Multiple sequence alignment - TraesCS6B01G055200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G055200 chr6B 100.000 3116 0 0 1 3116 35597550 35594435 0.000000e+00 5755.0
1 TraesCS6B01G055200 chr6B 78.032 1179 225 25 948 2108 64318643 64319805 0.000000e+00 712.0
2 TraesCS6B01G055200 chr6B 97.576 330 8 0 28 357 35603873 35603544 1.620000e-157 566.0
3 TraesCS6B01G055200 chr6B 91.798 317 15 6 2273 2586 35595107 35594799 6.170000e-117 431.0
4 TraesCS6B01G055200 chr6B 91.798 317 15 6 2444 2752 35595278 35594965 6.170000e-117 431.0
5 TraesCS6B01G055200 chr6B 79.755 326 60 5 998 1320 27992367 27992045 6.720000e-57 231.0
6 TraesCS6B01G055200 chr6B 90.196 153 12 2 2265 2414 35594951 35594799 2.450000e-46 196.0
7 TraesCS6B01G055200 chr6B 90.196 153 12 2 2600 2752 35595286 35595137 2.450000e-46 196.0
8 TraesCS6B01G055200 chr6A 93.302 1702 73 17 909 2586 20864176 20862492 0.000000e+00 2473.0
9 TraesCS6B01G055200 chr6A 78.390 1180 220 24 948 2108 35110437 35111600 0.000000e+00 734.0
10 TraesCS6B01G055200 chr6A 91.853 491 27 7 2406 2896 20862826 20862349 0.000000e+00 673.0
11 TraesCS6B01G055200 chr6A 86.441 413 31 12 499 909 20864602 20864213 2.220000e-116 429.0
12 TraesCS6B01G055200 chr6A 86.864 236 18 6 2894 3116 20862258 20862023 5.160000e-63 252.0
13 TraesCS6B01G055200 chr6A 80.615 325 59 3 998 1320 16531309 16531631 6.670000e-62 248.0
14 TraesCS6B01G055200 chr6A 90.960 177 9 4 2578 2752 20862826 20862655 6.720000e-57 231.0
15 TraesCS6B01G055200 chr6A 90.196 153 9 3 2265 2414 20862641 20862492 8.820000e-46 195.0
16 TraesCS6B01G055200 chr6D 93.134 1238 49 12 1257 2469 20726527 20725301 0.000000e+00 1783.0
17 TraesCS6B01G055200 chr6D 94.154 325 15 1 909 1229 20726846 20726522 2.790000e-135 492.0
18 TraesCS6B01G055200 chr6D 73.615 1137 239 39 998 2106 16242978 16244081 6.310000e-102 381.0
19 TraesCS6B01G055200 chr6D 92.174 230 11 6 2406 2635 20725521 20725299 5.010000e-83 318.0
20 TraesCS6B01G055200 chr6D 92.262 168 12 1 2578 2744 20725521 20725354 1.440000e-58 237.0
21 TraesCS6B01G055200 chr6D 92.405 79 6 0 3038 3116 20725296 20725218 2.540000e-21 113.0
22 TraesCS6B01G055200 chr6D 97.222 36 1 0 2265 2300 20725334 20725299 9.330000e-06 62.1
23 TraesCS6B01G055200 chrUn 79.220 1179 211 21 948 2108 103104209 103105371 0.000000e+00 789.0
24 TraesCS6B01G055200 chr5B 96.359 357 13 0 1 357 176491532 176491888 3.460000e-164 588.0
25 TraesCS6B01G055200 chr5B 95.870 339 14 0 1 339 176472378 176472716 1.630000e-152 549.0
26 TraesCS6B01G055200 chr1A 74.297 1245 263 39 950 2173 130890509 130891717 1.010000e-129 473.0
27 TraesCS6B01G055200 chr1A 81.319 182 22 9 547 728 130889724 130889893 1.510000e-28 137.0
28 TraesCS6B01G055200 chr1A 87.500 48 6 0 698 745 130889955 130890002 4.340000e-04 56.5
29 TraesCS6B01G055200 chr7D 86.944 360 40 5 1 357 332137456 332137811 6.260000e-107 398.0
30 TraesCS6B01G055200 chr7D 86.389 360 37 6 1 357 332169175 332169525 1.750000e-102 383.0
31 TraesCS6B01G055200 chr1B 86.944 360 40 4 1 357 653325427 653325072 6.260000e-107 398.0
32 TraesCS6B01G055200 chr4B 85.833 360 48 2 1 357 337453072 337453431 2.270000e-101 379.0
33 TraesCS6B01G055200 chr4B 85.399 363 50 2 1 360 337459321 337459683 1.060000e-99 374.0
34 TraesCS6B01G055200 chr3D 85.042 361 49 4 1 357 266961889 266962248 2.280000e-96 363.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G055200 chr6B 35594435 35597550 3115 True 1401.800000 5755 92.797600 1 3116 5 chr6B.!!$R3 3115
1 TraesCS6B01G055200 chr6B 64318643 64319805 1162 False 712.000000 712 78.032000 948 2108 1 chr6B.!!$F1 1160
2 TraesCS6B01G055200 chr6A 35110437 35111600 1163 False 734.000000 734 78.390000 948 2108 1 chr6A.!!$F2 1160
3 TraesCS6B01G055200 chr6A 20862023 20864602 2579 True 708.833333 2473 89.936000 499 3116 6 chr6A.!!$R1 2617
4 TraesCS6B01G055200 chr6D 20725218 20726846 1628 True 500.850000 1783 93.558500 909 3116 6 chr6D.!!$R1 2207
5 TraesCS6B01G055200 chr6D 16242978 16244081 1103 False 381.000000 381 73.615000 998 2106 1 chr6D.!!$F1 1108
6 TraesCS6B01G055200 chrUn 103104209 103105371 1162 False 789.000000 789 79.220000 948 2108 1 chrUn.!!$F1 1160
7 TraesCS6B01G055200 chr1A 130889724 130891717 1993 False 222.166667 473 81.038667 547 2173 3 chr1A.!!$F1 1626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
102 103 0.038251 TCGCACGTCTTCATGCTTCT 60.038 50.0 0.00 0.0 39.79 2.85 F
418 419 0.039437 TCGTTCTCTCGTTCTGCCAC 60.039 55.0 0.00 0.0 0.00 5.01 F
429 430 0.111061 TTCTGCCACATCAGCCTGTT 59.889 50.0 0.00 0.0 34.19 3.16 F
788 924 0.465287 TCTCGAAGGCTGCATGCATA 59.535 50.0 22.97 0.0 45.15 3.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1359 1757 1.282248 CGTTGATGGCGTCGTCTGTT 61.282 55.000 11.10 0.00 0.00 3.16 R
1521 1934 1.299620 CAACGACGTCAGGTTCCGT 60.300 57.895 17.16 3.09 40.54 4.69 R
2051 2475 1.681327 ACTGGGTATGACGCGTCCT 60.681 57.895 34.34 27.40 33.25 3.85 R
2452 2897 5.195001 TCTTTCCTTATTTGGTGTTGTGC 57.805 39.130 0.00 0.00 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 2.671682 GGACTTGGTCCCTCCAGC 59.328 66.667 5.48 0.00 46.19 4.85
56 57 3.316573 GGACTTGGTCCCTCCAGCG 62.317 68.421 5.48 0.00 46.19 5.18
61 62 4.475135 GGTCCCTCCAGCGGCTTC 62.475 72.222 0.00 0.00 35.97 3.86
62 63 4.821589 GTCCCTCCAGCGGCTTCG 62.822 72.222 0.00 0.00 0.00 3.79
65 66 4.379243 CCTCCAGCGGCTTCGTGT 62.379 66.667 0.00 0.00 36.07 4.49
66 67 2.811317 CTCCAGCGGCTTCGTGTC 60.811 66.667 0.00 0.00 36.07 3.67
67 68 4.373116 TCCAGCGGCTTCGTGTCC 62.373 66.667 0.00 0.00 36.07 4.02
72 73 4.367023 CGGCTTCGTGTCCGGGAA 62.367 66.667 0.00 0.00 41.82 3.97
73 74 2.741211 GGCTTCGTGTCCGGGAAC 60.741 66.667 0.00 0.00 33.95 3.62
74 75 2.342648 GCTTCGTGTCCGGGAACT 59.657 61.111 0.00 0.00 33.95 3.01
75 76 1.737008 GCTTCGTGTCCGGGAACTC 60.737 63.158 0.00 0.00 33.95 3.01
76 77 1.080025 CTTCGTGTCCGGGAACTCC 60.080 63.158 0.00 0.00 33.95 3.85
77 78 1.812686 CTTCGTGTCCGGGAACTCCA 61.813 60.000 0.00 0.00 37.91 3.86
78 79 1.189524 TTCGTGTCCGGGAACTCCAT 61.190 55.000 0.00 0.00 37.91 3.41
79 80 1.153628 CGTGTCCGGGAACTCCATC 60.154 63.158 0.00 0.00 37.91 3.51
80 81 1.605058 CGTGTCCGGGAACTCCATCT 61.605 60.000 0.00 0.00 37.91 2.90
81 82 0.175989 GTGTCCGGGAACTCCATCTC 59.824 60.000 0.00 0.00 37.91 2.75
82 83 0.976073 TGTCCGGGAACTCCATCTCC 60.976 60.000 0.00 0.00 37.91 3.71
83 84 0.688087 GTCCGGGAACTCCATCTCCT 60.688 60.000 0.00 0.00 37.91 3.69
84 85 0.397254 TCCGGGAACTCCATCTCCTC 60.397 60.000 0.00 0.00 37.91 3.71
85 86 1.736586 CGGGAACTCCATCTCCTCG 59.263 63.158 0.00 0.00 37.91 4.63
86 87 1.443828 GGGAACTCCATCTCCTCGC 59.556 63.158 0.00 0.00 37.91 5.03
87 88 1.330655 GGGAACTCCATCTCCTCGCA 61.331 60.000 0.00 0.00 37.91 5.10
88 89 0.179097 GGAACTCCATCTCCTCGCAC 60.179 60.000 0.00 0.00 35.64 5.34
89 90 0.526524 GAACTCCATCTCCTCGCACG 60.527 60.000 0.00 0.00 0.00 5.34
90 91 1.251527 AACTCCATCTCCTCGCACGT 61.252 55.000 0.00 0.00 0.00 4.49
91 92 1.064946 CTCCATCTCCTCGCACGTC 59.935 63.158 0.00 0.00 0.00 4.34
92 93 1.378646 TCCATCTCCTCGCACGTCT 60.379 57.895 0.00 0.00 0.00 4.18
93 94 0.965866 TCCATCTCCTCGCACGTCTT 60.966 55.000 0.00 0.00 0.00 3.01
94 95 0.526524 CCATCTCCTCGCACGTCTTC 60.527 60.000 0.00 0.00 0.00 2.87
95 96 0.171231 CATCTCCTCGCACGTCTTCA 59.829 55.000 0.00 0.00 0.00 3.02
96 97 1.107114 ATCTCCTCGCACGTCTTCAT 58.893 50.000 0.00 0.00 0.00 2.57
97 98 0.171231 TCTCCTCGCACGTCTTCATG 59.829 55.000 0.00 0.00 0.00 3.07
98 99 1.416813 CTCCTCGCACGTCTTCATGC 61.417 60.000 0.00 0.00 38.52 4.06
99 100 1.446792 CCTCGCACGTCTTCATGCT 60.447 57.895 0.00 0.00 39.79 3.79
100 101 1.016130 CCTCGCACGTCTTCATGCTT 61.016 55.000 0.00 0.00 39.79 3.91
101 102 0.368227 CTCGCACGTCTTCATGCTTC 59.632 55.000 0.00 0.00 39.79 3.86
102 103 0.038251 TCGCACGTCTTCATGCTTCT 60.038 50.000 0.00 0.00 39.79 2.85
103 104 0.368227 CGCACGTCTTCATGCTTCTC 59.632 55.000 0.00 0.00 39.79 2.87
104 105 0.723981 GCACGTCTTCATGCTTCTCC 59.276 55.000 0.00 0.00 38.84 3.71
