Multiple sequence alignment - TraesCS6B01G055400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G055400 chr6B 100.000 5039 0 0 1 5039 35724485 35719447 0.000000e+00 9306.0
1 TraesCS6B01G055400 chr6B 77.815 302 54 9 1672 1971 6338220 6338510 1.860000e-39 174.0
2 TraesCS6B01G055400 chr6B 80.995 221 38 4 2057 2274 2308162 2307943 6.710000e-39 172.0
3 TraesCS6B01G055400 chr6B 80.184 217 34 7 2057 2268 5791842 5792054 2.430000e-33 154.0
4 TraesCS6B01G055400 chr6B 81.250 192 29 5 2057 2243 2073659 2073848 1.130000e-31 148.0
5 TraesCS6B01G055400 chr6A 95.611 2438 78 16 2307 4736 3327864 3325448 0.000000e+00 3882.0
6 TraesCS6B01G055400 chr6A 96.531 1499 41 4 790 2277 3329358 3327860 0.000000e+00 2470.0
7 TraesCS6B01G055400 chr6A 84.480 1308 172 22 2831 4120 1335853 1334559 0.000000e+00 1262.0
8 TraesCS6B01G055400 chr6A 93.023 258 12 3 4786 5037 3323066 3322809 6.160000e-99 372.0
9 TraesCS6B01G055400 chr6A 86.102 295 37 3 25 315 3329766 3329472 1.050000e-81 315.0
10 TraesCS6B01G055400 chr6A 88.976 127 5 4 436 553 3329479 3329353 1.130000e-31 148.0
11 TraesCS6B01G055400 chr6A 81.319 91 9 3 1122 1210 1339387 1339303 3.260000e-07 67.6
12 TraesCS6B01G055400 chr4D 88.861 1203 121 10 2867 4063 19753361 19752166 0.000000e+00 1467.0
13 TraesCS6B01G055400 chr4D 88.778 1203 122 10 2867 4063 19783300 19784495 0.000000e+00 1461.0
14 TraesCS6B01G055400 chr4D 81.567 217 31 8 2057 2268 19753923 19753711 2.410000e-38 171.0
15 TraesCS6B01G055400 chr4D 81.567 217 31 8 2057 2268 19782738 19782950 2.410000e-38 171.0
16 TraesCS6B01G055400 chrUn 88.655 1190 119 12 2888 4065 252682670 252681485 0.000000e+00 1435.0
17 TraesCS6B01G055400 chrUn 88.655 1190 119 12 2888 4065 260288746 260289931 0.000000e+00 1435.0
18 TraesCS6B01G055400 chrUn 79.402 301 53 7 1674 1971 252683603 252683309 2.380000e-48 204.0
19 TraesCS6B01G055400 chrUn 79.402 301 53 7 1674 1971 260287813 260288107 2.380000e-48 204.0
20 TraesCS6B01G055400 chr6D 88.270 1202 130 8 2867 4063 604160 602965 0.000000e+00 1428.0
21 TraesCS6B01G055400 chr6D 80.465 215 33 7 2059 2268 1490241 1490451 6.750000e-34 156.0
22 TraesCS6B01G055400 chr6D 81.443 194 27 6 2078 2264 1428600 1428409 3.140000e-32 150.0
23 TraesCS6B01G055400 chr4A 87.011 1201 146 10 2858 4050 744537240 744536042 0.000000e+00 1345.0
24 TraesCS6B01G055400 chr1B 85.773 1209 160 12 2885 4086 567726716 567725513 0.000000e+00 1269.0
25 TraesCS6B01G055400 chr1B 78.146 302 53 9 1672 1971 29923783 29924073 4.010000e-41 180.0
26 TraesCS6B01G055400 chr1B 84.270 89 8 2 1122 1210 635977029 635977111 1.160000e-11 82.4
27 TraesCS6B01G055400 chr1B 71.523 302 70 8 1674 1973 22824279 22823992 3.260000e-07 67.6
28 TraesCS6B01G055400 chr7A 84.343 198 26 3 2081 2274 345860 345664 6.660000e-44 189.0
29 TraesCS6B01G055400 chr3B 81.951 205 27 6 2596 2790 257099202 257098998 1.120000e-36 165.0
30 TraesCS6B01G055400 chr3D 80.976 205 29 6 2596 2790 178652072 178651868 2.430000e-33 154.0
31 TraesCS6B01G055400 chr3A 80.976 205 29 6 2596 2790 221275236 221275032 2.430000e-33 154.0
32 TraesCS6B01G055400 chr5D 82.609 138 23 1 37 173 104601232 104601095 2.460000e-23 121.0
33 TraesCS6B01G055400 chr7B 82.353 85 14 1 74 157 12965964 12965880 7.000000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G055400 chr6B 35719447 35724485 5038 True 9306.0 9306 100.0000 1 5039 1 chr6B.!!$R2 5038
1 TraesCS6B01G055400 chr6A 3322809 3329766 6957 True 1437.4 3882 92.0486 25 5037 5 chr6A.!!$R2 5012
2 TraesCS6B01G055400 chr6A 1334559 1339387 4828 True 664.8 1262 82.8995 1122 4120 2 chr6A.!!$R1 2998
3 TraesCS6B01G055400 chr4D 19752166 19753923 1757 True 819.0 1467 85.2140 2057 4063 2 chr4D.!!$R1 2006
4 TraesCS6B01G055400 chr4D 19782738 19784495 1757 False 816.0 1461 85.1725 2057 4063 2 chr4D.!!$F1 2006
5 TraesCS6B01G055400 chrUn 252681485 252683603 2118 True 819.5 1435 84.0285 1674 4065 2 chrUn.!!$R1 2391
6 TraesCS6B01G055400 chrUn 260287813 260289931 2118 False 819.5 1435 84.0285 1674 4065 2 chrUn.!!$F1 2391
7 TraesCS6B01G055400 chr6D 602965 604160 1195 True 1428.0 1428 88.2700 2867 4063 1 chr6D.!!$R1 1196
8 TraesCS6B01G055400 chr4A 744536042 744537240 1198 True 1345.0 1345 87.0110 2858 4050 1 chr4A.!!$R1 1192
9 TraesCS6B01G055400 chr1B 567725513 567726716 1203 True 1269.0 1269 85.7730 2885 4086 1 chr1B.!!$R2 1201

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
299 304 0.102300 AAAGCAACCAAAGTGCCGAC 59.898 50.000 0.00 0.00 0.00 4.79 F
332 337 0.105964 GGTCATGGTGCGGCATAGTA 59.894 55.000 5.72 0.00 0.00 1.82 F
368 373 0.105964 GGTCATGGTGCGGCATAGTA 59.894 55.000 5.72 0.00 0.00 1.82 F
636 650 0.108138 GCGTCAGGAGTGGTGCTATT 60.108 55.000 0.00 0.00 0.00 1.73 F
730 744 0.178068 AGACACAACTGCCACTCGTT 59.822 50.000 0.00 0.00 0.00 3.85 F
731 745 0.304705 GACACAACTGCCACTCGTTG 59.695 55.000 0.00 0.00 44.48 4.10 F
1338 1393 1.067821 AGCTTATCAGTCGCTACAGGC 59.932 52.381 0.00 0.00 37.64 4.85 F
1381 1436 1.070134 TCTCCTACCACTGCAACACAC 59.930 52.381 0.00 0.00 0.00 3.82 F
1420 1475 2.151202 CCATGGCACCGTATATGGAAC 58.849 52.381 18.22 8.51 42.05 3.62 F
1871 1955 2.266627 GCCTCAGCAGCAACAGCTT 61.267 57.895 0.00 0.00 41.14 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1132 1149 0.106894 GGGAAGGGGATGTCGATGTC 59.893 60.000 0.00 0.0 0.00 3.06 R
1899 1983 0.254178 ACTTGCAGATGTAGCCAGGG 59.746 55.000 0.00 0.0 0.00 4.45 R
2106 2215 0.749049 GCATGGATTTTGGAGGAGGC 59.251 55.000 0.00 0.0 0.00 4.70 R
2279 2401 1.151221 TGGCAACAGCAGGACACAT 59.849 52.632 0.00 0.0 46.17 3.21 R
2280 2402 2.594536 TGGCAACAGCAGGACACA 59.405 55.556 0.00 0.0 46.17 3.72 R
2599 4909 8.523658 AGAACTTAATTATTTTGGAACAGAGGC 58.476 33.333 0.00 0.0 42.39 4.70 R
2821 5133 3.297736 AGGAAAGTATGTACTCCCTCCG 58.702 50.000 7.75 0.0 35.90 4.63 R
3225 5600 6.317391 CACCAAAGCAACCTTTTCCAATTAAA 59.683 34.615 0.00 0.0 39.20 1.52 R
3669 6044 3.503363 TGATTGATGCAGTGTGTTCCTTC 59.497 43.478 0.00 0.0 0.00 3.46 R
4112 6488 1.440938 CGGCCACCTTCAAAACACGA 61.441 55.000 2.24 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
138 139 8.036273 TCGTCCTTCTTTAATTTTATGTCACC 57.964 34.615 0.00 0.00 0.00 4.02
176 177 5.114785 AGTCGACATGCATGATACTAGTC 57.885 43.478 32.75 16.27 0.00 2.59
222 223 6.374613 AGGCTTAGAAATACAGTTGTTTAGCC 59.625 38.462 0.00 0.00 42.66 3.93
228 229 6.546034 AGAAATACAGTTGTTTAGCCTGTGTT 59.454 34.615 0.00 0.00 40.71 3.32
233 234 3.558418 AGTTGTTTAGCCTGTGTTACGTG 59.442 43.478 0.00 0.00 0.00 4.49
234 235 3.455990 TGTTTAGCCTGTGTTACGTGA 57.544 42.857 0.00 0.00 0.00 4.35
280 285 1.801771 CGTGGCGAAGGTATTTTGTGA 59.198 47.619 0.00 0.00 0.00 3.58
290 295 5.606348 AGGTATTTTGTGAAAGCAACCAA 57.394 34.783 0.00 0.00 32.52 3.67
299 304 0.102300 AAAGCAACCAAAGTGCCGAC 59.898 50.000 0.00 0.00 0.00 4.79
315 320 2.526628 ACGGGAGTGAGGTCAGGT 59.473 61.111 0.00 0.00 44.82 4.00
316 321 1.606889 ACGGGAGTGAGGTCAGGTC 60.607 63.158 0.00 0.00 44.82 3.85
317 322 1.606601 CGGGAGTGAGGTCAGGTCA 60.607 63.158 0.00 0.00 0.00 4.02
318 323 0.972983 CGGGAGTGAGGTCAGGTCAT 60.973 60.000 0.00 0.00 0.00 3.06
319 324 0.539051 GGGAGTGAGGTCAGGTCATG 59.461 60.000 0.00 0.00 0.00 3.07
320 325 0.539051 GGAGTGAGGTCAGGTCATGG 59.461 60.000 0.00 0.00 0.00 3.66
321 326 1.270907 GAGTGAGGTCAGGTCATGGT 58.729 55.000 0.00 0.00 0.00 3.55
322 327 0.979665 AGTGAGGTCAGGTCATGGTG 59.020 55.000 0.00 0.00 0.00 4.17
323 328 0.674895 GTGAGGTCAGGTCATGGTGC 60.675 60.000 0.00 0.00 0.00 5.01
324 329 1.448540 GAGGTCAGGTCATGGTGCG 60.449 63.158 0.00 0.00 0.00 5.34
