACAAACGAAGACACCA 57.026 36.364 0.00 0.00 0.00 4.17
257 258 7.566868 GCAATTAATGAAACAAACGAAGACACC 60.567 37.037 0.00 0.00 0.00 4.16
258 259 7.167468 AGCAATTAATGAAACAAACGAAGACAC 59.833 33.333 0.00 0.00 0.00 3.67
259 260 7.199766 AGCAATTAATGAAACAAACGAAGACA 58.800 30.769 0.00 0.00 0.00 3.41
260 261 7.623268 AGCAATTAATGAAACAAACGAAGAC 57.377 32.000 0.00 0.00 0.00 3.01
261 262 8.779303 TCTAGCAATTAATGAAACAAACGAAGA 58.221 29.630 0.00 0.00 0.00 2.87
262 263 8.948853 TCTAGCAATTAATGAAACAAACGAAG 57.051 30.769 0.00 0.00 0.00 3.79
264 265 9.982291 GTATCTAGCAATTAATGAAACAAACGA 57.018 29.630 0.00 0.00 0.00 3.85
265 266 9.767684 TGTATCTAGCAATTAATGAAACAAACG 57.232 29.630 0.00 0.00 0.00 3.60
285 286 8.258007 CCCACAACCACGATTATATATGTATCT 58.742 37.037 0.00 0.00 0.00 1.98
286 287 7.494625 CCCCACAACCACGATTATATATGTATC 59.505 40.741 0.00 0.00 0.00 2.24
287 288 7.335627 CCCCACAACCACGATTATATATGTAT 58.664 38.462 0.00 0.00 0.00 2.29
288 289 6.703319 CCCCACAACCACGATTATATATGTA 58.297 40.000 0.00 0.00 0.00 2.29
289 290 5.556915 CCCCACAACCACGATTATATATGT 58.443 41.667 0.00 0.00 0.00 2.29
290 291 4.394920 GCCCCACAACCACGATTATATATG 59.605 45.833 0.00 0.00 0.00 1.78
291 292 4.288626 AGCCCCACAACCACGATTATATAT 59.711 41.667 0.00 0.00 0.00 0.86
292 293 3.649023 AGCCCCACAACCACGATTATATA 59.351 43.478 0.00 0.00 0.00 0.86
293 294 2.441750 AGCCCCACAACCACGATTATAT 59.558 45.455 0.00 0.00 0.00 0.86
294 295 1.841277 AGCCCCACAACCACGATTATA 59.159 47.619 0.00 0.00 0.00 0.98
295 296 0.623723 AGCCCCACAACCACGATTAT 59.376 50.000 0.00 0.00 0.00 1.28
296 297 0.402504 AAGCCCCACAACCACGATTA 59.597 50.000 0.00 0.00 0.00 1.75
297 298 0.469144 AAAGCCCCACAACCACGATT 60.469 50.000 0.00 0.00 0.00 3.34
298 299 1.152830 AAAGCCCCACAACCACGAT 59.847 52.632 0.00 0.00 0.00 3.73
299 300 1.826054 CAAAGCCCCACAACCACGA 60.826 57.895 0.00 0.00 0.00 4.35
300 301 2.727544 CAAAGCCCCACAACCACG 59.272 61.111 0.00 0.00 0.00 4.94
301 302 1.045911 TTCCAAAGCCCCACAACCAC 61.046 55.000 0.00 0.00 0.00 4.16
302 303 0.758685 CTTCCAAAGCCCCACAACCA 60.759 55.000 0.00 0.00 0.00 3.67
303 304 0.759060 ACTTCCAAAGCCCCACAACC 60.759 55.000 0.00 0.00 0.00 3.77
304 305 0.389025 CACTTCCAAAGCCCCACAAC 59.611 55.000 0.00 0.00 0.00 3.32
305 306 0.758685 CCACTTCCAAAGCCCCACAA 60.759 55.000 0.00 0.00 0.00 3.33
306 307 1.152567 CCACTTCCAAAGCCCCACA 60.153 57.895 0.00 0.00 0.00 4.17
307 308 0.759060 AACCACTTCCAAAGCCCCAC 60.759 55.000 0.00 0.00 0.00 4.61
308 309 0.031616 AAACCACTTCCAAAGCCCCA 60.032 50.000 0.00 0.00 0.00 4.96
309 310 0.392706 CAAACCACTTCCAAAGCCCC 59.607 55.000 0.00 0.00 0.00 5.80