105 106 1.674221 GCACGTCTTCATGCTTCTCCT 60.674 52.381 0.00 0.00 38.84 3.69
106 107 2.693069 CACGTCTTCATGCTTCTCCTT 58.307 47.619 0.00 0.00 0.00 3.36
107 108 2.670414 CACGTCTTCATGCTTCTCCTTC 59.330 50.000 0.00 0.00 0.00 3.46
108 109 2.564947 ACGTCTTCATGCTTCTCCTTCT 59.435 45.455 0.00 0.00 0.00 2.85
109 110 3.007398 ACGTCTTCATGCTTCTCCTTCTT 59.993 43.478 0.00 0.00 0.00 2.52
110 111 3.616379 CGTCTTCATGCTTCTCCTTCTTC 59.384 47.826 0.00 0.00 0.00 2.87
111 112 4.620332 CGTCTTCATGCTTCTCCTTCTTCT 60.620 45.833 0.00 0.00 0.00 2.85
112 113 5.244755 GTCTTCATGCTTCTCCTTCTTCTT 58.755 41.667 0.00 0.00 0.00 2.52
113 114 5.122082 GTCTTCATGCTTCTCCTTCTTCTTG 59.878 44.000 0.00 0.00 0.00 3.02
114 115 3.947868 TCATGCTTCTCCTTCTTCTTGG 58.052 45.455 0.00 0.00 0.00 3.61
115 116 2.867109 TGCTTCTCCTTCTTCTTGGG 57.133 50.000 0.00 0.00 0.00 4.12
116 117 2.057922 TGCTTCTCCTTCTTCTTGGGT 58.942 47.619 0.00 0.00 0.00 4.51
117 118 2.039084 TGCTTCTCCTTCTTCTTGGGTC 59.961 50.000 0.00 0.00 0.00 4.46
118 119 2.304470 GCTTCTCCTTCTTCTTGGGTCT 59.696 50.000 0.00 0.00 0.00 3.85
119 120 3.618752 GCTTCTCCTTCTTCTTGGGTCTC 60.619 52.174 0.00 0.00 0.00 3.36
120 121 2.541466 TCTCCTTCTTCTTGGGTCTCC 58.459 52.381 0.00 0.00 0.00 3.71
121 122 1.205893 CTCCTTCTTCTTGGGTCTCCG 59.794 57.143 0.00 0.00 35.24 4.63
122 123 0.250513 CCTTCTTCTTGGGTCTCCGG 59.749 60.000 0.00 0.00 35.24 5.14
123 124 0.977395 CTTCTTCTTGGGTCTCCGGT 59.023 55.000 0.00 0.00 35.24 5.28
124 125 0.685097 TTCTTCTTGGGTCTCCGGTG 59.315 55.000 0.00 0.00 35.24 4.94
125 126 0.178944 TCTTCTTGGGTCTCCGGTGA 60.179 55.000 0.00 0.06 35.24 4.02
126 127 0.685097 CTTCTTGGGTCTCCGGTGAA 59.315 55.000 7.99 0.00 35.24 3.18
127 128 0.395312 TTCTTGGGTCTCCGGTGAAC 59.605 55.000 13.25 13.25 35.24 3.18
128 129 0.471211 TCTTGGGTCTCCGGTGAACT 60.471 55.000 20.27 0.00 35.24 3.01
129 130 0.396811 CTTGGGTCTCCGGTGAACTT 59.603 55.000 20.27 0.00 35.24 2.66
130 131 0.107831 TTGGGTCTCCGGTGAACTTG 59.892 55.000 20.27 0.00 35.24 3.16
131 132 1.003718 GGGTCTCCGGTGAACTTGG 60.004 63.158 20.27 0.00 0.00 3.61
132 133 1.752833 GGTCTCCGGTGAACTTGGT 59.247 57.895 14.32 0.00 0.00 3.67
133 134 0.602905 GGTCTCCGGTGAACTTGGTG 60.603 60.000 14.32 0.00 0.00 4.17
134 135 0.391597 GTCTCCGGTGAACTTGGTGA 59.608 55.000 7.99 0.00 0.00 4.02
135 136 1.002087 GTCTCCGGTGAACTTGGTGAT 59.998 52.381 7.99 0.00 0.00 3.06
136 137 1.275291 TCTCCGGTGAACTTGGTGATC 59.725 52.381 3.14 0.00 0.00 2.92
137 138 0.323629 TCCGGTGAACTTGGTGATCC 59.676 55.000 0.00 0.00 0.00 3.36
138 139 0.676782 CCGGTGAACTTGGTGATCCC 60.677 60.000 0.00 0.00 0.00 3.85
139 140 0.324943 CGGTGAACTTGGTGATCCCT 59.675 55.000 0.00 0.00 0.00 4.20
140 141 1.676014 CGGTGAACTTGGTGATCCCTC 60.676 57.143 0.00 0.00 0.00 4.30
141 142 1.340114 GGTGAACTTGGTGATCCCTCC 60.340 57.143 0.00 0.00 0.00 4.30
142 143 0.613260 TGAACTTGGTGATCCCTCCG 59.387 55.000 0.00 0.00 0.00 4.63
143 144 0.902531 GAACTTGGTGATCCCTCCGA 59.097 55.000 0.00 0.00 0.00 4.55
144 145 0.905357 AACTTGGTGATCCCTCCGAG 59.095 55.000 11.87 11.87 41.24 4.63
145 146 1.144936 CTTGGTGATCCCTCCGAGC 59.855 63.158 0.00 0.00 32.46 5.03
146 147 1.306141 TTGGTGATCCCTCCGAGCT 60.306 57.895 0.00 0.00 0.00 4.09
147 148 0.909610 TTGGTGATCCCTCCGAGCTT 60.910 55.000 0.00 0.00 0.00 3.74
148 149 1.330655 TGGTGATCCCTCCGAGCTTC 61.331 60.000 0.00 0.00 0.00 3.86
149 150 1.443828 GTGATCCCTCCGAGCTTCC 59.556 63.158 0.00 0.00 0.00 3.46
150 151 1.045911 GTGATCCCTCCGAGCTTCCT 61.046 60.000 0.00 0.00 0.00 3.36
151 152 0.757188 TGATCCCTCCGAGCTTCCTC 60.757 60.000 0.00 0.00 34.66 3.71
160 161 3.837669 GAGCTTCCTCGAGACGATC 57.162 57.895 15.71 6.05 34.61 3.69
161 162 1.305201 GAGCTTCCTCGAGACGATCT 58.695 55.000 15.71 3.95 34.61 2.75
162 163 1.263217 GAGCTTCCTCGAGACGATCTC 59.737 57.143 15.71 9.60 40.06 2.75
163 164 1.134220 AGCTTCCTCGAGACGATCTCT 60.134 52.381 15.71 0.00 41.26 3.10
164 165 1.002900 GCTTCCTCGAGACGATCTCTG 60.003 57.143 15.71 0.00 41.26 3.35
165 166 2.556257 CTTCCTCGAGACGATCTCTGA 58.444 52.381 15.71 0.00 41.26 3.27
166 167 2.693267 TCCTCGAGACGATCTCTGAA 57.307 50.000 15.71 0.27 41.26 3.02
167 168 2.556257 TCCTCGAGACGATCTCTGAAG 58.444 52.381 15.71 0.00 41.26 3.02
168 169 2.093394 TCCTCGAGACGATCTCTGAAGT 60.093 50.000 15.71 0.00 41.26 3.01
169 170 3.132467 TCCTCGAGACGATCTCTGAAGTA 59.868 47.826 15.71 0.00 41.26 2.24
170 171 3.246699 CCTCGAGACGATCTCTGAAGTAC 59.753 52.174 15.71 0.00 41.26 2.73
171 172 3.196463 TCGAGACGATCTCTGAAGTACC 58.804 50.000 11.50 0.00 41.26 3.34
172 173 3.118702 TCGAGACGATCTCTGAAGTACCT 60.119 47.826 11.50 0.00 41.26 3.08
173 174 4.099113 TCGAGACGATCTCTGAAGTACCTA 59.901 45.833 11.50 0.00 41.26 3.08
174 175 4.809958 CGAGACGATCTCTGAAGTACCTAA 59.190 45.833 11.50 0.00 41.26 2.69
175 176 5.050634 CGAGACGATCTCTGAAGTACCTAAG 60.051 48.000 11.50 0.00 41.26 2.18
176 177 5.991861 AGACGATCTCTGAAGTACCTAAGA 58.008 41.667 0.00 0.00 0.00 2.10
177 178 6.416415 AGACGATCTCTGAAGTACCTAAGAA 58.584 40.000 0.00 0.00 0.00 2.52
178 179 7.057894 AGACGATCTCTGAAGTACCTAAGAAT 58.942 38.462 0.00 0.00 0.00 2.40
179 180 7.012894 AGACGATCTCTGAAGTACCTAAGAATG 59.987 40.741 0.00 0.00 0.00 2.67
180 181 5.918011 CGATCTCTGAAGTACCTAAGAATGC 59.082 44.000 0.00 0.00 0.00 3.56
181 182 6.460261 CGATCTCTGAAGTACCTAAGAATGCA 60.460 42.308 0.00 0.00 0.00 3.96
182 183 6.798427 TCTCTGAAGTACCTAAGAATGCAT 57.202 37.500 0.00 0.00 0.00 3.96
183 184 7.898014 TCTCTGAAGTACCTAAGAATGCATA 57.102 36.000 0.00 0.00 0.00 3.14
184 185 8.306313 TCTCTGAAGTACCTAAGAATGCATAA 57.694 34.615 0.00 0.00 0.00 1.90
185 186 8.198109 TCTCTGAAGTACCTAAGAATGCATAAC 58.802 37.037 0.00 0.00 0.00 1.89
186 187 6.978659 TCTGAAGTACCTAAGAATGCATAACG 59.021 38.462 0.00 0.00 0.00 3.18
187 188 6.636705 TGAAGTACCTAAGAATGCATAACGT 58.363 36.000 0.00 0.00 0.00 3.99
188 189 6.533723 TGAAGTACCTAAGAATGCATAACGTG 59.466 38.462 0.00 0.00 0.00 4.49
199 200 2.849880 CATAACGTGCCCATTTGAGG 57.150 50.000 0.00 0.00 0.00 3.86
200 201 2.091541 CATAACGTGCCCATTTGAGGT 58.908 47.619 0.00 0.00 0.00 3.85
201 202 3.275143 CATAACGTGCCCATTTGAGGTA 58.725 45.455 0.00 0.00 0.00 3.08
202 203 1.821216 AACGTGCCCATTTGAGGTAG 58.179 50.000 0.00 0.00 0.00 3.18
203 204 0.676782 ACGTGCCCATTTGAGGTAGC 60.677 55.000 0.00 0.00 0.00 3.58
204 205 1.705337 CGTGCCCATTTGAGGTAGCG 61.705 60.000 0.00 0.00 0.00 4.26
205 206 0.676782 GTGCCCATTTGAGGTAGCGT 60.677 55.000 0.00 0.00 0.00 5.07
206 207 0.392461 TGCCCATTTGAGGTAGCGTC 60.392 55.000 0.00 0.00 0.00 5.19
207 208 1.095807 GCCCATTTGAGGTAGCGTCC 61.096 60.000 0.00 0.00 0.00 4.79
208 209 0.810031 CCCATTTGAGGTAGCGTCCG 60.810 60.000 0.00 0.00 0.00 4.79
209 210 0.174845 CCATTTGAGGTAGCGTCCGA 59.825 55.000 0.00 0.00 0.00 4.55
210 211 1.278238 CATTTGAGGTAGCGTCCGAC 58.722 55.000 0.00 0.00 0.00 4.79
211 212 1.135083 CATTTGAGGTAGCGTCCGACT 60.135 52.381 0.00 0.00 0.00 4.18
212 213 0.524862 TTTGAGGTAGCGTCCGACTC 59.475 55.000 0.00 0.00 0.00 3.36
213 214 0.322277 TTGAGGTAGCGTCCGACTCT 60.322 55.000 0.00 0.00 0.00 3.24
214 215 0.743701 TGAGGTAGCGTCCGACTCTC 60.744 60.000 0.00 0.00 0.00 3.20
215 216 1.764180 GAGGTAGCGTCCGACTCTCG 61.764 65.000 0.00 0.00 40.07 4.04
216 217 1.812922 GGTAGCGTCCGACTCTCGA 60.813 63.158 0.00 0.00 43.74 4.04
217 218 1.364626 GGTAGCGTCCGACTCTCGAA 61.365 60.000 0.00 0.00 43.74 3.71
218 219 0.656785 GTAGCGTCCGACTCTCGAAT 59.343 55.000 0.00 0.00 43.74 3.34
219 220 0.656259 TAGCGTCCGACTCTCGAATG 59.344 55.000 0.00 0.00 43.74 2.67
220 221 1.025113 AGCGTCCGACTCTCGAATGA 61.025 55.000 0.00 0.00 43.74 2.57
221 222 0.179171 GCGTCCGACTCTCGAATGAA 60.179 55.000 0.00 0.00 43.74 2.57
222 223 1.534175 GCGTCCGACTCTCGAATGAAT 60.534 52.381 0.00 0.00 43.74 2.57
223 224 2.798680 CGTCCGACTCTCGAATGAATT 58.201 47.619 0.00 0.00 43.74 2.17
224 225 3.179830 CGTCCGACTCTCGAATGAATTT 58.820 45.455 0.00 0.00 43.74 1.82
225 226 3.000674 CGTCCGACTCTCGAATGAATTTG 60.001 47.826 0.00 0.00 43.74 2.32
226 227 4.174009 GTCCGACTCTCGAATGAATTTGA 58.826 43.478 0.00 0.00 43.74 2.69