325 330 2.436646 GGTCAGGTCATGGTGCGG 60.437 66.667 0.00 0.00 0.00 5.69
326 331 3.127533 GTCAGGTCATGGTGCGGC 61.128 66.667 0.00 0.00 0.00 6.53
327 332 3.635191 TCAGGTCATGGTGCGGCA 61.635 61.111 0.00 0.00 0.00 5.69
328 333 2.438975 CAGGTCATGGTGCGGCAT 60.439 61.111 5.72 0.00 0.00 4.40
329 334 1.153188 CAGGTCATGGTGCGGCATA 60.153 57.895 5.72 0.00 0.00 3.14
330 335 1.146930 AGGTCATGGTGCGGCATAG 59.853 57.895 5.72 0.00 0.00 2.23
331 336 1.153168 GGTCATGGTGCGGCATAGT 60.153 57.895 5.72 0.00 0.00 2.12
332 337 0.105964 GGTCATGGTGCGGCATAGTA 59.894 55.000 5.72 0.00 0.00 1.82
333 338 1.270839 GGTCATGGTGCGGCATAGTAT 60.271 52.381 5.72 0.00 0.00 2.12
334 339 2.494059 GTCATGGTGCGGCATAGTATT 58.506 47.619 5.72 0.00 0.00 1.89
335 340 2.878406 GTCATGGTGCGGCATAGTATTT 59.122 45.455 5.72 0.00 0.00 1.40
336 341 3.315191 GTCATGGTGCGGCATAGTATTTT 59.685 43.478 5.72 0.00 0.00 1.82
337 342 3.951037 TCATGGTGCGGCATAGTATTTTT 59.049 39.130 5.72 0.00 0.00 1.94
356 361 4.935352 TTTTGAAAAGGTCAGGTCATGG 57.065 40.909 0.00 0.00 37.61 3.66
357 362 3.593442 TTGAAAAGGTCAGGTCATGGT 57.407 42.857 0.00 0.00 37.61 3.55
358 363 2.862541 TGAAAAGGTCAGGTCATGGTG 58.137 47.619 0.00 0.00 0.00 4.17
359 364 1.541588 GAAAAGGTCAGGTCATGGTGC 59.458 52.381 0.00 0.00 0.00 5.01
360 365 0.606401 AAAGGTCAGGTCATGGTGCG 60.606 55.000 0.00 0.00 0.00 5.34
361 366 2.436646 GGTCAGGTCATGGTGCGG 60.437 66.667 0.00 0.00 0.00 5.69
362 367 3.127533 GTCAGGTCATGGTGCGGC 61.128 66.667 0.00 0.00 0.00 6.53
363 368 3.635191 TCAGGTCATGGTGCGGCA 61.635 61.111 0.00 0.00 0.00 5.69
364 369 2.438975 CAGGTCATGGTGCGGCAT 60.439 61.111 5.72 0.00 0.00 4.40
365 370 1.153188 CAGGTCATGGTGCGGCATA 60.153 57.895 5.72 0.00 0.00 3.14
366 371 1.146930 AGGTCATGGTGCGGCATAG 59.853 57.895 5.72 0.00 0.00 2.23
367 372 1.153168 GGTCATGGTGCGGCATAGT 60.153 57.895 5.72 0.00 0.00 2.12
368 373 0.105964 GGTCATGGTGCGGCATAGTA 59.894 55.000 5.72 0.00 0.00 1.82
369 374 1.474320 GGTCATGGTGCGGCATAGTAA 60.474 52.381 5.72 0.00 0.00 2.24
370 375 1.597663 GTCATGGTGCGGCATAGTAAC 59.402 52.381 5.72 0.00 0.00 2.50
371 376 0.944386 CATGGTGCGGCATAGTAACC 59.056 55.000 5.72 1.51 0.00 2.85
372 377 0.179029 ATGGTGCGGCATAGTAACCC 60.179 55.000 5.72 0.68 0.00 4.11
373 378 1.268992 TGGTGCGGCATAGTAACCCT 61.269 55.000 5.72 0.00 0.00 4.34
374 379 0.532196 GGTGCGGCATAGTAACCCTC 60.532 60.000 5.72 0.00 0.00 4.30
375 380 0.532196 GTGCGGCATAGTAACCCTCC 60.532 60.000 5.72 0.00 0.00 4.30
376 381 1.070957 GCGGCATAGTAACCCTCCC 59.929 63.158 0.00 0.00 0.00 4.30
377 382 1.752833 CGGCATAGTAACCCTCCCC 59.247 63.158 0.00 0.00 0.00 4.81
378 383 1.752833 GGCATAGTAACCCTCCCCG 59.247 63.158 0.00 0.00 0.00 5.73
379 384 0.761702 GGCATAGTAACCCTCCCCGA 60.762 60.000 0.00 0.00 0.00 5.14
380 385 0.680061 GCATAGTAACCCTCCCCGAG 59.320 60.000 0.00 0.00 0.00 4.63
381 386 2.033208 GCATAGTAACCCTCCCCGAGT 61.033 57.143 0.00 0.00 0.00 4.18
382 387 2.395619 CATAGTAACCCTCCCCGAGTT 58.604 52.381 0.00 0.00 0.00 3.01
383 388 2.149973 TAGTAACCCTCCCCGAGTTC 57.850 55.000 0.00 0.00 0.00 3.01
384 389 0.616964 AGTAACCCTCCCCGAGTTCC 60.617 60.000 0.00 0.00 0.00 3.62
385 390 1.306397 TAACCCTCCCCGAGTTCCC 60.306 63.158 0.00 0.00 0.00 3.97
386 391 2.109494 TAACCCTCCCCGAGTTCCCA 62.109 60.000 0.00 0.00 0.00 4.37
387 392 2.366972 CCCTCCCCGAGTTCCCAT 60.367 66.667 0.00 0.00 0.00 4.00
388 393 2.001269 CCCTCCCCGAGTTCCCATT 61.001 63.158 0.00 0.00 0.00 3.16
389 394 1.224592 CCTCCCCGAGTTCCCATTG 59.775 63.158 0.00 0.00 0.00 2.82
390 395 1.562672 CCTCCCCGAGTTCCCATTGT 61.563 60.000 0.00 0.00 0.00 2.71
391 396 0.328258 CTCCCCGAGTTCCCATTGTT 59.672 55.000 0.00 0.00 0.00 2.83
392 397 0.774908 TCCCCGAGTTCCCATTGTTT 59.225 50.000 0.00 0.00 0.00 2.83
393 398 1.146152 TCCCCGAGTTCCCATTGTTTT 59.854 47.619 0.00 0.00 0.00 2.43
394 399 1.967779 CCCCGAGTTCCCATTGTTTTT 59.032 47.619 0.00 0.00 0.00 1.94
395 400 2.029380 CCCCGAGTTCCCATTGTTTTTC 60.029 50.000 0.00 0.00 0.00 2.29
396 401 2.890945 CCCGAGTTCCCATTGTTTTTCT 59.109 45.455 0.00 0.00 0.00 2.52
397 402 3.320826 CCCGAGTTCCCATTGTTTTTCTT 59.679 43.478 0.00 0.00 0.00 2.52
398 403 4.202212 CCCGAGTTCCCATTGTTTTTCTTT 60.202 41.667 0.00 0.00 0.00 2.52
399 404 5.356426 CCGAGTTCCCATTGTTTTTCTTTT 58.644 37.500 0.00 0.00 0.00 2.27
400 405 5.462068 CCGAGTTCCCATTGTTTTTCTTTTC 59.538 40.000 0.00 0.00 0.00 2.29
401 406 6.273071 CGAGTTCCCATTGTTTTTCTTTTCT 58.727 36.000 0.00 0.00 0.00 2.52
402 407 6.417930 CGAGTTCCCATTGTTTTTCTTTTCTC 59.582 38.462 0.00 0.00 0.00 2.87
403 408 7.423844 AGTTCCCATTGTTTTTCTTTTCTCT 57.576 32.000 0.00 0.00 0.00 3.10
404 409 7.492524 AGTTCCCATTGTTTTTCTTTTCTCTC 58.507 34.615 0.00 0.00 0.00 3.20
405 410 7.343057 AGTTCCCATTGTTTTTCTTTTCTCTCT 59.657 33.333 0.00 0.00 0.00 3.10
406 411 7.277174 TCCCATTGTTTTTCTTTTCTCTCTC 57.723 36.000 0.00 0.00 0.00 3.20
407 412 7.062957 TCCCATTGTTTTTCTTTTCTCTCTCT 58.937 34.615 0.00 0.00 0.00 3.10
408 413 7.229506 TCCCATTGTTTTTCTTTTCTCTCTCTC 59.770 37.037 0.00 0.00 0.00 3.20
409 414 7.230309 CCCATTGTTTTTCTTTTCTCTCTCTCT 59.770 37.037 0.00 0.00 0.00 3.10
410 415 8.628280 CCATTGTTTTTCTTTTCTCTCTCTCTT 58.372 33.333 0.00 0.00 0.00 2.85
420 425 8.132362 TCTTTTCTCTCTCTCTTTATATGTCGC 58.868 37.037 0.00 0.00 0.00 5.19
421 426 5.950758 TCTCTCTCTCTTTATATGTCGCC 57.049 43.478 0.00 0.00 0.00 5.54
422 427 5.626142 TCTCTCTCTCTTTATATGTCGCCT 58.374 41.667 0.00 0.00 0.00 5.52
423 428 5.471797 TCTCTCTCTCTTTATATGTCGCCTG 59.528 44.000 0.00 0.00 0.00 4.85
424 429 4.022762 TCTCTCTCTTTATATGTCGCCTGC 60.023 45.833 0.00 0.00 0.00 4.85
425 430 3.636764 TCTCTCTTTATATGTCGCCTGCA 59.363 43.478 0.00 0.00 0.00 4.41
426 431 4.281941 TCTCTCTTTATATGTCGCCTGCAT 59.718 41.667 0.00 0.00 0.00 3.96
427 432 4.960938 TCTCTTTATATGTCGCCTGCATT 58.039 39.130 0.00 0.00 0.00 3.56
428 433 5.368145 TCTCTTTATATGTCGCCTGCATTT 58.632 37.500 0.00 0.00 0.00 2.32
429 434 5.237127 TCTCTTTATATGTCGCCTGCATTTG 59.763 40.000 0.00 0.00 0.00 2.32
430 435 4.275689 TCTTTATATGTCGCCTGCATTTGG 59.724 41.667 0.00 0.00 0.00 3.28
431 436 0.670162 ATATGTCGCCTGCATTTGGC 59.330 50.000 5.39 5.39 46.42 4.52
498 503 5.105351 ACATGTCTGGATACGTTGATTCTCA 60.105 40.000 0.00 0.00 42.51 3.27
506 511 5.117745 GGATACGTTGATTCTCATCACGATG 59.882 44.000 0.00 0.33 39.28 3.84
539 553 6.264970 TGTGGCCGTGTATATATACAAGTGTA 59.735 38.462 26.70 15.18 44.11 2.90
556 570 8.461249 ACAAGTGTACCTCATCTTATATACGT 57.539 34.615 0.00 0.00 0.00 3.57
557 571 8.350722 ACAAGTGTACCTCATCTTATATACGTG 58.649 37.037 0.00 0.00 0.00 4.49
558 572 7.450124 AGTGTACCTCATCTTATATACGTGG 57.550 40.000 0.00 0.00 0.00 4.94
559 573 6.433404 AGTGTACCTCATCTTATATACGTGGG 59.567 42.308 0.00 0.00 0.00 4.61
560 574 6.432162 GTGTACCTCATCTTATATACGTGGGA 59.568 42.308 0.00 0.00 0.00 4.37
561 575 6.657966 TGTACCTCATCTTATATACGTGGGAG 59.342 42.308 0.00 0.00 0.00 4.30
562 576 5.642165 ACCTCATCTTATATACGTGGGAGT 58.358 41.667 0.00 0.00 0.00 3.85
563 577 5.711036 ACCTCATCTTATATACGTGGGAGTC 59.289 44.000 0.00 0.00 0.00 3.36
564 578 5.946972 CCTCATCTTATATACGTGGGAGTCT 59.053 44.000 0.00 0.00 0.00 3.24
565 579 6.127869 CCTCATCTTATATACGTGGGAGTCTG 60.128 46.154 0.00 0.00 0.00 3.51
566 580 5.710567 TCATCTTATATACGTGGGAGTCTGG 59.289 44.000 0.00 0.00 0.00 3.86
567 581 5.314718 TCTTATATACGTGGGAGTCTGGA 57.685 43.478 0.00 0.00 0.00 3.86
568 582 5.888901 TCTTATATACGTGGGAGTCTGGAT 58.111 41.667 0.00 0.00 0.00 3.41
569 583 6.312529 TCTTATATACGTGGGAGTCTGGATT 58.687 40.000 0.00 0.00 0.00 3.01
570 584 6.781014 TCTTATATACGTGGGAGTCTGGATTT 59.219 38.462 0.00 0.00 0.00 2.17
571 585 7.946219 TCTTATATACGTGGGAGTCTGGATTTA 59.054 37.037 0.00 0.00 0.00 1.40