310 311 0.249868 GCAAACCACTTCCAAAGCCC 60.250 55.000 0.00 0.00 0.00 5.19
311 312 0.463620 TGCAAACCACTTCCAAAGCC 59.536 50.000 0.00 0.00 0.00 4.35
312 313 1.538849 CCTGCAAACCACTTCCAAAGC 60.539 52.381 0.00 0.00 0.00 3.51
313 314 1.069049 CCCTGCAAACCACTTCCAAAG 59.931 52.381 0.00 0.00 0.00 2.77
314 315 1.118838 CCCTGCAAACCACTTCCAAA 58.881 50.000 0.00 0.00 0.00 3.28
315 316 0.758685 CCCCTGCAAACCACTTCCAA 60.759 55.000 0.00 0.00 0.00 3.53
316 317 1.152567 CCCCTGCAAACCACTTCCA 60.153 57.895 0.00 0.00 0.00 3.53
317 318 0.759060 AACCCCTGCAAACCACTTCC 60.759 55.000 0.00 0.00 0.00 3.46
318 319 0.673985 GAACCCCTGCAAACCACTTC 59.326 55.000 0.00 0.00 0.00 3.01
319 320 1.106944 CGAACCCCTGCAAACCACTT 61.107 55.000 0.00 0.00 0.00 3.16
320 321 1.528309 CGAACCCCTGCAAACCACT 60.528 57.895 0.00 0.00 0.00 4.00
321 322 3.039134 CGAACCCCTGCAAACCAC 58.961 61.111 0.00 0.00 0.00 4.16
322 323 2.909965 GCGAACCCCTGCAAACCA 60.910 61.111 0.00 0.00 0.00 3.67
323 324 3.680786 GGCGAACCCCTGCAAACC 61.681 66.667 0.00 0.00 0.00 3.27
324 325 4.038080 CGGCGAACCCCTGCAAAC 62.038 66.667 0.00 0.00 0.00 2.93
340 341 1.287425 GAACTAAGAATCCGGCACCG 58.713 55.000 1.02 1.02 39.44 4.94
341 342 1.287425 CGAACTAAGAATCCGGCACC 58.713 55.000 0.00 0.00 0.00 5.01
342 343 1.134907 TCCGAACTAAGAATCCGGCAC 60.135 52.381 0.00 0.00 39.96 5.01
343 344 1.187974 TCCGAACTAAGAATCCGGCA 58.812 50.000 0.00 0.00 39.96 5.69
344 345 2.135933 CATCCGAACTAAGAATCCGGC 58.864 52.381 0.00 0.00 39.96 6.13
345 346 2.755650 CCATCCGAACTAAGAATCCGG 58.244 52.381 0.00 0.00 41.36 5.14
346 347 2.135933 GCCATCCGAACTAAGAATCCG 58.864 52.381 0.00 0.00 0.00 4.18
347 348 2.135933 CGCCATCCGAACTAAGAATCC 58.864 52.381 0.00 0.00 40.02 3.01
348 349 2.822764 ACGCCATCCGAACTAAGAATC 58.177 47.619 0.00 0.00 41.02 2.52
349 350 2.981859 ACGCCATCCGAACTAAGAAT 57.018 45.000 0.00 0.00 41.02 2.40
350 351 3.018856 TCTACGCCATCCGAACTAAGAA 58.981 45.455 0.00 0.00 41.02 2.52
351 352 2.617308 CTCTACGCCATCCGAACTAAGA 59.383 50.000 0.00 0.00 41.02 2.10
352 353 2.287668 CCTCTACGCCATCCGAACTAAG 60.288 54.545 0.00 0.00 41.02 2.18
353 354 1.679680 CCTCTACGCCATCCGAACTAA 59.320 52.381 0.00 0.00 41.02 2.24
354 355 1.315690 CCTCTACGCCATCCGAACTA 58.684 55.000 0.00 0.00 41.02 2.24
355 356 0.683504 ACCTCTACGCCATCCGAACT 60.684 55.000 0.00 0.00 41.02 3.01
356 357 0.527817 CACCTCTACGCCATCCGAAC 60.528 60.000 0.00 0.00 41.02 3.95
357 358 1.672854 CCACCTCTACGCCATCCGAA 61.673 60.000 0.00 0.00 41.02 4.30
358 359 2.125326 CCACCTCTACGCCATCCGA 61.125 63.158 0.00 0.00 41.02 4.55