227 228 4.266502 GTCCGACTCTCGAATGAATTTGAG 59.733 45.833 12.39 12.39 43.74 3.02
228 229 4.082190 TCCGACTCTCGAATGAATTTGAGT 60.082 41.667 16.43 11.41 44.82 3.41
229 230 4.032217 CCGACTCTCGAATGAATTTGAGTG 59.968 45.833 16.43 16.14 44.82 3.51
230 231 4.032217 CGACTCTCGAATGAATTTGAGTGG 59.968 45.833 19.32 15.03 44.82 4.00
231 232 5.152623 ACTCTCGAATGAATTTGAGTGGA 57.847 39.130 19.32 4.75 44.82 4.02
232 233 5.174395 ACTCTCGAATGAATTTGAGTGGAG 58.826 41.667 19.32 13.08 44.82 3.86
233 234 3.935203 TCTCGAATGAATTTGAGTGGAGC 59.065 43.478 16.43 0.00 44.82 4.70
234 235 3.937706 CTCGAATGAATTTGAGTGGAGCT 59.062 43.478 10.89 0.00 41.38 4.09
235 236 3.935203 TCGAATGAATTTGAGTGGAGCTC 59.065 43.478 4.71 4.71 44.36 4.09
254 255 1.893801 TCGAAGAGGAAGGAGTTCACC 59.106 52.381 0.00 0.00 33.93 4.02
255 256 1.896465 CGAAGAGGAAGGAGTTCACCT 59.104 52.381 0.00 0.00 42.69 4.00
256 257 2.094442 CGAAGAGGAAGGAGTTCACCTC 60.094 54.545 0.00 0.00 46.28 3.85
258 259 1.258676 GAGGAAGGAGTTCACCTCGT 58.741 55.000 0.00 0.00 41.46 4.18
262 263 0.685660 AAGGAGTTCACCTCGTTCCC 59.314 55.000 0.00 0.00 43.04 3.97
263 264 1.080025 GGAGTTCACCTCGTTCCCG 60.080 63.158 0.00 0.00 41.46 5.14
264 265 1.530013 GGAGTTCACCTCGTTCCCGA 61.530 60.000 0.00 0.00 41.46 5.14
265 266 0.531200 GAGTTCACCTCGTTCCCGAT 59.469 55.000 0.00 0.00 43.27 4.18
266 267 0.246635 AGTTCACCTCGTTCCCGATG 59.753 55.000 0.00 0.00 43.27 3.84
267 268 0.739813 GTTCACCTCGTTCCCGATGG 60.740 60.000 0.00 0.00 43.27 3.51
268 269 2.511600 CACCTCGTTCCCGATGGC 60.512 66.667 0.00 0.00 43.27 4.40
269 270 4.143333 ACCTCGTTCCCGATGGCG 62.143 66.667 0.00 0.00 43.27 5.69
291 292 3.175240 CGCGAGCTCTTGTCCACG 61.175 66.667 12.85 0.00 0.00 4.94
292 293 2.811317 GCGAGCTCTTGTCCACGG 60.811 66.667 12.85 0.00 0.00 4.94
293 294 2.651361 CGAGCTCTTGTCCACGGT 59.349 61.111 12.85 0.00 0.00 4.83
294 295 1.444553 CGAGCTCTTGTCCACGGTC 60.445 63.158 12.85 0.00 0.00 4.79
295 296 1.079750 GAGCTCTTGTCCACGGTCC 60.080 63.158 6.43 0.00 0.00 4.46
296 297 1.534235 AGCTCTTGTCCACGGTCCT 60.534 57.895 0.00 0.00 0.00 3.85
297 298 1.079750 GCTCTTGTCCACGGTCCTC 60.080 63.158 0.00 0.00 0.00 3.71
298 299 1.213013 CTCTTGTCCACGGTCCTCG 59.787 63.158 0.00 0.00 45.88 4.63
299 300 2.432628 CTTGTCCACGGTCCTCGC 60.433 66.667 0.00 0.00 43.89 5.03
300 301 3.934391 CTTGTCCACGGTCCTCGCC 62.934 68.421 0.00 0.00 43.89 5.54
307 308 4.796231 CGGTCCTCGCCGTCCTTG 62.796 72.222 0.00 0.00 46.11 3.61
316 317 2.819595 CCGTCCTTGCGGTGATGG 60.820 66.667 0.00 0.00 46.11 3.51
317 318 2.047274 CGTCCTTGCGGTGATGGT 60.047 61.111 0.00 0.00 0.00 3.55
318 319 2.390599 CGTCCTTGCGGTGATGGTG 61.391 63.158 0.00 0.00 0.00 4.17
319 320 1.302511 GTCCTTGCGGTGATGGTGT 60.303 57.895 0.00 0.00 0.00 4.16
320 321 1.302431 TCCTTGCGGTGATGGTGTG 60.302 57.895 0.00 0.00 0.00 3.82
321 322 1.302431 CCTTGCGGTGATGGTGTGA 60.302 57.895 0.00 0.00 0.00 3.58
322 323 1.577328 CCTTGCGGTGATGGTGTGAC 61.577 60.000 0.00 0.00 0.00 3.67
323 324 1.900585 CTTGCGGTGATGGTGTGACG 61.901 60.000 0.00 0.00 0.00 4.35
324 325 2.357034 GCGGTGATGGTGTGACGT 60.357 61.111 0.00 0.00 0.00 4.34
325 326 2.667318 GCGGTGATGGTGTGACGTG 61.667 63.158 0.00 0.00 0.00 4.49
326 327 2.667318 CGGTGATGGTGTGACGTGC 61.667 63.158 0.00 0.00 0.00 5.34
327 328 1.596752 GGTGATGGTGTGACGTGCA 60.597 57.895 0.00 0.00 0.00 4.57
328 329 0.955428 GGTGATGGTGTGACGTGCAT 60.955 55.000 0.00 0.00 0.00 3.96
329 330 0.166597 GTGATGGTGTGACGTGCATG 59.833 55.000 3.82 3.82 0.00 4.06
330 331 0.954938 TGATGGTGTGACGTGCATGG 60.955 55.000 11.36 0.00 0.00 3.66
331 332 0.955428 GATGGTGTGACGTGCATGGT 60.955 55.000 11.36 1.43 0.00 3.55
332 333 1.236616 ATGGTGTGACGTGCATGGTG 61.237 55.000 11.36 0.00 0.00 4.17
333 334 1.596752 GGTGTGACGTGCATGGTGA 60.597 57.895 11.36 0.00 0.00 4.02
334 335 0.955428 GGTGTGACGTGCATGGTGAT 60.955 55.000 11.36 0.00 0.00 3.06
335 336 0.166597 GTGTGACGTGCATGGTGATG 59.833 55.000 11.36 0.00 0.00 3.07
336 337 0.954938 TGTGACGTGCATGGTGATGG 60.955 55.000 11.36 0.00 0.00 3.51
337 338 0.955428 GTGACGTGCATGGTGATGGT 60.955 55.000 11.36 0.00 0.00 3.55
338 339 0.673333 TGACGTGCATGGTGATGGTC 60.673 55.000 11.36 0.00 0.00 4.02
339 340 1.695893 GACGTGCATGGTGATGGTCG 61.696 60.000 11.36 0.00 0.00 4.79
340 341 1.447663 CGTGCATGGTGATGGTCGA 60.448 57.895 0.00 0.00 0.00 4.20
341 342 1.423721 CGTGCATGGTGATGGTCGAG 61.424 60.000 0.00 0.00 0.00 4.04
342 343 1.091771 GTGCATGGTGATGGTCGAGG 61.092 60.000 0.00 0.00 0.00 4.63
343 344 1.524621 GCATGGTGATGGTCGAGGG 60.525 63.158 0.00 0.00 0.00 4.30
344 345 1.971505 GCATGGTGATGGTCGAGGGA 61.972 60.000 0.00 0.00 0.00 4.20
345 346 0.761187 CATGGTGATGGTCGAGGGAT 59.239 55.000 0.00 0.00 0.00 3.85
346 347 0.761187 ATGGTGATGGTCGAGGGATG 59.239 55.000 0.00 0.00 0.00 3.51
347 348 1.227674 GGTGATGGTCGAGGGATGC 60.228 63.158 0.00 0.00 0.00 3.91
348 349 1.690219 GGTGATGGTCGAGGGATGCT 61.690 60.000 0.00 0.00 0.00 3.79
349 350 0.249657 GTGATGGTCGAGGGATGCTC 60.250 60.000 0.00 0.00 0.00 4.26
350 351 1.369321 GATGGTCGAGGGATGCTCC 59.631 63.158 0.00 0.00 35.23 4.70
351 352 2.427540 GATGGTCGAGGGATGCTCCG 62.428 65.000 0.00 0.00 37.43 4.63
352 353 4.593864 GGTCGAGGGATGCTCCGC 62.594 72.222 0.00 0.00 37.43 5.54
353 354 3.838271 GTCGAGGGATGCTCCGCA 61.838 66.667 0.00 0.00 44.86 5.69
363 364 3.143675 TGCTCCGCATCAAGAACTC 57.856 52.632 0.00 0.00 31.71 3.01
364 365 0.610174 TGCTCCGCATCAAGAACTCT 59.390 50.000 0.00 0.00 31.71 3.24
365 366 1.824852 TGCTCCGCATCAAGAACTCTA 59.175 47.619 0.00 0.00 31.71 2.43
366 367 2.432146 TGCTCCGCATCAAGAACTCTAT 59.568 45.455 0.00 0.00 31.71 1.98
367 368 3.118629 TGCTCCGCATCAAGAACTCTATT 60.119 43.478 0.00 0.00 31.71 1.73
368 369 3.873952 GCTCCGCATCAAGAACTCTATTT 59.126 43.478 0.00 0.00 0.00 1.40
369 370 4.260538 GCTCCGCATCAAGAACTCTATTTG 60.261 45.833 0.00 0.00 0.00 2.32
370 371 4.832248 TCCGCATCAAGAACTCTATTTGT 58.168 39.130 0.00 0.00 0.00 2.83
371 372 5.245531 TCCGCATCAAGAACTCTATTTGTT 58.754 37.500 0.00 0.00 0.00 2.83
372 373 5.705441 TCCGCATCAAGAACTCTATTTGTTT 59.295 36.000 0.00 0.00 0.00 2.83
373 374 6.206634 TCCGCATCAAGAACTCTATTTGTTTT 59.793 34.615 0.00 0.00 0.00 2.43
374 375 6.863126 CCGCATCAAGAACTCTATTTGTTTTT 59.137 34.615 0.00 0.00 0.00 1.94
375 376 8.020819 CCGCATCAAGAACTCTATTTGTTTTTA 58.979 33.333 0.00 0.00 0.00 1.52
376 377 8.840867 CGCATCAAGAACTCTATTTGTTTTTAC 58.159 33.333 0.00 0.00 0.00 2.01
377 378 9.899226 GCATCAAGAACTCTATTTGTTTTTACT 57.101 29.630 0.00 0.00 0.00 2.24
382 383 8.782533 AGAACTCTATTTGTTTTTACTTTGCG 57.217 30.769 0.00 0.00 0.00 4.85
383 384 8.403236 AGAACTCTATTTGTTTTTACTTTGCGT 58.597 29.630 0.00 0.00 0.00 5.24
384 385 7.908193 ACTCTATTTGTTTTTACTTTGCGTG 57.092 32.000 0.00 0.00 0.00 5.34
385 386 7.477494 ACTCTATTTGTTTTTACTTTGCGTGT 58.523 30.769 0.00 0.00 0.00 4.49
386 387 8.614346 ACTCTATTTGTTTTTACTTTGCGTGTA 58.386 29.630 0.00 0.00 0.00 2.90
387 388 8.770850 TCTATTTGTTTTTACTTTGCGTGTAC 57.229 30.769 0.00 0.00 0.00 2.90
388 389 8.614346 TCTATTTGTTTTTACTTTGCGTGTACT 58.386 29.630 0.00 0.00 0.00 2.73
389 390 7.673810 ATTTGTTTTTACTTTGCGTGTACTC 57.326 32.000 0.00 0.00 0.00 2.59
390 391 6.425577 TTGTTTTTACTTTGCGTGTACTCT 57.574 33.333 0.00 0.00 0.00 3.24
391 392 6.425577 TGTTTTTACTTTGCGTGTACTCTT 57.574 33.333 0.00 0.00 0.00 2.85
392 393 6.252281 TGTTTTTACTTTGCGTGTACTCTTG 58.748 36.000 0.00 0.00 0.00 3.02
393 394 4.461992 TTTACTTTGCGTGTACTCTTGC 57.538 40.909 0.00 0.00 0.00 4.01
394 395 2.240493 ACTTTGCGTGTACTCTTGCT 57.760 45.000 0.00 0.00 0.00 3.91
395 396 2.135933 ACTTTGCGTGTACTCTTGCTC 58.864 47.619 0.00 0.00 0.00 4.26
396 397 2.135139 CTTTGCGTGTACTCTTGCTCA 58.865 47.619 0.00 0.00 0.00 4.26
397 398 1.497991 TTGCGTGTACTCTTGCTCAC 58.502 50.000 0.00 0.00 0.00 3.51
398 399 0.387565 TGCGTGTACTCTTGCTCACA 59.612 50.000 0.00 0.00 0.00 3.58
399 400 1.000843 TGCGTGTACTCTTGCTCACAT 59.999 47.619 0.00 0.00 0.00 3.21
400 401 1.656095 GCGTGTACTCTTGCTCACATC 59.344 52.381 0.00 0.00 0.00 3.06
401 402 1.914051 CGTGTACTCTTGCTCACATCG 59.086 52.381 0.00 0.00 0.00 3.84
