Multiple sequence alignment - TraesCS6B01G059000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G059000 chr6B 100.000 2869 0 0 1 2869 38970209 38973077 0.000000e+00 5299.0
1 TraesCS6B01G059000 chr6B 94.737 741 33 3 2135 2869 27127592 27128332 0.000000e+00 1147.0
2 TraesCS6B01G059000 chr6B 94.587 739 36 2 2135 2869 703395628 703394890 0.000000e+00 1140.0
3 TraesCS6B01G059000 chr6B 79.016 386 54 12 56 432 672203881 672203514 3.690000e-59 239.0
4 TraesCS6B01G059000 chr6D 90.893 1669 100 33 487 2135 24028646 24030282 0.000000e+00 2193.0
5 TraesCS6B01G059000 chr6A 95.196 1020 29 13 607 1619 22554825 22555831 0.000000e+00 1594.0
6 TraesCS6B01G059000 chr6A 89.706 476 30 11 1667 2135 22555911 22556374 8.850000e-165 590.0
7 TraesCS6B01G059000 chr4B 95.374 735 34 0 2135 2869 624136308 624137042 0.000000e+00 1170.0
8 TraesCS6B01G059000 chr4B 94.858 739 33 3 2135 2869 402980476 402981213 0.000000e+00 1149.0
9 TraesCS6B01G059000 chr7B 94.844 737 35 2 2135 2869 171136026 171136761 0.000000e+00 1147.0
10 TraesCS6B01G059000 chr7B 94.370 746 38 2 2128 2869 628724962 628725707 0.000000e+00 1142.0
11 TraesCS6B01G059000 chr7B 94.444 738 37 2 2135 2868 43650033 43649296 0.000000e+00 1133.0
12 TraesCS6B01G059000 chr7B 80.041 491 82 13 1122 1601 519524475 519523990 1.640000e-92 350.0
13 TraesCS6B01G059000 chr2B 94.708 737 36 2 2135 2869 767958610 767957875 0.000000e+00 1142.0
14 TraesCS6B01G059000 chr2B 94.848 427 21 1 1 427 615249951 615250376 0.000000e+00 665.0
15 TraesCS6B01G059000 chr2B 81.944 432 64 9 1 427 227592517 227592095 1.260000e-93 353.0
16 TraesCS6B01G059000 chr2B 86.084 309 33 6 1297 1603 42264520 42264820 9.910000e-85 324.0
17 TraesCS6B01G059000 chr4A 94.452 739 37 2 2135 2869 672644773 672645511 0.000000e+00 1134.0
18 TraesCS6B01G059000 chr3B 95.923 417 16 1 1 417 543696940 543696525 0.000000e+00 675.0
19 TraesCS6B01G059000 chr3B 98.367 245 4 0 1 245 696336793 696336549 5.680000e-117 431.0
20 TraesCS6B01G059000 chrUn 92.757 428 17 5 1 427 80133373 80133787 8.790000e-170 606.0
21 TraesCS6B01G059000 chrUn 92.740 427 18 4 1 427 223962496 223962083 3.160000e-169 604.0
22 TraesCS6B01G059000 chr5B 92.506 427 19 4 1 427 534864353 534863940 1.470000e-167 599.0
23 TraesCS6B01G059000 chr7D 91.121 428 25 4 1 428 346010374 346010788 4.150000e-158 568.0
24 TraesCS6B01G059000 chr7D 79.472 492 85 14 1122 1602 490881688 490881202 4.580000e-88 335.0
25 TraesCS6B01G059000 chr7D 90.909 44 1 2 1974 2015 529381946 529381988 3.990000e-04 56.5
26 TraesCS6B01G059000 chr2A 86.343 432 45 4 1 431 536500274 536499856 2.600000e-125 459.0
27 TraesCS6B01G059000 chr2A 84.365 307 42 3 1297 1603 29262266 29262566 2.160000e-76 296.0
28 TraesCS6B01G059000 chr7A 80.488 492 80 14 1122 1602 556921314 556920828 2.100000e-96 363.0
29 TraesCS6B01G059000 chr2D 82.222 135 18 3 1120 1254 27062506 27062634 8.400000e-21 111.0
30 TraesCS6B01G059000 chr5D 82.353 119 19 2 1384 1501 302105220 302105337 5.060000e-18 102.0
31 TraesCS6B01G059000 chr5A 81.513 119 20 2 1384 1501 395805343 395805226 2.350000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G059000 chr6B 38970209 38973077 2868 False 5299 5299 100.000 1 2869 1 chr6B.!!$F2 2868
1 TraesCS6B01G059000 chr6B 27127592 27128332 740 False 1147 1147 94.737 2135 2869 1 chr6B.!!$F1 734
2 TraesCS6B01G059000 chr6B 703394890 703395628 738 True 1140 1140 94.587 2135 2869 1 chr6B.!!$R2 734
3 TraesCS6B01G059000 chr6D 24028646 24030282 1636 False 2193 2193 90.893 487 2135 1 chr6D.!!$F1 1648
4 TraesCS6B01G059000 chr6A 22554825 22556374 1549 False 1092 1594 92.451 607 2135 2 chr6A.!!$F1 1528
5 TraesCS6B01G059000 chr4B 624136308 624137042 734 False 1170 1170 95.374 2135 2869 1 chr4B.!!$F2 734
6 TraesCS6B01G059000 chr4B 402980476 402981213 737 False 1149 1149 94.858 2135 2869 1 chr4B.!!$F1 734
7 TraesCS6B01G059000 chr7B 171136026 171136761 735 False 1147 1147 94.844 2135 2869 1 chr7B.!!$F1 734
8 TraesCS6B01G059000 chr7B 628724962 628725707 745 False 1142 1142 94.370 2128 2869 1 chr7B.!!$F2 741
9 TraesCS6B01G059000 chr7B 43649296 43650033 737 True 1133 1133 94.444 2135 2868 1 chr7B.!!$R1 733
10 TraesCS6B01G059000 chr2B 767957875 767958610 735 True 1142 1142 94.708 2135 2869 1 chr2B.!!$R2 734
11 TraesCS6B01G059000 chr4A 672644773 672645511 738 False 1134 1134 94.452 2135 2869 1 chr4A.!!$F1 734

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
302 303 0.035820 TGGTGGACCGTTGGATTAGC 60.036 55.0 0.00 0.0 39.43 3.09 F
328 329 0.174845 TACGGTCTGTATGCAGCCAC 59.825 55.0 18.85 8.9 42.29 5.01 F
995 999 0.178929 ATATGTCCTCCCCGAGACCC 60.179 60.0 0.00 0.0 0.00 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1603 1617 1.317431 ATGGCTACGTACGAGCACCA 61.317 55.000 28.30 24.44 41.98 4.17 R
1636 1674 1.745653 CTACAAGCTTTAAGCCTGGGC 59.254 52.381 18.27 3.00 43.77 5.36 R
2640 2702 1.595382 GCGCCAGCGGAATCAGTAT 60.595 57.895 14.63 0.00 40.19 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.220767 AGTTTACTTGTCATTTCTAATCTGTCC 57.779 33.333 0.00 0.00 0.00 4.02
33 34 7.827819 TTACTTGTCATTTCTAATCTGTCCG 57.172 36.000 0.00 0.00 0.00 4.79
34 35 5.794894 ACTTGTCATTTCTAATCTGTCCGT 58.205 37.500 0.00 0.00 0.00 4.69
35 36 6.231211 ACTTGTCATTTCTAATCTGTCCGTT 58.769 36.000 0.00 0.00 0.00 4.44
36 37 6.369065 ACTTGTCATTTCTAATCTGTCCGTTC 59.631 38.462 0.00 0.00 0.00 3.95
37 38 5.175859 TGTCATTTCTAATCTGTCCGTTCC 58.824 41.667 0.00 0.00 0.00 3.62
38 39 4.267928 GTCATTTCTAATCTGTCCGTTCCG 59.732 45.833 0.00 0.00 0.00 4.30
39 40 4.158949 TCATTTCTAATCTGTCCGTTCCGA 59.841 41.667 0.00 0.00 0.00 4.55
40 41 4.524316 TTTCTAATCTGTCCGTTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
41 42 3.777465 TCTAATCTGTCCGTTCCGAAG 57.223 47.619 0.00 0.00 0.00 3.79
42 43 2.159282 TCTAATCTGTCCGTTCCGAAGC 60.159 50.000 0.00 0.00 0.00 3.86
43 44 0.608640 AATCTGTCCGTTCCGAAGCT 59.391 50.000 0.00 0.00 0.00 3.74
44 45 0.108615 ATCTGTCCGTTCCGAAGCTG 60.109 55.000 0.00 0.00 0.00 4.24
45 46 2.357034 TGTCCGTTCCGAAGCTGC 60.357 61.111 0.00 0.00 0.00 5.25
46 47 2.357034 GTCCGTTCCGAAGCTGCA 60.357 61.111 1.02 0.00 0.00 4.41
47 48 1.741770 GTCCGTTCCGAAGCTGCAT 60.742 57.895 1.02 0.00 0.00 3.96
48 49 1.447838 TCCGTTCCGAAGCTGCATC 60.448 57.895 1.02 0.00 0.00 3.91
49 50 2.464459 CCGTTCCGAAGCTGCATCC 61.464 63.158 1.02 0.00 0.00 3.51
50 51 1.448540 CGTTCCGAAGCTGCATCCT 60.449 57.895 1.02 0.00 0.00 3.24
51 52 1.699656 CGTTCCGAAGCTGCATCCTG 61.700 60.000 1.02 0.00 0.00 3.86
52 53 1.746615 TTCCGAAGCTGCATCCTGC 60.747 57.895 1.02 0.00 45.29 4.85
72 73 4.509915 GCATGCTGCATGTGTTATTTTC 57.490 40.909 35.08 17.05 44.26 2.29
73 74 4.178540 GCATGCTGCATGTGTTATTTTCT 58.821 39.130 35.08 1.13 44.26 2.52
74 75 4.628333 GCATGCTGCATGTGTTATTTTCTT 59.372 37.500 35.08 0.68 44.26 2.52
75 76 5.220340 GCATGCTGCATGTGTTATTTTCTTC 60.220 40.000 35.08 15.81 44.26 2.87
76 77 5.710513 TGCTGCATGTGTTATTTTCTTCT 57.289 34.783 0.00 0.00 0.00 2.85
77 78 5.702865 TGCTGCATGTGTTATTTTCTTCTC 58.297 37.500 0.00 0.00 0.00 2.87
78 79 5.098211 GCTGCATGTGTTATTTTCTTCTCC 58.902 41.667 0.00 0.00 0.00 3.71
79 80 5.643379 TGCATGTGTTATTTTCTTCTCCC 57.357 39.130 0.00 0.00 0.00 4.30
80 81 5.324409 TGCATGTGTTATTTTCTTCTCCCT 58.676 37.500 0.00 0.00 0.00 4.20
81 82 5.415701 TGCATGTGTTATTTTCTTCTCCCTC 59.584 40.000 0.00 0.00 0.00 4.30
82 83 5.447818 GCATGTGTTATTTTCTTCTCCCTCG 60.448 44.000 0.00 0.00 0.00 4.63
83 84 5.223449 TGTGTTATTTTCTTCTCCCTCGT 57.777 39.130 0.00 0.00 0.00 4.18
84 85 5.235516 TGTGTTATTTTCTTCTCCCTCGTC 58.764 41.667 0.00 0.00 0.00 4.20
85 86 5.221561 TGTGTTATTTTCTTCTCCCTCGTCA 60.222 40.000 0.00 0.00 0.00 4.35
86 87 5.120363 GTGTTATTTTCTTCTCCCTCGTCAC 59.880 44.000 0.00 0.00 0.00 3.67
87 88 2.433868 TTTTCTTCTCCCTCGTCACG 57.566 50.000 0.00 0.00 0.00 4.35
88 89 1.325355 TTTCTTCTCCCTCGTCACGT 58.675 50.000 0.00 0.00 0.00 4.49