359 360 2.417516 CCACCTCTACGCCATCCG 59.582 66.667 0.00 0.00 44.21 4.18
360 361 2.109181 GCCACCTCTACGCCATCC 59.891 66.667 0.00 0.00 0.00 3.51
361 362 1.227380 CTGCCACCTCTACGCCATC 60.227 63.158 0.00 0.00 0.00 3.51
362 363 1.990060 ACTGCCACCTCTACGCCAT 60.990 57.895 0.00 0.00 0.00 4.40
363 364 2.603473 ACTGCCACCTCTACGCCA 60.603 61.111 0.00 0.00 0.00 5.69
364 365 2.125512 CACTGCCACCTCTACGCC 60.126 66.667 0.00 0.00 0.00 5.68
365 366 2.125512 CCACTGCCACCTCTACGC 60.126 66.667 0.00 0.00 0.00 4.42
366 367 2.125512 GCCACTGCCACCTCTACG 60.126 66.667 0.00 0.00 0.00 3.51
367 368 2.125512 CGCCACTGCCACCTCTAC 60.126 66.667 0.00 0.00 0.00 2.59
368 369 3.390521 CCGCCACTGCCACCTCTA 61.391 66.667 0.00 0.00 0.00 2.43
370 371 4.643387 AACCGCCACTGCCACCTC 62.643 66.667 0.00 0.00 0.00 3.85
371 372 4.643387 GAACCGCCACTGCCACCT 62.643 66.667 0.00 0.00 0.00 4.00
377 378 3.345808 CACCACGAACCGCCACTG 61.346 66.667 0.00 0.00 0.00 3.66
378 379 4.619227 CCACCACGAACCGCCACT 62.619 66.667 0.00 0.00 0.00 4.00
397 398 1.380785 AGCCATCAAGCCACCATGG 60.381 57.895 11.19 11.19 41.55 3.66
398 399 1.721664 CGAGCCATCAAGCCACCATG 61.722 60.000 0.00 0.00 0.00 3.66
399 400 1.452651 CGAGCCATCAAGCCACCAT 60.453 57.895 0.00 0.00 0.00 3.55
400 401 1.913951 ATCGAGCCATCAAGCCACCA 61.914 55.000 0.00 0.00 0.00 4.17
401 402 0.749454 AATCGAGCCATCAAGCCACC 60.749 55.000 0.00 0.00 0.00 4.61
402 403 1.098050 AAATCGAGCCATCAAGCCAC 58.902 50.000 0.00 0.00 0.00 5.01
403 404 1.097232 CAAATCGAGCCATCAAGCCA 58.903 50.000 0.00 0.00 0.00 4.75
404 405 0.383231 CCAAATCGAGCCATCAAGCC 59.617 55.000 0.00 0.00 0.00 4.35
405 406 1.098050 ACCAAATCGAGCCATCAAGC 58.902 50.000 0.00 0.00 0.00 4.01
406 407 1.202222 GCACCAAATCGAGCCATCAAG 60.202 52.381 0.00 0.00 0.00 3.02
407 408 0.810648 GCACCAAATCGAGCCATCAA 59.189 50.000 0.00 0.00 0.00 2.57
408 409 0.035152 AGCACCAAATCGAGCCATCA 60.035 50.000 0.00 0.00 0.00 3.07
409 410 0.379669 CAGCACCAAATCGAGCCATC 59.620 55.000 0.00 0.00 0.00 3.51
410 411 0.035152 TCAGCACCAAATCGAGCCAT 60.035 50.000 0.00 0.00 0.00 4.40
411 412 0.035152 ATCAGCACCAAATCGAGCCA 60.035 50.000 0.00 0.00 0.00 4.75
412 413 1.098050 AATCAGCACCAAATCGAGCC 58.902 50.000 0.00 0.00 0.00 4.70
413 414 2.095059 ACAAATCAGCACCAAATCGAGC 60.095 45.455 0.00 0.00 0.00 5.03
414 415 3.058016 ACACAAATCAGCACCAAATCGAG 60.058 43.478 0.00 0.00 0.00 4.04
415 416 2.884012 ACACAAATCAGCACCAAATCGA 59.116 40.909 0.00 0.00 0.00 3.59
416 417 2.981805 CACACAAATCAGCACCAAATCG 59.018 45.455 0.00 0.00 0.00 3.34
417 418 2.733026 GCACACAAATCAGCACCAAATC 59.267 45.455 0.00 0.00 0.00 2.17