402 403 2.668556 CGTGTACTCTTGCTCACATCGT 60.669 50.000 0.00 0.00 0.00 3.73
403 404 3.318017 GTGTACTCTTGCTCACATCGTT 58.682 45.455 0.00 0.00 0.00 3.85
404 405 3.365220 GTGTACTCTTGCTCACATCGTTC 59.635 47.826 0.00 0.00 0.00 3.95
405 406 3.255888 TGTACTCTTGCTCACATCGTTCT 59.744 43.478 0.00 0.00 0.00 3.01
406 407 2.953020 ACTCTTGCTCACATCGTTCTC 58.047 47.619 0.00 0.00 0.00 2.87
407 408 2.560542 ACTCTTGCTCACATCGTTCTCT 59.439 45.455 0.00 0.00 0.00 3.10
408 409 3.178267 CTCTTGCTCACATCGTTCTCTC 58.822 50.000 0.00 0.00 0.00 3.20
409 410 1.916651 CTTGCTCACATCGTTCTCTCG 59.083 52.381 0.00 0.00 0.00 4.04
410 411 0.881796 TGCTCACATCGTTCTCTCGT 59.118 50.000 0.00 0.00 0.00 4.18
411 412 1.269723 TGCTCACATCGTTCTCTCGTT 59.730 47.619 0.00 0.00 0.00 3.85
412 413 1.914700 GCTCACATCGTTCTCTCGTTC 59.085 52.381 0.00 0.00 0.00 3.95
413 414 2.414824 GCTCACATCGTTCTCTCGTTCT 60.415 50.000 0.00 0.00 0.00 3.01
414 415 3.167425 CTCACATCGTTCTCTCGTTCTG 58.833 50.000 0.00 0.00 0.00 3.02
415 416 1.651138 CACATCGTTCTCTCGTTCTGC 59.349 52.381 0.00 0.00 0.00 4.26
416 417 1.272781 CATCGTTCTCTCGTTCTGCC 58.727 55.000 0.00 0.00 0.00 4.85
417 418 0.888619 ATCGTTCTCTCGTTCTGCCA 59.111 50.000 0.00 0.00 0.00 4.92
418 419 0.039437 TCGTTCTCTCGTTCTGCCAC 60.039 55.000 0.00 0.00 0.00 5.01
419 420 0.318699 CGTTCTCTCGTTCTGCCACA 60.319 55.000 0.00 0.00 0.00 4.17
420 421 1.670087 CGTTCTCTCGTTCTGCCACAT 60.670 52.381 0.00 0.00 0.00 3.21
421 422 1.996191 GTTCTCTCGTTCTGCCACATC 59.004 52.381 0.00 0.00 0.00 3.06
422 423 1.256812 TCTCTCGTTCTGCCACATCA 58.743 50.000 0.00 0.00 0.00 3.07
423 424 1.203287 TCTCTCGTTCTGCCACATCAG 59.797 52.381 0.00 0.00 35.46 2.90
424 425 0.390340 TCTCGTTCTGCCACATCAGC 60.390 55.000 0.00 0.00 34.19 4.26
425 426 1.364626 CTCGTTCTGCCACATCAGCC 61.365 60.000 0.00 0.00 34.19 4.85
426 427 1.376424 CGTTCTGCCACATCAGCCT 60.376 57.895 0.00 0.00 34.19 4.58
427 428 1.642037 CGTTCTGCCACATCAGCCTG 61.642 60.000 0.00 0.00 34.19 4.85
428 429 0.607489 GTTCTGCCACATCAGCCTGT 60.607 55.000 0.00 0.00 34.19 4.00
429 430 0.111061 TTCTGCCACATCAGCCTGTT 59.889 50.000 0.00 0.00 34.19 3.16
430 431 0.607217 TCTGCCACATCAGCCTGTTG 60.607 55.000 1.21 1.21 34.19 3.33
431 432 1.592400 CTGCCACATCAGCCTGTTGG 61.592 60.000 7.63 6.57 0.00 3.77
442 443 3.806591 CCTGTTGGCATGCTTTCTG 57.193 52.632 18.92 11.11 0.00 3.02
443 444 0.963962 CCTGTTGGCATGCTTTCTGT 59.036 50.000 18.92 0.00 0.00 3.41
444 445 1.336517 CCTGTTGGCATGCTTTCTGTG 60.337 52.381 18.92 2.47 0.00 3.66
445 446 1.610038 CTGTTGGCATGCTTTCTGTGA 59.390 47.619 18.92 0.00 0.00 3.58
446 447 1.337703 TGTTGGCATGCTTTCTGTGAC 59.662 47.619 18.92 5.65 0.00 3.67
447 448 1.337703 GTTGGCATGCTTTCTGTGACA 59.662 47.619 18.92 0.00 0.00 3.58
448 449 0.953727 TGGCATGCTTTCTGTGACAC 59.046 50.000 18.92 0.00 0.00 3.67
449 450 1.242076 GGCATGCTTTCTGTGACACT 58.758 50.000 18.92 0.00 0.00 3.55
450 451 1.610522 GGCATGCTTTCTGTGACACTT 59.389 47.619 18.92 0.00 0.00 3.16
451 452 2.606308 GGCATGCTTTCTGTGACACTTG 60.606 50.000 18.92 0.11 0.00 3.16
452 453 2.033801 GCATGCTTTCTGTGACACTTGT 59.966 45.455 11.37 0.00 0.00 3.16
453 454 3.851105 GCATGCTTTCTGTGACACTTGTC 60.851 47.826 11.37 2.19 44.97 3.18
454 455 2.288666 TGCTTTCTGTGACACTTGTCC 58.711 47.619 7.20 0.00 44.15 4.02
455 456 1.261619 GCTTTCTGTGACACTTGTCCG 59.738 52.381 7.20 0.00 44.15 4.79
456 457 2.550978 CTTTCTGTGACACTTGTCCGT 58.449 47.619 7.20 0.00 44.15 4.69
457 458 3.713288 CTTTCTGTGACACTTGTCCGTA 58.287 45.455 7.20 0.00 44.15 4.02
458 459 3.804786 TTCTGTGACACTTGTCCGTAA 57.195 42.857 7.20 0.00 44.15 3.18
459 460 3.364889 TCTGTGACACTTGTCCGTAAG 57.635 47.619 7.20 0.32 44.15 2.34
460 461 2.691526 TCTGTGACACTTGTCCGTAAGT 59.308 45.455 7.20 0.00 44.15 2.24
468 469 4.612264 ACTTGTCCGTAAGTGGTACATT 57.388 40.909 0.00 0.00 44.52 2.71
469 470 4.964593 ACTTGTCCGTAAGTGGTACATTT 58.035 39.130 0.00 0.00 44.52 2.32
470 471 4.753107 ACTTGTCCGTAAGTGGTACATTTG 59.247 41.667 0.00 0.00 44.52 2.32
471 472 4.603989 TGTCCGTAAGTGGTACATTTGA 57.396 40.909 0.00 0.00 44.52 2.69
472 473 4.562082 TGTCCGTAAGTGGTACATTTGAG 58.438 43.478 0.00 0.00 44.52 3.02
473 474 4.039488 TGTCCGTAAGTGGTACATTTGAGT 59.961 41.667 0.00 0.00 44.52 3.41
474 475 4.992951 GTCCGTAAGTGGTACATTTGAGTT 59.007 41.667 0.00 0.00 44.52 3.01
475 476 5.119743 GTCCGTAAGTGGTACATTTGAGTTC 59.880 44.000 0.00 0.00 44.52 3.01
476 477 4.992319 CCGTAAGTGGTACATTTGAGTTCA 59.008 41.667 0.00 0.00 44.52 3.18
477 478 5.107220 CCGTAAGTGGTACATTTGAGTTCAC 60.107 44.000 0.00 0.00 44.52 3.18
478 479 5.107220 CGTAAGTGGTACATTTGAGTTCACC 60.107 44.000 0.00 0.00 44.52 4.02
479 480 4.431416 AGTGGTACATTTGAGTTCACCA 57.569 40.909 0.00 0.00 44.52 4.17
480 481 4.985538 AGTGGTACATTTGAGTTCACCAT 58.014 39.130 0.00 0.00 44.52 3.55
481 482 5.003804 AGTGGTACATTTGAGTTCACCATC 58.996 41.667 0.00 0.00 44.52 3.51
482 483 4.000325 TGGTACATTTGAGTTCACCATCG 59.000 43.478 0.00 0.00 31.29 3.84
483 484 4.000988 GGTACATTTGAGTTCACCATCGT 58.999 43.478 0.00 0.00 0.00 3.73
484 485 5.172934 GGTACATTTGAGTTCACCATCGTA 58.827 41.667 0.00 0.00 0.00 3.43
485 486 5.815740 GGTACATTTGAGTTCACCATCGTAT 59.184 40.000 0.00 0.00 0.00 3.06
486 487 6.982141 GGTACATTTGAGTTCACCATCGTATA 59.018 38.462 0.00 0.00 0.00 1.47
487 488 6.903883 ACATTTGAGTTCACCATCGTATAC 57.096 37.500 0.00 0.00 0.00 1.47
488 489 6.403049 ACATTTGAGTTCACCATCGTATACA 58.597 36.000 3.32 0.00 0.00 2.29
489 490 7.047891 ACATTTGAGTTCACCATCGTATACAT 58.952 34.615 3.32 0.00 0.00 2.29
490 491 8.201464 ACATTTGAGTTCACCATCGTATACATA 58.799 33.333 3.32 0.00 0.00 2.29
491 492 8.703336 CATTTGAGTTCACCATCGTATACATAG 58.297 37.037 3.32 0.00 0.00 2.23
492 493 7.576861 TTGAGTTCACCATCGTATACATAGA 57.423 36.000 3.32 0.00 0.00 1.98
493 494 6.967135 TGAGTTCACCATCGTATACATAGAC 58.033 40.000 3.32 0.00 0.00 2.59
494 495 6.771267 TGAGTTCACCATCGTATACATAGACT 59.229 38.462 3.32 0.00 0.00 3.24
495 496 7.935210 TGAGTTCACCATCGTATACATAGACTA 59.065 37.037 3.32 0.00 0.00 2.59
496 497 8.687292 AGTTCACCATCGTATACATAGACTAA 57.313 34.615 3.32 0.00 0.00 2.24
497 498 9.298250 AGTTCACCATCGTATACATAGACTAAT 57.702 33.333 3.32 0.00 0.00 1.73
523 524 6.538742 AGTTACATGTGTATATGCAGGTCAAC 59.461 38.462 9.11 0.00 31.84 3.18
539 540 4.637534 AGGTCAACAGAAATCAATGGATCG 59.362 41.667 0.00 0.00 31.88 3.69
560 561 7.604164 GGATCGTGTCCATAACATCTAATCAAT 59.396 37.037 5.00 0.00 46.96 2.57
587 588 8.866956 CCGGGATATACATTTATTTACTCGAAC 58.133 37.037 0.00 0.00 0.00 3.95
659 662 4.940463 AGCATATGTGAAATGAATGTGGC 58.060 39.130 4.29 0.00 0.00 5.01
662 665 2.987413 TGTGAAATGAATGTGGCGAC 57.013 45.000 0.00 0.00 0.00 5.19
676 679 3.058293 TGTGGCGACTTATTTGCTTCTTG 60.058 43.478 0.00 0.00 34.56 3.02
678 681 3.568007 TGGCGACTTATTTGCTTCTTGTT 59.432 39.130 0.00 0.00 34.56 2.83
680 683 4.617223 GGCGACTTATTTGCTTCTTGTTTC 59.383 41.667 0.00 0.00 34.56 2.78
681 684 5.212194 GCGACTTATTTGCTTCTTGTTTCA 58.788 37.500 0.00 0.00 0.00 2.69
682 685 5.340667 GCGACTTATTTGCTTCTTGTTTCAG 59.659 40.000 0.00 0.00 0.00 3.02
684 687 7.572759 CGACTTATTTGCTTCTTGTTTCAGTA 58.427 34.615 0.00 0.00 0.00 2.74
685 688 8.067784 CGACTTATTTGCTTCTTGTTTCAGTAA 58.932 33.333 0.00 0.00 0.00 2.24
729 815 5.246203 AGACAGATTTGCTAGGTGTGAGTAA 59.754 40.000 0.00 0.00 0.00 2.24
788 924 0.465287 TCTCGAAGGCTGCATGCATA 59.535 50.000 22.97 0.00 45.15 3.14
799 935 3.429822 GCTGCATGCATAGTTGATGGTTT 60.430 43.478 22.97 0.00 42.31 3.27
824 963 6.591750 TTATTCCCTAGACGATCAGAATCC 57.408 41.667 0.00 0.00 0.00 3.01
905 1235 4.506288 TGCACAATTACTATCCGATTCACG 59.494 41.667 0.00 0.00 42.18 4.35
942 1312 2.199236 GTACGTCCACGATGGGAATTC 58.801 52.381 6.03 0.00 43.02 2.17
1052 1449 3.454573 CATTGTGCTGGCCGCCAT 61.455 61.111 13.86 0.00 38.05 4.40
1058 1455 3.131478 GCTGGCCGCCATTACGTT 61.131 61.111 13.86 0.00 30.82 3.99
1101 1498 2.741092 GACAAGGACCTGGCGTCA 59.259 61.111 12.08 0.00 43.95 4.35
1114 1511 1.092345 GGCGTCAGAGGATTCCTTGC 61.092 60.000 6.68 6.49 31.76 4.01
1521 1934 1.065199 GGCATCAACTCCATCAGGACA 60.065 52.381 0.00 0.00 39.61 4.02