572 586 8.660295 TTATATACGTGGGAGTCTGGATTTAT 57.340 34.615 0.00 0.00 0.00 1.40
573 587 5.888982 ATACGTGGGAGTCTGGATTTATT 57.111 39.130 0.00 0.00 0.00 1.40
574 588 3.873910 ACGTGGGAGTCTGGATTTATTG 58.126 45.455 0.00 0.00 0.00 1.90
575 589 3.263425 ACGTGGGAGTCTGGATTTATTGT 59.737 43.478 0.00 0.00 0.00 2.71
576 590 4.468510 ACGTGGGAGTCTGGATTTATTGTA 59.531 41.667 0.00 0.00 0.00 2.41
577 591 4.809426 CGTGGGAGTCTGGATTTATTGTAC 59.191 45.833 0.00 0.00 0.00 2.90
578 592 5.123936 GTGGGAGTCTGGATTTATTGTACC 58.876 45.833 0.00 0.00 0.00 3.34
579 593 4.785914 TGGGAGTCTGGATTTATTGTACCA 59.214 41.667 0.00 0.00 0.00 3.25
580 594 5.123936 GGGAGTCTGGATTTATTGTACCAC 58.876 45.833 0.00 0.00 0.00 4.16
581 595 5.338871 GGGAGTCTGGATTTATTGTACCACA 60.339 44.000 0.00 0.00 0.00 4.17
582 596 6.177610 GGAGTCTGGATTTATTGTACCACAA 58.822 40.000 0.00 0.00 42.95 3.33
584 598 7.990886 GGAGTCTGGATTTATTGTACCACAATA 59.009 37.037 7.49 7.49 46.11 1.90
585 599 9.561069 GAGTCTGGATTTATTGTACCACAATAT 57.439 33.333 11.43 0.91 46.69 1.28
586 600 9.920946 AGTCTGGATTTATTGTACCACAATATT 57.079 29.630 11.43 4.37 46.69 1.28
608 622 9.799223 ATATTTTTATACCCTCTATCTAGCCCA 57.201 33.333 0.00 0.00 0.00 5.36
609 623 8.701643 ATTTTTATACCCTCTATCTAGCCCAT 57.298 34.615 0.00 0.00 0.00 4.00
610 624 8.520119 TTTTTATACCCTCTATCTAGCCCATT 57.480 34.615 0.00 0.00 0.00 3.16
611 625 7.735326 TTTATACCCTCTATCTAGCCCATTC 57.265 40.000 0.00 0.00 0.00 2.67
612 626 3.637821 ACCCTCTATCTAGCCCATTCA 57.362 47.619 0.00 0.00 0.00 2.57
613 627 3.515562 ACCCTCTATCTAGCCCATTCAG 58.484 50.000 0.00 0.00 0.00 3.02
614 628 3.116551 ACCCTCTATCTAGCCCATTCAGT 60.117 47.826 0.00 0.00 0.00 3.41
615 629 3.906846 CCCTCTATCTAGCCCATTCAGTT 59.093 47.826 0.00 0.00 0.00 3.16
616 630 4.349342 CCCTCTATCTAGCCCATTCAGTTT 59.651 45.833 0.00 0.00 0.00 2.66
617 631 5.303971 CCTCTATCTAGCCCATTCAGTTTG 58.696 45.833 0.00 0.00 0.00 2.93
618 632 4.708177 TCTATCTAGCCCATTCAGTTTGC 58.292 43.478 0.00 0.00 0.00 3.68
619 633 1.737838 TCTAGCCCATTCAGTTTGCG 58.262 50.000 0.00 0.00 0.00 4.85
620 634 1.003118 TCTAGCCCATTCAGTTTGCGT 59.997 47.619 0.00 0.00 0.00 5.24
621 635 1.398390 CTAGCCCATTCAGTTTGCGTC 59.602 52.381 0.00 0.00 0.00 5.19
622 636 0.537143 AGCCCATTCAGTTTGCGTCA 60.537 50.000 0.00 0.00 0.00 4.35
623 637 0.109597 GCCCATTCAGTTTGCGTCAG 60.110 55.000 0.00 0.00 0.00 3.51
624 638 0.523072 CCCATTCAGTTTGCGTCAGG 59.477 55.000 0.00 0.00 0.00 3.86
625 639 1.522668 CCATTCAGTTTGCGTCAGGA 58.477 50.000 0.00 0.00 0.00 3.86
626 640 1.466167 CCATTCAGTTTGCGTCAGGAG 59.534 52.381 0.00 0.00 0.00 3.69
627 641 2.146342 CATTCAGTTTGCGTCAGGAGT 58.854 47.619 0.00 0.00 0.00 3.85
628 642 1.581934 TTCAGTTTGCGTCAGGAGTG 58.418 50.000 0.00 0.00 0.00 3.51
629 643 0.249868 TCAGTTTGCGTCAGGAGTGG 60.250 55.000 0.00 0.00 0.00 4.00
630 644 0.532862 CAGTTTGCGTCAGGAGTGGT 60.533 55.000 0.00 0.00 0.00 4.16
631 645 0.532862 AGTTTGCGTCAGGAGTGGTG 60.533 55.000 0.00 0.00 0.00 4.17
632 646 1.891919 TTTGCGTCAGGAGTGGTGC 60.892 57.895 0.00 0.00 0.00 5.01
633 647 2.324014 TTTGCGTCAGGAGTGGTGCT 62.324 55.000 0.00 0.00 0.00 4.40
634 648 1.468506 TTGCGTCAGGAGTGGTGCTA 61.469 55.000 0.00 0.00 0.00 3.49
635 649 1.257750 TGCGTCAGGAGTGGTGCTAT 61.258 55.000 0.00 0.00 0.00 2.97
636 650 0.108138 GCGTCAGGAGTGGTGCTATT 60.108 55.000 0.00 0.00 0.00 1.73
637 651 1.927895 CGTCAGGAGTGGTGCTATTC 58.072 55.000 0.00 0.00 0.00 1.75
638 652 1.478510 CGTCAGGAGTGGTGCTATTCT 59.521 52.381 0.00 0.00 0.00 2.40
639 653 2.093973 CGTCAGGAGTGGTGCTATTCTT 60.094 50.000 0.00 0.00 0.00 2.52
640 654 3.130516 CGTCAGGAGTGGTGCTATTCTTA 59.869 47.826 0.00 0.00 0.00 2.10
641 655 4.202161 CGTCAGGAGTGGTGCTATTCTTAT 60.202 45.833 0.00 0.00 0.00 1.73
642 656 5.009710 CGTCAGGAGTGGTGCTATTCTTATA 59.990 44.000 0.00 0.00 0.00 0.98
643 657 6.294787 CGTCAGGAGTGGTGCTATTCTTATAT 60.295 42.308 0.00 0.00 0.00 0.86
644 658 7.094334 CGTCAGGAGTGGTGCTATTCTTATATA 60.094 40.741 0.00 0.00 0.00 0.86
645 659 8.247562 GTCAGGAGTGGTGCTATTCTTATATAG 58.752 40.741 0.00 0.00 0.00 1.31
646 660 8.170730 TCAGGAGTGGTGCTATTCTTATATAGA 58.829 37.037 0.00 0.00 31.10 1.98
647 661 8.807118 CAGGAGTGGTGCTATTCTTATATAGAA 58.193 37.037 0.00 0.00 46.50 2.10
648 662 9.030452 AGGAGTGGTGCTATTCTTATATAGAAG 57.970 37.037 0.41 0.41 45.69 2.85
649 663 9.026121 GGAGTGGTGCTATTCTTATATAGAAGA 57.974 37.037 5.70 5.70 45.69 2.87
669 683 8.932945 AGAAGATTCACCTTTTTGTTTCTTTC 57.067 30.769 0.00 0.00 0.00 2.62
670 684 8.531146 AGAAGATTCACCTTTTTGTTTCTTTCA 58.469 29.630 0.00 0.00 0.00 2.69
671 685 9.150348 GAAGATTCACCTTTTTGTTTCTTTCAA 57.850 29.630 0.00 0.00 0.00 2.69
672 686 9.500785 AAGATTCACCTTTTTGTTTCTTTCAAA 57.499 25.926 0.00 0.00 33.76 2.69
673 687 8.935844 AGATTCACCTTTTTGTTTCTTTCAAAC 58.064 29.630 0.00 0.00 35.05 2.93
674 688 7.428282 TTCACCTTTTTGTTTCTTTCAAACC 57.572 32.000 0.00 0.00 35.05 3.27
675 689 6.525629 TCACCTTTTTGTTTCTTTCAAACCA 58.474 32.000 0.00 0.00 35.05 3.67
676 690 6.648725 TCACCTTTTTGTTTCTTTCAAACCAG 59.351 34.615 0.00 0.00 35.05 4.00
677 691 6.648725 CACCTTTTTGTTTCTTTCAAACCAGA 59.351 34.615 0.00 0.00 35.05 3.86
678 692 6.873605 ACCTTTTTGTTTCTTTCAAACCAGAG 59.126 34.615 0.00 0.00 35.05 3.35
679 693 7.096551 CCTTTTTGTTTCTTTCAAACCAGAGA 58.903 34.615 0.00 0.00 35.05 3.10
680 694 7.602265 CCTTTTTGTTTCTTTCAAACCAGAGAA 59.398 33.333 0.00 0.00 35.05 2.87
681 695 7.883229 TTTTGTTTCTTTCAAACCAGAGAAC 57.117 32.000 0.00 0.00 35.05 3.01
682 696 6.582677 TTGTTTCTTTCAAACCAGAGAACA 57.417 33.333 0.00 0.00 0.00 3.18
683 697 6.773976 TGTTTCTTTCAAACCAGAGAACAT 57.226 33.333 0.00 0.00 0.00 2.71
684 698 7.169158 TGTTTCTTTCAAACCAGAGAACATT 57.831 32.000 0.00 0.00 0.00 2.71
685 699 7.610865 TGTTTCTTTCAAACCAGAGAACATTT 58.389 30.769 0.00 0.00 0.00 2.32
686 700 7.545265 TGTTTCTTTCAAACCAGAGAACATTTG 59.455 33.333 0.00 0.00 34.11 2.32
687 701 7.403312 TTCTTTCAAACCAGAGAACATTTGA 57.597 32.000 0.00 0.00 38.85 2.69
688 702 6.795399 TCTTTCAAACCAGAGAACATTTGAC 58.205 36.000 0.00 0.00 39.96 3.18
689 703 5.514274 TTCAAACCAGAGAACATTTGACC 57.486 39.130 0.00 0.00 39.96 4.02
690 704 4.792068 TCAAACCAGAGAACATTTGACCT 58.208 39.130 0.00 0.00 36.42 3.85
691 705 5.200483 TCAAACCAGAGAACATTTGACCTT 58.800 37.500 0.00 0.00 36.42 3.50
692 706 5.067674 TCAAACCAGAGAACATTTGACCTTG 59.932 40.000 0.00 0.00 36.42 3.61
693 707 2.887152 ACCAGAGAACATTTGACCTTGC 59.113 45.455 0.00 0.00 0.00 4.01
694 708 2.886523 CCAGAGAACATTTGACCTTGCA 59.113 45.455 0.00 0.00 0.00 4.08
695 709 3.318839 CCAGAGAACATTTGACCTTGCAA 59.681 43.478 0.00 0.00 0.00 4.08
696 710 4.293415 CAGAGAACATTTGACCTTGCAAC 58.707 43.478 0.00 0.00 0.00 4.17
697 711 4.037208 CAGAGAACATTTGACCTTGCAACT 59.963 41.667 0.00 0.00 0.00 3.16
698 712 4.646492 AGAGAACATTTGACCTTGCAACTT 59.354 37.500 0.00 0.00 0.00 2.66
699 713 5.127682 AGAGAACATTTGACCTTGCAACTTT 59.872 36.000 0.00 0.00 0.00 2.66
700 714 5.111293 AGAACATTTGACCTTGCAACTTTG 58.889 37.500 0.00 0.00 0.00 2.77
713 727 3.026630 CAACTTTGCAGGTCGACTAGA 57.973 47.619 16.46 0.00 0.00 2.43
724 738 1.324383 TCGACTAGACACAACTGCCA 58.676 50.000 0.00 0.00 0.00 4.92
725 739 1.000607 TCGACTAGACACAACTGCCAC 60.001 52.381 0.00 0.00 0.00 5.01
726 740 1.000163 CGACTAGACACAACTGCCACT 60.000 52.381 0.00 0.00 0.00 4.00
727 741 2.678324 GACTAGACACAACTGCCACTC 58.322 52.381 0.00 0.00 0.00 3.51
728 742 1.000163 ACTAGACACAACTGCCACTCG 60.000 52.381 0.00 0.00 0.00 4.18
729 743 1.000163 CTAGACACAACTGCCACTCGT 60.000 52.381 0.00 0.00 0.00 4.18
730 744 0.178068 AGACACAACTGCCACTCGTT 59.822 50.000 0.00 0.00 0.00 3.85
731 745 0.304705 GACACAACTGCCACTCGTTG 59.695 55.000 0.00 0.00 44.48 4.10