418 419 2.366266 AGCACACAAATCAGCACCAAAT 59.634 40.909 0.00 0.00 0.00 2.32
419 420 1.755959 AGCACACAAATCAGCACCAAA 59.244 42.857 0.00 0.00 0.00 3.28
420 421 1.337703 GAGCACACAAATCAGCACCAA 59.662 47.619 0.00 0.00 0.00 3.67
421 422 0.953727 GAGCACACAAATCAGCACCA 59.046 50.000 0.00 0.00 0.00 4.17
422 423 0.242017 GGAGCACACAAATCAGCACC 59.758 55.000 0.00 0.00 0.00 5.01
423 424 1.242076 AGGAGCACACAAATCAGCAC 58.758 50.000 0.00 0.00 0.00 4.40
424 425 1.881973 GAAGGAGCACACAAATCAGCA 59.118 47.619 0.00 0.00 0.00 4.41
425 426 1.135859 CGAAGGAGCACACAAATCAGC 60.136 52.381 0.00 0.00 0.00 4.26
426 427 2.146342 ACGAAGGAGCACACAAATCAG 58.854 47.619 0.00 0.00 0.00 2.90
427 428 2.143122 GACGAAGGAGCACACAAATCA 58.857 47.619 0.00 0.00 0.00 2.57
428 429 2.417719 AGACGAAGGAGCACACAAATC 58.582 47.619 0.00 0.00 0.00 2.17
429 430 2.550830 AGACGAAGGAGCACACAAAT 57.449 45.000 0.00 0.00 0.00 2.32
430 431 2.210116 GAAGACGAAGGAGCACACAAA 58.790 47.619 0.00 0.00 0.00 2.83
431 432 1.138069 TGAAGACGAAGGAGCACACAA 59.862 47.619 0.00 0.00 0.00 3.33
432 433 0.750249 TGAAGACGAAGGAGCACACA 59.250 50.000 0.00 0.00 0.00 3.72
433 434 1.996191 GATGAAGACGAAGGAGCACAC 59.004 52.381 0.00 0.00 0.00 3.82
434 435 1.402852 CGATGAAGACGAAGGAGCACA 60.403 52.381 0.00 0.00 0.00 4.57
435 436 1.272781 CGATGAAGACGAAGGAGCAC 58.727 55.000 0.00 0.00 0.00 4.40
436 437 0.888619 ACGATGAAGACGAAGGAGCA 59.111 50.000 0.00 0.00 34.70 4.26
437 438 1.551145 GACGATGAAGACGAAGGAGC 58.449 55.000 0.00 0.00 34.70 4.70
438 439 1.130749 ACGACGATGAAGACGAAGGAG 59.869 52.381 0.00 0.00 33.85 3.69
439 440 1.129998 GACGACGATGAAGACGAAGGA 59.870 52.381 0.00 0.00 33.85 3.36
440 441 1.536149 GACGACGATGAAGACGAAGG 58.464 55.000 0.00 0.00 33.85 3.46
441 442 1.135774 TGGACGACGATGAAGACGAAG 60.136 52.381 0.00 0.00 33.85 3.79
442 443 0.876399 TGGACGACGATGAAGACGAA 59.124 50.000 0.00 0.00 33.85 3.85
443 444 1.092348 ATGGACGACGATGAAGACGA 58.908 50.000 0.00 0.00 33.85 4.20
444 445 1.191944 CATGGACGACGATGAAGACG 58.808 55.000 0.00 0.00 34.86 4.18
445 446 1.560923 CCATGGACGACGATGAAGAC 58.439 55.000 5.56 0.00 34.86 3.01
446 447 0.179111 GCCATGGACGACGATGAAGA 60.179 55.000 18.40 0.00 34.86 2.87
447 448 0.179100 AGCCATGGACGACGATGAAG 60.179 55.000 18.40 0.00 34.86 3.02
448 449 0.460109 CAGCCATGGACGACGATGAA 60.460 55.000 18.40 0.00 34.86 2.57
449 450 1.141665 CAGCCATGGACGACGATGA 59.858 57.895 18.40 0.00 34.86 2.92
450 451 0.873312 CTCAGCCATGGACGACGATG 60.873 60.000 18.40 3.10 33.16 3.84
451 452 1.439228 CTCAGCCATGGACGACGAT 59.561 57.895 18.40 0.00 0.00 3.73