89 90 1.325355 TTCTTCTCCCTCGTCACGTT 58.675 50.000 0.00 0.00 0.00 3.99
90 91 0.596577 TCTTCTCCCTCGTCACGTTG 59.403 55.000 0.00 0.00 0.00 4.10
91 92 1.006571 TTCTCCCTCGTCACGTTGC 60.007 57.895 0.00 0.00 0.00 4.17
92 93 2.430382 TTCTCCCTCGTCACGTTGCC 62.430 60.000 0.00 0.00 0.00 4.52
93 94 2.915659 TCCCTCGTCACGTTGCCT 60.916 61.111 0.00 0.00 0.00 4.75
94 95 1.592400 CTCCCTCGTCACGTTGCCTA 61.592 60.000 0.00 0.00 0.00 3.93
95 96 1.153823 CCCTCGTCACGTTGCCTAG 60.154 63.158 0.00 0.00 0.00 3.02
96 97 1.585006 CCTCGTCACGTTGCCTAGT 59.415 57.895 0.00 0.00 0.00 2.57
97 98 0.806868 CCTCGTCACGTTGCCTAGTA 59.193 55.000 0.00 0.00 0.00 1.82
98 99 1.202154 CCTCGTCACGTTGCCTAGTAG 60.202 57.143 0.00 0.00 0.00 2.57
99 100 1.467734 CTCGTCACGTTGCCTAGTAGT 59.532 52.381 0.00 0.00 0.00 2.73
100 101 2.674852 CTCGTCACGTTGCCTAGTAGTA 59.325 50.000 0.00 0.00 0.00 1.82
101 102 2.674852 TCGTCACGTTGCCTAGTAGTAG 59.325 50.000 0.00 0.00 0.00 2.57
102 103 2.417933 CGTCACGTTGCCTAGTAGTAGT 59.582 50.000 3.91 0.00 0.00 2.73
103 104 3.618594 CGTCACGTTGCCTAGTAGTAGTA 59.381 47.826 3.91 0.00 0.00 1.82
104 105 4.493220 CGTCACGTTGCCTAGTAGTAGTAC 60.493 50.000 3.91 0.00 0.00 2.73
105 106 4.633565 GTCACGTTGCCTAGTAGTAGTACT 59.366 45.833 14.57 14.57 42.49 2.73
106 107 4.872691 TCACGTTGCCTAGTAGTAGTACTC 59.127 45.833 13.60 1.12 40.23 2.59
107 108 3.868077 ACGTTGCCTAGTAGTAGTACTCG 59.132 47.826 13.60 12.00 40.23 4.18
108 109 3.868077 CGTTGCCTAGTAGTAGTACTCGT 59.132 47.826 13.60 0.00 40.23 4.18
109 110 5.043903 CGTTGCCTAGTAGTAGTACTCGTA 58.956 45.833 13.60 2.93 40.23 3.43
110 111 5.051374 CGTTGCCTAGTAGTAGTACTCGTAC 60.051 48.000 13.60 2.39 40.23 3.67
112 113 6.227298 TGCCTAGTAGTAGTACTCGTACTT 57.773 41.667 13.60 1.52 43.35 2.24
113 114 6.045318 TGCCTAGTAGTAGTACTCGTACTTG 58.955 44.000 13.60 15.82 43.35 3.16
114 115 5.050431 GCCTAGTAGTAGTACTCGTACTTGC 60.050 48.000 13.60 16.48 43.35 4.01
115 116 5.465056 CCTAGTAGTAGTACTCGTACTTGCC 59.535 48.000 13.60 4.62 43.35 4.52
116 117 5.096443 AGTAGTAGTACTCGTACTTGCCT 57.904 43.478 14.26 10.56 43.35 4.75
117 118 4.874966 AGTAGTAGTACTCGTACTTGCCTG 59.125 45.833 14.26 0.00 43.35 4.85
118 119 3.015327 AGTAGTACTCGTACTTGCCTGG 58.985 50.000 14.26 0.00 43.35 4.45
119 120 0.531200 AGTACTCGTACTTGCCTGGC 59.469 55.000 12.87 12.87 43.35 4.85
120 121 0.245539 GTACTCGTACTTGCCTGGCA 59.754 55.000 19.30 19.30 36.47 4.92
121 122 1.134788 GTACTCGTACTTGCCTGGCAT 60.135 52.381 24.03 11.42 38.76 4.40
122 123 1.191535 ACTCGTACTTGCCTGGCATA 58.808 50.000 24.03 10.25 38.76 3.14
123 124 1.137086 ACTCGTACTTGCCTGGCATAG 59.863 52.381 24.03 22.40 38.76 2.23
124 125 1.137086 CTCGTACTTGCCTGGCATAGT 59.863 52.381 27.38 27.38 38.76 2.12
125 126 2.361119 CTCGTACTTGCCTGGCATAGTA 59.639 50.000 24.03 25.28 38.76 1.82
126 127 2.361119 TCGTACTTGCCTGGCATAGTAG 59.639 50.000 28.25 22.76 38.76 2.57
127 128 2.484889 GTACTTGCCTGGCATAGTAGC 58.515 52.381 28.25 22.04 38.76 3.58
128 129 1.207791 ACTTGCCTGGCATAGTAGCT 58.792 50.000 24.03 4.95 38.76 3.32
129 130 1.561542 ACTTGCCTGGCATAGTAGCTT 59.438 47.619 24.03 0.00 38.76 3.74
130 131 1.945394 CTTGCCTGGCATAGTAGCTTG 59.055 52.381 24.03 1.03 38.76 4.01
131 132 0.464373 TGCCTGGCATAGTAGCTTGC 60.464 55.000 19.30 0.00 38.14 4.01
132 133 0.464373 GCCTGGCATAGTAGCTTGCA 60.464 55.000 15.17 0.00 40.66 4.08
133 134 2.018644 GCCTGGCATAGTAGCTTGCAA 61.019 52.381 15.17 0.00 40.66 4.08
134 135 1.945394 CCTGGCATAGTAGCTTGCAAG 59.055 52.381 22.44 22.44 40.66 4.01
135 136 2.636830 CTGGCATAGTAGCTTGCAAGT 58.363 47.619 26.55 15.87 40.66 3.16
136 137 3.432186 CCTGGCATAGTAGCTTGCAAGTA 60.432 47.826 26.55 14.91 38.08 2.24
137 138 3.797039 TGGCATAGTAGCTTGCAAGTAG 58.203 45.455 26.55 3.69 40.66 2.57
138 139 3.197766 TGGCATAGTAGCTTGCAAGTAGT 59.802 43.478 26.55 20.13 40.66 2.73
139 140 4.404394 TGGCATAGTAGCTTGCAAGTAGTA 59.596 41.667 26.55 21.33 40.66 1.82
140 141 5.105106 TGGCATAGTAGCTTGCAAGTAGTAA 60.105 40.000 26.55 11.21 40.66 2.24
141 142 5.992217 GGCATAGTAGCTTGCAAGTAGTAAT 59.008 40.000 26.55 16.72 40.66 1.89
142 143 6.483640 GGCATAGTAGCTTGCAAGTAGTAATT 59.516 38.462 26.55 9.58 40.66 1.40
143 144 7.307455 GGCATAGTAGCTTGCAAGTAGTAATTC 60.307 40.741 26.55 8.21 40.66 2.17
144 145 7.224753 GCATAGTAGCTTGCAAGTAGTAATTCA 59.775 37.037 26.55 6.94 38.72 2.57
145 146 6.969828 AGTAGCTTGCAAGTAGTAATTCAC 57.030 37.500 26.55 6.78 0.00 3.18
146 147 6.702329 AGTAGCTTGCAAGTAGTAATTCACT 58.298 36.000 26.55 13.47 41.62 3.41
147 148 5.869753 AGCTTGCAAGTAGTAATTCACTG 57.130 39.130 26.55 0.00 38.24 3.66
148 149 5.308825 AGCTTGCAAGTAGTAATTCACTGT 58.691 37.500 26.55 0.00 38.24 3.55
149 150 6.464222 AGCTTGCAAGTAGTAATTCACTGTA 58.536 36.000 26.55 0.00 38.24 2.74
150 151 6.591834 AGCTTGCAAGTAGTAATTCACTGTAG 59.408 38.462 26.55 0.00 38.24 2.74
151 152 6.183360 GCTTGCAAGTAGTAATTCACTGTAGG 60.183 42.308 26.55 0.00 38.24 3.18
152 153 5.730550 TGCAAGTAGTAATTCACTGTAGGG 58.269 41.667 0.00 0.00 38.24 3.53
153 154 4.571176 GCAAGTAGTAATTCACTGTAGGGC 59.429 45.833 0.00 0.00 38.24 5.19
154 155 5.730550 CAAGTAGTAATTCACTGTAGGGCA 58.269 41.667 0.00 0.00 38.24 5.36
163 164 3.329300 CTGTAGGGCAGCACTTGTT 57.671 52.632 0.09 0.00 38.52 2.83
164 165 1.609208 CTGTAGGGCAGCACTTGTTT 58.391 50.000 0.09 0.00 38.52 2.83
165 166 2.778299 CTGTAGGGCAGCACTTGTTTA 58.222 47.619 0.09 0.00 38.52 2.01
166 167 2.484264 CTGTAGGGCAGCACTTGTTTAC 59.516 50.000 0.09 0.00 38.52 2.01
167 168 2.105821 TGTAGGGCAGCACTTGTTTACT 59.894 45.455 0.09 0.00 0.00 2.24
168 169 1.897560 AGGGCAGCACTTGTTTACTC 58.102 50.000 0.00 0.00 0.00 2.59
169 170 0.517316 GGGCAGCACTTGTTTACTCG 59.483 55.000 0.00 0.00 0.00 4.18
170 171 1.226746 GGCAGCACTTGTTTACTCGT 58.773 50.000 0.00 0.00 0.00 4.18
171 172 1.069906 GGCAGCACTTGTTTACTCGTG 60.070 52.381 0.00 0.00 0.00 4.35
172 173 1.864711 GCAGCACTTGTTTACTCGTGA 59.135 47.619 0.00 0.00 0.00 4.35
173 174 2.096713 GCAGCACTTGTTTACTCGTGAG 60.097 50.000 0.00 0.00 0.00 3.51
174 175 2.096713 CAGCACTTGTTTACTCGTGAGC 60.097 50.000 0.00 0.00 0.00 4.26
175 176 1.194772 GCACTTGTTTACTCGTGAGCC 59.805 52.381 0.00 0.00 0.00 4.70
176 177 2.755650 CACTTGTTTACTCGTGAGCCT 58.244 47.619 0.00 0.00 0.00 4.58
177 178 2.476619 CACTTGTTTACTCGTGAGCCTG 59.523 50.000 0.00 0.00 0.00 4.85
178 179 1.461127 CTTGTTTACTCGTGAGCCTGC 59.539 52.381 0.00 0.00 0.00 4.85
179 180 0.320421 TGTTTACTCGTGAGCCTGCC 60.320 55.000 0.00 0.00 0.00 4.85
180 181 0.320421 GTTTACTCGTGAGCCTGCCA 60.320 55.000 0.00 0.00 0.00 4.92
181 182 0.037326 TTTACTCGTGAGCCTGCCAG 60.037 55.000 0.00 0.00 0.00 4.85
182 183 0.898326 TTACTCGTGAGCCTGCCAGA 60.898 55.000 0.00 0.00 0.00 3.86
183 184 1.315981 TACTCGTGAGCCTGCCAGAG 61.316 60.000 0.00 0.00 0.00 3.35
184 185 2.283173 TCGTGAGCCTGCCAGAGA 60.283 61.111 0.00 0.00 0.00 3.10
185 186 1.674764 CTCGTGAGCCTGCCAGAGAT 61.675 60.000 0.00 0.00 0.00 2.75
186 187 1.220206 CGTGAGCCTGCCAGAGATT 59.780 57.895 0.00 0.00 0.00 2.40
187 188 0.392193 CGTGAGCCTGCCAGAGATTT 60.392 55.000 0.00 0.00 0.00 2.17
188 189 1.377536 GTGAGCCTGCCAGAGATTTC 58.622 55.000 0.00 0.00 0.00 2.17
189 190 1.065564 GTGAGCCTGCCAGAGATTTCT 60.066 52.381 0.00 0.00 0.00 2.52
190 191 2.169352 GTGAGCCTGCCAGAGATTTCTA 59.831 50.000 0.00 0.00 30.73 2.10
191 192 2.433604 TGAGCCTGCCAGAGATTTCTAG 59.566 50.000 0.00 0.00 30.73 2.43
192 193 1.767681 AGCCTGCCAGAGATTTCTAGG 59.232 52.381 0.00 0.00 32.15 3.02
193 194 1.202746 GCCTGCCAGAGATTTCTAGGG 60.203 57.143 0.00 0.00 30.43 3.53
194 195 2.402564 CCTGCCAGAGATTTCTAGGGA 58.597 52.381 0.00 0.00 30.73 4.20
195 196 2.368221 CCTGCCAGAGATTTCTAGGGAG 59.632 54.545 12.78 12.78 38.53 4.30
196 197 1.765314 TGCCAGAGATTTCTAGGGAGC 59.235 52.381 0.00 0.00 30.73 4.70
197 198 1.270041 GCCAGAGATTTCTAGGGAGCG 60.270 57.143 0.00 0.00 30.73 5.03
198 199 1.342819 CCAGAGATTTCTAGGGAGCGG 59.657 57.143 0.00 0.00 30.73 5.52
199 200 2.035632 CAGAGATTTCTAGGGAGCGGT 58.964 52.381 0.00 0.00 30.73 5.68