732 746 4.954933 ACAACTGCCACTCGTTGT 57.045 50.000 2.27 2.27 46.28 3.32
738 752 5.351233 CAACTGCCACTCGTTGTATAAAA 57.649 39.130 0.00 0.00 36.61 1.52
739 753 5.938322 CAACTGCCACTCGTTGTATAAAAT 58.062 37.500 0.00 0.00 36.61 1.82
740 754 5.545658 ACTGCCACTCGTTGTATAAAATG 57.454 39.130 0.00 0.00 0.00 2.32
741 755 5.001232 ACTGCCACTCGTTGTATAAAATGT 58.999 37.500 0.00 0.00 0.00 2.71
742 756 5.472137 ACTGCCACTCGTTGTATAAAATGTT 59.528 36.000 0.00 0.00 0.00 2.71
743 757 6.016610 ACTGCCACTCGTTGTATAAAATGTTT 60.017 34.615 0.00 0.00 0.00 2.83
744 758 6.375377 TGCCACTCGTTGTATAAAATGTTTC 58.625 36.000 0.00 0.00 0.00 2.78
745 759 5.798434 GCCACTCGTTGTATAAAATGTTTCC 59.202 40.000 0.00 0.00 0.00 3.13
746 760 6.568844 GCCACTCGTTGTATAAAATGTTTCCA 60.569 38.462 0.00 0.00 0.00 3.53
747 761 7.364200 CCACTCGTTGTATAAAATGTTTCCAA 58.636 34.615 0.00 0.00 0.00 3.53
748 762 8.026607 CCACTCGTTGTATAAAATGTTTCCAAT 58.973 33.333 0.00 0.00 0.00 3.16
749 763 9.405587 CACTCGTTGTATAAAATGTTTCCAATT 57.594 29.630 0.00 0.00 0.00 2.32
750 764 9.974980 ACTCGTTGTATAAAATGTTTCCAATTT 57.025 25.926 0.00 0.00 0.00 1.82
829 846 1.949799 AGATGAGGAGAGGCAACAGT 58.050 50.000 0.00 0.00 41.41 3.55
840 857 4.087182 AGAGGCAACAGTAGTAGTAGCAA 58.913 43.478 0.00 0.00 41.41 3.91
876 893 3.537580 TCGGTAGACTTTTGCAAGTTGT 58.462 40.909 4.48 0.00 43.79 3.32
926 943 3.799281 TTCTTGTGGAAGCAACCAAAG 57.201 42.857 3.52 9.44 41.87 2.77
934 951 4.038080 GCAACCAAAGGGCCGACG 62.038 66.667 0.00 0.00 37.90 5.12
1074 1091 1.486310 CTGCCAGTGCCAGTAATCCTA 59.514 52.381 0.00 0.00 36.33 2.94
1090 1107 5.441718 AATCCTAGTTCTCATCTTTGCCA 57.558 39.130 0.00 0.00 0.00 4.92
1091 1108 5.643421 ATCCTAGTTCTCATCTTTGCCAT 57.357 39.130 0.00 0.00 0.00 4.40
1095 1112 2.097825 GTTCTCATCTTTGCCATGGCT 58.902 47.619 35.53 14.23 42.51 4.75
1132 1149 4.012895 GCCGACACAAGTGCGGTG 62.013 66.667 25.31 10.94 45.32 4.94
1155 1174 1.295020 TCGACATCCCCTTCCCATTT 58.705 50.000 0.00 0.00 0.00 2.32
1267 1286 1.374758 AAGTACGTCAGGCAGCAGC 60.375 57.895 0.00 0.00 41.10 5.25
1338 1393 1.067821 AGCTTATCAGTCGCTACAGGC 59.932 52.381 0.00 0.00 37.64 4.85
1381 1436 1.070134 TCTCCTACCACTGCAACACAC 59.930 52.381 0.00 0.00 0.00 3.82
1420 1475 2.151202 CCATGGCACCGTATATGGAAC 58.849 52.381 18.22 8.51 42.05 3.62
1437 1492 2.436646 CTCCTGGGCACGCGATTT 60.437 61.111 15.93 0.00 0.00 2.17
1542 1605 2.399916 TGTTTGCTTGCCTTGCTTTT 57.600 40.000 0.00 0.00 0.00 2.27
1693 1777 4.054085 CGTGCTCCTATGGCATGG 57.946 61.111 10.98 7.13 41.41 3.66
1871 1955 2.266627 GCCTCAGCAGCAACAGCTT 61.267 57.895 0.00 0.00 41.14 3.74
1899 1983 4.142687 GCCAATGCAACATACGGATATACC 60.143 45.833 0.00 0.00 37.47 2.73
2053 2158 9.693739 TTCCTAAAATGTCCAACATACATACAT 57.306 29.630 0.00 0.00 37.97 2.29
2071 2176 6.876789 ACATACATGACAATTCGTTAACTCCA 59.123 34.615 0.00 0.00 0.00 3.86
2106 2215 4.251268 TCTTCAGACATTGATGAGTGCAG 58.749 43.478 0.00 0.00 35.67 4.41
2197 2309 3.065371 GCAAATTCGGAATGAAGGACGAT 59.935 43.478 3.59 0.00 40.65 3.73
2274 2396 4.341520 GGGTAAGCTACTACTACACTGCAT 59.658 45.833 0.00 0.00 0.00 3.96
2279 2401 7.406031 AAGCTACTACTACACTGCATTAAGA 57.594 36.000 0.00 0.00 0.00 2.10
2280 2402 7.589958 AGCTACTACTACACTGCATTAAGAT 57.410 36.000 0.00 0.00 0.00 2.40
2281 2403 7.429633 AGCTACTACTACACTGCATTAAGATG 58.570 38.462 0.00 0.00 36.32 2.90
2283 2405 7.168302 GCTACTACTACACTGCATTAAGATGTG 59.832 40.741 0.00 0.00 35.63 3.21
2285 2407 7.036220 ACTACTACACTGCATTAAGATGTGTC 58.964 38.462 8.70 0.00 41.35 3.67
2288 2634 4.005650 ACACTGCATTAAGATGTGTCCTG 58.994 43.478 0.20 0.00 37.29 3.86
2308 2654 4.418392 CTGCTGTTGCCAATCTAAATCAC 58.582 43.478 0.00 0.00 38.71 3.06
2309 2655 4.081406 TGCTGTTGCCAATCTAAATCACT 58.919 39.130 0.00 0.00 38.71 3.41
2599 4909 6.371548 TCCTTACTGCAATTTACAAGCTACTG 59.628 38.462 0.00 0.00 0.00 2.74
2638 4949 6.743575 AATTAAGTTCTGGATTTGTCCGAG 57.256 37.500 0.00 0.00 0.00 4.63
2900 5247 7.337942 CCTCTTGGCTGTCTTGTTTTAGATTAT 59.662 37.037 0.00 0.00 0.00 1.28
2904 5251 9.691362 TTGGCTGTCTTGTTTTAGATTATTTTC 57.309 29.630 0.00 0.00 0.00 2.29
3225 5600 7.388437 TCAAGCCAATTTTGAAGAATAGCAAT 58.612 30.769 0.00 0.00 31.98 3.56
3669 6044 3.815856 TCTAGGCTGATTGCAAGAGAG 57.184 47.619 4.94 1.44 45.15 3.20
4106 6482 4.830046 AGCAGCGAGATCTCCTAGAATAAA 59.170 41.667 17.13 0.00 0.00 1.40
4112 6488 9.030452 AGCGAGATCTCCTAGAATAAATGTAAT 57.970 33.333 17.13 0.00 0.00 1.89
4129 6505 2.793278 AATCGTGTTTTGAAGGTGGC 57.207 45.000 0.00 0.00 0.00 5.01
4133 6509 0.030235 GTGTTTTGAAGGTGGCCGAC 59.970 55.000 0.00 0.00 0.00 4.79
4172 6548 3.345414 TGTAACCGTGTTTCAAACCACT 58.655 40.909 0.00 0.00 0.00 4.00
4174 6550 4.332268 TGTAACCGTGTTTCAAACCACTAC 59.668 41.667 0.00 0.00 0.00 2.73
4178 6554 4.460034 ACCGTGTTTCAAACCACTACTTTT 59.540 37.500 0.00 0.00 0.00 2.27
4179 6555 5.047872 ACCGTGTTTCAAACCACTACTTTTT 60.048 36.000 0.00 0.00 0.00 1.94
4180 6556 6.150809 ACCGTGTTTCAAACCACTACTTTTTA 59.849 34.615 0.00 0.00 0.00 1.52
4181 6557 6.469915 CCGTGTTTCAAACCACTACTTTTTAC 59.530 38.462 0.00 0.00 0.00 2.01
4182 6558 6.469915 CGTGTTTCAAACCACTACTTTTTACC 59.530 38.462 0.00 0.00 0.00 2.85
4183 6559 7.314393 GTGTTTCAAACCACTACTTTTTACCA 58.686 34.615 0.00 0.00 0.00 3.25
4184 6560 7.813627 GTGTTTCAAACCACTACTTTTTACCAA 59.186 33.333 0.00 0.00 0.00 3.67
4185 6561 8.365647 TGTTTCAAACCACTACTTTTTACCAAA 58.634 29.630 0.00 0.00 0.00 3.28
4186 6562 9.373603 GTTTCAAACCACTACTTTTTACCAAAT 57.626 29.630 0.00 0.00 0.00 2.32
4187 6563 9.945904 TTTCAAACCACTACTTTTTACCAAATT 57.054 25.926 0.00 0.00 0.00 1.82
4188 6564 9.945904 TTCAAACCACTACTTTTTACCAAATTT 57.054 25.926 0.00 0.00 0.00 1.82
4189 6565 9.372369 TCAAACCACTACTTTTTACCAAATTTG 57.628 29.630 11.40 11.40 0.00 2.32
4249 6625 8.993121 CAGAGTATGTACAGTTTCAATGAACTT 58.007 33.333 0.33 0.00 37.76 2.66
4262 6638 9.836076 GTTTCAATGAACTTTATAGGTTGTACC 57.164 33.333 0.00 0.00 38.99 3.34
4305 6681 3.067684 GCCCTCACTTTGGCTTAAGTA 57.932 47.619 4.02 0.00 44.46 2.24
4322 6698 6.315393 GCTTAAGTATTGGCTGCTGTTTACTA 59.685 38.462 4.02 0.00 0.00 1.82
4332 6708 5.412904 GGCTGCTGTTTACTAAGAAGTGATT 59.587 40.000 0.00 0.00 36.36 2.57
4340 6716 9.158233 TGTTTACTAAGAAGTGATTAATTCCCG 57.842 33.333 0.00 0.00 36.36 5.14
4347 6723 2.174639 AGTGATTAATTCCCGCCCATGA 59.825 45.455 0.00 0.00 0.00 3.07
4363 6739 5.977129 CGCCCATGATGTTATTCCTTTAAAC 59.023 40.000 0.00 0.00 0.00 2.01
4364 6740 6.183360 CGCCCATGATGTTATTCCTTTAAACT 60.183 38.462 0.00 0.00 0.00 2.66
4396 6772 9.816354 TTTTTCTAGTTTCAAATTTTGGAGAGG 57.184 29.630 9.18 0.00 0.00 3.69
4431 6807 0.830648 TGTGGAGGGCACATAGCTAC 59.169 55.000 0.00 0.00 44.79 3.58
4443 6819 7.998964 AGGGCACATAGCTACTAAAATATGTTT 59.001 33.333 0.00 0.00 44.79 2.83
4451 6827 8.950208 AGCTACTAAAATATGTTTCTCCAGAC 57.050 34.615 0.00 0.00 0.00 3.51
4470 6846 9.170734 CTCCAGACATAAAATCTTTTGAGATCA 57.829 33.333 0.00 0.00 0.00 2.92
4514 6890 6.380079 AGGGACAACTCTAGTGAAATGATT 57.620 37.500 0.00 0.00 0.00 2.57
4515 6891 7.496346 AGGGACAACTCTAGTGAAATGATTA 57.504 36.000 0.00 0.00 0.00 1.75
4516 6892 7.331791 AGGGACAACTCTAGTGAAATGATTAC 58.668 38.462 0.00 0.00 0.00 1.89
4517 6893 7.038302 AGGGACAACTCTAGTGAAATGATTACA 60.038 37.037 0.00 0.00 0.00 2.41
4518 6894 7.606456 GGGACAACTCTAGTGAAATGATTACAA 59.394 37.037 0.00 0.00 0.00 2.41
4574 6950 2.496899 ACCATCTGAAATGCTTCCGT 57.503 45.000 0.00 0.00 0.00 4.69
4597 6973 8.079203 CCGTATAGCATATTTACCAAAAATGCA 58.921 33.333 8.17 0.00 39.24 3.96
4598 6974 9.624697 CGTATAGCATATTTACCAAAAATGCAT 57.375 29.630 8.17 0.00 39.24 3.96
4602 6978 8.789825 AGCATATTTACCAAAAATGCATCAAA 57.210 26.923 0.00 0.00 39.24 2.69