1625 2038 6.959361 AGTTAGCCTTCAAATACATAATGCG 58.041 36.000 0.00 0.00 0.00 4.73
1959 2378 8.413229 CCCATAAAATACTGGATCGTGAAAAAT 58.587 33.333 0.00 0.00 34.24 1.82
2051 2475 3.179925 GCATCTGTGGCATCCTCAA 57.820 52.632 0.00 0.00 0.00 3.02
2110 2535 7.986704 AGGTGGAAATGATATCATGAAGAGAT 58.013 34.615 18.85 0.00 36.56 2.75
2135 2560 2.305009 ACGGTCTGTGTATAGGTAGCC 58.695 52.381 0.00 0.00 0.00 3.93
2145 2570 7.985184 TCTGTGTATAGGTAGCCATTTTAACAG 59.015 37.037 0.00 0.00 0.00 3.16
2444 2889 9.382244 AGAAAAATAATTGTATCGCTAATTCGC 57.618 29.630 0.00 0.00 0.00 4.70
2445 2890 9.382244 GAAAAATAATTGTATCGCTAATTCGCT 57.618 29.630 0.08 0.00 0.00 4.93
2469 2914 8.687824 CTATTAAAGCACAACACCAAATAAGG 57.312 34.615 0.00 0.00 0.00 2.69
2572 3017 9.806203 ACGTACAATATATGCTAGTACAACAAA 57.194 29.630 13.69 0.00 35.89 2.83
2609 3054 8.871686 AAAACAAGAAAAAGAATTGTATCGCT 57.128 26.923 0.00 0.00 36.18 4.93
2610 3055 9.959749 AAAACAAGAAAAAGAATTGTATCGCTA 57.040 25.926 0.00 0.00 36.18 4.26
2622 3067 9.769093 AGAATTGTATCGCTATTAAAACACAAC 57.231 29.630 0.00 0.00 0.00 3.32
2623 3068 9.549509 GAATTGTATCGCTATTAAAACACAACA 57.450 29.630 0.00 0.00 0.00 3.33
2624 3069 8.889849 ATTGTATCGCTATTAAAACACAACAC 57.110 30.769 0.00 0.00 0.00 3.32
2625 3070 6.833839 TGTATCGCTATTAAAACACAACACC 58.166 36.000 0.00 0.00 0.00 4.16
2626 3071 5.950758 ATCGCTATTAAAACACAACACCA 57.049 34.783 0.00 0.00 0.00 4.17
2627 3072 5.752892 TCGCTATTAAAACACAACACCAA 57.247 34.783 0.00 0.00 0.00 3.67
2628 3073 6.132791 TCGCTATTAAAACACAACACCAAA 57.867 33.333 0.00 0.00 0.00 3.28
2629 3074 6.740110 TCGCTATTAAAACACAACACCAAAT 58.260 32.000 0.00 0.00 0.00 2.32
2630 3075 7.872881 TCGCTATTAAAACACAACACCAAATA 58.127 30.769 0.00 0.00 0.00 1.40
2631 3076 8.350722 TCGCTATTAAAACACAACACCAAATAA 58.649 29.630 0.00 0.00 0.00 1.40
2632 3077 8.635124 CGCTATTAAAACACAACACCAAATAAG 58.365 33.333 0.00 0.00 0.00 1.73
2633 3078 9.685828 GCTATTAAAACACAACACCAAATAAGA 57.314 29.630 0.00 0.00 0.00 2.10
2639 3084 9.665719 AAAACACAACACCAAATAAGAAAAGAT 57.334 25.926 0.00 0.00 0.00 2.40
2692 3137 9.791820 CTATCATACAAATTTGATTGCTTGTCA 57.208 29.630 24.64 5.14 34.52 3.58
2795 3240 7.170277 TGTAGAACACTTTATTTTAGACCCCC 58.830 38.462 0.00 0.00 0.00 5.40
2882 3327 7.548196 TTTCATTAAATACTTGACCTAGGCG 57.452 36.000 9.30 0.00 0.00 5.52
2886 3331 7.286087 TCATTAAATACTTGACCTAGGCGTCTA 59.714 37.037 9.30 0.00 33.70 2.59
2989 3529 6.237901 TCAATGCAGTAAAATGGTCACTACT 58.762 36.000 0.00 0.00 0.00 2.57
3011 3551 1.042229 AGAACAAGCAAGCAATGGCA 58.958 45.000 0.00 0.00 44.61 4.92
3068 3619 7.045416 CCACCACTGCTAACATATTACAAGTA 58.955 38.462 0.00 0.00 0.00 2.24
3100 3651 0.396556 TAGTGGCTGGCGACCTATCA 60.397 55.000 4.22 0.00 0.00 2.15
3105 3656 1.226974 CTGGCGACCTATCACACCG 60.227 63.158 0.00 0.00 0.00 4.94
3111 3662 2.189521 CCTATCACACCGGCCACC 59.810 66.667 0.00 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 4.475135 GAAGCCGCTGGAGGGACC 62.475 72.222 0.00 0.00 39.54 4.46
45 46 4.821589 CGAAGCCGCTGGAGGGAC 62.822 72.222 0.00 0.00 0.00 4.46
48 49 4.379243 ACACGAAGCCGCTGGAGG 62.379 66.667 0.00 0.00 39.95 4.30
49 50 2.811317 GACACGAAGCCGCTGGAG 60.811 66.667 0.00 0.00 39.95 3.86
50 51 4.373116 GGACACGAAGCCGCTGGA 62.373 66.667 0.00 0.00 39.95 3.86
55 56 4.367023 TTCCCGGACACGAAGCCG 62.367 66.667 0.73 0.00 46.80 5.52
56 57 2.741211 GTTCCCGGACACGAAGCC 60.741 66.667 0.73 0.00 44.60 4.35
57 58 1.737008 GAGTTCCCGGACACGAAGC 60.737 63.158 0.73 0.00 44.60 3.86
58 59 1.080025 GGAGTTCCCGGACACGAAG 60.080 63.158 0.73 0.00 44.60 3.79
59 60 1.189524 ATGGAGTTCCCGGACACGAA 61.190 55.000 0.73 0.00 44.60 3.85
60 61 1.601419 GATGGAGTTCCCGGACACGA 61.601 60.000 0.73 0.00 44.60 4.35
61 62 1.153628 GATGGAGTTCCCGGACACG 60.154 63.158 0.73 0.00 37.93 4.49
62 63 0.175989 GAGATGGAGTTCCCGGACAC 59.824 60.000 0.73 0.00 37.93 3.67
63 64 0.976073 GGAGATGGAGTTCCCGGACA 60.976 60.000 0.73 0.00 37.93 4.02
64 65 0.688087 AGGAGATGGAGTTCCCGGAC 60.688 60.000 0.73 0.00 37.93 4.79
65 66 0.397254 GAGGAGATGGAGTTCCCGGA 60.397 60.000 0.73 0.00 37.93 5.14
66 67 1.739338 CGAGGAGATGGAGTTCCCGG 61.739 65.000 0.00 0.00 37.93 5.73
67 68 1.736586 CGAGGAGATGGAGTTCCCG 59.263 63.158 0.00 0.00 37.93 5.14
68 69 1.330655 TGCGAGGAGATGGAGTTCCC 61.331 60.000 0.00 0.00 33.83 3.97
69 70 0.179097 GTGCGAGGAGATGGAGTTCC 60.179 60.000 0.00 0.00 0.00 3.62
70 71 0.526524 CGTGCGAGGAGATGGAGTTC 60.527 60.000 0.00 0.00 0.00 3.01
71 72 1.251527 ACGTGCGAGGAGATGGAGTT 61.252 55.000 0.00 0.00 0.00 3.01
72 73 1.658686 GACGTGCGAGGAGATGGAGT 61.659 60.000 0.00 0.00 0.00 3.85
73 74 1.064946 GACGTGCGAGGAGATGGAG 59.935 63.158 0.00 0.00 0.00 3.86
74 75 0.965866 AAGACGTGCGAGGAGATGGA 60.966 55.000 0.00 0.00 0.00 3.41
75 76 0.526524 GAAGACGTGCGAGGAGATGG 60.527 60.000 0.00 0.00 0.00 3.51
76 77 0.171231 TGAAGACGTGCGAGGAGATG 59.829 55.000 0.00 0.00 0.00 2.90
77 78 1.107114 ATGAAGACGTGCGAGGAGAT 58.893 50.000 0.00 0.00 0.00 2.75
78 79 0.171231 CATGAAGACGTGCGAGGAGA 59.829 55.000 0.00 0.00 0.00 3.71
79 80 1.416813 GCATGAAGACGTGCGAGGAG 61.417 60.000 0.00 0.00 46.65 3.69
80 81 1.446099 GCATGAAGACGTGCGAGGA 60.446 57.895 0.00 0.00 46.65 3.71
81 82 3.084579 GCATGAAGACGTGCGAGG 58.915 61.111 0.00 0.00 46.65 4.63
86 87 2.376808 AGGAGAAGCATGAAGACGTG 57.623 50.000 0.00 0.00 36.24 4.49
87 88 2.564947 AGAAGGAGAAGCATGAAGACGT 59.435 45.455 0.00 0.00 0.00 4.34
88 89 3.244033 AGAAGGAGAAGCATGAAGACG 57.756 47.619 0.00 0.00 0.00 4.18
89 90 4.831107 AGAAGAAGGAGAAGCATGAAGAC 58.169 43.478 0.00 0.00 0.00 3.01
90 91 5.243981 CAAGAAGAAGGAGAAGCATGAAGA 58.756 41.667 0.00 0.00 0.00 2.87
91 92 4.395542 CCAAGAAGAAGGAGAAGCATGAAG 59.604 45.833 0.00 0.00 0.00 3.02
92 93 4.330250 CCAAGAAGAAGGAGAAGCATGAA 58.670 43.478 0.00 0.00 0.00 2.57
93 94 3.307975 CCCAAGAAGAAGGAGAAGCATGA 60.308 47.826 0.00 0.00 0.00 3.07
94 95 3.015327 CCCAAGAAGAAGGAGAAGCATG 58.985 50.000 0.00 0.00 0.00 4.06
95 96 2.646798 ACCCAAGAAGAAGGAGAAGCAT 59.353 45.455 0.00 0.00 0.00 3.79
96 97 2.039084 GACCCAAGAAGAAGGAGAAGCA 59.961 50.000 0.00 0.00 0.00 3.91
97 98 2.304470 AGACCCAAGAAGAAGGAGAAGC 59.696 50.000 0.00 0.00 0.00 3.86
98 99 3.055458 GGAGACCCAAGAAGAAGGAGAAG 60.055 52.174 0.00 0.00 0.00 2.85
99 100 2.907042 GGAGACCCAAGAAGAAGGAGAA 59.093 50.000 0.00 0.00 0.00 2.87
100 101 2.541466 GGAGACCCAAGAAGAAGGAGA 58.459 52.381 0.00 0.00 0.00 3.71
101 102 1.205893 CGGAGACCCAAGAAGAAGGAG 59.794 57.143 0.00 0.00 0.00 3.69
102 103 1.267121 CGGAGACCCAAGAAGAAGGA 58.733 55.000 0.00 0.00 0.00 3.36
103 104 0.250513 CCGGAGACCCAAGAAGAAGG 59.749 60.000 0.00 0.00 0.00 3.46
104 105 0.977395 ACCGGAGACCCAAGAAGAAG 59.023 55.000 9.46 0.00 0.00 2.85
105 106 0.685097 CACCGGAGACCCAAGAAGAA 59.315 55.000 9.46 0.00 0.00 2.52
106 107 0.178944 TCACCGGAGACCCAAGAAGA 60.179 55.000 9.46 0.00 0.00 2.87
107 108 0.685097 TTCACCGGAGACCCAAGAAG 59.315 55.000 9.46 0.00 0.00 2.85
108 109 0.395312 GTTCACCGGAGACCCAAGAA 59.605 55.000 9.46 0.00 0.00 2.52
109 110 0.471211 AGTTCACCGGAGACCCAAGA 60.471 55.000 9.46 0.00 0.00 3.02
110 111 0.396811 AAGTTCACCGGAGACCCAAG 59.603 55.000 9.46 0.00 0.00 3.61
111 112 0.107831 CAAGTTCACCGGAGACCCAA 59.892 55.000 9.46 0.00 0.00 4.12
112 113 1.752198 CAAGTTCACCGGAGACCCA 59.248 57.895 9.46 0.00 0.00 4.51
113 114 1.003718 CCAAGTTCACCGGAGACCC 60.004 63.158 9.46 0.00 0.00 4.46
114 115 0.602905 CACCAAGTTCACCGGAGACC 60.603 60.000 9.46 0.00 0.00 3.85
115 116 0.391597 TCACCAAGTTCACCGGAGAC 59.608 55.000 9.46 3.12 0.00 3.36
116 117 1.275291 GATCACCAAGTTCACCGGAGA 59.725 52.381 9.46 1.33 0.00 3.71
117 118 1.676014 GGATCACCAAGTTCACCGGAG 60.676 57.143 9.46 0.00 35.97 4.63
118 119 0.323629 GGATCACCAAGTTCACCGGA 59.676 55.000 9.46 0.00 35.97 5.14
119 120 0.676782 GGGATCACCAAGTTCACCGG 60.677 60.000 0.00 0.00 39.85 5.28
120 121 0.324943 AGGGATCACCAAGTTCACCG 59.675 55.000 0.00 0.00 43.89 4.94
121 122 1.340114 GGAGGGATCACCAAGTTCACC 60.340 57.143 0.00 0.00 43.89 4.02
122 123 1.676014 CGGAGGGATCACCAAGTTCAC 60.676 57.143 0.00 0.00 43.89 3.18