200 201 2.035632 AGAGATTTCTAGGGAGCGGTG 58.964 52.381 0.00 0.00 0.00 4.94
201 202 0.466124 AGATTTCTAGGGAGCGGTGC 59.534 55.000 0.00 0.00 0.00 5.01
202 203 0.533085 GATTTCTAGGGAGCGGTGCC 60.533 60.000 18.43 18.43 0.00 5.01
203 204 1.984288 ATTTCTAGGGAGCGGTGCCC 61.984 60.000 22.39 16.78 46.40 5.36
208 209 3.480133 GGGAGCGGTGCCCAGTAT 61.480 66.667 15.06 0.00 45.31 2.12
209 210 2.203070 GGAGCGGTGCCCAGTATG 60.203 66.667 0.00 0.00 0.00 2.39
223 224 1.789464 CAGTATGGAAGAATCGCGAGC 59.211 52.381 16.66 9.48 0.00 5.03
224 225 1.140816 GTATGGAAGAATCGCGAGCC 58.859 55.000 16.66 8.80 0.00 4.70
225 226 1.040646 TATGGAAGAATCGCGAGCCT 58.959 50.000 16.66 11.23 0.00 4.58
226 227 0.531532 ATGGAAGAATCGCGAGCCTG 60.532 55.000 16.66 0.00 0.00 4.85
227 228 2.529619 GGAAGAATCGCGAGCCTGC 61.530 63.158 16.66 12.34 0.00 4.85
228 229 1.811266 GAAGAATCGCGAGCCTGCA 60.811 57.895 16.66 0.00 34.15 4.41
229 230 1.153289 AAGAATCGCGAGCCTGCAT 60.153 52.632 16.66 0.00 34.15 3.96
230 231 1.434622 AAGAATCGCGAGCCTGCATG 61.435 55.000 16.66 0.00 34.15 4.06
231 232 3.518293 GAATCGCGAGCCTGCATGC 62.518 63.158 16.66 11.82 34.15 4.06
232 233 4.843719 ATCGCGAGCCTGCATGCA 62.844 61.111 21.29 21.29 34.15 3.96
237 238 3.807538 GAGCCTGCATGCACGGTG 61.808 66.667 26.61 15.31 0.00 4.94
238 239 4.648626 AGCCTGCATGCACGGTGT 62.649 61.111 26.61 16.96 0.00 4.16
239 240 4.107051 GCCTGCATGCACGGTGTC 62.107 66.667 26.61 13.72 0.00 3.67
240 241 2.669229 CCTGCATGCACGGTGTCA 60.669 61.111 18.46 8.69 0.00 3.58
241 242 2.683859 CCTGCATGCACGGTGTCAG 61.684 63.158 18.46 4.12 0.00 3.51
242 243 2.669229 TGCATGCACGGTGTCAGG 60.669 61.111 18.46 10.76 0.00 3.86
243 244 2.669569 GCATGCACGGTGTCAGGT 60.670 61.111 14.21 0.00 0.00 4.00
244 245 2.260869 GCATGCACGGTGTCAGGTT 61.261 57.895 14.21 0.00 0.00 3.50
245 246 1.575922 CATGCACGGTGTCAGGTTG 59.424 57.895 10.24 1.03 0.00 3.77
246 247 1.600636 ATGCACGGTGTCAGGTTGG 60.601 57.895 10.24 0.00 0.00 3.77
247 248 3.660111 GCACGGTGTCAGGTTGGC 61.660 66.667 10.24 0.00 0.00 4.52
248 249 2.203139 CACGGTGTCAGGTTGGCA 60.203 61.111 0.00 0.00 0.00 4.92
249 250 2.111043 ACGGTGTCAGGTTGGCAG 59.889 61.111 0.00 0.00 29.65 4.85
250 251 3.357079 CGGTGTCAGGTTGGCAGC 61.357 66.667 2.98 2.98 45.96 5.25
252 253 3.034030 GTGTCAGGTTGGCAGCAC 58.966 61.111 3.14 0.00 29.65 4.40
253 254 1.823470 GTGTCAGGTTGGCAGCACA 60.823 57.895 3.14 0.00 29.65 4.57
254 255 1.077140 TGTCAGGTTGGCAGCACAA 60.077 52.632 3.14 0.00 0.00 3.33
255 256 1.102809 TGTCAGGTTGGCAGCACAAG 61.103 55.000 3.14 0.00 0.00 3.16
256 257 1.529010 TCAGGTTGGCAGCACAAGG 60.529 57.895 3.14 0.00 0.00 3.61
257 258 1.529010 CAGGTTGGCAGCACAAGGA 60.529 57.895 3.14 0.00 0.00 3.36
258 259 0.896940 CAGGTTGGCAGCACAAGGAT 60.897 55.000 3.14 0.00 0.00 3.24
259 260 0.896940 AGGTTGGCAGCACAAGGATG 60.897 55.000 3.14 0.00 35.52 3.51
260 261 1.588082 GTTGGCAGCACAAGGATGG 59.412 57.895 0.00 0.00 32.19 3.51
261 262 1.153524 TTGGCAGCACAAGGATGGT 59.846 52.632 0.00 0.00 32.19 3.55
262 263 0.895100 TTGGCAGCACAAGGATGGTC 60.895 55.000 0.00 0.00 32.19 4.02
263 264 1.303561 GGCAGCACAAGGATGGTCA 60.304 57.895 0.00 0.00 32.19 4.02
264 265 1.589716 GGCAGCACAAGGATGGTCAC 61.590 60.000 0.00 0.00 32.19 3.67
265 266 1.589716 GCAGCACAAGGATGGTCACC 61.590 60.000 0.00 0.00 32.19 4.02
266 267 0.962356 CAGCACAAGGATGGTCACCC 60.962 60.000 0.00 0.00 0.00 4.61
268 269 1.244019 GCACAAGGATGGTCACCCAC 61.244 60.000 0.00 0.00 45.65 4.61
269 270 0.955428 CACAAGGATGGTCACCCACG 60.955 60.000 0.00 0.00 45.65 4.94
270 271 1.377202 CAAGGATGGTCACCCACGG 60.377 63.158 0.00 0.00 45.65 4.94
271 272 3.268103 AAGGATGGTCACCCACGGC 62.268 63.158 0.00 0.00 45.65 5.68
273 274 4.077184 GATGGTCACCCACGGCGA 62.077 66.667 16.62 0.00 45.65 5.54
274 275 3.599285 GATGGTCACCCACGGCGAA 62.599 63.158 16.62 0.00 45.65 4.70
275 276 2.869503 GATGGTCACCCACGGCGAAT 62.870 60.000 16.62 0.00 45.65 3.34
276 277 2.818274 GGTCACCCACGGCGAATC 60.818 66.667 16.62 0.00 0.00 2.52
277 278 2.818274 GTCACCCACGGCGAATCC 60.818 66.667 16.62 0.00 0.00 3.01
278 279 4.090588 TCACCCACGGCGAATCCC 62.091 66.667 16.62 0.00 0.00 3.85
279 280 4.096003 CACCCACGGCGAATCCCT 62.096 66.667 16.62 0.00 0.00 4.20
280 281 4.096003 ACCCACGGCGAATCCCTG 62.096 66.667 16.62 0.00 0.00 4.45
282 283 4.776322 CCACGGCGAATCCCTGCA 62.776 66.667 16.62 0.00 0.00 4.41
283 284 2.514592 CACGGCGAATCCCTGCAT 60.515 61.111 16.62 0.00 0.00 3.96
284 285 2.514592 ACGGCGAATCCCTGCATG 60.515 61.111 16.62 0.00 0.00 4.06
285 286 3.282157 CGGCGAATCCCTGCATGG 61.282 66.667 0.00 0.78 0.00 3.66
286 287 2.124151 GGCGAATCCCTGCATGGT 60.124 61.111 7.98 0.00 0.00 3.55
287 288 2.484062 GGCGAATCCCTGCATGGTG 61.484 63.158 7.98 0.00 0.00 4.17
288 289 2.484062 GCGAATCCCTGCATGGTGG 61.484 63.158 7.98 0.00 0.00 4.61
289 290 1.224315 CGAATCCCTGCATGGTGGA 59.776 57.895 7.98 2.54 0.00 4.02
290 291 1.097547 CGAATCCCTGCATGGTGGAC 61.098 60.000 7.98 0.00 0.00 4.02
291 292 0.753111 GAATCCCTGCATGGTGGACC 60.753 60.000 7.98 0.00 0.00 4.46
292 293 2.556840 AATCCCTGCATGGTGGACCG 62.557 60.000 7.98 0.00 39.43 4.79
293 294 4.033776 CCCTGCATGGTGGACCGT 62.034 66.667 0.00 0.00 39.43 4.83
294 295 2.034066 CCTGCATGGTGGACCGTT 59.966 61.111 0.00 0.00 39.43 4.44
295 296 2.334946 CCTGCATGGTGGACCGTTG 61.335 63.158 0.00 0.00 39.43 4.10
296 297 2.282110 TGCATGGTGGACCGTTGG 60.282 61.111 0.00 0.00 39.43 3.77
297 298 2.033448 GCATGGTGGACCGTTGGA 59.967 61.111 0.00 0.00 39.43 3.53
298 299 1.378514 GCATGGTGGACCGTTGGAT 60.379 57.895 0.00 0.00 39.43 3.41
299 300 0.965363 GCATGGTGGACCGTTGGATT 60.965 55.000 0.00 0.00 39.43 3.01
300 301 1.680555 GCATGGTGGACCGTTGGATTA 60.681 52.381 0.00 0.00 39.43 1.75
301 302 2.288666 CATGGTGGACCGTTGGATTAG 58.711 52.381 0.00 0.00 39.43 1.73
302 303 0.035820 TGGTGGACCGTTGGATTAGC 60.036 55.000 0.00 0.00 39.43 3.09
303 304 0.746923 GGTGGACCGTTGGATTAGCC 60.747 60.000 0.00 0.00 37.10 3.93
304 305 0.746923 GTGGACCGTTGGATTAGCCC 60.747 60.000 0.00 0.00 34.97 5.19
305 306 1.202099 TGGACCGTTGGATTAGCCCA 61.202 55.000 0.00 0.00 34.97 5.36
306 307 0.182775 GGACCGTTGGATTAGCCCAT 59.817 55.000 0.00 0.00 35.87 4.00
307 308 1.594331 GACCGTTGGATTAGCCCATC 58.406 55.000 0.00 0.00 35.87 3.51
308 309 0.916086 ACCGTTGGATTAGCCCATCA 59.084 50.000 0.00 0.00 35.87 3.07
309 310 1.494721 ACCGTTGGATTAGCCCATCAT 59.505 47.619 0.00 0.00 35.87 2.45
310 311 2.708861 ACCGTTGGATTAGCCCATCATA 59.291 45.455 0.00 0.00 35.87 2.15
311 312 3.074412 CCGTTGGATTAGCCCATCATAC 58.926 50.000 0.00 0.00 35.87 2.39
312 313 2.736721 CGTTGGATTAGCCCATCATACG 59.263 50.000 0.00 0.00 35.87 3.06
313 314 3.074412 GTTGGATTAGCCCATCATACGG 58.926 50.000 0.00 0.00 35.87 4.02
314 315 2.334977 TGGATTAGCCCATCATACGGT 58.665 47.619 0.00 0.00 34.97 4.83
315 316 2.301870 TGGATTAGCCCATCATACGGTC 59.698 50.000 0.00 0.00 34.97 4.79
316 317 2.567615 GGATTAGCCCATCATACGGTCT 59.432 50.000 0.00 0.00 0.00 3.85
317 318 3.589988 GATTAGCCCATCATACGGTCTG 58.410 50.000 0.00 0.00 0.00 3.51
318 319 2.082140 TAGCCCATCATACGGTCTGT 57.918 50.000 0.00 0.00 0.00 3.41
319 320 2.082140 AGCCCATCATACGGTCTGTA 57.918 50.000 0.00 0.00 37.49 2.74
320 321 2.609747 AGCCCATCATACGGTCTGTAT 58.390 47.619 0.00 0.00 44.73 2.29
326 327 3.989104 ATACGGTCTGTATGCAGCC 57.011 52.632 5.85 9.67 42.24 4.85
327 328 1.119684 ATACGGTCTGTATGCAGCCA 58.880 50.000 18.85 6.12 42.24 4.75
328 329 0.174845 TACGGTCTGTATGCAGCCAC 59.825 55.000 18.85 8.90 42.29 5.01
329 330 2.167219 CGGTCTGTATGCAGCCACG 61.167 63.158 18.85 13.30 42.29 4.94
330 331 1.079127 GGTCTGTATGCAGCCACGT 60.079 57.895 15.69 0.00 42.29 4.49
331 332 0.174845 GGTCTGTATGCAGCCACGTA 59.825 55.000 15.69 0.00 42.29 3.57
332 333 1.560923 GTCTGTATGCAGCCACGTAG 58.439 55.000 5.85 0.00 42.29 3.51
333 334 0.179111 TCTGTATGCAGCCACGTAGC 60.179 55.000 5.85 0.00 42.29 3.58
334 335 1.153449 TGTATGCAGCCACGTAGCC 60.153 57.895 1.24 0.00 0.00 3.93