4603 6979 9.398538 AGCATATTTACCAAAAATGCATCAAAT 57.601 25.926 0.00 1.03 39.24 2.32
4604 6980 9.440784 GCATATTTACCAAAAATGCATCAAATG 57.559 29.630 0.00 0.00 38.09 2.32
4605 6981 9.938670 CATATTTACCAAAAATGCATCAAATGG 57.061 29.630 15.35 15.35 0.00 3.16
4606 6982 9.902684 ATATTTACCAAAAATGCATCAAATGGA 57.097 25.926 20.95 5.77 34.26 3.41
4607 6983 8.632906 ATTTACCAAAAATGCATCAAATGGAA 57.367 26.923 20.95 10.58 33.18 3.53
4627 7005 6.248433 TGGAAGATTACAGAGAAAAGCCAAT 58.752 36.000 0.00 0.00 0.00 3.16
4681 7059 1.064825 ATTTCGGGTCTGGGTCTTGT 58.935 50.000 0.00 0.00 0.00 3.16
4687 7065 0.251209 GGTCTGGGTCTTGTTTCCCC 60.251 60.000 0.00 0.00 42.80 4.81
4688 7066 0.251209 GTCTGGGTCTTGTTTCCCCC 60.251 60.000 0.00 0.00 42.80 5.40
4703 7081 7.811482 TGTTTCCCCCACTAATAACTAACTA 57.189 36.000 0.00 0.00 0.00 2.24
4736 7114 2.241176 TCTAATCCCAGCCCGTGAAAAT 59.759 45.455 0.00 0.00 0.00 1.82
4738 7116 0.395724 ATCCCAGCCCGTGAAAATCC 60.396 55.000 0.00 0.00 0.00 3.01
4739 7117 2.052104 CCCAGCCCGTGAAAATCCC 61.052 63.158 0.00 0.00 0.00 3.85
4740 7118 1.000896 CCAGCCCGTGAAAATCCCT 60.001 57.895 0.00 0.00 0.00 4.20
4741 7119 0.611896 CCAGCCCGTGAAAATCCCTT 60.612 55.000 0.00 0.00 0.00 3.95
4742 7120 1.340600 CCAGCCCGTGAAAATCCCTTA 60.341 52.381 0.00 0.00 0.00 2.69
4743 7121 2.442413 CAGCCCGTGAAAATCCCTTAA 58.558 47.619 0.00 0.00 0.00 1.85
4744 7122 2.163613 CAGCCCGTGAAAATCCCTTAAC 59.836 50.000 0.00 0.00 0.00 2.01
4745 7123 1.475280 GCCCGTGAAAATCCCTTAACC 59.525 52.381 0.00 0.00 0.00 2.85
4746 7124 2.797786 CCCGTGAAAATCCCTTAACCA 58.202 47.619 0.00 0.00 0.00 3.67
4747 7125 2.752903 CCCGTGAAAATCCCTTAACCAG 59.247 50.000 0.00 0.00 0.00 4.00
4750 7128 4.324267 CGTGAAAATCCCTTAACCAGTCT 58.676 43.478 0.00 0.00 0.00 3.24
4751 7129 4.154195 CGTGAAAATCCCTTAACCAGTCTG 59.846 45.833 0.00 0.00 0.00 3.51
4752 7130 5.070685 GTGAAAATCCCTTAACCAGTCTGT 58.929 41.667 0.00 0.00 0.00 3.41
4753 7131 5.535030 GTGAAAATCCCTTAACCAGTCTGTT 59.465 40.000 0.00 0.00 0.00 3.16
4754 7132 5.534654 TGAAAATCCCTTAACCAGTCTGTTG 59.465 40.000 0.00 0.00 0.00 3.33
4755 7133 4.993705 AATCCCTTAACCAGTCTGTTGA 57.006 40.909 0.00 0.00 0.00 3.18
4756 7134 5.520748 AATCCCTTAACCAGTCTGTTGAT 57.479 39.130 0.00 0.00 0.00 2.57
4757 7135 4.286297 TCCCTTAACCAGTCTGTTGATG 57.714 45.455 0.00 0.00 0.00 3.07
4758 7136 3.650942 TCCCTTAACCAGTCTGTTGATGT 59.349 43.478 0.00 0.00 0.00 3.06
4759 7137 4.841813 TCCCTTAACCAGTCTGTTGATGTA 59.158 41.667 0.00 0.00 0.00 2.29
4760 7138 5.046591 TCCCTTAACCAGTCTGTTGATGTAG 60.047 44.000 0.00 0.00 0.00 2.74
4761 7139 4.631813 CCTTAACCAGTCTGTTGATGTAGC 59.368 45.833 0.00 0.00 0.00 3.58
4762 7140 3.769739 AACCAGTCTGTTGATGTAGCA 57.230 42.857 0.00 0.00 0.00 3.49
4763 7141 3.988976 ACCAGTCTGTTGATGTAGCAT 57.011 42.857 0.00 0.00 0.00 3.79
4764 7142 3.603532 ACCAGTCTGTTGATGTAGCATG 58.396 45.455 0.00 0.00 0.00 4.06
4765 7143 2.941064 CCAGTCTGTTGATGTAGCATGG 59.059 50.000 0.00 0.00 0.00 3.66
4766 7144 3.603532 CAGTCTGTTGATGTAGCATGGT 58.396 45.455 1.62 1.62 0.00 3.55
4767 7145 4.005650 CAGTCTGTTGATGTAGCATGGTT 58.994 43.478 1.12 0.00 0.00 3.67
4768 7146 4.093998 CAGTCTGTTGATGTAGCATGGTTC 59.906 45.833 1.12 0.00 0.00 3.62
4769 7147 3.062639 GTCTGTTGATGTAGCATGGTTCG 59.937 47.826 1.12 0.00 0.00 3.95
4770 7148 1.737236 TGTTGATGTAGCATGGTTCGC 59.263 47.619 1.12 0.00 0.00 4.70
4771 7149 1.737236 GTTGATGTAGCATGGTTCGCA 59.263 47.619 1.12 0.63 0.00 5.10
4772 7150 2.330440 TGATGTAGCATGGTTCGCAT 57.670 45.000 1.12 5.88 0.00 4.73
4815 9547 9.874205 AATAATTCCAATGTCAACCAATTGTAG 57.126 29.630 4.43 0.00 37.11 2.74
4847 9579 8.950208 GGTGGAAGCTATTGGATATATTAGAC 57.050 38.462 0.00 0.00 0.00 2.59
4926 9658 9.646427 TTTAATTTTGTGCCCTAACATAATCAC 57.354 29.630 0.00 0.00 32.65 3.06
4929 9661 2.285083 GTGCCCTAACATAATCACGCA 58.715 47.619 0.00 0.00 0.00 5.24
4941 9673 5.923114 ACATAATCACGCAAGAGCATACTAG 59.077 40.000 0.00 0.00 42.27 2.57
4947 9679 4.032217 CACGCAAGAGCATACTAGACAAAG 59.968 45.833 0.00 0.00 42.27 2.77
5019 9752 6.201591 GGAGAGGGGTGAATAGATCATATCT 58.798 44.000 0.00 0.00 40.97 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 6.234920 TGTACTAATGTGTGTTAGGCATGTT 58.765 36.000 0.00 0.00 36.27 2.71
85 86 9.769677 AGGCTTGACTATCATACTATAATACCA 57.230 33.333 0.00 0.00 0.00 3.25
95 96 4.320641 GGACGAGAGGCTTGACTATCATAC 60.321 50.000 0.00 0.00 40.87 2.39
99 100 2.303175 AGGACGAGAGGCTTGACTATC 58.697 52.381 0.00 0.00 40.87 2.08
103 104 0.892063 AGAAGGACGAGAGGCTTGAC 59.108 55.000 0.00 0.00 40.87 3.18
143 144 9.710900 ATCATGCATGTCGACTAGATAATTTTA 57.289 29.630 25.43 0.57 0.00 1.52
144 145 8.613060 ATCATGCATGTCGACTAGATAATTTT 57.387 30.769 25.43 0.00 0.00 1.82
157 158 5.758570 CATGACTAGTATCATGCATGTCG 57.241 43.478 25.43 11.18 46.99 4.35
176 177 7.275920 AGCCTACCTAAAATAGAAGTGTCATG 58.724 38.462 0.00 0.00 0.00 3.07
181 182 9.886132 TTTCTAAGCCTACCTAAAATAGAAGTG 57.114 33.333 0.00 0.00 31.71 3.16
189 190 9.444600 CAACTGTATTTCTAAGCCTACCTAAAA 57.555 33.333 0.00 0.00 0.00 1.52
195 196 8.388853 GCTAAACAACTGTATTTCTAAGCCTAC 58.611 37.037 0.00 0.00 0.00 3.18
211 212 3.558418 CACGTAACACAGGCTAAACAACT 59.442 43.478 0.00 0.00 0.00 3.16
222 223 4.466567 TGAGCAAAATCACGTAACACAG 57.533 40.909 0.00 0.00 0.00 3.66
252 253 2.594962 CCTTCGCCACGTCACACAC 61.595 63.158 0.00 0.00 0.00 3.82
264 269 3.896122 TGCTTTCACAAAATACCTTCGC 58.104 40.909 0.00 0.00 0.00 4.70
265 270 4.679654 GGTTGCTTTCACAAAATACCTTCG 59.320 41.667 0.00 0.00 0.00 3.79
280 285 0.102300 GTCGGCACTTTGGTTGCTTT 59.898 50.000 0.00 0.00 0.00 3.51
290 295 2.915659 TCACTCCCGTCGGCACTT 60.916 61.111 5.50 0.00 0.00 3.16
299 304 0.972983 ATGACCTGACCTCACTCCCG 60.973 60.000 0.00 0.00 0.00 5.14
305 310 1.679311 GCACCATGACCTGACCTCA 59.321 57.895 0.00 0.00 0.00 3.86
306 311 1.448540 CGCACCATGACCTGACCTC 60.449 63.158 0.00 0.00 0.00 3.85
307 312 2.665000 CGCACCATGACCTGACCT 59.335 61.111 0.00 0.00 0.00 3.85
308 313 2.436646 CCGCACCATGACCTGACC 60.437 66.667 0.00 0.00 0.00 4.02
309 314 3.127533 GCCGCACCATGACCTGAC 61.128 66.667 0.00 0.00 0.00 3.51
310 315 1.621672 TATGCCGCACCATGACCTGA 61.622 55.000 0.00 0.00 0.00 3.86
311 316 1.153188 TATGCCGCACCATGACCTG 60.153 57.895 0.00 0.00 0.00 4.00
312 317 1.146930 CTATGCCGCACCATGACCT 59.853 57.895 0.00 0.00 0.00 3.85
313 318 0.105964 TACTATGCCGCACCATGACC 59.894 55.000 0.00 0.00 0.00 4.02
314 319 2.169832 ATACTATGCCGCACCATGAC 57.830 50.000 0.00 0.00 0.00 3.06
315 320 2.928801 AATACTATGCCGCACCATGA 57.071 45.000 0.00 0.00 0.00 3.07
316 321 3.988379 AAAATACTATGCCGCACCATG 57.012 42.857 0.00 0.00 0.00 3.66
334 339 4.714308 ACCATGACCTGACCTTTTCAAAAA 59.286 37.500 0.00 0.00 32.21 1.94
335 340 4.099266 CACCATGACCTGACCTTTTCAAAA 59.901 41.667 0.00 0.00 32.21 2.44
336 341 3.636300 CACCATGACCTGACCTTTTCAAA 59.364 43.478 0.00 0.00 32.21 2.69
337 342 3.221771 CACCATGACCTGACCTTTTCAA 58.778 45.455 0.00 0.00 32.21 2.69
338 343 2.862541 CACCATGACCTGACCTTTTCA 58.137 47.619 0.00 0.00 0.00 2.69
339 344 1.541588 GCACCATGACCTGACCTTTTC 59.458 52.381 0.00 0.00 0.00 2.29
340 345 1.620822 GCACCATGACCTGACCTTTT 58.379 50.000 0.00 0.00 0.00 2.27
341 346 0.606401 CGCACCATGACCTGACCTTT 60.606 55.000 0.00 0.00 0.00 3.11
342 347 1.003355 CGCACCATGACCTGACCTT 60.003 57.895 0.00 0.00 0.00 3.50
343 348 2.665000 CGCACCATGACCTGACCT 59.335 61.111 0.00 0.00 0.00 3.85
344 349 2.436646 CCGCACCATGACCTGACC 60.437 66.667 0.00 0.00 0.00 4.02
345 350 3.127533 GCCGCACCATGACCTGAC 61.128 66.667 0.00 0.00 0.00 3.51
346 351 1.621672 TATGCCGCACCATGACCTGA 61.622 55.000 0.00 0.00 0.00 3.86