452 453 2.710902 CCTCAGCCATGGACGACGA 61.711 63.158 18.40 2.32 0.00 4.20
453 454 2.202797 CCTCAGCCATGGACGACG 60.203 66.667 18.40 0.61 0.00 5.12
454 455 1.327690 TACCCTCAGCCATGGACGAC 61.328 60.000 18.40 0.00 0.00 4.34
455 456 0.616395 TTACCCTCAGCCATGGACGA 60.616 55.000 18.40 9.77 0.00 4.20
456 457 0.469917 ATTACCCTCAGCCATGGACG 59.530 55.000 18.40 5.03 0.00 4.79
457 458 1.477558 CCATTACCCTCAGCCATGGAC 60.478 57.143 18.40 7.03 37.20 4.02
458 459 0.846015 CCATTACCCTCAGCCATGGA 59.154 55.000 18.40 0.00 37.20 3.41
459 460 0.846015 TCCATTACCCTCAGCCATGG 59.154 55.000 7.63 7.63 36.48 3.66
460 461 2.965671 ATCCATTACCCTCAGCCATG 57.034 50.000 0.00 0.00 0.00 3.66
461 462 3.267812 CCATATCCATTACCCTCAGCCAT 59.732 47.826 0.00 0.00 0.00 4.40
462 463 2.644299 CCATATCCATTACCCTCAGCCA 59.356 50.000 0.00 0.00 0.00 4.75
463 464 2.644798 ACCATATCCATTACCCTCAGCC 59.355 50.000 0.00 0.00 0.00 4.85
464 465 3.679389 CACCATATCCATTACCCTCAGC 58.321 50.000 0.00 0.00 0.00 4.26
465 466 3.560025 GGCACCATATCCATTACCCTCAG 60.560 52.174 0.00 0.00 0.00 3.35
466 467 2.375174 GGCACCATATCCATTACCCTCA 59.625 50.000 0.00 0.00 0.00 3.86
467 468 2.644798 AGGCACCATATCCATTACCCTC 59.355 50.000 0.00 0.00 0.00 4.30
468 469 2.376518 CAGGCACCATATCCATTACCCT 59.623 50.000 0.00 0.00 0.00 4.34
469 470 2.795329 CAGGCACCATATCCATTACCC 58.205 52.381 0.00 0.00 0.00 3.69
470 471 2.162681 GCAGGCACCATATCCATTACC 58.837 52.381 0.00 0.00 0.00 2.85
471 472 2.862541 TGCAGGCACCATATCCATTAC 58.137 47.619 0.00 0.00 0.00 1.89
472 473 3.812611 ATGCAGGCACCATATCCATTA 57.187 42.857 0.00 0.00 0.00 1.90
473 474 2.688902 ATGCAGGCACCATATCCATT 57.311 45.000 0.00 0.00 0.00 3.16
474 475 2.688902 AATGCAGGCACCATATCCAT 57.311 45.000 0.00 0.00 0.00 3.41
475 476 2.457813 AAATGCAGGCACCATATCCA 57.542 45.000 0.00 0.00 0.00 3.41
476 477 3.490348 AGTAAATGCAGGCACCATATCC 58.510 45.455 0.00 0.00 0.00 2.59
477 478 4.392940 AGAGTAAATGCAGGCACCATATC 58.607 43.478 0.00 0.00 0.00 1.63
478 479 4.103785 AGAGAGTAAATGCAGGCACCATAT 59.896 41.667 0.00 0.00 0.00 1.78
479 480 3.455910 AGAGAGTAAATGCAGGCACCATA 59.544 43.478 0.00 0.00 0.00 2.74
480 481 2.240667 AGAGAGTAAATGCAGGCACCAT 59.759 45.455 0.00 0.00 0.00 3.55
481 482 1.630369 AGAGAGTAAATGCAGGCACCA 59.370 47.619 0.00 0.00 0.00 4.17
482 483 2.093235 AGAGAGAGTAAATGCAGGCACC 60.093 50.000 0.00 0.00 0.00 5.01
483 484 3.258971 AGAGAGAGTAAATGCAGGCAC 57.741 47.619 0.00 0.00 0.00 5.01
484 485 4.681781 GCTTAGAGAGAGTAAATGCAGGCA 60.682 45.833 0.00 0.00 0.00 4.75
485 486 3.807071 GCTTAGAGAGAGTAAATGCAGGC 59.193 47.826 0.00 0.00 0.00 4.85