335 336 1.887707 GTATGCAGCCACGTAGCCC 60.888 63.158 1.24 0.00 0.00 5.19
336 337 2.063979 TATGCAGCCACGTAGCCCT 61.064 57.895 1.24 0.00 0.00 5.19
337 338 2.028125 TATGCAGCCACGTAGCCCTC 62.028 60.000 1.24 0.00 0.00 4.30
338 339 3.775654 GCAGCCACGTAGCCCTCT 61.776 66.667 1.24 0.00 0.00 3.69
339 340 2.496817 CAGCCACGTAGCCCTCTC 59.503 66.667 1.24 0.00 0.00 3.20
340 341 2.055042 CAGCCACGTAGCCCTCTCT 61.055 63.158 1.24 0.00 0.00 3.10
341 342 1.755008 AGCCACGTAGCCCTCTCTC 60.755 63.158 1.24 0.00 0.00 3.20
342 343 2.787567 GCCACGTAGCCCTCTCTCC 61.788 68.421 0.00 0.00 0.00 3.71
343 344 1.379977 CCACGTAGCCCTCTCTCCA 60.380 63.158 0.00 0.00 0.00 3.86
344 345 0.970937 CCACGTAGCCCTCTCTCCAA 60.971 60.000 0.00 0.00 0.00 3.53
345 346 0.895530 CACGTAGCCCTCTCTCCAAA 59.104 55.000 0.00 0.00 0.00 3.28
346 347 1.275291 CACGTAGCCCTCTCTCCAAAA 59.725 52.381 0.00 0.00 0.00 2.44
347 348 1.275573 ACGTAGCCCTCTCTCCAAAAC 59.724 52.381 0.00 0.00 0.00 2.43
348 349 1.275291 CGTAGCCCTCTCTCCAAAACA 59.725 52.381 0.00 0.00 0.00 2.83
349 350 2.289444 CGTAGCCCTCTCTCCAAAACAA 60.289 50.000 0.00 0.00 0.00 2.83
350 351 3.619979 CGTAGCCCTCTCTCCAAAACAAT 60.620 47.826 0.00 0.00 0.00 2.71
351 352 3.078891 AGCCCTCTCTCCAAAACAATC 57.921 47.619 0.00 0.00 0.00 2.67
352 353 1.740025 GCCCTCTCTCCAAAACAATCG 59.260 52.381 0.00 0.00 0.00 3.34
353 354 2.615493 GCCCTCTCTCCAAAACAATCGA 60.615 50.000 0.00 0.00 0.00 3.59
354 355 3.674997 CCCTCTCTCCAAAACAATCGAA 58.325 45.455 0.00 0.00 0.00 3.71
355 356 4.265073 CCCTCTCTCCAAAACAATCGAAT 58.735 43.478 0.00 0.00 0.00 3.34
356 357 5.428253 CCCTCTCTCCAAAACAATCGAATA 58.572 41.667 0.00 0.00 0.00 1.75
357 358 6.058183 CCCTCTCTCCAAAACAATCGAATAT 58.942 40.000 0.00 0.00 0.00 1.28
358 359 6.017605 CCCTCTCTCCAAAACAATCGAATATG 60.018 42.308 0.00 0.00 0.00 1.78
359 360 6.763135 CCTCTCTCCAAAACAATCGAATATGA 59.237 38.462 0.00 0.00 0.00 2.15
360 361 7.280876 CCTCTCTCCAAAACAATCGAATATGAA 59.719 37.037 0.00 0.00 0.00 2.57
361 362 7.974675 TCTCTCCAAAACAATCGAATATGAAC 58.025 34.615 0.00 0.00 0.00 3.18
362 363 7.065803 TCTCTCCAAAACAATCGAATATGAACC 59.934 37.037 0.00 0.00 0.00 3.62
363 364 5.874831 TCCAAAACAATCGAATATGAACCG 58.125 37.500 0.00 0.00 0.00 4.44
364 365 5.413213 TCCAAAACAATCGAATATGAACCGT 59.587 36.000 0.00 0.00 0.00 4.83
365 366 6.072397 TCCAAAACAATCGAATATGAACCGTT 60.072 34.615 0.00 0.00 0.00 4.44
366 367 6.033407 CCAAAACAATCGAATATGAACCGTTG 59.967 38.462 0.00 0.00 0.00 4.10
367 368 4.875544 ACAATCGAATATGAACCGTTGG 57.124 40.909 0.00 0.00 0.00 3.77
368 369 4.509616 ACAATCGAATATGAACCGTTGGA 58.490 39.130 0.00 0.00 0.00 3.53
369 370 5.123227 ACAATCGAATATGAACCGTTGGAT 58.877 37.500 0.00 0.00 0.00 3.41
370 371 5.588648 ACAATCGAATATGAACCGTTGGATT 59.411 36.000 0.00 0.00 32.77 3.01
371 372 6.764085 ACAATCGAATATGAACCGTTGGATTA 59.236 34.615 0.00 0.00 31.82 1.75
372 373 6.780706 ATCGAATATGAACCGTTGGATTAC 57.219 37.500 0.00 0.00 0.00 1.89
373 374 5.662456 TCGAATATGAACCGTTGGATTACA 58.338 37.500 0.00 0.00 0.00 2.41
374 375 6.107343 TCGAATATGAACCGTTGGATTACAA 58.893 36.000 0.00 0.00 36.54 2.41
375 376 6.594547 TCGAATATGAACCGTTGGATTACAAA 59.405 34.615 0.00 0.00 41.58 2.83
376 377 6.905076 CGAATATGAACCGTTGGATTACAAAG 59.095 38.462 0.00 0.00 41.58 2.77
377 378 7.201574 CGAATATGAACCGTTGGATTACAAAGA 60.202 37.037 0.00 0.00 41.58 2.52
378 379 8.519799 AATATGAACCGTTGGATTACAAAGAT 57.480 30.769 0.00 0.00 41.58 2.40
379 380 6.834168 ATGAACCGTTGGATTACAAAGATT 57.166 33.333 0.00 0.00 41.58 2.40
380 381 6.249035 TGAACCGTTGGATTACAAAGATTC 57.751 37.500 0.00 0.00 40.30 2.52
381 382 5.765677 TGAACCGTTGGATTACAAAGATTCA 59.234 36.000 0.62 0.62 45.09 2.57
382 383 6.263392 TGAACCGTTGGATTACAAAGATTCAA 59.737 34.615 2.19 0.00 44.58 2.69
383 384 6.834168 ACCGTTGGATTACAAAGATTCAAT 57.166 33.333 0.00 0.00 41.58 2.57
384 385 6.620678 ACCGTTGGATTACAAAGATTCAATG 58.379 36.000 0.00 0.00 41.58 2.82
385 386 6.035843 CCGTTGGATTACAAAGATTCAATGG 58.964 40.000 2.81 2.81 40.81 3.16
386 387 6.350110 CCGTTGGATTACAAAGATTCAATGGT 60.350 38.462 7.81 0.00 41.36 3.55
387 388 6.747280 CGTTGGATTACAAAGATTCAATGGTC 59.253 38.462 0.00 0.00 41.58 4.02
388 389 6.773976 TGGATTACAAAGATTCAATGGTCC 57.226 37.500 0.00 0.00 0.00 4.46
389 390 6.252233 TGGATTACAAAGATTCAATGGTCCA 58.748 36.000 0.00 0.00 0.00 4.02
390 391 6.896860 TGGATTACAAAGATTCAATGGTCCAT 59.103 34.615 0.00 0.00 0.00 3.41
391 392 8.058235 TGGATTACAAAGATTCAATGGTCCATA 58.942 33.333 4.33 0.00 0.00 2.74
392 393 9.082313 GGATTACAAAGATTCAATGGTCCATAT 57.918 33.333 4.33 0.00 0.00 1.78
395 396 7.823745 ACAAAGATTCAATGGTCCATATACC 57.176 36.000 4.33 0.00 40.19 2.73
396 397 7.586349 ACAAAGATTCAATGGTCCATATACCT 58.414 34.615 4.33 0.00 40.44 3.08
397 398 8.061304 ACAAAGATTCAATGGTCCATATACCTT 58.939 33.333 4.33 3.12 40.44 3.50
398 399 8.355169 CAAAGATTCAATGGTCCATATACCTTG 58.645 37.037 4.33 0.00 40.44 3.61
399 400 7.392766 AGATTCAATGGTCCATATACCTTGA 57.607 36.000 4.33 1.85 40.44 3.02
400 401 7.993416 AGATTCAATGGTCCATATACCTTGAT 58.007 34.615 4.33 0.00 40.44 2.57
401 402 9.116080 AGATTCAATGGTCCATATACCTTGATA 57.884 33.333 4.33 0.00 40.44 2.15
402 403 9.911788 GATTCAATGGTCCATATACCTTGATAT 57.088 33.333 4.33 2.32 40.44 1.63
404 405 9.739276 TTCAATGGTCCATATACCTTGATATTC 57.261 33.333 4.33 0.00 40.44 1.75
405 406 8.040727 TCAATGGTCCATATACCTTGATATTCG 58.959 37.037 4.33 0.00 40.44 3.34
406 407 6.928348 TGGTCCATATACCTTGATATTCGT 57.072 37.500 0.00 0.00 40.44 3.85
407 408 8.603898 ATGGTCCATATACCTTGATATTCGTA 57.396 34.615 1.24 0.00 40.44 3.43
408 409 8.603898 TGGTCCATATACCTTGATATTCGTAT 57.396 34.615 0.00 0.00 40.44 3.06
409 410 9.703677 TGGTCCATATACCTTGATATTCGTATA 57.296 33.333 0.00 0.00 40.44 1.47
410 411 9.962783 GGTCCATATACCTTGATATTCGTATAC 57.037 37.037 0.00 0.00 36.53 1.47
461 462 8.687242 ACACTATATTGATGGTAGATACATCCG 58.313 37.037 0.00 0.00 43.10 4.18
462 463 8.687242 CACTATATTGATGGTAGATACATCCGT 58.313 37.037 0.00 0.00 43.10 4.69
463 464 9.256228 ACTATATTGATGGTAGATACATCCGTT 57.744 33.333 0.00 0.00 43.10 4.44
465 466 8.777865 ATATTGATGGTAGATACATCCGTTTG 57.222 34.615 0.00 0.00 43.10 2.93
466 467 5.862678 TGATGGTAGATACATCCGTTTGA 57.137 39.130 0.00 0.00 43.10 2.69
467 468 5.842907 TGATGGTAGATACATCCGTTTGAG 58.157 41.667 0.00 0.00 43.10 3.02
468 469 4.665833 TGGTAGATACATCCGTTTGAGG 57.334 45.455 0.00 0.00 0.00 3.86
469 470 4.283337 TGGTAGATACATCCGTTTGAGGA 58.717 43.478 0.00 0.00 45.54 3.71
470 471 4.098960 TGGTAGATACATCCGTTTGAGGAC 59.901 45.833 0.00 0.00 44.07 3.85
471 472 4.098960 GGTAGATACATCCGTTTGAGGACA 59.901 45.833 0.00 0.00 44.07 4.02
472 473 4.819105 AGATACATCCGTTTGAGGACAA 57.181 40.909 0.00 0.00 44.07 3.18
473 474 5.160607 AGATACATCCGTTTGAGGACAAA 57.839 39.130 0.00 0.00 44.07 2.83
552 554 7.830697 TGCACCATATATAATCTGAAATGGAGG 59.169 37.037 6.18 0.03 37.80 4.30
571 573 2.115343 GGAGTACCCAGCTCAAAAGG 57.885 55.000 0.00 0.00 34.83 3.11
637 641 1.366319 AGCTCAGTCCAACCTCCAAT 58.634 50.000 0.00 0.00 0.00 3.16
703 707 2.983592 CCCGTTTGCCGAAAGCCT 60.984 61.111 0.00 0.00 42.71 4.58
711 715 2.776072 CCGAAAGCCTACGCAACG 59.224 61.111 0.00 0.00 37.52 4.10
786 790 1.569479 GAGTTGGCCTTGTGCTCGAC 61.569 60.000 3.32 0.00 40.92 4.20
787 791 1.598130 GTTGGCCTTGTGCTCGACT 60.598 57.895 3.32 0.00 40.92 4.18
788 792 1.301716 TTGGCCTTGTGCTCGACTC 60.302 57.895 3.32 0.00 40.92 3.36
789 793 2.811317 GGCCTTGTGCTCGACTCG 60.811 66.667 0.00 0.00 40.92 4.18
790 794 2.258591 GCCTTGTGCTCGACTCGA 59.741 61.111 0.29 0.29 36.87 4.04
873 877 2.198703 ATCCGGCGGATCCAGAGA 59.801 61.111 34.54 9.10 38.09 3.10
875 879 2.648613 ATCCGGCGGATCCAGAGACT 62.649 60.000 34.54 11.59 38.09 3.24
876 880 2.725008 CGGCGGATCCAGAGACTC 59.275 66.667 13.41 0.00 34.01 3.36
877 881 2.851071 CGGCGGATCCAGAGACTCC 61.851 68.421 13.41 0.00 34.01 3.85
879 883 1.739049 GCGGATCCAGAGACTCCAG 59.261 63.158 13.41 0.00 0.00 3.86
880 884 0.753479 GCGGATCCAGAGACTCCAGA 60.753 60.000 13.41 0.00 0.00 3.86