347 352 1.153188 TATGCCGCACCATGACCTG 60.153 57.895 0.00 0.00 0.00 4.00
348 353 1.146930 CTATGCCGCACCATGACCT 59.853 57.895 0.00 0.00 0.00 3.85
349 354 0.105964 TACTATGCCGCACCATGACC 59.894 55.000 0.00 0.00 0.00 4.02
350 355 1.597663 GTTACTATGCCGCACCATGAC 59.402 52.381 0.00 0.00 0.00 3.06
351 356 1.474320 GGTTACTATGCCGCACCATGA 60.474 52.381 0.00 0.00 0.00 3.07
352 357 0.944386 GGTTACTATGCCGCACCATG 59.056 55.000 0.00 0.00 0.00 3.66
353 358 0.179029 GGGTTACTATGCCGCACCAT 60.179 55.000 0.00 0.00 0.00 3.55
354 359 1.222387 GGGTTACTATGCCGCACCA 59.778 57.895 0.00 0.00 0.00 4.17
355 360 0.532196 GAGGGTTACTATGCCGCACC 60.532 60.000 0.00 0.00 0.00 5.01
356 361 0.532196 GGAGGGTTACTATGCCGCAC 60.532 60.000 0.00 0.00 0.00 5.34
357 362 1.692173 GGGAGGGTTACTATGCCGCA 61.692 60.000 0.00 0.00 0.00 5.69
358 363 1.070957 GGGAGGGTTACTATGCCGC 59.929 63.158 0.00 0.00 0.00 6.53
359 364 1.752833 GGGGAGGGTTACTATGCCG 59.247 63.158 0.00 0.00 0.00 5.69
360 365 0.761702 TCGGGGAGGGTTACTATGCC 60.762 60.000 0.00 0.00 0.00 4.40
361 366 0.680061 CTCGGGGAGGGTTACTATGC 59.320 60.000 0.00 0.00 0.00 3.14
362 367 2.083628 ACTCGGGGAGGGTTACTATG 57.916 55.000 0.00 0.00 33.35 2.23
363 368 2.675583 GAACTCGGGGAGGGTTACTAT 58.324 52.381 0.00 0.00 45.13 2.12
364 369 1.342374 GGAACTCGGGGAGGGTTACTA 60.342 57.143 0.00 0.00 45.13 1.82
365 370 0.616964 GGAACTCGGGGAGGGTTACT 60.617 60.000 0.00 0.00 45.13 2.24
366 371 1.620739 GGGAACTCGGGGAGGGTTAC 61.621 65.000 0.00 0.00 45.13 2.50
367 372 1.306397 GGGAACTCGGGGAGGGTTA 60.306 63.158 0.00 0.00 45.13 2.85
369 374 2.782997 AATGGGAACTCGGGGAGGGT 62.783 60.000 0.00 0.00 33.35 4.34
370 375 2.001269 AATGGGAACTCGGGGAGGG 61.001 63.158 0.00 0.00 33.35 4.30
371 376 1.224592 CAATGGGAACTCGGGGAGG 59.775 63.158 0.00 0.00 33.35 4.30
372 377 0.328258 AACAATGGGAACTCGGGGAG 59.672 55.000 0.00 0.00 35.52 4.30
373 378 0.774908 AAACAATGGGAACTCGGGGA 59.225 50.000 0.00 0.00 0.00 4.81
374 379 1.627864 AAAACAATGGGAACTCGGGG 58.372 50.000 0.00 0.00 0.00 5.73
375 380 2.890945 AGAAAAACAATGGGAACTCGGG 59.109 45.455 0.00 0.00 0.00 5.14
376 381 4.584327 AAGAAAAACAATGGGAACTCGG 57.416 40.909 0.00 0.00 0.00 4.63
377 382 6.273071 AGAAAAGAAAAACAATGGGAACTCG 58.727 36.000 0.00 0.00 0.00 4.18
378 383 7.492524 AGAGAAAAGAAAAACAATGGGAACTC 58.507 34.615 0.00 0.00 0.00 3.01
379 384 7.343057 AGAGAGAAAAGAAAAACAATGGGAACT 59.657 33.333 0.00 0.00 0.00 3.01
380 385 7.492524 AGAGAGAAAAGAAAAACAATGGGAAC 58.507 34.615 0.00 0.00 0.00 3.62
381 386 7.561356 AGAGAGAGAAAAGAAAAACAATGGGAA 59.439 33.333 0.00 0.00 0.00 3.97
382 387 7.062957 AGAGAGAGAAAAGAAAAACAATGGGA 58.937 34.615 0.00 0.00 0.00 4.37
383 388 7.230309 AGAGAGAGAGAAAAGAAAAACAATGGG 59.770 37.037 0.00 0.00 0.00 4.00
384 389 8.164058 AGAGAGAGAGAAAAGAAAAACAATGG 57.836 34.615 0.00 0.00 0.00 3.16
394 399 8.132362 GCGACATATAAAGAGAGAGAGAAAAGA 58.868 37.037 0.00 0.00 0.00 2.52
395 400 7.381139 GGCGACATATAAAGAGAGAGAGAAAAG 59.619 40.741 0.00 0.00 0.00 2.27
396 401 7.068839 AGGCGACATATAAAGAGAGAGAGAAAA 59.931 37.037 0.00 0.00 0.00 2.29
397 402 6.547880 AGGCGACATATAAAGAGAGAGAGAAA 59.452 38.462 0.00 0.00 0.00 2.52
398 403 6.016693 CAGGCGACATATAAAGAGAGAGAGAA 60.017 42.308 0.00 0.00 0.00 2.87
399 404 5.471797 CAGGCGACATATAAAGAGAGAGAGA 59.528 44.000 0.00 0.00 0.00 3.10
400 405 5.698832 CAGGCGACATATAAAGAGAGAGAG 58.301 45.833 0.00 0.00 0.00 3.20
401 406 4.022762 GCAGGCGACATATAAAGAGAGAGA 60.023 45.833 0.00 0.00 0.00 3.10
402 407 4.233789 GCAGGCGACATATAAAGAGAGAG 58.766 47.826 0.00 0.00 0.00 3.20
403 408 3.636764 TGCAGGCGACATATAAAGAGAGA 59.363 43.478 0.00 0.00 0.00 3.10
404 409 3.982475 TGCAGGCGACATATAAAGAGAG 58.018 45.455 0.00 0.00 0.00 3.20
405 410 4.607293 ATGCAGGCGACATATAAAGAGA 57.393 40.909 0.00 0.00 0.00 3.10
406 411 5.446709 CAAATGCAGGCGACATATAAAGAG 58.553 41.667 0.00 0.00 0.00 2.85
407 412 4.275689 CCAAATGCAGGCGACATATAAAGA 59.724 41.667 0.00 0.00 0.00 2.52
408 413 4.539870 CCAAATGCAGGCGACATATAAAG 58.460 43.478 0.00 0.00 0.00 1.85
409 414 3.243367 GCCAAATGCAGGCGACATATAAA 60.243 43.478 0.00 0.00 43.15 1.40
410 415 2.293122 GCCAAATGCAGGCGACATATAA 59.707 45.455 0.00 0.00 43.15 0.98
411 416 1.879380 GCCAAATGCAGGCGACATATA 59.121 47.619 0.00 0.00 43.15 0.86
412 417 0.670162 GCCAAATGCAGGCGACATAT 59.330 50.000 0.00 0.00 43.15 1.78
413 418 2.105984 GCCAAATGCAGGCGACATA 58.894 52.632 0.00 0.00 43.15 2.29
414 419 2.887360 GCCAAATGCAGGCGACAT 59.113 55.556 0.00 0.00 43.15 3.06
420 425 1.712977 GAGCTCTCGCCAAATGCAGG 61.713 60.000 6.43 0.00 41.33 4.85
421 426 1.022982 TGAGCTCTCGCCAAATGCAG 61.023 55.000 16.19 0.00 41.33 4.41
422 427 1.003476 TGAGCTCTCGCCAAATGCA 60.003 52.632 16.19 0.00 41.33 3.96
423 428 1.712977 CCTGAGCTCTCGCCAAATGC 61.713 60.000 16.19 0.00 36.60 3.56
424 429 1.094073 CCCTGAGCTCTCGCCAAATG 61.094 60.000 16.19 0.00 36.60 2.32
425 430 1.222936 CCCTGAGCTCTCGCCAAAT 59.777 57.895 16.19 0.00 36.60 2.32
426 431 2.665000 CCCTGAGCTCTCGCCAAA 59.335 61.111 16.19 0.00 36.60 3.28
427 432 3.393970 CCCCTGAGCTCTCGCCAA 61.394 66.667 16.19 0.00 36.60 4.52
428 433 3.905153 TTCCCCTGAGCTCTCGCCA 62.905 63.158 16.19 0.00 36.60 5.69
429 434 3.077556 TTCCCCTGAGCTCTCGCC 61.078 66.667 16.19 0.00 36.60 5.54
430 435 2.185608 GTTCCCCTGAGCTCTCGC 59.814 66.667 16.19 0.00 0.00 5.03
431 436 1.254284 ACTGTTCCCCTGAGCTCTCG 61.254 60.000 16.19 5.95 0.00 4.04
432 437 0.248843 CACTGTTCCCCTGAGCTCTC 59.751 60.000 16.19 0.00 0.00 3.20
433 438 1.835927 GCACTGTTCCCCTGAGCTCT 61.836 60.000 16.19 0.00 0.00 4.09
434 439 1.376553 GCACTGTTCCCCTGAGCTC 60.377 63.158 6.82 6.82 0.00 4.09
498 503 2.549563 GCCACATGATCCTCATCGTGAT 60.550 50.000 10.49 0.00 45.69 3.06
506 511 0.464036 TACACGGCCACATGATCCTC 59.536 55.000 2.24 0.00 0.00 3.71
509 514 6.569780 TGTATATATACACGGCCACATGATC 58.430 40.000 19.51 0.00 38.28 2.92
539 553 5.642165 ACTCCCACGTATATAAGATGAGGT 58.358 41.667 2.47 0.00 0.00 3.85
552 566 4.468510 ACAATAAATCCAGACTCCCACGTA 59.531 41.667 0.00 0.00 0.00 3.57
553 567 3.263425 ACAATAAATCCAGACTCCCACGT 59.737 43.478 0.00 0.00 0.00 4.49
554 568 3.873910 ACAATAAATCCAGACTCCCACG 58.126 45.455 0.00 0.00 0.00 4.94
555 569 5.123936 GGTACAATAAATCCAGACTCCCAC 58.876 45.833 0.00 0.00 0.00 4.61
556 570 4.785914 TGGTACAATAAATCCAGACTCCCA 59.214 41.667 0.00 0.00 31.92 4.37
557 571 5.123936 GTGGTACAATAAATCCAGACTCCC 58.876 45.833 0.00 0.00 44.16 4.30
558 572 5.741011 TGTGGTACAATAAATCCAGACTCC 58.259 41.667 0.00 0.00 44.16 3.85
559 573 7.865706 ATTGTGGTACAATAAATCCAGACTC 57.134 36.000 5.45 0.00 46.11 3.36
582 596 9.799223 TGGGCTAGATAGAGGGTATAAAAATAT 57.201 33.333 0.00 0.00 0.00 1.28
583 597 9.799223 ATGGGCTAGATAGAGGGTATAAAAATA 57.201 33.333 0.00 0.00 0.00 1.40
584 598 8.701643 ATGGGCTAGATAGAGGGTATAAAAAT 57.298 34.615 0.00 0.00 0.00 1.82
585 599 8.520119 AATGGGCTAGATAGAGGGTATAAAAA 57.480 34.615 0.00 0.00 0.00 1.94
586 600 7.737607 TGAATGGGCTAGATAGAGGGTATAAAA 59.262 37.037 0.00 0.00 0.00 1.52
587 601 7.253421 TGAATGGGCTAGATAGAGGGTATAAA 58.747 38.462 0.00 0.00 0.00 1.40
588 602 6.811574 TGAATGGGCTAGATAGAGGGTATAA 58.188 40.000 0.00 0.00 0.00 0.98
589 603 6.010650 ACTGAATGGGCTAGATAGAGGGTATA 60.011 42.308 0.00 0.00 0.00 1.47
590 604 5.222652 ACTGAATGGGCTAGATAGAGGGTAT 60.223 44.000 0.00 0.00 0.00 2.73
591 605 4.108124 ACTGAATGGGCTAGATAGAGGGTA 59.892 45.833 0.00 0.00 0.00 3.69
592 606 3.116551 ACTGAATGGGCTAGATAGAGGGT 60.117 47.826 0.00 0.00 0.00 4.34
593 607 3.515562 ACTGAATGGGCTAGATAGAGGG 58.484 50.000 0.00 0.00 0.00 4.30
594 608 5.303971 CAAACTGAATGGGCTAGATAGAGG 58.696 45.833 0.00 0.00 0.00 3.69