486 487 5.068987 AGAGCTTAGAGAGAGTAAATGCAGG 59.931 44.000 0.00 0.00 0.00 4.85
487 488 6.039717 AGAGAGCTTAGAGAGAGTAAATGCAG 59.960 42.308 0.00 0.00 0.00 4.41
488 489 5.890985 AGAGAGCTTAGAGAGAGTAAATGCA 59.109 40.000 0.00 0.00 0.00 3.96
489 490 6.208644 CAGAGAGCTTAGAGAGAGTAAATGC 58.791 44.000 0.00 0.00 0.00 3.56
490 491 6.239008 CCCAGAGAGCTTAGAGAGAGTAAATG 60.239 46.154 0.00 0.00 0.00 2.32
491 492 5.833131 CCCAGAGAGCTTAGAGAGAGTAAAT 59.167 44.000 0.00 0.00 0.00 1.40
492 493 5.197451 CCCAGAGAGCTTAGAGAGAGTAAA 58.803 45.833 0.00 0.00 0.00 2.01
493 494 4.787551 CCCAGAGAGCTTAGAGAGAGTAA 58.212 47.826 0.00 0.00 0.00 2.24
494 495 3.434453 GCCCAGAGAGCTTAGAGAGAGTA 60.434 52.174 0.00 0.00 0.00 2.59
495 496 2.686715 GCCCAGAGAGCTTAGAGAGAGT 60.687 54.545 0.00 0.00 0.00 3.24
496 497 1.956477 GCCCAGAGAGCTTAGAGAGAG 59.044 57.143 0.00 0.00 0.00 3.20
497 498 1.748939 CGCCCAGAGAGCTTAGAGAGA 60.749 57.143 0.00 0.00 0.00 3.10
498 499 0.667993 CGCCCAGAGAGCTTAGAGAG 59.332 60.000 0.00 0.00 0.00 3.20
499 500 0.256177 TCGCCCAGAGAGCTTAGAGA 59.744 55.000 0.00 0.00 0.00 3.10
500 501 1.327303 ATCGCCCAGAGAGCTTAGAG 58.673 55.000 0.00 0.00 0.00 2.43
501 502 1.683917 GAATCGCCCAGAGAGCTTAGA 59.316 52.381 0.00 0.00 0.00 2.10
502 503 1.686052 AGAATCGCCCAGAGAGCTTAG 59.314 52.381 0.00 0.00 0.00 2.18
503 504 1.683917 GAGAATCGCCCAGAGAGCTTA 59.316 52.381 0.00 0.00 0.00 3.09
504 505 0.463620 GAGAATCGCCCAGAGAGCTT 59.536 55.000 0.00 0.00 0.00 3.74
505 506 1.398958 GGAGAATCGCCCAGAGAGCT 61.399 60.000 0.00 0.00 34.37 4.09
506 507 1.068921 GGAGAATCGCCCAGAGAGC 59.931 63.158 0.00 0.00 34.37 4.09
507 508 1.047002 ATGGAGAATCGCCCAGAGAG 58.953 55.000 0.00 0.00 35.67 3.20
508 509 1.139654 CAATGGAGAATCGCCCAGAGA 59.860 52.381 0.00 0.00 35.67 3.10
509 510 1.590932 CAATGGAGAATCGCCCAGAG 58.409 55.000 0.00 0.00 35.67 3.35
510 511 0.464373 GCAATGGAGAATCGCCCAGA 60.464 55.000 0.00 0.00 35.67 3.86
511 512 1.779025 CGCAATGGAGAATCGCCCAG 61.779 60.000 0.00 0.00 35.67 4.45
512 513 1.819208 CGCAATGGAGAATCGCCCA 60.819 57.895 0.00 0.00 34.37 5.36
513 514 0.886490 ATCGCAATGGAGAATCGCCC 60.886 55.000 0.00 0.00 34.37 6.13
514 515 0.947244 AATCGCAATGGAGAATCGCC 59.053 50.000 0.00 0.00 34.37 5.54
515 516 1.069636 GGAATCGCAATGGAGAATCGC 60.070 52.381 0.00 0.00 34.37 4.58
516 517 2.212652 TGGAATCGCAATGGAGAATCG 58.787 47.619 0.00 0.00 34.37 3.34
517 518 2.031333 GCTGGAATCGCAATGGAGAATC 60.031 50.000 0.00 0.00 0.00 2.52
518 519 1.952296 GCTGGAATCGCAATGGAGAAT 59.048 47.619 0.00 0.00 0.00 2.40
519 520 1.382522 GCTGGAATCGCAATGGAGAA 58.617 50.000 0.00 0.00 0.00 2.87