123 124 0.613260 CGGAGGGATCACCAAGTTCA 59.387 55.000 0.00 0.00 43.89 3.18
124 125 0.902531 TCGGAGGGATCACCAAGTTC 59.097 55.000 0.00 0.00 43.89 3.01
125 126 0.905357 CTCGGAGGGATCACCAAGTT 59.095 55.000 0.00 0.00 43.89 2.66
126 127 1.617947 GCTCGGAGGGATCACCAAGT 61.618 60.000 7.20 0.00 43.89 3.16
127 128 1.144936 GCTCGGAGGGATCACCAAG 59.855 63.158 7.20 0.00 43.89 3.61
128 129 0.909610 AAGCTCGGAGGGATCACCAA 60.910 55.000 7.20 0.00 43.89 3.67
129 130 1.306141 AAGCTCGGAGGGATCACCA 60.306 57.895 7.20 0.00 43.89 4.17
130 131 1.443828 GAAGCTCGGAGGGATCACC 59.556 63.158 7.20 0.00 40.67 4.02
131 132 1.045911 AGGAAGCTCGGAGGGATCAC 61.046 60.000 7.20 0.00 0.00 3.06
132 133 0.757188 GAGGAAGCTCGGAGGGATCA 60.757 60.000 7.20 0.00 0.00 2.92
133 134 1.801309 CGAGGAAGCTCGGAGGGATC 61.801 65.000 7.20 0.00 42.51 3.36
134 135 1.830408 CGAGGAAGCTCGGAGGGAT 60.830 63.158 7.20 0.00 42.51 3.85
135 136 2.440430 CGAGGAAGCTCGGAGGGA 60.440 66.667 7.20 0.00 42.51 4.20
136 137 2.440430 TCGAGGAAGCTCGGAGGG 60.440 66.667 7.20 0.00 45.82 4.30
137 138 1.452289 TCTCGAGGAAGCTCGGAGG 60.452 63.158 13.56 0.00 45.82 4.30
138 139 1.725066 GTCTCGAGGAAGCTCGGAG 59.275 63.158 13.56 0.00 45.82 4.63
139 140 2.107292 CGTCTCGAGGAAGCTCGGA 61.107 63.158 13.56 0.00 45.82 4.55
140 141 1.440938 ATCGTCTCGAGGAAGCTCGG 61.441 60.000 13.56 0.00 45.82 4.63
142 143 1.263217 GAGATCGTCTCGAGGAAGCTC 59.737 57.143 13.56 11.70 39.91 4.09
143 144 1.305201 GAGATCGTCTCGAGGAAGCT 58.695 55.000 13.56 6.35 39.91 3.74
144 145 3.837669 GAGATCGTCTCGAGGAAGC 57.162 57.895 13.56 1.09 39.91 3.86
148 149 7.921139 AGGTACTTCAGAGATCGTCTCGAGG 62.921 52.000 13.56 0.00 42.52 4.63
149 150 4.976281 AGGTACTTCAGAGATCGTCTCGAG 60.976 50.000 5.93 5.93 42.52 4.04
150 151 3.118702 AGGTACTTCAGAGATCGTCTCGA 60.119 47.826 8.66 0.00 42.52 4.04
151 152 3.199677 AGGTACTTCAGAGATCGTCTCG 58.800 50.000 8.66 5.48 42.52 4.04
152 153 6.050432 TCTTAGGTACTTCAGAGATCGTCTC 58.950 44.000 6.85 6.85 41.35 3.36
153 154 5.991861 TCTTAGGTACTTCAGAGATCGTCT 58.008 41.667 0.00 0.00 41.75 4.18
154 155 6.680874 TTCTTAGGTACTTCAGAGATCGTC 57.319 41.667 0.00 0.00 41.75 4.20
155 156 6.460399 GCATTCTTAGGTACTTCAGAGATCGT 60.460 42.308 0.00 0.00 41.75 3.73
156 157 5.918011 GCATTCTTAGGTACTTCAGAGATCG 59.082 44.000 0.00 0.00 41.75 3.69
157 158 6.810911 TGCATTCTTAGGTACTTCAGAGATC 58.189 40.000 0.00 0.00 41.75 2.75
158 159 6.798427 TGCATTCTTAGGTACTTCAGAGAT 57.202 37.500 0.00 0.00 41.75 2.75
159 160 6.798427 ATGCATTCTTAGGTACTTCAGAGA 57.202 37.500 0.00 0.00 41.75 3.10
160 161 7.168302 CGTTATGCATTCTTAGGTACTTCAGAG 59.832 40.741 3.54 0.00 41.75 3.35
161 162 6.978659 CGTTATGCATTCTTAGGTACTTCAGA 59.021 38.462 3.54 0.00 41.75 3.27
162 163 6.757010 ACGTTATGCATTCTTAGGTACTTCAG 59.243 38.462 3.54 0.00 41.75 3.02
163 164 6.533723 CACGTTATGCATTCTTAGGTACTTCA 59.466 38.462 3.54 0.00 41.75 3.02
164 165 6.934210 CACGTTATGCATTCTTAGGTACTTC 58.066 40.000 3.54 0.00 41.75 3.01
165 166 6.903883 CACGTTATGCATTCTTAGGTACTT 57.096 37.500 3.54 0.00 41.75 2.24
180 181 2.091541 ACCTCAAATGGGCACGTTATG 58.908 47.619 0.00 0.00 0.00 1.90
181 182 2.507407 ACCTCAAATGGGCACGTTAT 57.493 45.000 0.00 0.00 0.00 1.89
182 183 2.937873 GCTACCTCAAATGGGCACGTTA 60.938 50.000 0.00 0.00 0.00 3.18
183 184 1.821216 CTACCTCAAATGGGCACGTT 58.179 50.000 0.00 0.00 0.00 3.99
184 185 0.676782 GCTACCTCAAATGGGCACGT 60.677 55.000 0.00 0.00 0.00 4.49
185 186 1.705337 CGCTACCTCAAATGGGCACG 61.705 60.000 0.00 0.00 0.00 5.34
186 187 0.676782 ACGCTACCTCAAATGGGCAC 60.677 55.000 0.00 0.00 0.00 5.01
187 188 0.392461 GACGCTACCTCAAATGGGCA 60.392 55.000 0.00 0.00 0.00 5.36
188 189 1.095807 GGACGCTACCTCAAATGGGC 61.096 60.000 0.00 0.00 0.00 5.36
189 190 0.810031 CGGACGCTACCTCAAATGGG 60.810 60.000 0.00 0.00 0.00 4.00
190 191 0.174845 TCGGACGCTACCTCAAATGG 59.825 55.000 0.00 0.00 0.00 3.16
191 192 1.135083 AGTCGGACGCTACCTCAAATG 60.135 52.381 1.89 0.00 0.00 2.32
192 193 1.134560 GAGTCGGACGCTACCTCAAAT 59.865 52.381 4.53 0.00 0.00 2.32
193 194 0.524862 GAGTCGGACGCTACCTCAAA 59.475 55.000 4.53 0.00 0.00 2.69
194 195 0.322277 AGAGTCGGACGCTACCTCAA 60.322 55.000 12.88 0.00 0.00 3.02
195 196 0.743701 GAGAGTCGGACGCTACCTCA 60.744 60.000 14.46 0.00 0.00 3.86
196 197 1.764180 CGAGAGTCGGACGCTACCTC 61.764 65.000 14.46 9.96 36.00 3.85
197 198 1.814586 CGAGAGTCGGACGCTACCT 60.815 63.158 14.46 2.54 36.00 3.08
198 199 1.364626 TTCGAGAGTCGGACGCTACC 61.365 60.000 14.46 2.69 40.88 3.18
199 200 0.656785 ATTCGAGAGTCGGACGCTAC 59.343 55.000 14.46 7.62 40.88 3.58
200 201 0.656259 CATTCGAGAGTCGGACGCTA 59.344 55.000 14.46 0.00 40.88 4.26
201 202 1.025113 TCATTCGAGAGTCGGACGCT 61.025 55.000 14.38 14.38 40.88 5.07
202 203 0.179171 TTCATTCGAGAGTCGGACGC 60.179 55.000 3.49 3.49 40.88 5.19
203 204 2.476873 ATTCATTCGAGAGTCGGACG 57.523 50.000 1.89 0.00 40.88 4.79
204 205 4.174009 TCAAATTCATTCGAGAGTCGGAC 58.826 43.478 0.00 0.00 40.88 4.79
205 206 4.082190 ACTCAAATTCATTCGAGAGTCGGA 60.082 41.667 0.00 0.00 40.88 4.55
206 207 4.032217 CACTCAAATTCATTCGAGAGTCGG 59.968 45.833 0.00 0.00 40.88 4.79
207 208 4.032217 CCACTCAAATTCATTCGAGAGTCG 59.968 45.833 0.00 0.00 42.10 4.18
208 209 5.171476 TCCACTCAAATTCATTCGAGAGTC 58.829 41.667 0.00 0.00 34.39 3.36
209 210 5.152623 TCCACTCAAATTCATTCGAGAGT 57.847 39.130 0.00 0.00 36.84 3.24
210 211 4.033817 GCTCCACTCAAATTCATTCGAGAG 59.966 45.833 0.00 0.00 0.00 3.20
211 212 3.935203 GCTCCACTCAAATTCATTCGAGA 59.065 43.478 0.00 0.00 0.00 4.04
212 213 3.937706 AGCTCCACTCAAATTCATTCGAG 59.062 43.478 0.00 0.00 0.00 4.04
213 214 3.935203 GAGCTCCACTCAAATTCATTCGA 59.065 43.478 0.87 0.00 45.49 3.71
214 215 3.242220 CGAGCTCCACTCAAATTCATTCG 60.242 47.826 8.47 0.00 46.63 3.34
215 216 3.935203 TCGAGCTCCACTCAAATTCATTC 59.065 43.478 8.47 0.00 46.63 2.67
216 217 3.942829 TCGAGCTCCACTCAAATTCATT 58.057 40.909 8.47 0.00 46.63 2.57
217 218 3.616956 TCGAGCTCCACTCAAATTCAT 57.383 42.857 8.47 0.00 46.63 2.57
218 219 3.006859 TCTTCGAGCTCCACTCAAATTCA 59.993 43.478 8.47 0.00 46.63 2.57
219 220 3.589988 TCTTCGAGCTCCACTCAAATTC 58.410 45.455 8.47 0.00 46.63 2.17
220 221 3.594134 CTCTTCGAGCTCCACTCAAATT 58.406 45.455 8.47 0.00 46.63 1.82
221 222 2.093764 CCTCTTCGAGCTCCACTCAAAT 60.094 50.000 8.47 0.00 46.63 2.32
222 223 1.273606 CCTCTTCGAGCTCCACTCAAA 59.726 52.381 8.47 0.00 46.63 2.69
223 224 0.891373 CCTCTTCGAGCTCCACTCAA 59.109 55.000 8.47 0.00 46.63 3.02
224 225 0.038310 TCCTCTTCGAGCTCCACTCA 59.962 55.000 8.47 0.00 46.63 3.41
225 226 1.134175 CTTCCTCTTCGAGCTCCACTC 59.866 57.143 8.47 0.00 42.47 3.51
226 227 1.181786 CTTCCTCTTCGAGCTCCACT 58.818 55.000 8.47 0.00 0.00 4.00
227 228 0.174617 CCTTCCTCTTCGAGCTCCAC 59.825 60.000 8.47 0.00 0.00 4.02
228 229 0.039764 TCCTTCCTCTTCGAGCTCCA 59.960 55.000 8.47 0.00 0.00 3.86
229 230 0.744281 CTCCTTCCTCTTCGAGCTCC 59.256 60.000 8.47 0.00 0.00 4.70
230 231 1.470051 ACTCCTTCCTCTTCGAGCTC 58.530 55.000 2.73 2.73 0.00 4.09
231 232 1.822371 GAACTCCTTCCTCTTCGAGCT 59.178 52.381 0.00 0.00 0.00 4.09
232 233 1.546476 TGAACTCCTTCCTCTTCGAGC 59.454 52.381 0.00 0.00 0.00 5.03
233 234 2.094442 GGTGAACTCCTTCCTCTTCGAG 60.094 54.545 0.00 0.00 0.00 4.04
234 235 1.893801 GGTGAACTCCTTCCTCTTCGA 59.106 52.381 0.00 0.00 0.00 3.71
235 236 1.896465 AGGTGAACTCCTTCCTCTTCG 59.104 52.381 0.00 0.00 33.52 3.79
236 237 2.094442 CGAGGTGAACTCCTTCCTCTTC 60.094 54.545 8.16 0.00 43.57 2.87
237 238 1.896465 CGAGGTGAACTCCTTCCTCTT 59.104 52.381 8.16 0.00 43.57 2.85
238 239 1.203075 ACGAGGTGAACTCCTTCCTCT 60.203 52.381 8.16 0.00 43.57 3.69
239 240 1.258676 ACGAGGTGAACTCCTTCCTC 58.741 55.000 0.00 0.00 43.57 3.71
240 241 1.619332 GAACGAGGTGAACTCCTTCCT 59.381 52.381 0.00 0.00 43.57 3.36
241 242 1.337917 GGAACGAGGTGAACTCCTTCC 60.338 57.143 11.57 11.57 46.71 3.46
242 243 1.337917 GGGAACGAGGTGAACTCCTTC 60.338 57.143 1.27 1.27 43.57 3.46
243 244 0.685660 GGGAACGAGGTGAACTCCTT 59.314 55.000 0.00 0.00 43.57 3.36
244 245 2.363297 GGGAACGAGGTGAACTCCT 58.637 57.895 0.00 0.00 43.57 3.69