881 885 1.993956 CGGATCCAGAGACTCCAGAT 58.006 55.000 13.41 1.59 0.00 2.90
923 927 3.953775 CCCACACGCACCTTCCCT 61.954 66.667 0.00 0.00 0.00 4.20
980 984 0.321671 CCCGTCCAGGCACCTATATG 59.678 60.000 0.00 0.00 39.21 1.78
990 994 1.826042 GCACCTATATGTCCTCCCCGA 60.826 57.143 0.00 0.00 0.00 5.14
991 995 2.171840 CACCTATATGTCCTCCCCGAG 58.828 57.143 0.00 0.00 0.00 4.63
992 996 2.071372 ACCTATATGTCCTCCCCGAGA 58.929 52.381 0.00 0.00 0.00 4.04
993 997 2.225066 ACCTATATGTCCTCCCCGAGAC 60.225 54.545 0.00 0.00 0.00 3.36
994 998 2.448453 CTATATGTCCTCCCCGAGACC 58.552 57.143 0.00 0.00 0.00 3.85
995 999 0.178929 ATATGTCCTCCCCGAGACCC 60.179 60.000 0.00 0.00 0.00 4.46
996 1000 2.308118 TATGTCCTCCCCGAGACCCC 62.308 65.000 0.00 0.00 0.00 4.95
1024 1034 3.181456 CCTCCTCCTCCATTCATTCTCAC 60.181 52.174 0.00 0.00 0.00 3.51
1060 1070 8.187480 CGAACTTCTAATCAATCTTCTCAGAGA 58.813 37.037 0.00 0.00 30.36 3.10
1101 1115 3.267860 CCTGCTTGCCGCTCGATC 61.268 66.667 0.00 0.00 40.11 3.69
1603 1617 1.705337 GCATGCGCCGTCATGTAGTT 61.705 55.000 18.04 0.00 44.20 2.24
1636 1674 0.749454 AGCCATCTTTTAGCCAGGCG 60.749 55.000 5.55 0.00 46.34 5.52
1637 1675 1.729881 CCATCTTTTAGCCAGGCGC 59.270 57.895 5.55 0.00 37.98 6.53
1638 1676 1.728490 CCATCTTTTAGCCAGGCGCC 61.728 60.000 21.89 21.89 38.78 6.53
1640 1678 2.210144 ATCTTTTAGCCAGGCGCCCA 62.210 55.000 26.15 0.00 38.78 5.36
1641 1679 2.361104 TTTTAGCCAGGCGCCCAG 60.361 61.111 26.15 16.71 38.78 4.45
1642 1680 3.936772 TTTTAGCCAGGCGCCCAGG 62.937 63.158 26.77 26.77 38.78 4.45
1657 1696 2.369394 CCCAGGCTTAAAGCTTGTAGG 58.631 52.381 0.00 0.00 45.59 3.18
1658 1697 2.290960 CCCAGGCTTAAAGCTTGTAGGT 60.291 50.000 0.00 0.00 45.59 3.08
1659 1698 3.010420 CCAGGCTTAAAGCTTGTAGGTC 58.990 50.000 0.00 0.00 45.59 3.85
1660 1699 3.307762 CCAGGCTTAAAGCTTGTAGGTCT 60.308 47.826 0.00 0.00 45.59 3.85
1661 1700 3.935828 CAGGCTTAAAGCTTGTAGGTCTC 59.064 47.826 0.00 0.00 42.55 3.36
1666 1708 6.342111 GCTTAAAGCTTGTAGGTCTCTGTAT 58.658 40.000 0.00 0.00 38.45 2.29
1697 1742 8.262227 TGGAGGTCGTCTGTATAATTATTTTGT 58.738 33.333 2.68 0.00 0.00 2.83
1700 1745 9.241317 AGGTCGTCTGTATAATTATTTTGTACG 57.759 33.333 2.68 8.13 0.00 3.67
1701 1746 9.023967 GGTCGTCTGTATAATTATTTTGTACGT 57.976 33.333 2.68 0.00 0.00 3.57
1772 1824 4.367386 TTGCCTTCGTAGCTAGTAGTTC 57.633 45.455 0.00 0.00 0.00 3.01
1923 1975 7.939784 AGAGTTACAATTCCATTTCTTACCC 57.060 36.000 0.00 0.00 0.00 3.69
1925 1977 7.829706 AGAGTTACAATTCCATTTCTTACCCTC 59.170 37.037 0.00 0.00 0.00 4.30
1928 1980 6.780457 ACAATTCCATTTCTTACCCTCATG 57.220 37.500 0.00 0.00 0.00 3.07
1967 2019 9.856803 GCAACAATTACGTTATTTGACAAAAAT 57.143 25.926 4.41 0.00 0.00 1.82
2042 2096 4.962362 TCAATGGTGGTGCTATCTTAGAGA 59.038 41.667 0.00 0.00 0.00 3.10
2067 2121 8.621532 ATGCCACATAGAATAAATATTGACGT 57.378 30.769 0.00 0.00 0.00 4.34
2074 2128 9.658799 CATAGAATAAATATTGACGTGGAGGAT 57.341 33.333 0.00 0.00 0.00 3.24
2243 2299 1.626686 CTCACACACACTCTCTCCCT 58.373 55.000 0.00 0.00 0.00 4.20
2266 2324 2.242196 CCTCTTCCTCACTCTCTCTCCT 59.758 54.545 0.00 0.00 0.00 3.69
2313 2375 5.783360 ACATATCCATCTTATTGGGTACGGA 59.217 40.000 0.00 0.00 35.20 4.69
2371 2433 7.596494 AGTGCATAACAATATGGATTATGTGC 58.404 34.615 12.17 0.00 41.20 4.57
2444 2506 6.305272 TCTGATCATGGGATATTTAGGCTC 57.695 41.667 0.00 0.00 32.67 4.70
2613 2675 1.078143 GGCTAGCACCAAGGGACAG 60.078 63.158 18.24 0.00 0.00 3.51
2614 2676 1.553690 GGCTAGCACCAAGGGACAGA 61.554 60.000 18.24 0.00 0.00 3.41
2640 2702 2.075355 AACCGCCTTCCCATCCAACA 62.075 55.000 0.00 0.00 0.00 3.33
2650 2712 4.437682 TCCCATCCAACATACTGATTCC 57.562 45.455 0.00 0.00 0.00 3.01
2682 2744 2.645838 TTCATCCTAAGCCCATGAGC 57.354 50.000 0.00 0.00 0.00 4.26
2862 2924 1.067142 TCGCTCTTGATTAGTTGCCGT 60.067 47.619 0.00 0.00 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.220767 GGACAGATTAGAAATGACAAGTAAACT 57.779 33.333 0.00 0.00 0.00 2.66
7 8 8.169268 CGGACAGATTAGAAATGACAAGTAAAC 58.831 37.037 0.00 0.00 0.00 2.01
8 9 7.876068 ACGGACAGATTAGAAATGACAAGTAAA 59.124 33.333 0.00 0.00 0.00 2.01
9 10 7.383687 ACGGACAGATTAGAAATGACAAGTAA 58.616 34.615 0.00 0.00 0.00 2.24
10 11 6.931838 ACGGACAGATTAGAAATGACAAGTA 58.068 36.000 0.00 0.00 0.00 2.24
11 12 5.794894 ACGGACAGATTAGAAATGACAAGT 58.205 37.500 0.00 0.00 0.00 3.16
12 13 6.183360 GGAACGGACAGATTAGAAATGACAAG 60.183 42.308 0.00 0.00 0.00 3.16
13 14 5.642063 GGAACGGACAGATTAGAAATGACAA 59.358 40.000 0.00 0.00 0.00 3.18
14 15 5.175859 GGAACGGACAGATTAGAAATGACA 58.824 41.667 0.00 0.00 0.00 3.58
15 16 5.720261 GGAACGGACAGATTAGAAATGAC 57.280 43.478 0.00 0.00 0.00 3.06
33 34 2.093216 CAGGATGCAGCTTCGGAAC 58.907 57.895 0.22 0.00 0.00 3.62
34 35 4.623814 CAGGATGCAGCTTCGGAA 57.376 55.556 0.22 0.00 0.00 4.30
52 53 6.097356 AGAAGAAAATAACACATGCAGCATG 58.903 36.000 30.34 30.34 46.18 4.06
53 54 6.276832 AGAAGAAAATAACACATGCAGCAT 57.723 33.333 0.52 0.52 0.00 3.79
54 55 5.335897 GGAGAAGAAAATAACACATGCAGCA 60.336 40.000 0.00 0.00 0.00 4.41
55 56 5.098211 GGAGAAGAAAATAACACATGCAGC 58.902 41.667 0.00 0.00 0.00 5.25
56 57 5.416952 AGGGAGAAGAAAATAACACATGCAG 59.583 40.000 0.00 0.00 0.00 4.41
57 58 5.324409 AGGGAGAAGAAAATAACACATGCA 58.676 37.500 0.00 0.00 0.00 3.96
58 59 5.447818 CGAGGGAGAAGAAAATAACACATGC 60.448 44.000 0.00 0.00 0.00 4.06
59 60 5.643777 ACGAGGGAGAAGAAAATAACACATG 59.356 40.000 0.00 0.00 0.00 3.21
60 61 5.805728 ACGAGGGAGAAGAAAATAACACAT 58.194 37.500 0.00 0.00 0.00 3.21
61 62 5.221561 TGACGAGGGAGAAGAAAATAACACA 60.222 40.000 0.00 0.00 0.00 3.72
62 63 5.120363 GTGACGAGGGAGAAGAAAATAACAC 59.880 44.000 0.00 0.00 0.00 3.32
63 64 5.235516 GTGACGAGGGAGAAGAAAATAACA 58.764 41.667 0.00 0.00 0.00 2.41
64 65 4.326548 CGTGACGAGGGAGAAGAAAATAAC 59.673 45.833 0.00 0.00 0.00 1.89
65 66 4.021719 ACGTGACGAGGGAGAAGAAAATAA 60.022 41.667 13.70 0.00 0.00 1.40
66 67 3.508793 ACGTGACGAGGGAGAAGAAAATA 59.491 43.478 13.70 0.00 0.00 1.40
67 68 2.299297 ACGTGACGAGGGAGAAGAAAAT 59.701 45.455 13.70 0.00 0.00 1.82
68 69 1.684983 ACGTGACGAGGGAGAAGAAAA 59.315 47.619 13.70 0.00 0.00 2.29
69 70 1.325355 ACGTGACGAGGGAGAAGAAA 58.675 50.000 13.70 0.00 0.00 2.52
70 71 1.000607 CAACGTGACGAGGGAGAAGAA 60.001 52.381 13.70 0.00 0.00 2.52
71 72 0.596577 CAACGTGACGAGGGAGAAGA 59.403 55.000 13.70 0.00 0.00 2.87
72 73 1.009389 GCAACGTGACGAGGGAGAAG 61.009 60.000 13.70 0.00 0.00 2.85
73 74 1.006571 GCAACGTGACGAGGGAGAA 60.007 57.895 13.70 0.00 0.00 2.87
74 75 2.649034 GCAACGTGACGAGGGAGA 59.351 61.111 13.70 0.00 0.00 3.71
75 76 1.592400 TAGGCAACGTGACGAGGGAG 61.592 60.000 13.70 0.00 46.39 4.30
76 77 1.592400 CTAGGCAACGTGACGAGGGA 61.592 60.000 13.70 0.00 46.39 4.20
77 78 1.153823 CTAGGCAACGTGACGAGGG 60.154 63.158 13.70 1.06 46.39 4.30
78 79 0.806868 TACTAGGCAACGTGACGAGG 59.193 55.000 13.70 3.91 46.39 4.63
79 80 1.467734 ACTACTAGGCAACGTGACGAG 59.532 52.381 13.70 4.76 46.39 4.18
80 81 1.527034 ACTACTAGGCAACGTGACGA 58.473 50.000 13.70 0.00 46.39 4.20
81 82 2.417933 ACTACTACTAGGCAACGTGACG 59.582 50.000 2.24 2.24 46.39 4.35
82 83 4.633565 AGTACTACTACTAGGCAACGTGAC 59.366 45.833 0.00 0.00 46.39 3.67
83 84 4.836825 AGTACTACTACTAGGCAACGTGA 58.163 43.478 0.00 0.00 46.39 4.35
84 85 4.260132 CGAGTACTACTACTAGGCAACGTG 60.260 50.000 0.00 0.00 35.72 4.49
85 86 3.868077 CGAGTACTACTACTAGGCAACGT 59.132 47.826 0.00 0.00 35.72 3.99
86 87 3.868077 ACGAGTACTACTACTAGGCAACG 59.132 47.826 0.00 0.00 35.72 4.10
87 88 6.045955 AGTACGAGTACTACTACTAGGCAAC 58.954 44.000 13.64 0.00 43.98 4.17
88 89 6.227298 AGTACGAGTACTACTACTAGGCAA 57.773 41.667 13.64 0.00 43.98 4.52
89 90 5.860941 AGTACGAGTACTACTACTAGGCA 57.139 43.478 13.64 0.00 43.98 4.75
90 91 5.050431 GCAAGTACGAGTACTACTACTAGGC 60.050 48.000 15.33 12.74 44.96 3.93
91 92 5.465056 GGCAAGTACGAGTACTACTACTAGG 59.535 48.000 15.33 8.50 44.96 3.02
92 93 6.200665 CAGGCAAGTACGAGTACTACTACTAG 59.799 46.154 15.33 0.00 44.96 2.57