520 521 0.811219 CGCTGGAATCGCAATGGAGA 60.811 55.000 0.00 0.00 0.00 3.71
521 522 0.811219 TCGCTGGAATCGCAATGGAG 60.811 55.000 0.00 0.00 0.00 3.86
522 523 1.089481 GTCGCTGGAATCGCAATGGA 61.089 55.000 0.00 0.00 0.00 3.41
523 524 1.091771 AGTCGCTGGAATCGCAATGG 61.092 55.000 0.00 0.00 0.00 3.16
524 525 0.729116 AAGTCGCTGGAATCGCAATG 59.271 50.000 0.00 0.00 0.00 2.82
525 526 1.009829 GAAGTCGCTGGAATCGCAAT 58.990 50.000 0.00 0.00 0.00 3.56
526 527 0.037326 AGAAGTCGCTGGAATCGCAA 60.037 50.000 0.00 0.00 0.00 4.85
527 528 0.037326 AAGAAGTCGCTGGAATCGCA 60.037 50.000 0.00 0.00 0.00 5.10
528 529 0.647925 GAAGAAGTCGCTGGAATCGC 59.352 55.000 0.00 0.00 0.00 4.58
529 530 0.917259 CGAAGAAGTCGCTGGAATCG 59.083 55.000 0.00 0.00 44.14 3.34
539 540 2.416893 GCATCCCAAAGTCGAAGAAGTC 59.583 50.000 0.00 0.00 39.69 3.01
540 541 2.039084 AGCATCCCAAAGTCGAAGAAGT 59.961 45.455 0.00 0.00 39.69 3.01
541 542 2.417933 CAGCATCCCAAAGTCGAAGAAG 59.582 50.000 0.00 0.00 39.69 2.85
542 543 2.426522 CAGCATCCCAAAGTCGAAGAA 58.573 47.619 0.00 0.00 39.69 2.52
543 544 1.339055 CCAGCATCCCAAAGTCGAAGA 60.339 52.381 0.00 0.00 0.00 2.87
544 545 1.089920 CCAGCATCCCAAAGTCGAAG 58.910 55.000 0.00 0.00 0.00 3.79
545 546 0.690192 TCCAGCATCCCAAAGTCGAA 59.310 50.000 0.00 0.00 0.00 3.71
546 547 0.036388 GTCCAGCATCCCAAAGTCGA 60.036 55.000 0.00 0.00 0.00 4.20
547 548 1.026718 GGTCCAGCATCCCAAAGTCG 61.027 60.000 0.00 0.00 0.00 4.18
548 549 0.329596 AGGTCCAGCATCCCAAAGTC 59.670 55.000 0.00 0.00 0.00 3.01
549 550 0.779997 AAGGTCCAGCATCCCAAAGT 59.220 50.000 0.00 0.00 0.00 2.66
550 551 1.180029 CAAGGTCCAGCATCCCAAAG 58.820 55.000 0.00 0.00 0.00 2.77
551 552 0.482446 ACAAGGTCCAGCATCCCAAA 59.518 50.000 0.00 0.00 0.00 3.28
552 553 0.251297 CACAAGGTCCAGCATCCCAA 60.251 55.000 0.00 0.00 0.00 4.12
553 554 1.379916 CACAAGGTCCAGCATCCCA 59.620 57.895 0.00 0.00 0.00 4.37
554 555 1.379044 CCACAAGGTCCAGCATCCC 60.379 63.158 0.00 0.00 0.00 3.85
555 556 1.379044 CCCACAAGGTCCAGCATCC 60.379 63.158 0.00 0.00 0.00 3.51
556 557 2.048603 GCCCACAAGGTCCAGCATC 61.049 63.158 0.00 0.00 38.26 3.91
557 558 2.036256 GCCCACAAGGTCCAGCAT 59.964 61.111 0.00 0.00 38.26 3.79
558 559 3.177884 AGCCCACAAGGTCCAGCA 61.178 61.111 0.00 0.00 38.26 4.41
559 560 2.674380 CAGCCCACAAGGTCCAGC 60.674 66.667 0.00 0.00 38.26 4.85
560 561 1.002868 CTCAGCCCACAAGGTCCAG 60.003 63.158 0.00 0.00 38.26 3.86
561 562 2.528818 CCTCAGCCCACAAGGTCCA 61.529 63.158 0.00 0.00 38.26 4.02
562 563 1.198759 TACCTCAGCCCACAAGGTCC 61.199 60.000 0.00 0.00 42.41 4.46