595 609 4.754114 GCAAACTGAATGGGCTAGATAGAG 59.246 45.833 0.00 0.00 0.00 2.43
596 610 4.708177 GCAAACTGAATGGGCTAGATAGA 58.292 43.478 0.00 0.00 0.00 1.98
597 611 3.496130 CGCAAACTGAATGGGCTAGATAG 59.504 47.826 0.00 0.00 0.00 2.08
598 612 3.118408 ACGCAAACTGAATGGGCTAGATA 60.118 43.478 0.00 0.00 34.37 1.98
599 613 2.292267 CGCAAACTGAATGGGCTAGAT 58.708 47.619 0.00 0.00 0.00 1.98
600 614 1.003118 ACGCAAACTGAATGGGCTAGA 59.997 47.619 0.00 0.00 34.37 2.43
601 615 1.398390 GACGCAAACTGAATGGGCTAG 59.602 52.381 0.00 0.00 34.37 3.42
602 616 1.271108 TGACGCAAACTGAATGGGCTA 60.271 47.619 0.00 0.00 34.37 3.93
603 617 0.537143 TGACGCAAACTGAATGGGCT 60.537 50.000 0.00 0.00 34.37 5.19
604 618 0.109597 CTGACGCAAACTGAATGGGC 60.110 55.000 0.00 0.00 34.37 5.36
605 619 0.523072 CCTGACGCAAACTGAATGGG 59.477 55.000 0.00 0.00 36.84 4.00
606 620 1.466167 CTCCTGACGCAAACTGAATGG 59.534 52.381 0.00 0.00 0.00 3.16
607 621 2.096069 CACTCCTGACGCAAACTGAATG 60.096 50.000 0.00 0.00 0.00 2.67
608 622 2.146342 CACTCCTGACGCAAACTGAAT 58.854 47.619 0.00 0.00 0.00 2.57
609 623 1.581934 CACTCCTGACGCAAACTGAA 58.418 50.000 0.00 0.00 0.00 3.02
610 624 0.249868 CCACTCCTGACGCAAACTGA 60.250 55.000 0.00 0.00 0.00 3.41
611 625 0.532862 ACCACTCCTGACGCAAACTG 60.533 55.000 0.00 0.00 0.00 3.16
612 626 0.532862 CACCACTCCTGACGCAAACT 60.533 55.000 0.00 0.00 0.00 2.66
613 627 1.941812 CACCACTCCTGACGCAAAC 59.058 57.895 0.00 0.00 0.00 2.93
614 628 1.891919 GCACCACTCCTGACGCAAA 60.892 57.895 0.00 0.00 0.00 3.68
615 629 1.468506 TAGCACCACTCCTGACGCAA 61.469 55.000 0.00 0.00 0.00 4.85
616 630 1.257750 ATAGCACCACTCCTGACGCA 61.258 55.000 0.00 0.00 0.00 5.24
617 631 0.108138 AATAGCACCACTCCTGACGC 60.108 55.000 0.00 0.00 0.00 5.19
618 632 1.478510 AGAATAGCACCACTCCTGACG 59.521 52.381 0.00 0.00 0.00 4.35
619 633 3.618690 AAGAATAGCACCACTCCTGAC 57.381 47.619 0.00 0.00 0.00 3.51
620 634 8.170730 TCTATATAAGAATAGCACCACTCCTGA 58.829 37.037 0.00 0.00 30.79 3.86
621 635 8.354711 TCTATATAAGAATAGCACCACTCCTG 57.645 38.462 0.00 0.00 30.79 3.86
622 636 8.958060 TTCTATATAAGAATAGCACCACTCCT 57.042 34.615 0.00 0.00 39.36 3.69
623 637 9.026121 TCTTCTATATAAGAATAGCACCACTCC 57.974 37.037 0.00 0.00 43.32 3.85
644 658 8.531146 TGAAAGAAACAAAAAGGTGAATCTTCT 58.469 29.630 0.00 0.00 31.39 2.85
645 659 8.702163 TGAAAGAAACAAAAAGGTGAATCTTC 57.298 30.769 0.00 0.00 31.39 2.87
646 660 9.500785 TTTGAAAGAAACAAAAAGGTGAATCTT 57.499 25.926 0.00 0.00 34.89 2.40
647 661 8.935844 GTTTGAAAGAAACAAAAAGGTGAATCT 58.064 29.630 0.00 0.00 38.63 2.40
648 662 8.175069 GGTTTGAAAGAAACAAAAAGGTGAATC 58.825 33.333 0.00 0.00 38.63 2.52
649 663 7.663493 TGGTTTGAAAGAAACAAAAAGGTGAAT 59.337 29.630 0.00 0.00 38.63 2.57
650 664 6.992715 TGGTTTGAAAGAAACAAAAAGGTGAA 59.007 30.769 0.00 0.00 38.63 3.18
651 665 6.525629 TGGTTTGAAAGAAACAAAAAGGTGA 58.474 32.000 0.00 0.00 38.63 4.02
652 666 6.648725 TCTGGTTTGAAAGAAACAAAAAGGTG 59.351 34.615 0.00 0.00 38.63 4.00
653 667 6.764379 TCTGGTTTGAAAGAAACAAAAAGGT 58.236 32.000 0.00 0.00 38.63 3.50
654 668 7.096551 TCTCTGGTTTGAAAGAAACAAAAAGG 58.903 34.615 0.00 0.00 38.63 3.11
655 669 8.435430 GTTCTCTGGTTTGAAAGAAACAAAAAG 58.565 33.333 0.00 0.00 38.63 2.27
656 670 7.928706 TGTTCTCTGGTTTGAAAGAAACAAAAA 59.071 29.630 0.00 0.00 38.63 1.94
657 671 7.437748 TGTTCTCTGGTTTGAAAGAAACAAAA 58.562 30.769 0.00 0.00 38.63 2.44
658 672 6.987386 TGTTCTCTGGTTTGAAAGAAACAAA 58.013 32.000 0.00 0.00 35.34 2.83
659 673 6.582677 TGTTCTCTGGTTTGAAAGAAACAA 57.417 33.333 0.00 0.00 30.10 2.83
660 674 6.773976 ATGTTCTCTGGTTTGAAAGAAACA 57.226 33.333 0.00 0.00 32.85 2.83
661 675 7.759433 TCAAATGTTCTCTGGTTTGAAAGAAAC 59.241 33.333 0.00 0.00 37.56 2.78
662 676 7.759433 GTCAAATGTTCTCTGGTTTGAAAGAAA 59.241 33.333 1.46 0.00 40.85 2.52
663 677 7.257722 GTCAAATGTTCTCTGGTTTGAAAGAA 58.742 34.615 1.46 0.00 40.85 2.52
664 678 6.183360 GGTCAAATGTTCTCTGGTTTGAAAGA 60.183 38.462 1.46 0.00 40.85 2.52
665 679 5.979517 GGTCAAATGTTCTCTGGTTTGAAAG 59.020 40.000 1.46 0.00 40.85 2.62
666 680 5.656416 AGGTCAAATGTTCTCTGGTTTGAAA 59.344 36.000 1.46 0.00 40.85 2.69
667 681 5.200483 AGGTCAAATGTTCTCTGGTTTGAA 58.800 37.500 1.46 0.00 40.85 2.69
668 682 4.792068 AGGTCAAATGTTCTCTGGTTTGA 58.208 39.130 0.00 0.00 38.01 2.69
669 683 5.284079 CAAGGTCAAATGTTCTCTGGTTTG 58.716 41.667 0.00 0.00 33.91 2.93
670 684 4.202151 GCAAGGTCAAATGTTCTCTGGTTT 60.202 41.667 0.00 0.00 0.00 3.27
671 685 3.319122 GCAAGGTCAAATGTTCTCTGGTT 59.681 43.478 0.00 0.00 0.00 3.67
672 686 2.887152 GCAAGGTCAAATGTTCTCTGGT 59.113 45.455 0.00 0.00 0.00 4.00
673 687 2.886523 TGCAAGGTCAAATGTTCTCTGG 59.113 45.455 0.00 0.00 0.00 3.86
674 688 4.037208 AGTTGCAAGGTCAAATGTTCTCTG 59.963 41.667 0.00 0.00 0.00 3.35
675 689 4.210331 AGTTGCAAGGTCAAATGTTCTCT 58.790 39.130 0.00 0.00 0.00 3.10
676 690 4.574599 AGTTGCAAGGTCAAATGTTCTC 57.425 40.909 0.00 0.00 0.00 2.87
677 691 5.111293 CAAAGTTGCAAGGTCAAATGTTCT 58.889 37.500 0.00 0.00 0.00 3.01
678 692 5.393902 CAAAGTTGCAAGGTCAAATGTTC 57.606 39.130 0.00 0.00 0.00 3.18
692 706 4.943896 GTCTAGTCGACCTGCAAAGTTGC 61.944 52.174 13.01 9.11 44.33 4.17
693 707 2.731976 GTCTAGTCGACCTGCAAAGTTG 59.268 50.000 13.01 0.00 36.62 3.16
694 708 2.364324 TGTCTAGTCGACCTGCAAAGTT 59.636 45.455 13.01 0.00 42.13 2.66
695 709 1.961394 TGTCTAGTCGACCTGCAAAGT 59.039 47.619 13.01 0.00 42.13 2.66
696 710 2.288213 TGTGTCTAGTCGACCTGCAAAG 60.288 50.000 13.01 0.82 42.13 2.77
697 711 1.684450 TGTGTCTAGTCGACCTGCAAA 59.316 47.619 13.01 0.00 42.13 3.68
698 712 1.324383 TGTGTCTAGTCGACCTGCAA 58.676 50.000 13.01 0.00 42.13 4.08
699 713 1.000607 GTTGTGTCTAGTCGACCTGCA 60.001 52.381 13.01 3.75 42.13 4.41
700 714 1.269998 AGTTGTGTCTAGTCGACCTGC 59.730 52.381 13.01 0.89 42.13 4.85
701 715 2.922758 GCAGTTGTGTCTAGTCGACCTG 60.923 54.545 13.01 9.90 42.13 4.00
702 716 1.269998 GCAGTTGTGTCTAGTCGACCT 59.730 52.381 13.01 2.17 42.13 3.85
703 717 1.669211 GGCAGTTGTGTCTAGTCGACC 60.669 57.143 13.01 0.00 42.13 4.79
704 718 1.000607 TGGCAGTTGTGTCTAGTCGAC 60.001 52.381 7.70 7.70 43.14 4.20
705 719 1.000607 GTGGCAGTTGTGTCTAGTCGA 60.001 52.381 0.00 0.00 0.00 4.20
706 720 1.000163 AGTGGCAGTTGTGTCTAGTCG 60.000 52.381 0.00 0.00 0.00 4.18
707 721 2.678324 GAGTGGCAGTTGTGTCTAGTC 58.322 52.381 0.00 0.00 0.00 2.59
708 722 1.000163 CGAGTGGCAGTTGTGTCTAGT 60.000 52.381 0.00 0.00 0.00 2.57
709 723 1.000163 ACGAGTGGCAGTTGTGTCTAG 60.000 52.381 14.44 0.00 0.00 2.43
710 724 1.037493 ACGAGTGGCAGTTGTGTCTA 58.963 50.000 14.44 0.00 0.00 2.59
711 725 0.178068 AACGAGTGGCAGTTGTGTCT 59.822 50.000 15.84 0.00 0.00 3.41
712 726 0.304705 CAACGAGTGGCAGTTGTGTC 59.695 55.000 15.84 0.00 41.82 3.67
713 727 2.393557 CAACGAGTGGCAGTTGTGT 58.606 52.632 15.84 3.17 41.82 3.72
717 731 5.472137 ACATTTTATACAACGAGTGGCAGTT 59.528 36.000 0.00 0.00 0.00 3.16
718 732 5.001232 ACATTTTATACAACGAGTGGCAGT 58.999 37.500 0.00 0.00 0.00 4.40
719 733 5.545658 ACATTTTATACAACGAGTGGCAG 57.454 39.130 0.00 0.00 0.00 4.85
720 734 5.950758 AACATTTTATACAACGAGTGGCA 57.049 34.783 0.00 0.00 0.00 4.92
721 735 5.798434 GGAAACATTTTATACAACGAGTGGC 59.202 40.000 0.00 0.00 0.00 5.01
722 736 6.904498 TGGAAACATTTTATACAACGAGTGG 58.096 36.000 0.00 0.00 33.40 4.00
723 737 8.964420 ATTGGAAACATTTTATACAACGAGTG 57.036 30.769 0.00 0.00 42.32 3.51
724 738 9.974980 AAATTGGAAACATTTTATACAACGAGT 57.025 25.926 0.00 0.00 40.91 4.18
814 831 3.358118 ACTACTACTGTTGCCTCTCCTC 58.642 50.000 0.00 0.00 0.00 3.71
829 846 4.895889 AGCAGATCCATGTTGCTACTACTA 59.104 41.667 4.69 0.00 45.67 1.82
840 857 1.126488 ACCGATGAGCAGATCCATGT 58.874 50.000 0.00 0.00 0.00 3.21