93 94 6.045318 CAGGCAAGTACGAGTACTACTACTA 58.955 44.000 15.33 0.00 44.96 1.82
94 95 4.874966 CAGGCAAGTACGAGTACTACTACT 59.125 45.833 15.33 9.29 44.96 2.57
95 96 4.034975 CCAGGCAAGTACGAGTACTACTAC 59.965 50.000 15.33 7.50 44.96 2.73
96 97 4.194640 CCAGGCAAGTACGAGTACTACTA 58.805 47.826 15.33 0.00 44.96 1.82
97 98 3.015327 CCAGGCAAGTACGAGTACTACT 58.985 50.000 15.33 11.35 44.96 2.57
98 99 2.479219 GCCAGGCAAGTACGAGTACTAC 60.479 54.545 15.33 10.90 44.96 2.73
99 100 1.747355 GCCAGGCAAGTACGAGTACTA 59.253 52.381 15.33 0.00 44.96 1.82
101 102 0.245539 TGCCAGGCAAGTACGAGTAC 59.754 55.000 13.33 5.32 34.76 2.73
102 103 1.191535 ATGCCAGGCAAGTACGAGTA 58.808 50.000 20.84 0.00 43.62 2.59
103 104 1.137086 CTATGCCAGGCAAGTACGAGT 59.863 52.381 20.84 0.89 43.62 4.18
104 105 1.137086 ACTATGCCAGGCAAGTACGAG 59.863 52.381 20.84 11.24 43.62 4.18
105 106 1.191535 ACTATGCCAGGCAAGTACGA 58.808 50.000 20.84 0.00 43.62 3.43
106 107 2.743938 CTACTATGCCAGGCAAGTACG 58.256 52.381 20.84 15.20 43.62 3.67
107 108 2.103263 AGCTACTATGCCAGGCAAGTAC 59.897 50.000 20.84 18.18 43.62 2.73
108 109 2.398588 AGCTACTATGCCAGGCAAGTA 58.601 47.619 20.84 22.90 43.62 2.24
109 110 1.207791 AGCTACTATGCCAGGCAAGT 58.792 50.000 20.84 23.01 43.62 3.16
110 111 1.945394 CAAGCTACTATGCCAGGCAAG 59.055 52.381 20.84 18.66 43.62 4.01
111 112 2.018644 GCAAGCTACTATGCCAGGCAA 61.019 52.381 20.84 7.19 43.62 4.52
112 113 0.464373 GCAAGCTACTATGCCAGGCA 60.464 55.000 18.99 18.99 44.86 4.75
113 114 0.464373 TGCAAGCTACTATGCCAGGC 60.464 55.000 3.66 3.66 41.87 4.85
114 115 1.945394 CTTGCAAGCTACTATGCCAGG 59.055 52.381 14.65 0.00 41.87 4.45
115 116 2.636830 ACTTGCAAGCTACTATGCCAG 58.363 47.619 26.27 6.65 41.87 4.85
116 117 2.787473 ACTTGCAAGCTACTATGCCA 57.213 45.000 26.27 0.00 41.87 4.92
117 118 3.798202 ACTACTTGCAAGCTACTATGCC 58.202 45.455 26.27 0.00 41.87 4.40
118 119 7.224753 TGAATTACTACTTGCAAGCTACTATGC 59.775 37.037 26.27 13.16 42.86 3.14
119 120 8.543774 GTGAATTACTACTTGCAAGCTACTATG 58.456 37.037 26.27 10.58 0.00 2.23
120 121 8.478877 AGTGAATTACTACTTGCAAGCTACTAT 58.521 33.333 26.27 11.61 38.04 2.12
121 122 7.759886 CAGTGAATTACTACTTGCAAGCTACTA 59.240 37.037 26.27 10.11 37.60 1.82
122 123 6.591834 CAGTGAATTACTACTTGCAAGCTACT 59.408 38.462 26.27 9.43 37.60 2.57
123 124 6.369065 ACAGTGAATTACTACTTGCAAGCTAC 59.631 38.462 26.27 11.27 37.60 3.58
124 125 6.464222 ACAGTGAATTACTACTTGCAAGCTA 58.536 36.000 26.27 15.64 37.60 3.32
125 126 5.308825 ACAGTGAATTACTACTTGCAAGCT 58.691 37.500 26.27 15.35 37.60 3.74
126 127 5.613358 ACAGTGAATTACTACTTGCAAGC 57.387 39.130 26.27 7.87 37.60 4.01
127 128 6.313905 CCCTACAGTGAATTACTACTTGCAAG 59.686 42.308 24.84 24.84 37.60 4.01
128 129 6.170506 CCCTACAGTGAATTACTACTTGCAA 58.829 40.000 0.00 0.00 37.60 4.08
129 130 5.730550 CCCTACAGTGAATTACTACTTGCA 58.269 41.667 0.00 0.00 37.60 4.08
130 131 4.571176 GCCCTACAGTGAATTACTACTTGC 59.429 45.833 0.00 0.00 37.60 4.01
131 132 5.730550 TGCCCTACAGTGAATTACTACTTG 58.269 41.667 0.00 0.00 37.60 3.16
132 133 5.978814 CTGCCCTACAGTGAATTACTACTT 58.021 41.667 0.00 0.00 41.86 2.24
133 134 5.599999 CTGCCCTACAGTGAATTACTACT 57.400 43.478 0.00 0.00 41.86 2.57
146 147 2.105821 AGTAAACAAGTGCTGCCCTACA 59.894 45.455 0.00 0.00 0.00 2.74
147 148 2.742589 GAGTAAACAAGTGCTGCCCTAC 59.257 50.000 0.00 0.00 0.00 3.18
148 149 2.611971 CGAGTAAACAAGTGCTGCCCTA 60.612 50.000 0.00 0.00 0.00 3.53
149 150 1.878102 CGAGTAAACAAGTGCTGCCCT 60.878 52.381 0.00 0.00 0.00 5.19
150 151 0.517316 CGAGTAAACAAGTGCTGCCC 59.483 55.000 0.00 0.00 0.00 5.36
151 152 1.069906 CACGAGTAAACAAGTGCTGCC 60.070 52.381 0.00 0.00 0.00 4.85
152 153 1.864711 TCACGAGTAAACAAGTGCTGC 59.135 47.619 0.00 0.00 34.84 5.25
153 154 2.096713 GCTCACGAGTAAACAAGTGCTG 60.097 50.000 0.00 2.03 34.84 4.41
154 155 2.135933 GCTCACGAGTAAACAAGTGCT 58.864 47.619 0.00 0.00 34.84 4.40
155 156 1.194772 GGCTCACGAGTAAACAAGTGC 59.805 52.381 0.00 0.00 34.84 4.40
156 157 2.476619 CAGGCTCACGAGTAAACAAGTG 59.523 50.000 0.00 2.75 36.06 3.16
157 158 2.755650 CAGGCTCACGAGTAAACAAGT 58.244 47.619 0.00 0.00 0.00 3.16
158 159 1.461127 GCAGGCTCACGAGTAAACAAG 59.539 52.381 0.00 0.00 0.00 3.16
159 160 1.508632 GCAGGCTCACGAGTAAACAA 58.491 50.000 0.00 0.00 0.00 2.83
160 161 0.320421 GGCAGGCTCACGAGTAAACA 60.320 55.000 0.00 0.00 0.00 2.83
161 162 0.320421 TGGCAGGCTCACGAGTAAAC 60.320 55.000 0.00 0.00 0.00 2.01
162 163 0.037326 CTGGCAGGCTCACGAGTAAA 60.037 55.000 6.61 0.00 0.00 2.01
163 164 0.898326 TCTGGCAGGCTCACGAGTAA 60.898 55.000 15.73 0.00 0.00 2.24
164 165 1.304134 TCTGGCAGGCTCACGAGTA 60.304 57.895 15.73 0.00 0.00 2.59
165 166 2.601666 TCTGGCAGGCTCACGAGT 60.602 61.111 15.73 0.00 0.00 4.18
166 167 1.674764 ATCTCTGGCAGGCTCACGAG 61.675 60.000 15.73 2.83 0.00 4.18
167 168 1.260538 AATCTCTGGCAGGCTCACGA 61.261 55.000 15.73 2.67 0.00 4.35
168 169 0.392193 AAATCTCTGGCAGGCTCACG 60.392 55.000 15.73 0.00 0.00 4.35
169 170 1.065564 AGAAATCTCTGGCAGGCTCAC 60.066 52.381 15.73 2.80 0.00 3.51
170 171 1.283347 AGAAATCTCTGGCAGGCTCA 58.717 50.000 15.73 0.00 0.00 4.26
171 172 2.224257 CCTAGAAATCTCTGGCAGGCTC 60.224 54.545 15.73 4.57 32.70 4.70
172 173 1.767681 CCTAGAAATCTCTGGCAGGCT 59.232 52.381 15.73 5.55 32.70 4.58
173 174 1.202746 CCCTAGAAATCTCTGGCAGGC 60.203 57.143 15.73 0.00 32.70 4.85
174 175 2.368221 CTCCCTAGAAATCTCTGGCAGG 59.632 54.545 15.73 5.63 32.70 4.85
175 176 2.224257 GCTCCCTAGAAATCTCTGGCAG 60.224 54.545 8.58 8.58 32.70 4.85
176 177 1.765314 GCTCCCTAGAAATCTCTGGCA 59.235 52.381 0.00 0.00 32.70 4.92
177 178 1.270041 CGCTCCCTAGAAATCTCTGGC 60.270 57.143 0.00 0.00 32.70 4.85
178 179 1.342819 CCGCTCCCTAGAAATCTCTGG 59.657 57.143 0.00 0.00 32.70 3.86
179 180 2.035632 ACCGCTCCCTAGAAATCTCTG 58.964 52.381 0.00 0.00 32.70 3.35
180 181 2.035632 CACCGCTCCCTAGAAATCTCT 58.964 52.381 0.00 0.00 35.52 3.10
181 182 1.539280 GCACCGCTCCCTAGAAATCTC 60.539 57.143 0.00 0.00 0.00 2.75
182 183 0.466124 GCACCGCTCCCTAGAAATCT 59.534 55.000 0.00 0.00 0.00 2.40
183 184 0.533085 GGCACCGCTCCCTAGAAATC 60.533 60.000 0.00 0.00 0.00 2.17
184 185 1.527370 GGCACCGCTCCCTAGAAAT 59.473 57.895 0.00 0.00 0.00 2.17
185 186 2.666098 GGGCACCGCTCCCTAGAAA 61.666 63.158 0.00 0.00 40.86 2.52
186 187 3.081409 GGGCACCGCTCCCTAGAA 61.081 66.667 0.00 0.00 40.86 2.10
198 199 2.213499 CGATTCTTCCATACTGGGCAC 58.787 52.381 0.00 0.00 38.32 5.01
199 200 1.475034 GCGATTCTTCCATACTGGGCA 60.475 52.381 0.00 0.00 38.32 5.36
200 201 1.230324 GCGATTCTTCCATACTGGGC 58.770 55.000 0.00 0.00 38.32 5.36
201 202 1.068588 TCGCGATTCTTCCATACTGGG 59.931 52.381 3.71 0.00 38.32 4.45
202 203 2.398498 CTCGCGATTCTTCCATACTGG 58.602 52.381 10.36 0.00 39.43 4.00
203 204 1.789464 GCTCGCGATTCTTCCATACTG 59.211 52.381 10.36 0.00 0.00 2.74
204 205 1.269831 GGCTCGCGATTCTTCCATACT 60.270 52.381 10.36 0.00 0.00 2.12
205 206 1.140816 GGCTCGCGATTCTTCCATAC 58.859 55.000 10.36 0.00 0.00 2.39
206 207 1.040646 AGGCTCGCGATTCTTCCATA 58.959 50.000 10.36 0.00 0.00 2.74
207 208 0.531532 CAGGCTCGCGATTCTTCCAT 60.532 55.000 10.36 0.00 0.00 3.41
208 209 1.153568 CAGGCTCGCGATTCTTCCA 60.154 57.895 10.36 0.00 0.00 3.53
209 210 2.529619 GCAGGCTCGCGATTCTTCC 61.530 63.158 10.36 6.33 0.00 3.46
210 211 1.156645 ATGCAGGCTCGCGATTCTTC 61.157 55.000 10.36 5.38 33.35 2.87
211 212 1.153289 ATGCAGGCTCGCGATTCTT 60.153 52.632 10.36 0.00 33.35 2.52
212 213 1.886313 CATGCAGGCTCGCGATTCT 60.886 57.895 10.36 7.47 33.35 2.40
213 214 2.630317 CATGCAGGCTCGCGATTC 59.370 61.111 10.36 4.82 33.35 2.52
214 215 3.580193 GCATGCAGGCTCGCGATT 61.580 61.111 17.57 0.00 33.35 3.34
215 216 4.843719 TGCATGCAGGCTCGCGAT 62.844 61.111 25.23 0.00 33.35 4.58
220 221 3.807538 CACCGTGCATGCAGGCTC 61.808 66.667 30.19 19.90 34.04 4.70
221 222 4.648626 ACACCGTGCATGCAGGCT 62.649 61.111 30.19 17.54 34.04 4.58
222 223 4.107051 GACACCGTGCATGCAGGC 62.107 66.667 30.19 18.05 0.00 4.85