270 271 3.832171 GACAAGAGCTCGCGCACG 61.832 66.667 8.75 0.00 39.10 5.34
271 272 3.482783 GGACAAGAGCTCGCGCAC 61.483 66.667 8.75 0.00 39.10 5.34
272 273 3.989787 TGGACAAGAGCTCGCGCA 61.990 61.111 8.75 0.00 39.10 6.09
273 274 3.482783 GTGGACAAGAGCTCGCGC 61.483 66.667 8.37 0.00 0.00 6.86
274 275 3.175240 CGTGGACAAGAGCTCGCG 61.175 66.667 8.37 0.00 0.00 5.87
275 276 2.811317 CCGTGGACAAGAGCTCGC 60.811 66.667 8.37 0.00 0.00 5.03
276 277 1.444553 GACCGTGGACAAGAGCTCG 60.445 63.158 8.37 0.00 0.00 5.03
277 278 1.079750 GGACCGTGGACAAGAGCTC 60.080 63.158 5.27 5.27 0.00 4.09
278 279 1.534235 AGGACCGTGGACAAGAGCT 60.534 57.895 0.00 0.00 0.00 4.09
279 280 1.079750 GAGGACCGTGGACAAGAGC 60.080 63.158 0.00 0.00 0.00 4.09
280 281 1.213013 CGAGGACCGTGGACAAGAG 59.787 63.158 0.00 0.00 0.00 2.85
281 282 2.927580 GCGAGGACCGTGGACAAGA 61.928 63.158 0.00 0.00 41.15 3.02
282 283 2.432628 GCGAGGACCGTGGACAAG 60.433 66.667 0.00 0.00 41.15 3.16
283 284 3.998672 GGCGAGGACCGTGGACAA 61.999 66.667 0.00 0.00 41.15 3.18
304 305 1.868997 GTCACACCATCACCGCAAG 59.131 57.895 0.00 0.00 0.00 4.01
305 306 1.958715 CGTCACACCATCACCGCAA 60.959 57.895 0.00 0.00 0.00 4.85
306 307 2.356913 CGTCACACCATCACCGCA 60.357 61.111 0.00 0.00 0.00 5.69
307 308 2.357034 ACGTCACACCATCACCGC 60.357 61.111 0.00 0.00 0.00 5.68
308 309 2.667318 GCACGTCACACCATCACCG 61.667 63.158 0.00 0.00 0.00 4.94
309 310 0.955428 ATGCACGTCACACCATCACC 60.955 55.000 0.00 0.00 0.00 4.02
310 311 0.166597 CATGCACGTCACACCATCAC 59.833 55.000 0.00 0.00 0.00 3.06
311 312 0.954938 CCATGCACGTCACACCATCA 60.955 55.000 0.00 0.00 0.00 3.07
312 313 0.955428 ACCATGCACGTCACACCATC 60.955 55.000 0.00 0.00 0.00 3.51
313 314 1.073025 ACCATGCACGTCACACCAT 59.927 52.632 0.00 0.00 0.00 3.55
314 315 1.891449 CACCATGCACGTCACACCA 60.891 57.895 0.00 0.00 0.00 4.17
315 316 0.955428 ATCACCATGCACGTCACACC 60.955 55.000 0.00 0.00 0.00 4.16
316 317 0.166597 CATCACCATGCACGTCACAC 59.833 55.000 0.00 0.00 0.00 3.82
317 318 0.954938 CCATCACCATGCACGTCACA 60.955 55.000 0.00 0.00 0.00 3.58
318 319 0.955428 ACCATCACCATGCACGTCAC 60.955 55.000 0.00 0.00 0.00 3.67
319 320 0.673333 GACCATCACCATGCACGTCA 60.673 55.000 0.00 0.00 0.00 4.35
320 321 1.695893 CGACCATCACCATGCACGTC 61.696 60.000 0.00 0.00 0.00 4.34
321 322 1.741401 CGACCATCACCATGCACGT 60.741 57.895 0.00 0.00 0.00 4.49
322 323 1.423721 CTCGACCATCACCATGCACG 61.424 60.000 0.00 0.00 0.00 5.34
323 324 1.091771 CCTCGACCATCACCATGCAC 61.092 60.000 0.00 0.00 0.00 4.57
324 325 1.221566 CCTCGACCATCACCATGCA 59.778 57.895 0.00 0.00 0.00 3.96
325 326 1.524621 CCCTCGACCATCACCATGC 60.525 63.158 0.00 0.00 0.00 4.06
326 327 0.761187 ATCCCTCGACCATCACCATG 59.239 55.000 0.00 0.00 0.00 3.66
327 328 0.761187 CATCCCTCGACCATCACCAT 59.239 55.000 0.00 0.00 0.00 3.55
328 329 1.971505 GCATCCCTCGACCATCACCA 61.972 60.000 0.00 0.00 0.00 4.17
329 330 1.227674 GCATCCCTCGACCATCACC 60.228 63.158 0.00 0.00 0.00 4.02
330 331 0.249657 GAGCATCCCTCGACCATCAC 60.250 60.000 0.00 0.00 0.00 3.06
331 332 2.127839 GAGCATCCCTCGACCATCA 58.872 57.895 0.00 0.00 0.00 3.07
347 348 4.872691 ACAAATAGAGTTCTTGATGCGGAG 59.127 41.667 0.00 0.00 0.00 4.63
348 349 4.832248 ACAAATAGAGTTCTTGATGCGGA 58.168 39.130 0.00 0.00 0.00 5.54
349 350 5.551760 AACAAATAGAGTTCTTGATGCGG 57.448 39.130 0.00 0.00 0.00 5.69
350 351 7.858052 AAAAACAAATAGAGTTCTTGATGCG 57.142 32.000 0.00 0.00 0.00 4.73
351 352 9.899226 AGTAAAAACAAATAGAGTTCTTGATGC 57.101 29.630 0.00 0.00 0.00 3.91
356 357 9.233232 CGCAAAGTAAAAACAAATAGAGTTCTT 57.767 29.630 0.00 0.00 0.00 2.52
357 358 8.403236 ACGCAAAGTAAAAACAAATAGAGTTCT 58.597 29.630 0.00 0.00 0.00 3.01
358 359 8.469125 CACGCAAAGTAAAAACAAATAGAGTTC 58.531 33.333 0.00 0.00 0.00 3.01
359 360 7.971722 ACACGCAAAGTAAAAACAAATAGAGTT 59.028 29.630 0.00 0.00 0.00 3.01
360 361 7.477494 ACACGCAAAGTAAAAACAAATAGAGT 58.523 30.769 0.00 0.00 0.00 3.24
361 362 7.908193 ACACGCAAAGTAAAAACAAATAGAG 57.092 32.000 0.00 0.00 0.00 2.43
362 363 8.614346 AGTACACGCAAAGTAAAAACAAATAGA 58.386 29.630 0.00 0.00 0.00 1.98
363 364 8.776680 AGTACACGCAAAGTAAAAACAAATAG 57.223 30.769 0.00 0.00 0.00 1.73
364 365 8.614346 AGAGTACACGCAAAGTAAAAACAAATA 58.386 29.630 0.00 0.00 0.00 1.40
365 366 7.477494 AGAGTACACGCAAAGTAAAAACAAAT 58.523 30.769 0.00 0.00 0.00 2.32
366 367 6.844254 AGAGTACACGCAAAGTAAAAACAAA 58.156 32.000 0.00 0.00 0.00 2.83
367 368 6.425577 AGAGTACACGCAAAGTAAAAACAA 57.574 33.333 0.00 0.00 0.00 2.83
368 369 6.252281 CAAGAGTACACGCAAAGTAAAAACA 58.748 36.000 0.00 0.00 0.00 2.83
369 370 5.170803 GCAAGAGTACACGCAAAGTAAAAAC 59.829 40.000 0.00 0.00 0.00 2.43
370 371 5.065474 AGCAAGAGTACACGCAAAGTAAAAA 59.935 36.000 0.00 0.00 0.00 1.94
371 372 4.573201 AGCAAGAGTACACGCAAAGTAAAA 59.427 37.500 0.00 0.00 0.00 1.52
372 373 4.124238 AGCAAGAGTACACGCAAAGTAAA 58.876 39.130 0.00 0.00 0.00 2.01
373 374 3.724374 AGCAAGAGTACACGCAAAGTAA 58.276 40.909 0.00 0.00 0.00 2.24
374 375 3.243602 TGAGCAAGAGTACACGCAAAGTA 60.244 43.478 0.00 0.00 0.00 2.24
375 376 2.135933 GAGCAAGAGTACACGCAAAGT 58.864 47.619 0.00 0.00 0.00 2.66
376 377 2.096713 GTGAGCAAGAGTACACGCAAAG 60.097 50.000 0.00 0.00 0.00 2.77
377 378 1.864711 GTGAGCAAGAGTACACGCAAA 59.135 47.619 0.00 0.00 0.00 3.68
378 379 1.202475 TGTGAGCAAGAGTACACGCAA 60.202 47.619 0.00 0.00 36.25 4.85
379 380 0.387565 TGTGAGCAAGAGTACACGCA 59.612 50.000 0.00 0.00 36.25 5.24
380 381 1.656095 GATGTGAGCAAGAGTACACGC 59.344 52.381 0.00 0.00 36.25 5.34
381 382 1.914051 CGATGTGAGCAAGAGTACACG 59.086 52.381 0.00 0.00 36.25 4.49
382 383 2.947852 ACGATGTGAGCAAGAGTACAC 58.052 47.619 0.00 0.00 0.00 2.90
383 384 3.255888 AGAACGATGTGAGCAAGAGTACA 59.744 43.478 0.00 0.00 0.00 2.90
384 385 3.839293 AGAACGATGTGAGCAAGAGTAC 58.161 45.455 0.00 0.00 0.00 2.73
385 386 3.759086 AGAGAACGATGTGAGCAAGAGTA 59.241 43.478 0.00 0.00 0.00 2.59
386 387 2.560542 AGAGAACGATGTGAGCAAGAGT 59.439 45.455 0.00 0.00 0.00 3.24
387 388 3.178267 GAGAGAACGATGTGAGCAAGAG 58.822 50.000 0.00 0.00 0.00 2.85
388 389 2.414691 CGAGAGAACGATGTGAGCAAGA 60.415 50.000 0.00 0.00 35.09 3.02
389 390 1.916651 CGAGAGAACGATGTGAGCAAG 59.083 52.381 0.00 0.00 35.09 4.01
390 391 1.269723 ACGAGAGAACGATGTGAGCAA 59.730 47.619 0.00 0.00 37.03 3.91
391 392 0.881796 ACGAGAGAACGATGTGAGCA 59.118 50.000 0.00 0.00 37.03 4.26
392 393 1.914700 GAACGAGAGAACGATGTGAGC 59.085 52.381 0.00 0.00 37.03 4.26
393 394 3.167425 CAGAACGAGAGAACGATGTGAG 58.833 50.000 0.00 0.00 32.94 3.51
394 395 2.668556 GCAGAACGAGAGAACGATGTGA 60.669 50.000 0.00 0.00 32.94 3.58
395 396 1.651138 GCAGAACGAGAGAACGATGTG 59.349 52.381 0.00 0.00 37.03 3.21
396 397 1.402984 GGCAGAACGAGAGAACGATGT 60.403 52.381 0.00 0.00 37.03 3.06
397 398 1.272781 GGCAGAACGAGAGAACGATG 58.727 55.000 0.00 0.00 37.03 3.84
398 399 0.888619 TGGCAGAACGAGAGAACGAT 59.111 50.000 0.00 0.00 37.03 3.73
399 400 0.039437 GTGGCAGAACGAGAGAACGA 60.039 55.000 0.00 0.00 37.03 3.85
400 401 0.318699 TGTGGCAGAACGAGAGAACG 60.319 55.000 0.00 0.00 39.31 3.95
401 402 1.996191 GATGTGGCAGAACGAGAGAAC 59.004 52.381 0.00 0.00 0.00 3.01
402 403 1.618343 TGATGTGGCAGAACGAGAGAA 59.382 47.619 0.00 0.00 0.00 2.87
403 404 1.203287 CTGATGTGGCAGAACGAGAGA 59.797 52.381 0.00 0.00 38.14 3.10
404 405 1.638133 CTGATGTGGCAGAACGAGAG 58.362 55.000 0.00 0.00 38.14 3.20
405 406 0.390340 GCTGATGTGGCAGAACGAGA 60.390 55.000 0.00 0.00 38.14 4.04
406 407 1.364626 GGCTGATGTGGCAGAACGAG 61.365 60.000 0.00 0.00 38.14 4.18
407 408 1.375908 GGCTGATGTGGCAGAACGA 60.376 57.895 0.00 0.00 38.14 3.85
408 409 1.376424 AGGCTGATGTGGCAGAACG 60.376 57.895 0.00 0.00 38.14 3.95
409 410 0.607489 ACAGGCTGATGTGGCAGAAC 60.607 55.000 23.66 0.00 38.14 3.01
410 411 0.111061 AACAGGCTGATGTGGCAGAA 59.889 50.000 23.66 0.00 38.14 3.02
411 412 0.607217 CAACAGGCTGATGTGGCAGA 60.607 55.000 23.66 0.00 38.14 4.26
412 413 1.592400 CCAACAGGCTGATGTGGCAG 61.592 60.000 23.66 2.41 38.91 4.85
413 414 1.604308 CCAACAGGCTGATGTGGCA 60.604 57.895 23.66 0.00 32.52 4.92