563 564 0.250513 CTACCTCAGCCCACAAGGTC 59.749 60.000 0.00 0.00 42.41 3.85
564 565 1.201429 CCTACCTCAGCCCACAAGGT 61.201 60.000 0.00 0.00 45.30 3.50
565 566 1.201429 ACCTACCTCAGCCCACAAGG 61.201 60.000 0.00 0.00 39.47 3.61
566 567 0.036010 CACCTACCTCAGCCCACAAG 60.036 60.000 0.00 0.00 0.00 3.16
567 568 0.472925 TCACCTACCTCAGCCCACAA 60.473 55.000 0.00 0.00 0.00 3.33
568 569 1.157513 TCACCTACCTCAGCCCACA 59.842 57.895 0.00 0.00 0.00 4.17
569 570 0.905337 AGTCACCTACCTCAGCCCAC 60.905 60.000 0.00 0.00 0.00 4.61
570 571 0.178903 AAGTCACCTACCTCAGCCCA 60.179 55.000 0.00 0.00 0.00 5.36
571 572 1.861982 TAAGTCACCTACCTCAGCCC 58.138 55.000 0.00 0.00 0.00 5.19
572 573 2.034812 CGATAAGTCACCTACCTCAGCC 59.965 54.545 0.00 0.00 0.00 4.85
573 574 2.688958 ACGATAAGTCACCTACCTCAGC 59.311 50.000 0.00 0.00 0.00 4.26
586 587 4.950475 TGGATCTCTTGACAGACGATAAGT 59.050 41.667 0.00 0.00 0.00 2.24
587 588 5.506686 TGGATCTCTTGACAGACGATAAG 57.493 43.478 0.00 0.00 0.00 1.73
588 589 5.830457 AGATGGATCTCTTGACAGACGATAA 59.170 40.000 0.00 0.00 29.30 1.75
589 590 5.380900 AGATGGATCTCTTGACAGACGATA 58.619 41.667 0.00 0.00 29.30 2.92
590 591 4.214310 AGATGGATCTCTTGACAGACGAT 58.786 43.478 0.00 0.00 29.30 3.73
591 592 3.625853 AGATGGATCTCTTGACAGACGA 58.374 45.455 0.00 0.00 29.30 4.20
592 593 4.142293 TGAAGATGGATCTCTTGACAGACG 60.142 45.833 2.14 0.00 35.63 4.18
593 594 5.336150 TGAAGATGGATCTCTTGACAGAC 57.664 43.478 2.14 0.00 35.63 3.51
594 595 5.246883 TGTTGAAGATGGATCTCTTGACAGA 59.753 40.000 2.14 0.00 35.63 3.41
595 596 5.485620 TGTTGAAGATGGATCTCTTGACAG 58.514 41.667 2.14 0.00 35.63 3.51
596 597 5.488262 TGTTGAAGATGGATCTCTTGACA 57.512 39.130 2.14 4.77 35.63 3.58
597 598 6.998968 ATTGTTGAAGATGGATCTCTTGAC 57.001 37.500 2.14 2.64 35.63 3.18
598 599 7.855375 ACTATTGTTGAAGATGGATCTCTTGA 58.145 34.615 2.14 0.00 35.63 3.02
599 600 8.503458 AACTATTGTTGAAGATGGATCTCTTG 57.497 34.615 2.14 0.00 35.63 3.02
1203 1265 8.612145 AGGTTACCTAAATCCTACAATCAAACT 58.388 33.333 0.15 0.00 28.47 2.66
1445 1544 1.345415 CAGGCCCTTCAAAAGCAACAT 59.655 47.619 0.00 0.00 0.00 2.71
1478 1577 1.133668 GGACTGGGCAGCCATAGAAAT 60.134 52.381 15.19 0.00 0.00 2.17
1847 1960 5.818857 ACTCAATGCAAAGCTTGTCATTTTT 59.181 32.000 18.39 7.71 36.20 1.94
2058 2187 6.156949 AGCCTTCCTAGTGTTCTTGATGATAA 59.843 38.462 0.00 0.00 0.00 1.75
2582 2802 1.474330 CCTAGGGTTGCATTTGGTCC 58.526 55.000 0.00 0.00 0.00 4.46
2765 2986 2.032223 CCTCTGTGCTGCTGCTGT 59.968 61.111 17.00 0.00 40.48 4.40
2820 3050 1.004044 CCTCTTGTTGCTCATCCTGGT 59.996 52.381 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.