223 224 2.669229 TGACACCGTGCATGCAGG 60.669 61.111 28.99 28.99 0.00 4.85
224 225 2.683859 CCTGACACCGTGCATGCAG 61.684 63.158 23.41 13.42 0.00 4.41
225 226 2.669229 CCTGACACCGTGCATGCA 60.669 61.111 18.46 18.46 0.00 3.96
226 227 2.260869 AACCTGACACCGTGCATGC 61.261 57.895 11.82 11.82 0.00 4.06
227 228 1.575922 CAACCTGACACCGTGCATG 59.424 57.895 0.00 0.00 0.00 4.06
228 229 1.600636 CCAACCTGACACCGTGCAT 60.601 57.895 0.00 0.00 0.00 3.96
229 230 2.203139 CCAACCTGACACCGTGCA 60.203 61.111 0.00 0.00 0.00 4.57
230 231 3.660111 GCCAACCTGACACCGTGC 61.660 66.667 0.00 0.00 0.00 5.34
231 232 2.203139 TGCCAACCTGACACCGTG 60.203 61.111 0.00 0.00 0.00 4.94
232 233 2.111043 CTGCCAACCTGACACCGT 59.889 61.111 0.00 0.00 0.00 4.83
233 234 3.357079 GCTGCCAACCTGACACCG 61.357 66.667 0.00 0.00 0.00 4.94
234 235 2.203337 TGCTGCCAACCTGACACC 60.203 61.111 0.00 0.00 0.00 4.16
235 236 1.383456 TTGTGCTGCCAACCTGACAC 61.383 55.000 0.00 0.00 0.00 3.67
236 237 1.077140 TTGTGCTGCCAACCTGACA 60.077 52.632 0.00 0.00 0.00 3.58
237 238 1.656441 CTTGTGCTGCCAACCTGAC 59.344 57.895 0.00 0.00 0.00 3.51
238 239 1.529010 CCTTGTGCTGCCAACCTGA 60.529 57.895 0.00 0.00 0.00 3.86
239 240 0.896940 ATCCTTGTGCTGCCAACCTG 60.897 55.000 0.00 0.00 0.00 4.00
240 241 0.896940 CATCCTTGTGCTGCCAACCT 60.897 55.000 0.00 0.00 0.00 3.50
241 242 1.588082 CATCCTTGTGCTGCCAACC 59.412 57.895 0.00 0.00 0.00 3.77
242 243 1.181098 ACCATCCTTGTGCTGCCAAC 61.181 55.000 0.00 0.00 0.00 3.77
243 244 0.895100 GACCATCCTTGTGCTGCCAA 60.895 55.000 0.00 0.15 0.00 4.52
244 245 1.303561 GACCATCCTTGTGCTGCCA 60.304 57.895 0.00 0.00 0.00 4.92
245 246 1.303561 TGACCATCCTTGTGCTGCC 60.304 57.895 0.00 0.00 0.00 4.85
246 247 1.589716 GGTGACCATCCTTGTGCTGC 61.590 60.000 0.00 0.00 0.00 5.25
247 248 2.559785 GGTGACCATCCTTGTGCTG 58.440 57.895 0.00 0.00 0.00 4.41
260 261 2.818274 GGATTCGCCGTGGGTGAC 60.818 66.667 0.00 0.00 42.31 3.67
261 262 4.090588 GGGATTCGCCGTGGGTGA 62.091 66.667 0.00 0.00 40.77 4.02
262 263 4.096003 AGGGATTCGCCGTGGGTG 62.096 66.667 0.00 0.00 37.63 4.61
263 264 4.096003 CAGGGATTCGCCGTGGGT 62.096 66.667 0.00 0.00 46.38 4.51
267 268 2.514592 CATGCAGGGATTCGCCGT 60.515 61.111 0.00 0.00 37.63 5.68
268 269 3.282157 CCATGCAGGGATTCGCCG 61.282 66.667 13.35 0.00 37.63 6.46
269 270 2.124151 ACCATGCAGGGATTCGCC 60.124 61.111 26.87 0.00 43.89 5.54
270 271 2.484062 CCACCATGCAGGGATTCGC 61.484 63.158 26.87 0.00 43.89 4.70
271 272 1.097547 GTCCACCATGCAGGGATTCG 61.098 60.000 26.87 9.07 43.89 3.34
272 273 0.753111 GGTCCACCATGCAGGGATTC 60.753 60.000 26.87 10.86 43.89 2.52
273 274 1.307647 GGTCCACCATGCAGGGATT 59.692 57.895 26.87 0.00 43.89 3.01
274 275 3.010144 GGTCCACCATGCAGGGAT 58.990 61.111 26.87 5.43 43.89 3.85
275 276 3.716195 CGGTCCACCATGCAGGGA 61.716 66.667 26.87 9.85 43.89 4.20
276 277 3.567579 AACGGTCCACCATGCAGGG 62.568 63.158 17.55 17.55 43.89 4.45
277 278 2.034066 AACGGTCCACCATGCAGG 59.966 61.111 0.00 0.00 45.67 4.85
278 279 2.334946 CCAACGGTCCACCATGCAG 61.335 63.158 0.00 0.00 35.14 4.41
279 280 2.135903 ATCCAACGGTCCACCATGCA 62.136 55.000 0.00 0.00 35.14 3.96
280 281 0.965363 AATCCAACGGTCCACCATGC 60.965 55.000 0.00 0.00 35.14 4.06
281 282 2.288666 CTAATCCAACGGTCCACCATG 58.711 52.381 0.00 0.00 35.14 3.66
282 283 1.408266 GCTAATCCAACGGTCCACCAT 60.408 52.381 0.00 0.00 35.14 3.55
283 284 0.035820 GCTAATCCAACGGTCCACCA 60.036 55.000 0.00 0.00 35.14 4.17
284 285 0.746923 GGCTAATCCAACGGTCCACC 60.747 60.000 0.00 0.00 34.01 4.61
285 286 0.746923 GGGCTAATCCAACGGTCCAC 60.747 60.000 0.00 0.00 36.21 4.02
286 287 1.202099 TGGGCTAATCCAACGGTCCA 61.202 55.000 0.00 0.00 36.21 4.02
287 288 0.182775 ATGGGCTAATCCAACGGTCC 59.817 55.000 0.00 0.00 40.62 4.46
288 289 1.134220 TGATGGGCTAATCCAACGGTC 60.134 52.381 0.00 0.00 40.62 4.79
289 290 0.916086 TGATGGGCTAATCCAACGGT 59.084 50.000 0.00 0.00 40.62 4.83
290 291 2.276732 ATGATGGGCTAATCCAACGG 57.723 50.000 0.00 0.00 40.62 4.44
291 292 2.736721 CGTATGATGGGCTAATCCAACG 59.263 50.000 0.00 9.00 40.62 4.10
292 293 3.074412 CCGTATGATGGGCTAATCCAAC 58.926 50.000 0.00 0.00 40.62 3.77
293 294 2.708861 ACCGTATGATGGGCTAATCCAA 59.291 45.455 0.00 0.00 40.62 3.53
294 295 2.301870 GACCGTATGATGGGCTAATCCA 59.698 50.000 0.00 0.00 41.60 3.41
295 296 2.567615 AGACCGTATGATGGGCTAATCC 59.432 50.000 0.00 0.00 42.06 3.01
296 297 3.006967 ACAGACCGTATGATGGGCTAATC 59.993 47.826 0.00 0.00 41.92 1.75
297 298 2.972713 ACAGACCGTATGATGGGCTAAT 59.027 45.455 0.00 0.00 41.92 1.73
298 299 2.394632 ACAGACCGTATGATGGGCTAA 58.605 47.619 0.00 0.00 41.92 3.09
299 300 2.082140 ACAGACCGTATGATGGGCTA 57.918 50.000 0.00 0.00 41.92 3.93
300 301 2.082140 TACAGACCGTATGATGGGCT 57.918 50.000 0.00 0.00 45.75 5.19
316 317 1.153449 GGCTACGTGGCTGCATACA 60.153 57.895 23.68 0.00 38.32 2.29
317 318 1.887707 GGGCTACGTGGCTGCATAC 60.888 63.158 23.68 5.44 41.48 2.39
318 319 2.028125 GAGGGCTACGTGGCTGCATA 62.028 60.000 23.68 0.00 41.48 3.14
319 320 3.391665 GAGGGCTACGTGGCTGCAT 62.392 63.158 23.68 5.37 41.48 3.96
320 321 4.082523 GAGGGCTACGTGGCTGCA 62.083 66.667 23.68 0.00 41.48 4.41
321 322 3.724914 GAGAGGGCTACGTGGCTGC 62.725 68.421 23.68 12.68 41.48 5.25
322 323 2.010582 GAGAGAGGGCTACGTGGCTG 62.011 65.000 23.68 0.00 41.48 4.85
323 324 1.755008 GAGAGAGGGCTACGTGGCT 60.755 63.158 23.68 4.37 41.48 4.75
324 325 2.787567 GGAGAGAGGGCTACGTGGC 61.788 68.421 16.51 16.51 40.96 5.01
325 326 0.970937 TTGGAGAGAGGGCTACGTGG 60.971 60.000 0.00 0.00 0.00 4.94
326 327 0.895530 TTTGGAGAGAGGGCTACGTG 59.104 55.000 0.00 0.00 0.00 4.49
327 328 1.275573 GTTTTGGAGAGAGGGCTACGT 59.724 52.381 0.00 0.00 0.00 3.57
328 329 1.275291 TGTTTTGGAGAGAGGGCTACG 59.725 52.381 0.00 0.00 0.00 3.51
329 330 3.418684 TTGTTTTGGAGAGAGGGCTAC 57.581 47.619 0.00 0.00 0.00 3.58
330 331 3.369471 CGATTGTTTTGGAGAGAGGGCTA 60.369 47.826 0.00 0.00 0.00 3.93
331 332 2.616510 CGATTGTTTTGGAGAGAGGGCT 60.617 50.000 0.00 0.00 0.00 5.19
332 333 1.740025 CGATTGTTTTGGAGAGAGGGC 59.260 52.381 0.00 0.00 0.00 5.19
333 334 3.334583 TCGATTGTTTTGGAGAGAGGG 57.665 47.619 0.00 0.00 0.00 4.30
334 335 6.763135 TCATATTCGATTGTTTTGGAGAGAGG 59.237 38.462 0.00 0.00 0.00 3.69
335 336 7.776933 TCATATTCGATTGTTTTGGAGAGAG 57.223 36.000 0.00 0.00 0.00 3.20
336 337 7.065803 GGTTCATATTCGATTGTTTTGGAGAGA 59.934 37.037 0.00 0.00 0.00 3.10
337 338 7.189512 GGTTCATATTCGATTGTTTTGGAGAG 58.810 38.462 0.00 0.00 0.00 3.20
338 339 6.183360 CGGTTCATATTCGATTGTTTTGGAGA 60.183 38.462 0.00 0.00 0.00 3.71
339 340 5.965334 CGGTTCATATTCGATTGTTTTGGAG 59.035 40.000 0.00 0.00 0.00 3.86
340 341 5.413213 ACGGTTCATATTCGATTGTTTTGGA 59.587 36.000 0.00 0.00 0.00 3.53
341 342 5.636837 ACGGTTCATATTCGATTGTTTTGG 58.363 37.500 0.00 0.00 0.00 3.28
342 343 6.033407 CCAACGGTTCATATTCGATTGTTTTG 59.967 38.462 0.00 0.00 0.00 2.44
343 344 6.072397 TCCAACGGTTCATATTCGATTGTTTT 60.072 34.615 0.00 0.00 0.00 2.43
344 345 5.413213 TCCAACGGTTCATATTCGATTGTTT 59.587 36.000 0.00 0.00 0.00 2.83
345 346 4.938832 TCCAACGGTTCATATTCGATTGTT 59.061 37.500 0.00 0.00 0.00 2.83
346 347 4.509616 TCCAACGGTTCATATTCGATTGT 58.490 39.130 0.00 0.00 0.00 2.71
347 348 5.673337 ATCCAACGGTTCATATTCGATTG 57.327 39.130 0.00 0.00 0.00 2.67
348 349 6.764085 TGTAATCCAACGGTTCATATTCGATT 59.236 34.615 0.00 0.00 0.00 3.34
349 350 6.285224 TGTAATCCAACGGTTCATATTCGAT 58.715 36.000 0.00 0.00 0.00 3.59
350 351 5.662456 TGTAATCCAACGGTTCATATTCGA 58.338 37.500 0.00 0.00 0.00 3.71
351 352 5.977171 TGTAATCCAACGGTTCATATTCG 57.023 39.130 0.00 0.00 0.00 3.34
352 353 7.981142 TCTTTGTAATCCAACGGTTCATATTC 58.019 34.615 0.00 0.00 31.20 1.75
353 354 7.931578 TCTTTGTAATCCAACGGTTCATATT 57.068 32.000 0.00 0.00 31.20 1.28
354 355 8.519799 AATCTTTGTAATCCAACGGTTCATAT 57.480 30.769 0.00 0.00 31.20 1.78
355 356 7.608376 TGAATCTTTGTAATCCAACGGTTCATA 59.392 33.333 3.89 0.00 43.52 2.15
356 357 6.432783 TGAATCTTTGTAATCCAACGGTTCAT 59.567 34.615 3.89 0.00 43.52 2.57