876 893 3.533547 CCGTCCGGTTAAACATATCCAA 58.466 45.455 0.00 0.00 0.00 3.53
934 951 4.221482 CCCACCCTTCTTATATACCCGTAC 59.779 50.000 0.00 0.00 0.00 3.67
1017 1034 1.037030 GCGGCTGGGATTGGAAATGA 61.037 55.000 0.00 0.00 0.00 2.57
1074 1091 2.097825 GCCATGGCAAAGATGAGAACT 58.902 47.619 32.08 0.00 41.49 3.01
1095 1112 1.719063 AACCCCCTTGAGCTTCAGCA 61.719 55.000 0.75 0.00 45.16 4.41
1132 1149 0.106894 GGGAAGGGGATGTCGATGTC 59.893 60.000 0.00 0.00 0.00 3.06
1267 1286 4.457496 ACCGGATGGCGAGCTGTG 62.457 66.667 9.46 0.00 39.70 3.66
1288 1307 1.194781 ACCAGCCAGGACGACTCAAT 61.195 55.000 0.00 0.00 41.22 2.57
1338 1393 2.551270 GCAAACACTCGTGCCTCG 59.449 61.111 0.00 0.00 41.41 4.63
1420 1475 2.436646 AAATCGCGTGCCCAGGAG 60.437 61.111 5.77 0.00 0.00 3.69
1492 1555 4.156922 AGGAGTAGACATGAAAGACAGTCG 59.843 45.833 0.00 0.00 34.41 4.18
1693 1777 2.301870 TGTACCATGACTTCTCCACCAC 59.698 50.000 0.00 0.00 0.00 4.16
1716 1800 4.385865 CCCTCTAGATCCGCCATAGAGTAT 60.386 50.000 12.49 0.00 40.52 2.12
1890 1974 1.933021 TGTAGCCAGGGGTATATCCG 58.067 55.000 0.00 0.00 37.00 4.18
1899 1983 0.254178 ACTTGCAGATGTAGCCAGGG 59.746 55.000 0.00 0.00 0.00 4.45
2106 2215 0.749049 GCATGGATTTTGGAGGAGGC 59.251 55.000 0.00 0.00 0.00 4.70
2197 2309 2.935481 CAGGTTCCCCCTCTGCCA 60.935 66.667 0.00 0.00 43.86 4.92
2274 2396 2.813754 GCAACAGCAGGACACATCTTAA 59.186 45.455 0.00 0.00 0.00 1.85
2279 2401 1.151221 TGGCAACAGCAGGACACAT 59.849 52.632 0.00 0.00 46.17 3.21
2280 2402 2.594536 TGGCAACAGCAGGACACA 59.405 55.556 0.00 0.00 46.17 3.72
2309 2655 9.045223 GCTTGTCATACATGTGTTTCTATGATA 57.955 33.333 9.11 4.05 0.00 2.15
2599 4909 8.523658 AGAACTTAATTATTTTGGAACAGAGGC 58.476 33.333 0.00 0.00 42.39 4.70
2743 5054 7.581213 AATGTGTGAAGATCTACAAAACCAA 57.419 32.000 0.00 0.00 0.00 3.67
2809 5121 7.427989 TGTACTCCCTCCGTTCTAAAATAAT 57.572 36.000 0.00 0.00 0.00 1.28
2821 5133 3.297736 AGGAAAGTATGTACTCCCTCCG 58.702 50.000 7.75 0.00 35.90 4.63
3225 5600 6.317391 CACCAAAGCAACCTTTTCCAATTAAA 59.683 34.615 0.00 0.00 39.20 1.52
3669 6044 3.503363 TGATTGATGCAGTGTGTTCCTTC 59.497 43.478 0.00 0.00 0.00 3.46
3753 6128 4.202070 ACAACCCCAAAACTGTAAACATCG 60.202 41.667 0.00 0.00 0.00 3.84
4106 6482 4.320935 GCCACCTTCAAAACACGATTACAT 60.321 41.667 0.00 0.00 0.00 2.29
4112 6488 1.440938 CGGCCACCTTCAAAACACGA 61.441 55.000 2.24 0.00 0.00 4.35
4129 6505 0.447801 GGCAGCATACAAACAGTCGG 59.552 55.000 0.00 0.00 0.00 4.79
4133 6509 3.648339 ACAAAGGCAGCATACAAACAG 57.352 42.857 0.00 0.00 0.00 3.16
4211 6587 4.895224 ACATACTCTGCAAGCAATGATG 57.105 40.909 10.45 7.55 0.00 3.07
4271 6647 4.104831 AGTGAGGGCAGAAAGTAGGTTAT 58.895 43.478 0.00 0.00 0.00 1.89
4305 6681 5.182001 CACTTCTTAGTAAACAGCAGCCAAT 59.818 40.000 0.00 0.00 31.96 3.16
4322 6698 3.288092 GGGCGGGAATTAATCACTTCTT 58.712 45.455 0.00 0.00 0.00 2.52
4332 6708 2.746279 AACATCATGGGCGGGAATTA 57.254 45.000 0.00 0.00 0.00 1.40
4336 6712 1.202879 GGAATAACATCATGGGCGGGA 60.203 52.381 0.00 0.00 0.00 5.14
4340 6716 7.112452 AGTTTAAAGGAATAACATCATGGGC 57.888 36.000 0.00 0.00 0.00 5.36
4443 6819 9.388506 GATCTCAAAAGATTTTATGTCTGGAGA 57.611 33.333 0.00 0.00 42.46 3.71
4457 6833 8.105829 GGTCCACCATATATGATCTCAAAAGAT 58.894 37.037 14.54 0.00 39.39 2.40
4470 6846 6.131972 CCTTCATCAAGGTCCACCATATAT 57.868 41.667 0.00 0.00 44.11 0.86
4514 6890 7.256190 CCCCGAGATGAAAGGTATTATCTTGTA 60.256 40.741 0.00 0.00 31.85 2.41
4515 6891 6.464465 CCCCGAGATGAAAGGTATTATCTTGT 60.464 42.308 0.00 0.00 31.85 3.16
4516 6892 5.934625 CCCCGAGATGAAAGGTATTATCTTG 59.065 44.000 0.00 0.00 33.01 3.02
4517 6893 5.844516 TCCCCGAGATGAAAGGTATTATCTT 59.155 40.000 0.00 0.00 30.49 2.40
4518 6894 5.403512 TCCCCGAGATGAAAGGTATTATCT 58.596 41.667 0.00 0.00 32.87 1.98
4580 6956 9.902684 TCCATTTGATGCATTTTTGGTAAATAT 57.097 25.926 0.00 0.00 0.00 1.28
4587 6963 6.995511 ATCTTCCATTTGATGCATTTTTGG 57.004 33.333 0.00 6.61 0.00 3.28
4597 6973 8.465201 GCTTTTCTCTGTAATCTTCCATTTGAT 58.535 33.333 0.00 0.00 0.00 2.57
4598 6974 7.094205 GGCTTTTCTCTGTAATCTTCCATTTGA 60.094 37.037 0.00 0.00 0.00 2.69
4601 6977 6.248433 TGGCTTTTCTCTGTAATCTTCCATT 58.752 36.000 0.00 0.00 0.00 3.16
4602 6978 5.819991 TGGCTTTTCTCTGTAATCTTCCAT 58.180 37.500 0.00 0.00 0.00 3.41
4603 6979 5.241403 TGGCTTTTCTCTGTAATCTTCCA 57.759 39.130 0.00 0.00 0.00 3.53
4604 6980 6.765915 ATTGGCTTTTCTCTGTAATCTTCC 57.234 37.500 0.00 0.00 0.00 3.46
4605 6981 8.608317 GTCTATTGGCTTTTCTCTGTAATCTTC 58.392 37.037 0.00 0.00 0.00 2.87
4606 6982 7.554476 GGTCTATTGGCTTTTCTCTGTAATCTT 59.446 37.037 0.00 0.00 0.00 2.40
4607 6983 7.051000 GGTCTATTGGCTTTTCTCTGTAATCT 58.949 38.462 0.00 0.00 0.00 2.40
4715 7093 1.281419 TTTCACGGGCTGGGATTAGA 58.719 50.000 0.00 0.00 0.00 2.10
4723 7101 2.122783 TAAGGGATTTTCACGGGCTG 57.877 50.000 0.00 0.00 0.00 4.85
4736 7114 3.650942 ACATCAACAGACTGGTTAAGGGA 59.349 43.478 7.51 0.00 0.00 4.20
4738 7116 4.631813 GCTACATCAACAGACTGGTTAAGG 59.368 45.833 7.51 0.00 0.00 2.69
4739 7117 5.237815 TGCTACATCAACAGACTGGTTAAG 58.762 41.667 7.51 0.00 0.00 1.85
4740 7118 5.222079 TGCTACATCAACAGACTGGTTAA 57.778 39.130 7.51 0.00 0.00 2.01
4741 7119 4.882842 TGCTACATCAACAGACTGGTTA 57.117 40.909 7.51 0.00 0.00 2.85
4742 7120 3.769739 TGCTACATCAACAGACTGGTT 57.230 42.857 7.51 0.00 0.00 3.67
4743 7121 3.603532 CATGCTACATCAACAGACTGGT 58.396 45.455 7.51 0.00 0.00 4.00
4744 7122 2.941064 CCATGCTACATCAACAGACTGG 59.059 50.000 7.51 0.00 0.00 4.00
4745 7123 3.603532 ACCATGCTACATCAACAGACTG 58.396 45.455 0.00 0.00 0.00 3.51
4746 7124 3.988976 ACCATGCTACATCAACAGACT 57.011 42.857 0.00 0.00 0.00 3.24
4747 7125 3.062639 CGAACCATGCTACATCAACAGAC 59.937 47.826 0.00 0.00 0.00 3.51
4750 7128 1.737236 GCGAACCATGCTACATCAACA 59.263 47.619 0.00 0.00 0.00 3.33
4751 7129 1.737236 TGCGAACCATGCTACATCAAC 59.263 47.619 0.00 0.00 0.00 3.18
4752 7130 2.106477 TGCGAACCATGCTACATCAA 57.894 45.000 0.00 0.00 0.00 2.57
4753 7131 2.330440 ATGCGAACCATGCTACATCA 57.670 45.000 0.00 0.00 31.48 3.07
4754 7132 5.362556 AAATATGCGAACCATGCTACATC 57.637 39.130 0.00 0.00 35.34 3.06
4755 7133 7.606073 TGTATAAATATGCGAACCATGCTACAT 59.394 33.333 0.00 0.00 35.34 2.29
4756 7134 6.931840 TGTATAAATATGCGAACCATGCTACA 59.068 34.615 0.00 0.00 35.34 2.74
4757 7135 7.359262 TGTATAAATATGCGAACCATGCTAC 57.641 36.000 0.00 0.00 35.34 3.58
4758 7136 9.093970 GTATGTATAAATATGCGAACCATGCTA 57.906 33.333 0.00 0.00 35.34 3.49
4759 7137 7.606073 TGTATGTATAAATATGCGAACCATGCT 59.394 33.333 0.00 0.00 35.34 3.79
4760 7138 7.692291 GTGTATGTATAAATATGCGAACCATGC 59.308 37.037 0.00 0.00 35.34 4.06
4761 7139 8.935844 AGTGTATGTATAAATATGCGAACCATG 58.064 33.333 0.00 0.00 35.34 3.66
4763 7141 9.984190 TTAGTGTATGTATAAATATGCGAACCA 57.016 29.630 0.00 0.00 0.00 3.67
4799 9531 6.176183 CCTTCTCTCTACAATTGGTTGACAT 58.824 40.000 10.83 0.00 38.71 3.06
4815 9547 3.452627 TCCAATAGCTTCCACCTTCTCTC 59.547 47.826 0.00 0.00 0.00 3.20
4881 9613 6.621737 TTAAACTTGCTACTATTGTCGTCG 57.378 37.500 0.00 0.00 0.00 5.12
4884 9616 9.607285 ACAAAATTAAACTTGCTACTATTGTCG 57.393 29.630 0.96 0.00 0.00 4.35
4892 9624 5.538118 AGGGCACAAAATTAAACTTGCTAC 58.462 37.500 0.00 0.00 0.00 3.58
4926 9658 4.177026 ACTTTGTCTAGTATGCTCTTGCG 58.823 43.478 0.00 0.00 43.34 4.85
4941 9673 8.867112 TTCCGTGTTCATAGATATACTTTGTC 57.133 34.615 0.00 0.00 0.00 3.18
4989 9721 1.894699 ATTCACCCCTCTCCCCTTAC 58.105 55.000 0.00 0.00 0.00 2.34
4995 9727 6.201591 AGATATGATCTATTCACCCCTCTCC 58.798 44.000 0.00 0.00 38.00 3.71
4997 9729 7.251936 TGAAGATATGATCTATTCACCCCTCT 58.748 38.462 0.00 0.00 39.08 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.