414 415 2.998279 GCCAACAGGCTGATGTGGC 61.998 63.158 30.71 30.71 45.21 5.01
415 416 3.281240 GCCAACAGGCTGATGTGG 58.719 61.111 23.66 23.45 45.21 4.17
424 425 0.963962 ACAGAAAGCATGCCAACAGG 59.036 50.000 15.66 2.55 0.00 4.00
425 426 1.610038 TCACAGAAAGCATGCCAACAG 59.390 47.619 15.66 4.72 0.00 3.16
426 427 1.337703 GTCACAGAAAGCATGCCAACA 59.662 47.619 15.66 0.00 0.00 3.33
427 428 1.337703 TGTCACAGAAAGCATGCCAAC 59.662 47.619 15.66 5.77 0.00 3.77
428 429 1.337703 GTGTCACAGAAAGCATGCCAA 59.662 47.619 15.66 0.00 0.00 4.52
429 430 0.953727 GTGTCACAGAAAGCATGCCA 59.046 50.000 15.66 0.00 0.00 4.92
430 431 1.242076 AGTGTCACAGAAAGCATGCC 58.758 50.000 15.66 0.00 0.00 4.40
431 432 2.033801 ACAAGTGTCACAGAAAGCATGC 59.966 45.455 10.51 10.51 0.00 4.06
432 433 3.304257 GGACAAGTGTCACAGAAAGCATG 60.304 47.826 13.21 0.00 46.47 4.06
433 434 2.880890 GGACAAGTGTCACAGAAAGCAT 59.119 45.455 13.21 0.00 46.47 3.79
434 435 2.288666 GGACAAGTGTCACAGAAAGCA 58.711 47.619 13.21 0.00 46.47 3.91
435 436 1.261619 CGGACAAGTGTCACAGAAAGC 59.738 52.381 13.21 0.00 46.47 3.51
436 437 2.550978 ACGGACAAGTGTCACAGAAAG 58.449 47.619 13.21 0.00 46.47 2.62
437 438 2.684001 ACGGACAAGTGTCACAGAAA 57.316 45.000 13.21 0.00 46.47 2.52
438 439 3.131577 ACTTACGGACAAGTGTCACAGAA 59.868 43.478 13.21 1.58 46.47 3.02
439 440 2.691526 ACTTACGGACAAGTGTCACAGA 59.308 45.455 13.21 0.00 46.47 3.41
440 441 2.794910 CACTTACGGACAAGTGTCACAG 59.205 50.000 13.21 6.53 46.75 3.66
441 442 2.816689 CACTTACGGACAAGTGTCACA 58.183 47.619 13.21 0.00 46.75 3.58
447 448 4.612264 AATGTACCACTTACGGACAAGT 57.388 40.909 0.00 0.00 39.34 3.16
448 449 4.992319 TCAAATGTACCACTTACGGACAAG 59.008 41.667 0.00 0.00 32.71 3.16
449 450 4.958509 TCAAATGTACCACTTACGGACAA 58.041 39.130 0.00 0.00 32.71 3.18
450 451 4.039488 ACTCAAATGTACCACTTACGGACA 59.961 41.667 0.00 0.00 32.71 4.02
451 452 4.563061 ACTCAAATGTACCACTTACGGAC 58.437 43.478 0.00 0.00 32.71 4.79
452 453 4.877378 ACTCAAATGTACCACTTACGGA 57.123 40.909 0.00 0.00 32.71 4.69
453 454 4.992319 TGAACTCAAATGTACCACTTACGG 59.008 41.667 0.00 0.00 32.71 4.02
454 455 5.107220 GGTGAACTCAAATGTACCACTTACG 60.107 44.000 0.00 0.00 32.71 3.18
455 456 5.761234 TGGTGAACTCAAATGTACCACTTAC 59.239 40.000 0.00 0.00 33.60 2.34
456 457 5.931294 TGGTGAACTCAAATGTACCACTTA 58.069 37.500 0.00 0.00 33.60 2.24
457 458 4.787551 TGGTGAACTCAAATGTACCACTT 58.212 39.130 0.00 0.00 33.60 3.16
458 459 4.431416 TGGTGAACTCAAATGTACCACT 57.569 40.909 0.00 0.00 33.60 4.00
459 460 4.142902 CGATGGTGAACTCAAATGTACCAC 60.143 45.833 0.00 0.00 40.60 4.16
460 461 4.000325 CGATGGTGAACTCAAATGTACCA 59.000 43.478 0.00 0.00 41.85 3.25
461 462 4.000988 ACGATGGTGAACTCAAATGTACC 58.999 43.478 0.00 0.00 0.00 3.34
462 463 6.903883 ATACGATGGTGAACTCAAATGTAC 57.096 37.500 0.00 0.00 0.00 2.90
463 464 7.548967 TGTATACGATGGTGAACTCAAATGTA 58.451 34.615 0.00 0.00 0.00 2.29
464 465 6.403049 TGTATACGATGGTGAACTCAAATGT 58.597 36.000 0.00 0.00 0.00 2.71
465 466 6.902224 TGTATACGATGGTGAACTCAAATG 57.098 37.500 0.00 0.00 0.00 2.32
466 467 8.638873 TCTATGTATACGATGGTGAACTCAAAT 58.361 33.333 0.00 0.00 0.00 2.32
467 468 7.919091 GTCTATGTATACGATGGTGAACTCAAA 59.081 37.037 0.00 0.00 0.00 2.69
468 469 7.284716 AGTCTATGTATACGATGGTGAACTCAA 59.715 37.037 0.00 0.00 0.00 3.02
469 470 6.771267 AGTCTATGTATACGATGGTGAACTCA 59.229 38.462 0.00 0.00 0.00 3.41
470 471 7.204496 AGTCTATGTATACGATGGTGAACTC 57.796 40.000 0.00 0.00 0.00 3.01
471 472 8.687292 TTAGTCTATGTATACGATGGTGAACT 57.313 34.615 0.00 0.00 0.00 3.01
474 475 9.955102 ACTATTAGTCTATGTATACGATGGTGA 57.045 33.333 0.00 0.00 0.00 4.02
492 493 9.929180 CCTGCATATACACATGTAACTATTAGT 57.071 33.333 0.00 0.00 33.76 2.24
493 494 9.929180 ACCTGCATATACACATGTAACTATTAG 57.071 33.333 0.00 0.00 33.76 1.73
494 495 9.923143 GACCTGCATATACACATGTAACTATTA 57.077 33.333 0.00 0.00 33.76 0.98
495 496 8.428852 TGACCTGCATATACACATGTAACTATT 58.571 33.333 0.00 0.00 33.76 1.73
496 497 7.962441 TGACCTGCATATACACATGTAACTAT 58.038 34.615 0.00 0.00 33.76 2.12
497 498 7.354751 TGACCTGCATATACACATGTAACTA 57.645 36.000 0.00 0.00 33.76 2.24
509 510 7.013559 CCATTGATTTCTGTTGACCTGCATATA 59.986 37.037 0.00 0.00 0.00 0.86
539 540 6.147821 CCGGATTGATTAGATGTTATGGACAC 59.852 42.308 0.00 0.00 42.04 3.67
560 561 8.352137 TCGAGTAAATAAATGTATATCCCGGA 57.648 34.615 0.73 0.00 0.00 5.14
655 658 3.058224 ACAAGAAGCAAATAAGTCGCCAC 60.058 43.478 0.00 0.00 0.00 5.01
659 662 6.430451 ACTGAAACAAGAAGCAAATAAGTCG 58.570 36.000 0.00 0.00 0.00 4.18
799 935 7.442656 GGATTCTGATCGTCTAGGGAATAAAA 58.557 38.462 0.00 0.00 32.84 1.52
824 963 8.037382 TGTATAGATCTTAACCGATCCTAACG 57.963 38.462 0.00 0.00 40.50 3.18
872 1011 7.538575 GGATAGTAATTGTGCAAATCTTGTGT 58.461 34.615 0.00 0.00 0.00 3.72
905 1235 2.597305 CGTACGCTAGTGGAACAACATC 59.403 50.000 0.52 0.00 44.16 3.06
942 1312 3.385111 GCGATGGACCTCCTTATATAGGG 59.615 52.174 4.49 4.49 44.86 3.53
1052 1449 4.745751 CGAGCGCCCCCAACGTAA 62.746 66.667 2.29 0.00 0.00 3.18
1070 1467 1.747355 CCTTGTCCTTGATGTCCATGC 59.253 52.381 0.00 0.00 0.00 4.06
1359 1757 1.282248 CGTTGATGGCGTCGTCTGTT 61.282 55.000 11.10 0.00 0.00 3.16
1521 1934 1.299620 CAACGACGTCAGGTTCCGT 60.300 57.895 17.16 3.09 40.54 4.69
1625 2038 2.587753 TTTCGATGCCGCCCGATC 60.588 61.111 5.91 0.00 34.58 3.69
1754 2170 4.025401 GCTCCAACGCAACCACCG 62.025 66.667 0.00 0.00 0.00 4.94
2051 2475 1.681327 ACTGGGTATGACGCGTCCT 60.681 57.895 34.34 27.40 33.25 3.85
2110 2535 6.207417 GGCTACCTATACACAGACCGTTAATA 59.793 42.308 0.00 0.00 0.00 0.98
2263 2689 8.859156 GTGTTGTGTTTTAATAGCCATACAATG 58.141 33.333 0.00 0.00 0.00 2.82
2321 2765 8.498054 TCAAAATTGGATGATAGAGACAAGTC 57.502 34.615 0.00 0.00 0.00 3.01
2444 2889 8.519526 TCCTTATTTGGTGTTGTGCTTTAATAG 58.480 33.333 0.00 0.00 0.00 1.73
2445 2890 8.410673 TCCTTATTTGGTGTTGTGCTTTAATA 57.589 30.769 0.00 0.00 0.00 0.98
2446 2891 7.296628 TCCTTATTTGGTGTTGTGCTTTAAT 57.703 32.000 0.00 0.00 0.00 1.40
2452 2897 5.195001 TCTTTCCTTATTTGGTGTTGTGC 57.805 39.130 0.00 0.00 0.00 4.57
2583 3028 9.959749 AGCGATACAATTCTTTTTCTTGTTTTA 57.040 25.926 0.00 0.00 35.00 1.52
2584 3029 8.871686 AGCGATACAATTCTTTTTCTTGTTTT 57.128 26.923 0.00 0.00 35.00 2.43
2596 3041 9.769093 GTTGTGTTTTAATAGCGATACAATTCT 57.231 29.630 0.00 0.00 0.00 2.40
2597 3042 9.549509 TGTTGTGTTTTAATAGCGATACAATTC 57.450 29.630 0.00 0.00 0.00 2.17
2598 3043 9.337091 GTGTTGTGTTTTAATAGCGATACAATT 57.663 29.630 0.00 0.00 0.00 2.32
2599 3044 7.966204 GGTGTTGTGTTTTAATAGCGATACAAT 59.034 33.333 0.00 0.00 0.00 2.71
2600 3045 7.041303 TGGTGTTGTGTTTTAATAGCGATACAA 60.041 33.333 0.00 0.00 0.00 2.41
2601 3046 6.427242 TGGTGTTGTGTTTTAATAGCGATACA 59.573 34.615 0.00 0.00 0.00 2.29
2602 3047 6.833839 TGGTGTTGTGTTTTAATAGCGATAC 58.166 36.000 0.00 0.00 0.00 2.24
2603 3048 7.436430 TTGGTGTTGTGTTTTAATAGCGATA 57.564 32.000 0.00 0.00 0.00 2.92
2604 3049 5.950758 TGGTGTTGTGTTTTAATAGCGAT 57.049 34.783 0.00 0.00 0.00 4.58
2605 3050 5.752892 TTGGTGTTGTGTTTTAATAGCGA 57.247 34.783 0.00 0.00 0.00 4.93
2606 3051 8.508800 TTATTTGGTGTTGTGTTTTAATAGCG 57.491 30.769 0.00 0.00 0.00 4.26
2607 3052 9.685828 TCTTATTTGGTGTTGTGTTTTAATAGC 57.314 29.630 0.00 0.00 0.00 2.97
2613 3058 9.665719 ATCTTTTCTTATTTGGTGTTGTGTTTT 57.334 25.926 0.00 0.00 0.00 2.43
2666 3111 9.791820 TGACAAGCAATCAAATTTGTATGATAG 57.208 29.630 21.78 14.64 35.29 2.08
2710 3155 9.806203 TTTGTTGTACTAGCATATATTGTACGT 57.194 29.630 0.00 0.00 37.04 3.57
2863 3308 5.927281 AGACGCCTAGGTCAAGTATTTAA 57.073 39.130 11.31 0.00 39.42 1.52
2923 3461 9.607988 TCATACACTATAAATTTACACCACCTG 57.392 33.333 0.00 0.00 0.00 4.00
2971 3511 7.870954 TGTTCTACAGTAGTGACCATTTTACTG 59.129 37.037 4.09 7.22 45.25 2.74
2989 3529 2.030007 GCCATTGCTTGCTTGTTCTACA 60.030 45.455 0.00 0.00 33.53 2.74
3018 3558 0.168788 CGCGACACAATTGAGCCATT 59.831 50.000 13.59 0.00 0.00 3.16
3068 3619 4.141914 GCCAGCCACTACTAATTGTCTACT 60.142 45.833 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.