357 358 5.765677 TGAATCTTTGTAATCCAACGGTTCA 59.234 36.000 3.89 3.89 45.12 3.18
358 359 6.249035 TGAATCTTTGTAATCCAACGGTTC 57.751 37.500 0.00 0.00 40.84 3.62
359 360 6.642707 TTGAATCTTTGTAATCCAACGGTT 57.357 33.333 0.00 0.00 29.03 4.44
360 361 6.350110 CCATTGAATCTTTGTAATCCAACGGT 60.350 38.462 0.00 0.00 31.20 4.83
361 362 6.035843 CCATTGAATCTTTGTAATCCAACGG 58.964 40.000 0.00 0.00 31.20 4.44
362 363 6.620678 ACCATTGAATCTTTGTAATCCAACG 58.379 36.000 0.00 0.00 31.20 4.10
363 364 7.035612 GGACCATTGAATCTTTGTAATCCAAC 58.964 38.462 0.00 0.00 31.20 3.77
364 365 6.723515 TGGACCATTGAATCTTTGTAATCCAA 59.276 34.615 0.00 0.00 0.00 3.53
365 366 6.252233 TGGACCATTGAATCTTTGTAATCCA 58.748 36.000 0.00 0.00 0.00 3.41
366 367 6.773976 TGGACCATTGAATCTTTGTAATCC 57.226 37.500 0.00 0.00 0.00 3.01
369 370 9.349713 GGTATATGGACCATTGAATCTTTGTAA 57.650 33.333 13.40 0.00 39.51 2.41
370 371 8.723365 AGGTATATGGACCATTGAATCTTTGTA 58.277 33.333 13.40 0.00 42.47 2.41
371 372 7.586349 AGGTATATGGACCATTGAATCTTTGT 58.414 34.615 13.40 0.00 42.47 2.83
372 373 8.355169 CAAGGTATATGGACCATTGAATCTTTG 58.645 37.037 13.40 8.34 42.47 2.77
373 374 8.281531 TCAAGGTATATGGACCATTGAATCTTT 58.718 33.333 13.40 0.17 42.47 2.52
374 375 7.815383 TCAAGGTATATGGACCATTGAATCTT 58.185 34.615 13.40 7.59 42.47 2.40
375 376 7.392766 TCAAGGTATATGGACCATTGAATCT 57.607 36.000 13.40 1.36 42.47 2.40
376 377 9.911788 ATATCAAGGTATATGGACCATTGAATC 57.088 33.333 13.40 0.00 42.47 2.52
378 379 9.739276 GAATATCAAGGTATATGGACCATTGAA 57.261 33.333 13.40 0.00 42.47 2.69
379 380 8.040727 CGAATATCAAGGTATATGGACCATTGA 58.959 37.037 13.40 10.26 42.47 2.57
380 381 7.824289 ACGAATATCAAGGTATATGGACCATTG 59.176 37.037 13.40 4.54 42.47 2.82
381 382 7.918076 ACGAATATCAAGGTATATGGACCATT 58.082 34.615 13.40 3.45 42.47 3.16
382 383 7.496346 ACGAATATCAAGGTATATGGACCAT 57.504 36.000 12.67 12.67 42.47 3.55
383 384 6.928348 ACGAATATCAAGGTATATGGACCA 57.072 37.500 0.00 0.00 42.47 4.02
384 385 9.962783 GTATACGAATATCAAGGTATATGGACC 57.037 37.037 0.00 0.00 40.08 4.46
435 436 8.687242 CGGATGTATCTACCATCAATATAGTGT 58.313 37.037 0.00 0.00 0.00 3.55
436 437 8.687242 ACGGATGTATCTACCATCAATATAGTG 58.313 37.037 0.00 0.00 0.00 2.74
437 438 8.824756 ACGGATGTATCTACCATCAATATAGT 57.175 34.615 0.00 0.00 0.00 2.12
439 440 9.869757 CAAACGGATGTATCTACCATCAATATA 57.130 33.333 0.00 0.00 0.00 0.86
440 441 8.593679 TCAAACGGATGTATCTACCATCAATAT 58.406 33.333 0.00 0.00 0.00 1.28
441 442 7.958088 TCAAACGGATGTATCTACCATCAATA 58.042 34.615 0.00 0.00 0.00 1.90
442 443 6.826668 TCAAACGGATGTATCTACCATCAAT 58.173 36.000 0.00 0.00 0.00 2.57
443 444 6.228616 TCAAACGGATGTATCTACCATCAA 57.771 37.500 0.00 0.00 0.00 2.57
444 445 5.221441 CCTCAAACGGATGTATCTACCATCA 60.221 44.000 0.00 0.00 0.00 3.07
445 446 5.010719 TCCTCAAACGGATGTATCTACCATC 59.989 44.000 0.00 0.00 0.00 3.51
446 447 4.899457 TCCTCAAACGGATGTATCTACCAT 59.101 41.667 0.00 0.00 0.00 3.55
447 448 4.098960 GTCCTCAAACGGATGTATCTACCA 59.901 45.833 0.00 0.00 35.11 3.25
448 449 4.098960 TGTCCTCAAACGGATGTATCTACC 59.901 45.833 0.00 0.00 35.11 3.18
449 450 5.258456 TGTCCTCAAACGGATGTATCTAC 57.742 43.478 0.00 0.00 35.11 2.59
450 451 5.925506 TTGTCCTCAAACGGATGTATCTA 57.074 39.130 0.00 0.00 35.11 1.98
451 452 4.819105 TTGTCCTCAAACGGATGTATCT 57.181 40.909 0.00 0.00 35.11 1.98
552 554 1.628846 TCCTTTTGAGCTGGGTACTCC 59.371 52.381 0.00 0.00 32.98 3.85
637 641 2.909965 GGGTTGGAGTTTGGCGCA 60.910 61.111 10.83 0.00 0.00 6.09
662 666 1.592131 CCGTCCGTCGTTGTCCAAA 60.592 57.895 0.00 0.00 37.94 3.28
664 668 4.651008 GCCGTCCGTCGTTGTCCA 62.651 66.667 0.00 0.00 37.94 4.02
683 687 4.050934 CTTTCGGCAAACGGGGGC 62.051 66.667 0.00 0.00 44.45 5.80
703 707 0.308376 GTTTTGGCTTCCGTTGCGTA 59.692 50.000 0.00 0.00 0.00 4.42
711 715 2.306847 TCTCTGTTGGTTTTGGCTTCC 58.693 47.619 0.00 0.00 0.00 3.46
863 867 2.247358 GGATCTGGAGTCTCTGGATCC 58.753 57.143 24.64 24.64 43.37 3.36
872 876 1.611491 GACCGAGATGGATCTGGAGTC 59.389 57.143 10.37 7.73 42.00 3.36
873 877 1.063642 TGACCGAGATGGATCTGGAGT 60.064 52.381 10.37 3.55 42.00 3.85
875 879 1.403814 GTGACCGAGATGGATCTGGA 58.596 55.000 10.37 0.00 42.00 3.86
876 880 0.390860 GGTGACCGAGATGGATCTGG 59.609 60.000 0.00 0.00 42.00 3.86
877 881 0.390860 GGGTGACCGAGATGGATCTG 59.609 60.000 0.00 0.00 43.64 2.90
970 974 0.608640 CGGGGAGGACATATAGGTGC 59.391 60.000 0.20 0.20 0.00 5.01
990 994 2.947785 AGGAGGAGGTCGGGGTCT 60.948 66.667 0.00 0.00 0.00 3.85
991 995 2.442458 GAGGAGGAGGTCGGGGTC 60.442 72.222 0.00 0.00 0.00 4.46
992 996 4.077180 GGAGGAGGAGGTCGGGGT 62.077 72.222 0.00 0.00 0.00 4.95
993 997 3.742248 GAGGAGGAGGAGGTCGGGG 62.742 73.684 0.00 0.00 0.00 5.73
994 998 2.123640 GAGGAGGAGGAGGTCGGG 60.124 72.222 0.00 0.00 0.00 5.14
995 999 2.123640 GGAGGAGGAGGAGGTCGG 60.124 72.222 0.00 0.00 0.00 4.79
996 1000 0.397816 AATGGAGGAGGAGGAGGTCG 60.398 60.000 0.00 0.00 0.00 4.79
997 1001 1.343478 TGAATGGAGGAGGAGGAGGTC 60.343 57.143 0.00 0.00 0.00 3.85
998 1002 0.719015 TGAATGGAGGAGGAGGAGGT 59.281 55.000 0.00 0.00 0.00 3.85
1095 1109 2.035704 CCTGACCTGAAGATGGATCGAG 59.964 54.545 0.00 0.00 0.00 4.04
1101 1115 1.209019 CCTCACCTGACCTGAAGATGG 59.791 57.143 0.00 0.00 0.00 3.51
1603 1617 1.317431 ATGGCTACGTACGAGCACCA 61.317 55.000 28.30 24.44 41.98 4.17
1636 1674 1.745653 CTACAAGCTTTAAGCCTGGGC 59.254 52.381 18.27 3.00 43.77 5.36
1637 1675 2.290960 ACCTACAAGCTTTAAGCCTGGG 60.291 50.000 18.27 13.12 43.77 4.45
1638 1676 3.010420 GACCTACAAGCTTTAAGCCTGG 58.990 50.000 18.27 13.05 43.77 4.45
1640 1678 3.841255 AGAGACCTACAAGCTTTAAGCCT 59.159 43.478 13.84 0.00 43.77 4.58
1641 1679 3.935828 CAGAGACCTACAAGCTTTAAGCC 59.064 47.826 13.84 0.00 43.77 4.35
1642 1680 4.570930 ACAGAGACCTACAAGCTTTAAGC 58.429 43.478 9.18 9.18 42.84 3.09
1644 1682 9.569122 AAAAATACAGAGACCTACAAGCTTTAA 57.431 29.630 0.00 0.00 0.00 1.52
1697 1742 5.175127 TGTGGATTCAGTACTACGTACGTA 58.825 41.667 25.41 25.41 43.05 3.57
1700 1745 6.307318 CACTTTGTGGATTCAGTACTACGTAC 59.693 42.308 0.00 0.00 39.10 3.67
1701 1746 6.207221 TCACTTTGTGGATTCAGTACTACGTA 59.793 38.462 0.00 0.00 33.87 3.57
1706 1751 7.285401 ACAATTTCACTTTGTGGATTCAGTACT 59.715 33.333 0.00 0.00 36.02 2.73
1757 1809 2.353889 CCAAGCGAACTACTAGCTACGA 59.646 50.000 3.61 0.00 40.78 3.43
1772 1824 3.386486 TCACAAACTACTGTACCAAGCG 58.614 45.455 0.00 0.00 0.00 4.68
1923 1975 3.617540 TGCCACAAACGTTAACATGAG 57.382 42.857 0.00 0.00 0.00 2.90
1925 1977 3.439293 TGTTGCCACAAACGTTAACATG 58.561 40.909 0.00 0.00 32.47 3.21
1928 1980 5.330939 CGTAATTGTTGCCACAAACGTTAAC 60.331 40.000 15.85 1.45 46.17 2.01
2042 2096 8.506437 CACGTCAATATTTATTCTATGTGGCAT 58.494 33.333 0.00 0.00 29.99 4.40
2060 2114 3.981071 TTCTCAATCCTCCACGTCAAT 57.019 42.857 0.00 0.00 0.00 2.57
2065 2119 8.662781 TTCTTATAATTTCTCAATCCTCCACG 57.337 34.615 0.00 0.00 0.00 4.94
2125 2179 4.553323 GGCGTTCTTCTAGTTGTGTTAGA 58.447 43.478 0.00 0.00 0.00 2.10
2126 2180 3.678548 GGGCGTTCTTCTAGTTGTGTTAG 59.321 47.826 0.00 0.00 0.00 2.34
2156 2210 2.621556 AGTTAATGTGGCCCCATTGT 57.378 45.000 22.16 5.24 35.85 2.71
2160 2214 4.202631 ACTCTTAAAGTTAATGTGGCCCCA 60.203 41.667 0.00 0.00 33.03 4.96
2214 2268 4.040829 AGAGTGTGTGTGAGGATTTGATGA 59.959 41.667 0.00 0.00 0.00 2.92
2243 2299 3.308832 GGAGAGAGAGTGAGGAAGAGGAA 60.309 52.174 0.00 0.00 0.00 3.36
2266 2324 2.920271 TGTGTTAGAGAGAGGGAGAGGA 59.080 50.000 0.00 0.00 0.00 3.71
2313 2375 9.241919 TGTGTGTGAAATAGATGAATTATGGTT 57.758 29.630 0.00 0.00 0.00 3.67
2371 2433 7.255590 CCCTTAGTTCTGGTGGCAAATATAATG 60.256 40.741 0.00 0.00 0.00 1.90
2426 2488 2.353704 CGCGAGCCTAAATATCCCATGA 60.354 50.000 0.00 0.00 0.00 3.07
2444 2506 5.095691 AGCTTTGATTTTCCATATACGCG 57.904 39.130 3.53 3.53 0.00 6.01
2640 2702 1.595382 GCGCCAGCGGAATCAGTAT 60.595 57.895 14.63 0.00 40.19 2.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.